BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041458
         (568 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
 gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  900 bits (2325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/568 (75%), Positives = 495/568 (87%), Gaps = 1/568 (0%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYT 60
           MA L++++S + +PSPE  RK  GF+SQ+PNLH+ SLNKGF RVLASTQ+TISPKD+V+T
Sbjct: 1   MAILVNAMSPITSPSPENARKVCGFFSQVPNLHTLSLNKGFSRVLASTQITISPKDNVFT 60

Query: 61  KPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
            PN + G N D R RD +LNDAFL LE M+ KGHKPD  QAT L+Y+LCK+NKM+KA KV
Sbjct: 61  LPNWRSGKN-DPRTRDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKV 119

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           ME+M+ SG  PD +S T+LVN LCK+GNVGYAMQLVEKME+YGYPTNTVTYNSLVRGLCM
Sbjct: 120 MELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCM 179

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            GNL+QSLQ LD+ ++KGLVPN FTYSFLLEAAYKERG   A++LLD+I+AKGGKPNLVS
Sbjct: 180 HGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVS 239

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YNVLLTGLCKEGRTEEA++FFRDLPSKGF PNVVSYNILLRSLC EGRWE+A ELLAEMD
Sbjct: 240 YNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMD 299

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           GG+RSP+IVT+NILIGSLA HG+TD AL+VLD+M + RF+ +AASYNPIIARLC EGKVD
Sbjct: 300 GGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVD 359

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           LVVKCLDQM +RRC PNEGTYN +A+LC  GKVQEAF+IIQSLGNKQNSS  +FYK VI+
Sbjct: 360 LVVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVIS 419

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           SLCRKG TY AFQLLYEMTKYGF PDSYTYSSLIRGLC EG+++EA+EIF +MEE   +P
Sbjct: 420 SLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRP 479

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           DVDNFNAL+LGLCK R+TDLSL VF+MM++KG MPNETTYTI+VEGIAHQ+E+EL+A VL
Sbjct: 480 DVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVL 539

Query: 541 KELQLRQVVSESAVERLVMQYDFEGIEV 568
           KEL LRQ V  S +ERLVMQYD EG+ +
Sbjct: 540 KELYLRQAVGRSTLERLVMQYDLEGLPI 567


>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 567

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/568 (75%), Positives = 493/568 (86%), Gaps = 1/568 (0%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYT 60
           MA+L+ SVS L NP  E  R A GF+S IPNLHSFSLNK F RVLASTQ+TISPKDSV T
Sbjct: 1   MASLVHSVSPLTNPFTEAARIACGFFSHIPNLHSFSLNKDFTRVLASTQITISPKDSVIT 60

Query: 61  KPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
            PN + G N D R+RD +++DAF  LE +V  GHKPDVVQAT LLYDLCK+NKMKKAI+V
Sbjct: 61  LPNWRSGKN-DQRNRDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRV 119

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           MEMM+S GIIPDA+SYT+LVN LCK+GNVGYAMQLVEKMED GYP NTVTYN+LV+GLCM
Sbjct: 120 MEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCM 179

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            GNLN+SLQFLDRL+QKGLVPNAFTYS LLEAAYKERGV+ AM+LLD+IIAKGG+PNLVS
Sbjct: 180 HGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVS 239

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YNVLLTGLCKEGR EEAIR F++LPSKGF PNVVSYNILLRSLC EGRWEEANELLAEM+
Sbjct: 240 YNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMN 299

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G +RSP+IVTYNILIGSLA+HGK + AL+V+DEM+ G F+P+A SYNPIIARLC EGKV+
Sbjct: 300 GRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVE 359

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            VV CLDQM   RC PNEGT+N +A+LC  GKVQEAF++IQSLGNKQNSS  ++YK V++
Sbjct: 360 AVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVS 419

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            LC+KG TY AF LLYEMTKYGFTPDSYTYSSLIRGLC+EG++ EA+EIF ++EE  Y+P
Sbjct: 420 CLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRP 479

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D+DNFNAL+LG CKS RTDLSLEVF+MMIEKG  P+ETTYTILVEGI H++E EL+AEVL
Sbjct: 480 DIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVL 539

Query: 541 KELQLRQVVSESAVERLVMQYDFEGIEV 568
           +EL LRQV+S+S VERL+MQYD EG  V
Sbjct: 540 RELHLRQVMSQSTVERLIMQYDLEGAPV 567


>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score =  882 bits (2278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/563 (74%), Positives = 488/563 (86%), Gaps = 2/563 (0%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYT 60
           MATLL++VS + N SPE  R+  GF+S IPNL   SLNKGF +VLASTQ+TISPKD+++T
Sbjct: 1   MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 61  KPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
            PN K G   + + ++ +L DAF  LE MV KG KPDV QAT LLYDLCKA KM+KAIKV
Sbjct: 61  LPNWKTGKV-EQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKV 119

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           MEMM+ SGIIPDASSYT+LV+ LC+KGNVGYAMQLV+KME+YGYPTNTVTYNSLVRGLCM
Sbjct: 120 MEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCM 179

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            GNL QSLQ LDRLIQKGLVPNA+TYSFLLEAAYKERG   A KLLD+IIAKGG+PNLVS
Sbjct: 180 HGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVS 239

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YNVLLTGLCKEGRTE+AIR FR+LPSKGF PNVVSYNILLRSLC EGRWEEAN LLAEM+
Sbjct: 240 YNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMN 299

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G +RSP+ VTYNILIGSLA HG+T+HAL+VL+EM++ RF+P+A+SYNPIIA LC +GK+D
Sbjct: 300 GDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLD 359

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           LVVKCLDQM +R C PNEGTYN +A LC  G VQEAF+IIQSLGNKQ+SS QEFYK VIT
Sbjct: 360 LVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVIT 419

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           SLCRKG TY AFQLLYEMTKYGFTPDS+TYSSLIRGLCMEG++ EA+EIF VMEE + KP
Sbjct: 420 SLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NNKP 478

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D +N+N+L+LG CKSRRTDL+L+VF++M+ KG +PNETTYTILVEGI H+ E++L+ +VL
Sbjct: 479 DTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVL 538

Query: 541 KELQLRQVVSESAVERLVMQYDF 563
           +ELQLR V+S+S +ERLVMQYD 
Sbjct: 539 RELQLRDVISQSTLERLVMQYDL 561


>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/563 (73%), Positives = 484/563 (85%), Gaps = 2/563 (0%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYT 60
           MATLL++VS + NPSPE  R+  GF+S IPN+   SLNKGF +VLASTQ+TISPKD+++T
Sbjct: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 61  KPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
            PN K G   D + ++ +LNDAF  LE MV KG KPDV QAT LLYDLCK  KM+KAIKV
Sbjct: 61  LPNWKIGKL-DQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKV 119

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           MEMM+ SGIIPDA+SYT+LV+ LC+KGNVGYAMQLV+KME+YGYPTNT TYNSLVRGLCM
Sbjct: 120 MEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCM 179

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            GNL QSLQ LDRLIQKGLVPNA+TYSFLLEAAYKERG   A KLLD+IIAKGGKPNLVS
Sbjct: 180 HGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVS 239

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YNVLLTGLCKEGRTE+A++ FR+LPSKGF PNVVSYNILLRSLC EGRWEEAN LLAEMD
Sbjct: 240 YNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMD 299

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G +RSP+ VTYNILIGSL  HG+T+HAL+VL+EM++ RF+P+A+SYNPIIARLC + KVD
Sbjct: 300 GDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVD 359

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           LVVKCLDQM +R C PNEGTYN +A LC  G VQEAF+IIQSLGNKQ+ S QEFYK VIT
Sbjct: 360 LVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVIT 419

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           SLCRKG TY AFQLLYEMTKYGFTPDS+TYSSLIRGLCMEG++ EA+EIF VMEE + K 
Sbjct: 420 SLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKL 478

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D +N+N+L+LG CKSRRTDL+L+VF++M+ KG + NETTYTILVEGI H+ E++L+ EVL
Sbjct: 479 DTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVL 538

Query: 541 KELQLRQVVSESAVERLVMQYDF 563
           +ELQLR V+++S VERLVMQYD 
Sbjct: 539 RELQLRDVINQSTVERLVMQYDL 561


>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/563 (73%), Positives = 484/563 (85%), Gaps = 2/563 (0%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYT 60
           MATLL++VS + NPSPE  R+  GF+S IPN+   SLNKGF +VLASTQ+TISPKD+++T
Sbjct: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 61  KPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
            PN K G   D + ++ +LNDAF  LE MV KG KPDV QAT LLYDLCK  KM+KAIKV
Sbjct: 61  LPNWKIGKL-DQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKV 119

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           MEMM+ SGIIPDA+SYT+LV+ LC+KGNVGYAMQLV+KME+YGYPTNT TYNSLVRGLCM
Sbjct: 120 MEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCM 179

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            GNL QSLQ LDRLIQKGLVPNA+TYSFLLEAAYKERG   A KLLD+IIAKGGKPNLVS
Sbjct: 180 HGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVS 239

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YNVLLTGLCKEGRTE+A++ FR+LPSKGF PNVVSYNILLRSLC EGRWEEAN LLAEMD
Sbjct: 240 YNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMD 299

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G +RSP+ VTYNILIGSL  HG+T+HAL+VL+EM++ RF+P+A+SYNPIIARLC + KVD
Sbjct: 300 GDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVD 359

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           LVVKCLDQM +R C PNEGTYN +A LC  G VQEAF+IIQSLGNKQ+ S QEFYK VIT
Sbjct: 360 LVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVIT 419

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           SLCRKG TY AFQLLYEMTKYGFTPDS+TYSSLIRGLCMEG++ EA+EIF VMEE + K 
Sbjct: 420 SLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKL 478

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D +N+N+L+LG CKSRRTDL+L+VF++M+ KG + NETTYTILVEGI H+ E++L+ EVL
Sbjct: 479 DTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVL 538

Query: 541 KELQLRQVVSESAVERLVMQYDF 563
           +ELQLR V+++S VERL+MQYD 
Sbjct: 539 RELQLRDVINQSTVERLIMQYDL 561


>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
 gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/568 (73%), Positives = 481/568 (84%), Gaps = 1/568 (0%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYT 60
           MATL++SVS L NPSPE  R A G +S +PN  SFS NKGF RVLAST +TISPKDSV+T
Sbjct: 1   MATLVNSVSPLTNPSPETLRTACGLFSNVPNFRSFSQNKGFTRVLASTHITISPKDSVWT 60

Query: 61  KPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
             N K G   DTR+RD +LNDAF  LE +V KGHKPDV QAT LLYDLCK+NKMKKA +V
Sbjct: 61  LSNWKVGRK-DTRNRDIRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRV 119

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           MEM + SGIIPDA+SYT+LVN LCK+GN+GYAMQLVEKME+ G PTNTVTYNSLVRGLC 
Sbjct: 120 MEMTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCK 179

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            GNLNQSLQ LD+L++KGLVPN FT+SFLLEAAYKERGV  AMKLLD IIAKGGKPNLVS
Sbjct: 180 HGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVS 239

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YNVLLTGLCKEGRTEEAI+FFRDLPSKGF PNVVS NI+LRSLC EGRWEEANEL+AEMD
Sbjct: 240 YNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMD 299

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
             +RSP++VTYNILIGSLA HG+  HA +VLDEM++  F+PSAA++NPII+ LC EGK D
Sbjct: 300 SEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKAD 359

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           LVVKCLDQM H  C PN+GT+N +A+LC  G+VQ AF+IIQSLGNKQNSS  +FY+ VI+
Sbjct: 360 LVVKCLDQMIHHCCNPNDGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVIS 419

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           SLCRKG TY AFQLLYEM + GF PD YTYSSLIRGLC+EG+++EALEIF ++EE DY+P
Sbjct: 420 SLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRP 479

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            + NFNAL+LG CKS RTDLSLE+F+MMI KG  PNETTYTILVEGIAH++E EL+AEVL
Sbjct: 480 ILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVL 539

Query: 541 KELQLRQVVSESAVERLVMQYDFEGIEV 568
           KEL +RQV+  + VERLVMQYD +G+ V
Sbjct: 540 KELYIRQVMRRNTVERLVMQYDLKGLPV 567


>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Glycine max]
          Length = 572

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/566 (69%), Positives = 478/566 (84%), Gaps = 3/566 (0%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYG--FYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSV 58
           MA+LL++VS  AN SP+  R   G   +SQ PNL +FSLNKGF RV ASTQ+ ISPKD++
Sbjct: 1   MASLLNTVSPAANLSPKTKRPTCGGFLHSQFPNLRTFSLNKGFSRVSASTQIAISPKDTI 60

Query: 59  YTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI 118
           +  PN + G N D + ++ ++ DAFL LE +V KG KP+V QAT LLYDLCK NK +KA+
Sbjct: 61  FNLPNWRVGRN-DQKGKELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAV 119

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           +VMEMMV SGIIPDA+SYT+LVN LCK+GNVGYA+QLVEKME +G+PTNTVTYN+LV+GL
Sbjct: 120 RVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGL 179

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           CM GNLNQSLQ LDRL +KGL+PNAFTYSFLLEAAYKERGV  AMKLLDDIIAKGG+PNL
Sbjct: 180 CMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNL 239

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           VSYNVLLTGLCKEGRTEEAI+ F++LP KGF P+VVS+NILLRSLC EGRWEEANELLAE
Sbjct: 240 VSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAE 299

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           MD  D+ P++VTYNILI SL+ +G+T+ A KVLDEM +  F+ SA SYNPIIARLC EGK
Sbjct: 300 MDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGK 359

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           VDLV+KCLDQM HRRC PNEGTY+ ++ML   GKVQEAF IIQSLG+KQN    +FYK +
Sbjct: 360 VDLVLKCLDQMIHRRCHPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNL 419

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I SLCRKG TY AFQ+LYEMTKYGFTPDSYTYSSLIRG+C EG+++EAL+IF ++EE D+
Sbjct: 420 IASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDH 479

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           +PD+DN+NAL+LG CK++RTDLS+E+F MM+ KG +PNE TYTILVEG+A ++E +++A+
Sbjct: 480 RPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAAD 539

Query: 539 VLKELQLRQVVSESAVERLVMQYDFE 564
           ++KEL L++V+S+S VERL MQYD +
Sbjct: 540 LMKELYLKKVLSQSTVERLCMQYDIK 565


>gi|30699392|ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g79080, chloroplastic; Flags: Precursor
 gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis thaliana]
 gi|332198080|gb|AEE36201.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 576

 Score =  813 bits (2100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/577 (67%), Positives = 482/577 (83%), Gaps = 14/577 (2%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPN--LHSFSLNKGFIRVLASTQVTISPKDSV 58
           M+TLL+SV ++A+P   P RKA GF S IP+  LH  S++KG  RVLASTQ+T+SPKDS 
Sbjct: 1   MSTLLNSVLSMASPESSP-RKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 59

Query: 59  YT------KPNRKPGN-NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA 111
           +T      KP+   G+ ++D R  +  L+D+F  LE +V+ GHKP+V  +T LLYDLCKA
Sbjct: 60  FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 119

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N++KKAI+V+E+MVSSGIIPDAS+YTYLVN LCK+GNVGYAMQLVEKMED+GYP+NTVTY
Sbjct: 120 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 179

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N+LVRGLCMLG+LNQSLQF++RL+QKGL PNAFTYSFLLEAAYKERG   A+KLLD+II 
Sbjct: 180 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 239

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KGG+PNLVSYNVLLTG CKEGRT++A+  FR+LP+KGF+ NVVSYNILLR LC +GRWEE
Sbjct: 240 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 299

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG--RFRPSAASYNPI 349
           AN LLAEMDGGDR+P++VTYNILI SLA+HG+T+ AL+VL EM KG  +FR +A SYNP+
Sbjct: 300 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 359

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQN 408
           IARLC EGKVDLVVKCLD+M +RRCKPNEGTYN +  LC    KVQEAF IIQSL NKQ 
Sbjct: 360 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 419

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
               +FYK VITSLCRKG T+ AFQLLYEMT+ GF PD++TYS+LIRGLC+EG+   A+E
Sbjct: 420 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 479

Query: 469 IFVVMEEYD-YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +  +MEE +  KP VDNFNA++LGLCK RRTDL++EVF+MM+EK +MPNETTY ILVEGI
Sbjct: 480 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           AH+DELEL+ EVL EL+LR+V+ ++AV+R+VMQ++ +
Sbjct: 540 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNLD 576


>gi|297842697|ref|XP_002889230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335071|gb|EFH65489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 580

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/580 (67%), Positives = 483/580 (83%), Gaps = 16/580 (2%)

Query: 1   MATLLSSV-STLANPSPEPF-RKAYGFYSQIPN--LHSFSLNKGFIRVLASTQVTISPKD 56
           M+TLL+SV S  ANPSPE   RK+ GF S IP   LH  S+NKG  RVLASTQ+T+SPKD
Sbjct: 1   MSTLLNSVLSMAANPSPESSPRKSLGFVSHIPTGFLHFSSVNKGVARVLASTQITLSPKD 60

Query: 57  SVYT------KPNRKPGN-NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLC 109
           S +T      KP+   G+ ++D R  +  L+D F  LE +V+ GHKP+V  +T LLYDLC
Sbjct: 61  SAFTITGSSWKPDLGSGSFSDDPRSDEPSLSDTFSHLECLVTDGHKPNVAHSTQLLYDLC 120

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           KAN++KKAI+V+E+MVSSGIIPDAS+YTYLVN LCK+GNVGYAMQLVEKMED+G+P+NTV
Sbjct: 121 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGFPSNTV 180

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TYN+LVRGLCMLG+LNQSLQF++RL+Q+GL PNAFTYSFLLEAAYKERG   A+KLLD+I
Sbjct: 181 TYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLEAAYKERGTDQAVKLLDEI 240

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           IAKGG+PNLVSYNVLLTG CKEGRT++A++ FR+LP KGF+ NVVSYNILLR LC +GRW
Sbjct: 241 IAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCDGRW 300

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG---RFRPSAASY 346
           +EAN LLAEMDGGDR+P++VTYNILI SLA+HG+T+ A++VL EM KG   +FR +A SY
Sbjct: 301 DEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMSKGHHHQFRVTATSY 360

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGN 405
           NP+IARLC EGKVDLVVKCLD+M +RRCKPNEGTY+ +  LC   GKVQEAF IIQSL N
Sbjct: 361 NPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSAIGALCEHNGKVQEAFYIIQSLSN 420

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           KQ     +FYK VITS+CRKG T+ AFQLLYEMT+ GF PD++TYS+LIRGLC+EG+   
Sbjct: 421 KQKCCTHDFYKSVITSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFIG 480

Query: 466 ALEIFVVMEEYDY-KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           A+E+  +MEE +Y KP VDNFNA++LGLCK RRTDL+LEVF+MM+ K +MPNETTY I+V
Sbjct: 481 AMEVLSIMEESEYHKPTVDNFNAMILGLCKIRRTDLALEVFEMMVGKKRMPNETTYAIIV 540

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           EGIAH+DELEL+ EVL+EL+ R+V+ ++AV+R+VMQ++ +
Sbjct: 541 EGIAHEDELELAKEVLEELRSRKVIGQNAVDRIVMQFNLD 580


>gi|3152594|gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
           Acinetobacter calcoaceticus [Arabidopsis thaliana]
          Length = 566

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/567 (68%), Positives = 473/567 (83%), Gaps = 14/567 (2%)

Query: 11  LANPSPEPFRKAYGFYSQIPN--LHSFSLNKGFIRVLASTQVTISPKDSVYT------KP 62
           +A+P   P RKA GF S IP+  LH  S++KG  RVLASTQ+T+SPKDS +T      KP
Sbjct: 1   MASPESSP-RKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSAFTITGSSWKP 59

Query: 63  NRKPGN-NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM 121
           +   G+ ++D R  +  L+D+F  LE +V+ GHKP+V  +T LLYDLCKAN++KKAI+V+
Sbjct: 60  DLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVI 119

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
           E+MVSSGIIPDAS+YTYLVN LCK+GNVGYAMQLVEKMED+GYP+NTVTYN+LVRGLCML
Sbjct: 120 ELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCML 179

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           G+LNQSLQF++RL+QKGL PNAFTYSFLLEAAYKERG   A+KLLD+II KGG+PNLVSY
Sbjct: 180 GSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSY 239

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           NVLLTG CKEGRT++A+  FR+LP+KGF+ NVVSYNILLR LC +GRWEEAN LLAEMDG
Sbjct: 240 NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 299

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG--RFRPSAASYNPIIARLCSEGKV 359
           GDR+P++VTYNILI SLA+HG+T+ AL+VL EM KG  +FR +A SYNP+IARLC EGKV
Sbjct: 300 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKV 359

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           DLVVKCLD+M +RRCKPNEGTYN +  LC    KVQEAF IIQSL NKQ     +FYK V
Sbjct: 360 DLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSV 419

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD- 477
           ITSLCRKG T+ AFQLLYEMT+ GF PD++TYS+LIRGLC+EG+   A+E+  +MEE + 
Sbjct: 420 ITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESEN 479

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            KP VDNFNA++LGLCK RRTDL++EVF+MM+EK +MPNETTY ILVEGIAH+DELEL+ 
Sbjct: 480 CKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAK 539

Query: 538 EVLKELQLRQVVSESAVERLVMQYDFE 564
           EVL EL+LR+V+ ++AV+R+VMQ++ +
Sbjct: 540 EVLDELRLRKVIGQNAVDRIVMQFNLD 566


>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
 gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/455 (75%), Positives = 402/455 (88%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           MKKA +VMEMM+ SGIIPDA+SYT+LVN LCK+GN+G+AMQLVEKME+ GYPTNTVTYNS
Sbjct: 1   MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNS 60

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           LVRGLCM GNLNQSLQ LD+L+ KGLVPN FTYSFLLEAAYKERGV+ AMKLLD+IIAKG
Sbjct: 61  LVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKG 120

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            +PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF PNVVSYNI+LRSLC EGRWEEAN
Sbjct: 121 WQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEAN 180

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +LLAEMD  +RSP++VTYNILIGSLA+HG+ +HA +VLDEMV+  F+PSA +YNPIIA L
Sbjct: 181 QLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHL 240

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
           C EGK+DLV+KCLDQM H RC PNEGT+N +A+LC  G+V EAF+IIQ+LGNKQ SS  +
Sbjct: 241 CKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHD 300

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
           FYK VITSLCRKG TY AFQLLYEMTK+GF PD YTYSSLIRGLC+EG+++EALEIF ++
Sbjct: 301 FYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLL 360

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           EE DY+P +DNFNAL+LG CKS RTDLSL++ +MM+EKG  PNETTYTI+VEGIAH++E 
Sbjct: 361 EENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEK 420

Query: 534 ELSAEVLKELQLRQVVSESAVERLVMQYDFEGIEV 568
           EL+AEVLKEL LRQV+  +  ERLV+QY+ E + V
Sbjct: 421 ELAAEVLKELLLRQVMRRNTAERLVLQYNLEALPV 455



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 156/311 (50%), Gaps = 1/311 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           +  +++  +N+A   L+ +++KG +P++V    LL  LCK  + ++AI+    + S G  
Sbjct: 98  EAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFN 157

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SY  ++  LC +G    A QL+ +M+      + VTYN L+  L   G +  + + 
Sbjct: 158 PNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEV 217

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD +++    P+A TY+ ++    KE  +   +K LD +I     PN  ++N +   LCK
Sbjct: 218 LDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAV-LCK 276

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +GR  EA    ++L +K        Y  ++ SLC +G    A +LL EM      P   T
Sbjct: 277 QGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYT 336

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI  L   G  D AL++   + +  +RP   ++N +I   C  G+ DL +  L+ M 
Sbjct: 337 YSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMV 396

Query: 371 HRRCKPNEGTY 381
            +   PNE TY
Sbjct: 397 EKGYTPNETTY 407


>gi|388490582|gb|AFK33357.1| unknown [Medicago truncatula]
          Length = 389

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 258/382 (67%), Positives = 313/382 (81%)

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
           M G LNQS+Q LDRLI+KGLVPN  TYS L+EAAYKERGV  AMKLLDDIIAKGGKPNLV
Sbjct: 1   MYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLV 60

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           SYNVLLTGLCKEGRTE+AI+ F++LP KGF+P VVS+NILLRSLC EGRW+EA EL+A M
Sbjct: 61  SYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGM 120

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           D   ++P++VTYN+LI SL+  G+ + A KVLDEM K  F+ SA SYNPIIARLC EG+V
Sbjct: 121 DRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRV 180

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
           DLVV+CLDQM +RR   N GTYN +A+LC  G V+EAF I++ LG KQN    +FYK VI
Sbjct: 181 DLVVQCLDQMINRRFHLNGGTYNAIALLCERGMVKEAFLILERLGKKQNYPISDFYKNVI 240

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
           T LCRKG TY AFQ+LYEMT +GFTPDSYTYSSLIRG+C EG+++EAL+IF ++EE+ Y 
Sbjct: 241 TLLCRKGSTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIFGILEEHGYV 300

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P VDN+NAL+LGLCKS+R D+S+E+FQMM+ KG MPNE TY I VE +A ++E+EL+A +
Sbjct: 301 PHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNIFVEALAFEEEMELAATL 360

Query: 540 LKELQLRQVVSESAVERLVMQY 561
           L EL L+ V+S+S VERL MQY
Sbjct: 361 LNELYLKGVLSQSTVERLFMQY 382



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 182/371 (49%), Gaps = 2/371 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KLN +   L+R++ KG  P+VV  + L+    K   + +A+K+++ +++ G  P+  SY 
Sbjct: 4   KLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYN 63

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LCK+G    A++L +++ + G+    V++N L+R LC  G  +++ + +  + + 
Sbjct: 64  VLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRD 123

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  TY+ L+ +   +  +  A K+LD++   G K +  SYN ++  LCKEGR +  
Sbjct: 124 GQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLV 183

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++    + ++ F  N  +YN  +  LC  G  +EA  +L  +      P    Y  +I  
Sbjct: 184 VQCLDQMINRRFHLNGGTYNA-IALLCERGMVKEAFLILERLGKKQNYPISDFYKNVITL 242

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G T  A ++L EM    F P + +Y+ +I  +C EG +D  ++    +      P+
Sbjct: 243 LCRKGSTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIFGILEEHGYVPH 302

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              YN L + LC   ++  +  I Q + NK     +  Y   + +L  + +   A  LL 
Sbjct: 303 VDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNIFVEALAFEEEMELAATLLN 362

Query: 437 EMTKYGFTPDS 447
           E+   G    S
Sbjct: 363 ELYLKGVLSQS 373



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 155/312 (49%), Gaps = 1/312 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           +  +++  +++A   L+ +++KG KP++V    LL  LCK  + + AIK+ + +   G  
Sbjct: 32  EAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFK 91

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   S+  L+  LC +G    A +L+  M+  G   + VTYN L+  L + G + Q+ + 
Sbjct: 92  PCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKV 151

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD + + G   +A +Y+ ++    KE  V   ++ LD +I +    N  +YN +   LC+
Sbjct: 152 LDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAIAL-LCE 210

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +EA      L  K   P    Y  ++  LC +G    A ++L EM     +P   T
Sbjct: 211 RGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGSTYPAFQILYEMTVHGFTPDSYT 270

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI  +   G  D AL++   + +  + P   +YN +I  LC   ++D+ ++    M 
Sbjct: 271 YSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMV 330

Query: 371 HRRCKPNEGTYN 382
           ++ C PNE TYN
Sbjct: 331 NKGCMPNEMTYN 342



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 63/135 (46%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L  M   G  PD    ++L+  +C+   + +A+++  ++   G +P   +Y  L+ 
Sbjct: 252 AFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALIL 311

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK   +  ++++ + M + G   N +TYN  V  L     +  +   L+ L  KG++ 
Sbjct: 312 GLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNIFVEALAFEEEMELAATLLNELYLKGVLS 371

Query: 202 NAFTYSFLLEAAYKE 216
            +      ++ A K+
Sbjct: 372 QSTVERLFMQYALKQ 386



 Score = 39.7 bits (91), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 36/69 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  L++A      +   G+ P V     L+  LCK+ ++  +I++ +MMV+ G +P+  
Sbjct: 280 REGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEM 339

Query: 135 SYTYLVNCL 143
           +Y   V  L
Sbjct: 340 TYNIFVEAL 348


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/499 (42%), Positives = 314/499 (62%), Gaps = 6/499 (1%)

Query: 68  NNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
           NNN  R   R+ +L + F  LE MV +G  PD++  T+L+  LCK  K  KA +VME++ 
Sbjct: 113 NNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILE 172

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
            SG +PD  +Y  L++  CK G +G A+QL+++M       + VTYN+++R LC  G L 
Sbjct: 173 DSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLK 229

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           ++++ LDR +Q+   P+  TY+ L+EA  KE GV  AMKLLD++  KG KP++V+YNVL+
Sbjct: 230 EAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 289

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G+CKEGR +EAIRF   +PS G +PNV+++NI+LRS+C  GRW +A + LAEM     S
Sbjct: 290 NGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 349

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P++VT+NILI  L   G    A+ VL++M +    P++ SYNP++  LC + K++  ++ 
Sbjct: 350 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEY 409

Query: 366 LDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           LD M  R C P+  TYN  L  LC  GKV  A  I+  LG+K  S     Y  VI  L +
Sbjct: 410 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 469

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            GKT  A +LL EM   G  PD  TYS+L+ GL  EG ++EA+  F  +EE   KP+   
Sbjct: 470 VGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAIT 529

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N+++LGLCK+R+T  +++    M+ +G  P ET+Y IL+EG+A++   + + E+L EL 
Sbjct: 530 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELC 589

Query: 545 LRQVVSESAVERLVMQYDF 563
            R VV +S+ E++V++  F
Sbjct: 590 SRGVVKKSSAEQVVVKIPF 608


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/487 (41%), Positives = 307/487 (63%), Gaps = 4/487 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L D F  LE MV +G  PD++  T+L+   C+  K KKA  VME++  SG +PD  
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK G +  A+Q++++M       + VTYN+++R LC  G L Q+++ LDR 
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +QK   P+  TY+ L+EA  KE GV  AMKLLD++  KG KP++V+YNVL+ G+CKEGR 
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI+F  ++PS G +PNV+++NI+LRS+C  GRW +A +LL++M     SP++VT+NIL
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G    A+ +L++M      P++ SYNP++   C E K+D  ++ LD M  R C
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN  L  LC  GKV  A  I+  L +K  S     Y  VI  L + GKT +A +
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM + G  PD  TYSSL+ GL  EG ++EA++ F  +E    +P+   +N+++LGLC
Sbjct: 483 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 542

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           KSR+TD +++    MI K   P E TYTIL+EGIA++   + + ++L EL  R +V +S+
Sbjct: 543 KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSS 602

Query: 554 VERLVMQ 560
            E++ ++
Sbjct: 603 AEQVAVK 609


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/487 (41%), Positives = 307/487 (63%), Gaps = 4/487 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L D F  LE MV +G  PD++  T+L+   C+  K KKA  VME++  SG +PD  
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK G +  A+Q++++M       + VTYN+++R LC  G L Q+++ LDR 
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +QK   P+  TY+ L+EA  KE GV  AMKLLD++  KG KP++V+YNVL+ G+CKEGR 
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI+F  ++PS G +PNV+++NI+LRS+C  GRW +A +LL++M     SP++VT+NIL
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G    A+ +L++M      P++ SYNP++   C E K+D  ++ LD M  R C
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN  L  LC  GKV  A  I+  L +K  S     Y  VI  L + GKT +A +
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM + G  PD  TYSSL+ GL  EG ++EA++ F  +E    +P+   +N+++LGLC
Sbjct: 426 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 485

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           KSR+TD +++    MI K   P E TYTIL+EGIA++   + + ++L EL  R +V +S+
Sbjct: 486 KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSS 545

Query: 554 VERLVMQ 560
            E++ ++
Sbjct: 546 AEQVAVK 552


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/494 (39%), Positives = 313/494 (63%), Gaps = 6/494 (1%)

Query: 68  NNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
           +NN  R   R  +L + F  LE MV  G+ PD++  T L+   C+  K +KA K++E++ 
Sbjct: 105 SNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
            SG +PD  +Y  +++  CK G +  A+ ++++M       + VTYN+++R LC  G L 
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           Q+++ LDR++Q+   P+  TY+ L+EA  ++ GV  AMKLLD++  +G  P++V+YNVL+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G+CKEGR +EAI+F  D+PS G +PNV+++NI+LRS+C  GRW +A +LLA+M     S
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P++VT+NILI  L   G    A+ +L++M +   +P++ SYNP++   C E K+D  ++ 
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401

Query: 366 LDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L++M  R C P+  TYN  L  LC  GKV++A  I+  L +K  S     Y  VI  L +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            GKT +A +LL EM      PD+ TYSSL+ GL  EG ++EA++ F   E    +P+   
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           FN+++LGLCKSR+TD +++    MI +G  PNET+YTIL+EG+A++   + + E+L EL 
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELC 581

Query: 545 LRQVVSESAVERLV 558
            + ++ +S+ E++ 
Sbjct: 582 NKGLMKKSSAEQVA 595



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/110 (19%), Positives = 48/110 (43%)

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           Y      F  +    ++ +R +   G +EE  +    M  +   PD+     L+ G C+ 
Sbjct: 91  YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            +T  + ++ +++   G +P+  TY +++ G     E+  +  VL  + +
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/493 (39%), Positives = 311/493 (63%), Gaps = 6/493 (1%)

Query: 68  NNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
           +NN  R   R  +L + F  LE MV  G+ PD++  T L+   C+  K +KA K++E++ 
Sbjct: 105 SNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLE 164

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
            SG +PD  +Y  +++  CK G +  A+ ++++M       + VTYN+++R LC  G L 
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           Q+++ LDR++Q+   P+  TY+ L+EA  ++ GV  AMKLLD++  +G  P++V+YNVL+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLV 281

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G+CKEGR +EAI+F  D+PS G +PNV+++NI+LRS+C  GRW +A +LLA+M     S
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P++VT+NILI  L   G    A+ +L++M K   +P++ SYNP++   C E K+D  ++ 
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401

Query: 366 LDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L++M  R C P+  TYN  L  LC  GKV++A  I+  L +K  S     Y  VI  L +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            GKT +A +LL EM      PD+ TYSSL+ GL  EG ++EA++ F   E    +P+   
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVT 521

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           FN+++LGLCK+R+TD +++    MI +G  P ET+YTIL+EG+A++   + + E+L EL 
Sbjct: 522 FNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELC 581

Query: 545 LRQVVSESAVERL 557
            + ++  S+ E++
Sbjct: 582 NKGLMKRSSAEQV 594


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/487 (41%), Positives = 307/487 (63%), Gaps = 4/487 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L +    LERM+ +G  PDV+  T+L+   C++ K KKA ++ME++ +SG +PD  
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   CK G +  A++++E+M       + VTYN+++R LC  G L ++++ LDR 
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+   P+  TY+ L+EA   + GV  AMKLLD++  KG KP++V+YNVL+ G+CKEGR 
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI+F  ++PS G +PNV+++NI+LRS+C  GRW +A  LL++M     SP++VT+NIL
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNIL 354

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L        A+ VL++M K    P++ SYNP++   C E K+D  ++ L+ M  R C
Sbjct: 355 INFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 414

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN  L  LC  GKV  A  I+  L +K  S     Y  VI  L + GKT  A +
Sbjct: 415 YPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM + G  PD  TYS+L+RGL  EG ++EA++IF  ME    KP    +NA++LGLC
Sbjct: 475 LLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 534

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K+++T  +++    M+EKG  P E TYTIL+EGIA +   E + E+L EL  R  V +S+
Sbjct: 535 KAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRGFVKKSS 594

Query: 554 VERLVMQ 560
            E++V++
Sbjct: 595 AEQVVVK 601



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 197/413 (47%), Gaps = 48/413 (11%)

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           F  +  L    +   +   +K L+ +I +G  P++++   L+ G C+ G+T++A R    
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 264 LPSKGFEPNVVSYNIL--------------------------------LRSLCMEGRWEE 291
           L + G  P+V++YN+L                                LRSLC  G+ +E
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKE 226

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A E+L      +  P ++TY ILI +         A+K+LDEM K   +P   +YN +I 
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSS 410
            +C EG++D  +K L+ M    CKPN  T+N  L  +C  G+  +A  ++  +  K  S 
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               +  +I  LCRK    +A  +L +M K+G  P+S +Y+ L+ G C E  ++ A+E  
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            +M      PD+  +N LL  LCK  + D ++E+   +  KG  P   TY  +++G+   
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466

Query: 531 DELELSAEVLKELQ--------------LRQVVSESAV-ERLVMQYDFEGIEV 568
            + E + E+L+E++              LR +  E  V E + + +D EG+ +
Sbjct: 467 GKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSI 519



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 39/287 (13%)

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM---------------VKGRFR------ 340
           G RS      NI +  L  +G+ +  LK L+ M               ++G  R      
Sbjct: 100 GSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKK 159

Query: 341 --------------PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LA 385
                         P   +YN +I   C  G++D  ++ L++M      P+  TYN  L 
Sbjct: 160 ATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILR 216

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  GK++EA  ++     ++       Y  +I + C      QA +LL EM K G  P
Sbjct: 217 SLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKP 276

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  TY+ LI G+C EG ++EA++    M  Y  KP+V   N +L  +C + R   +  + 
Sbjct: 277 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLL 336

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             M+ KG  P+  T+ IL+  +  +  L  + +VL+++     V  S
Sbjct: 337 SDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/487 (41%), Positives = 304/487 (62%), Gaps = 4/487 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L +    LERM+ +G  PDV+  T+L+   C++ K +KA ++ME++ +SG +PD  
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   CK G +  A+Q++E+M       + VTYN+++R LC  G L ++++ LDR 
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+   P+  TY+ L+EA   + GV  AMKLLD++  KG KP++V+YNVL+ G+CKEGR 
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI+F  ++P  G +PNV+++NI+LRS+C  GRW +A  LLA+M     SP++VT+NIL
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L        A+ VL++M K    P++ SYNP++   C E K+D  ++ L+ M  R C
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN  L  LC  GK   A  I+  L +K  S     Y  VI  L + GKT  A +
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM + G  PD  TYS+L+RGL  EG ++EA++IF  ME    KP    +NA++LGLC
Sbjct: 476 LLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 535

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K+++T  +++    M+EKG  P + TYTIL+EGIA +   E + E+L EL  R  V +S+
Sbjct: 536 KAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRGFVKKSS 595

Query: 554 VERLVMQ 560
            E++ ++
Sbjct: 596 AEQVAVK 602



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 197/413 (47%), Gaps = 48/413 (11%)

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           F  +  L    +   +   +K L+ +I +G  P++++   L+ G C+ G+T +A R    
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 264 LPSKGFEPNVVSYNIL--------------------------------LRSLCMEGRWEE 291
           L + G  P+V++YN+L                                LRSLC  G+ +E
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKE 227

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A E+L      +  P ++TY ILI +         A+K+LDEM K   +P   +YN +I 
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSS 410
            +C EG++D  +K L+ M    C+PN  T+N  L  +C  G+  +A  ++  +  K  S 
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               +  +I  LCRK    +A  +L +M K+G  P+S +Y+ L+ G C E  ++ A+E  
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            +M      PD+  +N LL  LCK  + D ++E+   +  KG  P   TY  +++G+   
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467

Query: 531 DELELSAEVLKELQ--------------LRQVVSESAV-ERLVMQYDFEGIEV 568
            + E +AE+L+E++              LR +  E  V E + + +D EG+ +
Sbjct: 468 GKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSI 520



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 39/278 (14%)

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV--------------------KGRFR- 340
           G RS      NI +  L  +G+ +  LK L+ M+                     G+ R 
Sbjct: 101 GSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRK 160

Query: 341 --------------PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LA 385
                         P   +YN +I   C  G++D  ++ L++M      P+  TYN  L 
Sbjct: 161 ATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILR 217

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  GK++EA  ++     ++       Y  +I + C      QA +LL EM K G  P
Sbjct: 218 SLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKP 277

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  TY+ LI G+C EG ++EA++    M  Y  +P+V   N +L  +C + R   +  + 
Sbjct: 278 DVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLL 337

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             M+ KG  P+  T+ IL+  +  +  L  + +VL+++
Sbjct: 338 ADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 375


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  344 bits (882), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 190/499 (38%), Positives = 292/499 (58%), Gaps = 14/499 (2%)

Query: 62  PNRKPGNNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVV-QATNLLYDLCKANKMKKAI 118
           P+R   +N+  R   R   L +A   +E M   G +P        L+  LC + +  +A 
Sbjct: 53  PHRSAASNDRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEAR 110

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           +V+     +   PD  SY  +V   C  G +  A +LV  M       +T TYN+L+RGL
Sbjct: 111 RVL-----ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGL 162

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C  G  + +L  LD ++++G VP+  TY+ LLEA  K  G   A+KLLD++  KG  P++
Sbjct: 163 CGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDI 222

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+YNV++ G+C+EGR ++A+ F + LPS G EPN VSYNI+L+ LC   RWE+A +L+AE
Sbjct: 223 VTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 282

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M    R P +VT+N+LI  L   G  + A+++LD++ K    P++ SYNPI+   C + K
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +D  +  ++ M    C P+  +YN  L  LC  G+V  A  ++  L +K  +     Y  
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           VI  L + GKT +A +LL EM   G  PD  TYS++  GLC EG IEEA++ F  +++  
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            +P+   +NA+LLGLCK R T  ++++F  M+  G MPNE+TYTIL+EG+A++  ++ + 
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522

Query: 538 EVLKELQLRQVVSESAVER 556
           E++ EL  R VVS++ V +
Sbjct: 523 EMMAELCSRGVVSKTLVNK 541



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 51/102 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ +A     ++   G +P+ V    +L  LCK      AI +   MVS+G +P+ S
Sbjct: 444 REGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNES 503

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           +YT L+  L  +G V  A +++ ++   G  + T+     +R
Sbjct: 504 TYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIR 545


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 176/473 (37%), Positives = 273/473 (57%), Gaps = 2/473 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE MV KG+ PDV+  T L+        + KA++VME++   G  PD  +Y  L+N  CK
Sbjct: 108 LETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 166

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A +++++M    +  +TVTYN ++  LC  G L+ +L+ LD+L+     P   T
Sbjct: 167 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVIT 226

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+EA   E GV  A+KLLD+++++G KP++ +YN ++ G+CKEG  + A    R+L 
Sbjct: 227 YTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLE 286

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG EP+V+SYNILLR+L  +G+WEE  +L+ +M      P +VTY+ILI +L   GK +
Sbjct: 287 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 346

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A+ +L  M +    P A SY+P+IA  C EG++D+ ++ L+ M    C P+   YN  L
Sbjct: 347 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 406

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
           A LC  GK  +A  I   LG    S     Y  + ++L   G   +A  ++ EM   G  
Sbjct: 407 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGID 466

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY+S+I  LC EG++++A E+ V M   ++ P V  +N +LLG CK+ R + +++V
Sbjct: 467 PDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDV 526

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              M+  G  PNETTYT+L+EGI        + E+  +L     +SE + +RL
Sbjct: 527 LDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSFKRL 579



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 213/410 (51%), Gaps = 7/410 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++DA   L+RM SK   PD V    ++  LC   K+  A+KV++ ++S    P   +Y
Sbjct: 168 NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITY 227

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+     +G V  A++L+++M   G   +  TYN+++RG+C  G ++++ + +  L  
Sbjct: 228 TILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLEL 287

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG  P+  +Y+ LL A   +       KL+  + ++   PN+V+Y++L+T LC++G+ EE
Sbjct: 288 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 347

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+   + +  KG  P+  SY+ L+ + C EGR + A E L  M      P IV YN ++ 
Sbjct: 348 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 407

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +L  +GK D AL++  ++ +    P+++SYN + + L S G     +  + +M      P
Sbjct: 408 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDP 467

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +E TYN + + LC  G V +AF ++  + + +       Y  V+   C+  +   A  +L
Sbjct: 468 DEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVL 527

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI------FVVMEEYDYK 479
             M   G  P+  TY+ LI G+   G   EA+E+         + EY +K
Sbjct: 528 DSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSFK 577



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 117/225 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD K+ +A   L+ M  KG  PD      L+   C+  ++  AI+ +E M+S G +PD  
Sbjct: 341 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 400

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  LCK G    A+++  K+ + G   N+ +YN++   L   G+  ++L  +  +
Sbjct: 401 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 460

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ P+  TY+ ++    +E  V  A +LL D+ +    P++V+YN++L G CK  R 
Sbjct: 461 VSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 520

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           E+AI     +   G  PN  +Y +L+  +   G   EA EL  ++
Sbjct: 521 EDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  341 bits (874), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 199/536 (37%), Positives = 308/536 (57%), Gaps = 18/536 (3%)

Query: 33  HSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRH-----RDHKLNDAFLQLE 87
           HS   +KG     A   V  SP D V T  N +    ++ RH     R+ +L +    LE
Sbjct: 53  HSERFSKG-----ALNGVESSP-DRVNTSLNFE---ESEIRHLRRLIRNGELEEGSRFLE 103

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
            M +KG  PDV+  T L+ + CK  + K A ++M ++  SG + D +SY  L++  CK G
Sbjct: 104 YMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSG 163

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A++++++M   G   N  TY++++  LC  G L Q++Q L R +Q    P+  T +
Sbjct: 164 EIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCT 220

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++A  KE GV  AMKL +++  KG KP++V+YNVL+ G CK GR +EAIRF + LPS 
Sbjct: 221 VLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSY 280

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G +P+V+S+N++LRSLC  GRW +A +LLA M      P++VT+NILI  L   G    A
Sbjct: 281 GCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKA 340

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
           L VL+ M K    P++ S+NP+I   C+   +D  ++ L+ M  R C P+  TYN  L  
Sbjct: 341 LNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTA 400

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  GKV +A  I+  L +K  S     Y  VI  L + GK   A +LL EM   G  PD
Sbjct: 401 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 460

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             T +S++ GL  EG + EA++ F  ++ +  +P+   +N+++ GLCKS++T L+++   
Sbjct: 461 LITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLA 520

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
            M+ KG  P E TYT L++GI ++   E ++++  EL  R +V  S VE++ ++ +
Sbjct: 521 DMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKVSLEVE 576


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 273/473 (57%), Gaps = 2/473 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE MV KG+ PDV+  T L+        + KA++VME++   G  PD  +Y  L+N  CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 170

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A +++++M    +  +TVTYN ++  LC  G L+ +L+ L++L+     P   T
Sbjct: 171 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+EA   E GV  A+KL+D+++++G KP++ +YN ++ G+CKEG  + A    R+L 
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG EP+V+SYNILLR+L  +G+WEE  +L+ +M      P +VTY+ILI +L   GK +
Sbjct: 291 LKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A+ +L  M +    P A SY+P+IA  C EG++D+ ++ L+ M    C P+   YN  L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
           A LC  GK  +A  I   LG    S     Y  + ++L   G   +A  ++ EM   G  
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY+S+I  LC EG+++EA E+ V M   ++ P V  +N +LLG CK+ R + ++ V
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
            + M+  G  PNETTYT+L+EGI        + E+  +L     +SE + +RL
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 212/410 (51%), Gaps = 7/410 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++DA   L+RM SK   PD V    ++  LC   K+  A+KV+  ++S    P   +Y
Sbjct: 172 NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITY 231

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+     +G V  A++L+++M   G   +  TYN+++RG+C  G ++++ + +  L  
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG  P+  +Y+ LL A   +       KL+  + ++   PN+V+Y++L+T LC++G+ EE
Sbjct: 292 KGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+   + +  KG  P+  SY+ L+ + C EGR + A E L  M      P IV YN ++ 
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +L  +GK D AL++  ++ +    P+++SYN + + L S G     +  + +M      P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +E TYN + + LC  G V EAF ++  + + +       Y  V+   C+  +   A  +L
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI------FVVMEEYDYK 479
             M   G  P+  TY+ LI G+   G   EA+E+         + EY +K
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFK 581



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 143/276 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  ++ AF  +  +  KG +PDV+    LL  L    K ++  K+M  M S    P+  
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+  LC+ G +  AM L++ M++ G   +  +Y+ L+   C  G L+ +++FL+ +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I  G +P+   Y+ +L    K      A+++   +   G  PN  SYN + + L   G  
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+    ++ S G +P+ ++YN ++  LC EG  +EA ELL +M   +  P++VTYNI+
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +       + + A+ VL+ MV    RP+  +Y  +I
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 117/225 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD K+ +A   L+ M  KG  PD      L+   C+  ++  AI+ +E M+S G +PD  
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  LCK G    A+++  K+ + G   N+ +YN++   L   G+  ++L  +  +
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ P+  TY+ ++    +E  V  A +LL D+ +    P++V+YN++L G CK  R 
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           E+AI     +   G  PN  +Y +L+  +   G   EA EL  ++
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 6/143 (4%)

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           QSLG +     + F++      CR G   ++  LL  M + G+ PD    + LI+G    
Sbjct: 83  QSLGFRDTQMLKIFHRS-----CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
             I +A+ +  ++E++  +PDV  +NAL+ G CK  R D +  V   M  K   P+  TY
Sbjct: 138 RNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
            I++  +  + +L+L+ +VL +L
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQL 219


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 176/482 (36%), Positives = 282/482 (58%), Gaps = 4/482 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            N++   L  +V+KGHKPDVV  T L++ L  +  + KAI+VM ++ + G  PD  +Y  
Sbjct: 73  FNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNA 131

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++   C+   +  A Q++++M++ G+  + VTYN L+  LC  G L+ +L+F ++L+++ 
Sbjct: 132 IITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKEN 191

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P   TY+ L+EA   + G+  AMKLLD+++    +P++ +YN ++ G+C+EG  + A 
Sbjct: 192 CKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAF 251

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +    + SKG+ P+V++YNILLR L  +G+WE   EL+++M        +VTY++LI S+
Sbjct: 252 QIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSV 311

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK +  + +L +M K   +P    Y+P+IA LC EG+VDL ++ LD M    C P+ 
Sbjct: 312 CRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDI 371

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             YN  LA LC   +  EA +I + LG    S     Y  + ++L   G   +A  ++ E
Sbjct: 372 VNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILE 431

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV--VMEEYDYKPDVDNFNALLLGLCKS 495
           M   G  PD  TY+SLI  LC +G+++EA+E+ V   ME  + KP V ++N +LLGLCK 
Sbjct: 432 MLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKV 491

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            R   ++EV   M++KG  PNETTYT L+EGI     L  + ++   L     +SE + E
Sbjct: 492 SRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHSFE 551

Query: 556 RL 557
           RL
Sbjct: 552 RL 553



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 211/406 (51%), Gaps = 3/406 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R ++++ A+  L+RM +KG  PD+V    L+  LC    +  A++    ++     P   
Sbjct: 138 RANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVV 197

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+     +G +  AM+L+++M +     +  TYNS++RG+C  G ++++ Q +  +
Sbjct: 198 TYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSI 257

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG  P+  TY+ LL     +    A  +L+ D++A+G + N+V+Y+VL++ +C++G+ 
Sbjct: 258 SSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKV 317

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EE +   +D+  KG +P+   Y+ L+ +LC EGR + A E+L  M      P IV YN +
Sbjct: 318 EEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTI 377

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L    + D AL + +++ +    P+A+SYN + + L S G     +  + +M  +  
Sbjct: 378 LACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGV 437

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQA 431
            P+  TYN L + LC  G V EA  ++  +  + +        Y  V+  LC+  +   A
Sbjct: 438 DPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDA 497

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            ++L  M   G  P+  TY+ LI G+   G + +A ++   +   D
Sbjct: 498 IEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMD 543


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 273/473 (57%), Gaps = 2/473 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE MV KG+ PDV+  T L+        + KA++VME++   G  PD  +Y  L+N  CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 170

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A +++++M    +  +TVTYN ++  LC  G L+ +L+ L++L+     P   T
Sbjct: 171 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+EA   E GV  A+KL+D+++++G KP++ +YN ++ G+CKEG  + A    R+L 
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG EP+V+SYNILLR+L  +G+WEE  +L+ +M      P +VTY+ILI +L   GK +
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A+ +L  M +    P A SY+P+IA  C EG++D+ ++ L+ M    C P+   YN  L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
           A LC  GK  +A  I   LG    S     Y  + ++L   G   +A  ++ EM   G  
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY+S+I  LC EG+++EA E+ V M   ++ P V  +N +LLG CK+ R + ++ V
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
            + M+  G  PNETTYT+L+EGI        + E+  +L     +SE + +RL
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 212/410 (51%), Gaps = 7/410 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++DA   L+RM SK   PD V    ++  LC   K+  A+KV+  ++S    P   +Y
Sbjct: 172 NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITY 231

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+     +G V  A++L+++M   G   +  TYN+++RG+C  G ++++ + +  L  
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG  P+  +Y+ LL A   +       KL+  + ++   PN+V+Y++L+T LC++G+ EE
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+   + +  KG  P+  SY+ L+ + C EGR + A E L  M      P IV YN ++ 
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +L  +GK D AL++  ++ +    P+++SYN + + L S G     +  + +M      P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +E TYN + + LC  G V EAF ++  + + +       Y  V+   C+  +   A  +L
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI------FVVMEEYDYK 479
             M   G  P+  TY+ LI G+   G   EA+E+         + EY +K
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFK 581



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 143/276 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  ++ AF  +  +  KG +PDV+    LL  L    K ++  K+M  M S    P+  
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+  LC+ G +  AM L++ M++ G   +  +Y+ L+   C  G L+ +++FL+ +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I  G +P+   Y+ +L    K      A+++   +   G  PN  SYN + + L   G  
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+    ++ S G +P+ ++YN ++  LC EG  +EA ELL +M   +  P++VTYNI+
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +       + + A+ VL+ MV    RP+  +Y  +I
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 117/225 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD K+ +A   L+ M  KG  PD      L+   C+  ++  AI+ +E M+S G +PD  
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  LCK G    A+++  K+ + G   N+ +YN++   L   G+  ++L  +  +
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ P+  TY+ ++    +E  V  A +LL D+ +    P++V+YN++L G CK  R 
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           E+AI     +   G  PN  +Y +L+  +   G   EA EL  ++
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 6/143 (4%)

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           QSLG +     + F++      CR G   ++  LL  M + G+ PD    + LI+G    
Sbjct: 83  QSLGFRDTQMLKIFHRS-----CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
             I +A+ +  ++E++  +PDV  +NAL+ G CK  R D +  V   M  K   P+  TY
Sbjct: 138 RNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
            I++  +  + +L+L+ +VL +L
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQL 219


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  338 bits (867), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 182/481 (37%), Positives = 276/481 (57%), Gaps = 2/481 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K N++   LE +V+KG+ PDV+  T L+        ++KA +VME++  S   PD  +Y 
Sbjct: 93  KFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVFAYN 151

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK   +  A Q++ +M+  G+  + VTYN ++  LC    L  +L  LD+L+  
Sbjct: 152 AVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLD 211

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +P   TY+ L+EA   E G++ AMKLL++++A+G  P++ +YN ++ G+CKEG  E A
Sbjct: 212 NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERA 271

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 L SKG EP+V+SYNILLR+   +G+W+E  +L+AEM      P  VTY+ILI S
Sbjct: 272 AELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS 331

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D A+ VL  M++    P   SY+P+I+ LC EG++DL +  +D M    C P+
Sbjct: 332 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 391

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              YN  LA LC  G   +A  I   L           Y  +I++L   G   +A  ++ 
Sbjct: 392 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 451

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  PD  TY+SLI  LC +GL+EEA+ +   ME+  ++P V ++N +LLGLCK R
Sbjct: 452 AMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 511

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           R D ++ +F  MIEKG  PNETTY +L+EGI        + E+   L  R V+S+ + +R
Sbjct: 512 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKR 571

Query: 557 L 557
           L
Sbjct: 572 L 572



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 207/404 (51%), Gaps = 11/404 (2%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYN-------SLVRGLCMLGNL 184
           S +T +V C     N GY  +   K+       P +  +Y+        L+   C  G  
Sbjct: 35  SHHTSIVTCRNPNPNDGYNSRNSPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKF 94

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           N+SL FL+ L+ KG  P+    + L++  +  + +  A +++ +I+    +P++ +YN +
Sbjct: 95  NESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAV 153

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           ++G CK  + E A +    + ++GF P++V+YNI++ SLC   +   A  +L ++   + 
Sbjct: 154 ISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNC 213

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            PT++TY ILI +    G  + A+K+L+EM+     P   +YN II  +C EG V+   +
Sbjct: 214 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 273

Query: 365 CLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            +  +  + C+P+  +YN  L      GK  E   ++  + ++     +  Y  +I+SLC
Sbjct: 274 LITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLC 333

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R G+  +A  +L  M +   TPD+Y+Y  LI  LC EG ++ A+ I   M      PD+ 
Sbjct: 334 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIV 393

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           N+N +L  LCK+   + +LE+F  +   G  PN ++Y  ++  +
Sbjct: 394 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 35/228 (15%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++++A   L+ M+ K   PD      L+  LCK  ++  AI +M+ M+S+G +PD  
Sbjct: 334 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIV 393

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT-------------------------- 168
           +Y  ++  LCK GN   A+++  K+   G P N                           
Sbjct: 394 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAM 453

Query: 169 ---------VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
                    +TYNSL+  LC  G + +++  LD + Q G  P   +Y+ +L    K R +
Sbjct: 454 ISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRI 513

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             A+ +  ++I KG +PN  +Y +L+ G+   G   EA+     L S+
Sbjct: 514 DDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  337 bits (864), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 192/511 (37%), Positives = 291/511 (56%), Gaps = 18/511 (3%)

Query: 58  VYTKPNRKPG---NNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQA--TNLLYDLCK 110
           V   PN  P    +N+  R   R   L +A   +E M   G +P         L+  LC 
Sbjct: 49  VAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCA 106

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
           + +  +A +V+     +   PD  +Y  +V   C  G +  A +LV  M       ++ T
Sbjct: 107 SGRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYT 158

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN+L+RGLC  G    +L  LD ++++G VP+  TY+ LLEA  K  G   AMKLLD++ 
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           AKG  P++++YNV++ G+C+EGR ++AI F + LPS G EPN VSYNI+L+ LC   RWE
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +A +L+AEM      P +VT+N+LI  L   G  + A++VLD++ K    P++ SYNPI+
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNS 409
              C + K+D  +  ++ M  R C P+  +YN  L  LC  G+V  A  ++  L +K  +
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  VI  L + GKT +A +LL EM   G  PD  TYS++  GLC E  IEEA+  
Sbjct: 399 PVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRA 458

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  +++   +P+   +NA+LLGLCK R T  ++++F  MI  G MPNE+TYTIL+EG+ +
Sbjct: 459 FCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTY 518

Query: 530 QDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +  ++ + E+L EL  R VVS+  + +  ++
Sbjct: 519 EGLVKEARELLGELCSRGVVSKGLINKAAIR 549


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 181/481 (37%), Positives = 277/481 (57%), Gaps = 2/481 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K N++   LE +V+KG+ PDV+  T L+        ++KA +VME++  S   PD  +Y 
Sbjct: 83  KFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVFAYN 141

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK   +  A Q++ +M+  G+  + VTYN ++  LC    L  +L+ LD+L+  
Sbjct: 142 AVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLD 201

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +P   TY+ L+EA   E G++ AMKLL++++A+G  P++ +YN ++ G+CKEG  E A
Sbjct: 202 NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERA 261

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 L SKG +P+V+SYNILLR+   +G+W+E  +L+AEM      P  VTY+ILI S
Sbjct: 262 AELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS 321

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D A+ VL  M++    P   SY+P+I+ LC EG++DL +  +D M    C P+
Sbjct: 322 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 381

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              YN  LA LC  G   +A  I   L           Y  +I++L   G   +A  ++ 
Sbjct: 382 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 441

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  PD  TY+SLI  LC +GL+EEA+ +   ME+  ++P V ++N +LLGLCK R
Sbjct: 442 AMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 501

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           R D ++ +F  MIEKG  PNETTY +L+EGI        + E+   L  R V+S+ + +R
Sbjct: 502 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKR 561

Query: 557 L 557
           L
Sbjct: 562 L 562



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 205/394 (52%), Gaps = 1/394 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++  A   L RM ++G  PD+V    ++  LC   K+  A+KV++ ++    +P   +Y
Sbjct: 151 NRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY 210

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+     +G +  AM+L+E+M   G   +  TYN+++RG+C  G + ++ + +  L  
Sbjct: 211 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 270

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG  P+  +Y+ LL A   +       KL+ ++ ++G +PN V+Y++L++ LC+ GR +E
Sbjct: 271 KGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDE 330

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           AI   + +  K   P+  SY+ L+ +LC EGR + A  ++  M      P IV YN ++ 
Sbjct: 331 AISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILA 390

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +L  +G  + AL++ +++      P+ +SYN +I+ L S G     +  +  M  +   P
Sbjct: 391 ALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDP 450

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +E TYN L + LC  G V+EA  ++  +           Y  V+  LC+  +   A  + 
Sbjct: 451 DEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMF 510

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
            EM + G  P+  TY  LI G+   G   EA+E+
Sbjct: 511 AEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 208/404 (51%), Gaps = 11/404 (2%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYN-------SLVRGLCMLGNL 184
           S +T +V C     N G+  +   K+       P +  +Y+        L+   C  G  
Sbjct: 25  SHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKF 84

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           N+SL FL+ L+ KG  P+    + L++  +  + +  A +++ +I+    +P++ +YN +
Sbjct: 85  NESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAV 143

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           ++G CK  R E A +    + ++GF P++V+YNI++ SLC   +   A ++L ++   + 
Sbjct: 144 ISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNC 203

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            PT++TY ILI +    G  + A+K+L+EM+     P   +YN II  +C EG V+   +
Sbjct: 204 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 263

Query: 365 CLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            +  +  + CKP+  +YN  L      GK  E   ++  + ++     +  Y  +I+SLC
Sbjct: 264 LITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLC 323

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R G+  +A  +L  M +   TPD+Y+Y  LI  LC EG ++ A+ I   M      PD+ 
Sbjct: 324 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIV 383

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           N+N +L  LCK+   + +LE+F  +   G  PN ++Y  ++  +
Sbjct: 384 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 35/228 (15%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++++A   L+ M+ K   PD      L+  LCK  ++  AI +M+ M+S+G +PD  
Sbjct: 324 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIV 383

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT-------------------------- 168
           +Y  ++  LCK GN   A+++  K+   G P N                           
Sbjct: 384 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAM 443

Query: 169 ---------VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
                    +TYNSL+  LC  G + +++  LD + Q G  P   +Y+ +L    K R +
Sbjct: 444 ISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRI 503

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             A+ +  ++I KG +PN  +Y +L+ G+   G   EA+     L S+
Sbjct: 504 DDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 281/483 (58%), Gaps = 13/483 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L++A     R+V    +PD      L+  L  + +  +A +V+     +   PD  
Sbjct: 77  RRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVM 127

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V   C  G +  A +LV +M       +  TYN+L+RGLC  G    +L  LD +
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 184

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++  VP+  TY+ LLEA  K  G   AMKLLD++  KG  P++V+YNV++ G+C+EGR 
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 244

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++AI F ++LPS G EPN VSYNI+L+ LC   RWE+A EL+ EM      P +VT+N+L
Sbjct: 245 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 304

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G  + AL+VL+++ K    P++ SYNP++   C + K+D  +  LD M  R C
Sbjct: 305 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 364

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  +YN  L  LC  G+V  A  ++  L +K  +     Y  VI  L + GKT +A +
Sbjct: 365 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 424

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM   G  PD  TYS++  GLC E  IE+A+  F  +++   +P+   +NA++LGLC
Sbjct: 425 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 484

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K R T  ++++F  MI  G MPNE+TYTIL+EG+A++  ++ + ++L EL  R VV +S 
Sbjct: 485 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSL 544

Query: 554 VER 556
           + +
Sbjct: 545 INK 547



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 50/102 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ DA     ++   G +P+ V    ++  LCK  +   AI +   M+ +G +P+ S
Sbjct: 450 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 509

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           +YT L+  L  +G +  A  L++++   G    ++     +R
Sbjct: 510 TYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIR 551


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 182/484 (37%), Positives = 285/484 (58%), Gaps = 4/484 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L +    LE M +KG  PDVV  T L+ + CK  + K A ++M ++  SG + DA+
Sbjct: 81  RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+N  CK G +  A+++   ++      N  TY++++  LC  G L Q++Q LDR 
Sbjct: 141 SYNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q    P+  T + L++A  KE GV  AMKL +++  KG KP++V+YNVL+ G CKEGR 
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI F + LPS G + +V+S+N++LRSLC  GRW +A +LLA M      P++VT+NIL
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G    AL VL+ M K    P++ S+NP+I   C+   +D  ++ L+ M  R C
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGC 377

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN  L  LC  GKV +A  I+  L +K  S     Y  VI  L + GK   A +
Sbjct: 378 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 437

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM   G  PD  T +S++ GL  EG + EA++ F  ++ +  KP+   +N++++GLC
Sbjct: 438 LLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLC 497

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K+++T L+++    M+  G  P E +YT L++GI ++   E ++++  EL  R +V +S 
Sbjct: 498 KAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSL 557

Query: 554 VERL 557
           + ++
Sbjct: 558 IVKV 561



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 164/314 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  +  A      M  KG KPDVV    L+   CK  ++ +AI  ++ + S G  
Sbjct: 214 DATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQ 273

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  S+  ++  LC  G    AM+L+  M   G   + VT+N L+  LC  G L ++L  
Sbjct: 274 SDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNV 333

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ + + G  PN+ +++ L++     +G+  A++ L+ ++++G  P++V+YN+LLT LCK
Sbjct: 334 LEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCK 393

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +G+ ++A+     L SKG  P+++SYN ++  L   G+ E A ELL EM      P ++T
Sbjct: 394 DGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLIT 453

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
              ++G L+  GK   A+K    +     +P+A  YN I+  LC   +  L +  L  M 
Sbjct: 454 CTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMV 513

Query: 371 HRRCKPNEGTYNGL 384
              CKP E +Y  L
Sbjct: 514 ANGCKPTEASYTTL 527



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 157/336 (46%), Gaps = 39/336 (11%)

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           L  L + G  EE  RF   + +KG  P+VV+   L+R  C  GR + A  ++  ++    
Sbjct: 76  LCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGA 135

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
                +YN+LI +    G+ + AL+VLD        P+AA+Y+ ++  LC  GK+   ++
Sbjct: 136 VIDANSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQ 192

Query: 365 CLD-----------------------------------QMFHRRCKPNEGTYNGLAM-LC 388
            LD                                   +M  + CKP+  TYN L    C
Sbjct: 193 VLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFC 252

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             G++ EA   ++ L +    S    +  ++ SLC  G+   A +LL  M + G  P   
Sbjct: 253 KEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVV 312

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           T++ LI  LC +GL+ +AL +  +M ++ + P+  +FN L+ G C  +  D ++E  ++M
Sbjct: 313 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIM 372

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + +G  P+  TY IL+  +    +++ +  +L +L 
Sbjct: 373 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 408


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  331 bits (849), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 173/484 (35%), Positives = 280/484 (57%), Gaps = 2/484 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K N++   LE +VSKG KPDVV  T L+     +  +KKA++VME++ + G  PD  
Sbjct: 74  RAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGD-PDVY 132

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +++   K   +  A Q+ ++M   G+  + VTYN ++  LC  G L  + + +D L
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL 192

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  TY+ L+EA   E  ++ A++L D+++++G +P+L +YN ++ G+CKEG  
Sbjct: 193 LKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGME 252

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+ F R L ++G  P+VVSYNILLRS   + RWE+   L+ +M      P +VT++IL
Sbjct: 253 DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSIL 312

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I S    G+   A+ VL+ M +    P + SY+P+I+  C EG++DL ++ L++M    C
Sbjct: 313 ISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+   YN  LA LC  G    A  + + L           Y  + ++L   G   +A +
Sbjct: 373 LPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALE 432

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           ++ EM + G  PD  TY+SLI  LC +GL++EA+ + V ME   ++P V +FN +LLG+C
Sbjct: 433 MISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMC 492

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K+ R    +E+   M+EKG +PNET+Y +L+EGIA+      + E+   L    V+S  +
Sbjct: 493 KAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDS 552

Query: 554 VERL 557
            +RL
Sbjct: 553 SKRL 556


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 169/484 (34%), Positives = 278/484 (57%), Gaps = 2/484 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K N++   LE MV KG+ PDV+  T L+     +  + KA +VME++   G  PD  
Sbjct: 81  RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGK-PDVF 139

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++   K   +  A +++++M+  G+  + VTYN ++   C  G L+ +L+  + L
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++    P   TY+ L+EA   + G+  AMKLLD++++KG +P+ ++YN ++ G+CKE   
Sbjct: 200 LKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMV 259

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A    R L S+G +P++++YNILLR+L   G+W E  +L++EM      P +VT++IL
Sbjct: 260 DKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSIL 319

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG+L   GK + A+ +L  M +   +P A  Y+P+IA  C EG++DL  + L+ M    C
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+   YN  +A LC  GK  +A  + + L           Y  + ++L   G  Y+A +
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           ++ ++   G  PD  TY+SLI  LC +G+++EA+E+ V M+   Y+P+V ++N +LLGLC
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K  R + ++EV   M EKG  PNETTY +L+EGI        + E+   L     +SE +
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDS 559

Query: 554 VERL 557
             RL
Sbjct: 560 FNRL 563


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 187/505 (37%), Positives = 287/505 (56%), Gaps = 20/505 (3%)

Query: 62  PNRKPGNNNDTRH-----RDHKLNDAFLQLERMVSKGHKPDVVQATN----LLYDLCKAN 112
           P RK  + + T       R  +L+DA   ++ +   G  P    A      L+  LC + 
Sbjct: 61  PRRKASSASATERLRVLVRRGELDDALRLVDSLA--GLNPPSPAAVGPCAALIKKLCASG 118

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           +   A +V+    +SG  PD   Y  +V   C  G +  A +LV  M       +  TYN
Sbjct: 119 RTADARRVL---AASG--PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYN 170

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           +L+RGLC  G  + +L  L+ + ++G +P+  TY+ LLEA  K  G   AMKLLD++  K
Sbjct: 171 TLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDK 230

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G  P++V+YNV+L G+C+EGR E+A+ F ++LPS G EPN VSYNI+L+ L    RWE+A
Sbjct: 231 GCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDA 290

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            +L+ EM      P +VT+N+LI  L   G  + A++VL++M +    P++ SYNP++  
Sbjct: 291 EKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHA 350

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
            C + K+   ++ ++ M  R C P+  +YN  L  LC  G+V  A  ++  L +K  S  
Sbjct: 351 FCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPV 410

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  VI  L + GKT +A +LL EMT  G  PD  TYS++  GLC E  IEEA+  F 
Sbjct: 411 LISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFC 470

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            +++   +P    +NA+LLGLCK R T  ++++F  MI  G MPNE+TYTILVEG+A++ 
Sbjct: 471 KVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEG 530

Query: 532 ELELSAEVLKELQLRQVVSESAVER 556
            ++ + E+  +L  R VV++  +++
Sbjct: 531 LVKEARELFAQLCSRGVVNKKLMKK 555


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 271/473 (57%), Gaps = 13/473 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L++A     R+V    +PD      L+  L  + +  +A +V+     +   PD  
Sbjct: 79  RRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVM 129

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++   C  G V  A +      +     +  T ++L+RGLC  G    +L  LD +
Sbjct: 130 AYNAMMAGYCGAGQVDAARRWCA---ERAVERDAYTCDTLIRGLCGRGRTANALAVLDEM 186

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++  VP+  TY+ LLEA  K  G   AMKLLD++  KG  P++V+YNV++ G+C+EGR 
Sbjct: 187 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 246

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++AI F ++LPS G EPN VSYNI+L+ LC   RWE+A EL+ EM      P +VT+N+L
Sbjct: 247 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 306

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G  + AL+VL+++ K    P++ SYNP++   C + K+D  +  LD M  R C
Sbjct: 307 ISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 366

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  +YN  L  LC  G+V  A  ++  L +K  +     Y  VI  L + GKT +A +
Sbjct: 367 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 426

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM   G  PD  TYS++  GLC E  IE+A+  F  +++   +P+   +NA++LGLC
Sbjct: 427 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 486

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           K R T  ++++F  MI  G MPNE+TYTIL+EG+A++  ++ + ++L EL  R
Sbjct: 487 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 539



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 102/196 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A   L+ MVS+G  PD+V    LL  LC++ ++  A++++  +   G  P   
Sbjct: 347 KQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 406

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +++ L K G    A++L+ +M   G   + +TY+++  GLC    +  +++   ++
Sbjct: 407 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 466

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ PN   Y+ ++    K R  H+A+ L   +I  G  PN  +Y +L+ GL  EG  
Sbjct: 467 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 526

Query: 255 EEAIRFFRDLPSKGFE 270
           +EA     +L S+G E
Sbjct: 527 KEARDLLDELCSRGEE 542


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 173/485 (35%), Positives = 274/485 (56%), Gaps = 3/485 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K +++   L+ MV++G+KPDV+  T L+       K++KAI+VME++   G  PD  
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK-PDVF 147

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  CK   V +A +++++M+  G+  + VTYN L+   C  G L+ +L+ +D+L
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++    P   TY+ L+EA   + G+  AMKLLD+++++G +P+  +YNV++ G+CKEG  
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGML 267

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A  F   +   G    V +YNILLR L  EG+WE   +L+++M      P  +TY+ L
Sbjct: 268 DRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTL 327

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   GK D A  VL  M +    P   SY+P+I+ LC EGKVDL ++ LD M     
Sbjct: 328 ITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGH 387

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  +YN  LA LC  G   EA  I + LG          Y  +  +L   G   +A  
Sbjct: 388 LPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALG 447

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGL 492
           ++ EM   G  PD  TY+SLI  LC +GL+++A+E+ V M E    +P V ++N +LLGL
Sbjct: 448 MILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGL 507

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           CK +R   ++EV   M+ +G +PNETTYT+L++GI        + E+   L     +SE 
Sbjct: 508 CKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMDAISED 567

Query: 553 AVERL 557
           + +R 
Sbjct: 568 SFKRF 572



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 18/218 (8%)

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC--------GVGKVQEAFAIIQSL 403
           R C   K D  +  L  M +R  KP+        +LC         + K+++A  +++ L
Sbjct: 86  RSCKSAKYDESLYFLQHMVNRGYKPD-------VILCTKLIKGFFNMKKIEKAIQVMEIL 138

Query: 404 GNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
             +++  P  F Y  VI+  C+  +   A ++L  M K GF PD  TY+ LI   C  G 
Sbjct: 139 --EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++ AL +   + + + KP V  +  L+         D ++++   M+ +G  P+  TY +
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +V G+  +  L+ + E L  +     V+  +   ++++
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLR 294


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 167/413 (40%), Positives = 250/413 (60%), Gaps = 4/413 (0%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V   C  G +  A +LV +M       +  TYN+L+RGLC  G    +L  LD +
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++  VP+  TY+ LLEA  K  G   AMKLLD++  KG  P++V+YNV++ G+C+EGR 
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++AI F ++LPS G EPN VSYNI+L+ LC   RWE+A EL+ EM      P +VT+N+L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G  + AL+VL+++ K    P++ SYNP++   C + K+D  +  LD M  R C
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  +YN  L  LC  G+V  A  ++  L +K  +     Y  VI  L + GKT +A +
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM   G  PD  TYS++  GLC E  IE+A+  F  +++   +P+   +NA++LGLC
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 358

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           K R T  ++++F  MI  G MPNE+TYTIL+EG+A++  ++ + ++L EL  R
Sbjct: 359 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 204/390 (52%), Gaps = 34/390 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A   L+ M+ +   PDVV  T LL   CK +  K+A+K+++ M   G  PD  +Y  +V
Sbjct: 50  NALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 109

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N +C++G V  A++ ++ +  YG   NTV+YN +++GLC       + + +  + QKG  
Sbjct: 110 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 169

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN  T++ L+    ++  V  A+++L+ I   G  PN +SYN LL   CK+ + ++A+ F
Sbjct: 170 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 229

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              + S+G  P++VSYN LL +LC  G  + A ELL ++     +P +++YN +I  L  
Sbjct: 230 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 289

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GKT  AL++L+EMV    +P   +Y+ I A LC E +++  ++                
Sbjct: 290 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR---------------- 333

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
                          AF  +Q +G + N+     Y  +I  LC++ +T+ A  L   M  
Sbjct: 334 ---------------AFGKVQDMGIRPNTV---LYNAIILGLCKRRETHSAIDLFAYMIG 375

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
            G  P+  TY+ LI GL  EGLI+EA ++ 
Sbjct: 376 NGCMPNESTYTILIEGLAYEGLIKEARDLL 405



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 161/306 (52%), Gaps = 4/306 (1%)

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           ++YN ++ G C  G+ + A R   ++P    EP+  +YN L+R LC  GR   A  +L E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P +VTY IL+ +         A+K+LDEM      P   +YN ++  +C EG+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           VD  ++ L  +    C+PN  +YN  L  LC   + ++A  ++  +G K        +  
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I+ LCRKG    A ++L ++ KYG TP+S +Y+ L+   C +  +++A+    +M    
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             PD+ ++N LL  LC+S   D+++E+   + +KG  P   +Y  +++G+    + + + 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 538 EVLKEL 543
           E+L E+
Sbjct: 298 ELLNEM 303



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 162/298 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +++DA   L+ + S G +P+ V    +L  LC A + + A ++M  M   G  P+  
Sbjct: 114 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 173

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ LC+KG V  A++++E++  YG   N+++YN L+   C    +++++ FLD +
Sbjct: 174 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G  P+  +Y+ LL A  +   V  A++LL  +  KG  P L+SYN ++ GL K G+T
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 293

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+    ++ SKG +P++++Y+ +   LC E R E+A     ++      P  V YN +
Sbjct: 294 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 353

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I  L    +T  A+ +   M+     P+ ++Y  +I  L  EG +      LD++  R
Sbjct: 354 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 141/272 (51%), Gaps = 4/272 (1%)

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           ++YN ++   C  G+ + A  L+AEM      P   TYN LI  L   G+T +AL VLDE
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
           M++ R  P   +Y  ++   C        +K LD+M  + C P+  TYN +   +C  G+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           V +A   +++L +         Y  V+  LC   +   A +L+ EM + G  P+  T++ 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI  LC +GL+E ALE+   + +Y   P+  ++N LL   CK ++ D ++    +M+ +G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             P+  +Y  L+  +    E++++ E+L +L+
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 101/196 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A   L+ MVS+G  PD+V    LL  LC++ ++  A++++  +   G  P   
Sbjct: 219 KQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 278

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +++ L K G    A++L+ +M   G   + +TY+++  GLC    +  +++   ++
Sbjct: 279 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 338

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ PN   Y+ ++    K R  H+A+ L   +I  G  PN  +Y +L+ GL  EG  
Sbjct: 339 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 398

Query: 255 EEAIRFFRDLPSKGFE 270
           +EA     +L S+  E
Sbjct: 399 KEARDLLDELCSRAGE 414


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 161/374 (43%), Positives = 239/374 (63%), Gaps = 1/374 (0%)

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           ++ LDR ++K   P+  TY+ L+EA   E GV  AMKLLD++ ++G KP++V+YNVL+ G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           +CKEGR +EAI+F   +PS G +PNV+++NI+LRS+C  GRW +A +LL EM     SP+
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           +VT+NILI  L   G    A+ +L++M      P++ SYNP++   C E K+D  ++ L+
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            M  R C P+  TYN  L  LC  GKV  A  ++  L +K  S     Y  VI  L + G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           KT QA +LL+EM   G  PD  TYSSLI GL  EG +EEA++ F  +E +  KP+   +N
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +++ GLCK+++TD +++    MI KG  P E +YTIL+EGIA++   + + E+L EL  R
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360

Query: 547 QVVSESAVERLVMQ 560
            VV +S+ E++V++
Sbjct: 361 GVVKKSSAEQVVVR 374



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 199/385 (51%), Gaps = 34/385 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+R + K   PDV+  T L+   C  + + +A+K+++ M S G  PD  +Y  LVN +CK
Sbjct: 4   LDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCK 63

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G +  A++ +  M  YG   N +T+N ++R +C  G    + + L  +++KG  P+  T
Sbjct: 64  EGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVT 123

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+    ++  +  A+ +L+ +   G  PN +SYN LL G CKE + + AI++   + 
Sbjct: 124 FNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMV 183

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S+G  P++V+YN +L +LC +G+ + A ELL ++     SP ++TYN +I  L+  GKTD
Sbjct: 184 SRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTD 243

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+++L EM     +P   +Y+ +IA L  EGKV+  +K    +     KPN  TYN   
Sbjct: 244 QAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS-- 301

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
                                           ++  LC+  +T +A   L  M   G  P
Sbjct: 302 --------------------------------IMFGLCKAQQTDRAIDFLAYMISKGCKP 329

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIF 470
              +Y+ LI G+  EGL +EALE+ 
Sbjct: 330 TEVSYTILIEGIANEGLAKEALELL 354



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 180/329 (54%), Gaps = 1/329 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +  A   L+ M S+G KPDVV    L+  +CK  ++ +AIK +  M S G  P+  ++  
Sbjct: 32  VGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNI 91

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++  +C  G    A +L+ +M   G   + VT+N L+  LC  G L +++  L+++   G
Sbjct: 92  ILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG 151

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN+ +Y+ LL    KE+ +  A++ L+ ++++G  P++V+YN +LT LCK+G+ + A+
Sbjct: 152 CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAV 211

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                L SKG  P +++YN ++  L   G+ ++A ELL EM G    P ++TY+ LI  L
Sbjct: 212 ELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGL 271

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
           +  GK + A+K   ++     +P+A +YN I+  LC   + D  +  L  M  + CKP E
Sbjct: 272 SREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTE 331

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            +Y  L   +   G  +EA  ++  L ++
Sbjct: 332 VSYTILIEGIANEGLAKEALELLNELCSR 360



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 172/298 (57%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L++A   L  M S G +P+V+    +L  +C   +   A K++  MV  G  P   
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LC+KG +G A+ ++EKM  +G   N+++YN L+ G C    +++++Q+L+ +
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G  P+  TY+ +L A  K+  V AA++LL+ + +KG  P L++YN ++ GL K G+T
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+    ++  KG +P+V++Y+ L+  L  EG+ EEA +   +++G    P   TYN +
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +  L    +TD A+  L  M+    +P+  SY  +I  + +EG     ++ L+++  R
Sbjct: 303 MFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 114/207 (55%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K++ A   LE MVS+G  PD+V    +L  LCK  K+  A++++  + S G  P   
Sbjct: 168 KEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLI 227

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ L K G    A++L+ +M   G   + +TY+SL+ GL   G + ++++F   +
Sbjct: 228 TYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ PNAFTY+ ++    K +    A+  L  +I+KG KP  VSY +L+ G+  EG  
Sbjct: 288 EGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLA 347

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLR 281
           +EA+    +L S+G      +  +++R
Sbjct: 348 KEALELLNELCSRGVVKKSSAEQVVVR 374


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 182/539 (33%), Positives = 293/539 (54%), Gaps = 30/539 (5%)

Query: 39  KGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRH--------RDHKLNDAFLQLERMV 90
           KG  RV +S            T+P ++  +  DT H        +  K  +A   LE+MV
Sbjct: 56  KGHTRVTSSD-----------TRPQQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMV 104

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVG 150
            +G+KPDV+  T L+  L  + + +KA++VME++   G  PD+ +Y  +++  C+     
Sbjct: 105 KRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD-PDSFAYNAVISGFCRSDRFD 163

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
            A +++ +M+  G+  + VTYN L+  LC  G L+ +L+ +D+L++    P   TY+ L+
Sbjct: 164 AANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILI 223

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           EA      +  AM+LLD+++++G +P++ +YNV++ G+CK G  + A  F  +L +    
Sbjct: 224 EATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTT--- 280

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P++  YN+LL+ L  EGRWE    L+++M      P IVTY++LI SL   GK   A+ V
Sbjct: 281 PSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDV 340

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCG 389
           L  M +    P A  Y+P+I+  C EGKVDL +  +D M      P+   YN  +  LC 
Sbjct: 341 LRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCK 400

Query: 390 VGKVQEAFAIIQSL---GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            G+  EA  I + L   G   N+S    Y  +  +L   G   +A  ++ EM   G  PD
Sbjct: 401 KGRADEALNIFKKLEEVGCPPNASS---YNTMFGALWSSGDKIRALTMILEMLSNGVDPD 457

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+SLI  LC +G+++EA+ + V ME  +++P V ++N +LLGLCK+ R   ++EV  
Sbjct: 458 RITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLA 517

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
           +M++ G  PNETTYT+LVEG+ +      + E+ K L     +S+    RL  Q  F  
Sbjct: 518 VMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMNAISQDLFRRLQKQNHFRA 576


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 159/471 (33%), Positives = 268/471 (56%), Gaps = 3/471 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV+K ++PDV+  T L+     +  + KA +VM ++   G  PD  +Y  +++  CK   
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANR 59

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ-KGLVPNAFTYS 207
           +  A  ++++M+  G+  + VT+N ++   C  G ++ +L+  + L++     P   TY+
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+EA   E G+  A+KLLD+++++G +P+  +YNV+  GLCKEG+ + A  F R L S+
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G +P+V++YNILLR+L  +G+W+E  + ++E+      P +VTY+ILI SL   GK + +
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
           + ++  M +    P A  Y+P+IA  C EGK+D+ ++ LD M      P+   YN  +A 
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  G    A  I   L           Y  ++++L   G  Y+A  ++ +M   G  PD
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+SLI  LC +G+++EA+ +   M    ++P++ ++  +LLGLCK+ R D ++EV  
Sbjct: 360 VITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLA 419

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
            MIE G  PNETTYT+L+EGI        + E+   L +   +SE + +RL
Sbjct: 420 AMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDSFKRL 470



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 210/397 (52%), Gaps = 2/397 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME-MMVSSGIIPDA 133
           + +++  A   L+RM  KG  PDVV    ++   C   K+  A+KV E ++  +   P  
Sbjct: 56  KANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTL 115

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT L+     +G +  A++L+++M   G   +T TYN + RGLC  G ++++ +F+  
Sbjct: 116 ITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRT 175

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L  +G  P+  TY+ LL A   +       K + +I ++G +PN+V+Y++L++ LC++G+
Sbjct: 176 LNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGK 235

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EE++   + +  KG  P+   Y+ L+ + C EG+ + A E L  M      P IV YN 
Sbjct: 236 IEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNT 295

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           ++ +L  +G  DHA+++  ++ +    P+ +SYN +++ L S G     +  + QM  + 
Sbjct: 296 IMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKG 355

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P+  TYN L + LC  G V EA  ++  + + +       YK V+  LC+  +   A 
Sbjct: 356 IDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAI 415

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           ++L  M + G  P+  TY+ LI G+   G   +A+E+
Sbjct: 416 EVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 147/257 (57%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++    +  + S+G +P+VV  + L+  LC+  K+++++ ++++M   G+ PDA  Y 
Sbjct: 200 KWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYD 259

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C++G +  A++ ++ M   G+  + V YN+++  LC  GN + +++   +L + 
Sbjct: 260 PLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEV 319

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  +Y+ +L A +     + A+ ++  +++KG  P++++YN L++ LC++G  +EA
Sbjct: 320 GCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEA 379

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I    D+ S  F+PN+VSY  +L  LC   R ++A E+LA M      P   TY +LI  
Sbjct: 380 IGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEG 439

Query: 318 LAYHGKTDHALKVLDEM 334
           + + G    A+++ + +
Sbjct: 440 IGFSGSRTQAMELANSL 456



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 94/190 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ KL+ A   L+ M+  G  PD+V    ++  LCK      A+++   +   G  P+ S
Sbjct: 267 REGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVS 326

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +++ L   G+   A+ ++ +M   G   + +TYNSL+  LC  G +++++  L  +
Sbjct: 327 SYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADM 386

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +     PN  +Y  +L    K   +  A+++L  +I  G +PN  +Y +L+ G+   G  
Sbjct: 387 LSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSR 446

Query: 255 EEAIRFFRDL 264
            +A+     L
Sbjct: 447 TQAMELANSL 456


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  295 bits (755), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 171/494 (34%), Positives = 266/494 (53%), Gaps = 16/494 (3%)

Query: 61  KPNRKPGNNNDTRHRD----HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKK 116
           KP  + G   + R R      +L+ A   +  +   G  P V+    L+  LC   ++  
Sbjct: 55  KPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVAD 114

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A +V+E +  S  I    +Y  +VN  C+ GN+  A ++++ +    +  +T TYN L+R
Sbjct: 115 AERVVEALGPSATI---ITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIR 168

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            LC+ G +  +L   D ++ +G  P+  TYS LL+A  KE G   A+ LLD++ +KG +P
Sbjct: 169 ALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEP 228

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           ++V+YNVL+  +C +G   EA++    LPS G +P+ V+Y  +L+SLC   RWEEA++LL
Sbjct: 229 DIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLL 288

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            +M   D +P  VT+N +I SL   G    A KVL +M +    P   +Y+ I+  LC E
Sbjct: 289 TKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKE 348

Query: 357 GKVDLVVKCLD----QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
            +VD  +K L     +M  + C P++ T+N  +  LC  G    A  ++  +        
Sbjct: 349 RRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPD 408

Query: 412 QEFYKYVITS-LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
              Y  ++   LC+  KT +A  LL  M   G  PD+ TY SL  GL  E  +E A+ +F
Sbjct: 409 ITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMF 468

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             ++     PD   +NA+LLGLCK  RTDL+++ F  M+  G MP+E+TY ILVEGIA++
Sbjct: 469 RRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYE 528

Query: 531 DELELSAEVLKELQ 544
             LE + E+L  L 
Sbjct: 529 GFLEEAKELLGNLS 542



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 159/314 (50%), Gaps = 8/314 (2%)

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           N  L GL + G  + A+R    +   G +P V+  NIL++ LC +GR  +A  ++  +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALG- 123

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              S TI+TYN ++      G  D A +++D +    F P   +YNP+I  LC  G V  
Sbjct: 124 --PSATIITYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLD 178

Query: 362 VVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +   D M HR C P+  TY+ L    C     ++A  ++  + +K        Y  +I 
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           ++C +G   +A ++L  +  YG  PD+ TY+ +++ LC     EEA ++   M   D  P
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D   FNA++  LC+      + +V   M E G  P+  TY+ +++G+  +  ++ + ++L
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 541 KELQLRQVVSESAV 554
           KEL L ++VS++ +
Sbjct: 359 KEL-LAEMVSKNCI 371


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 152/354 (42%), Positives = 225/354 (63%), Gaps = 1/354 (0%)

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +SF ++   KE GV  AMKLLD++  KG KP++V+YNVL+ G+CKEGR +EAI+F  ++P
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S G +PNV+++NI+LRS+C  GRW +A +LL++M     SP++VT+NILI  L   G   
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A+ +L++M      P++ SYNP++   C E K+D  ++ LD M  R C P+  TYN  L
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  GKV  A  I+  L +K  S     Y  VI  L + GKT +A +LL EM + G  
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TYSSL+ GL  EG ++EA++ F  +E    +P+   +N+++LGLCKSR+TD +++ 
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
              MI K   P E TYTIL+EGIA++   + + ++L EL  R +V +S+ E++ 
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVA 438



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 183/338 (54%), Gaps = 5/338 (1%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           T  ++  +  A   L+ M +KG KPDVV    L+  +CK  ++ +AIK +  M S G  P
Sbjct: 91  TTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP 150

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  ++  ++  +C  G    A +L+  M   G   + VT+N L+  LC  G L +++  L
Sbjct: 151 NVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDIL 210

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           +++   G  PN+ +Y+ LL    KE+ +  A++ LD ++++G  P++V+YN LLT LCK+
Sbjct: 211 EKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKD 270

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ + A+     L SKG  P +++YN ++  L   G+ E A +LL EM      P I+TY
Sbjct: 271 GKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITY 330

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           + L+  L+  GK D A+K   ++     RP+A +YN I+  LC   + D  +  L  M  
Sbjct: 331 SSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS 390

Query: 372 RRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNK 406
           +RCKP E TY    ++ G+   G  +EA  ++  L ++
Sbjct: 391 KRCKPTEATYT--ILIEGIAYEGLAKEALDLLNELCSR 426



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 184/341 (53%), Gaps = 7/341 (2%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           S +++ V   CK+  VG AM+L+++M + G   + VTYN L+ G+C  G L+++++FL+ 
Sbjct: 83  SGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 142

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G  PN  T++ +L +         A KLL D++ KG  P++V++N+L+  LC++G 
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 202

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              AI     +P  G  PN +SYN LL   C E + + A E L  M      P IVTYN 
Sbjct: 203 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+ +L   GK D A+++L+++      P   +YN +I  L   GK +  +K LD+M  + 
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 322

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            KP+  TY+ L + L   GKV EA   F  ++ LG + N+     Y  ++  LC+  +T 
Sbjct: 323 LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT---YNSIMLGLCKSRQTD 379

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           +A   L  M      P   TY+ LI G+  EGL +EAL++ 
Sbjct: 380 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 420



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 108/195 (55%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K++ A   L+ MVS+G  PD+V    LL  LCK  K+  A++++  + S G  P   
Sbjct: 234 KEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLI 293

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ L K G    A++L+++M   G   + +TY+SLV GL   G ++++++F   L
Sbjct: 294 TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ PNA TY+ ++    K R    A+  L  +I+K  KP   +Y +L+ G+  EG  
Sbjct: 354 EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA 413

Query: 255 EEAIRFFRDLPSKGF 269
           +EA+    +L S+G 
Sbjct: 414 KEALDLLNELCSRGL 428



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 35/217 (16%)

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           + C++Q     C    G    +   C    V +A  ++  + NK +      Y  +I  +
Sbjct: 68  ICCINQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 127

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG-------------------------- 456
           C++G+  +A + L  M  YG  P+  T++ ++R                           
Sbjct: 128 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 187

Query: 457 ---------LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
                    LC +GL+  A++I   M  +   P+  ++N LL G CK ++ D ++E   +
Sbjct: 188 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 247

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           M+ +G  P+  TY  L+  +    +++++ E+L +L 
Sbjct: 248 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 284



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 58/123 (47%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   A   L+ M  KG KPD++  ++L+  L +  K+ +AIK    +   GI P+A +Y 
Sbjct: 307 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 366

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK      A+  +  M          TY  L+ G+   G   ++L  L+ L  +
Sbjct: 367 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 426

Query: 198 GLV 200
           GLV
Sbjct: 427 GLV 429


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 261/486 (53%), Gaps = 9/486 (1%)

Query: 78  KLNDAFLQLERMVSKGHK--PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           ++++A +  + M S G +  P VV    L+  LC   ++  A +V   +  S  +    +
Sbjct: 165 EIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPSATV---VT 221

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +VN  C+ G +  A +L+  M    +P +T T+N L+R LC+ G +  +L   D ++
Sbjct: 222 YNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDDML 278

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            +G  P+  TYS LL+A  KE G   AM LLD++ AKG +P++V+YNVL+  +C EG  +
Sbjct: 279 HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 338

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA+    +LPS G +P+ V+Y  +L+SLC   RW+E  ELLAEM   + +P  VT+N ++
Sbjct: 339 EALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIV 398

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            SL   G  D A++V+D M +        +Y+ I+  LC  G+VD  V+ L ++    CK
Sbjct: 399 TSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 458

Query: 376 PNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+   Y   L  LC   + + A  ++  +        +  +  V+ SLC+KG   +A ++
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRV 518

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + +M++ G +PD  TY+ +I GLC E  I++A+E+   ++    KPD+  FN LL GLC 
Sbjct: 519 VEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCG 578

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             R + + ++   M+     P+E T+  ++  +  +  L  + E LK +     V  S+ 
Sbjct: 579 VDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSST 638

Query: 555 ERLVMQ 560
             +V+ 
Sbjct: 639 YSIVVD 644



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 256/479 (53%), Gaps = 5/479 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A   L  + S G KPD V  T +L  LC + + K+  +++  M S+   PD  ++  
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V  LC++G V  A+++V+ M ++G   + VTY+S++ GLC +G ++ +++ L RL   G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+   Y+ +L+          A +L+ +++     P+ V++N ++  LC++G  + AI
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R    +   G  P++V+YN ++  LC E   ++A ELL+++      P IVT+N L+  L
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + + A +++  M++    P   ++N +I  LC +G +   ++ L  M    C PN 
Sbjct: 577 CGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNS 636

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            TY+ +   L   GK Q A  ++  +    N +P    Y  VI++L + GK  +A  LL 
Sbjct: 637 STYSIVVDALLKAGKAQAALELLSGM---TNGTPDLITYNTVISNLTKAGKMEEALDLLR 693

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  PD+ TY SL  G+C E   + A+ +   +++    PD   +N +LLG C+ R
Sbjct: 694 VMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDR 753

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           RTDL+++ F  M+  G MP+E+TY IL+E +A+   L+ +  +L  L    V+ +  +E
Sbjct: 754 RTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKKLIE 812



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 57/123 (46%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   L  MVS G  PD     +L Y +C+ +   +A++++  +  +G+ PD + Y 
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYN 743

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++   C+      A+     M   G   +  TY  L+  L   G L+++ + L  L   
Sbjct: 744 DVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSL 803

Query: 198 GLV 200
           G++
Sbjct: 804 GVL 806



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   + A   L R+   G  PD     ++L   C+  +   AI     MVSSG +PD S
Sbjct: 716 REDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDES 775

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +Y  L+  L   G +  A +L+  +   G
Sbjct: 776 TYVILLEALAYGGLLDEAKRLLASLCSLG 804


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/471 (32%), Positives = 253/471 (53%), Gaps = 12/471 (2%)

Query: 77  HKLNDAFLQLERMVSKGHKPD-----VVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
            +++DA   ++ + S G         VV    L+  LC   ++  A +V   + +S  + 
Sbjct: 72  EEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGASATV- 130

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
              +Y  +VN  C+ G +  A +L+  M    +P +T T+N L+R LC+ G +  +L   
Sbjct: 131 --VTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVF 185

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           D ++ +G  P+  TYS LL+A  K  G   AM LLD++ AKG +P++V+YNVL+  +C E
Sbjct: 186 DDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNE 245

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  +EA+    DLPS G +P+ V+Y  +L+SLC   RW+E  EL AEM     +P  VT+
Sbjct: 246 GDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTF 305

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N ++ SL   G  D A+KV+D M +    P   +Y+ I+  LC  G+VD  V+ L ++  
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365

Query: 372 RRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             CKP+   Y   L  LC + + + A  ++  +        +  +  VI SLC+KG   +
Sbjct: 366 YGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDR 425

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +++ +M++ G  PD  TY+S+I GLC E  I++A+E+   ++ Y  KPD+  FN LL 
Sbjct: 426 AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLK 485

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           GLC   R + + ++   M+     P+ TT+  ++  +  +  L  + E LK
Sbjct: 486 GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLK 536



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 260/479 (54%), Gaps = 5/479 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A   L  + S G KPD V  T +L  LC + + K+  ++   M S+   PD  ++  
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V  LC++G V  A+++V+ M ++G   + VTY+S++ GLC +G ++ +++ L RL   G
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+   Y+ +L+          A +L+ +++     P+ V++N ++  LC++G  + AI
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +    +   G  P++V+YN ++  LC E   ++A ELL+ +      P IVT+N L+  L
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + + A +++  M+     P A ++N +I  LC +G +   ++ L  M    C PN+
Sbjct: 488 CSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQ 547

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            TYN +   L   GK QEA  ++  +    N +P    Y  VI+++ + GK  +A  LL 
Sbjct: 548 STYNIVVDALLKAGKTQEALKLLSGM---TNGTPDLITYNTVISNITKAGKMEEALDLLR 604

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G +PD+ TY SL  G+C E   + A+ +   +++    PD   +N +LLG C++ 
Sbjct: 605 VMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNW 664

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           RTD++++ F  M+  G MP+E+TY IL+E +A++  L+ + ++L  L    V+ +S +E
Sbjct: 665 RTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSLIE 723



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 40/272 (14%)

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV  NIL++ LC  GR  +A  + A +     S T+VTYN ++      G+ + A +++ 
Sbjct: 98  VVPCNILIKRLCSGGRVADAERVFATLGA---SATVVTYNTMVNGYCRAGRIEDARRLIS 154

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
            M    F P   ++NP+I  LC                                    G+
Sbjct: 155 GM---PFPPDTFTFNPLIRALCVR----------------------------------GR 177

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           V +A A+   + ++  S     Y  ++ + C+     QA  LL EM   G  PD  TY+ 
Sbjct: 178 VPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNV 237

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI  +C EG ++EAL I   +  +  KPD   +  +L  LC S R     E+F  M    
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK 297

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             P+E T+  +V  +  Q  ++ + +V+  + 
Sbjct: 298 CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMS 329



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS-----PQEFYKYVITSLCRKGKTYQAF 432
           EG    L  L    ++ +A A++ S+ +   S      P      +I  LC  G+   A 
Sbjct: 59  EGPKRRLRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAE 118

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++   +   G +    TY++++ G C  G IE+A  +   M    + PD   FN L+  L
Sbjct: 119 RVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRAL 172

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           C   R   +L VF  M+ +G  P+  TY+IL++          +  +L E++ +
Sbjct: 173 CVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAK 226



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 58/127 (45%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   L  MVS G  PD +   +L Y +C+ +   +AI+++  +   G+ PDA+ Y 
Sbjct: 595 KMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYN 654

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++   C+      A+     M   G   +  TY  L+  L     L+++ Q L  L   
Sbjct: 655 DILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSL 714

Query: 198 GLVPNAF 204
           G++  + 
Sbjct: 715 GVLDKSL 721


>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 603

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 171/493 (34%), Positives = 271/493 (54%), Gaps = 28/493 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           ++ +L++A   LE M +KG+  P V+  T L+ + CK  + K A ++M ++  SG + D 
Sbjct: 125 KNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESGAVIDI 184

Query: 134 SSYTYLVNCLCKKGNV---GYAM-----QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           + Y +   CL KK NV   GY       + +  ++      N + Y++++R LC    L 
Sbjct: 185 TIYNFF--CLPKKNNVLIGGYCXSGEVEEALRVLDCMSVSPNGINYDTILRSLCDRCKLK 242

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           Q ++ LDR +Q    P+  TY+ L++AA K+  V  AMKLL ++++K  KPN+V+YN L+
Sbjct: 243 QGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALI 302

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G+C EGR +E IRF ++LPS G++P+V+SY I+L SL   GRW +A +LLA M     S
Sbjct: 303 KGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCS 362

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
             +VT+N LI  L   G    A  VL+ + K    P++ SYNP I   C+E    L +  
Sbjct: 363 LNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCNEKSXYLEI-- 420

Query: 366 LDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
              M  R C P+  TYN  LA LC   KV +A  I++ L  K        Y  +I  L +
Sbjct: 421 ---MVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLK 477

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            GKT  A +LL E    G  P+  T++S++ G+  +G + EA++IF  +E    +P+   
Sbjct: 478 VGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFA 537

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N +++GLCK+++T            +G  P E TY ILV+GI  +   + ++++  EL 
Sbjct: 538 YNLIIMGLCKTQQTS-----------RGCKPTEATYNILVKGITSEGXPKEASKLWSELY 586

Query: 545 LRQVVSESAVERL 557
            +  V +S VE++
Sbjct: 587 SKGPVKKSLVEKI 599



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 163/315 (51%), Gaps = 16/315 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D ++  A   L  MVSK  KP+VV    L+  +C   ++ + I+ ++ + S G  
Sbjct: 268 DAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQ 327

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SYT +++ L   G    AM+L+  M   G   N VT+N+L+  LC  G L ++   
Sbjct: 328 PDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNV 387

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ + +    PN+ +Y+  +     E+  +     L+ ++++G  P++V+YN+LL  LCK
Sbjct: 388 LEMIXKHVCTPNSISYNPSIGGFCNEKSXY-----LEIMVSRGCYPDIVTYNILLAALCK 442

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           + + ++A+   + L  KG +P+V++Y+I++  L   G+ + A ELL E       P ++T
Sbjct: 443 DRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLIT 502

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +  ++G ++  GK   A+K+   +     RP+A +YN II  LC             Q  
Sbjct: 503 FTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCK-----------TQQT 551

Query: 371 HRRCKPNEGTYNGLA 385
            R CKP E TYN L 
Sbjct: 552 SRGCKPTEATYNILV 566



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 154/368 (41%), Gaps = 73/368 (19%)

Query: 248 LCKEGRTEEAIRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           L K G  +EA RF   + +KG   P V++   L+   C  GR + A  ++  ++      
Sbjct: 123 LIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESGAVI 182

Query: 307 TIVTY---------NILIGSLAYHGKTDHALKVLDEM----------------------- 334
            I  Y         N+LIG     G+ + AL+VLD M                       
Sbjct: 183 DITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCMSVSPNGINYDTILRSLCDRCKLK 242

Query: 335 ---------VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
                    ++ +  P   +Y  +I   C + +V   +K L +M  + CKPN  TYN L 
Sbjct: 243 QGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALI 302

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             +C  G++ E    +++L +         Y  V+ SL   G+   A +LL  M   G +
Sbjct: 303 KGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCS 362

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEI------------------------------FVVME 474
            +  T+++LI  LC +GL+ +A  +                                +M 
Sbjct: 363 LNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCNEKSXYLEIMV 422

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
                PD+  +N LL  LCK R+ D ++E+ + +  KG  P+  TY+I+++G+    + +
Sbjct: 423 SRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTD 482

Query: 535 LSAEVLKE 542
           L+ E+L+E
Sbjct: 483 LALELLEE 490


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 264/494 (53%), Gaps = 14/494 (2%)

Query: 54  PKDSVYTKPNRKPGNNNDTR--HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA 111
           P+    + PN  P N    R   RD  L +A   ++R  S+G  PDV   T L+ +LC+ 
Sbjct: 35  PEAPSASSPN--PANARLRRLIARD-DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRR 91

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
            +   A +V+     SG   D  +Y  LV   C+ G +  A +L+  M       +  TY
Sbjct: 92  GRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTY 148

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
             ++RGLC  G + ++L  LD ++ +G  P+  TY+ LLEA  K  G   AM++LD++ A
Sbjct: 149 TPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 208

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KG  PN+V+YNV++ G+C+EGR ++A  F   L S GF+P+ VSY  +L+ LC   RWE+
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
             EL AEM   +  P  VT+++L+      G  + A++VL++M       +    N +I 
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSS 410
            +C +G+VD   + L+ M    C P+  +Y   L  LC   + ++A  +++ +  K N  
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCP 387

Query: 411 PQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           P E  +   I  LC+KG   QA  L+ +M+++G   +  TY++L+ G C++G ++ ALE+
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M     KP+   +  LL GLC + R D + E+   M++K   PN  T+ +LV     
Sbjct: 448 FYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504

Query: 530 QDELELSAEVLKEL 543
           +  ++ + E+++++
Sbjct: 505 KGLMDEAIELVEQM 518



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 270/511 (52%), Gaps = 33/511 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A   L+ M+ +G +P VV  T LL  +CK+    +A++V++ M + G  P+  +Y 
Sbjct: 160 RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYN 219

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++G V  A + + ++  YG+  +TV+Y ++++GLC         +    +++K
Sbjct: 220 VIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +PN  T+  L+    +   V  A+++L+ +   G   N    N+++  +CK+GR ++A
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +F  ++ S G  P+ +SY  +L+ LC   RWE+A ELL EM   +  P  VT+N  I  
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 318 LAYHGKTDHALKVLDEM--------------------VKGRF------------RPSAAS 345
           L   G  + A  ++++M                    V+GR             +P+  +
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT 459

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG 404
           Y  ++  LC+  ++D   + L +M  + C PN  T+N L +  C  G + EA  +++ + 
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
               +     Y  ++  + +   + +A +LL+ +   G +PD  TYSS+I  L  E  +E
Sbjct: 520 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+++F ++++   +P    +N +LL LCK   TD +++ F  M+  G MPNE TY  L+
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           EG+A++D L+ + ++L+EL  R V++++ +E
Sbjct: 640 EGLANEDFLKETRDLLRELCSRGVLNKNLLE 670



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 32/318 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           +T  +  +++DAF  L  M S G  PD +  T +L  LC+A + + A ++++ MV     
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++   +  LC+KG +  A  L+E+M ++G   N VTYN+LV G C+ G ++ +L+ 
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447

Query: 191 --------------------------------LDRLIQKGLVPNAFTYSFLLEAAYKERG 218
                                           L  ++QK   PN  T++ L+    ++  
Sbjct: 448 FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           +  A++L++ ++  G  PNL++YN LL G+ K+  +EEA+     L S G  P++V+Y+ 
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++  L  E R EEA ++   +      P  V YN ++ +L     TD A+     MV   
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627

Query: 339 FRPSAASYNPIIARLCSE 356
             P+  +Y  +I  L +E
Sbjct: 628 CMPNELTYITLIEGLANE 645



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 3/129 (2%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I +LCR+G+T  A ++L    + G   D + Y++L+ G C  G ++ A  +   M    
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 140

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             PD   +  ++ GLC   R   +L +   M+ +G  P+  TYT+L+E +        + 
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 538 EVLKELQLR 546
           EVL E++ +
Sbjct: 201 EVLDEMRAK 209



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 65/130 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D    +A   L  +VS G  PD+V  ++++  L + +++++AIK+  ++   G+ 
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P A  Y  ++  LCK+ N   A+     M   G   N +TY +L+ GL     L ++   
Sbjct: 595 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 654

Query: 191 LDRLIQKGLV 200
           L  L  +G++
Sbjct: 655 LRELCSRGVL 664


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 264/494 (53%), Gaps = 14/494 (2%)

Query: 54  PKDSVYTKPNRKPGNNNDTR--HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA 111
           P+    + PN  P N    R   RD  L +A   ++R  S+G  PDV   T L+ +LC+ 
Sbjct: 35  PEAPSASSPN--PANARLRRLIARD-DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRR 91

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
            +   A +V+     SG   D  +Y  LV   C+ G +  A +L+  M       +  TY
Sbjct: 92  GRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTY 148

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
             ++RGLC  G + ++L  LD ++ +G  P+  TY+ LLEA  K  G   AM++LD++ A
Sbjct: 149 TPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 208

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KG  PN+V+YNV++ G+C+EGR ++A  F   L S GF+P+ VSY  +L+ LC   RWE+
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
             EL AEM   +  P  VT+++L+      G  + A++VL++M       +    N +I 
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSS 410
            +C +G+VD   + L+ M    C P+  +Y   L  LC   + ++A  +++ +  K N  
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK-NCP 387

Query: 411 PQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           P E  +   I  LC+KG   QA  L+ +M+++G   +  TY++L+ G C++G ++ ALE+
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M     KP+   +  LL GLC + R D + E+   M++K   PN  T+ +LV     
Sbjct: 448 FYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504

Query: 530 QDELELSAEVLKEL 543
           +  ++ + E+++++
Sbjct: 505 KGLMDEAIELVEQM 518



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 269/511 (52%), Gaps = 33/511 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A   L+ M+ +G +P VV  T LL  +CK+    +A++V++ M + G  P+  +Y 
Sbjct: 160 RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYN 219

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++G V  A + + ++  YG+  +TV+Y ++++GLC         +    +++K
Sbjct: 220 VIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +PN  T+  L+    +   V  A+++L+ +   G   N    N+++  +CK+GR ++A
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +F  ++ S G  P+ +SY  +L+ LC   RWE+A ELL EM   +  P  VT+N  I  
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 318 LAYHGKTDHALKVLDEM--------------------VKGRF------------RPSAAS 345
           L   G  + A  ++++M                    V+GR             +P+  +
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT 459

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG 404
           Y  ++  LC+  ++D   + L +M  + C PN  T+N L +  C  G + EA  +++ + 
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
               +     Y  ++  +     + +A +LL+ +   G +PD  TYSS+I  L  E  +E
Sbjct: 520 EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+++F ++++   +P    +N +LL LCK   TD +++ F  M+  G MPNE TY  L+
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           EG+A++D L+ + ++L+EL  R V++++ +E
Sbjct: 640 EGLANEDFLKETRDLLRELCSRGVLNKNLLE 670



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 32/318 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           +T  +  +++DAF  L  M S G  PD +  T +L  LC+A + + A ++++ MV     
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++   +  LC+KG +  A  L+E+M ++G   N VTYN+LV G C+ G ++ +L+ 
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447

Query: 191 --------------------------------LDRLIQKGLVPNAFTYSFLLEAAYKERG 218
                                           L  ++QK   PN  T++ L+    ++  
Sbjct: 448 FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           +  A++L++ ++  G  PNL++YN LL G+  +  +EEA+     L S G  P++V+Y+ 
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSS 567

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++  L  E R EEA ++   +      P  V YN ++ +L     TD A+     MV   
Sbjct: 568 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627

Query: 339 FRPSAASYNPIIARLCSE 356
             P+  +Y  +I  L +E
Sbjct: 628 CMPNELTYITLIEGLANE 645



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 3/129 (2%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I +LCR+G+T  A ++L    + G   D + Y++L+ G C  G ++ A  +   M    
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 140

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             PD   +  ++ GLC   R   +L +   M+ +G  P+  TYT+L+E +        + 
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 538 EVLKELQLR 546
           EVL E++ +
Sbjct: 201 EVLDEMRAK 209



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 63/125 (50%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D    +A   L  +VS G  PD+V  ++++  L + +++++AIK+  ++   G+ P A  
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  ++  LCK+ N   A+     M   G   N +TY +L+ GL     L ++   L  L 
Sbjct: 600 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 659

Query: 196 QKGLV 200
            +G++
Sbjct: 660 SRGVL 664


>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g04760, chloroplastic-like [Glycine max]
          Length = 531

 Score =  275 bits (702), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 149/413 (36%), Positives = 237/413 (57%), Gaps = 5/413 (1%)

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           ++ +A Q++++M++ G+  + VTYN L+  LC  G L+ +L+F ++L+++   P   TY+
Sbjct: 104 SIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYT 163

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+EA   + G+  A+KLLD++     +P++  YN ++  +C+EG  + A      + SK
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSK 222

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G+  +V++YNILLRSL  +G+WE   EL+++M        +VTY++LI SL   GK +  
Sbjct: 223 GYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEG 282

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
           + +L +M K    P    Y+P+IA LC EG+VDL ++ LD M    C P+   YN  LA 
Sbjct: 283 VGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 342

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC   +  EA +I + LG    S     Y  V ++L   G   +A  ++ EM      PD
Sbjct: 343 LCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDPD 401

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFV--VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
              Y+SLI  LC +G+++EA+E+ V   ME  + KP V ++N +LLGLC+  R   + EV
Sbjct: 402 VIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEV 461

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              M++KG +PNETTYT L+EGI     L  + ++   L     +SE + ERL
Sbjct: 462 LAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMDAISEHSFERL 514



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 205/403 (50%), Gaps = 13/403 (3%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+  L+RM +KG  PD+V    L+  LC    +  A++    ++     P   +YT L+ 
Sbjct: 108 AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIE 167

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
               +G +  A++L+++M +     +   YNS++  +C  G ++++ + +  +  KG   
Sbjct: 168 ATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKGYAL 226

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ LL +   +    A  +L+ D++AKG + N+V+Y+VL++ LC++G+ EE +   
Sbjct: 227 DVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLL 286

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +D+  KG EP+   Y+ L+  LC EGR + A E+L  M      P IV YN ++  L   
Sbjct: 287 KDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ 346

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG----KVDLVVKCLDQMFHRRCKPN 377
            + D AL + +++ +    P+A+SYN + + L S G     + ++++ LD +      P+
Sbjct: 347 KRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXV-----DPD 401

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQL 434
              YN L + LC  G V EA  ++  +  + +        Y  V+  LCR G+   A ++
Sbjct: 402 VIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEV 461

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           L  M   G  P+  TY+ LI G+   G + +A ++   +   D
Sbjct: 462 LAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMD 504


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 251/460 (54%), Gaps = 9/460 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++R  S+G  PDV   T L+ +LC+  +   A +V+     SG   D  +Y  LV   C+
Sbjct: 97  VDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCR 156

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +L+  M       +  TY  ++RGLC  G + ++L  LD ++ +G  P+  T
Sbjct: 157 YGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVT 213

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ LLEA  K  G   AM++LD++ AKG  PN+V+YNV++ G+C+EGR ++A  F   L 
Sbjct: 214 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 273

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S GF+P+ VSY  +L+ LC   RWE+  EL AEM   +  P  VT+++L+      G  +
Sbjct: 274 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVE 333

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A++VL++M       +    N +I  +C +G+VD   + L+ M    C P+  +Y   L
Sbjct: 334 RAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 393

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
             LC   + ++A  +++ +  K N  P E  +   I  LC+KG   QA  L+ +M+++G 
Sbjct: 394 KGLCRAERWEDAKELLKEMVRK-NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 452

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             +  TY++L+ G C++G ++ ALE+F  M     KP+   +  LL GLC + R D + E
Sbjct: 453 EVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAE 509

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +   M++K   PN  T+ +LV     +  ++ + E+++++
Sbjct: 510 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 270/511 (52%), Gaps = 33/511 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A   L+ M+ +G +P VV  T LL  +CK+    +A++V++ M + G  P+  +Y 
Sbjct: 191 RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYN 250

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++G V  A + + ++  YG+  +TV+Y ++++GLC         +    +++K
Sbjct: 251 VIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 310

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +PN  T+  L+    +   V  A+++L+ +   G   N    N+++  +CK+GR ++A
Sbjct: 311 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 370

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +F  ++ S G  P+ +SY  +L+ LC   RWE+A ELL EM   +  P  VT+N  I  
Sbjct: 371 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 430

Query: 318 LAYHGKTDHALKVLDEM--------------------VKGRF------------RPSAAS 345
           L   G  + A  ++++M                    V+GR             +P+  +
Sbjct: 431 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT 490

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG 404
           Y  ++  LC+  ++D   + L +M  + C PN  T+N L +  C  G + EA  +++ + 
Sbjct: 491 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
               +     Y  ++  + +   + +A +LL+ +   G +PD  TYSS+I  L  E  +E
Sbjct: 551 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 610

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+++F ++++   +P    +N +LL LCK   TD +++ F  M+  G MPNE TY  L+
Sbjct: 611 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 670

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           EG+A++D L+ + ++L+EL  R V++++ +E
Sbjct: 671 EGLANEDFLKETRDLLRELCSRGVLNKNLLE 701



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 181/425 (42%), Gaps = 106/425 (24%)

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL-- 279
           A +L+D   ++G  P++     L+  LC+ GRT +A R  R     G   +V +YN L  
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 280 ------------------------------LRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
                                         +R LC  GR  EA  LL +M      P++V
Sbjct: 153 GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD--------- 360
           TY +L+ ++        A++VLDEM      P+  +YN II  +C EG+VD         
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272

Query: 361 -------------LVVKCL-------------DQMFHRRCKPNEGTYNGLA-MLCGVGKV 393
                         V+K L              +M  + C PNE T++ L    C  G V
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           + A  +++ +     ++       VI ++C++G+   AFQ L  M  YG +PD+ +Y+++
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTV 392

Query: 454 IRG-----------------------------------LCMEGLIEEALEIFVVMEEYDY 478
           ++G                                   LC +GLIE+A  +   M E+  
Sbjct: 393 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 452

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           + ++  +NAL+ G C   R D +LE+F  M  K   PN  TYT L+ G+ + + L+ +AE
Sbjct: 453 EVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAE 509

Query: 539 VLKEL 543
           +L E+
Sbjct: 510 LLAEM 514



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 32/318 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           +T  +  +++DAF  L  M S G  PD +  T +L  LC+A + + A ++++ MV     
Sbjct: 359 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 418

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++   +  LC+KG +  A  L+E+M ++G   N VTYN+LV G C+ G ++ +L+ 
Sbjct: 419 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 478

Query: 191 --------------------------------LDRLIQKGLVPNAFTYSFLLEAAYKERG 218
                                           L  ++QK   PN  T++ L+    ++  
Sbjct: 479 FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 538

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           +  A++L++ ++  G  PNL++YN LL G+ K+  +EEA+     L S G  P++V+Y+ 
Sbjct: 539 MDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSS 598

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++  L  E R EEA ++   +      P  V YN ++ +L     TD A+     MV   
Sbjct: 599 IIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 658

Query: 339 FRPSAASYNPIIARLCSE 356
             P+  +Y  +I  L +E
Sbjct: 659 CMPNELTYITLIEGLANE 676



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 3/129 (2%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I +LCR+G+T  A ++L    + G   D + Y++L+ G C  G ++ A  +   M    
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 171

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             PD   +  ++ GLC   R   +L +   M+ +G  P+  TYT+L+E +        + 
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231

Query: 538 EVLKELQLR 546
           EVL E++ +
Sbjct: 232 EVLDEMRAK 240



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 65/130 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D    +A   L  +VS G  PD+V  ++++  L + +++++AIK+  ++   G+ 
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 625

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P A  Y  ++  LCK+ N   A+     M   G   N +TY +L+ GL     L ++   
Sbjct: 626 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 685

Query: 191 LDRLIQKGLV 200
           L  L  +G++
Sbjct: 686 LRELCSRGVL 695


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/346 (41%), Positives = 214/346 (61%), Gaps = 1/346 (0%)

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
           A  K  G   AMKLLD++  KG  P++V+YNV++ G+C+EGR ++AI F ++LPS G EP
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N VSYNI+L+ LC   RWE+A EL+ EM      P +VT+N+LI  L   G  + AL+VL
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGV 390
           +++ K    P++ SYNP++   C + K+D  +  LD M  R C P+  +YN  L  LC  
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G+V  A  ++  L +K  +     Y  VI  L + GKT +A +LL EM   G  PD  TY
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 240

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S++  GLC E  IE+A+  F  +++   +P+   +NA++LGLCK R T  ++++F  MI 
Sbjct: 241 STIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIG 300

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
            G MPNE+TYTIL+EG+A++  ++ + ++L EL  R VV +S + +
Sbjct: 301 NGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINK 346



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 190/362 (52%), Gaps = 34/362 (9%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           CK +  K+A+K+++ M   G  PD  +Y  +VN +C++G V  A++ ++ +  YG   NT
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           V+YN +++GLC       + + +  + QKG  PN  T++ L+    ++  V  A+++L+ 
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           I   G  PN +SYN LL   CK+ + ++A+ F   + S+G  P++VSYN LL +LC  G 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            + A ELL ++     +P +++YN +I  L   GKT  AL++L+EMV    +P   +Y+ 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN 408
           I A LC E +++  ++                               AF  +Q +G + N
Sbjct: 243 IAAGLCREDRIEDAIR-------------------------------AFGKVQDMGIRPN 271

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +     Y  +I  LC++ +T+ A  L   M   G  P+  TY+ LI GL  EGLI+EA +
Sbjct: 272 TV---LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 328

Query: 469 IF 470
           + 
Sbjct: 329 LL 330



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 167/325 (51%), Gaps = 7/325 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M  KG  PD+V    ++  +C+  ++  AI+ ++ + S G  P+  SY  ++  LC 
Sbjct: 15  LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 74

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A +L+ +M   G P N VT+N L+  LC  G +  +L+ L+++ + G  PN+ +
Sbjct: 75  AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 134

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ LL A  K++ +  AM  LD ++++G  P++VSYN LLT LC+ G  + A+     L 
Sbjct: 135 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 194

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P ++SYN ++  L   G+ +EA ELL EM      P I+TY+ +   L    + +
Sbjct: 195 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 254

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN--- 382
            A++   ++     RP+   YN II  LC   +    +     M    C PNE TY    
Sbjct: 255 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 314

Query: 383 -GLAMLCGVGKVQEAFAIIQSLGNK 406
            GLA     G ++EA  ++  L ++
Sbjct: 315 EGLAY---EGLIKEARDLLDELCSR 336



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 162/298 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +++DA   L+ + S G +P+ V    +L  LC A + + A ++M  M   G  P+  
Sbjct: 39  QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 98

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ LC+KG V  A++++E++  YG   N+++YN L+   C    +++++ FLD +
Sbjct: 99  TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 158

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G  P+  +Y+ LL A  +   V  A++LL  +  KG  P L+SYN ++ GL K G+T
Sbjct: 159 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 218

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+    ++ SKG +P++++Y+ +   LC E R E+A     ++      P  V YN +
Sbjct: 219 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 278

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I  L    +T  A+ +   M+     P+ ++Y  +I  L  EG +      LD++  R
Sbjct: 279 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 336



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 101/194 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A   L+ MVS+G  PD+V    LL  LC++ ++  A++++  +   G  P   
Sbjct: 144 KQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 203

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +++ L K G    A++L+ +M   G   + +TY+++  GLC    +  +++   ++
Sbjct: 204 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 263

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ PN   Y+ ++    K R  H+A+ L   +I  G  PN  +Y +L+ GL  EG  
Sbjct: 264 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 323

Query: 255 EEAIRFFRDLPSKG 268
           +EA     +L S+G
Sbjct: 324 KEARDLLDELCSRG 337



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K  +A   L  MVSKG +PD++  + +   LC+ ++++ AI+    +   GI 
Sbjct: 210 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIR 269

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  ++  LCK+     A+ L   M   G   N  TY  L+ GL   G + ++   
Sbjct: 270 PNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL 329

Query: 191 LDRLIQKGLV 200
           LD L  +G+V
Sbjct: 330 LDELCSRGVV 339



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 50/102 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ DA     ++   G +P+ V    ++  LCK  +   AI +   M+ +G +P+ S
Sbjct: 249 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 308

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           +YT L+  L  +G +  A  L++++   G    ++     +R
Sbjct: 309 TYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIR 350


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 270/518 (52%), Gaps = 39/518 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  +L+DA   LE MV  G  P+V     +L+  CKAN+++ A+ ++E MV  G  PD  
Sbjct: 56  KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVV 115

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SYT ++N LCK   V  A ++++KM   G   N +TY +LV G C +G+L+ +++ + ++
Sbjct: 116 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 175

Query: 195 IQKGLVPNA------------------------------------FTYSFLLEAAYKERG 218
            ++G  PNA                                    FTYS ++++  K   
Sbjct: 176 TERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGK 235

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           V  A +L++ +++KG  PN+V+Y+ LL GLCK G+ +EA    + +   G  PN+V+YN 
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++   C  GR +EA  LL EM  G   P +VTY +L+ +    GK + A+ +++ MV+  
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 355

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAF 397
           + P+  +YN ++   C + +V+   + L  M  + C PN  +YN  +A LC   KV E  
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +++ + +         +  +I ++C+  +   A++L   + + G TP+  TY+SL+ GL
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 475

Query: 458 CMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           C     ++A  +   M  +    PD+  +N ++ GLCKS+R D + ++F  M+  G  P+
Sbjct: 476 CKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 535

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           + TY+I++  +     ++ +  VL EL L+      A+
Sbjct: 536 DVTYSIVISSLCKWRFMDEANNVL-ELMLKNGFDPGAI 572



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 249/472 (52%), Gaps = 3/472 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP-DA 133
           R   L+ A   + +M  +G++P+ +   N+++ LC   K+  A+++ + M  SG  P D 
Sbjct: 161 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV 220

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y+ +V+ L K G V  A +LVE M   G   N VTY+SL+ GLC  G L+++   L R
Sbjct: 221 FTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 280

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + + G  PN  TY+ +++   K   +  A  LL++++  G +PN+V+Y VLL   CK G+
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            E+AI     +  KG+ PN+ +YN LL   C +   E A +LL+ M      P +V+YN 
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L    K    + +L++M+     P   ++N II  +C   +VD+  +  + +    
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
           C PN  TYN L   LC   +  +A  +++ +  KQ  SP    Y  VI  LC+  +  +A
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           ++L  +M   G  PD  TYS +I  LC    ++EA  +  +M +  + P    +  L+ G
Sbjct: 521 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 580

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            CK+   D +LE+ Q+++ KG  P+  T++I ++ ++ +  L  + E+L+ +
Sbjct: 581 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 632



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 256/480 (53%), Gaps = 5/480 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA L    M SK   PD V    ++  L K++++  AI+++E MV +G  P+  SY 
Sbjct: 25  QCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYN 83

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK   V  A+ L+E+M   G P + V+Y +++ GLC L  ++++ + +D++IQ+
Sbjct: 84  TVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR 143

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  TY  L++   +   +  A++L+  +  +G +PN ++YN ++ GLC   + + A
Sbjct: 144 GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSA 203

Query: 258 IRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           ++ F+++   G   P+V +Y+ ++ SL   G+ ++A  L+  M     SP +VTY+ L+ 
Sbjct: 204 LQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLH 263

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   GK D A  +L  M +    P+  +YN II   C  G++D     L++M    C+P
Sbjct: 264 GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQP 323

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQL 434
           N  TY   L   C  GK ++A  +++ +  K    P  F Y  ++   C+K +  +A QL
Sbjct: 324 NVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK-GYVPNLFTYNSLLDMFCKKDEVERACQL 382

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L  M + G  P+  +Y+++I GLC    + E + +   M   +  PD+  FN ++  +CK
Sbjct: 383 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 442

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           + R D++ E+F ++ E G  PN  TY  LV G+      + +  +L+E+  +Q  S   +
Sbjct: 443 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 502



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 248/477 (51%), Gaps = 5/477 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  K++DA   +E MVSKG  P+VV  ++LL+ LCKA K+ +A  +++ M  SG  
Sbjct: 228 DSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 287

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  +++  CK G +  A  L+E+M D G   N VTY  L+   C  G    ++  
Sbjct: 288 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 347

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++ +++KG VPN FTY+ LL+   K+  V  A +LL  +I KG  PN+VSYN ++ GLCK
Sbjct: 348 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             +  E +     + S    P++V++N ++ ++C   R + A EL   +     +P +VT
Sbjct: 408 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 467

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           YN L+  L    + D A  +L EM + +   P   +YN +I  LC   +VD   K   QM
Sbjct: 468 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527

Query: 370 FHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGK 427
                 P++ TY+  ++ LC    + EA  +++ L  K    P    Y  +I   C+ G 
Sbjct: 528 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE-LMLKNGFDPGAITYGTLIDGFCKTGN 586

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A ++L  +   G  PD  T+S  I  L   G + +A E+   M      PD   +N 
Sbjct: 587 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 646

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL-ELSAEVLKEL 543
           LL G C + RT+ ++++F++M + G  P+  TYT LV  +  +    +L AEV K +
Sbjct: 647 LLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSM 703



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 156/314 (49%), Gaps = 3/314 (0%)

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KG K +   +  +L GLC  G+  +A+  FR++ SK   P+ V+YN ++  L    R ++
Sbjct: 4   KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDD 62

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  LL EM     +P + +YN ++       + ++AL +L++MV     P   SY  +I 
Sbjct: 63  AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVIN 122

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC   +VD   + +D+M  R C+PN  TY  L    C VG +  A  +++ +  +    
Sbjct: 123 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 182

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT-PDSYTYSSLIRGLCMEGLIEEALEI 469
               Y  ++  LC   K   A QL  EM + G   PD +TYS+++  L   G +++A  +
Sbjct: 183 NAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRL 242

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              M      P+V  +++LL GLCK+ + D +  + Q M   G  PN  TY  +++G   
Sbjct: 243 VEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCK 302

Query: 530 QDELELSAEVLKEL 543
              ++ +  +L+E+
Sbjct: 303 LGRIDEAYHLLEEM 316


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 157/497 (31%), Positives = 262/497 (52%), Gaps = 45/497 (9%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDV  A  L+ DLC+  +   A +V+E   + G    A +Y+ L +  C+ G +  A ++
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARVVE---ACGSAATAVTYSALADGYCRVGRLDEARRV 142

Query: 156 VEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           V+     G P   +   YN L+  LC+ G +  +L  LD ++ +G  P+  TY+ LLEAA
Sbjct: 143 VD-----GMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAA 197

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K RG   AM+L+D +  +G  P  V+YNV++ G+C+EG  + A      LPS G  PN 
Sbjct: 198 CKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNT 257

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V+YN +L+ L   GRWE+  EL+AEM   +  P+  T +++I SL   G    A+++L++
Sbjct: 258 VNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEK 317

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
           M K     +  +YN +++ LC +G VD  +  L  M    CKPN  TYN L   LC   +
Sbjct: 318 MSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAER 377

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            ++A  ++  +           +  +I  LC+KG T QA ++  +M + G  P+S TYSS
Sbjct: 378 WEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSS 437

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN---------------------------- 484
           +I GL   G +E++LE+   M    + P+++                             
Sbjct: 438 VIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGI 497

Query: 485 ------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
                 +N +LLGLC++ +TD ++++   M+  G MP+E+TY+IL++G+AH+  ++ + E
Sbjct: 498 SPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARE 557

Query: 539 VLKELQLRQVVSESAVE 555
           +L  L  R V+ ++ ++
Sbjct: 558 LLSTLSSRDVIVDNLIK 574



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 223/409 (54%), Gaps = 4/409 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA + L+ M+ +G  PDVV    LL   CK    ++A++++++M   G  P   +Y 
Sbjct: 167 QVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYN 226

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ +C++G+V YA +L+  +  YG   NTV YN++++GL   G      + +  +  +
Sbjct: 227 VIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSE 286

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+  T S ++ +  +E     A++LL+ +       N+V+YN +++GLC++G  + A
Sbjct: 287 NCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGA 346

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++ + G +PN+ +YNIL++ LC   RWE+A +L+A+M   D  P I+T+N +IG 
Sbjct: 347 LYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGF 406

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G T  A++V  +M +    P++ +Y+ +I  L   GK++  ++ L++M  +   P 
Sbjct: 407 LCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNP- 465

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           E  Y+ LA  L    K+ EA  ++  L +   S     Y  ++  LCR GKT QA  +L 
Sbjct: 466 EINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILS 525

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            M   G  PD  TYS LI+GL  EG ++EA E+   +   D    VDN 
Sbjct: 526 NMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVI--VDNL 572



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           + + KL +A   + ++   G  P  V    +L  LC+  K  +AI ++  MVS G +PD 
Sbjct: 477 NEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDE 536

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKM 159
           S+Y+ L+  L  +G +  A +L+  +
Sbjct: 537 STYSILIQGLAHEGYMKEARELLSTL 562


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/468 (32%), Positives = 265/468 (56%), Gaps = 7/468 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++ A   L+ M+ +   PDV+  T+L+   C+ N + +A K+ME M  SG+ PD  +Y 
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK+  +    +L+E+M + G   +T +YN++V  LC  G   ++ + L+++I+K
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+  TY+ L++   K   +  A +LL+D++ +   P +++Y  L+ G  +  R  +A
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA 321

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R   D+   G  P++V+YN LL  LC  G+ EEA+ELL  M   D +P +VTY+IL+  
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   GK D A  +L+ M++   +P+  ++N +I   C  GKVD   K L+ M    C P+
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ L    C   ++Q+AFAI+    +K +      Y  ++  LC  GK  +A +++ 
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAILGISPDKAS------YSSMLEGLCSTGKVEEAQEVMD 495

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            MTK G  P S  Y+ +I GLC     +EAL++  VM E   +P++  ++ L+ GLCK++
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           R + ++ V  +M+EKG +P+  TYT L++G    ++++ + +  K ++
Sbjct: 556 RVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR 603



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 242/480 (50%), Gaps = 30/480 (6%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L++ LC+  ++ +A ++++ M+     PDA+ Y  L+  LCK G +  A  +++ M +  
Sbjct: 98  LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              + +TY SL+ G C    L+++ + ++++ + GL P+   Y+ LL    K+  +    
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           KLL++++  G +P+  SYN ++  LC+ G+ EEA +    +  K   P+VV+YN L+   
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C   + +EA  LL +M G   +PT++TY  LIG  +   +   A +V+++M K    P  
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDL 337

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
            +YN ++  LC  GK++   + L+ M  + C P+  TY+ L   LC +GKV +A  +++ 
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM 397

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI-------- 454
           +  +        +  +I   C+ GK  +  ++L  M +   TPD  TYS+LI        
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457

Query: 455 ---------------------RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
                                 GLC  G +EEA E+  +M +    P   ++  ++ GLC
Sbjct: 458 MQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
              R D +L++ Q+M E+G  PN  TY+IL+ G+     +E +  VL  +  +  V + A
Sbjct: 518 DVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVA 577



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 241/490 (49%), Gaps = 42/490 (8%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           + L++A   +E+M   G  PD V    LL  LCK N++++  K++E MV +G  PD  SY
Sbjct: 176 NALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL----- 191
             +V CLC+ G    A +++EKM +     + VTYNSL+ G C +  ++++ + L     
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVG 295

Query: 192 --------------------DRL----------IQKGLVPNAFTYSFLLEAAYKERGVHA 221
                               DRL           + G+ P+  TY+ LL+   K   +  
Sbjct: 296 RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEE 355

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A +LL+ ++ K   P++V+Y++L+ GLCK G+ ++A      +  +G +PN+V++N ++ 
Sbjct: 356 AHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMID 415

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  G+ +E +++L  M     +P +VTY+ LI       +   A  +L         P
Sbjct: 416 GFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG------ISP 469

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAII 400
             ASY+ ++  LCS GKV+   + +D M  + C P    Y   +  LC V +  EA  ++
Sbjct: 470 DKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKML 529

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           Q +  +        Y  +I  LC+  +   A  +L  M + G  PD  TY+SLI G C  
Sbjct: 530 QVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKI 589

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
             ++ A + F  M +   +PD   +N L+ G C+S   + ++EV Q+M+EKG  P+  TY
Sbjct: 590 NKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649

Query: 521 TILVEGIAHQ 530
             L+  +  +
Sbjct: 650 FSLMRSLTTE 659



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 217/412 (52%), Gaps = 3/412 (0%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P  S+Y  L+    + GN    +++  +M    +  + +T+N++++  C +G+L+++L  
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
                +    P AFTY  L+    + + +  A +LLD++I K   P+   YN L+ GLCK
Sbjct: 82  FRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A    + +  +   P+V++Y  L+   C     +EA +L+ +M     +P  V 
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN L+  L    + +   K+L+EMV+    P   SYN ++A LC  GK +   K L++M 
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            ++C P+  TYN L    C V K+ EA  +++ +  ++ +     Y  +I    R  +  
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A++++ +M K G +PD  TY+ L+ GLC  G +EEA E+  VM E D  PDV  ++ L+
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
            GLCK  + D +  + +MM+E+G  PN  T+  +++G     +++   +VL+
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLE 431



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 232/455 (50%), Gaps = 13/455 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM--EMMVSSGIIPDASSYTYLVNCLCKK 146
           M+++   PDV+    +L   C+   + +A+     +M  S    P A +Y  L++ LC+ 
Sbjct: 50  MLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMWCS----PTAFTYCILIHGLCQC 105

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             +  A QL+++M       +   YN L+ GLC +G ++ +   L  ++++  VP+  TY
Sbjct: 106 QRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITY 165

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L+    +   +  A KL++ +   G  P+ V+YN LL GLCK+ + EE  +   ++  
Sbjct: 166 TSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVE 225

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G EP+  SYN ++  LC  G++EEA ++L +M      P +VTYN L+       K D 
Sbjct: 226 AGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDE 285

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LA 385
           A ++L++MV  R  P+  +Y  +I       ++    + ++ MF     P+  TYN  L 
Sbjct: 286 AERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLD 345

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  GK++EA  +++ +  K  +     Y  ++  LC+ GK   A  LL  M + G  P
Sbjct: 346 GLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQP 405

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  T++++I G C  G ++E  ++  +M+E    PDV  ++ L+ G CK+ R   +  + 
Sbjct: 406 NLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
                 G  P++ +Y+ ++EG+    ++E + EV+
Sbjct: 466 ------GISPDKASYSSMLEGLCSTGKVEEAQEVM 494



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 161/311 (51%), Gaps = 5/311 (1%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           KP+  +Y  L+TG  + G ++  +    ++ ++ F P+V+++N +L++ C  G  + A  
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA-- 78

Query: 295 LLAEMDGGDR-SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L+   G    SPT  TY ILI  L    + D A ++LDEM++    P AA YN +IA L
Sbjct: 79  -LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C  GK+D     L  M  R C P+  TY  L +  C    + EA  +++ +     +   
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDT 197

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  ++  LC++ +  +  +LL EM + G  PD+++Y++++  LC  G  EEA +I   
Sbjct: 198 VAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEK 257

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M E    PDV  +N+L+ G CK  + D +  + + M+ +   P   TYT L+ G +  D 
Sbjct: 258 MIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317

Query: 533 LELSAEVLKEL 543
           L  +  V++++
Sbjct: 318 LADAYRVMEDM 328



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 38/206 (18%)

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFA 398
           +PS ++Y  +I      G   +V++  ++M  RR  P+  T+N  L   C +G +  A +
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
                                     +GK +              +P ++TY  LI GLC
Sbjct: 81  HF------------------------RGKMW-------------CSPTAFTYCILIHGLC 103

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
               I+EA ++   M + D  PD   +N L+ GLCK  + D +  V +MM+E+  +P+  
Sbjct: 104 QCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVI 163

Query: 519 TYTILVEGIAHQDELELSAEVLKELQ 544
           TYT L+ G    + L+ + +++++++
Sbjct: 164 TYTSLIVGCCQTNALDEARKLMEKMK 189



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 2/137 (1%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +IT   R G +    ++  EM    F+PD  T++++++  C  G ++ AL  F    
Sbjct: 27  YGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF--RG 84

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +    P    +  L+ GLC+ +R D + ++   MI+K   P+   Y  L+ G+    +++
Sbjct: 85  KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKID 144

Query: 535 LSAEVLKELQLRQVVSE 551
            +  VLK +  R  V +
Sbjct: 145 AARNVLKMMLERSCVPD 161



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P + TY +LI G    G  +  LEI   M    + PDV   N +L   C+    D +L  
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 505 FQMMIEKGQM---PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           F     +G+M   P   TY IL+ G+     ++ + ++L E+  +    ++AV
Sbjct: 82  F-----RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAV 129


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 245/472 (51%), Gaps = 11/472 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL++A    +  V +G  PDVV    L+   CKA+K+ +A ++++ MVS  ++PD  +Y 
Sbjct: 135 KLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYN 194

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM-LGNLNQSLQFLDRLIQ 196
            LVN LCK G V  A  L+    D G+  N +TY++L+ GLC  L  L  + Q L++++ 
Sbjct: 195 SLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVL 251

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G  P+  +Y+ L+    +E+GV  A+KL   ++ +G +P + +YN+L+ GL KE R  E
Sbjct: 252 NGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNE 311

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F  L   G EP+ ++Y + +  LC  GR E+A  +L +MD     P +V++N +I 
Sbjct: 312 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 371

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L    + D A  +L  M      P+A S+N +I   C  GK    +    +M  R  KP
Sbjct: 372 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431

Query: 377 NEGTYNGLA-MLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              TYN L   LC     G+++EA  +  ++  K        Y  +I  L + GK   A 
Sbjct: 432 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 491

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +LL  M   G  P+ YTY+SLI GLC    ++EALE+FV M E    PD   +  ++  L
Sbjct: 492 RLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISAL 551

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           CK    D +L +F   +E G +P    Y  L++G+     ++   E LK LQ
Sbjct: 552 CKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVD---EALKLLQ 600



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 151/464 (32%), Positives = 247/464 (53%), Gaps = 12/464 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA    ERM+  G+ PDVV    LL+  CK  K+ +A+K+ +  V  G +PD  +Y 
Sbjct: 100 RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYN 159

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK   +  A +++++M       + VTYNSLV GLC  G ++++      ++ K
Sbjct: 160 ALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDK 216

Query: 198 GLVPNAFTYSFLLEAAYKE-RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           G  PN  TYS L+    +E R + +A +LL+ ++  G KP++VSYN L+ GL +E    E
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSE 276

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++ F  +  +G+EP V +YNIL+  L  E R  EA EL + +      P  +TY + I 
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 336

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G+ + AL +L +M +    P   S+N +I  LC E +VD     L  M  + C P
Sbjct: 337 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 396

Query: 377 NEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR---KGKTYQ 430
           N  ++N   ++CG    GK ++A    + +  +        Y  ++  LC+   +G+  +
Sbjct: 397 NAISFN--TLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 454

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  L   M + G  PD  TYS+LI GL   G +++A  +   ME     P+V  +N+L+ 
Sbjct: 455 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 514

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           GLC   + D +LE+F  M+EKG +P+  TY  ++  +  Q+ ++
Sbjct: 515 GLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVD 558



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 256/480 (53%), Gaps = 9/480 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K+  A   +E+++ KG   D+      +  LC+A+++  A  V + M   G  P+  
Sbjct: 28  KSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRI 86

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LC  G +  A  L E+M   GY  + VTYN+L+ G C +G L+++L+  D  
Sbjct: 87  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGA 146

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G VP+  TY+ L+    K   +  A ++L  ++++   P++V+YN L+ GLCK GR 
Sbjct: 147 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRV 206

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCME-GRWEEANELLAEMDGGDRSPTIVTYNI 313
           +EA     D   KGF PNV++Y+ L+  LC E  R E A +LL +M      P IV+YN 
Sbjct: 207 DEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNA 263

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  LA       ALK+   +++  + P   +YN +I  L  E +V+   +    +    
Sbjct: 264 LIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG 323

Query: 374 CKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            +P+  TY   +  LC  G+V++A  +++ +  K        +  VI  LC++ +  +A 
Sbjct: 324 LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE 383

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            LL  M   G +P++ ++++LI G C  G  ++A+  F  M +   KP V  +N L+ GL
Sbjct: 384 VLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 443

Query: 493 CKSR---RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           CK+R   R   ++ +F  MIEKG++P+  TY+ L++G+    +L+ +  +L  ++ +  +
Sbjct: 444 CKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI 503



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 215/422 (50%), Gaps = 10/422 (2%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PDA +   L+  L K G +  A + VE++   G   +  T+N  + GLC    +  +   
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTV 72

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D + + G  PN  TY+ LL        +  A  L + +I  G  P++V+YN LL G CK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EA++ F     +GF P+VV+YN L+   C   + +EA  +L  M      P +VT
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE-GKVDLVVKCLDQM 369
           YN L+  L  +G+ D A  ++   V   F P+  +Y+ +I+ LC E  +++   + L++M
Sbjct: 193 YNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN--KQNSSPQ-EFYKYVITSLCRKG 426
               CKP+  +YN  A++ G+ + Q     ++  G+  +Q   P+   Y  +I  L ++ 
Sbjct: 250 VLNGCKPDIVSYN--ALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +AF+L   + K+G  PD+ TY+  I GLC  G +E+AL +   M+E    PDV + N
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           A++ GLCK +R D +  +   M  KG  PN  ++  L+ G     + + +    KE+  R
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 427

Query: 547 QV 548
            V
Sbjct: 428 GV 429



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 187/360 (51%), Gaps = 10/360 (2%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+A+T   LL +  K   +  A + ++ ++ KG   ++ ++N+ ++GLC+  R  +A   
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQTV 72

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +   GF PN ++YN LL  LC  GR  +A  L   M     SP +VTYN L+     
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK D ALK+ D  VK  F P   +YN +I   C   K+D   + L +M      P+  T
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ-AFQLLYEM 438
           YN L   LC  G+V EA  +I   G   N      Y  +I+ LCR+ +  + A QLL +M
Sbjct: 193 YNSLVNGLCKNGRVDEARMLIVDKGFSPNVIT---YSTLISGLCRELRRLESARQLLEKM 249

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  PD  +Y++LI GL  E  + EAL++F  +    Y+P+V  +N L+ GL K  R 
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR----QVVSESAV 554
           + + E+F  +++ G  P+  TYT+ ++G+     +E +  +LK++  +     VVS +AV
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 175/331 (52%), Gaps = 4/331 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  +++A      ++ +G++P+V     L+  L K +++ +A ++   +V  G+ PDA 
Sbjct: 270 REQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 329

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  ++ LCK G V  A+ +++ M++ G   + V++N+++ GLC    ++++   L  +
Sbjct: 330 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 389

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK---E 251
             KG  PNA +++ L+    +      AM    +++ +G KP +V+YN+L+ GLCK   E
Sbjct: 390 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 449

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR +EAI  F  +  KG  P+VV+Y+ L+  L   G+ ++A  LL  M+     P + TY
Sbjct: 450 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 509

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N LI  L    K D AL++   MV+    P   +Y  II+ LC +  VD  +   D    
Sbjct: 510 NSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLE 569

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
               P  G Y  L   LC V +V EA  ++Q
Sbjct: 570 AGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 6/168 (3%)

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           GK+++A   ++ L  K       F  Y I+ LCR  +   A  +   M K+GF P+  TY
Sbjct: 30  GKIEKAHRFVEQLLVKGLCDISTFNIY-ISGLCRASRIGDAQTVFDGMRKHGFWPNRITY 88

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++L+ GLC  G + +A  ++  M +  Y PDV  +N LL G CK  + D +L++F   ++
Sbjct: 89  NALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVK 148

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
           +G +P+  TY  L+ G    D+L+ +  +L+     ++VSES V  +V
Sbjct: 149 RGFVPDVVTYNALINGFCKADKLDEAQRILQ-----RMVSESLVPDVV 191


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 247/467 (52%), Gaps = 9/467 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A   +E   S+G  PDV   T L+ +LC+  +   A +V+    +SG   D  +Y  
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV   C+ G +  A +L+  M     P +  TY  ++RGLC  G +  +L  LD ++Q+G
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY+ LLEA  K  G   AM +LD++ AKG  PN+V+YNV++ G+C+EGR ++A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                L S GF+P++VSY  +L+ LC   RW++   L AEM      P  VT+++L+   
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  + A++VL +M +    P+    N +I  +C +G+VD     L+ M    C P+ 
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 351

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            +Y   L  LC  G+ + A  ++  +  K N  P E  +   I  LC+KG   QA +L+ 
Sbjct: 352 ISYTTVLRGLCRAGRWEHAKELLPEMVRK-NCPPNEVTFNTFICILCQKGLIEQAIKLIE 410

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M +YG +    TY++L+ G C++G ++ ALE+F        +P+   +  LL GLC + 
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF---NNLPCEPNTITYTTLLTGLCHAE 467

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R D + E+   MI+K    N  T+ +LV     +  +E + E++ ++
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 514



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 261/514 (50%), Gaps = 39/514 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M+ +G +P VV  T LL  +CK++   +A+ V++ M + G  P+  +Y 
Sbjct: 156 RVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYN 215

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++G V  A +++ ++  YG+  + V+Y ++++GLC     +        ++ K
Sbjct: 216 VIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK 275

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             VPN  T+  L+    +   V  A+++L  +   G  PN    N+++  +CK+GR ++A
Sbjct: 276 KCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA 335

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             F  ++   G  P+ +SY  +LR LC  GRWE A ELL EM   +  P  VT+N  I  
Sbjct: 336 YDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICI 395

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A+K+++ M +        +YN ++   C +G+VD  ++  + +    C+PN
Sbjct: 396 LCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPN 452

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC   ++  A  ++  +  K        +  +++  C+KG   +A +L+ 
Sbjct: 453 TITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVN 512

Query: 437 EMTKYGFTP-----------------------------------DSYTYSSLIRGLCMEG 461
           +M ++G TP                                   D+ TYSS++  L  E 
Sbjct: 513 QMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRED 572

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
             EEA+++   +++   +P V  +N +L  LCK   TD +++ F  M+  G MPNE+TY 
Sbjct: 573 RTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYI 632

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           IL+EG+AH+  L+ +  VL EL  + V+S+S +E
Sbjct: 633 ILIEGLAHEGLLKEARYVLSELYAKGVLSKSLLE 666



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 196/434 (45%), Gaps = 71/434 (16%)

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +R L    +L ++ + ++    +G  P+ +  + L+    +      A ++L    A G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP----------------------------- 265
             ++ +YN L+ G C+ GR + A R    +P                             
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLD 165

Query: 266 ---SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
               +G +P+VV+Y +LL ++C    + EA  +L EM     +P IVTYN++I  +   G
Sbjct: 166 DMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 225

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + D A ++L+ +    F+P   SY  ++  LC+  + D V     +M  ++C PNE T++
Sbjct: 226 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 285

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L    C  G V+ A  ++Q +     +        VI ++C++G+   A+  L  M  Y
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345

Query: 442 GFTPDSYTYSSLIRG-----------------------------------LCMEGLIEEA 466
           G  PD+ +Y++++RG                                   LC +GLIE+A
Sbjct: 346 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 405

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           +++  +M EY     +  +NAL+ G C   R D +LE+F  +  +   PN  TYT L+ G
Sbjct: 406 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTG 462

Query: 527 IAHQDELELSAEVL 540
           + H + L+ +AE+L
Sbjct: 463 LCHAERLDAAAELL 476



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 3/154 (1%)

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + EA  ++++  ++  +        +I +LCR+G+T  A ++L      G   D + Y++
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ G C  G ++ A  +   M      PD   +  ++ GLC   R   +L +   M+++G
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             P+  TYT+L+E +        +  VL E++ +
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK 205



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ +  +A   L  +   G +P V     +L+ LCK  +  +AI     MVS+G +
Sbjct: 566 DVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCM 625

Query: 131 PDASSYTYLVNCLCKKG 147
           P+ S+Y  L+  L  +G
Sbjct: 626 PNESTYIILIEGLAHEG 642


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/466 (33%), Positives = 251/466 (53%), Gaps = 8/466 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E M S    P +V    LL  L +  K+++A+ + + M+      D  S+  LV  LC+
Sbjct: 33  FEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS-HDVISFNILVTGLCR 91

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A++   KM+D   P N +TY+ L+ GLC    ++Q+++ L+ +  +G  P+  T
Sbjct: 92  AGKIETALEFFRKMDDRCSP-NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVIT 150

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++   KE  V AA ++L +++  G  PNLV+YN LL GLC+  R  +A+   RD+ 
Sbjct: 151 YTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 210

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G  PNVV+Y  L+  LC  GR ++A  +LA+M     +P ++ YN+LI  L    + D
Sbjct: 211 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 270

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            ++ +L   V G  +P   +Y+ +I  LC   ++D   + L  +  R C P+   Y+ L 
Sbjct: 271 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLI 330

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  GKV EAF + + +      +    Y  +I  LC+ G+  +A  LL  M + G  
Sbjct: 331 DGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTP 390

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD-LSLE 503
           P + TY+SLI+GLC    ++EA+E+   ME  +  P    +N L+ G+C+  R D  +L+
Sbjct: 391 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALD 450

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            FQ MI+ G +P+  TY+IL+EG+    +L      L+ L L Q+V
Sbjct: 451 YFQEMIDNGVIPDHITYSILLEGLKKSKDL----HELRHLVLDQMV 492



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 199/371 (53%), Gaps = 3/371 (0%)

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M D+G   N VTYNSL+ GLC     +++ +  + +      P+  TY+ LL+  ++   
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           +  AM L  +++ +    +++S+N+L+TGLC+ G+ E A+ FFR +  +   PNV++Y++
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+  LC   R  +A ELL  M     SP ++TY IL+  L    K   A +VL EM+   
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
             P+  +YN ++  LC   +V   +  +  M  R C PN  TY  L   LC VG+V++A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           A++  + +K  +     Y  +I  LC+  +  ++  LL      G  PD  TYSS+I GL
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C    ++EA  + + ++     PDV  ++ L+ GLCK+ + D + +++++M   G   + 
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358

Query: 518 TTYTILVEGIA 528
            TY+ L++G+ 
Sbjct: 359 VTYSTLIDGLC 369



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 195/377 (51%), Gaps = 4/377 (1%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L+  R +     P+V+  + L+  LCKAN++ +A++++E M + G  PD  +YT LV+ L
Sbjct: 99  LEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 158

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK+  V  A +++ +M D G   N VTYNSL+ GLC    ++ +L  +  +  +G  PN 
Sbjct: 159 CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNV 218

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY  L++   K   V  A  +L D+I KGG P+L+ YN+L+ GLCK  + +E+I   R 
Sbjct: 219 VTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRR 278

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
             S G +P+VV+Y+ ++  LC   R +EA  LL  +      P ++ Y+ LI  L   GK
Sbjct: 279 AVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK 338

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A  + + M          +Y+ +I  LC  G+VD     L +M      P+  TYN 
Sbjct: 339 VDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNS 398

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKT-YQAFQLLYEMTK 440
           L   LC +  + EA  +++ +  + N +P    Y  +I  +CR  +    A     EM  
Sbjct: 399 LIKGLCDLNHLDEAIELVEEM-ERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMID 457

Query: 441 YGFTPDSYTYSSLIRGL 457
            G  PD  TYS L+ GL
Sbjct: 458 NGVIPDHITYSILLEGL 474



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 157/286 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+  A+  L  M+  G  P++V   +LL+ LC+A ++  A+ +M  M   G  P+  
Sbjct: 160 KESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVV 219

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK G V  A  ++  M D G   + + YN L+ GLC    +++S+  L R 
Sbjct: 220 TYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 279

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ P+  TYS ++    +   +  A +LL  + ++G  P+++ Y+ L+ GLCK G+ 
Sbjct: 280 VSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 339

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   +  +   G + +VV+Y+ L+  LC  GR +EA+ LLA M      P+ +TYN L
Sbjct: 340 DEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSL 399

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           I  L      D A+++++EM +    PSA +YN +I  +C   +VD
Sbjct: 400 IKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVD 445



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 36/196 (18%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R ++L++A   L  + S+G  PDV+  + L+  LCKA K+ +A  + E+M   G   D  
Sbjct: 300 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVV 359

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++ LCK G V  A  L+ +M   G P +T+TYNSL++GLC L +L+++++ ++ +
Sbjct: 360 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419

Query: 195 ------------------------------------IQKGLVPNAFTYSFLLEAAYKERG 218
                                               I  G++P+  TYS LLE   K + 
Sbjct: 420 ERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKD 479

Query: 219 VHAAMKLLDDIIAKGG 234
           +H    L+ D + + G
Sbjct: 480 LHELRHLVLDQMVQLG 495


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/453 (33%), Positives = 242/453 (53%), Gaps = 9/453 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  PDV   T L+ +LC+  +   A +V+     SG   D  +Y  LV   C+ G++  A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            +L+  M       +  TY  L+R LC  G +  +L  LD ++++G  PN  TY+ LLEA
Sbjct: 131 RRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             +  G   AM +LD++ AKG  PN+V+YNV++ G+C+EGR ++A      LPS GF+P+
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            VSY  LL+ LC   RW++  EL AEM   +  P  VT+++LI      G  + A++VL+
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVG 391
           +M +     +    N +I  +C +G+VD   K L+ M    C P+  +Y   L  LC   
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367

Query: 392 KVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           +  +A  ++  +  + N  P E  +   I  LC+KG   QA  L+ +M+++G T    TY
Sbjct: 368 RWDDAKELLNEM-VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTY 426

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++L+ G C++G I+ ALE+F  M     KP+   +  LL GLC + R D + E+   M+ 
Sbjct: 427 NALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLR 483

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
               PN  T+ +LV     +  LE + E+++++
Sbjct: 484 GDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQM 516



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 268/514 (52%), Gaps = 39/514 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M+ +G +P+VV  T LL  +C+ +  ++A+ V++ M + G  P+  +Y 
Sbjct: 158 RVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYN 217

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC------------------ 179
            ++N +C++G V  A +L+ ++  YG+  +TV+Y +L++GLC                  
Sbjct: 218 VIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK 277

Query: 180 ----------ML-------GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                     ML       G + +++Q L+++ + G   N    + ++ +  K+  V  A
Sbjct: 278 NCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDA 337

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            KLL+D+ + G  P+ +SY  +L GLC+  R ++A     ++      PN V++N  +  
Sbjct: 338 FKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICI 397

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC +G  E+A  L+ +M     +  +VTYN L+      G  D AL++   M     +P+
Sbjct: 398 LCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPN 454

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQ 401
             +Y  ++  LC+  ++D   + + +M    C PN  T+N L +  C  G ++EA  +++
Sbjct: 455 TITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVE 514

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +     +     Y  ++  + +   +  A +LL+ +   G +PD  T+SS+I  L  E 
Sbjct: 515 QMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKED 574

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            IEEA+++F V+++   +P    +N +LLGLCK    D +++ F  M+  G MPNE+TY 
Sbjct: 575 RIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYI 634

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           IL+EG+AH+  L+ + ++L  L  R V++++  E
Sbjct: 635 ILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLTE 668



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 4/152 (2%)

Query: 396 AFAIIQSLGNKQNSSPQEFY-KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           A  +++  G+    +P  +    +I +LCR+G+T  A ++L      G   D + Y++L+
Sbjct: 59  AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 118

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G C  G ++ A  +   M      PD   +  L+  LC   R   +L +   M+ +G  
Sbjct: 119 AGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ 175

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           PN  TYT+L+E +      E +  VL E++ +
Sbjct: 176 PNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAK 207


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 247/471 (52%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  +L+DA   LE MV  G  P+V     +L+  CKAN+++ A+ ++E MV+ G  PD  
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVV 301

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SYT ++N LCK   V  A ++++KM   G   N +TY +LV G C +G+L+ +++ + ++
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G  PNA TY+ ++    +   +  A ++L  +I  G  P+ ++Y+ +++G CK G+ 
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA      +  +G  P+V   + L+ +LC     + A ELL    G D +P +V Y+IL
Sbjct: 422 REAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSIL 481

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L    +   A   LD MVK R  P   +YN ++  LC   +++      D+M     
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGV 541

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY+  +   C    +  AF +++ +   +       Y  +I  LC+ G   +AF 
Sbjct: 542 MPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFD 601

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  EM   G  P+  TY++LI GLC    +E+A E+  +M +    PD   +  L+ GLC
Sbjct: 602 VFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLC 661

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + R + +  V + M +KG +P+  TY  L+  +   + LEL  ++LKE++
Sbjct: 662 NASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 245/472 (51%), Gaps = 3/472 (0%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP-DA 133
            R   +  A+  L+ M   G   +V+    ++  LC A K+  A+++ + M  SG  P D 
Sbjct: 889  RAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDV 948

Query: 134  SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             +Y+ +V+ L K G V  A +LVE M   G   N VTY+SL+ GLC  G L+++   L R
Sbjct: 949  FTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 1008

Query: 194  LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            + + G  PN  TY+ +++   K   +  A  LL++++  G +PN+V+Y VLL   CK G+
Sbjct: 1009 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 1068

Query: 254  TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             E+AI     +  KG+ PN+ +YN LL   C +   E A +LL+ M      P +V+YN 
Sbjct: 1069 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 1128

Query: 314  LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
            +I  L    K    + +L++M+     P   ++N II  +C   +VD+  +  + +    
Sbjct: 1129 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 1188

Query: 374  CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
            C PN  TYN L   LC   +  +A  +++ +  KQ  SP    Y  VI  LC+  +  +A
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248

Query: 432  FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++L  +M   G  PD  TYS +I  LC    ++EA  +  +M +  + P    +  L+ G
Sbjct: 1249 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 1308

Query: 492  LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             CK+   D +LE+ Q+++ KG  P+  T++I ++ ++ +  L  + E+L+ +
Sbjct: 1309 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 253/466 (54%), Gaps = 6/466 (1%)

Query: 92   KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
            +G+  D      LL  L +  + K A++V    +     P+  ++T L++ LC+ G++G 
Sbjct: 838  EGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCS--PNMFTFTILIHGLCRAGDIGT 895

Query: 152  AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLL 210
            A +L+++M  +G P N + +N +++GLC    L+ +L+    + + G   P+ FTYS ++
Sbjct: 896  AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIV 955

Query: 211  EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
            ++  K   V  A +L++D+++KG  PN+V+Y+ LL GLCK G+ +EA    + +   G  
Sbjct: 956  DSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 1015

Query: 271  PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
            PN+V+YN ++   C  GR +EA  LL EM  G   P +VTY +L+ +    GK + A+ +
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 1075

Query: 331  LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCG 389
            ++ MV+  + P+  +YN ++   C + +V+   + L  M  + C PN  +YN  +A LC 
Sbjct: 1076 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 1135

Query: 390  VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
              KV E   +++ + +         +  +I ++C+  +   A++L   + + G TP+  T
Sbjct: 1136 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 1195

Query: 450  YSSLIRGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
            Y+SL+ GLC     ++A  +   M  +    PD+  +N ++ GLCKS+R D + ++F  M
Sbjct: 1196 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 1255

Query: 509  IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +  G  P++ TY+I++  +     ++ +  VL EL L+      A+
Sbjct: 1256 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVL-ELMLKNGFDPGAI 1300



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/476 (31%), Positives = 245/476 (51%), Gaps = 3/476 (0%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D+  +  K++DA   +E MVSKG  P+VV  ++LL+ LCKA K+ +A  +++ M  SG  
Sbjct: 956  DSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 1015

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  +Y  +++  CK G +  A  L+E+M D G   N VTY  L+   C  G    ++  
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 1075

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            ++ +++KG VPN FTY+ LL+   K+  V  A +LL  +I KG  PN+VSYN ++ GLCK
Sbjct: 1076 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 1135

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              +  E +     + S    P++V++N ++ ++C   R + A EL   +     +P +VT
Sbjct: 1136 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 1195

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            YN L+  L    + D A  +L EM + +   P   +YN +I  LC   +VD   K   QM
Sbjct: 1196 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 1255

Query: 370  FHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                  P++ TY+  ++ LC    + EA  +++ +           Y  +I   C+ G  
Sbjct: 1256 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 1315

Query: 429  YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             +A ++L  +   G  PD  T+S  I  L   G + +A E+   M      PD   +N L
Sbjct: 1316 DKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTL 1375

Query: 489  LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL-ELSAEVLKEL 543
            L G C +  T+ ++++F++M + G  P+  TYT LV  +  +    +L AEV K +
Sbjct: 1376 LKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSM 1431



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 258/518 (49%), Gaps = 15/518 (2%)

Query: 36  SLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRD--------HKLNDAFLQLE 87
           +L  GFIR        I P   ++ + NRK    +   H+          + +DA L   
Sbjct: 166 TLISGFIRA-----GKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFR 220

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
            M SK   PD V    ++  L K++++  AI+++E MV +G  P+  SY  +++  CK  
Sbjct: 221 EM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 279

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A+ L+E+M   G P + V+Y +++ GLC L  ++++ + +D++IQ+G  PN  TY 
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++   +   +  A++L+  +  +G +PN ++YN ++   C+    E A +  + +   
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT 399

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+ ++Y+ ++   C  G+  EA++LL +M      P +   + LI +L      D A
Sbjct: 400 GCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSA 459

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
            ++L   +     P   +Y+ +I  LC   ++      LD M   RC P+  TYN +   
Sbjct: 460 QELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDG 519

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC   ++ +AF +   +           Y  VI S C+      AF++L  M +    PD
Sbjct: 520 LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TYS+LI GLC  G +++A ++F  M      P++  +N L+ GLCK  + + + E+ +
Sbjct: 580 VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE 639

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +M ++   P+  TYT L+ G+ +   LE +  VL+E++
Sbjct: 640 IMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK 677



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 236/479 (49%), Gaps = 2/479 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+  A+   + M  KG K       ++L  LC A +   A+     M S    PD+ 
Sbjct: 173 RAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSV 231

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N L K   +  A++L+E+M D G+  N  +YN+++ G C    +  +L  L+++
Sbjct: 232 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 291

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G  P+  +Y+ ++    K   V  A +++D +I +G +PN+++Y  L+ G C+ G  
Sbjct: 292 VTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDL 351

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+   R +  +G+ PN ++YN ++   C     E A+++L  M      P  + Y+ +
Sbjct: 352 DGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTI 411

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK   A  +L++M++   RP  A  + +I  LC    +D   + L       C
Sbjct: 412 ISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDC 471

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+   Y+ L   LC   ++ EA + +  +   +       Y  V+  LC+  +   AF 
Sbjct: 472 APDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFL 531

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   M   G  PD  TYS +I   C +  ++ A ++   M+E    PDV  ++AL+ GLC
Sbjct: 532 LFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLC 591

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           K+   D + +VFQ M+  G  PN  TY  L++G+   +++E +AE+L+ ++ +    +S
Sbjct: 592 KAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDS 650



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 211/456 (46%), Gaps = 51/456 (11%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N L K      A  L     +  +  +TVTY++L+ G    G +  + +  D + +KG
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKG 191

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDII-----AKGGKPNLVSYNVLLTGLCKEGR 253
           L  +A  +  +L      RG+  A +  D ++     +K   P+ V+YN ++ GL K  R
Sbjct: 192 LKAHAGVHKSIL------RGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDR 245

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++AIR   ++   GF PNV SYN +L   C   R E A  LL +M      P +V+Y  
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L    + D A +V+D+M++   +P+  +Y  ++   C  G +D  V+ + +M  R 
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQ 430
            +PN  TYN +  + C    ++ A  ++Q +   Q   P +   Y  +I+  C+ GK  +
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMM--IQTGCPPDAINYSTIISGFCKAGKLRE 423

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV------------------- 471
           A  LL +M + G  PD    S+LI  LC    I+ A E+                     
Sbjct: 424 AHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIH 483

Query: 472 ----------------VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
                           VM +    PDV  +N+++ GLCKSRR + +  +F  M   G MP
Sbjct: 484 ALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMP 543

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +  TY+I++      + L+ + ++L+ ++  + V +
Sbjct: 544 DVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 224/494 (45%), Gaps = 58/494 (11%)

Query: 86   LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            L  M+ KG  P+VV    ++  LCKA K+ + + ++E M+S+  +PD  ++  +++ +CK
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 146  KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK-GLVPNAF 204
               V  A +L   +++ G   N VTYNSLV GLC     +Q+   L  + +K G  P+  
Sbjct: 1171 TYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230

Query: 205  TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            TY+ +++   K + V  A KL   +++ G  P+ V+Y+++++ LCK    +EA      +
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290

Query: 265  PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
               GF+P  ++Y  L+   C  G  ++A E+L  +      P +VT++I I  L+  G+ 
Sbjct: 1291 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 1350

Query: 325  DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
              A ++L+ M++    P   +YN ++   C     +  V   + M    C+P+  TY  L
Sbjct: 1351 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410

Query: 385  A-----------MLCGVGK--VQEAFAIIQSLGNK----------------------QNS 409
                        +L  V K  V   F +   L +K                      +  
Sbjct: 1411 VGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCG 1470

Query: 410  SPQE--------------FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
            SPQ+               +  ++       +  QAF L   M   G  PD+ T+ SL+ 
Sbjct: 1471 SPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLT 1530

Query: 456  GLCMEGLIEEALEIFV-VMEEYDYKPDVDNFNAL--LLGLCKSRRTDLSLEVFQMMIEKG 512
              C  GL++ A++ FV +  +Y  +P VD+F+ +  LLG     R  L  E   +M+   
Sbjct: 1531 MCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLG-----RLGLVNEAEDLMLGMP 1585

Query: 513  QMPNETTYTILVEG 526
              P+  T+  L+  
Sbjct: 1586 CKPSAATWNCLLSA 1599



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 235/492 (47%), Gaps = 34/492 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL +A   LE+M+ +G +PDV   + L+  LCKA  +  A +++ M +     PD  +Y+
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYS 479

Query: 138 YLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            L++ LCK   +  A   ++ M ++  YP + VTYNS+V GLC    +N +    DR+  
Sbjct: 480 ILIHALCKAKRLPEAESWLDVMVKNRCYP-DVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G++P+  TYS ++ +  K+  + +A K+L+ +      P++V+Y+ L+ GLCK G  ++
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F+++   G  PN+V+YN L+  LC   + E+A E+L  M     +P  +TY  LI 
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L    + + A +VL EM      P   +Y  ++  L     ++LV + L +M       
Sbjct: 659 GLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME----AT 714

Query: 377 NEGTYNG----LAMLCGVGKV------------QEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            EG +N     L      G V                 ++ S   +   SP+  ++Y +T
Sbjct: 715 EEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRP-HQYRVT 773

Query: 421 SLCRKGKTYQAF------QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI--EEALEIF-V 471
           ++  +G  +         +  +E  +      +   ++ + G  ++G+   + AL  F  
Sbjct: 774 AVATQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDW 833

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
              +  Y  D    N LL  L + +R   +L+V++  +     PN  T+TIL+ G+    
Sbjct: 834 ATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCS--PNMFTFTILIHGLCRAG 891

Query: 532 ELELSAEVLKEL 543
           ++  + E+LKE+
Sbjct: 892 DIGTAYELLKEM 903



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 178/386 (46%), Gaps = 3/386 (0%)

Query: 150 GYAMQLVEKMEDY-GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           G A+   E  E   GY       N L+  L      +Q+       I+     +  TYS 
Sbjct: 107 GAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYST 166

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    +   +  A +L D++  KG K +   +  +L GLC  G+  +A+  FR++ SK 
Sbjct: 167 LISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKT 225

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+ V+YN ++  L    R ++A  LL EM     +P + +YN ++       + ++AL
Sbjct: 226 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 285

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            +L++MV     P   SY  +I  LC   +VD   + +D+M  R C+PN  TY  L    
Sbjct: 286 WLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 345

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C VG +  A  +++ +  +        Y  ++   CR+    +A Q+L  M + G  PD+
Sbjct: 346 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDA 405

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             YS++I G C  G + EA ++   M     +PDV   + L+  LCK+   D + E+ +M
Sbjct: 406 INYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRM 465

Query: 508 MIEKGQMPNETTYTILVEGIAHQDEL 533
            I     P+   Y+IL+  +     L
Sbjct: 466 SIGMDCAPDVVAYSILIHALCKAKRL 491



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 19/295 (6%)

Query: 257 AIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           A+ FF    ++ G++  +   N LL  L    ++ +A++L      G      VTY+ LI
Sbjct: 109 ALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLI 168

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-- 373
                 GK   A ++ DEM +   +  A  +  I+  LC  G      +C D + H R  
Sbjct: 169 SGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAG------QCSDAVLHFREM 222

Query: 374 ---CKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKG 426
              C P+  TYN   M+ G+ K   + +A  +++ + +    +P  F Y  V+   C+  
Sbjct: 223 SKTCPPDSVTYN--TMINGLSKSDRLDDAIRLLEEMVD-NGFAPNVFSYNTVLHGFCKAN 279

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +   A  LL +M   G  PD  +Y+++I GLC    ++EA  +   M +   +P+V  + 
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
            L+ G C+    D ++E+ + M E+G  PN  TY  ++     ++++E + +VL+
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQ 394



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 81/157 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D+ L+ AF  LERM      PDVV  + L+  LCKA  + KA  V + M+  G  P+  
Sbjct: 557 KDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLV 616

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK   V  A +++E M       +++TY  L+ GLC    L ++ + L  +
Sbjct: 617 TYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREM 676

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
             KG +P+  TY  LL A  K   +    +LL ++ A
Sbjct: 677 KDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 150/466 (32%), Positives = 245/466 (52%), Gaps = 6/466 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++++A   LE M   G  PDV     ++Y  C+ N++ +  K+++ M+  G  
Sbjct: 253 DALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFT 312

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y YL++ LCK   +  A  L+ K+       N V +N+LV G    G LN++  F
Sbjct: 313 PNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAF 368

Query: 191 L-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           + D++I  G VP+ FT+S L+    K+    +A++L++D+ AKG KPNL +Y +L+ G C
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K+G+ EEA    R++ +KGF  N V YN L+ +LC  G+  EA ++  EM      P I 
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+N LI  L    + + AL +  +MV      ++ ++N +I      G++   +K ++ M
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM 548

Query: 370 FHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             R C  +E TYNGL   LC  G V++   + + +  K  +        +I   C  GK 
Sbjct: 549 LFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKV 608

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
           + A + + +M   GF+PD  TY+SLI GLC  G I+EAL +F  ++    +PD   +N L
Sbjct: 609 HNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTL 668

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +  LC+    D +  +    +E G +PN+ T+ ILV     Q   E
Sbjct: 669 ICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSE 714



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 238/466 (51%), Gaps = 6/466 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SKG  P+      ++  LC  N++  A  ++  M   G +P++  Y  L++ L K+  
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A++L+E+M   G P +  T+N+++ G C L  + +  + +DR+I KG  PN  TY +
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD-LPSK 267
           L+    K   +  A  LL  +      PN+V +N L+ G  + GR  EA  F  D + + 
Sbjct: 321 LMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINN 376

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G+ P+V +++ L+  LC +G +  A EL+ +MD     P + TY ILI      G+ + A
Sbjct: 377 GYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA 436

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
             +L EM+   F  +   YN +I+ LC  GK+   +    +M  + CKP+  T+N L   
Sbjct: 437 GLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFG 496

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC V ++++A A+ + +  +   +    +  +I +  R+G+  +A +L+ +M   G   D
Sbjct: 497 LCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLD 556

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ LI+ LC  G +E+ L +F  M      P +   N L+ G C + +   +LE  +
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMR 616

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            MI +G  P+  TY  L+ G+  +  ++ +  + ++LQ   +  +S
Sbjct: 617 DMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDS 662



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 225/484 (46%), Gaps = 56/484 (11%)

Query: 100 QATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM 159
           QAT LL D+       K +   E        P   SY  +++ L        A  +   M
Sbjct: 157 QATRLLLDM-------KGVYCCE--------PSFRSYNVVLDVLVVGNCPSVASNVFYDM 201

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
              G   N  T+  +++ LCM+  ++ +   L  + + G VPN+  Y  L++A  K   V
Sbjct: 202 LSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRV 261

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A+KLL+++   G  P++ ++N ++ G C+  R  E  +    +  KGF PN ++Y  L
Sbjct: 262 DEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYL 321

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK-VLDEMVKGR 338
           +  LC   R +EA  LL+++ G    P +V +N L+     +G+ + A   V D+M+   
Sbjct: 322 MHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNG 377

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
           + P   +++ ++  LC +G     ++ ++ M  + CKPN  TY  L    C  G+++EA 
Sbjct: 378 YVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAG 437

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            I++ +  K  S     Y  +I++LC+ GK ++A  +  EM+  G  PD +T++SLI GL
Sbjct: 438 LILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGL 497

Query: 458 C----------------MEGL-------------------IEEALEIFVVMEEYDYKPDV 482
           C                +EG+                   I+EAL++   M       D 
Sbjct: 498 CRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDE 557

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N L+  LCK+   +  L +F+ MI KG  P+  T  IL+ G     ++  + E +++
Sbjct: 558 ITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRD 617

Query: 543 LQLR 546
           +  R
Sbjct: 618 MIHR 621


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 247/459 (53%), Gaps = 3/459 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   +E M  KG  PDV   T ++  LC+A K+ +A ++   M+  G   +  +Y 
Sbjct: 25  KVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYN 84

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK  N+  A +L+E+M   GY  + +TYN+++ GLC +G ++++ QF D +  +
Sbjct: 85  ALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR 144

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLD--DIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           G  P+   Y+ LL+A YKE  V  A  L    D+  +   P+L++YN L+ G C+  +T+
Sbjct: 145 GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTD 204

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA++ F+D+ +KG+ P+ V+YN +L  L  +   +EA E+  +M     +P   TY+I++
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G     L++ +EM + RF P     N +I  LC   KVD   K L++M      
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAV 324

Query: 376 PNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  TYN  L  LC    V +A  +  ++ +   +     Y  V+  LC+  K + A  L
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 384

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M +    PD  T++ L+ GLC  G ++EA ++  VM E++  PD      L+ GLC+
Sbjct: 385 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCR 444

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            +RTD ++ +FQ M+EKG + +   + I++ G+  + +L
Sbjct: 445 DKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKL 483



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 138/440 (31%), Positives = 241/440 (54%), Gaps = 3/440 (0%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M   G  PD  +Y+ +++ LCK G V  A+++VE+M + G   +  TY  +V  LC  G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           ++++ +   ++I++G   N   Y+ L+    K+  +  A KLL+++ +KG +P+ ++YN 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           +L+GLC+ G+  EA +FF  +PS+G+ P+VV+YN LL +L  EG+  EA  L   MD  D
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 304 R--SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
           R  +P ++TYN LI       KTD A+K+  +++   + P   +YN I+  L  +  +D 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 362 VVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
             +   +M    C PN  TY+  L+  C VG +     + + +  K+ S        VI 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            LC+  K   A ++L EM+K G  PD  TY+ L+ GLC   L+++A E+F  M +    P
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D+ +++ +L GLCK+ +   +  +F  MIE+  +P+  T+ IL++G+    +L+ + ++L
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 541 KELQLRQVVSESAVERLVMQ 560
             +    V+ +      +M 
Sbjct: 421 DVMSEHNVLPDGVTCTTLMH 440



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 225/478 (47%), Gaps = 40/478 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  +  A+  LE M SKG++PD +    +L  LC+  K+ +A +  + M S G  PD  
Sbjct: 92  KDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV 151

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKME--DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           +Y  L++ L K+G V  A  L + M+  D     + +TYN+L+ G C +   +++++   
Sbjct: 152 AYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFK 211

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +I KG +P+  TY+ +L    ++  +  A ++   ++  G  PN  +Y+++L+G C+ G
Sbjct: 212 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVG 271

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
                +  + ++  K F P+V+  N ++  LC   + ++A+++L EM      P +VTYN
Sbjct: 272 NMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYN 331

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           IL+  L      D A ++   MV     P   SY+ ++  LC   KV       D+M  R
Sbjct: 332 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 391

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG--------------------NKQNSSP 411
           +  P+  T+N L   LC  GK+ EA  ++  +                     +K+    
Sbjct: 392 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEA 451

Query: 412 QEFYKY---------------VITSLCRKGKTYQAFQLLYEMTKYG--FTPDSYTYSSLI 454
              ++Y               V+  LCR+GK  QA      M K    F+PD  TY++L+
Sbjct: 452 VRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
             L   G +++A++ F  M      PD   +N L+ GL K  R   +  + Q M EKG
Sbjct: 512 NALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 190/377 (50%), Gaps = 3/377 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K ++A    + +++KG+ PD V   ++L  L + + M +A ++ + MV SG  P+ +
Sbjct: 199 RVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGA 258

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++  C+ GN+   ++L E+M +  +  + +  N+++  LC    ++ + + L+ +
Sbjct: 259 TYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM 318

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G VP+  TY+ LL+   K   V  A +L   ++  G  P++VSY+V+L GLCK  + 
Sbjct: 319 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 378

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A   F  +  +   P+VV++NIL+  LC  G+ +EA +LL  M   +  P  VT   L
Sbjct: 379 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTL 438

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-- 372
           +  L    +TD A+++   MV+         +N ++A LC EGK+   +     M     
Sbjct: 439 MHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDG 498

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+  TY  L   L   G+V +A    Q +     +     Y  ++  L ++G+  QA
Sbjct: 499 EFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQA 558

Query: 432 FQLLYEMTKYGFTPDSY 448
            +L   M + GF  D +
Sbjct: 559 DRLTQAMKEKGFLSDCF 575


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 246/457 (53%), Gaps = 1/457 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV  GH+PDV+    L+  LC +     A+ V + M  +G  P+  +Y  +++ LCK   
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRL 248

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  AM  + +M   G P + +TYNS+V GLC LG LN++ +   R+ Q G  P+  TY+ 
Sbjct: 249 VNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNI 308

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++++ YK+R V+ A   L +++ +G  P++V+Y  +L GLC  G+  EAIR F+ +  KG
Sbjct: 309 IIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG 368

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P+VV+YN ++ SLC +    +A E L+EM      P  VTY+ ++      G+ D A 
Sbjct: 369 CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEAT 428

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           ++  EMV     P+  +++ ++  LC EG V       + M  +  +PN  TYN L    
Sbjct: 429 QLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGY 488

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   K+ EA  + + +  K  +     Y  +I   C   +  +A  LL +M+    TP++
Sbjct: 489 CLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNT 548

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+++++GLC  G + +A E+F  M      P +  ++ LL GLCK    D +L++F+ 
Sbjct: 549 VTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKS 608

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           M EK   P+   YTIL+EG+    +LE++  +  +L 
Sbjct: 609 MKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLS 645



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 245/447 (54%), Gaps = 2/447 (0%)

Query: 99  VQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           V + N+L + LC+ N +  A+ V   M   GI PD  ++T L+N +C +G +  A++L  
Sbjct: 128 VYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYN 187

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           +M   G+  + ++YN+L+ GLC  GN N ++    ++ Q G  PN  TY+ ++++  K+R
Sbjct: 188 EMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR 247

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            V+ AM  L +++ +G  P+ ++YN ++ GLC  G+  EA R F+ +   G +P+VV+YN
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYN 307

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
           I++ SL  +    +A + L+EM      P +VTY  ++  L Y G+ + A+++  +M + 
Sbjct: 308 IIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEA 396
             +P   +YN II  LC +  V+  ++ L +M  R   PN  TY+  L   C +G++ EA
Sbjct: 368 GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEA 427

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             + + +  +        +  ++  LC++G   +A  +   MT+ G  P+ YTY++L+ G
Sbjct: 428 TQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            C+   + EA ++F +M      PD+ ++N L+ G C SRR D +  +   M  K   PN
Sbjct: 488 YCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPN 547

Query: 517 ETTYTILVEGIAHQDELELSAEVLKEL 543
             TY  +++G+ +   L  + E+ K++
Sbjct: 548 TVTYNTIMKGLCYVGRLLDAQELFKKM 574



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 255/538 (47%), Gaps = 9/538 (1%)

Query: 24  GFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAF 83
           G +  +P   SF     F      T  T +   S+  K      N+++T   D    DA 
Sbjct: 27  GIFPFLPYFPSFL----FFHRHHITTSTFTKNPSLPKKNGGFASNSSNTISVD----DAL 78

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
               RM     +P +V+    L  + K  +    + +   M   G+     S   L+NCL
Sbjct: 79  ASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCL 138

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           C+  +V +A+ +  KM   G   + +T+ +L+ G+C  G +  +++  + +++ G  P+ 
Sbjct: 139 CRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDV 198

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            +Y+ L+         + A+ +   +   G KPN+V+YN ++  LCK+    +A+ F  +
Sbjct: 199 ISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSE 258

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  +G  P+ ++YN ++  LC  G+  EA  L   M+     P +VTYNI+I SL     
Sbjct: 259 MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRL 318

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            + A   L EMV     P   +Y  I+  LC  G+++  ++   +M  + CKP+   YN 
Sbjct: 319 VNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNT 378

Query: 384 LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           +   LC    V +A   +  + ++        Y  ++   C  G+  +A QL  EM    
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             P++ T+S L+ GLC EG++ EA  +F  M E   +P++  +NAL+ G C   + + + 
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +VF++M+ KG  P+  +Y IL+ G  +   ++ +  +L ++ ++++   +     +M+
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMK 556



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 237/477 (49%), Gaps = 34/477 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  +NDA   L  MV +G  PD +   ++++ LC   ++ +A ++ + M  +G  
Sbjct: 241 DSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCK 300

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  +++ L K   V  A   + +M D G P + VTY +++ GLC LG LN++++ 
Sbjct: 301 PDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRL 360

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++ QKG  P+   Y+ ++++  K+R V+ AM+ L +++ +G  PN V+Y+ +L G C 
Sbjct: 361 FKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCN 420

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EA + F+++  +   PN ++++IL+  LC EG   EA  +   M      P I T
Sbjct: 421 LGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYT 480

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN L+       K + A KV + MV     P   SYN +I   C+  ++D     L QM 
Sbjct: 481 YNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMS 540

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            ++  PN  TYN                                   ++  LC  G+   
Sbjct: 541 VKKLTPNTVTYNT----------------------------------IMKGLCYVGRLLD 566

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L  +M   G  P   TYS L+ GLC  G ++EAL++F  M+E   +PD+  +  L+ 
Sbjct: 567 AQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIE 626

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           G+    + +++  +F  +   G  P   TY ++++G+  +   + + E+ ++ ++ +
Sbjct: 627 GMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMK 683



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 197/375 (52%), Gaps = 5/375 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+ ++D  +NDA   L  MV +G  PDVV  T +L+ LC   ++ +AI++ + M   G  
Sbjct: 311 DSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCK 370

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  +++ LCK   V  AM+ + +M D G P N VTY++++ G C LG L+++ Q 
Sbjct: 371 PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQL 430

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ + ++PN  T+S L++   +E  V  A  + + +  KG +PN+ +YN L+ G C 
Sbjct: 431 FKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCL 490

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             +  EA + F  +  KG  P++ SYNIL+   C   R ++A  LL +M     +P  VT
Sbjct: 491 RCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVT 550

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN ++  L Y G+   A ++  +M      P+  +Y+ ++  LC  G +D  +K    M 
Sbjct: 551 YNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMK 610

Query: 371 HRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
            ++ +P+   Y  L   M  G GK++ A  +   L       P   Y  +I  L ++G +
Sbjct: 611 EKKLEPDIILYTILIEGMFIG-GKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLS 669

Query: 429 YQAFQLL--YEMTKY 441
            +A++L   ++M K+
Sbjct: 670 DEAYELFRKWKMMKH 684


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 165/517 (31%), Positives = 266/517 (51%), Gaps = 43/517 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA L+L  + S    PD   A  L+ DLC+  +   A +V+    + G      +Y  L 
Sbjct: 88  DAALRL--VESSPRPPDAALANRLVRDLCRRGRPDDAERVVG---ACGPAATVVAYGALT 142

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +  C+ G +G A ++V  M       N  TYN L+  LC  G +  +L  LD ++ +G  
Sbjct: 143 DGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCA 199

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ LLEA  K RG   AM+L+D + A+G  PN V+YNVL+ G+C EG  ++A+  
Sbjct: 200 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 259

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            R+LPS G +P+ V+YN +L+ LC   RW +A+EL+ EM   +  P   T+N++I SL  
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 319

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G    A+++L++M K     +  +YN II  LC +  VD  +  L +M    CKP+  T
Sbjct: 320 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVT 379

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN L   LC   +  +A  ++ ++           +  +I  LC+KG    A ++  +M 
Sbjct: 380 YNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 439

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV----------DN----- 484
             G TP+S TYS++I GL     +++ALE+F  M    + PD           D+     
Sbjct: 440 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEE 499

Query: 485 -------------------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
                              +NA+LLGLC++ +T+ ++++   M+  G MP++ TY IL+E
Sbjct: 500 AIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIE 559

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           G+A++  L  + E+L +L  R V+  S ++   +  D
Sbjct: 560 GLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALLLD 596



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 213/401 (53%), Gaps = 2/401 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M+ +G  PDVV    LL   CK    ++A++++++M + G  P+  +Y 
Sbjct: 182 QVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYN 241

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ +C +G+V  A++L+  +  +G   +TV YN++++GLC       + + +  ++++
Sbjct: 242 VLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRE 301

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T++ ++ +  ++  +  A++LL+ +   G   N+V+YN ++ GLC++   + A
Sbjct: 302 NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGA 361

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     + S G +P++V+YN LL+ LC   +W +A EL+  M      P  VT+N LIG 
Sbjct: 362 MGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGF 421

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G    A++V  +M      P++ +Y+ II+ L    K+D  ++  ++M H+   P+
Sbjct: 422 LCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD 481

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           +  Y  LA  L     ++EA   ++ L +   S     Y  ++  LCR GKT  A  ++ 
Sbjct: 482 K-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMA 540

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            M   G  PD  TY  LI GL  EG + EA E+ + +   D
Sbjct: 541 YMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD 581



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 199/406 (49%), Gaps = 18/406 (4%)

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK-GLVP 201
           L  +G++  A++LVE       P +    N LVR LC  G  + +    +R++   G   
Sbjct: 81  LVHRGDLDAALRLVESSP---RPPDAALANRLVRDLCRRGRPDDA----ERVVGACGPAA 133

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG---KPNLVSYNVLLTGLCKEGRTEEAI 258
               Y  L +      G   A +L D     GG   +PN  +YN L+  LC+ G+  +A+
Sbjct: 134 TVVAYGALTD------GYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDAL 187

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
               D+  +G  P+VV+YNILL + C    + +A EL+  M     +P  VTYN+L+  +
Sbjct: 188 SVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGM 247

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  D AL++L  +     +PS  +YN ++  LCS  +     + + +M    C PNE
Sbjct: 248 CGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNE 307

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            T+N +   LC  G +Q+A  +++ +     ++    Y  +I  LC +     A  LL +
Sbjct: 308 ATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSK 367

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M  YG  PD  TY++L++GLC      +A E+   M +    PD   FN L+  LC+   
Sbjct: 368 MKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGL 427

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              ++EVF+ M +KG  PN  TY+ ++ G+A   +L+ + E+  E+
Sbjct: 428 MVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM 473



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D  + +A   + ++   G  P  V    +L  LC+  K + AI +M  MVSSG +PD  +
Sbjct: 494 DDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLT 553

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           Y  L+  L  +G +  A +L+ K+      +  V  NSL++   +L  L+Q++ 
Sbjct: 554 YVILIEGLAYEGYLNEARELLIKLC-----SRDVLVNSLIKSEALL--LDQNIH 600


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/467 (32%), Positives = 247/467 (52%), Gaps = 9/467 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A   +ER  S+G  PDV   T L+ +LC+  +   A +V+     SG   D  +Y  
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV   C+ G +  A +L+  M     P +  TY  L+RGLC  G +  +L  LD ++++ 
Sbjct: 111 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY+ LLEA  K  G   AMK+LD++ AKG  PN+V+YNV++ G+C+E R ++A 
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +    L S GF+P+ VSY  +L+ LC   RWE+   L  EM   +  P  VT+++L+   
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  + A++VLD M +     +    N +I  +C +G+VD   + L+ M    C P+ 
Sbjct: 288 CRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDT 347

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            +Y   L  LC  G+ ++A  ++  +  K N  P E  +   I  LC+KG   QA  L+ 
Sbjct: 348 ISYTTVLKGLCRAGRWEDAKELLNEMVRK-NCPPNEVTFNTFICILCQKGLIDQAILLIE 406

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M +YG +    TY++L+ G C++G ++ ALE+F        +P+   +  LL GLC + 
Sbjct: 407 QMPEYGCSVGIVTYNALVNGFCVQGRVDSALELF---NSLPCEPNTITYTTLLTGLCHAE 463

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R D + E+   M++     N  T+ +LV     +  +E + E+++++
Sbjct: 464 RLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQM 510



 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 263/516 (50%), Gaps = 43/516 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M+ +  +P VV  T LL  +CK++   +A+KV++ M + G  P+  +Y 
Sbjct: 152 RVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYN 211

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++  V  A Q++ ++  YG+  +TV+Y ++++GLC              +++ 
Sbjct: 212 VIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVEN 271

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             VPN  T+  L+    +   V  A+++LD +   G   N    N+++  +CK+GR ++A
Sbjct: 272 NCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDA 331

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             F  ++ S G  P+ +SY  +L+ LC  GRWE+A ELL EM   +  P  VT+N  I  
Sbjct: 332 FEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICI 391

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  D A+ ++++M +        +YN ++   C +G+VD  ++  + +    C+PN
Sbjct: 392 LCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPN 448

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF--YKYVITSLCRKGKTYQAFQL 434
             TY  L   LC   ++  A  ++  +   QN  P     +  +++  C+KG   +A +L
Sbjct: 449 TITYTTLLTGLCHAERLDAAAELLAEM--MQNDCPLNVVTFNVLVSFFCQKGFVEEAIEL 506

Query: 435 LYEMTKYGFTP-----------------------------------DSYTYSSLIRGLCM 459
           + +M ++G TP                                   D+ TYSS++  L  
Sbjct: 507 VQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSR 566

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           E  IEEA+++F  +++   +P    +N +L  LCK   TD +++ F  M+    MPNE+T
Sbjct: 567 EDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNEST 626

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           Y IL+EG+A +  L+ +  VL EL  R V+S+S +E
Sbjct: 627 YVILIEGLAREGLLKEARYVLSELCSRGVLSKSLIE 662



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I +LCR+G+T  A ++L      G   D + Y++L+ G C  G ++ A  +   M    
Sbjct: 76  LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP--- 132

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             PD   +  L+ GLC   R   +L +   M+ +   P+  TYT+L+E +        + 
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192

Query: 538 EVLKELQLR 546
           +VL E++ +
Sbjct: 193 KVLDEMRAK 201



 Score = 42.0 bits (97), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 37/77 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ ++ +A      +   G +P  V    +L  LCK  +  +AI     MVS+  +
Sbjct: 562 DVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCM 621

Query: 131 PDASSYTYLVNCLCKKG 147
           P+ S+Y  L+  L ++G
Sbjct: 622 PNESTYVILIEGLAREG 638


>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 246/477 (51%), Gaps = 34/477 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL +A   ++ M  +   P      NL+  L K    ++A +V+++MV SG IPD  +Y 
Sbjct: 54  KLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITYN 113

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV  LCKKG +  A++L+++M   G P + +TYN+++R +   G  +Q++ F    ++K
Sbjct: 114 MLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRK 173

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G      TY+ L+E   K  G   AM++L+D+  +G  P++V+YN L+   CK+G+ E+ 
Sbjct: 174 GCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDT 233

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                +L S G  PN V+YN LL SLC  G W+E +E+L  M+   + PT+VTYNILI  
Sbjct: 234 ALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILING 293

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +G  D A+   D+MV     P   +YN ++A LC EG VD  +  L  +   RC P 
Sbjct: 294 LCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPG 353

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN                                   VI  L +KG   +A +L  E
Sbjct: 354 LITYN----------------------------------IVIDGLAKKGCMEKAMELYGE 379

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + GF PD  T+ +L  GL    L+E+AL I   M + + +     F  ++ GLCK ++
Sbjct: 380 MIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKK 439

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            D++++V +MM+     PNE  Y+ +++G+     +E + ++ ++L   +V  E  +
Sbjct: 440 VDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKVFREETM 496



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 196/414 (47%), Gaps = 3/414 (0%)

Query: 150 GYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           G+   L    + YG     +  T N +++ LC  G L  + + +D + ++  +P   +  
Sbjct: 19  GFQTDLTSASDRYGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCI 78

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    K      A ++L  ++  GG P++++YN+L+ GLCK+G  + AI    ++   
Sbjct: 79  NLIRGLIKLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLS 138

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+ ++YN +LR +   G +++A     +         ++TY +LI  +  H  T  A
Sbjct: 139 GCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQA 198

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
           ++VL++M      P   +YN ++   C +GK +     +  +      PN  TYN L   
Sbjct: 199 MEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHS 258

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  G   E   I+  +           Y  +I  LC+ G   +A     +M  +   PD
Sbjct: 259 LCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPD 318

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY++L+  LC EG+++EAL +   + +    P +  +N ++ GL K    + ++E++ 
Sbjct: 319 IITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYG 378

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            MIE+G  P++ T+  L  G+   D +E +  +LKE+  R    +++  R V+ 
Sbjct: 379 EMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIH 432


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 158/517 (30%), Positives = 266/517 (51%), Gaps = 40/517 (7%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA L+L  + S    PDV  A  L+ DLC+  +   A +V+E   + G    A++Y  LV
Sbjct: 81  DAALRL--VGSSPRPPDVPLANRLVRDLCRRGRPADAARVVE---ACGPEATAATYGALV 135

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +  C+ G +  A ++V  M  +   ++   +N L+  LC  G +  +L  LD ++ +G  
Sbjct: 136 DGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCA 195

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ LL+AA K RG   A++L+D + A+G +PN V+YNV++  +C+EG  ++A   
Sbjct: 196 PDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQAREL 255

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              LPS+G +PN V+YN +L+  C   RW +A+E+L EM   +  P   T N++I +L  
Sbjct: 256 LNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCR 315

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G        L++M K     +  +YN +I+ +C +G VD  ++ L  M    CKP+  T
Sbjct: 316 KGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVT 375

Query: 381 YNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN  L  LC   + ++A  ++  +           +  +I+  C+KG   QAF++  +M 
Sbjct: 376 YNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMP 435

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-------------------------- 473
           + G  P+S TYS++I GL   G +E+ALE+   M                          
Sbjct: 436 EKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEE 495

Query: 474 --------EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
                   ++    P    +N +LLGLC++ +TD +++V   M+  G MP+E+TY IL+E
Sbjct: 496 VVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIE 555

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           G+ ++   + + E+L  L  R V+S S ++   +  D
Sbjct: 556 GLFYEGYSKEARELLSRLCSRDVLSNSLIKNEALLLD 592



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 206/393 (52%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA + L+ M+ +G  PDVV    LL   CK    ++A+++++ M + G  P+  +Y 
Sbjct: 178 RVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYN 237

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ +C++G+V  A +L+  +   G   NTV YN++++G C +     + + LD ++++
Sbjct: 238 VIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRE 297

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T + ++    ++  +      L+ +   G   N+V+YN +++G+C++G  + A
Sbjct: 298 NCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSA 357

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++ S G +P++V+YN +L+ LC   RWE+A EL+ +M   DR P   T+N +I  
Sbjct: 358 LELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISF 417

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A +V  +M +    P++ +Y+ II  L   GK++  ++ L++M ++    +
Sbjct: 418 WCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD 477

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
           +        L    K++E   ++  L +   S     Y  V+  LCR GKT  A  +L +
Sbjct: 478 KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLAD 537

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           M   G  PD  TY  LI GL  EG  +EA E+ 
Sbjct: 538 MVSCGCMPDESTYIILIEGLFYEGYSKEARELL 570



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 1/311 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+  ++ A   L  + S+G KP+ V    +L   C   +   A ++++ MV     
Sbjct: 241 DAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCP 300

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+ ++   ++N LC+KG +      +EKM  +G   N VTYN+++ G+C  GN++ +L+ 
Sbjct: 301 PNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALEL 360

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   G  P+  TY+ +L+          A +L+  +      P+  ++N +++  C+
Sbjct: 361 LSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQ 420

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +G   +A   F+ +P KG  PN  +Y+ ++  L   G+ E+A ELL EM     + T   
Sbjct: 421 KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFN-TDKM 479

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y +L  SL    K +  ++V+ ++      P    YN ++  LC  GK D  +  L  M 
Sbjct: 480 YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMV 539

Query: 371 HRRCKPNEGTY 381
              C P+E TY
Sbjct: 540 SCGCMPDESTY 550



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           +++ K+ +    + ++   G  P  V    +L  LC+  K   AI V+  MVS G +PD 
Sbjct: 488 NKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDE 547

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           S+Y  L+  L  +G    A +L+ ++      +  V  NSL++   +L  L+Q+++
Sbjct: 548 STYIILIEGLFYEGYSKEARELLSRL-----CSRDVLSNSLIKNEALL--LDQNIR 596


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 252/484 (52%), Gaps = 37/484 (7%)

Query: 69  NNDTRH---RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
           NN+  H   +   L +A   ++ M      P+   +TNL+  L +  ++++A +V++ MV
Sbjct: 25  NNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMV 84

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
            SG++PD  +Y  +V   CK+  +  A+ L+E M   G P + +TYN+++R L   G  +
Sbjct: 85  MSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFD 144

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           Q+++F    +++G +P    Y+ L+E  +K  G   A+++L+D+  +G  P+LV+YN L+
Sbjct: 145 QAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLV 204

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
               KEG+ E+A     ++ S G EPN ++YN LL SLC  G W+E +E+LA M      
Sbjct: 205 NFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHP 264

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           PT+VTYNILI  L   G  + A+    +MV     P   +YN ++  LC EG VD  ++ 
Sbjct: 265 PTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQV 324

Query: 366 LDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
              +    C P   TYN                                   VI  L R+
Sbjct: 325 FVLLSDSNCSPGLITYNT----------------------------------VIDGLTRR 350

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A +L  +M + G  PD  T+ SL+ G C    +E+A+EI   M + D++ +   +
Sbjct: 351 GYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAY 410

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
             ++ GLC+++R D++++V +MMI     P+E  Y+ L++ +A    +E + E+ ++L  
Sbjct: 411 RLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIE 470

Query: 546 RQVV 549
           R+V+
Sbjct: 471 RKVL 474



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 203/397 (51%), Gaps = 11/397 (2%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T N ++  LC  G+L ++ + +D + +   +PN+   + L+    +   +  A ++L  +
Sbjct: 24  TNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTM 83

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +  G  P++++YN+++ G CK  +   AI    D+   G  P+V++YN ++RSL   G++
Sbjct: 84  VMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKF 143

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           ++A E           P ++ Y ILI  +  H  T  AL+VL++M      P   +YN +
Sbjct: 144 DQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSL 203

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG---KVQEAFAIIQSLGN 405
           +     EGK +     +  +     +PN  TYN L   LC  G   +V E  AI+     
Sbjct: 204 VNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIM----- 258

Query: 406 KQNSSPQEF--YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
           K+ S P     Y  +I  LC+ G   +A     +M     +PD  TY++L+  LC EG++
Sbjct: 259 KKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMV 318

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +EAL++FV++ + +  P +  +N ++ GL +    D +L+++  MIEKG  P+  T+  L
Sbjct: 319 DEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSL 378

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           V G    D++E + E+L+E+  R     S+  RLV+ 
Sbjct: 379 VWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVIN 415


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/475 (30%), Positives = 246/475 (51%), Gaps = 2/475 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  +++A+  L+ M  +G +PD      L+  LCK  K+  A+KV E   +    PD  
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+  LCK G +  A +L EKM +     + VT+ +L+ GLC    L ++ Q L+ +
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +   PN  TYS L++   K   V  A ++   +I +G +PN+V+YN L+ G C     
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+    ++ + G  P++++YN L+  LC  GR  EAN L  +M     +P ++TY+ L
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG      + D A  + D+M+K    P   +++ ++   C+ G VD   + L++M    C
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY  L    C VG++ EA  +++ +  +        Y  +I + CR GK   A++
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYR 602

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGL 492
           LL EM   G  P+  TY SLI G C  G +EEA +I   +E + + K D+  +  ++ GL
Sbjct: 603 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGL 662

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           C++ R   +LE+ + + + G  P    Y  L+ G+    EL  + EVL+E+ L +
Sbjct: 663 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 717



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 246/476 (51%), Gaps = 5/476 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++++    L+     G  P+V     ++  LCK+  + KA +++E M  SG +PDA+
Sbjct: 36  RARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAA 95

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y ++++ LCK  N   A+     ME      N +T+  ++ GLC    L ++  +  ++
Sbjct: 96  IYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKANRLPEATTYFAKM 152

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG VPN +TY+ L+    K   VH A  LL ++   G  PN+V+Y+ ++ G C++ + 
Sbjct: 153 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKV 212

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A + FR +   G  PN+V+YN LL  LC  G  +EA ELL EM      P   +Y+ L
Sbjct: 213 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 272

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   GK D ALKV ++   G   P   +Y+ +IA LC  G++D   K  ++M    C
Sbjct: 273 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSC 332

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+  T+  L   LC   ++QEA  +++++ ++  +     Y  +I  LC+ G+   A +
Sbjct: 333 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 392

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M   G  P+  TY+SLI G CM   ++ AL +   M      PD+  +N L+ GLC
Sbjct: 393 VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 452

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           K+ R   +  +F  M  K   P+  TY+ L+ G    + ++++  +  ++ L+Q V
Sbjct: 453 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM-LKQAV 507



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 241/470 (51%), Gaps = 1/470 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + ++L +A     +M  KG  P+      L+   CK +K+ +A  +++ M  SG+ P+  
Sbjct: 138 KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV 197

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++  C++  V  A +L  +M + G   N VTYN+L+ GLC  G ++++ + LD +
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 257

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++GL P+ F+Y  L+    K   +  A+K+ +D       P++V+Y+ L+ GLCK GR 
Sbjct: 258 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRL 317

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA + F  +     EP+VV++  L+  LC   R +EA ++L  M+  + +P ++TY+ L
Sbjct: 318 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 377

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+   A +V   M+     P+  +YN +I   C    VD  +  +++M    C
Sbjct: 378 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 437

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN L   LC  G+  EA  +   +  K  +     Y  +I   C+  +   A  
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 497

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  +M K    PD  T+S+L+ G C  GL+++A  +   M   D  PDV  + +L+ G C
Sbjct: 498 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 557

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K  R   +  V + M ++G  PN  TYT L++      +  ++  +L+E+
Sbjct: 558 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEM 607



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 193/388 (49%), Gaps = 6/388 (1%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+  N  TYN L   L     ++++   L      G+ PN FTY+ +++   K   +  A
Sbjct: 19  GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            +LL+++   G  P+   YN ++  LCK   T +A+ +FR +     E NV+++ I++  
Sbjct: 79  CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC---EKNVITWTIMIDG 135

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC   R  EA    A+M      P   TYN+LI       K   A  +L EM +    P+
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQ 401
             +Y+ +I   C + KVD   K   QM    C PN  TYN L + LC  G + EA+ ++ 
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 402 SLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            +  ++   P +F Y  ++  LC+ GK   A ++  + +     PD   YS+LI GLC  
Sbjct: 256 EM-RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G ++EA ++F  M E   +PDV  F AL+ GLCK  R   + +V + M ++   PN  TY
Sbjct: 315 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQV 548
           + L++G+    ++  + EV K + +R +
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGI 402



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 2/225 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA   LE MV+    PDV   T+L+   CK  +M +A +V++ M   G  P+  +YT 
Sbjct: 527 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 586

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ-K 197
           L++  C+ G    A +L+E+M   G   N +TY SL+ G C  G+L ++ + L+RL + +
Sbjct: 587 LIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDE 646

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               + F Y  +++   +   + AA++LL+ I   G  P    Y  L+ GLC+     +A
Sbjct: 647 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 706

Query: 258 IRFFRDLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           +    ++  S+   PN  +Y  +++ L  EGR EEAN L  E+ G
Sbjct: 707 MEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 751



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 44/83 (53%)

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           +  +V  +N L   L ++RR D +  + +     G  PN  TY ++++G+    +L+ + 
Sbjct: 20  FDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKAC 79

Query: 538 EVLKELQLRQVVSESAVERLVMQ 560
           E+L+E++    V ++A+   V+ 
Sbjct: 80  ELLEEMRESGPVPDAAIYNFVIH 102


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 149/453 (32%), Positives = 240/453 (52%), Gaps = 9/453 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  PDV   T L+ +LC+  +   A +V+     SG   D  +Y  LV   C+ G++  A
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            +L+  M       +  TY  L+R LC  G +  +L  LD ++++G  PN  TY+ LLEA
Sbjct: 130 RRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K  G   AM +LD++ AKG  PN+V+YNV++ G+C+EGR ++A      L S G +P+
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            VSY  LL+ LC   RW++  EL AEM   +  P  VT+++LI      G  + A++VL 
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVG 391
           +M +     +    N +I  +C +G+VD   K L+ M    C P+  +Y   L  LC   
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 392 KVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           +  +A  +++ +  + N  P E  +   I  LC+KG   QA  L+ +M ++G T    TY
Sbjct: 367 RWNDAKELLKEMV-RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTY 425

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++L+ G C++G I+ ALE+F  M     KP+   +  LL GLC + R D + E+   M+ 
Sbjct: 426 NALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLH 482

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +   PN  T+ +LV     +  L+ + E+++++
Sbjct: 483 RDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQM 515



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 262/511 (51%), Gaps = 33/511 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M+ +G +P+VV  T LL  +CK +  ++A+ V++ M + G  P+  +Y 
Sbjct: 157 RVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYN 216

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++G V  A  L+ ++  YG   +TV+Y +L++GLC     +   +    +++K
Sbjct: 217 VIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK 276

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +PN  T+  L+    +   V  A+++L  +       N    N+++  +CK+GR ++A
Sbjct: 277 NCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDA 336

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +F  ++ S G  P+ +SY  +L+ LC   RW +A ELL EM   +  P  VT+N  I  
Sbjct: 337 FKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICI 396

Query: 318 LAYHGKTDHALKVLDEM--------------------VKGRF------------RPSAAS 345
           L   G  + A+ ++++M                    V+G              +P+  +
Sbjct: 397 LCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTIT 456

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
           Y  ++  LC+  ++D   + + +M HR C PN  T+N L    C  G + EA  +++ + 
Sbjct: 457 YTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMM 516

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
               +     Y  +   + +   +  A +LL+ +   G +PD  T+SS+I  L  E  +E
Sbjct: 517 EHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVE 576

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+++F + ++   +P    +N +LLGLCK    D +++    M+  G MPNE+TY IL+
Sbjct: 577 EAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILI 636

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           EG+A +  L+ + ++L  L  R VVS++ +E
Sbjct: 637 EGLAREGLLKEAQDLLSMLCSRGVVSKNLIE 667



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 37/293 (12%)

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+V     L+R+LC  GR  +A  +L   +G      +  YN L+     +G  D A
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
            +++  M      P A +Y P+I  LC  G+V   +  LD M  R C+PN  T       
Sbjct: 130 RRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVT------- 179

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
                                      Y  ++ ++C+     QA  +L EM   G TP+ 
Sbjct: 180 ---------------------------YTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNI 212

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ +I G+C EG +++A ++   +  Y  +PD  ++  LL GLC S+R D   E+F  
Sbjct: 213 VTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAE 272

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           M+EK  MPNE T+ +L+        +E + +VL+++   +  + + +  +V+ 
Sbjct: 273 MMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVIN 325



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D    DA   L  +VSKG  PDV+  ++++  L K +++++AI++  +    G+ 
Sbjct: 532 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMR 591

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P A  Y  ++  LCK+  +  A+  +  M   G   N  TY  L+ GL   G L ++   
Sbjct: 592 PKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDL 651

Query: 191 LDRLIQKGLV 200
           L  L  +G+V
Sbjct: 652 LSMLCSRGVV 661


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 246/475 (51%), Gaps = 2/475 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  +++A+  L+ M  +G +PD      L+  LCK  K+  A+KV E   +    PD  
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+  LCK G +  A +L EKM +     + VT+ +L+ GLC    L ++ Q L+ +
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +   PN  TYS L++   K   V  A ++   +I +G +PN+V+YN L+ G C     
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+    ++ + G  P++++YN L+  LC  GR  EAN L  +M     +P ++TY+ L
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG      + D A  + D+M+K    P   +++ ++   C+ G VD   + L++M    C
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY  L    C VG++ EA  +++ +  +        Y  +I + CR GK   A++
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGL 492
           LL EM   G  P+  TY SLI G C  G +EEA ++   +E + + K D+  +  ++ GL
Sbjct: 484 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGL 543

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           C++ R   +LE+ + + + G  P    Y  L+ G+    EL  + EVL+E+ L +
Sbjct: 544 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 598



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 243/474 (51%), Gaps = 1/474 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + ++L +A     +M  KG  P+      L+   CK +K+ +A  +++ M  SG+ 
Sbjct: 15  DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 74

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ +++  C++  V  A +L  +M + G   N VTYN+L+ GLC  G ++++ + 
Sbjct: 75  PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 134

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD + ++GL P+ F+Y  L+    K   +  A+K+ +D       P++V+Y+ L+ GLCK
Sbjct: 135 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 194

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR +EA + F  +     EP+VV++  L+  LC   R +EA ++L  M+  + +P ++T
Sbjct: 195 TGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 254

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI  L   G+   A +V   M+     P+  +YN +I   C    VD  +  +++M 
Sbjct: 255 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 314

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C P+  TYN L   LC  G+  EA  +   +  K  +     Y  +I   C+  +  
Sbjct: 315 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 374

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A  L  +M K    PD  T+S+L+ G C  GL+++A  +   M   D  PDV  + +L+
Sbjct: 375 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLV 434

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G CK  R   +  V + M ++G  PN  TYT L++      +  ++ ++L+E+
Sbjct: 435 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEM 488



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 142/281 (50%), Gaps = 3/281 (1%)

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           E NV+++ I++  LC   R  EA    A+M      P   TYN+LI       K   A  
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLC 388
           +L EM +    P+  +Y+ +I   C + KVD   K   QM    C PN  TYN L + LC
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
             G + EA+ ++  +  ++   P +F Y  ++  LC+ GK   A ++  + +     PD 
Sbjct: 124 RNGLMDEAYELLDEM-RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             YS+LI GLC  G ++EA ++F  M E   +PDV  F AL+ GLCK  R   + +V + 
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           M ++   PN  TY+ L++G+    ++  + EV K + +R +
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 283



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 2/225 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA   LE MV+    PDV   T+L+   CK  +M +A +V++ M   G  P+  +YT 
Sbjct: 408 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 467

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ-K 197
           L++  C+ G    A +L+E+M   G   N +TY SL+ G C  G+L ++ + L+RL + +
Sbjct: 468 LIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDE 527

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               + F Y  +++   +   + AA++LL+ I   G  P    Y  L+ GLC+     +A
Sbjct: 528 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 587

Query: 258 IRFFRDLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           +    ++  S+   PN  +Y  +++ L  EGR EEAN L  E+ G
Sbjct: 588 MEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 632


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 266/526 (50%), Gaps = 45/526 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++AF  ++ M  KG  P++V    L+  LCKA+K +KA +++E +VSSG +PD  +YT
Sbjct: 381 RIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYT 440

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V+ LCK+G +  A+++VE M   G   + +TY +L+ GLC  G ++++      ++ K
Sbjct: 441 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               +A  Y  L+    K      A K++D I    G P +  YN L+ G CKEGR +E 
Sbjct: 501 DCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEI 557

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F D+  +G  PN+ +YNI++  LC  G+ +EA   L  M      P +V+YNI+I  
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K   A +VLD+M++    P A +YN ++A+ C E + D  V  L  M      P+
Sbjct: 618 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 677

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
             TYN L + L    ++ +A+ ++   L N    S    Y  +I  LC++G   QA  L+
Sbjct: 678 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 737

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC-- 493
             MT +G   ++ TY+  I  LC EG ++EA  +   + E D   D  ++  +++GLC  
Sbjct: 738 DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL---LSEMDTLRDEVSYTTVIIGLCKA 794

Query: 494 ----------------------------------KSRRTDLSLEVFQMMIEKGQMPNETT 519
                                             K++R D +L +  +M+++G  P+  T
Sbjct: 795 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVIT 854

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
           Y +++  +   D+++ + E+  E+ +R +V+ S+V   V+ Y   G
Sbjct: 855 YNMVITCLCKLDKVDKAWELFDEMAVRGIVA-SSVSYTVLIYGLCG 899



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 263/556 (47%), Gaps = 45/556 (8%)

Query: 22  AYGFYSQIPNLHSFS-LNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLN 80
           +Y ++  I +L   + ++K F  +  +      P+ SVYT   R          +  +L 
Sbjct: 160 SYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTR-------AFCKTGRLK 212

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA L++ R +     PD +    +++  C+ N    A++ ++ M    + PD  +Y  L+
Sbjct: 213 DA-LEIFRNIPS---PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILI 268

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           + LCK      A +++ +M D G   +TVT+NS++ GLC  G   ++   L  + ++   
Sbjct: 269 DGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCR 328

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ L+    K++ V  A  L+D+ ++ G  P++V+Y++L  GLCK GR +EA   
Sbjct: 329 PSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFEL 388

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            +++  KG  PN+V+YN L+  LC   + E+A ELL  +      P +VTY I++  L  
Sbjct: 389 VKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCK 448

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN--- 377
            G+ D ALK+++ M+K    PS  +Y  ++  LC  G+VD       +M  + C  +   
Sbjct: 449 EGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALA 508

Query: 378 ------------------------EGT-----YNGLA-MLCGVGKVQEAFAIIQSLGNKQ 407
                                    GT     YN L    C  G++ E   + + +  + 
Sbjct: 509 YVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                + Y  V+  LC+ GK  +AF  L  M   G  PD  +Y+ +I GL      +EA 
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++   M +    PD   +N L+   CK  R D ++ + + MI+ G  P+  TY  L+ G+
Sbjct: 629 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688

Query: 528 AHQDELELSAEVLKEL 543
           +  + L  + E++ E+
Sbjct: 689 SQTNRLGDAYELMHEM 704



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 245/494 (49%), Gaps = 43/494 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ERM+  G+ PD      ++  LC+ N++ KA  +++     G  P+ S YT L    CK
Sbjct: 148 FERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCK 207

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A+++   +       + + YN+++ G C   + + +L+FL  + ++ + P+ FT
Sbjct: 208 TGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFT 263

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF---- 261
           Y+ L++   K      A ++L +++ +G  P+ V++N ++ GLCK G+ E A        
Sbjct: 264 YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 323

Query: 262 ---------------------------RDL----PSKGFEPNVVSYNILLRSLCMEGRWE 290
                                      +DL     S GF P+VV+Y+IL   LC  GR +
Sbjct: 324 ERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRID 383

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           EA EL+ EM G   +P +VTYN LI  L    KT+ A ++L+ +V   F P   +Y  I+
Sbjct: 384 EAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIV 443

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
             LC EG++D  +K ++ M  R C P+  TY  L   LC  G+V EA  I + + +K  +
Sbjct: 444 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 503

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           +    Y  ++   C+  +T +A +++  +     TP    Y++L+ G C EG ++E   +
Sbjct: 504 ADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNV 560

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M      P++  +N ++ GLCK  + D +    + M   G +P+  +Y I+++G+  
Sbjct: 561 FEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFK 620

Query: 530 QDELELSAEVLKEL 543
             + + + +VL ++
Sbjct: 621 ASKPKEARQVLDQM 634



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 227/486 (46%), Gaps = 37/486 (7%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           +G K         L  L +     +   + E M+ +G  PD+ +Y  ++  LC+   +  
Sbjct: 119 RGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDK 178

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A  +++K +  G+      Y  L R  C  G L  +L+    +      P+A  Y+ ++ 
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIH 234

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              ++     A++ L ++  +   P++ +YN+L+ GLCK  +T++A     ++  +G  P
Sbjct: 235 GHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP 294

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           + V++N ++  LC  G++E A+ LLA M   +  P+  TYN LI  L      D A  ++
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGV 390
           DE V   F P   +Y+ +   LC  G++D   + + +M  + C PN  TYN L   LC  
Sbjct: 355 DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
            K ++A+ +++SL +         Y  ++  LC++G+  +A +++  M K G TP   TY
Sbjct: 415 SKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITY 474

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPD----------------------------- 481
           ++L+ GLC  G ++EA  IF  M   D   D                             
Sbjct: 475 TALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG 534

Query: 482 ---VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
              +D +NAL+ G CK  R D    VF+ M  +G +PN  TY I+++G+    +++ +  
Sbjct: 535 TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP 594

Query: 539 VLKELQ 544
            L+ + 
Sbjct: 595 FLESMH 600



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 204/393 (51%), Gaps = 5/393 (1%)

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
           D G+  +T T N  ++ L   G+ ++     +R++  G  P+++TY  ++++  +   + 
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A  +LD    +G KP +  Y +L    CK GR ++A+  FR++PS    P+ ++YN ++
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAII 233

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
              C +   + A E L EM+    +P + TYNILI  L    KTD A ++L EMV     
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAI 399
           P   ++N I+  LC  GK +     L  M  R C+P+  TYN L + LC    V  A  +
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           +    +         Y  +   LC++G+  +AF+L+ EM+  G TP+  TY++LI GLC 
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCK 413

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
               E+A E+   +    + PDV  +  ++ GLCK  R D +L++ + M+++G  P+  T
Sbjct: 414 ASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 473

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           YT L+EG+     ++ +  + KE+  +   +++
Sbjct: 474 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 206/474 (43%), Gaps = 67/474 (14%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L+ A   +E M+ +G  P V+  T L+  LC+  ++ +A  + + MVS     DA 
Sbjct: 448 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADAL 507

Query: 135 SYTYLVNCLCKKGNVGYAMQLV--------------------------------EKMEDY 162
           +Y  LVN  CK      A ++V                                E M   
Sbjct: 508 AYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR 567

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   N  TYN ++ GLC  G ++++  FL+ +   G VP+  +Y+ +++  +K      A
Sbjct: 568 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 627

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            ++LD +I  G  P+ V+YN L+   CKE R ++A+   +++   G +P+ V+YN L+  
Sbjct: 628 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 687

Query: 283 LCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           L    R  +A EL+ EM   G       TYN +I  L   G    AL ++D M       
Sbjct: 688 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 747

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRR------------CKPNE----------- 378
           +  +YN  I RLC EG++D     L +M   R            CK  +           
Sbjct: 748 NTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREM 807

Query: 379 ----------GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
                      T+N L        ++ EA  ++  +  +  S     Y  VIT LC+  K
Sbjct: 808 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDK 867

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
             +A++L  EM   G    S +Y+ LI GLC +G  +EAL++   M   D + D
Sbjct: 868 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 168/342 (49%), Gaps = 34/342 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++AF  LE M S G  PDVV    ++  L KA+K K+A +V++ M+ +GI PDA +Y 
Sbjct: 588 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYN 647

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK+     A+ +++ M   G   + VTYN+L+ GL     L  + + +  +++ 
Sbjct: 648 TLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN 707

Query: 198 GLVPNAFT-YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           G V +A T Y+ +++   KE  +  A+ L+D +   G + N V+YN+ +  LCKEGR +E
Sbjct: 708 GCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDE 767

Query: 257 AIRFFRDLPS---------------------------------KGFEPNVVSYNILLRSL 283
           A     ++ +                                 KG      ++N+L+ + 
Sbjct: 768 ASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 827

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
               R +EA  LL  M     SP+++TYN++I  L    K D A ++ DEM       S+
Sbjct: 828 TKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASS 887

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            SY  +I  LC +G+    ++ L++M    C+ ++  +  +A
Sbjct: 888 VSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVA 929



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 143/291 (49%), Gaps = 7/291 (2%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + AI FF     +GF+ +  + N  L++L   G  +    +   M     +P   TY+++
Sbjct: 107 QTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLV 166

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL    + D A  +LD+     F+P  + Y  +    C  G++   +    ++F    
Sbjct: 167 IKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDAL----EIFRNIP 222

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            P+   YN +    C       A   ++ + N++  +P  F Y  +I  LC+  KT +A 
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEM-NERKVAPDVFTYNILIDGLCKASKTDKAS 281

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++L+EM   G TPD+ T++S++ GLC  G  E A  +  VM E + +P    +N L+ GL
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           CK +  D + ++    +  G +P+  TY+IL +G+  +  ++ + E++KE+
Sbjct: 342 CKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 392



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 4/145 (2%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  VI SLC+  +  +AF +L +    GF P+   Y+ L R  C  G +++ALEIF  + 
Sbjct: 163 YHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP 222

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
                PD   +NA++ G C+    D +LE  + M E+   P+  TY IL++G+    + +
Sbjct: 223 S----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTD 278

Query: 535 LSAEVLKELQLRQVVSESAVERLVM 559
            ++E+L E+  R V  ++     +M
Sbjct: 279 KASEMLHEMVDRGVTPDTVTFNSIM 303



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 50/89 (56%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +L++A   L  MV +G  P V+    ++  LCK +K+ KA ++ + M   GI+
Sbjct: 825 DAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIV 884

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKM 159
             + SYT L+  LC +G    A+Q++E+M
Sbjct: 885 ASSVSYTVLIYGLCGQGRGKEALQVLEEM 913


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 266/526 (50%), Gaps = 45/526 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++AF  ++ M   G  P++V    L+  LCKA+K +KA +++E +VSSG +PD  +YT
Sbjct: 130 RIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYT 189

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V+ LCK+G +  A+++VE M   G   + +TY +L+ GLC  G ++++      ++ K
Sbjct: 190 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 249

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               +A  Y  L+    K      A K++D I    G P +  YN L+ G CKEGR +E 
Sbjct: 250 DCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEI 306

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F D+  +G  PN+ +YNI++  LC  G+ +EA   L  M      P +V+YNI+I  
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K   A +VLD+M++    P A +YN ++A+ C E + D  V  L  M      P+
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
             TYN L + L    ++ +A+ ++   L N    S    Y  +I  LC++G   QA  L+
Sbjct: 427 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 486

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK- 494
             MT +G   ++ TY+  I  LC EG ++EA  +   + E D   D  ++  +++GLCK 
Sbjct: 487 DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL---LSEMDTLRDEVSYTTVIIGLCKA 543

Query: 495 -----------------------------------SRRTDLSLEVFQMMIEKGQMPNETT 519
                                              ++R D +L + ++M+++G  P+  T
Sbjct: 544 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVIT 603

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
           Y +++  +   D+++ + E+  E+ +R +V+ S+V   V+ Y   G
Sbjct: 604 YNMVITCLCKLDKVDKAWELFDEMAVRGIVA-SSVSYTVLIYGLCG 648



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 224/449 (49%), Gaps = 4/449 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDV     L+  LCKA+K  KA +++  MV  G+ PD  ++  +++ LCK G    A  L
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +  M +     +  TYN+L+ GLC   N++++   +D  +  G VP+  TYS L +   K
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  A +L+ ++   G  PNLV+YN L+ GLCK  +TE+A      L S GF P+VV+
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y I++  LC EGR ++A +++  M     +P+++TY  L+  L   G+ D A  +  EMV
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
                  A +Y  ++   C   +     K +D +   R  P    YN L    C  G++ 
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLD 304

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           E   + + +  +      + Y  V+  LC+ GK  +AF  L  M   G  PD  +Y+ +I
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GL      +EA ++   M +    PD   +N L+   CK  R D ++ + + MI+ G  
Sbjct: 365 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 424

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
           P+  TY  L+ G++  + L  + E++ E+
Sbjct: 425 PDNVTYNTLISGLSQTNRLGDAYELMHEM 453



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 235/456 (51%), Gaps = 7/456 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K + A   L  MV +G  PD V   +++  LCKA K ++A  ++ +M      P   +Y 
Sbjct: 25  KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYN 84

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK+ NV  A  LV++    G+  + VTY+ L  GLC  G ++++ + +  +   
Sbjct: 85  TLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGN 144

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  TY+ L++   K      A +LL+ +++ G  P++V+Y +++ GLCKEGR ++A
Sbjct: 145 GCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKA 204

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++    +  +G  P+V++Y  L+  LC  GR +EA+ +  EM   D +   + Y  L+  
Sbjct: 205 LKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNG 264

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                +T  A KV+D +   R  P    YN ++   C EG++D +    + M  R C PN
Sbjct: 265 YCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 321

Query: 378 EGTYNGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
             TYN + M  LC  GKV EAF  ++S+ +         Y  +I  L +  K  +A Q+L
Sbjct: 322 IKTYN-IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL 380

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +M + G  PD+ TY++L+   C E   ++A+ I   M +    PD   +N L+ GL ++
Sbjct: 381 DQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQT 440

Query: 496 RRTDLSLEVFQMMIEKGQMPNE-TTYTILVEGIAHQ 530
            R   + E+   M+  G + +  TTY  +++ +  +
Sbjct: 441 NRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 476



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 218/504 (43%), Gaps = 67/504 (13%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L+ A   +E M+ +G  P V+  T L+  LC+  ++ +A  + + MVS     DA 
Sbjct: 197 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADAL 256

Query: 135 SYTYLVNCLCKKGNVGYAMQLV--------------------------------EKMEDY 162
           +Y  LVN  CK      A ++V                                E M   
Sbjct: 257 AYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR 316

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   N  TYN ++ GLC  G ++++  FL+ +   G VP+  +Y+ +++  +K      A
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 376

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            ++LD +I  G  P+ V+YN L+   CKE R ++A+   +++   G +P+ V+YN L+  
Sbjct: 377 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 436

Query: 283 LCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           L    R  +A EL+ EM   G       TYN +I  L   G    AL ++D M       
Sbjct: 437 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 496

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRR------------CKPNE----------- 378
           +  +YN  I RLC EG++D     L +M   R            CK  +           
Sbjct: 497 NTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREM 556

Query: 379 ----------GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
                      T+N L        ++ EA  +++ +  +  S     Y  VIT LC+  K
Sbjct: 557 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDK 616

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A++L  EM   G    S +Y+ LI GLC +G  +EAL++   M   D + D      
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEK 511
           L L L    R + + E+ + M  K
Sbjct: 677 LYLALRGQGRGEEAAELLRRMTTK 700



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 189/384 (49%), Gaps = 39/384 (10%)

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++ + P+ FTY+ L++   K      A ++L +++ +G  P+ V++N ++ GLCK G+ E
Sbjct: 3   ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62

Query: 256 EAIRFFR-----------------------------------DLPSKGFEPNVVSYNILL 280
            A                                        +  S GF P+VV+Y+IL 
Sbjct: 63  RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC  GR +EA EL+ EM G   +P +VTYN LI  L    KT+ A ++L+ +V   F 
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
           P   +Y  I+  LC EG++D  +K ++ M  R C P+  TY  L   LC  G+V EA  I
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHI 242

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            + + +K  ++    Y  ++   C+  +T +A +++  +     TP    Y++L+ G C 
Sbjct: 243 FKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCK 299

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           EG ++E   +F  M      P++  +N ++ GLCK  + D +    + M   G +P+  +
Sbjct: 300 EGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVS 359

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
           Y I+++G+    + + + +VL ++
Sbjct: 360 YNIIIDGLFKASKPKEARQVLDQM 383



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 130/249 (52%), Gaps = 1/249 (0%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           +P + TYNILI  L    KTD A ++L EMV     P   ++N I+  LC  GK +    
Sbjct: 7   APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHS 66

Query: 365 CLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            L  M  R C+P+  TYN L + LC    V  A  ++    +         Y  +   LC
Sbjct: 67  LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC 126

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           ++G+  +AF+L+ EM+  G TP+  TY++LI GLC     E+A E+   +    + PDV 
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +  ++ GLCK  R D +L++ + M+++G  P+  TYT L+EG+     ++ +  + KE+
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 544 QLRQVVSES 552
             +   +++
Sbjct: 247 VSKDCTADA 255



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 1/202 (0%)

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           M + +  P   +YN +I  LC   K D   + L +M  R   P+  T+N +   LC  GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            + A +++  +  +        Y  +I+ LC++    +A  L+ E    GF PD  TYS 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L  GLC  G I+EA E+   M      P++  +N L+ GLCK+ +T+ + E+ + ++  G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 513 QMPNETTYTILVEGIAHQDELE 534
            +P+  TYTI+V+G+  +  L+
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLD 202



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 63/127 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +L++A   LE MV +G  P V+    ++  LCK +K+ KA ++ + M   GI+
Sbjct: 574 DAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIV 633

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
             + SYT L+  LC +G    A+Q++E+M       + +    L   L   G   ++ + 
Sbjct: 634 ASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAEL 693

Query: 191 LDRLIQK 197
           L R+  K
Sbjct: 694 LRRMTTK 700


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 261/524 (49%), Gaps = 54/524 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L+ A   L  M   G +P+VV   +L+  LCK N+  +A ++ E M S    P   
Sbjct: 91  KEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMV 150

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM--------EDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
           +Y  L++ L + G +  AM L ++M        +D   P N +TY+ L+ GLC    ++Q
Sbjct: 151 TYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP-NVITYSVLIDGLCKANRVSQ 209

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +++ L+ +  +G  P+  TY+ L++   KE  V AA ++L +++  G  PNLV+YN LL 
Sbjct: 210 AVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLH 269

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           GLC+  R  +A+   RD+  +G  PNVV+Y  L+  LC  GR ++A  +LA+M     +P
Sbjct: 270 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 329

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            ++ YN+LI  L    + D ++ +L   V G  +P   +Y+ +I  LC   ++D   + L
Sbjct: 330 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 389

Query: 367 DQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             +  R C P+   Y+ L   LC  GKV EAF + + +      +    Y  +I  LC+ 
Sbjct: 390 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKA 449

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G+  +A  LL  M + G  P + TY+SLI+GLC    ++EA+E+   ME  +  P    +
Sbjct: 450 GRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 509

Query: 486 NALLLGLCKSRRTDLS----------------------------------------LEVF 505
           N L+ G+C+  R D +                                        L+ F
Sbjct: 510 NILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYF 569

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           Q MI+ G +P+  TY+IL+EG+    +L      L+ L L Q+V
Sbjct: 570 QEMIDNGVIPDHITYSILLEGLKKSKDL----HELRHLVLDQMV 609



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 246/488 (50%), Gaps = 9/488 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++ A    + M SK   P+V   + L+  LCKA +   A++    M  SGI+ D  
Sbjct: 21  RGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTV 80

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++ L K+  +  A+ ++ +M D+G   N VTYNSL+ GLC     +++ +  + +
Sbjct: 81  IYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-------KPNLVSYNVLLTG 247
                 P+  TY+ LL+  ++   +  AM L  +++ +          PN+++Y+VL+ G
Sbjct: 141 KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDG 200

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           LCK  R  +A+     + ++G  P+V++Y IL+  LC E +   A E+L EM      P 
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 260

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           +VTYN L+  L    +   AL ++ +M      P+  +Y  +I  LC  G+V      L 
Sbjct: 261 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 320

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            M  +   P+   YN L   LC   +V E+ A+++   +         Y  VI  LCR  
Sbjct: 321 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 380

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A +LL  +   G  PD   YS+LI GLC  G ++EA +++ VM       DV  ++
Sbjct: 381 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYS 440

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            L+ GLCK+ R D +  +   M+  G  P+  TY  L++G+   + L+ + E+++E++ R
Sbjct: 441 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME-R 499

Query: 547 QVVSESAV 554
              + SAV
Sbjct: 500 SNCAPSAV 507



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 142/425 (33%), Positives = 221/425 (52%), Gaps = 9/425 (2%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+V+  + L+  LCKAN++ +A++++E M + G  PD  +YT LV+ LCK+  V  A ++
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + +M D G   N VTYNSL+ GLC    ++ +L  +  +  +G  PN  TY  L++   K
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              V  A  +L D+I KGG P+L+ YN+L+ GLCK  + +E+I   R   S G +P+VV+
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ ++  LC   R +EA  LL  +      P ++ Y+ LI  L   GK D A  + + M 
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
                    +Y+ +I  LC  G+VD     L +M      P+  TYN L   LC +  + 
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488

Query: 395 EAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE-----MTKYGFTPDSY 448
           EA  +++ +  + N +P    Y  +I  +CR  +   A  LL +     +   G   D+ 
Sbjct: 489 EAIELVEEM-ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTI 547

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT-DLSLEVFQM 507
            YSSLI GLC  G + EAL+ F  M +    PD   ++ LL GL KS+   +L   V   
Sbjct: 548 AYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQ 607

Query: 508 MIEKG 512
           M++ G
Sbjct: 608 MVQLG 612



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 223/442 (50%), Gaps = 8/442 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           +PDV     LL   C+  ++ +A +  + M S  ++P+    + L++ LCK      A++
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
               M+  G   +TV Y +L+ GL     L+Q+L  L  +   G  PN  TY+ L++   
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK------- 267
           K      A +L + + +    P++V+YN LL GL + G+ E A+  F+++  +       
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              PNV++Y++L+  LC   R  +A ELL  M     SP ++TY IL+  L    K   A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
            +VL EM+     P+  +YN ++  LC   +V   +  +  M  R C PN  TY  L   
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC VG+V++A A++  + +K  +     Y  +I  LC+  +  ++  LL      G  PD
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TYSS+I GLC    ++EA  + + ++     PDV  ++ L+ GLCK+ + D + ++++
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425

Query: 507 MMIEKGQMPNETTYTILVEGIA 528
           +M   G   +  TY+ L++G+ 
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLC 447



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 192/379 (50%), Gaps = 8/379 (2%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TY +L+RG C  G ++Q+ +  D +  K LVPN F  S L++   K +    A++    +
Sbjct: 11  TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAM 70

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
              G   + V Y  LL+GL KE R ++A+    ++   G EPNVV+YN L+  LC     
Sbjct: 71  QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEP 130

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-------KGRFRPS 342
           + A EL   M   + SP++VTYN L+  L   GK + A+ +  EM+         R  P+
Sbjct: 131 DRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPN 190

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
             +Y+ +I  LC   +V   V+ L+ M  R C P+  TY  L   LC   KV  A+ +++
Sbjct: 191 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR 250

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            + +         Y  ++  LCR  +   A  L+ +MT  G TP+  TY +LI GLC  G
Sbjct: 251 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG 310

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +++A  +   M +    PD+  +N L+ GLCK+ + D S+ + +  +  G  P+  TY+
Sbjct: 311 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 370

Query: 522 ILVEGIAHQDELELSAEVL 540
            ++ G+   + L+ +  +L
Sbjct: 371 SVIYGLCRSNRLDEACRLL 389



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 201/412 (48%), Gaps = 8/412 (1%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+   C+ G +  A +  ++M       N    + L+ GLC       +L+ 
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G+V +   Y+ LL   +KE+ +  A+ +L ++   G +PN+V+YN L+ GLCK
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM------DGGDR 304
               + A   F  + S    P++V+YN LL  L   G+ E A  L  EM      D  DR
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 305 -SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
            SP ++TY++LI  L    +   A+++L+ M      P   +Y  ++  LC E KV    
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           + L +M    C PN  TYN L   LC   +V +A A+++ +  +  +     Y  +I  L
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ G+   A  +L +M   G TPD   Y+ LI GLC    ++E++ +         KPDV
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             +++++ GLC+S R D +  +   +  +G  P+   Y+ L++G+    +++
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVD 418



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 174/349 (49%), Gaps = 8/349 (2%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ +TY+ LL    +   +  A +  D++ +K   PN+   ++L+ GLCK  R+ +A+R 
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           FR +   G   + V Y  LL  L  E R ++A  +L EM      P +VTYN LI  L  
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-------R 373
           + + D A ++ + M      PS  +YN ++  L   GK++  +    +M  R       R
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  TY+ L   LC   +V +A  +++S+  +  S     Y  ++  LC++ K   A+
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++L EM   G  P+  TY+SL+ GLC    + +AL +   M      P+V  +  L+ GL
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           CK  R   +  +   MI+KG  P+   Y +L+ G+   D+++ S  +L+
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR 355



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 57/100 (57%)

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD YTY++L+RG C  G I++A   F  M   +  P+V   + L+ GLCK++R+  +L  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F+ M   G + +   YT L+ G+  +  L+ +  +L E++
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMR 106


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 135/335 (40%), Positives = 208/335 (62%), Gaps = 1/335 (0%)

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           MKLLD++  KG  P++++YNV+L G+C+EGR ++A+ F  +LPS G EPN VSYNI+L+ 
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           L    RWE+A +L+ EM      P +VT+N+LI  L   G  + A++VL+++ K    P+
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQ 401
           + SYNP++   C + K+D  +  ++ M  R C P+  +YN L   LC  G+V  A  ++ 
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            L  K  S     Y  VI  L + GKT +A +LL EM   G  PD  TY+++  GLC E 
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRED 240

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            IEEA+  F  +++   +P V  +NA+LLGLCK R T  ++++F  MI  G MPNE+TYT
Sbjct: 241 KIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYT 300

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           ILVEG+A++  ++ + ++L +L  R VV++  +++
Sbjct: 301 ILVEGLAYEGLVKEARDLLGQLCSRGVVNKKFMKK 335



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 179/353 (50%), Gaps = 34/353 (9%)

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
           +K+++ M   G  PD  +Y  ++N +C++G V  AM+ +E +  YG   NTV+YN +++G
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           L        + + ++ +  KG  PN  T++ L+    +   V  AM++L+ I   G  PN
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
            +SYN LL   CK+ + ++A+ F   + S+G  P++VSYN LL +LC  G  + A +LL 
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           ++ G   SP +++YN +I  L   GKT  AL++LDEM+    +P   +Y  I + LC E 
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRED 240

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           K++  ++                                F  +Q +G +        Y  
Sbjct: 241 KIEEAIR-------------------------------TFCKVQDMGIRPTVV---LYNA 266

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           ++  LC++ +T+ A  L   M   G  P+  TY+ L+ GL  EGL++EA ++ 
Sbjct: 267 ILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLL 319



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 1/322 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M  KG  PD++    +L  +C+  ++  A++ +E + S G  P+  SY  ++  L  
Sbjct: 4   LDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFT 63

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A +L+E+M   G P N VT+N L+  LC  G +  +++ L+++ + G  PN+ +
Sbjct: 64  AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLS 123

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ LL A  K++ +  AM  ++ ++++G  P++VSYN LLT LC+ G  + AI     L 
Sbjct: 124 YNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLK 183

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P ++SYN ++  L   G+ +EA ELL EM      P I+TY  +   L    K +
Sbjct: 184 GKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIE 243

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A++   ++     RP+   YN I+  LC   +    +     M    C PNE TY  L 
Sbjct: 244 EAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILV 303

Query: 386 M-LCGVGKVQEAFAIIQSLGNK 406
             L   G V+EA  ++  L ++
Sbjct: 304 EGLAYEGLVKEARDLLGQLCSR 325



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 162/298 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +++DA   LE + S G +P+ V    +L  L  A + + A K+ME M   G  P+  
Sbjct: 28  QEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 87

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ LC++G V  AM+++E++  YG   N+++YN L+   C    +++++ F++ +
Sbjct: 88  TFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELM 147

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G  P+  +Y+ LL A  +   V  A+ LL  +  KG  P L+SYN ++ GL K G+T
Sbjct: 148 VSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKT 207

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+    ++ SKG +P++++Y  +   LC E + EEA     ++      PT+V YN +
Sbjct: 208 KEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAI 267

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +  L    +T +A+ +   M+     P+ ++Y  ++  L  EG V      L Q+  R
Sbjct: 268 LLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSR 325



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 98/194 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A   +E MVS+G  PD+V    LL  LC+  ++  AI ++  +   G  P   
Sbjct: 133 KQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLI 192

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +++ L K G    A++L+++M   G   + +TY ++  GLC    + ++++   ++
Sbjct: 193 SYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKV 252

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ P    Y+ +L    K R  H A+ L   +I+ G  PN  +Y +L+ GL  EG  
Sbjct: 253 QDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLV 312

Query: 255 EEAIRFFRDLPSKG 268
           +EA      L S+G
Sbjct: 313 KEARDLLGQLCSRG 326



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 65/134 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K  +A   L+ M+SKG +PD++  T +   LC+ +K+++AI+    +   GI 
Sbjct: 199 DGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIR 258

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    Y  ++  LCK+     A+ L   M   G   N  TY  LV GL   G + ++   
Sbjct: 259 PTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDL 318

Query: 191 LDRLIQKGLVPNAF 204
           L +L  +G+V   F
Sbjct: 319 LGQLCSRGVVNKKF 332


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 251/490 (51%), Gaps = 10/490 (2%)

Query: 55  KDSVYTKPNRKPGNN---NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA 111
           KD+V   P+R    N   ++ +    K ++AF     ++     P +     LL  + K 
Sbjct: 46  KDTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKI 105

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
            +    I + + M   G+ PD  +   L+NC C    V + + ++ +M   G+  NTVT+
Sbjct: 106 KRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTF 165

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
            SLV+GLC+   ++++   L ++++ G  PN  TY  LL           A+KL ++++ 
Sbjct: 166 TSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLN 225

Query: 232 KGG------KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
             G      KPNLV Y  ++  LCK+G  ++    F ++  +G  P+VV+Y+ ++  +C 
Sbjct: 226 GNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCH 285

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            GRWE A  L  EM      P +VT+N+LI +L   GK + A  +L  M++    P   +
Sbjct: 286 TGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFT 345

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
           YN +I   C EG++D        M  +  + +  +YN L    C  G++ EA  + + + 
Sbjct: 346 YNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMM 405

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K+       Y  ++T L R+GK   A+ L  EM  +  TP+S TY+ L+ GLC    + 
Sbjct: 406 CKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLS 465

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+E+F  +E +D++P +  FN L+ GLCK+R+ +++ E+F  +  +G  PN  TYT+++
Sbjct: 466 EAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMI 525

Query: 525 EGIAHQDELE 534
            G+    +LE
Sbjct: 526 HGLCKSGQLE 535



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 230/463 (49%), Gaps = 7/463 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +K++     L  M+ +GH P+ V  T+L+  LC  +++ +A  ++  MV  G  P+  +Y
Sbjct: 141 NKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTY 200

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMED----YGYPT--NTVTYNSLVRGLCMLGNLNQSLQF 190
             L+N LC  GN   A++L E+M +    +G     N V Y +++  LC  G +++  + 
Sbjct: 201 GTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKEL 260

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  +G+ P+   YS ++           A  L ++++ +G  PN+V++NVL+  LCK
Sbjct: 261 FLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCK 320

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ EEA    + +  +G  P+  +YN L+   C+EGR ++A +L   M+        V+
Sbjct: 321 AGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVS 380

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN+LI      G+   A K+  EM+     P+  +YN ++  L  EGKV        +M 
Sbjct: 381 YNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMK 440

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                P   TYN L   LC    + EA  +   L N       + +  +I  LC+  K  
Sbjct: 441 VHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIE 500

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +L   ++  G  P+  TY+ +I GLC  G +E A ++F+ MEE    P++  FN L+
Sbjct: 501 IARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLM 560

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
            G C++      +E+ Q M EK   P+ +T +I+V+ ++  ++
Sbjct: 561 RGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEK 603



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 195/419 (46%), Gaps = 34/419 (8%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP++V    ++  LCK   + K  ++   M   GI PD  +Y+ +++ +C  G    A  
Sbjct: 235 KPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKG 294

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L  +M D G   N VT+N L+  LC  G + ++   L  +IQ+G  P+ FTY+ L++   
Sbjct: 295 LFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFC 354

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
            E  +  A  L   + +KG + + VSYNVL+ G CK GR  EA + +R++  K   P V+
Sbjct: 355 LEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVI 414

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YN LL  L  EG+  +A  L  EM   D +P   TYNIL+  L  +     A+++   +
Sbjct: 415 TYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYL 474

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ 394
               F+PS   +N +I  LC   K+++  +  +++ H   +PN  TY             
Sbjct: 475 ENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYT------------ 522

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
                                  +I  LC+ G+   A  L   M + G  P+  T+++L+
Sbjct: 523 ----------------------VMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLM 560

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           RG C    +++ +E+   M E D+ PD    + ++  L K  +    L +      +GQ
Sbjct: 561 RGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQ 619



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 214/502 (42%), Gaps = 89/502 (17%)

Query: 78  KLNDAFLQLERMVSKG----------HKPDVVQATNLLYDLCKANKMKK--AIKVMEMMV 125
           KL+  F    R +S G          + PD  Q  N L   CK+  +K+  A  V   ++
Sbjct: 25  KLSSLFEHPHRPISPGPISLTKDTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLI 84

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
                P  SS+  L+  + K       + L ++M   G   + +T N L+   C   NLN
Sbjct: 85  DMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYC---NLN 141

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           +                                V   + +L +++ +G  PN V++  L+
Sbjct: 142 K--------------------------------VDFGLAVLGEMLRRGHSPNTVTFTSLV 169

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            GLC   R  EA    R +   G+ PNVV+Y  LL  LCM G    A +L  EM  G+  
Sbjct: 170 KGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGG 229

Query: 306 ------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGK 358
                 P +V Y  +I SL   G  D   ++  EM KGR   P   +Y+ II  +C  G+
Sbjct: 230 FGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEM-KGRGISPDVVAYSSIIHGMCHTGR 288

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
            +      ++M      PN  T+N L                                  
Sbjct: 289 WEGAKGLFNEMVDEGVHPNVVTFNVL---------------------------------- 314

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I +LC+ GK  +A  LL  M + G +PD++TY++LI G C+EG I++A ++FV ME    
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           + D  ++N L+ G CKS R   + ++++ M+ K  MP   TY  L+ G+  + ++  +  
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434

Query: 539 VLKELQLRQVVSESAVERLVMQ 560
           +  E+++  +  ES    +++ 
Sbjct: 435 LFGEMKVHDLTPESCTYNILLD 456



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 170/364 (46%), Gaps = 1/364 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  +G  PDVV  +++++ +C   + + A  +   MV  G+ P+  ++  L++ LCK G 
Sbjct: 264 MKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGK 323

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A  L++ M   G   +T TYN+L+ G C+ G ++ +      +  KG+  +A +Y+ 
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K   +  A KL  +++ K   P +++YN LLTGL +EG+  +A   F ++    
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P   +YNILL  LC      EA EL   ++  D  P+I  +N LI  L    K + A 
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           ++ + +      P+  +Y  +I  LC  G+++        M  + C PN  T+N L    
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF 563

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   ++Q+   ++Q +  K  S        V+  L +  K  +   LL      G T   
Sbjct: 564 CQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQTGRG 623

Query: 448 YTYS 451
           Y  S
Sbjct: 624 YEKS 627



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 88/194 (45%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ K+ DA+     M      P+      LL  LCK N + +A+++   + +    P   
Sbjct: 425 REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQ 484

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  L++ LCK   +  A +L  ++   G   N +TY  ++ GLC  G L  +      +
Sbjct: 485 IFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGM 544

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG  PN  T++ L+    +   +   ++LL ++  K   P+  + ++++  L K+ + 
Sbjct: 545 EEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKY 604

Query: 255 EEAIRFFRDLPSKG 268
            E +      P++G
Sbjct: 605 REYLHLLPTFPAQG 618


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 251/473 (53%), Gaps = 12/473 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  A + L +MVSKG  PDV   T +++ LC  N++ +A K +E M +  + P+  +YT
Sbjct: 26  RLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G V  A+ L+ KM     PT  VTYNSL+ GLC     +++   L+ ++  
Sbjct: 86  VLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKAERASEAYDLLEEMVYS 144

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+ FTY+ L+    K +    A+++ + ++A+G +P++V+Y+ L+ GLCKEGR +EA
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204

Query: 258 IRFF-RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           I  F R + S    PN V+YN L+   C  G+ +EA  LL  M     SP +VTY  L+ 
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A  +L++M +    P   ++  ++  LC E ++   V  L +M  + C P
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQL 434
              TYN  L   C   +++EA   +     + +  P    +  +I  LC+  ++ +A +L
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFMLE---EMDCPPNVVSFNIMIRGLCKVNRSSEAMEL 381

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLC 493
           + E  +    PD   Y+++I GLC E  ++EA  ++  M EE    P+   ++ L+ GLC
Sbjct: 382 VEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLC 441

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +   D +    +  IEKG +PN  TY +L++     +  E + E+L ++  R
Sbjct: 442 NAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 231/441 (52%), Gaps = 6/441 (1%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           D V  T+L+  LCK  ++++A+  +  MVS G  PD  +YT +++ LC +  +  A + +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
           E+M +     N VTY  L+ GLC  G +++++  L ++ +K  VP A TY+ L+    K 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKA 128

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
                A  LL++++  G  P++ +Y  L+TG CK  ++++A+R F  L ++GF P+VV+Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 277 NILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           + L+  LC EGR +EA +L   M   G   P  VTYN LI      GK D A+ +L+ M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           +    P   +Y  ++   C   ++D     L+QM  +   P+  T+  L   LC   ++ 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A  I+  +  K  S     Y  ++   CR  +  +A + + E  +    P+  +++ +I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMI 366

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK-GQ 513
           RGLC      EA+E+          PDV  +  ++ GLC+ ++ D +  V++ M+E+ G 
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 514 MPNETTYTILVEGIAHQDELE 534
           +PN  TY+ L+ G+ +   L+
Sbjct: 427 LPNSITYSTLITGLCNAGMLD 447



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 205/382 (53%), Gaps = 7/382 (1%)

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           VTY SL++GLC +  L Q+L FL +++ KG  P+ +TY+ ++ A   E  +H A K L++
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +  +   PN+V+Y VL+ GLCK GR +EA+     +  K   P  V+YN L+  LC   R
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             EA +LL EM      P I TY  LI       K+D AL+V +++V   FRP   +Y+ 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 349 IIARLCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNK 406
           +I  LC EG++   +    +M     C PN  TYN L +  C +GK+ EA  +++ +   
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
            +S     Y  ++   C+  +   A+ LL +MT+ G TPD  T++SL+ GLC E  + +A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVE 525
           + I   M      P V  +N +L G C++ + +   E  + M+E+    PN  ++ I++ 
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLE---EARKFMLEEMDCPPNVVSFNIMIR 367

Query: 526 GIAHQDELELSAEVLKELQLRQ 547
           G+   +    + E+++E + R+
Sbjct: 368 GLCKVNRSSEAMELVEEARRRR 389



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 226/441 (51%), Gaps = 12/441 (2%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           +++L++A   LE M ++   P+VV  T L+  LCK  ++ +A+ ++  M     +P A +
Sbjct: 59  ENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVT 117

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L++ LCK      A  L+E+M   G   +  TY +L+ G C     + +L+  ++L+
Sbjct: 118 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRT 254
            +G  P+  TYS L++   KE  +  A+ L   +I  G   PN V+YN L++G C+ G+ 
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+     +   G  P+VV+Y  L+   C   R ++A +LL +M     +P +VT+  L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK-CLDQMFHRR 373
           +  L    +   A+ +L EM +    P+  +YN I+   C   +++   K  L++M    
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---D 354

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  ++N +   LC V +  EA  +++    ++ +     Y  VI  LCR+ K  +A 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 433 QLLYEMTKY-GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           ++  +M +  G  P+S TYS+LI GLC  G+++ A        E    P++  +N L+  
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDA 470

Query: 492 LCKSRRTDLSLEVFQMMIEKG 512
             K+ R + + E+   M+++G
Sbjct: 471 FRKANRDEDARELLDDMVQRG 491



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 192/371 (51%), Gaps = 11/371 (2%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            + ++A+  LE MV  G  PD+   T L+   CK+ K   A++V E +V+ G  PD  +Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           + L++ LCK+G +  A+ L  +M   G    NTVTYNSL+ G C +G +++++  L+R+ 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  TY+ L+    K   +  A  LL+ +  KG  P++V++  L+ GLC+E R  
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE-LLAEMDGGDRSPTIVTYNIL 314
           +A+    ++  K   P V +YN +L   C   + EEA + +L EMD     P +V++NI+
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC---PPNVVSFNIM 365

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-R 373
           I  L    ++  A+++++E  + R  P    Y  +I  LC E KVD   +   +M     
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  TY+ L   LC  G +  A   I+  G   N      Y  +I +  +  +   A 
Sbjct: 426 CLPNSITYSTLITGLCNAGMLDRARGYIEK-GCVPNIGT---YNLLIDAFRKANRDEDAR 481

Query: 433 QLLYEMTKYGF 443
           +LL +M + GF
Sbjct: 482 ELLDDMVQRGF 492



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 164/310 (52%), Gaps = 3/310 (0%)

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           + V+Y  L+ GLCK  R E+A+ F   + SKGF P+V +Y  ++ +LC+E R  EA + L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM   + +P +VTY +LI  L   G+ D A+ +L +M K +  P+A +YN +I+ LC  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKA 128

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            +       L++M +  C P+  TY  L    C   K  +A  + + L  +        Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYG-FTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
             +I  LC++G+  +A  L   M K G   P++ TY+SLI G C  G ++EA+ +   M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E    PDV  +  L+ G CK  R D + ++   M  KG  P+  T+T L++G+  ++ L 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 535 LSAEVLKELQ 544
            +  +L E++
Sbjct: 309 DAVHILGEMR 318



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 172/313 (54%), Gaps = 10/313 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDA 133
           +  K +DA    E++V++G +PDVV  + L+  LCK  ++K+AI +   M+ SG  +P+ 
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  L++  C+ G +  AM L+E+M + G   + VTY +L+ G C L  L+ +   L++
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +KGL P+  T++ L++   +E  +  A+ +L ++  K   P + +YN +L G C+  +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA +F   L      PNVVS+NI++R LC   R  EA EL+ E      +P +V Y  
Sbjct: 342 LEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399

Query: 314 LIGSLAYHGKTDHALKVLDEMVK--GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           +I  L    K D A +V  +M++  G   P++ +Y+ +I  LC+ G +D           
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCL-PNSITYSTLITGLCNAGMLDRA----RGYIE 454

Query: 372 RRCKPNEGTYNGL 384
           + C PN GTYN L
Sbjct: 455 KGCVPNIGTYNLL 467



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%)

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           + D  TY+SLI+GLC    +E+AL     M    + PDV  + A++  LC   R   + +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             + M  +   PN  TYT+L++G+     ++ +  +L +++ + V
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV 112


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 251/473 (53%), Gaps = 12/473 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  A + L +MVSKG  PDV   T +++ LC  N++ +A K +E M +  + P+  +YT
Sbjct: 26  RLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G V  A+ L+ KM     PT  VTYNSL+ GLC     +++   L+ ++  
Sbjct: 86  VLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKAERASEAYDLLEEMVYS 144

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+ FTY+ L+    K +    A+++ + ++A+G +P++V+Y+ L+ GLCKEGR +EA
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204

Query: 258 IRFF-RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           I  F R + S    PN V+YN L+   C  G+ +EA  LL  M     SP +VTY  L+ 
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A  +L++M +    P   ++  ++  LC E ++   V  L +M  + C P
Sbjct: 265 GFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 324

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQL 434
              TYN  L   C   +++EA   +     + +  P    +  +I  LC+  ++ +A +L
Sbjct: 325 TVYTYNTILDGYCRANQLEEARKFMLE---EMDCPPNVVSFNIMIRGLCKVNRSSEAMEL 381

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLC 493
           + E  +    PD   Y+++I GLC E  ++EA  ++  M EE    P+   ++ L+ GLC
Sbjct: 382 VEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLC 441

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +   D +    +  IEKG +PN  TY +L++     +  E + E+L ++  R
Sbjct: 442 NAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 231/441 (52%), Gaps = 6/441 (1%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           D V  T+L+  LCK  ++++A+  +  MVS G  PD  +YT +++ LC +  +  A + +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
           E+M +     N VTY  L+ GLC  G +++++  L ++ +K  VP A TY+ L+    K 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKA 128

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
                A  LL++++  G  P++ +Y  L+TG CK  ++++A+R F  L ++GF P+VV+Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 277 NILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           + L+  LC EGR +EA +L   M   G   P  VTYN LI      GK D A+ +L+ M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           +    P   +Y  ++   C   ++D     L+QM  +   P+  T+  L   LC   ++ 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A  I+  +  K  S     Y  ++   CR  +  +A + + E  +    P+  +++ +I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMI 366

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK-GQ 513
           RGLC      EA+E+          PDV  +  ++ GLC+ ++ D +  V++ M+E+ G 
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 514 MPNETTYTILVEGIAHQDELE 534
           +PN  TY+ LV G+ +   L+
Sbjct: 427 LPNSITYSTLVTGLCNAGMLD 447



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 205/382 (53%), Gaps = 7/382 (1%)

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           VTY SL++GLC +  L Q+L FL +++ KG  P+ +TY+ ++ A   E  +H A K L++
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +  +   PN+V+Y VL+ GLCK GR +EA+     +  K   P  V+YN L+  LC   R
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             EA +LL EM      P I TY  LI       K+D AL+V +++V   FRP   +Y+ 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 349 IIARLCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNK 406
           +I  LC EG++   +    +M     C PN  TYN L +  C +GK+ EA  +++ +   
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
            +S     Y  ++   C+  +   A+ LL +MT+ G TPD  T++SL+ GLC E  + +A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVE 525
           + I   M      P V  +N +L G C++ + +   E  + M+E+    PN  ++ I++ 
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLE---EARKFMLEEMDCPPNVVSFNIMIR 367

Query: 526 GIAHQDELELSAEVLKELQLRQ 547
           G+   +    + E+++E + R+
Sbjct: 368 GLCKVNRSSEAMELVEEARRRR 389



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 226/441 (51%), Gaps = 12/441 (2%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           +++L++A   LE M ++   P+VV  T L+  LCK  ++ +A+ ++  M     +P A +
Sbjct: 59  ENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVT 117

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L++ LCK      A  L+E+M   G   +  TY +L+ G C     + +L+  ++L+
Sbjct: 118 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRT 254
            +G  P+  TYS L++   KE  +  A+ L   +I  G   PN V+YN L++G C+ G+ 
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+     +   G  P+VV+Y  L+   C   R ++A +LL +M     +P +VT+  L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK-CLDQMFHRR 373
           +  L    +   A+ +L EM +    P+  +YN I+   C   +++   K  L++M    
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---D 354

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  ++N +   LC V +  EA  +++    ++ +     Y  VI  LCR+ K  +A 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 433 QLLYEMTKY-GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           ++  +M +  G  P+S TYS+L+ GLC  G+++ A        E    P++  +N L+  
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDA 470

Query: 492 LCKSRRTDLSLEVFQMMIEKG 512
             K+ R + + E+   M+++G
Sbjct: 471 FRKANRDEDARELLDDMVQRG 491



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 192/371 (51%), Gaps = 11/371 (2%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            + ++A+  LE MV  G  PD+   T L+   CK+ K   A++V E +V+ G  PD  +Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           + L++ LCK+G +  A+ L  +M   G    NTVTYNSL+ G C +G +++++  L+R+ 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  TY+ L+    K   +  A  LL+ +  KG  P++V++  L+ GLC+E R  
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE-LLAEMDGGDRSPTIVTYNIL 314
           +A+    ++  K   P V +YN +L   C   + EEA + +L EMD     P +V++NI+
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC---PPNVVSFNIM 365

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-R 373
           I  L    ++  A+++++E  + R  P    Y  +I  LC E KVD   +   +M     
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  TY+ L   LC  G +  A   I+  G   N      Y  +I +  +  +   A 
Sbjct: 426 CLPNSITYSTLVTGLCNAGMLDRARGYIEK-GCVPNIGT---YNLLIDAFRKANRDEDAR 481

Query: 433 QLLYEMTKYGF 443
           +LL +M + GF
Sbjct: 482 ELLDDMVQRGF 492



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 164/310 (52%), Gaps = 3/310 (0%)

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           + V+Y  L+ GLCK  R E+A+ F   + SKGF P+V +Y  ++ +LC+E R  EA + L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM   + +P +VTY +LI  L   G+ D A+ +L +M K +  P+A +YN +I+ LC  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKA 128

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            +       L++M +  C P+  TY  L    C   K  +A  + + L  +        Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYG-FTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
             +I  LC++G+  +A  L   M K G   P++ TY+SLI G C  G ++EA+ +   M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E    PDV  +  L+ G CK  R D + ++   M  KG  P+  T+T L++G+  ++ L 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 535 LSAEVLKELQ 544
            +  +L E++
Sbjct: 309 DAVHILGEMR 318



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 172/313 (54%), Gaps = 10/313 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDA 133
           +  K +DA    E++V++G +PDVV  + L+  LCK  ++K+AI +   M+ SG  +P+ 
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  L++  C+ G +  AM L+E+M + G   + VTY +L+ G C L  L+ +   L++
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 281

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +KGL P+  T++ L++   +E  +  A+ +L ++  K   P + +YN +L G C+  +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA +F   L      PNVVS+NI++R LC   R  EA EL+ E      +P +V Y  
Sbjct: 342 LEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399

Query: 314 LIGSLAYHGKTDHALKVLDEMVK--GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           +I  L    K D A +V  +M++  G   P++ +Y+ ++  LC+ G +D           
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCL-PNSITYSTLVTGLCNAGMLDRA----RGYIE 454

Query: 372 RRCKPNEGTYNGL 384
           + C PN GTYN L
Sbjct: 455 KGCVPNIGTYNLL 467



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%)

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           + D  TY+SLI+GLC    +E+AL     M    + PDV  + A++  LC   R   + +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             + M  +   PN  TYT+L++G+     ++ +  +L +++ + V
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV 112


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 229/439 (52%), Gaps = 4/439 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G +P VV  + L+  LC+ +++ K  K++E M   G  P+A +Y  LVN L  +G    A
Sbjct: 96  GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEA 155

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL--IQKGLVPNAFTYSFLL 210
             L+E+M   G P   +T+  +++GLC  G +  + + +D +  I+ GL P+  T++ +L
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVL 215

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           +   KE+ +  A  +    + +G +PN+V+Y+ L+ GL K  + +EA++    +   G  
Sbjct: 216 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 275

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
            N V+Y+ ++  L   GR E+A  +L +M      P  VTYN LI       +   A+ +
Sbjct: 276 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 335

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCG 389
           L EM++  F PS  +Y  +   LC  G+ D  V+ LD M  R C PN  TY+ +   LC 
Sbjct: 336 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 395

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
            G+V EA    + +   +  +P    Y  +I  LC+ GK  +A++ L  M + G  PD  
Sbjct: 396 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVV 455

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           T+S LI GLC  G I+  LE+F  M E    PD+  +  L+  LC++ R D + ++FQ M
Sbjct: 456 TFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQM 515

Query: 509 IEKGQMPNETTYTILVEGI 527
              G  P+ +T   ++ G+
Sbjct: 516 RSDGLSPDRSTRRTMIHGL 534



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 252/485 (51%), Gaps = 11/485 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A    ++MV K   PDVV    L+  L K  ++K+A  + E   + G  P   
Sbjct: 7   KSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVV 66

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKME-DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +Y  +++ LCK G +  A+ L + M   +G+    VTY++L+ GLC    +++  + L+ 
Sbjct: 67  TYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEE 126

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  +G  PNA TY+ L+ A   +     A  LL+ + A G  P L+++ +++ GLCKEG 
Sbjct: 127 MAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE 186

Query: 254 TEEAIRFFRDL--PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-MDGGDRSPTIVT 310
            E A R   ++     G  P+V+++N +L  LC E R  +A+ +    ++ G R P +VT
Sbjct: 187 IEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR-PNVVT 245

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI  L+   K D AL++L +MV+   R +  +Y+ ++  L   G+++  V  L QM 
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
              C P+  TYN L  + G  K Q   EA  +++ +           Y  +   LCR G+
Sbjct: 306 DAGCLPDAVTYNTL--IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 363

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY-KPDVDNFN 486
             +A ++L  M   G  P++ TYSS++ GLC  G + EAL  F  M   +   P V  ++
Sbjct: 364 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 423

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           AL+ GLCK+ + D + E  + MI  G++P+  T++IL+ G+     ++   E+ + +  R
Sbjct: 424 ALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483

Query: 547 QVVSE 551
             V +
Sbjct: 484 GCVPD 488



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 216/453 (47%), Gaps = 43/453 (9%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LCK+ K+ KAI + + MV   I PD  +Y  L++ L K+  V  A  L E+    G    
Sbjct: 5   LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 64

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            VTYN+++ GLC                + G + NA T        Y +  +H       
Sbjct: 65  VVTYNTMIDGLC----------------KCGRIENALTL-------YDDMAIHF------ 95

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
                G +P +V+Y+ L+ GLC++   ++  +   ++  +G  PN V+YN L+ +L  +G
Sbjct: 96  -----GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQG 150

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE--MVKGRFRPSAAS 345
           R +EA  LL +M      P ++T+ ++I  L   G+ + A +V+DE  M++    P   +
Sbjct: 151 RSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVIT 210

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQ 401
           +N ++  LC E ++        +   R C+PN  TY    +GL+ +  + +  +  A + 
Sbjct: 211 FNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            LG + N+     Y  V+  L + G+   A  +L +M   G  PD+ TY++LI G     
Sbjct: 271 ELGCRANTVT---YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQ 327

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            + EA+ +   M E  + P V  +  L  GLC+S R D ++E+   M  +G  PN  TY+
Sbjct: 328 RLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYS 387

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +V+G+     +  +    +++   +VV+   +
Sbjct: 388 SIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 197/381 (51%), Gaps = 4/381 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME--MMVSSGIIPDASSYTY 138
           +AF  LE+M + G  P+++    ++  LCK  +++ A +V++   M+ SG+ PD  ++  
Sbjct: 154 EAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNS 213

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++ LCK+  +  A  + ++  + G   N VTY++L+ GL  +  ++++LQ L ++++ G
Sbjct: 214 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 273

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N  TYS +++   K   +  A+ +L  +   G  P+ V+YN L+ G  K  R  EA+
Sbjct: 274 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 333

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
              R++   GF P+VV+Y  L   LC  GR++EA E+L  M     +P  +TY+ ++  L
Sbjct: 334 GLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 393

Query: 319 AYHGKTDHALKVLDEMVKGRF-RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              G+   AL   ++M +     P   +Y+ +I  LC  GK+D   + L++M      P+
Sbjct: 394 CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPD 453

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T++ L   LC  G++     + + +  +        Y  ++  LCR  +  +AF L  
Sbjct: 454 VVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQ 513

Query: 437 EMTKYGFTPDSYTYSSLIRGL 457
           +M   G +PD  T  ++I GL
Sbjct: 514 QMRSDGLSPDRSTRRTMIHGL 534



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 161/307 (52%), Gaps = 1/307 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ DA    +R + +G +P+VV  + L+  L K  KM +A++++  MV  G   +  
Sbjct: 220 KEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV 279

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +V+ L K G +  A+ ++ +M D G   + VTYN+L+ G      L +++  L  +
Sbjct: 280 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 339

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  TY+ L     +      A+++LD + A+G  PN ++Y+ ++ GLCK GR 
Sbjct: 340 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 399

Query: 255 EEAIRFFRDLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EA+ +F  +   +   P+V++Y+ L+  LC  G+ +EA E L  M    R P +VT++I
Sbjct: 400 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSI 459

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+ D  L++   M +    P   +Y  ++ RLC   +VD       QM    
Sbjct: 460 LINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDG 519

Query: 374 CKPNEGT 380
             P+  T
Sbjct: 520 LSPDRST 526



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 137/257 (53%), Gaps = 1/257 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA + L +M   G  PD V    L+    K  ++++A+ ++  M+ +G  P   +YT
Sbjct: 293 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 352

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L + LC+ G    A+++++ M   G   N +TY+S+V GLC  G + ++L + +++ + 
Sbjct: 353 TLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARD 412

Query: 198 GLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            +V P+   YS L++   K   +  A + L+ +I  G  P++V++++L+ GLC  GR + 
Sbjct: 413 EVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDT 472

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            +  FR +  +G  P++V+Y  L+  LC   R +EA +L  +M     SP   T   +I 
Sbjct: 473 GLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIH 532

Query: 317 SLAYHGKTDHALKVLDE 333
            L    + + A ++ DE
Sbjct: 533 GLLEVNRDEDAKRIQDE 549


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 156/516 (30%), Positives = 260/516 (50%), Gaps = 40/516 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME-MMVSSGI 129
           D   +  ++++A   L  M S+G  P+VV   +++  LCK+++  +A ++ + M +  G+
Sbjct: 438 DAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGL 497

Query: 130 IPDASSY---------------------------TYLVNC----LCKKGNVGYAMQLVEK 158
           +PD  +Y                           TY  NC    L K G+V  A+Q+  +
Sbjct: 498 VPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNR 557

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M +     + VT+N L+ G C  GN  Q+    + ++ K L P+  T+  L++   K   
Sbjct: 558 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 617

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           V AA  +LD +   G  PN+V+YN L+ GLCK GR EEA +F  ++ S G  P+ ++Y  
Sbjct: 618 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 677

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+ +LC   R ++A +L++E+      P  VTYNIL+  L   G+T+ A+ VL+EMV   
Sbjct: 678 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKG 737

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQM---FHRRCKPNEGTYNGLAM-LCGVGKVQ 394
             P   +YN +I  LC  G ++   +    M     R C PN  TY+ L   LC VG++ 
Sbjct: 738 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRID 797

Query: 395 EAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGF--TPDSYTY 450
           EA  +IQ +  K          Y   +  LC++    +A +L+  +       +PD+ T+
Sbjct: 798 EARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTF 857

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S+LI GLC  G  +EA  +F  M    Y P+V  +N L+ GLCK+ + + +  + + M++
Sbjct: 858 STLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVD 917

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           KG  P+  TY++LV+       ++ + E+L  +  R
Sbjct: 918 KGVTPDVITYSVLVDAFCKASHVDEALELLHGMASR 953



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 258/492 (52%), Gaps = 37/492 (7%)

Query: 86   LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            L+ M + G  P+VV    L++ LCK+ ++++A + +E MVSSG +PD+ +Y  LV  LC+
Sbjct: 625  LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684

Query: 146  KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                  A+QLV +++ +G+  +TVTYN LV GL   G   Q++  L+ ++ KG  P+  T
Sbjct: 685  ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT 744

Query: 206  YSFLLEAAYKERGVHAAMKLLDDI---IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            Y+ L+++  K   +  A +L  D+   +++   PN+V+Y+VL+ GLCK GR +EA    +
Sbjct: 745  YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ 804

Query: 263  DLPSKGFE--PNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDR-SPTIVTYNILIGSL 318
            ++  K  +  PN+++YN  L  LC +    EA EL+  + DG  R SP  VT++ LI  L
Sbjct: 805  EMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 864

Query: 319  AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               G+TD A  V D+M+ G + P+  +YN ++  LC   K++     ++ M  +   P+ 
Sbjct: 865  CKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDV 924

Query: 379  GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TY+ L    C    V EA  ++  + ++  +     +  +I  LC+  ++ +AFQ+  +
Sbjct: 925  ITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDD 984

Query: 438  MT-KYGFTPDSYTYSSLIRGL--------------------------CMEGL--IEEALE 468
            MT K+G  PD  TY +LI GL                          C+ GL  + +   
Sbjct: 985  MTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSR 1044

Query: 469  IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
                M E +  PD   FN L+ G CK+   + +  +F+ M+ K   P+  T+  L++G+ 
Sbjct: 1045 ALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 1104

Query: 529  HQDELELSAEVL 540
               ++E + +++
Sbjct: 1105 KAGQVEATWDIM 1116



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 242/474 (51%), Gaps = 11/474 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A    + M++ G+ P+V+    L+  LCKA+KM++A  ++E MV  G+ PD  +Y+
Sbjct: 375 QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 434

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL-IQ 196
            LV+  CK   V  A++L+  M   G   N VT+NS++ GLC      ++ Q  D + ++
Sbjct: 435 VLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALK 494

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            GLVP+  TY  L++  ++      A  LLD +      P+  ++N  + GL K G    
Sbjct: 495 HGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM----PDPDTYAFNCCINGLSKLGDVSR 550

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++ +  +      P+ V++NIL+   C  G +E+A+ L  EM   +  P ++T+  LI 
Sbjct: 551 ALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 610

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G+ + A  +LD M      P+  +YN ++  LC  G+++   + L++M    C P
Sbjct: 611 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 670

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY  L   LC   +  +A  ++  L +         Y  ++  L + G+T QA  +L
Sbjct: 671 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVL 730

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK---PDVDNFNALLLGL 492
            EM   G  PD  TY++LI  LC  G +EEA  +   M     +   P+V  ++ L+ GL
Sbjct: 731 EEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGL 790

Query: 493 CKSRRTDLSLEVFQMMIEKG--QMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           CK  R D + E+ Q M+ K    +PN  TY   ++G+  Q  +  + E+++ L+
Sbjct: 791 CKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR 844



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 239/467 (51%), Gaps = 10/467 (2%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTYLVNCLCKKGNVGYAM 153
           P+++   + L  LCK +   +A ++M  +      + PD  +++ L++ LCK G +  A 
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 380

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            + + M   GY  N +TYN+LV GLC    + ++   ++ ++ KG+ P+  TYS L++A 
Sbjct: 381 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 440

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPN 272
            K   V  A++LL  + ++G  PN+V++N ++ GLCK  R+ EA + F D+  K G  P+
Sbjct: 441 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPD 500

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            ++Y  L+  L   GR  +A  LL  M      P    +N  I  L+  G    AL+V +
Sbjct: 501 KITYCTLIDGLFRTGRAGQAEALLDAM----PDPDTYAFNCCINGLSKLGDVSRALQVYN 556

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
            M++    P   ++N +IA  C  G  +      ++M  +  +P+  T+  L   LC  G
Sbjct: 557 RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 616

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           +V+ A  I+  +GN         Y  ++  LC+ G+  +A Q L EM   G  PDS TY 
Sbjct: 617 QVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYG 676

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SL+  LC     ++AL++   ++ + + PD   +N L+ GL KS +T+ ++ V + M+ K
Sbjct: 677 SLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGK 736

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
           G  P+  TY  L++ +    +LE +  +  ++  R  VS   V  +V
Sbjct: 737 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR--VSRCCVPNVV 781



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 236/472 (50%), Gaps = 14/472 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P +V    ++  LCK+N++   +++ E +V  G  PD  +Y  L++ LCK G+
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG--LVPNAFTY 206
           +  A +L   M       N VTY+ L+ GLC +G ++++ + +  + +K   ++PN  TY
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGG----KPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           +  L+   K+     A +L+  +  + G     P+ V+++ L+ GLCK G+ +EA   F 
Sbjct: 327 NSFLDGLCKQSMTAEACELMRSL--RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           D+ + G+ PNV++YN L+  LC   + E A+ ++  M     +P ++TY++L+ +     
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 444

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM-FHRRCKPNEGTY 381
           + D AL++L  M      P+  ++N II  LC   +     +  D M       P++ TY
Sbjct: 445 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITY 504

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L   L   G+  +A A++ ++ +    +    +   I  L + G   +A Q+   M +
Sbjct: 505 CTLIDGLFRTGRAGQAEALLDAMPDPDTYA----FNCCINGLSKLGDVSRALQVYNRMLE 560

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
               PD  T++ LI G C  G  E+A  +F  M   + +PDV  F AL+ GLCK+ + + 
Sbjct: 561 LELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 620

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           + ++  +M   G  PN  TY  LV G+     +E + + L+E+     V +S
Sbjct: 621 ARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 672



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 208/443 (46%), Gaps = 73/443 (16%)

Query: 171 YNSLVRGLCMLGNLNQSLQ-FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           YN +++ LC  G   ++L+ F   + + G+ P   TY+ ++    K   + A M+L +++
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           + +G  P++V+YN L+  LCK G  EEA R   D+ S+   PNVV+Y++L+  LC  GR 
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302

Query: 290 EEANELLAEM--------------------------------------DGGDR-SPTIVT 310
           +EA EL+ EM                                      DG  R SP  VT
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           ++ LI  L   G+ D A  V D+M+ G + P+  +YN ++  LC   K++     ++ M 
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +   P+  TY+ L    C   +V EA  ++  + ++  +     +  +I  LC+  ++ 
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482

Query: 430 QAFQLLYEMT-KYGFTPDSYTYSSLIRGL--------------------------CMEGL 462
           +AFQ+  +M  K+G  PD  TY +LI GL                          C+ GL
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGL 542

Query: 463 -----IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
                +  AL+++  M E +  PD   FN L+ G CK+   + +  +F+ M+ K   P+ 
Sbjct: 543 SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602

Query: 518 TTYTILVEGIAHQDELELSAEVL 540
            T+  L++G+    ++E + ++L
Sbjct: 603 MTFGALIDGLCKAGQVEAARDIL 625



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 20/229 (8%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            +  K+  A   +E MV KG  PDV+  + L+   CKA+ + +A++++  M S G  P+  
Sbjct: 901  KTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVV 960

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKME-DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            ++  +++ LCK    G A Q+ + M   +G   + +TY +L+ GL   G   Q+   LD 
Sbjct: 961  TFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDA 1020

Query: 194  LIQKGLVPNAFTYSF------LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
            +      P+  TY+F      L +     R +H  ++L  +++     P+ V++N+L+ G
Sbjct: 1021 M------PDPDTYAFNCCINGLSKLGDVSRALHRMLEL--ELV-----PDKVTFNILIAG 1067

Query: 248  LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
             CK G  E+A   F ++ +K  +P+V+++  L+  LC  G+ E   +++
Sbjct: 1068 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 242/457 (52%), Gaps = 1/457 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RMVS+G KPDV     L+  LC+A++++ AI +ME M S G+ PD  ++T L+    ++G
Sbjct: 201 RMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG 260

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N+  A+++ E+M   G P++ VT N LV G C  G + + L F+D +  +G  P+ FT++
Sbjct: 261 NMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    +   V  A+++LD ++ +G  P++ +YN L+ GLCK G  EEA+     +  +
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR 380

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
            F PN V+YN L+ +LC E + EEA EL   +      P + T+N LI  L        A
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
           +++ +EM      P   +YN +I  LCS G+++  +  L +M    C  N  TYN L   
Sbjct: 441 MELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDG 500

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C   +++EA  I   +  +  S     Y  +I  LC+  +  +A QL+ +M   G  PD
Sbjct: 501 FCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            +TY+SL+   C  G I++A +I   M     +PD   +  L+LGL K+ R +L+  + +
Sbjct: 561 KFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +  KG +    TY  +++ +  +     +  + +E+
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREM 657



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 237/455 (52%), Gaps = 3/455 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H++  A L +E M S G  PD    T L+    +   M  A+++ E MV++G      
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   LV+  CK+G +   +  +++M + G+  +  T+NSLV GLC +G++  +L+ LD +
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+G  P+ FTY+ L+    K   V  A+++L+ +I +   PN V+YN L++ LCKE + 
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA    R L SKG  P+V ++N L++ LC+      A EL  EM      P   TYN+L
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL   G+ + AL +L EM       +  +YN +I   C   +++   +  D+M  +  
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
             N  TYN L   LC   +V+EA  ++  +   +   P +F Y  ++T  CR G   +A 
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQM-LMEGLKPDKFTYNSLLTYFCRAGDIKKAA 581

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            ++  MT  G  PDS TY +LI GL   G +E A  +   ++          +N ++  L
Sbjct: 582 DIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKAL 641

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            + +RT  ++ +F+ M+EKG  P+  TY ++  G+
Sbjct: 642 FREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGL 676



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 234/455 (51%), Gaps = 10/455 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N A    E+MV+ G     V    L++  CK  ++++ +  ++ M + G  PD  ++  
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LVN LC+ G+V +A+++++ M   G+  +  TYNSL+ GLC LG + ++++ L+++I + 
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY+ L+    KE  V  A +L   + +KG  P++ ++N L+ GLC       A+
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG  P+  +YN+L+ SLC  GR EEA  LL EM+    S  +VTYN LI   
Sbjct: 442 ELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGF 501

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             + + + A ++ DEM       +  +YN +I  LC   +V+   + +DQM     KP++
Sbjct: 502 CKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDK 561

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN  L   C  G +++A  I+Q++ +         Y  +I  L + G+   A +LL  
Sbjct: 562 FTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRT 621

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK--- 494
           +   G      TY+ +I+ L  E    EA+ +F  M E    PD   +  +  GLC    
Sbjct: 622 VQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGG 681

Query: 495 --SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
                 D  +E    M +KG +P+ +++ +L EG+
Sbjct: 682 PIGEAVDFLVE----MTDKGFLPDFSSFLMLAEGL 712



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 237/458 (51%), Gaps = 1/458 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G K D      LL  L   NK+K    V   MVS GI PD +++  L+  LC+   +  A
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPA 230

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + ++E+M  YG   +  T+ +L++G    GN+N +L+  ++++  G   +  T + L+  
Sbjct: 231 ILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHG 290

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             KE  +   +  +D++  +G +P+  ++N L+ GLC+ G  + A+     +  +GF+P+
Sbjct: 291 YCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPD 350

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           + +YN L+  LC  G  EEA E+L +M   D SP  VTYN LI +L    + + A ++  
Sbjct: 351 IFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELAR 410

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
            +      P   ++N +I  LC      L ++  ++M  + C P+E TYN L   LC  G
Sbjct: 411 VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRG 470

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           +++EA ++++ + +   S     Y  +I   C+  +  +A ++  EM   G + +  TY+
Sbjct: 471 RLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LI GLC    +EEA ++   M     KPD   +N+LL   C++     + ++ Q M   
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN 590

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           G  P+  TY  L+ G++    +EL++ +L+ +QL+ +V
Sbjct: 591 GCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV 628



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 255/547 (46%), Gaps = 24/547 (4%)

Query: 10  TLANPSP--------EPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTK 61
           TL  P P        +PF K   F S     H         + ++ +  T+SP  +    
Sbjct: 17  TLTQPPPTLSSAHNCKPFSKLISFTST----HHHDQ-----QAVSPSFSTLSPSPTTQLP 67

Query: 62  PNRKPGNNNDTRHRDHKLNDAFLQLERMVSK--GHKPDVVQATNLLYDLCKANKMKKAIK 119
            N  P    D   R     D+ L L    SK     P  V    +L  L K        +
Sbjct: 68  QNFTPKQLRDALRRQSD-EDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED-YGYPTNTVTYNSLVRGL 178
           V++ M  +G      ++  L+    K      A+ +V+ ME+ +G   +  TYN L+  L
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 179 CMLGNLNQSLQFLD-RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
            + GN  + ++ ++ R++ +G+ P+  T++ L++A  +   +  A+ +++++ + G  P+
Sbjct: 187 -VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPD 245

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
             ++  L+ G  +EG    A+R    + + G   + V+ N+L+   C EGR EE    + 
Sbjct: 246 EKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFID 305

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           EM      P   T+N L+  L   G   HAL++LD M++  F P   +YN +I  LC  G
Sbjct: 306 EMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLG 365

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           +V+  V+ L+QM  R   PN  TYN L + LC   +V+EA  + + L +K        + 
Sbjct: 366 EVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 425

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I  LC       A +L  EM   G  PD +TY+ LI  LC  G +EEAL +   ME  
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS 485

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
               +V  +N L+ G CK++R + + E+F  M  +G   N  TY  L++G+     +E +
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEA 545

Query: 537 AEVLKEL 543
           A+++ ++
Sbjct: 546 AQLMDQM 552



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 38/297 (12%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           +H+L  A    E M +KG  PD      L+  LC   ++++A+ +++ M SSG   +  +
Sbjct: 436 NHRL--AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVT 493

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L++  CK   +  A ++ ++ME  G   N VTYN+L+ GLC    + ++ Q +D+++
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            +GL P+ FTY+ LL    +   +  A  ++  + + G +P+ V+Y  L+ GL K GR E
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVE 613

Query: 256 -----------------------------------EAIRFFRDLPSKGFEPNVVSYNILL 280
                                              EA+R FR++  KG  P+ V+Y ++ 
Sbjct: 614 LASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVF 673

Query: 281 RSLCM-EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           R LC   G   EA + L EM      P   ++ +L   L      D  +K+++ ++K
Sbjct: 674 RGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMK 730



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 116/211 (54%), Gaps = 1/211 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ +A    + M  +G   +VV    L+  LCK  ++++A ++M+ M+  G+ PD  
Sbjct: 503 KNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKF 562

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   C+ G++  A  +V+ M   G   ++VTY +L+ GL   G +  + + L  +
Sbjct: 563 TYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTV 622

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGR 253
             KG+V    TY+ +++A ++E+    A++L  +++ KG  P+ V+Y V+  GLC   G 
Sbjct: 623 QLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGP 682

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
             EA+ F  ++  KGF P+  S+ +L   LC
Sbjct: 683 IGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC 713


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 240/466 (51%), Gaps = 1/466 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KLNDA    ++++  G  P  V  T+L++ LC AN    A ++   M   G  P   +Y 
Sbjct: 25  KLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 84

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK+G +  A  L++KM + G+  + VTYN+++ GLC  G + ++L   + + + 
Sbjct: 85  VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERL 144

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  +++ ++    ++  +  A ++  ++ A+   P+  SY +L+ GL K G+  EA
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEA 204

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + FR +   G  P+ V+YN+++  +C+    +EA EL   M      P+  T+NILI +
Sbjct: 205 YKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK D A ++L  M      P   +Y+ +I+ LCS  +VD     L+ M  R+CKP 
Sbjct: 265 HCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT 324

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T N L   LC  G+++EA  ++ ++ +   S     Y  ++   CR G+T +A +LL 
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M   G  P+  TY++L+ GLC    + EA  +F  M+     P++  + AL+LG C + 
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           + D  L++F  M+  G  P+   Y  L   +        + E+L+E
Sbjct: 445 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 490



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 219/417 (52%), Gaps = 1/417 (0%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + PD+ SY  L++ L K G +  A  L +K+   G   +TV Y SL+ GLCM  + + + 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           +    + ++G  P+  TY+ +++A+ K   +  A  L+  +I  G  P++V+YN ++ GL
Sbjct: 66  ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CK GR EEA+  F ++   G  PN  S+N ++  LC + + ++A ++  EM+  D  P  
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            +Y ILI  LA  GK + A K+   M+     PSA +YN +I  +C    +D  ++    
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M  + C+P+  T+N L    C  GK+ EAF +++ + +  +      Y  +I+ LC   +
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A  LL +M K    P   T ++LI GLC  G I+EA E+   M      PDV  +N 
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           L+ G C++ +T+ + E+   M+ +G  PN  TYT LV G+   + L  +  V  +++
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 227/471 (48%), Gaps = 9/471 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A   +++M+  GH PDVV    ++  LCK+ ++++A+ +   M   G  P+  S+  
Sbjct: 96  LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNT 155

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++  LC++  +  A Q+  +ME    P ++ +Y  L+ GL   G LN++ +   R++  G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSG 215

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+A TY+ ++        +  A++L   + +KG +P+  ++N+L+   CK G+ +EA 
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAF 275

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R  + +   G  P+VV+Y+ L+  LC   R ++A  LL +M      PT+VT N LI  L
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+   A +VLD MV     P   +YN ++   C  G+ +   + L  M  R   PN 
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395

Query: 379 GTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            TY  L + LC   ++ EA  +   +      +P  F Y  +I   C  G+     +L  
Sbjct: 396 VTYTALVSGLCKANRLPEACGVFAQM-KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY----DYKPDVDNFNALLLGL 492
           EM   G +PD   Y +L   LC  G    ALEI     E      +  +V  F   + GL
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGL 512

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             + + +++L   + M+  GQ+P       LV G+    +   +  VL+E+
Sbjct: 513 LDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 207/423 (48%), Gaps = 7/423 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A L    M   G  P+      ++  LC+ +K+ +A +V   M +  I PD+ SY 
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYG 189

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L K G +  A +L  +M D G   + VTYN ++ G+C+   L+++L+    +  K
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+ FT++ L++A  K   +  A +LL  +   G  P++V+Y+ L++GLC   R ++A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                D+  +  +P VV+ N L+  LC  GR +EA E+L  M    +SP +VTYN L+  
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+T+ A ++L +MV     P+  +Y  +++ LC   ++        QM    C PN
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L +  C  G+V     +   +     S     Y  +   LC+ G++ +A ++L 
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489

Query: 437 E----MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           E    +    +  + Y ++  + GL   G +E AL     M      P  +   +L+ GL
Sbjct: 490 EGRESLRSEAWGDEVYRFA--VDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547

Query: 493 CKS 495
           CKS
Sbjct: 548 CKS 550



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 161/313 (51%), Gaps = 1/313 (0%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P+  SY +L+ GL K G+  +A   F+ L   G  P+ V+Y  L+  LCM   +++A EL
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
            A+M+     P+ VTYN++I +    G  + A  ++ +M++    P   +YN ++  LC 
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G+V+  +   ++M    C PN  ++N + + LC   K+ +A  +   +  +        
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I  L + GK  +A++L   M   G TP + TY+ +I G+C+   ++EALE+F  M 
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               +P    FN L+   CK  + D +  + + M + G +P+  TY+ L+ G+     ++
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 535 LSAEVLKELQLRQ 547
            +  +L+++  RQ
Sbjct: 308 DARHLLEDMVKRQ 320



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 139/290 (47%), Gaps = 2/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+++AF  L+RM   GH PDVV  + L+  LC   ++  A  ++E MV     
Sbjct: 263 DAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +   L++ LCK G +  A ++++ M   G   + VTYN+LV G C  G   ++ + 
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++ +GL PN  TY+ L+    K   +  A  +   + + G  PNL +Y  L+ G C 
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI-- 308
            G+ +  ++ F ++   G  P+ V Y  L   LC  GR   A E+L E     RS     
Sbjct: 443 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGD 502

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
             Y   +  L   GK + AL  + +MV+G   P+      ++A LC  G+
Sbjct: 503 EVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 552



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 7/188 (3%)

Query: 369 MFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           M  R   P+  +Y    +GLA     GK+ +A  + Q L +   +     Y  +I  LC 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAK---AGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCM 57

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
                 A +L  +M + G  P   TY+ +I   C  G++EEA ++   M E  + PDV  
Sbjct: 58  ANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N ++ GLCKS R + +L +F  M   G  PN  ++  ++ G+  Q +++ + +V  E++
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 545 LRQVVSES 552
            R +  +S
Sbjct: 178 ARDIPPDS 185


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 244/469 (52%), Gaps = 10/469 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E +V +GH PDVV    L+  LCKA  +++A ++   M S G +P+  +Y+ L+N LCK
Sbjct: 60  FEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCK 119

Query: 146 KGNVGYAMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL--VP 201
            G +  A +L+++M         N +TYNS + GLC      ++ + +  L    L   P
Sbjct: 120 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 179

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  T+S L++   K   +  A  + DD+IA G  PN+++YN L+ GLCK  + E A    
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI-----VTYNILIG 316
             +  KG  P+V++Y++L+ + C   R +EA ELL  M     +P +     VT+NILI 
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G  + A  + +EMV    +P   ++  +I  LC  G+V+     LD M +    P
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TYN L   LC  G+++EA   ++ + +         Y  ++ +LCR  +T  A QL+
Sbjct: 360 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 419

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            E+  +G+ PD+ TY+ L+ GL   G  E+A+ +   M    ++PD   F A   GL +S
Sbjct: 420 SELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRS 479

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
                ++E+ ++++ KG +P+ TT + +++ +    +L+    ++KE +
Sbjct: 480 GNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 246/485 (50%), Gaps = 14/485 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P +V    ++  LCK+N +   +++ E +V  G  PD  +Y  L++ LCK G+
Sbjct: 28  MARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 87

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG--LVPNAFTY 206
           +  A +L   M   G   N VTY+ L+ GLC +G ++++ + +  + +K   ++PN  TY
Sbjct: 88  LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 147

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGK----PNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           +  L+   K+     A +L+  +  + G     P+ V+++ L+ GLCK G+ +EA   F 
Sbjct: 148 NSFLDGLCKQSMTAEACELMRSL--RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           D+ + G+ PNV++YN L+  LC   + E A+ ++  M     +P ++TY++L+ +     
Sbjct: 206 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 265

Query: 323 KTDHALKVLDEMVK-----GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           + D AL++L  M           P   ++N +IA  C  G  +      ++M  +  +P+
Sbjct: 266 RVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 325

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T+  L   LC  G+V+ A  I+  +GN         Y  ++  LC+ G+  +A Q L 
Sbjct: 326 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 385

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G  PDS TY SL+  LC     ++AL++   ++ + + PD   +N L+ GL KS 
Sbjct: 386 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 445

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           +T+ ++ V + M+ KG  P+  T+     G+     L  + E+L+ +  + ++ ++    
Sbjct: 446 KTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCS 505

Query: 557 LVMQY 561
            ++ +
Sbjct: 506 SILDW 510



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 227/451 (50%), Gaps = 11/451 (2%)

Query: 104 LLYDLCKANKMKKAIKVME-MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           +L  LC+A    +A+++    M   G+ P   +Y  ++N LCK  ++G  M+L E++ + 
Sbjct: 7   VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+  + VTYN+L+  LC  G+L ++ +    +  +G VPN  TYS L+    K   +  A
Sbjct: 67  GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126

Query: 223 MKLLDDIIAKGGK--PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF--EPNVVSYNI 278
            +L+ ++  K     PN+++YN  L GLCK+  T EA    R L        P+ V+++ 
Sbjct: 127 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 186

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+  LC  G+ +EA  +  +M  G   P ++TYN L+  L    K + A  +++ MV   
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN-----EGTYNGL-AMLCGVGK 392
             P   +Y+ ++   C   +VD  ++ L  M  R C PN     + T+N L A  C  G 
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            ++A A+ + +  K        +  +I  LC+ G+   A  +L  M   G  P+  TY++
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ GLC  G IEEA +    M      PD   + +L+  LC++ RTD +L++   +   G
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             P+  TY ILV+G+    + E +  VL+E+
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 219/423 (51%), Gaps = 13/423 (3%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVE-KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           + Y  ++  LC+ G+   A+++   +M   G     VTYN+++ GLC   +L   ++  +
Sbjct: 2   ADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFE 61

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            L+++G  P+  TY+ L+++  K   +  A +L  D+ ++G  PN+V+Y+VL+ GLCK G
Sbjct: 62  ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121

Query: 253 RTEEAIRFFRDLPSKGFE--PNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDR-SPTI 308
           R +EA    +++  K  +  PN+++YN  L  LC +    EA EL+  + DG  R SP  
Sbjct: 122 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VT++ LI  L   G+ D A  V D+M+ G + P+  +YN ++  LC   K++     ++ 
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF------YKYVITS 421
           M  +   P+  TY+ L    C   +V EA  ++  + ++   +P         +  +I  
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR-GCTPNVLVPDKVTFNILIAG 300

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            C+ G   QA  L  EM      PD  T+ +LI GLC  G +E A +I  +M      P+
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           V  +NAL+ GLCKS R + + +  + M+  G +P+  TY  LV  +      + + +++ 
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 542 ELQ 544
           EL+
Sbjct: 421 ELK 423



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 205/393 (52%), Gaps = 11/393 (2%)

Query: 171 YNSLVRGLCMLGNLNQSLQ-FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           YN +++ LC  G+  ++L+ F   + + G+ P   TY+ ++    K   + A M+L +++
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           + +G  P++V+YN L+  LCK G  EEA R   D+ S+G  PNVV+Y++L+  LC  GR 
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 290 EEANELLAEM--DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR--PSAAS 345
           +EA EL+ EM     D  P I+TYN  +  L     T  A +++  +  G  R  P   +
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
           ++ +I  LC  G++D      D M      PN  TYN L   LC   K++ A A+I+S+ 
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT-----PDSYTYSSLIRGLCM 459
           +K  +     Y  ++ + C+  +  +A +LL+ M   G T     PD  T++ LI G C 
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G  E+A  +F  M   + +PDV  F AL+ GLCK+ + + + ++  +M   G  PN  T
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           Y  LV G+     +E + + L+E+     V +S
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 180/330 (54%), Gaps = 6/330 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A    + M++ G+ P+V+    L+  LCKA+KM++A  ++E MV  G+ PD  +Y+
Sbjct: 196 QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 255

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT-----VTYNSLVRGLCMLGNLNQSLQFLD 192
            LV+  CK   V  A++L+  M   G   N      VT+N L+ G C  GN  Q+    +
Sbjct: 256 VLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFE 315

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            ++ K L P+  T+  L++   K   V AA  +LD +   G  PN+V+YN L+ GLCK G
Sbjct: 316 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R EEA +F  ++ S G  P+ ++Y  L+ +LC   R ++A +L++E+      P  VTYN
Sbjct: 376 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 435

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           IL+  L   GKT+ A+ VL+EMV    +P + ++    + L   G +   ++ L  +  +
Sbjct: 436 ILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAK 495

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQ 401
              P+  T +  L  +C  GK+ +  A+I+
Sbjct: 496 GMLPDATTCSSILDWVCRSGKLDDVKAMIK 525



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 139/268 (51%), Gaps = 5/268 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL-----CKANKMKKAIKVMEMMV 125
           D   +  ++++A   L  M S+G  P+V+    + +++     CKA   ++A  + E MV
Sbjct: 259 DAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMV 318

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           +  + PD  ++  L++ LCK G V  A  +++ M + G P N VTYN+LV GLC  G + 
Sbjct: 319 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 378

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           ++ QFL+ ++  G VP++ TY  L+ A  +      A++L+ ++ + G  P+ V+YN+L+
Sbjct: 379 EACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILV 438

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            GL K G+TE+AI    ++  KG +P+  ++      L   G      ELL  +      
Sbjct: 439 DGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGML 498

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDE 333
           P   T + ++  +   GK D    ++ E
Sbjct: 499 PDATTCSSILDWVCRSGKLDDVKAMIKE 526


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 262/544 (48%), Gaps = 43/544 (7%)

Query: 44  VLASTQVTISPKDSVYTKPNRKPGNNNDTRHR-------DHKLNDAFLQLERMVSKGHKP 96
           V+     T+SP  S + +       + D R +       + KL+DA      MV     P
Sbjct: 20  VVRGNAATVSPSFSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFP 79

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
            +++ + LL  + K NK    I + E M + GI  +  +Y+ L+NC C++  +  A+ ++
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
            KM   GY  N VT +SL+ G C    +++++  +D++   G  PN  T++ L+   +  
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT---------------------- 254
                AM L+D ++AKG +P+LV+Y V++ GLCK G T                      
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259

Query: 255 -------------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
                        ++A+  F+++ +KG  PNVV+Y+ L+  LC  GRW +A+ LL++M  
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P + T++ LI +    GK   A K+ DEMVK    PS  +Y+ +I   C   ++D 
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
             +  + M  + C P+  TYN L    C   +V+E   + + +  +        Y  +I 
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L + G    A ++  EM   G  P+  TY++L+ GLC  G +E+A+ +F  ++    +P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            +  +N ++ G+CK+ + +   ++F  +  KG  P+   Y  ++ G   +   E +  + 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 541 KELQ 544
           KE++
Sbjct: 560 KEMK 563



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 215/427 (50%), Gaps = 2/427 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +K ++A   ++RMV+KG +PD+V    ++  LCK      A  ++  M    + P    Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +++ LCK  ++  A+ L ++ME  G   N VTY+SL+  LC  G  + + + L  +I+
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           + + P+ FT+S L++A  KE  +  A KL D+++ +   P++V+Y+ L+ G C   R +E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A + F  + SK   P+VV+YN L++  C   R EE  E+  EM         VTYNILI 
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G  D A ++  EMV     P+  +YN ++  LC  GK++  +   + +   + +P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 377 NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
              TYN  +  +C  GKV++ + +  +L  K        Y  +I+  CRKG   +A  L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM + G  P+S  Y++LIR    +G  E + E+   M    +  D      L+  +   
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHD 618

Query: 496 RRTDLSL 502
            R D S 
Sbjct: 619 GRLDKSF 625



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + MV +   P +V  ++L+   C  +++ +A ++ E MVS    
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+   CK   V   M++  +M   G   NTVTYN L++GL   G+ + + + 
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  G+ PN  TY+ LL+   K   +  AM + + +     +P + +YN+++ G+CK
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+    F +L  KG +P+VV+YN ++   C +G  EEA+ L  EM      P    
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YN LI +    G  + + +++ EM    F   A++   ++  +  +G++D
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 622


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 248/508 (48%), Gaps = 36/508 (7%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R  D KL+DA      MV     P +V+ + LL  + K NK    I + E M + GI  +
Sbjct: 56  RLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 115

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +Y+ L+NC C++  +  A+ ++ KM   GY  + VT NSL+ G C    ++ ++  + 
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++++ G  P++FT++ L+   ++      A+ L+D ++ KG +P+LV+Y +++ GLCK G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235

Query: 253 RTE-----------------------------------EAIRFFRDLPSKGFEPNVVSYN 277
             +                                   +A+  F ++ +KG  PNVV+YN
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            L+R LC  GRW +A+ LL++M     +P +VT++ LI +    GK   A K+ DEM+K 
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA 396
              P   +Y+ +I   C   ++D      + M  + C PN  TYN L    C   +V E 
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             + + +  +        Y  +I    +  +   A  +  +M   G  PD  TYS L+ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           LC  G +E AL +F  ++    +PD+  +N ++ G+CK+ + +   ++F  +  KG  PN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQ 544
             TYT ++ G   +   E +  + +E++
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMK 563



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 176/385 (45%), Gaps = 1/385 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ ++     +++    P+   +S LL A  K       + L + +   G   NL +Y++
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C+  +   A+     +   G+EP++V+ N LL   C   R  +A  L+ +M    
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P   T+N LI  L  H +   A+ ++D MV    +P   +Y  ++  LC  G +DL +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
             L +M   + +P    YN +   LC    V +A  +   + NK        Y  +I  L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C  G+   A +LL +M +    P+  T+S+LI     EG + EA +++  M +    PD+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +++L+ G C   R D +  +F++MI K   PN  TY  L++G      ++   E+ +E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 543 LQLRQVVSESAVERLVMQYDFEGIE 567
           +  R +V  +     ++   F+  E
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARE 446



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 137/273 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   L  M+ +   P+VV  + L+    K  K+ +A K+ + M+   I PD  +Y+
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  C    +  A  + E M       N VTYN+L++G C    +++ ++    + Q+
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLV N  TY+ L+   ++ R    A  +   +++ G  P++++Y++LL GLC  G+ E A
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  L     EP++ +YNI++  +C  G+ E+  +L   +      P +VTY  ++  
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
               G  + A  +  EM +    P + +YN +I
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 1/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + M+ +   PD+   ++L+   C  +++ +A  + E+M+S    
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L+   CK   V   M+L  +M   G   NTVTY +L+ G       + +   
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             +++  G++P+  TYS LL+       V  A+ + + +     +P++ +YN+++ G+CK
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+    F  L  KG +PNVV+Y  ++   C +G  EEA+ L  EM      P   T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YN LI +    G    + +++ EM   RF   A++   ++  +  +G++D
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLD 622



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 148/306 (48%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +NDA      M +KG +P+VV   +L+  LC   +   A +++  M+   I P+  +++ 
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++   K+G +  A +L ++M       +  TY+SL+ G CM   L+++    + +I K 
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY+ L++   K + V   M+L  ++  +G   N V+Y  L+ G  +    + A 
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+ + S G  P++++Y+ILL  LC  G+ E A  +   +      P I TYNI+I  +
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK +    +   +     +P+  +Y  +++  C +G  +       +M      P+ 
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571

Query: 379 GTYNGL 384
           GTYN L
Sbjct: 572 GTYNTL 577



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 69/149 (46%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  A +  E +     +PD+     ++  +CKA K++    +   +   G+ P+  +YT
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  C+KG    A  L  +M++ G   ++ TYN+L+R     G+   S + +  +   
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
             V +A T   +    +  R   + +K+L
Sbjct: 601 RFVGDASTIGLVTNMLHDGRLDKSFLKML 629


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 228/467 (48%), Gaps = 1/467 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++A     RM+ K   P  V    LL  + K       + +   M S GI PD  +   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LC    V +A   + K+   G+  +  T+ +L+RGLC+ G + ++L   D++I +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K     AA++LL  +     +PN+V ++ L+  LCK+ +  EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG  PN+V+YN L+  LC    W+    L+ EM      P + T N ++ +L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A  V+D M+     P+  +YN ++   C   +VD+ VK  D M H+ C  N 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +YN L    C +  V +A  + + +  ++ +     Y  +I  LC  G+   A  L +E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TY +L   LC    +++A+ +   +E  ++ PD+  +  +L G+C++  
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + + ++F  +  KG  PN  TY I++ G+  Q  L  ++++  E+ 
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 238/471 (50%), Gaps = 2/471 (0%)

Query: 78  KLNDAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           K +   L L R M S G  PDV     ++  LC  N++  A   +  ++  G  PDA+++
Sbjct: 84  KHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTF 143

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+  LC +G +G A+ L +KM   G+  N VTY +L+ GLC +GN + +++ L  + Q
Sbjct: 144 TTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 203

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
               PN   +S L+++  K+R V  A  +  ++I KG  PN+V+YN L+ GLCK    + 
Sbjct: 204 GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 263

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
                 ++      P+V + N ++ +LC EG   EA++++  M      P +VTYN L+ 
Sbjct: 264 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 323

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A+KV D MV      +  SYN +I   C    VD  +   ++M  +   P
Sbjct: 324 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 383

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TYN L   LC VG++Q+A ++   +  +        Y+ +   LC+     +A  LL
Sbjct: 384 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 443

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             +    + PD   Y++++ G+C  G +E+A ++F  +     +P+V  +N ++ GLCK 
Sbjct: 444 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 503

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
                + ++F  M + G  PN+ TY ++  G    +E   + E+L+E+  R
Sbjct: 504 GLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 230/463 (49%), Gaps = 2/463 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++ AF  L +++  GH+PD    T L+  LC   K+ +A+ + + M+  G  P+  +Y
Sbjct: 119 NRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTY 178

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N LCK GN   A++L+  ME      N V +++L+  LC    + ++      +I 
Sbjct: 179 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT 238

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ PN  TY+ L+    K         L+++++     P++ + N ++  LCKEG   E
Sbjct: 239 KGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAE 298

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      +  +G EPNVV+YN L+   C+    + A ++   M   D    +++YN LI 
Sbjct: 299 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 358

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                   D A+ + +EM +    P+  +YN +I  LC  G++   +    +M  R   P
Sbjct: 359 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 418

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY  L+  LC    + +A A+++++         + Y  ++  +CR G+   A  L 
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             ++  G  P+ +TY+ +I GLC +GL+ EA ++F  M +    P+   +N +  G  ++
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
                ++E+ + M+ +G   + +T T+LV G+   D L+ S +
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDGLDQSVK 580



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 213/433 (49%), Gaps = 1/433 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N + +A+     M+     P    +  L+  + K  +    + L  +M+ +G P +  T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
             ++  LC L  ++ +   L ++++ G  P+A T++ L+     E  +  A+ L D +I 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G +PN+V+Y  L+ GLCK G T  AIR  R +     +PNVV ++ L+ SLC + +  E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  + +EM     SP IVTYN LI  L    +  H   +++EMV  +  P   + N ++ 
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC EG V      +D M HR  +PN  TYN L    C   +V  A  +  ++ +K   +
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+     +A  L  EM++   TP++ TY++LI GLC  G +++A+ +F
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M      PD+  +  L   LCK+R  D ++ + + +      P+   YT +++G+   
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 531 DELELSAEVLKEL 543
            ELE + ++   L
Sbjct: 469 GELEDARDLFSNL 481



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 189/400 (47%), Gaps = 34/400 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF     M++KG  P++V   +L++ LCK  + K    +M  MV S I+
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +   +V+ LCK+G V  A  +V+ M   G   N VTYN+L+ G C+   ++ +++ 
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ K  V N  +Y+ L+    K + V  AM L +++  +   PN V+YN L+ GLC 
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++AI  F ++ ++G  P++V+Y  L   LC     ++A  LL  ++G +  P I  
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  ++  +   G+ + A  +   +     +P+  +YN +I  LC +G +    K   +M 
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C PN+ TYN                                   +     R  +  +
Sbjct: 518 KNGCSPNDCTYN----------------------------------LITRGFLRNNEALR 543

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
             +LL EM   GF+ D  T + L+  L  +GL +   +I 
Sbjct: 544 TIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 133/286 (46%), Gaps = 35/286 (12%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ M+ +G +P+VV    L+   C  N++  A+KV + MV    + +  SY  L+N  CK
Sbjct: 303 VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 362

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             +V  AM L E+M       NTVTYN+L+ GLC +G L  ++     ++ +G +P+  T
Sbjct: 363 IQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 422

Query: 206 YSFLLEAAYKERGVHAAMKLL-----------------------------------DDII 230
           Y  L +   K R +  AM LL                                    ++ 
Sbjct: 423 YRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLS 482

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           +KG +PN+ +YN+++ GLCK+G   EA + F ++   G  PN  +YN++ R         
Sbjct: 483 SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
              ELL EM     S  + T  +L+G L+  G      ++L + V+
Sbjct: 543 RTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 106/220 (48%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A    E M  +   P+ V    L++ LC   +++ AI +   MV+ G IPD  +Y  
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 425

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L + LCK  ++  AM L++ +E   +  +   Y +++ G+C  G L  +      L  KG
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 485

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L PN +TY+ ++    K+  +  A KL  ++   G  PN  +YN++  G  +       I
Sbjct: 486 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 545

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
               ++ ++GF  +V +  +L+  L  +G  +   ++L +
Sbjct: 546 ELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L DA      + SKG +P+V     +++ LCK   + +A K+   M  +G  P+  
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL-QFLDR 193
           +Y  +     +       ++L+E+M   G+  + V+  +L+ G+     L+QS+ Q L +
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLSDDGLDQSVKQILCK 585

Query: 194 LIQ 196
            +Q
Sbjct: 586 YVQ 588


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 228/467 (48%), Gaps = 1/467 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++A     RM+ K   P  V    LL  + K       + +   M S GI PD  +   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LC    V +A   + K+   G+  +  T+ +L+RGLC+ G + ++L   D++I +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K     AA++LL  +     +PN+V ++ L+  LCK+ +  EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG  PN+V+YN L+  LC    W+    L+ EM      P + T N ++ +L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A  V+D M+     P+  +YN ++   C   +VD+ VK  D M H+ C  N 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +YN L    C +  V +A  + + +  ++ +     Y  +I  LC  G+   A  L +E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TY +L   LC    +++A+ +   +E  ++ PD+  +  +L G+C++  
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + + ++F  +  KG  PN  TY I++ G+  Q  L  ++++  E+ 
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 238/471 (50%), Gaps = 2/471 (0%)

Query: 78  KLNDAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           K +   L L R M S G  PDV     ++  LC  N++  A   +  ++  G  PDA+++
Sbjct: 84  KHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTF 143

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+  LC +G +G A+ L +KM   G+  N VTY +L+ GLC +GN + +++ L  + Q
Sbjct: 144 TTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 203

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
               PN   +S L+++  K+R V  A  +  ++I KG  PN+V+YN L+ GLCK    + 
Sbjct: 204 GNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 263

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
                 ++      P+V + N ++ +LC EG   EA++++  M      P +VTYN L+ 
Sbjct: 264 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 323

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A+KV D MV      +  SYN +I   C    VD  +   ++M  +   P
Sbjct: 324 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 383

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TYN L   LC VG++Q+A ++   +  +        Y+ +   LC+     +A  LL
Sbjct: 384 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 443

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             +    + PD   Y++++ G+C  G +E+A ++F  +     +P+V  +N ++ GLCK 
Sbjct: 444 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 503

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
                + ++F  M + G  PN+ TY ++  G    +E   + E+L+E+  R
Sbjct: 504 GLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 230/463 (49%), Gaps = 2/463 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++ AF  L +++  GH+PD    T L+  LC   K+ +A+ + + M+  G  P+  +Y
Sbjct: 119 NRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTY 178

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N LCK GN   A++L+  ME      N V +++L+  LC    + ++      +I 
Sbjct: 179 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT 238

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ PN  TY+ L+    K         L+++++     P++ + N ++  LCKEG   E
Sbjct: 239 KGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAE 298

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      +  +G EPNVV+YN L+   C+    + A ++   M   D    +++YN LI 
Sbjct: 299 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 358

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                   D A+ + +EM +    P+  +YN +I  LC  G++   +    +M  R   P
Sbjct: 359 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 418

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY  L+  LC    + +A A+++++         + Y  ++  +CR G+   A  L 
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             ++  G  P+ +TY+ +I GLC +GL+ EA ++F  M +    P+   +N +  G  ++
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
                ++E+ + M+ +G   + +T T+LV G+   D L+ S +
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDGLDQSVK 580



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 213/433 (49%), Gaps = 1/433 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N + +A+     M+     P    +  L+  + K  +    + L  +M+ +G P +  T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
             ++  LC L  ++ +   L ++++ G  P+A T++ L+     E  +  A+ L D +I 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G +PN+V+Y  L+ GLCK G T  AIR  R +     +PNVV ++ L+ SLC + +  E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  + +EM     SP IVTYN LI  L    +  H   +++EMV  +  P   + N ++ 
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC EG V      +D M HR  +PN  TYN L    C   +V  A  +  ++ +K   +
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+     +A  L  EM++   TP++ TY++LI GLC  G +++A+ +F
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M      PD+  +  L   LCK+R  D ++ + + +      P+   YT +++G+   
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 531 DELELSAEVLKEL 543
            ELE + ++   L
Sbjct: 469 GELEDARDLFSNL 481



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 189/400 (47%), Gaps = 34/400 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF     M++KG  P++V   +L++ LCK  + K    +M  MV S I+
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +   +V+ LCK+G V  A  +V+ M   G   N VTYN+L+ G C+   ++ +++ 
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ K  V N  +Y+ L+    K + V  AM L +++  +   PN V+YN L+ GLC 
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++AI  F ++ ++G  P++V+Y  L   LC     ++A  LL  ++G +  P I  
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  ++  +   G+ + A  +   +     +P+  +YN +I  LC +G +    K   +M 
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C PN+ TYN                                   +     R  +  +
Sbjct: 518 KNGCSPNDCTYN----------------------------------LITRGFLRNNEALR 543

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
             +LL EM   GF+ D  T + L+  L  +GL +   +I 
Sbjct: 544 TIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 45/360 (12%)

Query: 21  KAYGFYSQI------PNLHSF-SLNKGFIRVLASTQVTISPKDSVYTK--PNRKPGNNN- 70
           +A+  +S++      PN+ ++ SL  G  ++     VT    + V +K  P+    N   
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  + +A   ++ M+ +G +P+VV    L+   C  N++  A+KV + MV    +
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  SY  L+N  CK  +V  AM L E+M       NTVTYN+L+ GLC +G L  ++  
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL------------------------ 226
              ++ +G +P+  TY  L +   K R +  AM LL                        
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467

Query: 227 -----------DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                       ++ +KG +PN+ +YN+++ GLCK+G   EA + F ++   G  PN  +
Sbjct: 468 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 527

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN++ R            ELL EM     S  + T  +L+G L+  G      ++L ++V
Sbjct: 528 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIV 587


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 259/487 (53%), Gaps = 13/487 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D + ++A    + M ++G  PDV+  T+L++  C++ K +KA  +   M+  GI 
Sbjct: 129 DGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIR 188

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D ++ + L++ LCK+G V  A +L+E M   G   + VTY++L++GLCM   ++++ + 
Sbjct: 189 SDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRL 248

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KPNLVSYNVL 244
              + + G  P+A  Y  L++   +   ++ A++L  +++   G      KP L+SY+++
Sbjct: 249 FMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSII 308

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + GLCK+ R +EA   F+++ ++G  P+V+SY  L+   C+ G+WE+A  L  EM     
Sbjct: 309 IDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGI 368

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P + T ++LI  L   GK   A K+L+ +++    P   +   ++  LC + ++    +
Sbjct: 369 QPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQ 428

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ-----NSSPQEF-YKY 417
              +M    C PN  T   L   LC  G ++ A  + +++ +       N  P    Y  
Sbjct: 429 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 488

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  LC+ G+  +A +L  EM   G  PD  +Y+SLI G C  G  ++A  +F  M +  
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            +PDV  F+ L+  LCK  +   + E+ ++MI++G +PN  TYT LV+G+   D +  + 
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 608

Query: 538 EVLKELQ 544
           ++  ++Q
Sbjct: 609 QLFMKMQ 615



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 232/451 (51%), Gaps = 15/451 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D + ++A    + M ++G  PDV+  T L++  C + K +KA  +   M+  GI 
Sbjct: 310 DGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 369

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD ++ + L++ LCKKG V  A +L+E +   G   + VT  +LV+GLCM   ++++ Q 
Sbjct: 370 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQL 429

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KPNLVSYNVL 244
             ++ + G +PN  T + L++   +   +  A++L  ++++         KPN +SY+++
Sbjct: 430 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 489

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + GLCK GR +EA   F+++ + G  P+V+SY  L+   C  G+W++A  L  EM     
Sbjct: 490 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 549

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P + T+++LI  L   GK   A ++L+ M++    P+  +Y  ++  LC   ++    +
Sbjct: 550 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQ 609

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF------YKY 417
              +M    C P+  TY  L   LC  G ++ A  + + + +        F      Y  
Sbjct: 610 LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSI 669

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  LC+ G+  +A +L  EM   G  P+  +Y+SLI G C  G +E+A  +F  M +  
Sbjct: 670 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 729

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
            + +   ++ ++ G CK  + D +L  FQ M
Sbjct: 730 VQLNAVTYSVMIHGFCKEGQIDKAL--FQKM 758



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 254/510 (49%), Gaps = 23/510 (4%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSG--- 128
           +HR  +    F+ ++++   G +PD +    L+  LC+   +  A+++  EM+  +G   
Sbjct: 239 KHRISEATRLFMSMQKL---GCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYG 295

Query: 129 --IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
               P   SY+ +++ LCK      A +L ++M+  G   + ++Y +L+ G C+ G   +
Sbjct: 296 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEK 355

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +    + ++  G+ P+  T S L++   K+  V  A KLL+ +I +G  P++V+   L+ 
Sbjct: 356 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVK 415

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD------ 300
           GLC + R  +A + F  +   G  PNVV+   L++ LC  G  + A EL   M       
Sbjct: 416 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 475

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G +  P  ++Y+I+I  L   G+ D A ++  EM      P   SY  +I   C  GK  
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 535

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                 ++M     +P+  T++ L  MLC  GKV EA  +++ +  +        Y  ++
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM----EE 475
             LC   +  +A QL  +M K G  PD  TY +L++GLC  G I+ ALE+   M     +
Sbjct: 596 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 655

Query: 476 Y--DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           Y  ++KPDV +++ ++ GLCK  R D + E+F+ M   G +PN  +YT L+ G     +L
Sbjct: 656 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 715

Query: 534 ELSAEVLKELQLRQVVSESAVERLVMQYDF 563
           E +  +  E+ + Q V  +AV   VM + F
Sbjct: 716 EDAKHLFNEM-VDQGVQLNAVTYSVMIHGF 744



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 231/456 (50%), Gaps = 19/456 (4%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP ++  + ++  LCK  +  +A ++ + M + GI+PD  SYT L++  C  G    A  
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L  +M D G   +  T + L+  LC  G + ++ + L+ +IQ+G +P+  T + L++   
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK------G 268
            +  +  A +L   +   G  PN+V+   L+ GLC+ G  + A+   +++ S        
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +PN +SY+I++  LC  GR +EA EL  EM      P +++Y  LI      GK   A 
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
            + +EMV    +P   +++ +I  LC EGKV    + L+ M  R C PN  TY  L   L
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 598

Query: 388 CGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL----LYEMTK 440
           C   ++ EA   F  +Q LG   +      Y  ++  LC+ G    A +L    L +  +
Sbjct: 599 CMNDRISEATQLFMKMQKLGCLPDVVT---YGTLMKGLCQTGNIKTALELHKKMLSDTGQ 655

Query: 441 YG--FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
           YG  F PD  +YS +I GLC  G  +EA E+F  M+     P+V ++ +L+ G C+S + 
Sbjct: 656 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 715

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           + +  +F  M+++G   N  TY++++ G   + +++
Sbjct: 716 EDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQID 751



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 255/529 (48%), Gaps = 54/529 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K   A      M+  G + DV  ++ L+  LCK  K+ +A +++E+M+  G I D  
Sbjct: 168 RSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV 227

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+  LC K  +  A +L   M+  G   + + Y +L++GLC  GN+N +LQ    +
Sbjct: 228 TYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEM 287

Query: 195 IQKG------LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           +           P   +YS +++   K+R    A +L  ++ A+G  P+++SY  L+ G 
Sbjct: 288 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGF 347

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C  G+ E+A   F ++   G +P+V + ++L+  LC +G+  EAN+LL  +      P +
Sbjct: 348 CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDV 407

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VT   L+  L    +   A ++  +M K    P+  +   ++  LC  G + + ++    
Sbjct: 408 VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKN 467

Query: 369 MFHR------RCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLG-------------- 404
           M          CKPN  +Y+ +   LC  G+  EA   F  +++LG              
Sbjct: 468 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 527

Query: 405 ----NKQNSSPQEF--------------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
                K   +   F              +  +I  LC++GK  +A +LL  M + G  P+
Sbjct: 528 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 587

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           + TY++L++GLCM   I EA ++F+ M++    PDV  +  L+ GLC++     +LE+ +
Sbjct: 588 TVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHK 647

Query: 507 MMI-EKGQ-----MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            M+ + GQ      P+  +Y+I+++G+      + + E+ KE++   V+
Sbjct: 648 KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 696



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 231/469 (49%), Gaps = 15/469 (3%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G +PDV  +  L+   CK  K+ +A +++E+MV  G I D  +Y+ L+  LC K  
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL----QFLDRLIQKGL--VPN 202
           +  A QL   M+  G   + + Y +L++GLC  G +N +L    + L+   Q G+   P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             +YS +++   K+R    A +L  ++ A+G  P+++SY  L+ G C+ G+ E+A   F 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++   G   +V + ++L+  LC EG+  EANELL  M        IVTY+ LI  L    
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR------RCKP 376
           +   A ++   M K   RP A +Y  ++  LC  G ++  ++   +M +       +CKP
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQL 434
              +Y+ +   LC   +  EA  + + +   Q   P    Y  +I   C  GK  +A  L
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEM-KAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM   G  PD  T S LI  LC +G + EA ++  V+ +    PDV     L+ GLC 
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             R   + ++F  M + G MPN  T   L++G+     ++++ E+ K +
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 40/283 (14%)

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G +P+V +  +L+   C EG+  EANELL  M        IVTY+ LI  L    +   A
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR------RCKPNEGTY 381
            ++   M K   RP A +Y  ++  LC  GK+++ +    +M +       +CKP   +Y
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
           +                                   +I  LC+  +  +A +L  EM   
Sbjct: 125 S----------------------------------IIIDGLCKDRREDEARELFKEMKAQ 150

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD  +Y+SLI G C  G  E+A  +F  M +   + DV   + L+  LCK  +   +
Sbjct: 151 GMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEA 210

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            E+ ++MI++G + +  TY+ L++G+  +  +  +  +   +Q
Sbjct: 211 NELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQ 253


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 239/453 (52%), Gaps = 9/453 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD ++N+A   LE M   G  PDV    +++Y LC+ N++ +  K+++ M+  G  P+  
Sbjct: 256 RD-RVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDI 314

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFL-D 192
           +Y  L+N LC+ G V  A  L+ K+     PT N V +  L+ G    G L+++  FL D
Sbjct: 315 TYGVLMNGLCRVGKVDEAQVLLNKV-----PTPNDVHFTILINGYVKSGRLDEANAFLYD 369

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++I+ G  P+ FT++ L+    K+  + +A+ +++D+ A G  PNL++Y  LL G CK+ 
Sbjct: 370 KMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKN 429

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + EEA     ++ +KGFE N++ YN+LLR+LC  G+  +A ++L EM      P I T+N
Sbjct: 430 QLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFN 489

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  L    + + AL +  +M+      +  +YN +I      G +   +K ++ M  R
Sbjct: 490 TLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFR 549

Query: 373 RCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C  +E TYNGL    C +G  ++A  +   +  K           +I  LCR GK   A
Sbjct: 550 GCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNA 609

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL +M   G  PD  TY+SLI GLC  G I EA  +F  ++    +PD   +N L+  
Sbjct: 610 LELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICW 669

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            C++   D +  +    +E   +PN+ T+ ILV
Sbjct: 670 HCRAGMFDDAYLLLLRGVENAFIPNDVTWYILV 702



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 223/479 (46%), Gaps = 34/479 (7%)

Query: 100 QATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           ++ N++ D L  AN    A  V   M+S G+IP   ++  ++  LC    V  A  L+  
Sbjct: 174 KSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRD 233

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M  +G   N+V Y +L+  L     +N++L+ L+ +   G +P+  T++ ++    +   
Sbjct: 234 MTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNR 293

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS------------ 266
           +H   KL+D ++ +G  PN ++Y VL+ GLC+ G+ +EA      +P+            
Sbjct: 294 IHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILING 353

Query: 267 --------------------KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
                                G  P+V ++N L+  LC +G    A +++ +M     +P
Sbjct: 354 YVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTP 413

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            ++TY  L+       + + A  VL+EM    F  +   YN ++  LC  GKV   +  L
Sbjct: 414 NLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDML 473

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            +M  + CKP+  T+N L   LC V + ++A A+ + +      +    Y  +I +  R 
Sbjct: 474 GEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRG 533

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A +L+ +M   G   D  TY+ LI+  C  G  E+AL +F  M   D  P   + 
Sbjct: 534 GAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISC 593

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           N L+ GLC+  +   +LE+ + MI +G  P+  TY  L+ G+     +  +  +  +LQ
Sbjct: 594 NLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQ 652



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 197/419 (47%), Gaps = 33/419 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM------------- 121
           R +++++    ++RM+ +G  P+ +    L+  LC+  K+ +A  ++             
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTI 349

Query: 122 -------------------EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
                              + M+ +G  PD  ++  L++ LCKKG +G A+ +V  M   
Sbjct: 350 LINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN 409

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   N +TY +L+ G C    L ++   L+ +  KG   N   Y+ LL A  K   V  A
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKA 469

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           + +L ++  KG KP++ ++N L+ GLCK  R E+A+  +RD+   G   N V+YN L+ +
Sbjct: 470 LDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHA 529

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
               G  +EA +L+ +M         +TYN LI +    G T+ AL + DEMV+    PS
Sbjct: 530 FLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPS 589

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             S N +I  LC  GKV   ++ L  M HR   P+  TYN L   LC +G ++EAF +  
Sbjct: 590 NISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFN 649

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            L  +        Y  +I   CR G    A+ LL    +  F P+  T+  L+     E
Sbjct: 650 KLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 210/458 (45%), Gaps = 41/458 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   SY  +++ L        A  +  +M   G      T+  +++ LCM+  ++ +   
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + + G VPN+  Y  L+ A  K   V+ A+KLL+++   G  P++ ++N ++ GLC+
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R  E  +    +  +GF PN ++Y +L+  LC  G+ +EA  LL ++     +P  V 
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVH 346

Query: 311 YNILIGSLAYHGKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           + ILI      G+ D A   L D+M+K   RP   ++N +I  LC +G +   V  ++ M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
               C PN  TY  L    C   +++EA  ++  +  K        Y  ++ +LC+ GK 
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLC------------------------------ 458
            +A  +L EM+  G  PD +T+++LI GLC                              
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 459 -----MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
                  G I+EAL++   M       D   +N L+   CK   T+ +L +F  M+ K  
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +P+  +  +L+ G+    ++  + E+L+++  R +  +
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPD 624



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 8/313 (2%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P   SYNV+L  L        A   F ++ SKG  P V ++ +++++LCM    + A  
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           LL +M      P  V Y  LI +L+   + + ALK+L+EM      P   ++N +I  LC
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
              ++    K +D+M  R   PN+ TY G+ M  LC VGKV EA    Q L NK  +   
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITY-GVLMNGLCRVGKVDEA----QVLLNKVPTPND 344

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYE-MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
             +  +I    + G+  +A   LY+ M K G  PD +T+++LI GLC +GL+  A+++  
Sbjct: 345 VHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN 404

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M      P++  +  LL G CK  + + +  V   M  KG   N   Y +L+  +    
Sbjct: 405 DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464

Query: 532 ELELSAEVLKELQ 544
           ++  + ++L E+ 
Sbjct: 465 KVPKALDMLGEMS 477



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 67/133 (50%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + MV K   P  +    L+  LC+  K+  A++++  M+  G+ PD  +Y  L+N LCK
Sbjct: 578 FDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCK 637

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A  L  K++  G   + +TYN+L+   C  G  + +   L R ++   +PN  T
Sbjct: 638 MGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVT 697

Query: 206 YSFLLEAAYKERG 218
           +  L+    KE G
Sbjct: 698 WYILVSNFIKEIG 710



 Score = 39.3 bits (90), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)

Query: 430 QAFQLLYEMTK-YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
           QA ++L +M   Y   P   +Y+ ++  L        A  +F  M      P V  F  +
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVV 214

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           +  LC     D +  + + M + G +PN   Y  L+  ++ +D +  + ++L+E+ L
Sbjct: 215 MKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFL 271


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 244/454 (53%), Gaps = 5/454 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM  +G +P+V   T L+  L +  K++ AI +   M+  G++P+  +Y  L+N LC  G
Sbjct: 328 RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
               A+++   ME +G   NT TYN +++GLC+ G++ +++   +++++ G +P   TY+
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+     +  V+ A +LLD +   G +P+  +YN L++G  K G+ E A  +F+++   
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  PN VSY  L+     +G+ + A  LL  M+    +P + +YN +I  L+   +   A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            K+ D+MV+    P+  +Y  +I  LC  G+     K    M  R+C PN  TY+ L   
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  GK  EA    + +         + Y  +++ LCRKG+ Y+A QL+ +M + GF PD
Sbjct: 628 LCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
              Y SL+   C    ++ AL+IF  +E   ++  +  + AL+  LCK+ + + +  +F 
Sbjct: 684 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 743

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            M+EK    +E  +T+LV+G+  + EL+L  ++L
Sbjct: 744 NMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 777



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/465 (32%), Positives = 234/465 (50%), Gaps = 13/465 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  L+ AF   +RMV +G  P+ V  + L+  LC   ++ +A+ ++E M+  GI P   
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 304

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  +  LC   +   A++LV +M+  G   N  TY +L+ GL  LG L  ++    ++
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++GLVPN  TY+ L+           A+K+   +   G   N  +YN ++ GLC  G  
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 424

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+  F  +   G  P VV+YN L+     +G    A  LL  M      P   TYN L
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  GK + A     EMV+    P+  SY  +I     +GKVD+ +  L +M    C
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK---QNSSPQEF-YKYVITSLCRKGKTYQ 430
            PN  +YN  A++ G+ K +  F+  + + +K   Q   P    Y  +I  LCR G+T  
Sbjct: 545 NPNVESYN--AVINGLSK-ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF++ ++M K    P+ YTYSSLI GLC EG  +EA      M E   +P +D ++ L+ 
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVS 657

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
           GLC+  R   + ++ + M E+G  P+   Y  L+  IAH   LE+
Sbjct: 658 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL--IAHCKNLEV 700



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 241/458 (52%), Gaps = 6/458 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M++ G +P ++    L+  L K  K+++A  ++  +    + PD  +YT L+   C+ 
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            N+  A  + ++M   G   N+VTY++L+ GLC  G ++++L  L+ +I+KG+ P  +TY
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  + A         A++L+  +  +G +PN+ +Y  L++GL + G+ E AI  +  +  
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  PN V+YN L+  LC+ GR+  A ++   M+G        TYN +I  L   G  + 
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-A 385
           A+ + ++M+K    P+  +YN +I    ++G V+   + LD M    C+P+E TYN L +
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 386 MLCGVGKVQEA-FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                GK++ A F   + +    N +P   Y  +I    + GK   A  LL  M + G  
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVS-YTALIDGHSKDGKVDIALSLLKRMEEMGCN 545

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  +Y+++I GL  E    EA +I   M E    P+V  +  L+ GLC++ RT  + ++
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQ---DELELSAEV 539
           F  M ++  +PN  TY+ L+ G+  +   DE E  +E+
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEI 643



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 183 NLNQSLQFLDRLIQ-KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           N+N  +  L+RL++ +   P       +++A   E  +      L++I   G   +L S 
Sbjct: 107 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSC 166

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           N LL  L K    E A   ++ + + G +P+++++N L+  L  +G+  EA  +L+++  
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
            D SP + TY  LI     +   D A  V D MVK    P++ +Y+ +I  LC+EG+VD 
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 362 VVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +  L++M  +  +P   TY   +  LC +   +EA  ++  +  +      + Y  +I+
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L R GK   A  L ++M K G  P++ TY++LI  LC+ G    AL+IF  ME +    
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +   +N ++ GLC     + ++ +F+ M++ G +P   TY  L+ G   +  +  +A +L
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 139/276 (50%), Gaps = 4/276 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D K++ A   L+RM   G  P+V     ++  L K N+  +A K+ + MV  G++
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLL 580

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++ LC+ G   +A ++   ME      N  TY+SL+ GLC  G  +++   
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA--- 637

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            +R+ + G  P   TYS L+    ++   + A +L+ D+  +G  P+   Y  LL   CK
Sbjct: 638 -ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK 696

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
               + A++ F  + +KGF+ ++  Y  L+ +LC  G+ EEA  L   M   + +   + 
Sbjct: 697 NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIV 756

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           + +L+  L   G+ D  +K+L  M    F P+  +Y
Sbjct: 757 WTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 31/334 (9%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N+A   L+ M   G +PD      L+    K  K++ A    + MV  G+ P+  SYT 
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++   K G V  A+ L+++ME+ G   N  +YN+++ GL      +++ +  D+++++G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-------------------------- 232
           L+PN  TY+ L++   +      A K+  D+  +                          
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 638

Query: 233 -----GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
                G +P L +Y+ L++GLC++GR  EA +  +D+  +GF P+   Y  LL + C   
Sbjct: 639 RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNL 698

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
             + A ++   ++       +  Y  LI +L   G+ + A  + D M++  +      + 
Sbjct: 699 EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWT 758

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            ++  L  EG++DL +K L  M  +   PN  TY
Sbjct: 759 VLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 239/466 (51%), Gaps = 1/466 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KLNDA    ++++  G  P  V  T+L++ LC AN    A ++   M   G  P   +Y 
Sbjct: 25  KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 84

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK+G +  A  L++KM + G+  + VTYN+++ GLC    + ++L   + + + 
Sbjct: 85  VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 144

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  +++ ++    ++  +  A ++  ++ AK   P+  SY +L+ GL K G+  EA
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEA 204

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F+ +   G  P+ V+YN+++  +C+    +EA EL   M      P+  T+NILI +
Sbjct: 205 YKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK D A ++L  M      P   +Y+ +I+ LCS  +VD     L+ M  R+CKP 
Sbjct: 265 HCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT 324

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T N L   LC  G+++EA  ++ ++ +   S     Y  ++   CR G+T +A +LL 
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M   G  P+  TY++L+ GLC    + EA  +F  M+     P++  + AL+LG C + 
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           + D  L++F  M+  G  P+   Y  L   +        + E+L+E
Sbjct: 445 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 490



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 218/417 (52%), Gaps = 1/417 (0%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + PD+ SY  L++ L K G +  A  L +K+   G   +TV Y SL+ GLCM  + + + 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           +    + ++G  P+  TY+ +++A+ K   +  A  L+  +I  G  P++V+YN ++ GL
Sbjct: 66  ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CK  R EEA+  F ++   G  PN  S+N ++  LC + + ++A ++  EM+  D  P  
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            +Y ILI  LA  GK + A K+   M+     PSA +YN +I  +C    +D  ++    
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M  + C+P+  T+N L    C  GK+ EAF +++ + +  +      Y  +I+ LC   +
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A  LL +M K    P   T ++LI GLC  G I+EA E+   M      PDV  +N 
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           L+ G C++ +T+ + E+   M+ +G  PN  TYT LV G+   + L  +  V  +++
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 229/471 (48%), Gaps = 9/471 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A   +++M+  GH PDVV    ++  LCK++++++A+ +   M   G  P+  S+  
Sbjct: 96  LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 155

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++  LC++  +  A Q+  +ME    P ++ +Y  L+ GL   G LN++ +   R++  G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG 215

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+A TY+ ++        +  A++L   + +KG +P+  ++N+L+   CK G+ +EA 
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R  + +   G  P+VV+Y+ L+  LC   R ++A  LL +M      PT+VT N LI  L
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+   A +VLD MV     P   +YN ++   C  G+ +   + L  M  R   PN 
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395

Query: 379 GTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            TY  L + LC   ++ EA  +   +      +P  F Y  +I   C  G+     +L  
Sbjct: 396 VTYTALVSGLCKANRLPEACGVFAQM-KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY----DYKPDVDNFNALLLGL 492
           EM   G +PD   Y +L   LC  G    ALEI     E      +  +V  F   + GL
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA--VDGL 512

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            ++ + +++L   + M+  GQ+P       LV G+    +   +  VL+E+
Sbjct: 513 LEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 216/441 (48%), Gaps = 7/441 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ +A L    M   G  P+      ++  LC+ +K+ +A +V   M +  I PD+ 
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++ L K G +  A +L ++M D G   + VTYN ++ G+C+   L+++L+    +
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG  P+ FT++ L++A  K   +  A +LL  +   G  P++V+Y+ L++GLC   R 
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A     D+  +  +P VV+ N L+  LC  GR +EA E+L  M    +SP +VTYN L
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G+T+ A ++L +MV     P+  +Y  +++ LC   ++        QM    C
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TY  L +  C  G+V     +   +     S     Y  +   LC+ G++ +A +
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 486

Query: 434 LLYE----MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +L E    +    +  + Y ++  + GL   G +E AL     M      P  +   +L+
Sbjct: 487 ILREGRESLRSEAWGDEVYRFA--VDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLV 544

Query: 490 LGLCKSRRTDLSLEVFQMMIE 510
            GLCKS +   +  V + +++
Sbjct: 545 AGLCKSGQGGEARAVLEEIMD 565



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 160/313 (51%), Gaps = 1/313 (0%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P+  SY +L+ GL K G+  +A   F+ L   G  P+ V+Y  L+  LCM   +++A EL
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
            A+M+     P+ VTYN++I +    G  + A  ++ +M++    P   +YN ++  LC 
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
             +V+  +   ++M    C PN  ++N + + LC   K+ +A  +   +  K        
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I  L + GK  +A++L   M   G TP + TY+ +I G+C+   ++EALE+F  M 
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               +P    FN L+   CK  + D +  + + M + G +P+  TY+ L+ G+     ++
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 535 LSAEVLKELQLRQ 547
            +  +L+++  RQ
Sbjct: 308 DARHLLEDMVKRQ 320



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 139/290 (47%), Gaps = 2/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  KL++AF  L+RM   GH PDVV  + L+  LC   ++  A  ++E MV     
Sbjct: 263 DAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +   L++ LCK G +  A ++++ M   G   + VTYN+LV G C  G   ++ + 
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++ +GL PN  TY+ L+    K   +  A  +   + + G  PNL +Y  L+ G C 
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI-- 308
            G+ +  ++ F ++   G  P+ V Y  L   LC  GR   A E+L E     RS     
Sbjct: 443 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGD 502

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
             Y   +  L   GK + AL  + +MV+G   P+      ++A LC  G+
Sbjct: 503 EVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 552



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 7/188 (3%)

Query: 369 MFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           M  R   P+  +Y    +GLA     GK+ +A  + Q L +   +     Y  +I  LC 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAK---AGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCM 57

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
                 A +L  +M + G  P   TY+ +I   C  G++EEA ++   M E  + PDV  
Sbjct: 58  ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N ++ GLCKS R + +L +F  M   G  PN  ++  ++ G+  Q +++ + +V  E++
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 545 LRQVVSES 552
            + +  +S
Sbjct: 178 AKDIPPDS 185


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 248/528 (46%), Gaps = 26/528 (4%)

Query: 18  PFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDH 77
           P R  +     IPN  SF  N              S     +++P   P   N       
Sbjct: 4   PTRLRFSVSLSIPNFSSFLQN--------------SSHSHFHSQP---PSIQN------- 39

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            ++DA  Q  RM+   H P ++Q   +L    K      A+ +   +   GI PD  +  
Sbjct: 40  -VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+NC C  G + +   ++ K+   GYP +TVT N+L++GLC+ G + ++L F D+L+ +
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   N  +Y+ L+    K     AA+K L  I  +  KP++V YN ++  +CK     EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEA 218

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F ++  KG   +VV+YN L+   C+ G+ +EA  LL EM     +P + TYNIL+ +
Sbjct: 219 YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   GK   A  VL  M+K   +P   +Y+ ++       +V       + M      P+
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L    C    V EA  + + +  K        Y  +I  LC+ G+    + L+ 
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G   D  TYSSLI GLC  G ++ A+ +F  M++ + +P++  F  LL GLCK  
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           R   + EVFQ ++ KG   N  TY +++ G   Q  LE +  +L +++
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 193/402 (48%), Gaps = 1/402 (0%)

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           NV  A+    +M    +    + +N ++     + + + ++    RL  KG+ P+  T +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+        +     +L  I+ +G  P+ V+ N L+ GLC +G+ ++A+ F   L ++
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF+ N VSY  L+  +C  G    A + L ++DG    P +V YN +I ++  +     A
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEA 218

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
             +  EM          +YN +I   C  GK+   +  L++M  +   PN  TYN L   
Sbjct: 219 YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  GKV+EA +++  +           Y  ++       +  +A  +   M+  G TPD
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            +TY+ LI G C   +++EAL +F  M + +  P +  +++L+ GLCKS R     ++  
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            M ++GQ  +  TY+ L++G+     L+ +  +  +++ +++
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 157/327 (48%), Gaps = 1/327 (0%)

Query: 56  DSVYTKPNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKM 114
           D   TKP+    N   D   +   +++A+     M  KG   DVV    L+Y  C   K+
Sbjct: 191 DGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKL 250

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           K+AI ++  MV   I P+  +Y  LV+ LCK+G V  A  ++  M       + +TY++L
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTL 310

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           + G  ++  + ++    + +   G+ P+  TY+ L+    K + V  A+ L  ++  K  
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P +V+Y+ L+ GLCK GR         ++  +G   +V++Y+ L+  LC  G  + A  
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L  +M   +  P I T+ IL+  L   G+   A +V  +++   +  +  +YN +I   C
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            +G ++  +  L +M    C PN  T+
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTF 517



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 139/265 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L  M+    KPDV+  + L+       ++KKA  V   M   G+ 
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L+N  CK   V  A+ L ++M         VTY+SL+ GLC  G ++     
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +  +G   +  TYS L++   K   +  A+ L + +  +  +PN+ ++ +LL GLCK
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++A   F+DL +KG+  NV +YN+++   C +G  EEA  +L++M+     P   T
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           +  +I +L    + D A K+L +M+
Sbjct: 517 FETIIIALFKKDENDKAEKLLRQMI 541



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 1/315 (0%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P ++ +N +L    K      A+     L  KG +P++++ NIL+   C  G+      +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           LA++      P  VT N LI  L   G+   AL   D+++   F+ +  SY  +I  +C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G     +K L ++  R  KP+   YN +   +C    V EA+ +   +  K  S+    
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I   C  GK  +A  LL EM      P+ YTY+ L+  LC EG ++EA  +  VM 
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +   KPDV  ++ L+ G         +  VF  M   G  P+  TYTIL+ G      ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 535 LSAEVLKELQLRQVV 549
            +  + KE+  + +V
Sbjct: 357 EALNLFKEMHQKNMV 371



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 137/299 (45%), Gaps = 1/299 (0%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +      P ++ +N +L S      +  A  L   ++     P ++T NI
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI    + G+      VL +++K  + P   + N +I  LC +G+V   +   D++  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            + N+ +Y  L   +C +G  + A   ++ +  +        Y  +I ++C+     +A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L  EM   G + D  TY++LI G C+ G ++EA+ +   M      P+V  +N L+  L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           CK  +   +  V  +M++    P+  TY+ L++G     E++ +  V   + L  V  +
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 81/148 (54%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ M  +G   DV+  ++L+  LCK   + +AI +   M    I P+  ++T L++ LCK
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A ++ + +   GY  N  TYN ++ G C  G L ++L  L ++   G +PNAFT
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           +  ++ A +K+     A KLL  +IA+G
Sbjct: 517 FETIIIALFKKDENDKAEKLLRQMIARG 544



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 97/195 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A    + M  K   P +V  ++L+  LCK+ ++     +++ M   G   D  
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVI 410

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++ LCK G++  A+ L  KM+D     N  T+  L+ GLC  G L  + +    L
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG   N +TY+ ++    K+  +  A+ +L  +   G  PN  ++  ++  L K+   
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 255 EEAIRFFRDLPSKGF 269
           ++A +  R + ++G 
Sbjct: 531 DKAEKLLRQMIARGL 545



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 68/126 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A     +M  +  +P++   T LL  LCK  ++K A +V + +++ G   +  
Sbjct: 421 KNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N  CK+G +  A+ ++ KMED G   N  T+ +++  L      +++ + L ++
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540

Query: 195 IQKGLV 200
           I +GL+
Sbjct: 541 IARGLL 546


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 243/457 (53%), Gaps = 6/457 (1%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           ++++++A   LE M     +PDV    ++++ LC+A ++ +A K+++ M+  G   DA +
Sbjct: 253 NNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALT 312

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL-DRL 194
           Y YL++ LC+ G V  A  L+ K+ +     NTV YN+L+ G    G   ++   L + +
Sbjct: 313 YGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNM 368

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  P+A+T++ +++   K+  + +A++LL++++AK  +PN+++Y +L+ G CK+GR 
Sbjct: 369 VIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRL 428

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA      + +KG   N V YN L+ +LC +G  EEA +L  EM G    P I T+N L
Sbjct: 429 EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSL 488

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L  + K + AL +  +M       +  +YN ++        +    K +D+M  R C
Sbjct: 489 INGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGC 548

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TYNGL   LC  G V++   + + +  K           +I+ LCR GK   A +
Sbjct: 549 PLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALK 608

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L +M   G TPD  TY+SLI GLC  G ++EA  +F  ++    +PD   +N L+   C
Sbjct: 609 FLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHC 668

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
                + +  +    ++ G +PNE T++IL+  I  +
Sbjct: 669 HEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 233/458 (50%), Gaps = 6/458 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+S+G  P V     ++  LC  +++  A  ++  M   G +P++  Y  L++ LC+   
Sbjct: 196 MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNR 255

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A+QL+E M       +  T+N ++ GLC  G ++++ + LDR++ +G   +A TY +
Sbjct: 256 VSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF-FRDLPSK 267
           L+    +   V  A  LL+ I      PN V YN L++G    GR EEA    + ++   
Sbjct: 316 LMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIA 371

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G+EP+  ++NI++  L  +G    A ELL EM      P ++TY ILI      G+ + A
Sbjct: 372 GYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEA 431

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            ++++ M       +   YN +I  LC +G ++  ++   +M  + CKP+  T+N L   
Sbjct: 432 AEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLING 491

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC   K++EA ++   +  +   +    Y  ++ +   +    QAF+L+ EM   G   D
Sbjct: 492 LCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLD 551

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           + TY+ LI+ LC  G +E+ L +F  M      P + + N L+ GLC++ + + +L+  Q
Sbjct: 552 NITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQ 611

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            MI +G  P+  TY  L+ G+     ++ ++ +  +LQ
Sbjct: 612 DMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQ 649



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 205/421 (48%), Gaps = 36/421 (8%)

Query: 70  NDTRH---RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM--- 123
           ND  H   R  ++++A   L+RM+ +G   D +    L++ LC+  ++ +A  ++     
Sbjct: 279 NDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN 338

Query: 124 -----------------------------MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
                                        MV +G  PDA ++  +++ L KKG +  A++
Sbjct: 339 PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALE 398

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L+ +M    +  N +TY  L+ G C  G L ++ + ++ +  KGL  N   Y+ L+ A  
Sbjct: 399 LLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALC 458

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K+  +  A++L  ++  KG KP++ ++N L+ GLCK  + EEA+  + D+  +G   N V
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTV 518

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YN L+ +  M    ++A +L+ EM         +TYN LI +L   G  +  L + +EM
Sbjct: 519 TYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEM 578

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
           +     P+  S N +I+ LC  GKV+  +K L  M HR   P+  TYN L   LC +G V
Sbjct: 579 LGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHV 638

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           QEA  +   L ++        Y  +I+  C +G    A  LLY+    GF P+  T+S L
Sbjct: 639 QEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSIL 698

Query: 454 I 454
           I
Sbjct: 699 I 699



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 200/417 (47%), Gaps = 39/417 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   SY  +++ L        A  +   M   G      T+  +++ LCM+  ++ +   
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + + G VPN+  Y  L+ A  +   V  A++LL+D+     +P++ ++N ++ GLC+
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA +    +  +GF  + ++Y  L+  LC  G+ +EA  LL ++     +P  V 
Sbjct: 288 AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVL 343

Query: 311 YNILIGSLAYHGKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           YN LI      G+ + A  +L + MV   + P A ++N +I  L  +G +   ++ L++M
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
             +R +PN  TY  L                                  I   C++G+  
Sbjct: 404 VAKRFEPNVITYTIL----------------------------------INGFCKQGRLE 429

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A +++  M+  G + ++  Y+ LI  LC +G IEEAL++F  M     KPD+  FN+L+
Sbjct: 430 EAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLI 489

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            GLCK+ + + +L ++  M  +G + N  TY  LV     +D ++ + +++ E+  R
Sbjct: 490 NGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFR 546



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 166/355 (46%), Gaps = 6/355 (1%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P   +Y+ +L+          A  +  D++++G  P + ++ V++  LC     + A   
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            RD+   G  PN V Y  L+ +LC   R  EA +LL +M      P + T+N +I  L  
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+   A K+LD M+   F   A +Y  ++  LC  G+VD     L+++ +    PN   
Sbjct: 288 AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVL 343

Query: 381 YNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEM 438
           YN L +     G+ +EA  ++ +        P  + +  +I  L +KG    A +LL EM
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
               F P+  TY+ LI G C +G +EEA EI   M       +   +N L+  LCK    
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           + +L++F  M  KG  P+  T+  L+ G+    ++E +  +  ++ L  V++ + 
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTV 518



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 35/250 (14%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  + +A      M  KG KPD+    +L+  LCK +KM++A+ +   M   G+I +  
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTV 518

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR------------------ 176
           +Y  LV+    + ++  A +LV++M   G P + +TYN L++                  
Sbjct: 519 TYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEM 578

Query: 177 -----------------GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
                            GLC  G +N +L+FL  +I +GL P+  TY+ L+    K   V
Sbjct: 579 LGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHV 638

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A  L + + ++G +P+ ++YN L++  C EG   +A          GF PN V+++IL
Sbjct: 639 QEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSIL 698

Query: 280 LRSLCMEGRW 289
           +  +  +  W
Sbjct: 699 INYIVKKIPW 708


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 250/506 (49%), Gaps = 36/506 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            D KL+DA      MV     P +V+   LL  + K  K    I + E M    I+    
Sbjct: 62  HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+NC C++  +  A+ L+ KM   GY  + VT +SL+ G C    ++ ++  +D++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  T++ L+   +       A+ L+D ++ +G +PNLV+Y V++ GLCK G T
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 255 -----------------------------------EEAIRFFRDLPSKGFEPNVVSYNIL 279
                                              ++A+  F+++ +KG  PNVV+Y+ L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +  LC  GRW +A++LL++M     +P +VT+N LI +    GK   A K+ D+M+K   
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
            P   +YN ++   C   ++D   +  + M  + C P+  TYN L    C   +V++   
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           + + + ++        Y  +I  L   G    A ++  +M   G  PD  TYS L+ GLC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G +E+ALE+F  M++ + K D+  +  ++ G+CK+ + D   ++F  +  KG  PN  
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541

Query: 519 TYTILVEGIAHQDELELSAEVLKELQ 544
           TY  ++ G+  +  L+ +  +LK+++
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMK 567



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 241/492 (48%), Gaps = 1/492 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++ A   L +M+  G++P +V  ++LL   C   ++  A+ +++ MV  G  PD  
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++ L        A+ LV++M   G   N VTY  +V GLC  G+ + +L  L+++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               +  +   ++ ++++  K R V  A+ L  ++  KG +PN+V+Y+ L++ LC  GR 
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A +   D+  K   PN+V++N L+ +   EG++ EA +L  +M      P I TYN L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +     H + D A ++ + MV     P   +YN +I   C   +V+   +   +M HR  
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TY  L   L   G    A  + + + +         Y  ++  LC  GK  +A +
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M K     D Y Y+++I G+C  G +++  ++F  +     KP+V  +N ++ GLC
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
             R    +  + + M E G +PN  TY  L+       +   SAE+++E++  + V +++
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 611

Query: 554 VERLVMQYDFEG 565
              LV     +G
Sbjct: 612 TIGLVANMLHDG 623



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 167/403 (41%), Gaps = 78/403 (19%)

Query: 218 GVHAAMKLLDDIIAKGGK------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
           G+H  MKL D I   GG       P++V +N LL+ + K  + +  I     +       
Sbjct: 60  GLHD-MKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH 118

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
            + +YNIL+   C   +   A  LL +M      P+IVT + L+    +  +   A+ ++
Sbjct: 119 GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAM- 386
           D+MV+  +RP   ++  +I  L    K    V  +D+M  R C+PN  TY    NGL   
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238

Query: 387 -------------------------------LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
                                          LC    V +A  + + +  K        Y
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298

Query: 416 KYVITSLCRKGKTYQAFQLLY-----------------------------------EMTK 440
             +I+ LC  G+   A QLL                                    +M K
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
               PD +TY+SL+ G CM   +++A ++F  M   D  PDV  +N L+ G CKS+R + 
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             E+F+ M  +G + +  TYT L++G+ H  + + + +V K++
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 149/320 (46%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   L  M+ K   P++V    L+    K  K  +A K+ + M+   I PD  +Y 
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN  C    +  A Q+ E M       + VTYN+L++G C    +    +    +  +
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLV +  TY+ L++  + +     A K+   +++ G  P++++Y++LL GLC  G+ E+A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +     + ++  Y  ++  +C  G+ ++  +L   +      P +VTYN +I  
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L        A  +L +M +    P++ +YN +I     +G      + + +M   R   +
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609

Query: 378 EGTYNGLAMLCGVGKVQEAF 397
             T   +A +   G++ ++F
Sbjct: 610 ASTIGLVANMLHDGRLDKSF 629



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 164/419 (39%), Gaps = 92/419 (21%)

Query: 234 GKPNLVSYNVLLTGLCKEGRT---------------------EEAIRFFRDLPSKGFEPN 272
           G P +   ++ L G+C  GR                      ++AI  F  +      P+
Sbjct: 25  GNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPS 84

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG--------SLAY---- 320
           +V +N LL ++    +++    L  +M   +    + TYNILI         SLA     
Sbjct: 85  IVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLG 144

Query: 321 ----------------------HGK-TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
                                 HGK    A+ ++D+MV+  +RP   ++  +I  L    
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTY----NGLAM--------------------------- 386
           K    V  +D+M  R C+PN  TY    NGL                             
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264

Query: 387 -----LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
                LC    V +A  + + +  K        Y  +I+ LC  G+   A QLL +M + 
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
              P+  T+++LI     EG   EA +++  M +    PD+  +N+L+ G C   R D +
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            ++F+ M+ K   P+  TY  L++G      +E   E+ +E+  R +V ++     ++Q
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 49/293 (16%)

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           R+L  KG  P +   +I L  +C  GR   +         GD       Y  ++ +  + 
Sbjct: 19  RNLQGKG-NPRIAPSSIDLCGMCYWGRAFSSGS-------GD-------YREILRNGLHD 63

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            K D A+ +   MVK R  PS   +N +++ +    K D+V+   ++M  +R +   G Y
Sbjct: 64  MKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM--QRLEIVHGLY 121

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
                                            Y  +I   CR+ +   A  LL +M K 
Sbjct: 122 T--------------------------------YNILINCFCRRSQISLALALLGKMMKL 149

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G+ P   T SSL+ G C    I +A+ +   M E  Y+PD   F  L+ GL    +   +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           + +   M+++G  PN  TY ++V G+  + + +L+  +L +++  ++ ++  +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 250/506 (49%), Gaps = 36/506 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            D KL+DA      MV     P +V+   LL  + K  K    I + E M    I+    
Sbjct: 24  HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 83

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+NC C++  +  A+ L+ KM   GY  + VT +SL+ G C    ++ ++  +D++
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  T++ L+   +       A+ L+D ++ +G +PNLV+Y V++ GLCK G T
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203

Query: 255 -----------------------------------EEAIRFFRDLPSKGFEPNVVSYNIL 279
                                              ++A+  F+++ +KG  PNVV+Y+ L
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +  LC  GRW +A++LL++M     +P +VT+N LI +    GK   A K+ D+M+K   
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
            P   +YN ++   C   ++D   +  + M  + C P+  TYN L    C   +V++   
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           + + + ++        Y  +I  L   G    A ++  +M   G  PD  TYS L+ GLC
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G +E+ALE+F  M++ + K D+  +  ++ G+CK+ + D   ++F  +  KG  PN  
Sbjct: 444 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 503

Query: 519 TYTILVEGIAHQDELELSAEVLKELQ 544
           TY  ++ G+  +  L+ +  +LK+++
Sbjct: 504 TYNTMISGLCSKRLLQEAYALLKKMK 529



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 241/492 (48%), Gaps = 1/492 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++ A   L +M+  G++P +V  ++LL   C   ++  A+ +++ MV  G  PD  
Sbjct: 94  RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 153

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++ L        A+ LV++M   G   N VTY  +V GLC  G+ + +L  L+++
Sbjct: 154 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 213

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               +  +   ++ ++++  K R V  A+ L  ++  KG +PN+V+Y+ L++ LC  GR 
Sbjct: 214 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 273

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A +   D+  K   PN+V++N L+ +   EG++ EA +L  +M      P I TYN L
Sbjct: 274 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 333

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +     H + D A ++ + MV     P   +YN +I   C   +V+   +   +M HR  
Sbjct: 334 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 393

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TY  L   L   G    A  + + + +         Y  ++  LC  GK  +A +
Sbjct: 394 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 453

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M K     D Y Y+++I G+C  G +++  ++F  +     KP+V  +N ++ GLC
Sbjct: 454 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 513

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
             R    +  + + M E G +PN  TY  L+       +   SAE+++E++  + V +++
Sbjct: 514 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 573

Query: 554 VERLVMQYDFEG 565
              LV     +G
Sbjct: 574 TIGLVANMLHDG 585



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 167/403 (41%), Gaps = 78/403 (19%)

Query: 218 GVHAAMKLLDDIIAKGGK------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
           G+H  MKL D I   GG       P++V +N LL+ + K  + +  I     +       
Sbjct: 22  GLHD-MKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH 80

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
            + +YNIL+   C   +   A  LL +M      P+IVT + L+    +  +   A+ ++
Sbjct: 81  GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 140

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAM- 386
           D+MV+  +RP   ++  +I  L    K    V  +D+M  R C+PN  TY    NGL   
Sbjct: 141 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 200

Query: 387 -------------------------------LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
                                          LC    V +A  + + +  K        Y
Sbjct: 201 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260

Query: 416 KYVITSLCRKGKTYQAFQLLY-----------------------------------EMTK 440
             +I+ LC  G+   A QLL                                    +M K
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 320

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
               PD +TY+SL+ G CM   +++A ++F  M   D  PDV  +N L+ G CKS+R + 
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             E+F+ M  +G + +  TYT L++G+ H  + + + +V K++
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 423



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 149/320 (46%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   L  M+ K   P++V    L+    K  K  +A K+ + M+   I PD  +Y 
Sbjct: 272 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 331

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN  C    +  A Q+ E M       + VTYN+L++G C    +    +    +  +
Sbjct: 332 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 391

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLV +  TY+ L++  + +     A K+   +++ G  P++++Y++LL GLC  G+ E+A
Sbjct: 392 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 451

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +     + ++  Y  ++  +C  G+ ++  +L   +      P +VTYN +I  
Sbjct: 452 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 511

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L        A  +L +M +    P++ +YN +I     +G      + + +M   R   +
Sbjct: 512 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 571

Query: 378 EGTYNGLAMLCGVGKVQEAF 397
             T   +A +   G++ ++F
Sbjct: 572 ASTIGLVANMLHDGRLDKSF 591



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 159/389 (40%), Gaps = 72/389 (18%)

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           +L  GL  + + ++AI  F  +      P++V +N LL ++    +++    L  +M   
Sbjct: 18  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 303 DRSPTIVTYNILIG--------SLAY--------------------------HGK-TDHA 327
           +    + TYNILI         SLA                           HGK    A
Sbjct: 77  EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NG 383
           + ++D+MV+  +RP   ++  +I  L    K    V  +D+M  R C+PN  TY    NG
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 196

Query: 384 LAM--------------------------------LCGVGKVQEAFAIIQSLGNKQNSSP 411
           L                                  LC    V +A  + + +  K     
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 256

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I+ LC  G+   A QLL +M +    P+  T+++LI     EG   EA +++ 
Sbjct: 257 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 316

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M +    PD+  +N+L+ G C   R D + ++F+ M+ K   P+  TY  L++G     
Sbjct: 317 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 376

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVMQ 560
            +E   E+ +E+  R +V ++     ++Q
Sbjct: 377 RVEDGTELFREMSHRGLVGDTVTYTTLIQ 405



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 1/283 (0%)

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           + F      Y  +LR+   + + ++A  L   M      P+IV +N L+ ++A   K D 
Sbjct: 6   RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 65

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
            + + ++M +        +YN +I   C   ++ L +  L +M     +P+  T + L  
Sbjct: 66  VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 125

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C   ++ +A A++  +           +  +I  L    K  +A  L+  M + G  P
Sbjct: 126 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 185

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TY  ++ GLC  G  + AL +   ME    + DV  FN ++  LCK R  D +L +F
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 245

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + M  KG  PN  TY+ L+  +        ++++L ++  +++
Sbjct: 246 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 8/223 (3%)

Query: 337 GR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           GR F   +  Y  I+     + K+D  +     M   R  P+   +N L  L  + K+++
Sbjct: 5   GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKL--LSAIAKMKK 62

Query: 396 AFAIIQSLGNKQNSSP--QEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            F ++ SLG K          Y Y  +I   CR+ +   A  LL +M K G+ P   T S
Sbjct: 63  -FDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 121

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SL+ G C    I +A+ +   M E  Y+PD   F  L+ GL    +   ++ +   M+++
Sbjct: 122 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 181

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           G  PN  TY ++V G+  + + +L+  +L +++  ++ ++  +
Sbjct: 182 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 249/506 (49%), Gaps = 38/506 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M  KG  P       +L   C++   + +++V+E M + G   D  +  
Sbjct: 126 RIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCN 185

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++G V  A+ L+ K+  +G   + V+YN++++GLCM        + +D +++ 
Sbjct: 186 LVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRV 245

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T++ L+    +        ++L  +   G  P++  Y  ++ G+CKEG  E A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +PS G +PNVV YN +L+ LC   RW+EA ELL+EM   D     VT+NIL+  
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D  +++L++M+     P   +Y  +I   C EG +D  V  L  M    CKPN
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 378 EGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             +Y   L  LC  G+  +A  ++  +  +Q   P    +  +I  LC+KG   QA +LL
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQM-IQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV------------- 482
            +M   G +PD  +YS++I GL   G  EEALE+  VM      P+              
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 483 ----------DN------------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
                     DN            +NA++  LCK   TD +++ F  M+  G MPNE+TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 521 TILVEGIAHQDELELSAEVLKELQLR 546
           T+L++G+A +   + + E+L EL  R
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 202/380 (53%), Gaps = 1/380 (0%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P N  T+  +VRGLC  G +  +L+ LD +  KG  P    Y  +LEAA +  G   +++
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +L+ + AKG   +  + N++L  +C++G  +EA+   R L   G E ++VSYN +L+ LC
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
           M  RW +  EL+ EM   D +P IVT+N LIG L  +G  +   +VL +M +    P   
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSL 403
            Y  II  +C EG +++  + L++M     KPN   YN  L  LC   + +EA  ++  +
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
             K        +  ++   C+ G   +  +LL +M  +G  PD  TY+++I G C EGLI
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +EA+ +   M     KP+  ++  +L GLC + R   + E+   MI++G  PN  T+  L
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 524 VEGIAHQDELELSAEVLKEL 543
           +  +  +  +E + E+LK++
Sbjct: 468 INFLCKKGLVEQAIELLKQM 487



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 36/333 (10%)

Query: 244 LLTGLCKEGRTE-----------------------------EAIRFFRDLPSKGFEPNVV 274
           L+  LC  GRT                              +     R   +    PN  
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAY 112

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           ++  ++R LC  GR  +A E+L EM     +P    Y++++ +    G   ++++VL+ M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGV 390
                     + N ++  +C +G VD  V  L ++    C+ +  +YN    GL M    
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V+E    +  +    N      +  +I  LCR G   +  ++L +M+++G TPD   Y
Sbjct: 233 GDVEELMDEMVRVDCAPNIVT---FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +++I G+C EG +E A EI   M  Y  KP+V  +N +L GLC + R   + E+   M +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K    ++ T+ ILV+       ++   E+L+++
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 35/229 (15%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A + L+ M S G KP+ V  T +L  LC A +   A ++M  M+  G  P+  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LCKKG V  A++L+++M   G   + ++Y++++ GL   G   ++L+ L+ +
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI------------------------- 229
           + KG+ PN   YS +  A  +E  V+  +++ D+I                         
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 230 ----------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
                     ++ G  PN  +Y +L+ GL  EG  +EA     +L S+G
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 65/148 (43%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K  +A   L  MV+KG  P+ +  +++   L +  ++ K I++ + +  + I 
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIR 563

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            DA  Y  +++ LCK+     A+     M   G   N  TY  L++GL   G   ++ + 
Sbjct: 564 SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           L  L  +G +       F +    +E G
Sbjct: 624 LSELCSRGALRKHLMRHFGISNCTQENG 651


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 248/465 (53%), Gaps = 10/465 (2%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L + R ++  H PD +  T L++ L KA +++ A++V++ MVS+  +PD ++ T +V  L
Sbjct: 25  LGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSL 84

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           C    V  A +LVE+M   G   N +TY++LV GLC    L++++  ++ + ++G  P  
Sbjct: 85  CLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTV 144

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ ++    + R V  A   ++ ++A+G  P++++Y  L+ G CK       +    +
Sbjct: 145 VTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGE 204

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  +GF P++V+Y+ ++  LC  GR  +A ++  EM     +PT +TYN LIG     G 
Sbjct: 205 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGD 261

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+++L +MV  +  P   +Y  +++  C  G++D   +   QM   +  P+  T+  
Sbjct: 262 MDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 321

Query: 384 LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLLYEMTK 440
           L   LCG G++++A  +++ +   +   P   Y Y  V+   C+  +  +A +L+ +   
Sbjct: 322 LVDGLCGEGRMEDALELLEEI--TRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRS 379

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM--EEYDYKPDVDNFNALLLGLCKSRRT 498
            GF P++ TY+ L+ G C  G  ++AL+    +  E       V  +  +L  LC+  RT
Sbjct: 380 RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRT 439

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           D +++ ++ MI++G +P   T+  +V  +    + + + E+L+E+
Sbjct: 440 DDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 484



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 245/471 (52%), Gaps = 6/471 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA   L+ MVS  H PD    T ++  LC  +++  A +++E M+  G+  +A +Y+
Sbjct: 54  RLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYS 113

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV+ LCK   +  A+ LVE M + G     VTYNS++ G C    ++++  F+++++ +
Sbjct: 114 ALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAE 173

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  TY+ L+    K R V   ++LL ++  +G  P++V+Y+ ++ GLCK GR  +A
Sbjct: 174 GCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 233

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F ++      P  ++YN L+   C  G  +EA  LL +M     +P +VTY  L+ +
Sbjct: 234 VDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSA 290

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D A ++  +MV  +  P   ++  ++  LC EG+++  ++ L+++  R C P 
Sbjct: 291 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 350

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN +    C   +V++A  ++    ++        Y  ++   CR G+T QA Q L 
Sbjct: 351 IYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD 410

Query: 437 EM-TKYGFTPDSYT-YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           ++ ++ G  P S   Y+ ++  LC +G  ++A++ +  M +  Y P    F  ++  LCK
Sbjct: 411 QLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 470

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           + +   + E+ + MI+ G  P   T   +V        ++ + E+  EL+L
Sbjct: 471 AHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 521



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 205/414 (49%), Gaps = 5/414 (1%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +  ++  LC+ G + +A+ +  +M D  +P + +TY  LV GL     L  ++Q 
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++    VP+  T + ++++      V  A +L+++++ +G   N ++Y+ L+ GLCK
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R +EA+     +  +G  P VV+YN ++   C   R +EA+  + +M      P I+T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LIG           L++L E+ +  F P   +Y+ +I  LC  G++   V   ++M 
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM- 240

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C P   TYN L    C  G + EA  ++  + + + +     Y  ++++ C+ G+  
Sbjct: 241 --SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A++L  +M     +PD  T++SL+ GLC EG +E+ALE+   +      P +  +N ++
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G CK+ +   + E+      +G +PN  TY ILV G       + + + L +L
Sbjct: 359 DGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL 412



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 200/397 (50%), Gaps = 39/397 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++++A   +E+MV++G  PD++  T L+   CK+  + + ++++  +   G  PD  
Sbjct: 156 RARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIV 215

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++ LCK G +  A+ + E+M     PT  +TYNSL+ G C  G+++++++ L ++
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFEEMS--CAPT-AITYNSLIGGYCRAGDMDEAIRLLGKM 272

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +     P+  TY+ L+ A  K   +  A +L   ++A    P++V++  L+ GLC EGR 
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+    ++  +G  P + +YN ++   C   +  +A EL+A+       P  VTYNIL
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNIL 392

Query: 315 IGSLAYHGKTDHALKVLDEMVK--GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +      G+TD AL+ LD++    G    S A Y  I+  LC +G+ D  V+  ++M  R
Sbjct: 393 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQR 452

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              P   T                                  +  V+ +LC+  +  QA 
Sbjct: 453 GYVPAAAT----------------------------------FATVVFALCKAHQPQQAH 478

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           +LL EM KYG TP   T  +++   C  G+I++A E+
Sbjct: 479 ELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 136/344 (39%), Gaps = 102/344 (29%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHAL----------------------------------KV 330
           +P  + +N++IG L   G+  HAL                                  +V
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCG 389
           L EMV  R  P   +   ++  LC   +VD   + +++M HR    N  TY+ L   LC 
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK---------------------T 428
             ++ EA A+++++  +  +     Y  +IT  CR  +                     T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 429 YQA--------------FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y A               +LL E+T+ GFTPD  TYS++I GLC  G + +A++IF  M 
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241

Query: 475 --------------------------------EYDYKPDVDNFNALLLGLCKSRRTDLSL 502
                                           +    PDV  +  L+   CK  R D + 
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           E+FQ M+     P+  T+T LV+G+  +  +E + E+L+E+  R
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 48/92 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   RD + +DA    E M+ +G+ P       +++ LCKA++ ++A +++E M+  G  
Sbjct: 431 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 490

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           P   +   +V+  C+ G +  A +L  ++  Y
Sbjct: 491 PGPGTCDAVVSAYCRAGMIQKADELASELRLY 522


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 249/506 (49%), Gaps = 38/506 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M  KG  P       +L   C++   + +++V+E M + G   D  +  
Sbjct: 126 RIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCN 185

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++G V  A+ L+ K+  +G   + V+YN++++GLCM        + +D +++ 
Sbjct: 186 LVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRV 245

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T++ L+    +        ++L  +   G  P++  Y  ++ G+CKEG  E A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +PS G +PNVV YN +L+ LC   RW+EA ELL+EM   D     VT+NIL+  
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D  +++L++M+     P   +Y  +I   C EG +D  V  L  M    CKPN
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 378 EGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             +Y   L  LC  G+  +A  ++  +  +Q   P    +  +I  LC+KG   QA +LL
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQM-IQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV------------- 482
            +M   G +PD  +YS++I GL   G  EEALE+  VM      P+              
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 483 ----------DN------------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
                     DN            +NA++  LCK   TD +++ F  M+  G MPNE+TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 521 TILVEGIAHQDELELSAEVLKELQLR 546
           T+L++G+A +   + + E+L EL  R
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 202/380 (53%), Gaps = 1/380 (0%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P N  T+  +VRGLC  G +  +L+ LD +  KG  P    Y  +LEAA +  G   +++
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +L+ + AKG   +  + N++L  +C++G  +EA+   R L   G E ++VSYN +L+ LC
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
           M  RW +  EL+ EM   D +P IVT+N LIG L  +G  +   +VL +M +    P   
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSL 403
            Y  II  +C EG +++  + L++M     KPN   YN  L  LC   + +EA  ++  +
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
             K        +  ++   C+ G   +  +LL +M  +G  PD  TY+++I G C EGLI
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +EA+ +   M     KP+  ++  +L GLC + R   + E+   MI++G  PN  T+  L
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 524 VEGIAHQDELELSAEVLKEL 543
           +  +  +  +E + E+LK++
Sbjct: 468 INFLCKKGLVEQAIELLKQM 487



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 36/333 (10%)

Query: 244 LLTGLCKEGRTE-----------------------------EAIRFFRDLPSKGFEPNVV 274
           L+  LC  GRT                              +     R   +    PN  
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAY 112

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           ++  ++R LC  GR  +A E+L EM     +P    Y++++ +    G   ++++VL+ M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGV 390
                     + N ++  +C +G VD  V  L ++    C+ +  +YN    GL M    
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V+E    +  +    N      +  +I  LCR G   +  ++L +M+++G TPD   Y
Sbjct: 233 GDVEELMDEMVRVDCAPNIVT---FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +++I G+C EG +E A EI   M  Y  KP+V  +N +L GLC + R   + E+   M +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K    ++ T+ ILV+       ++   E+L+++
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 35/229 (15%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A + L+ M S G KP+ V  T +L  LC A +   A ++M  M+  G  P+  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LCKKG V  A++L+++M   G   + ++Y++++ GL   G   ++L+ L+ +
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI------------------------- 229
           + KG+ PN   YS +  A  +E  V+  +++ D+I                         
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 230 ----------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
                     ++ G  PN  +Y +L+ GL  EG  +EA     +L S+G
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 249/506 (49%), Gaps = 38/506 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M  KG  P       +L   C++   + +++V+E M + G   D  +  
Sbjct: 126 RIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCN 185

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++G V  A+ L+ K+  +G   + V+YN++++GLCM        + +D +++ 
Sbjct: 186 LVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRV 245

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T++ L+    +        ++L  +   G  P++  Y  ++ G+CKEG  E A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +PS G +PNVV YN +L+ LC   RW+EA ELL+EM   D     VT+NIL+  
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D  +++L++M+     P   +Y  +I   C EG +D  V  L  M    CKPN
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 378 EGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             +Y   L  LC  G+  +A  ++  +  +Q   P    +  +I  LC+KG   QA +LL
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQM-IQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV------------- 482
            +M   G +PD  +YS++I GL   G  EEALE+  VM      P+              
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 483 ----------DN------------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
                     DN            +NA++  LCK   TD +++ F  M+  G MPNE+TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 521 TILVEGIAHQDELELSAEVLKELQLR 546
           T+L++G+A +   + + E+L EL  R
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 202/380 (53%), Gaps = 1/380 (0%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P N  T+  +VRGLC  G +  +L+ LD +  KG  P    Y  +LEAA +  G   +++
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +L+ + AKG   +  + N++L  +C++G  +EA+   R L   G E ++VSYN +L+ LC
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
           M  RW +  EL+ EM   D +P IVT+N LIG L  +G  +   +VL +M +    P   
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSL 403
            Y  II  +C EG +++  + L++M     KPN   YN  L  LC   + +EA  ++  +
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
             K        +  ++   C+ G   +  +LL +M  +G  PD  TY+++I G C EGLI
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +EA+ +   M     KP+  ++  +L GLC + R   + E+   MI++G  PN  T+  L
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 524 VEGIAHQDELELSAEVLKEL 543
           +  +  +  +E + E+LK++
Sbjct: 468 INFLCKKGLVEQAIELLKQM 487



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 36/333 (10%)

Query: 244 LLTGLCKEGRTE-----------------------------EAIRFFRDLPSKGFEPNVV 274
           L+  LC  GRT                              +     R   +    PN  
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAY 112

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           ++  ++R LC  GR  +A E+L EM     +P    Y++++ +    G   ++++VL+ M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGV 390
                     + N ++  +C +G VD  V  L ++    C+ +  +YN    GL M    
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V+E    +  +    N      +  +I  LCR G   +  ++L +M+++G TPD   Y
Sbjct: 233 GDVEELMDEMVRVDCAPNIVT---FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +++I G+C EG +E A EI   M  Y  KP+V  +N +L GLC + R   + E+   M +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K    ++ T+ ILV+       ++   E+L+++
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 35/229 (15%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A + L+ M S G KP+ V  T +L  LC A +   A ++M  M+  G  P+  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LCKKG V  A++L+++M   G   + ++Y++++ GL   G   ++L+ L+ +
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI------------------------- 229
           + KG+ PN   YS +  A  +E  V+  +++ D+I                         
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 230 ----------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
                     ++ G  PN  +Y +L+ GL  EG  +EA     +L S+G
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 142/431 (32%), Positives = 229/431 (53%), Gaps = 35/431 (8%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  TYN L+  LC  G +  +L  LD ++ +G  P+  TY+ LLEA  K RG   AM+L+
Sbjct: 6   NAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI 65

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           D + A+G  PN V+YNVL+ G+C EG  ++A+   R+LPS G +P+ V+YN +L+ LC  
Sbjct: 66  DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 125

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            RW +A+EL+ EM   +  P   T+N++I SL   G    A+++L++M K     +  +Y
Sbjct: 126 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 185

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN 405
           N II  LC +  VD  +  L +M    CKP+  TYN L   LC   +  +A  ++ ++  
Sbjct: 186 NAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQ 245

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                    +  +I  LC+KG    A ++  +M   G TP+S TYS++I GL     +++
Sbjct: 246 NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 305

Query: 466 ALEIFVVMEEYDYKPDV-----------DN-----------------------FNALLLG 491
           ALE+F  M    + PD            D+                       +NA+LLG
Sbjct: 306 ALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLG 365

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           LC++ +T+ ++++   M+  G MP++ TY IL+EG+A++  L  + E+L +L  R V+  
Sbjct: 366 LCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVN 425

Query: 552 SAVERLVMQYD 562
           S ++   +  D
Sbjct: 426 SLIKSEALLLD 436



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 213/401 (53%), Gaps = 2/401 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M+ +G  PDVV    LL   CK    ++A++++++M + G  P+  +Y 
Sbjct: 22  QVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYN 81

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ +C +G+V  A++L+  +  +G   +TV YN++++GLC       + + +  ++++
Sbjct: 82  VLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRE 141

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T++ ++ +  ++  +  A++LL+ +   G   N+V+YN ++ GLC++   + A
Sbjct: 142 NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGA 201

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     + S G +P++V+YN LL+ LC   RW +A EL+  M      P  VT+N LIG 
Sbjct: 202 MGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGF 261

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G    A++V  +M      P++ +Y+ II+ L    K+D  ++  ++M H+   P+
Sbjct: 262 LCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD 321

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           +  Y  LA  L     ++EA   ++ L +   S     Y  ++  LCR GKT  A  ++ 
Sbjct: 322 K-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMA 380

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            M   G  PD  TY  LI GL  EG + EA E+ + +   D
Sbjct: 381 YMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD 421



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 162/310 (52%), Gaps = 1/310 (0%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +PN  +YN L+  LC+ G+  +A+    D+  +G  P+VV+YNILL + C    + +A E
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L+  M     +P  VTYN+L+  +   G  D AL++L  +     +PS  +YN ++  LC
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE 413
           S  +     + + +M    C PNE T+N +   LC  G +Q+A  +++ +     ++   
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I  LC +     A  LL +M  YG  PD  TY++L++GLC      +A E+   M
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            +    PD   FN L+  LC+      ++EVF+ M +KG  PN  TY+ ++ G+A   +L
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 534 ELSAEVLKEL 543
           + + E+  E+
Sbjct: 304 DQALELFNEM 313



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 4/145 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A      M  KG  PD +    L   L   + +++AI+ +  +  SGI P    Y 
Sbjct: 302 KLDQALELFNEMGHKGFNPDKIYQL-LAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYN 360

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC+ G   +A+ ++  M   G   + +TY  L+ GL   G LN++ + L +L  +
Sbjct: 361 AILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSR 420

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAA 222
            ++ N+   S   EA   ++ +HA+
Sbjct: 421 DVLVNSLIKS---EALLLDQNIHAS 442



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D  + +A   + ++   G  P  V    +L  LC+  K + AI +M  MVSSG +PD  +
Sbjct: 334 DDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLT 393

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           Y  L+  L  +G +  A +L+ K+      +  V  NSL++   +L  L+Q++ 
Sbjct: 394 YVILIEGLAYEGYLNEARELLIKL-----CSRDVLVNSLIKSEALL--LDQNIH 440


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 248/503 (49%), Gaps = 36/503 (7%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            KL+DA      MV     P +++ + LL  + K NK    I + E M + GI  +  +Y+
Sbjct: 675  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+NC C++  +  A+ ++ KM   GY  N VT +SL+ G C    +++++  +D++   
Sbjct: 735  ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT--- 254
            G  PN  T++ L+   +       AM L+D ++AKG +P+LV+Y V++ GLCK G T   
Sbjct: 795  GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 255  --------------------------------EEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                                            ++A+  F+++ +KG  PNVV+Y+ L+  
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 283  LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            LC  GRW +A+ LL++M     +P + T++ LI +    GK   A K+ DEMVK    PS
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974

Query: 343  AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
              +Y+ +I   C   ++D   +  + M  + C P+  TYN L    C   +V+E   + +
Sbjct: 975  IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034

Query: 402  SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
             +  +        Y  +I  L + G    A ++  EM   G  P+  TY++L+ GLC  G
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094

Query: 462  LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
             +E+A+ +F  ++    +P +  +N ++ G+CK+ + +   ++F  +  KG  P+   Y 
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 1154

Query: 522  ILVEGIAHQDELELSAEVLKELQ 544
             ++ G   +   E +  + KE++
Sbjct: 1155 TMISGFCRKGSKEEADALFKEMK 1177



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 229/477 (48%), Gaps = 17/477 (3%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           TR RD KLNDA      MV     P +V    LL  + K  K    I + + M   GI  
Sbjct: 162 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 221

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  ++  ++NC C    V  A+ ++ KM   GY  + VT  SLV G C    ++ ++  +
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           D++++ G  P+   Y+ ++++  K + V+ A     +I  KG +PN+V+Y  L+ GLC  
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            R  +A R   D+  K   PNV++Y+ LL +    G+  EA EL  EM      P IVTY
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           + LI  L  H + D A ++ D MV         SYN +I   C   +V+  +K   +M  
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 461

Query: 372 RRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKG 426
           R    N  TYN    G      V K QE F+ +   G     SP  + Y  ++  LC  G
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG----ISPDIWTYNILLGGLCDNG 517

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  +  +M K     D  TY+++IRG+C  G +EEA  +F  +     KPD+  + 
Sbjct: 518 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 577

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            ++ GLC          ++  M ++G M N+ T   L +G     ++ LSAE++K++
Sbjct: 578 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT---LSDG-----DITLSAELIKKM 626



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 235/474 (49%), Gaps = 7/474 (1%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R  +L  A   L +M+  G++P++V  ++LL   C + ++ +A+ +++ M  +G  P+  
Sbjct: 742  RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 801

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++  L++ L        AM L+++M   G   + VTY  +V GLC  G+ + +   L+++
Sbjct: 802  TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 861

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             Q  L P    Y+ +++   K + +  A+ L  ++  KG +PN+V+Y+ L++ LC  GR 
Sbjct: 862  EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             +A R   D+  +   P+V +++ L+ +   EG+  EA +L  EM      P+IVTY+ L
Sbjct: 922  SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
            I     H + D A ++ + MV     P   +YN +I   C   +V+  ++   +M  R  
Sbjct: 982  INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 1041

Query: 375  KPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              N  TYN    GL         QE F  + S G   N      Y  ++  LC+ GK  +
Sbjct: 1042 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT---YNTLLDGLCKNGKLEK 1098

Query: 431  AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
            A  +   + +    P  YTY+ +I G+C  G +E+  ++F  +     KPDV  +N ++ 
Sbjct: 1099 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 1158

Query: 491  GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            G C+    + +  +F+ M E G +PN   Y  L+       + E SAE++KE++
Sbjct: 1159 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 1212



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 209/406 (51%), Gaps = 1/406 (0%)

Query: 77   HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +K ++A   ++RMV+KG +PD+V    ++  LCK      A  ++  M    + P    Y
Sbjct: 814  NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 873

Query: 137  TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              +++ LCK  ++  A+ L ++ME  G   N VTY+SL+  LC  G  + + + L  +I+
Sbjct: 874  NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 933

Query: 197  KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            + + P+ FT+S L++A  KE  +  A KL D+++ +   P++V+Y+ L+ G C   R +E
Sbjct: 934  RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            A + F  + SK   P+VV+YN L++  C   R EE  E+  EM         VTYNILI 
Sbjct: 994  AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             L   G  D A ++  EMV     P+  +YN ++  LC  GK++  +   + +   + +P
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113

Query: 377  NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
               TYN  +  +C  GKV++ + +  +L  K        Y  +I+  CRKG   +A  L 
Sbjct: 1114 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 1173

Query: 436  YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
             EM + G  P+S  Y++LIR    +G  E + E+   M    +  D
Sbjct: 1174 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 205/434 (47%), Gaps = 34/434 (7%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K+  AI +   MV S   P    +  L++ + K       + L +KME  G   +  T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            ++   C    ++ +L  L ++++ G  P+  T   L+    +   V  A+ L+D ++  
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KP++V+YN ++  LCK  R  +A  FF+++  KG  PNVV+Y  L+  LC   RW +A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL++M     +P ++TY+ L+ +   +GK   A ++ +EMV+    P   +Y+ +I  
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           LC   ++D   +  D M  + C  +  +YN L                            
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTL---------------------------- 439

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                 I   C+  +     +L  EM++ G   ++ TY++LI+G    G +++A E F  
Sbjct: 440 ------INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M+ +   PD+  +N LL GLC +   + +L +F+ M ++    +  TYT ++ G+    +
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553

Query: 533 LELSAEVLKELQLR 546
           +E +  +   L L+
Sbjct: 554 VEEAWSLFCSLSLK 567



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 232/511 (45%), Gaps = 55/511 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  ++NDAF   + +  KG +P+VV  T L+  LC +++   A +++  M+   I 
Sbjct: 301 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 360

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++   K G V  A +L E+M       + VTY+SL+ GLC+   ++++ Q 
Sbjct: 361 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 420

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG + +  +Y+ L+    K + V   MKL  ++  +G   N V+YN L+ G  +
Sbjct: 421 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 480

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A  FF  +   G  P++ +YNILL  LC  G  E+A  +  +M   +    IVT
Sbjct: 481 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 540

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG---KVDLVVKCLD 367
           Y  +I  +   GK + A  +   +     +P   +Y  +++ LC++G   +V+ +   + 
Sbjct: 541 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 600

Query: 368 Q--MFHRRCKPNEGTYNGLAML------CGV----------GKVQEAFAIIQSLGNKQN- 408
           Q  +    C  ++G     A L      CG           G  ++A +++++   K + 
Sbjct: 601 QEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSY 660

Query: 409 --------------------------------SSPQEFYKYVITSLCRKGKTYQAFQLLY 436
                                            S  EF K +++++ +  K      L  
Sbjct: 661 DYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSK-LLSAIAKMNKFDVVISLGE 719

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M   G   + YTYS LI   C    +  AL +   M +  Y+P++   ++LL G C S+
Sbjct: 720 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 779

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           R   ++ +   M   G  PN  T+  L+ G+
Sbjct: 780 RISEAVALVDQMFVTGYQPNTVTFNTLIHGL 810



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/556 (23%), Positives = 229/556 (41%), Gaps = 92/556 (16%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            +L  A +  E M  +    D+V  T ++  +CK  K+++A  +   +   G+ PD  +YT
Sbjct: 518  ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 577

Query: 138  YLVNCLCKK---------------------------GNVGYAMQLVEKMEDYGYPTNTVT 170
             +++ LC K                           G++  + +L++KM   GY  + + 
Sbjct: 578  TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLL- 636

Query: 171  YNSLVRGLCMLG---------------------------NLNQSLQFLDRLIQKGLVPNA 203
               +  G+C                               L+ ++     +++    P+ 
Sbjct: 637  -KDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSI 695

Query: 204  FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
              +S LL A  K       + L + +   G   N  +Y++L+   C+  +   A+     
Sbjct: 696  IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 755

Query: 264  LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
            +   G+EPN+V+ + LL   C   R  EA  L+ +M      P  VT+N LI  L  H K
Sbjct: 756  MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 815

Query: 324  TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
               A+ ++D MV    +P   +Y  ++  LC  G  DL    L++M   + +P    YN 
Sbjct: 816  ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 875

Query: 384  LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            +   LC    + +A  + + +  K        Y  +I+ LC  G+   A +LL +M +  
Sbjct: 876  IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935

Query: 443  FTPDSYT-----------------------------------YSSLIRGLCMEGLIEEAL 467
              PD +T                                   YSSLI G CM   ++EA 
Sbjct: 936  INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 995

Query: 468  EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            ++F  M      PDV  +N L+ G CK +R +  +EVF+ M ++G + N  TY IL++G+
Sbjct: 996  QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 1055

Query: 528  AHQDELELSAEVLKEL 543
                + +++ E+ KE+
Sbjct: 1056 FQAGDCDMAQEIFKEM 1071



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++ KL +A    + MV +   P +V  ++L+   C  +++ +A ++ E MVS    
Sbjct: 948  DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 1007

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            PD  +Y  L+   CK   V   M++  +M   G   NTVTYN L++GL   G+ + + + 
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
               ++  G+ PN  TY+ LL+   K   +  AM + + +     +P + +YN+++ G+CK
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             G+ E+    F +L  KG +P+VV+YN ++   C +G  EEA+ L  EM      P    
Sbjct: 1128 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 1187

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
            YN LI +    G  + + +++ EM    F   A++   ++  +  +G++D
Sbjct: 1188 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 1236



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 1/320 (0%)

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           ++ +  +AI  F D+      P++V +N LL ++    +++    L  +M+       + 
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+NI+I       +   AL +L +M+K  + P   +   ++   C   +V   V  +D+M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                KP+   YN +   LC   +V +AF   + +  K        Y  ++  LC   + 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A +LL +M K   TP+  TYS+L+      G + EA E+F  M      PD+  +++L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + GLC   R D + ++F +M+ KG + +  +Y  L+ G      +E   ++ +E+  R +
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 549 VSESAVERLVMQYDFEGIEV 568
           VS +     ++Q  F+  +V
Sbjct: 465 VSNTVTYNTLIQGFFQAGDV 484


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 249/506 (49%), Gaps = 38/506 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M  KG  P       +L   C++   + +++V+E M + G   D  +  
Sbjct: 126 RIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCN 185

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C++G V  A+ L+ K+  +G   + V+YN++++GLCM        + +D +++ 
Sbjct: 186 LVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRV 245

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T++ L+    +        ++L  +   G  P++  Y  ++ G+CKEG  E A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +PS G +PNVV YN +L+ LC   RW+EA ELL+EM   D     VT+NIL+  
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D  +++L++M+     P   +Y  +I   C EG +D  V  L  M    CKPN
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 378 EGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             +Y   L  LC  G+  +A  ++  +  +Q   P    +  +I  LC+KG   QA +LL
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQM-IQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV------------- 482
            +M   G +PD  +YS++I GL   G  EEALE+  VM      P+              
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 483 ----------DN------------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
                     DN            +NA++  LCK   TD +++ F  M+  G MPNE+TY
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 521 TILVEGIAHQDELELSAEVLKELQLR 546
           T+L++G+A +   + + E+L EL  R
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSR 630



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 202/380 (53%), Gaps = 1/380 (0%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P N  T+  +VRGLC  G +  +L+ LD +  KG  P    Y  +LEAA +  G   +++
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVR 167

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +L+ + AKG   +  + N++L  +C++G  +EA+   R L   G E ++VSYN +L+ LC
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
           M  RW +  EL+ EM   D +P IVT+N LIG L  +G  +   +VL +M +    P   
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSL 403
            Y  II  +C EG +++  + L++M     KPN   YN  L  LC   + +EA  ++  +
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
             K        +  ++   C+ G   +  +LL +M  +G  PD  TY+++I G C EGLI
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +EA+ +   M     KP+  ++  +L GLC + R   + E+   MI++G  PN  T+  L
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 524 VEGIAHQDELELSAEVLKEL 543
           +  +  +  +E + E+LK++
Sbjct: 468 INFLCKKGLVEQAIELLKQM 487



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 36/333 (10%)

Query: 244 LLTGLCKEGRTE-----------------------------EAIRFFRDLPSKGFEPNVV 274
           L+  LC  GRT                              +     R   +    PN  
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAY 112

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           ++  ++R LC  GR  +A E+L EM     +P    Y++++ +    G   ++++VL+ M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGV 390
                     + N ++  +C +G VD  V  L ++    C+ +  +YN    GL M    
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V+E    +  +    N      +  +I  LCR G   +  ++L +M+++G TPD   Y
Sbjct: 233 GDVEELMDEMVRVDCAPNIVT---FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +++I G+C EG +E A EI   M  Y  KP+V  +N +L GLC + R   + E+   M +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K    ++ T+ ILV+       ++   E+L+++
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 35/229 (15%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A + L+ M S G KP+ V  T +L  LC A +   A ++M  M+  G  P+  
Sbjct: 403 KEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPV 462

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LCKKG V  A++L+++M   G   + ++Y++++ GL   G   ++L+ L+ +
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI------------------------- 229
           + KG+ PN   YS +  A  +E  V+  +++ D+I                         
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582

Query: 230 ----------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
                     ++ G  PN  +Y +L+ GL  EG  +EA     +L S+G
Sbjct: 583 DRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 65/148 (43%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K  +A   L  MV+KG  P+ +  +++   L +  ++ K I++ + +  + I 
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIR 563

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            DA  Y  +++ LCK+     A+     M   G   N  TY  L++GL   G   ++ + 
Sbjct: 564 SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           L  L  +G +       F +    +E G
Sbjct: 624 LSELCSRGALRKHLMRHFGISNCTQENG 651


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 238/482 (49%), Gaps = 1/482 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA  Q  RM+   H P ++Q   +L    K      A+ +   +   GI PD  +   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NC C  G + +   ++ K+   GYP +TVT N+L++GLC+ G + ++L F D+L+ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N  +Y  L+    K     AA+KLL  I  +  KPN+V Y+ ++  LCK     EA 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++  KG   +VV+Y+ L+   C+EG+ +EA  LL EM     +P + TYNIL+ +L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A  VL  M+K   +P   +Y+ ++       +V       + M      P+ 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY  L    C    V EA  + + +  K        Y  +I  LC+ G+    + L+ E
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G   +  TYSSLI GLC  G ++ A+ +F  M++   +P+   F  LL GLCK  R
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              + EVFQ ++ KG   N  TY ++++G   Q  LE +  +L +++    + ++    +
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEI 519

Query: 558 VM 559
           ++
Sbjct: 520 II 521



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 1/398 (0%)

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           NV  A+    +M    +    + +N ++     + + + ++    RL  KG+ P+  T +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+        +     +L  I+ +G  P+ V+ N L+ GLC +G+ ++A+ F   L ++
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF+ N VSY  L+  +C  G    A +LL ++DG    P +V Y+ +I +L  +     A
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
             +  EM          +Y+ +I   C EGK+   +  L++M  +   PN  TYN L   
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  GKV+EA +++  +           Y  ++       +  +A  +   M+  G TPD
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            +TY+ LI G C   +++EAL +F  M + +  P +  +++L+ GLCKS R     ++  
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            M ++GQ  N  TY+ L++G+     L+ +  +  +++
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 5/266 (1%)

Query: 112  NKMKK---AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
            N MK    A+ +   +   GI PD  +   L+NC C  G + +   ++ K+   GY  +T
Sbjct: 937  NPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDT 996

Query: 169  VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
            +T+ +L+ GLC+ G +N++L F D+L+ +G   N  +Y  L+    K     AA+KLL  
Sbjct: 997  ITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRK 1056

Query: 229  IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
            I  +  KP++V YN ++  LCK     +A   F ++  KG   +VV+YN L+   C+ G+
Sbjct: 1057 IDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGK 1116

Query: 289  WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT--DHALKVLDEMVKGRFRPSAASY 346
             +EA  LL +M     +P + TYNIL+ +L   GK   D +L +L +M     + +A ++
Sbjct: 1117 LKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTF 1176

Query: 347  NPIIARLCSEGKVDLVVKCLDQMFHR 372
              II+ L  + + D V K L +M  R
Sbjct: 1177 EIIISALFEKDENDKVEKLLHEMIAR 1202



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 131/248 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L  M+    KPDV+  + L+       ++KKA  V   M   G+ 
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L+N  CK   V  A+ L ++M         VTY+SL+ GLC  G +      
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +  +G   N  TYS L++   K   +  A+ L + +  +G +PN  ++ +LL GLCK
Sbjct: 397 IDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCK 456

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++A   F+DL +KG+  NV +YN+++   C +G  EEA  +L++M+     P  VT
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVT 516

Query: 311 YNILIGSL 318
           + I+I +L
Sbjct: 517 FEIIIIAL 524



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 139/310 (44%), Gaps = 35/310 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A+     M  KG   DVV  + L+Y  C   K+K+AI ++  MV   I P+  +Y  
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 139 LVNCLCKKGNV---------------------------GY--------AMQLVEKMEDYG 163
           LV+ LCK+G V                           GY        A  +   M   G
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              +  TY  L+ G C    ++++L     + QK +VP   TYS L++   K   +    
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVW 394

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L+D++  +G   N+++Y+ L+ GLCK G  + AI  F  +  +G  PN  ++ ILL  L
Sbjct: 395 DLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGL 454

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  GR ++A E+  ++        + TYN++I      G  + AL +L +M      P A
Sbjct: 455 CKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDA 514

Query: 344 ASYNPIIARL 353
            ++  II  L
Sbjct: 515 VTFEIIIIAL 524



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 133/251 (52%), Gaps = 2/251 (0%)

Query: 87   ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
             R+  KG +PD+     L+   C   ++     ++  ++  G  PD  ++T L+N LC K
Sbjct: 950  HRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLK 1009

Query: 147  GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            G V  A+   +K+   G+  N V+Y +L+ G+C +G+   +++ L ++  +   P+   Y
Sbjct: 1010 GQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMY 1069

Query: 207  SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
            + +++A  K + V  A  L  ++  KG   ++V+YN L+ G C  G+ +EAI     +  
Sbjct: 1070 NTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVL 1129

Query: 267  KGFEPNVVSYNILLRSLCMEGR--WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            K   PNV +YNIL+ +LC EG+   +E+  +L++M+        VT+ I+I +L    + 
Sbjct: 1130 KTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEN 1189

Query: 325  DHALKVLDEMV 335
            D   K+L EM+
Sbjct: 1190 DKVEKLLHEMI 1200



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 5/255 (1%)

Query: 193  RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            RL  KG+ P+ FT + L+        +     +L  I+ +G  P+ +++  L+ GLC +G
Sbjct: 951  RLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKG 1010

Query: 253  RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
            +  +A+ F   L ++GF+ N VSY  L+  +C  G    A +LL ++DG    P +V YN
Sbjct: 1011 QVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYN 1070

Query: 313  ILIGSLAYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             +I +L  H     A  +  EM VKG       +YN +I   C  GK+   +  L++M  
Sbjct: 1071 TIIDALCKHQLVSKAYGLFFEMNVKG-ISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVL 1129

Query: 372  RRCKPNEGTYNGLA-MLCGVGK--VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
            +   PN  TYN L   LC  GK  + E+ +++  + +    +    ++ +I++L  K + 
Sbjct: 1130 KTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEN 1189

Query: 429  YQAFQLLYEMTKYGF 443
             +  +LL+EM   G 
Sbjct: 1190 DKVEKLLHEMIARGL 1204



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 36/292 (12%)

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            A+     L  KG +P++ + NIL+   C  G+      +LA++      P  +T+  LI 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             L   G+ + AL   D+++   F+ +  SY  +I  +C  G     +K L ++  R  KP
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 377  NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            +   YN                                   +I +LC+     +A+ L +
Sbjct: 1065 DVVMYN----------------------------------TIIDALCKHQLVSKAYGLFF 1090

Query: 437  EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            EM   G + D  TY++LI G C+ G ++EA+ +   M      P+V  +N L+  LCK  
Sbjct: 1091 EMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEG 1150

Query: 497  RT--DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +   D SL +   M + G   N  T+ I++  +  +DE +   ++L E+  R
Sbjct: 1151 KDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIAR 1202



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 116/219 (52%), Gaps = 2/219 (0%)

Query: 83   FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            F  L +++ +G+ PD +  T L+  LC   ++ KA+   + +++ G   +  SY  L+N 
Sbjct: 981  FSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLING 1040

Query: 143  LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            +CK G+   A++L+ K++      + V YN+++  LC    ++++      +  KG+  +
Sbjct: 1041 VCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISAD 1100

Query: 203  AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT--EEAIRF 260
              TY+ L+        +  A+ LL+ ++ K   PN+ +YN+L+  LCKEG+   +E++  
Sbjct: 1101 VVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSM 1160

Query: 261  FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
               +   G + N V++ I++ +L  +   ++  +LL EM
Sbjct: 1161 LSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 103/194 (53%), Gaps = 2/194 (1%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            ++N A    ++++++G + + V    L+  +CK    + AIK++  +      PD   Y 
Sbjct: 1011 QVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYN 1070

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             +++ LCK   V  A  L  +M   G   + VTYN+L+ G C++G L +++  L++++ K
Sbjct: 1071 TIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLK 1130

Query: 198  GLVPNAFTYSFLLEAAYKERG--VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
             + PN  TY+ L++A  KE    +  ++ +L  +   G K N V++ ++++ L ++   +
Sbjct: 1131 TINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEND 1190

Query: 256  EAIRFFRDLPSKGF 269
            +  +   ++ ++G 
Sbjct: 1191 KVEKLLHEMIARGL 1204



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 95/186 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A    + M  K   P +V  ++L+  LCK+ ++     +++ M   G   +  
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVI 410

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++ LCK G++  A+ L  KM+D G   NT T+  L+ GLC  G L  + +    L
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG   N +TY+ +++   K+  +  A+ +L  +   G  P+ V++ +++  L K+   
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDEN 530

Query: 255 EEAIRF 260
              + F
Sbjct: 531 GGNVGF 536



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 36/261 (13%)

Query: 306  PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
            P + T NILI    + G+      +L +++K  + P   ++  +I  LC +G+V+  +  
Sbjct: 959  PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018

Query: 366  LDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             D++  +  + N+ +Y  L                                  I  +C+ 
Sbjct: 1019 HDKLLAQGFQLNQVSYGTL----------------------------------INGVCKI 1044

Query: 426  GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            G T  A +LL ++      PD   Y+++I  LC   L+ +A  +F  M       DV  +
Sbjct: 1045 GDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTY 1104

Query: 486  NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ--DELELSAEVLKEL 543
            N L+ G C   +   ++ +   M+ K   PN  TY ILV+ +  +  D L+ S  +L ++
Sbjct: 1105 NTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKM 1164

Query: 544  QLRQVVSESAVERLVMQYDFE 564
            +     + +    +++   FE
Sbjct: 1165 EDNGCKANAVTFEIIISALFE 1185



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 89   MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
            M  KG   DVV    L+Y  C   K+K+AI ++  MV   I P+  +Y  LV+ LCK+G 
Sbjct: 1092 MNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGK 1151

Query: 149  --VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
              +  ++ ++ KMED G   N VT+  ++  L      ++  + L  +I +GL+
Sbjct: 1152 DLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA    + +++KG+  +V     ++   CK   +++A+ ++  M  +G IPDA ++ 
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFE 518

Query: 138 YLVNCLCKK----GNVGYAMQLVEKMEDYGYPTNTVTY 171
            ++  L KK    GNVG+  ++ E +E     T ++T+
Sbjct: 519 IIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSITF 556


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/381 (36%), Positives = 218/381 (57%), Gaps = 5/381 (1%)

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           LGN + SL  +  L     + +    S L+     E G     + L+ ++ +G  P+++ 
Sbjct: 66  LGNGHVSLSPIHSLTNFEEIESNNNLSKLVRNGELEEG----FRFLESMVYRGDIPDIIP 121

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
              L+ G CK G+T +A R    +   G  P+V++YN+L+  +C  GRW +A +LLA+M 
Sbjct: 122 CTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMV 181

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
               SP++VT+NILI  L   G    A+ VL++M K    P++ SYNP++   C E K++
Sbjct: 182 RRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKME 241

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
             ++ L +M  R C P+  TYN L   LC  GKV  A  ++  L +K  S     Y  VI
Sbjct: 242 RAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVI 301

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             L + GKT QA +LL EM   G  PD  TYSSL+ GL  EG ++EA++ F  +E    K
Sbjct: 302 DGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVK 361

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P+   +NA++LGLCK+R+TD +++    M+++G  P E +YTIL+EG+A++   + + E+
Sbjct: 362 PNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALEL 421

Query: 540 LKELQLRQVVSESAVERLVMQ 560
           L EL LR VV +S+ E++ ++
Sbjct: 422 LNELCLRGVVKKSSAEKVAVR 442



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 197/363 (54%), Gaps = 7/363 (1%)

Query: 45  LASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNL 104
           L +  V++SP  S+      +  NN     R+ +L + F  LE MV +G  PD++  T+L
Sbjct: 66  LGNGHVSLSPIHSLTNFEEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSL 125

Query: 105 LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY 164
           +   CK  K +KA ++ME++  SG +PD  +Y  L++ +C  G    A +L+  M   G 
Sbjct: 126 IRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGC 185

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
             + VT+N L+  LC  G L +++  L+++ + G  PN+ +Y+ LL    KE+ +  A++
Sbjct: 186 SPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIE 245

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
            L  + ++G  P++V+YN LLT LCK+G+ + A+     L SKG  P +++YN ++  L 
Sbjct: 246 YLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 305

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G+ ++A +LL EM      P I+TY+ L+G L+  GK D A+K   ++     +P+A 
Sbjct: 306 KVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAI 365

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFAII 400
           +YN I+  LC   K D  +  L  M  R CKP E +Y     GLA     G  +EA  ++
Sbjct: 366 TYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAY---EGLAKEALELL 422

Query: 401 QSL 403
             L
Sbjct: 423 NEL 425



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 104/194 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+  A   L +M S+G  PD+V    LL  LCK  K+  A++++  + S G  P   
Sbjct: 236 KEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLI 295

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ L K G    A +L+++M   G   + +TY+SLV GL   G ++++++F   L
Sbjct: 296 TYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDL 355

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ PNA TY+ ++    K R    A+  L  ++ +G KP   SY +L+ GL  EG  
Sbjct: 356 EVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLA 415

Query: 255 EEAIRFFRDLPSKG 268
           +EA+    +L  +G
Sbjct: 416 KEALELLNELCLRG 429



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 63/126 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K + A   L+ M +KG KPD++  ++L+  L +  K+ +AIK    +   G+ P+A +Y 
Sbjct: 309 KTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYN 368

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK      A+  +  M   G      +Y  L+ GL   G   ++L+ L+ L  +
Sbjct: 369 AIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLR 428

Query: 198 GLVPNA 203
           G+V  +
Sbjct: 429 GVVKKS 434


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 263/540 (48%), Gaps = 15/540 (2%)

Query: 24  GFYSQIPNLHSF-SLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDH-KLND 81
           GFY  +P+  SF   N   I              S  TK    P NN      +   ++D
Sbjct: 28  GFYLFLPDFPSFLFFNHHHITT------------STCTKKRSLPQNNGGFLSNNSISIDD 75

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A     RM+    +P VV+    L  + K  +    + +   M   G+  +  S   L+N
Sbjct: 76  ALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILIN 135

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
           CLC+  +V +A+ ++ KM   G   + +T+N+L+ G C+ G + +++   + ++++G  P
Sbjct: 136 CLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQP 195

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  +YS ++    K      A++LL  +  KG KPNLV+Y  ++  LCK+    +A+   
Sbjct: 196 DVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLL 255

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++  +G  P+VV+Y+ +L   C  G   EA  L  EM G +  P  VT+ IL+  L   
Sbjct: 256 SEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKE 315

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    A  V + M K    P+A +YN ++   C   ++D   K LD M  + C P   +Y
Sbjct: 316 GMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSY 375

Query: 382 NGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N L    C   ++ EA +++  +  K+ +     Y  ++  LC+ G+  +A  L  EM  
Sbjct: 376 NILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCS 435

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD  TYS+L+ GLC  G ++EAL++   M+E   +PD+  +N L+ G+  + + ++
Sbjct: 436 SGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEV 495

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           + E+F  +   G  P   TYTI+++G+  +   + + E+ ++++    +  S    +++Q
Sbjct: 496 AKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQ 555



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 229/449 (51%), Gaps = 2/449 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M   G +PD +    L+   C   ++K+A+ +   MV  G  PD  SY+ ++N LCK
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN   A+QL+ KME+ G   N V Y +++  LC    +N ++  L  ++ +G+ P+  T
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS +L        ++ A  L ++++ +   PN V++ +L+ GLCKEG   EA   F  + 
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG EPN  +YN L+   C+  + +EA ++L  M     +P + +YNILI       + D
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLD 389

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L EM +    P   +Y+ ++  LC  G+    +    +M      P+  TY+ L 
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  G + EA  +++S+   +       Y  +I  +   GK   A +L  ++   G  
Sbjct: 450 DGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQ 509

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P   TY+ +I+GL  EGL +EA E+F  ME+  + P+  ++N ++ G  +++ +  ++ +
Sbjct: 510 PTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRL 569

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDEL 533
              M+ K    + +T+ +L++ +  +DE+
Sbjct: 570 IDEMVGKRFSADSSTFQMLLD-LESRDEI 597



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 209/419 (49%), Gaps = 3/419 (0%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R  + ++ +A      MV +GH+PDV+  + ++  LCK+     A++++  M   G  P+
Sbjct: 172 RCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPN 231

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +YT +++ LCK   V  AM L+ +M D G P + VTY++++ G C LG+LN++    +
Sbjct: 232 LVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFN 291

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            ++ + ++PN  T++ L++   KE  V  A  + + +  KG +PN  +YN L+ G C   
Sbjct: 292 EMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNN 351

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + +EA +    +  KG  P V SYNIL+   C   R +EA  LL EM   + +P  VTY+
Sbjct: 352 QMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYS 411

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+  L   G+   AL +  EM      P   +Y+ ++  LC  G +D  +K L  M   
Sbjct: 412 TLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQES 471

Query: 373 RCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           + +P+   YN L   M    GK++ A  +   L           Y  +I  L ++G + +
Sbjct: 472 KIEPDIVLYNILIEGMFIA-GKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDE 530

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           A++L  +M   GF P+S +Y+ +I+G         A+ +   M    +  D   F  LL
Sbjct: 531 AYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 185/384 (48%), Gaps = 34/384 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  +NDA   L  MV +G  PDVV  + +L+  C    + +A  +   MV   ++
Sbjct: 240 DSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVM 299

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++T LV+ LCK+G V  A  + E M   G   N  TYN+L+ G C+   ++++ + 
Sbjct: 300 PNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKV 359

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD ++ KG  P   +Y+ L+    K R +  A  LL ++  K   P+ V+Y+ L+ GLC+
Sbjct: 360 LDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQ 419

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR +EA+  F+++ S G  P++++Y+ LL  LC  G  +EA +LL  M      P IV 
Sbjct: 420 VGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNILI  +   GK + A ++  ++     +P+  +Y  +I  L  EG  D   +   +M 
Sbjct: 480 YNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKME 539

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
                PN  +YN                IIQ     Q+SS                    
Sbjct: 540 DDGFLPNSCSYN---------------VIIQGFLQNQDSS-------------------T 565

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLI 454
           A +L+ EM    F+ DS T+  L+
Sbjct: 566 AIRLIDEMVGKRFSADSSTFQMLL 589



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 73/138 (52%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++A   L+ M     +PD+V    L+  +  A K++ A ++   + + GI P   +YT 
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++  L K+G    A +L  KMED G+  N+ +YN +++G     + + +++ +D ++ K 
Sbjct: 518 MIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577

Query: 199 LVPNAFTYSFLLEAAYKE 216
              ++ T+  LL+   ++
Sbjct: 578 FSADSSTFQMLLDLESRD 595


>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
 gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
          Length = 594

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 239/466 (51%), Gaps = 34/466 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL +A   ++ M S+   PD     N++      ++M KA++V+++MV SG +PD  +Y 
Sbjct: 152 KLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYN 211

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++ CLCK+G++  A++L+  M   G P + +TYN+++R +   G  +Q+++F    ++K
Sbjct: 212 MVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRK 271

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   TY+ L+E  +K RG   A+++L+++  +G  P+LV+YN L+   CK+G+ E+A
Sbjct: 272 GTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDA 331

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                +L   G  P+ V+YN LL SL   G W+E +E+L  M    + PT+VT N+LI  
Sbjct: 332 ALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLING 391

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +G  D A+  L++M      P   +YN ++  LC EG VD                 
Sbjct: 392 LCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVD----------------- 434

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                            EAF ++  L +   S     Y  V+  L RKG   +A  L  +
Sbjct: 435 -----------------EAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQ 477

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + G  PD  T+ S+I G C      EA+E    + +  Y+ +   +  L+  LC +++
Sbjct: 478 MMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKK 537

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            DL+++V +MM+      NET Y+ ++  IA     E + E+ ++L
Sbjct: 538 VDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKL 583



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 169/353 (47%), Gaps = 2/353 (0%)

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L +  YK + + A+ +++D + ++   P+      ++ G     R ++A++  + +   
Sbjct: 143 ILQKFCYKGKLMEAS-RVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMS 201

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P++++YN+++  LC +G  E A ELL +M      P ++TYN +I  +  +G  D A
Sbjct: 202 GGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQA 261

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           ++   E ++    P   +Y  +I  +         ++ L++M +  C P+  TYN L  L
Sbjct: 262 VEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINL 321

Query: 388 -CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C  GK ++A  +I +L           Y  ++ SL R+G   +  ++L  M+     P 
Sbjct: 322 TCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPT 381

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             T + LI GLC  GL++ A+     M  Y+  PD+  +N LL  LCK    D + ++  
Sbjct: 382 VVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLH 441

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           ++ +    P   +Y  +++G++ +  ++ +  +  ++    ++ +    R ++
Sbjct: 442 LLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSII 494



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 1/208 (0%)

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPN-EGTYNGLAMLCGVGKVQEAFAIIQSLGN 405
           N I+ + C +GK+    + +D M  R   P+ E   N +       ++ +A  +++ +  
Sbjct: 141 NVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVM 200

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                    Y  VI  LC++G    A +LL +M+  G  PD  TY+++IR +   G  ++
Sbjct: 201 SGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQ 260

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A+E +         P +  +  L+  + K R T  +LEV + M  +G  P+  TY  L+ 
Sbjct: 261 AVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLIN 320

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESA 553
               Q + E +A V+  L    +V ++ 
Sbjct: 321 LTCKQGKFEDAALVIDNLLFHGMVPDAV 348



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 104/270 (38%), Gaps = 36/270 (13%)

Query: 310 TYNILIGSLAYHGK-----------------------------------TDHALKVLDEM 334
           T N+++    Y GK                                    D A++VL  M
Sbjct: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKV 393
           V     P   +YN +I  LC +G ++  ++ L+ M    C P+  TYN  +  +   G  
Sbjct: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            +A    +    K        Y  +I  + +   T  A ++L EM   G  PD  TY+SL
Sbjct: 259 DQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSL 318

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I   C +G  E+A  +   +  +   PD   +N LL  L +    D   E+ ++M    Q
Sbjct: 319 INLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQ 378

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            P   T  +L+ G+     L+ +   L ++
Sbjct: 379 PPTVVTCNVLINGLCKNGLLDSAINFLNQM 408



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 4/157 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++AF  L  +      P ++    +L  L +   M KA+ +   M+ +GIIPD +
Sbjct: 429 KEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDT 488

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  ++   C+      A++ ++ +   GY  N+  Y  LV  LC+   ++ ++Q L+ +
Sbjct: 489 THRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMM 548

Query: 195 IQKGLVPNAFTYSFLL----EAAYKERGVHAAMKLLD 227
           +      N   YS ++     A  KE+      KL++
Sbjct: 549 LSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIE 585



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 35/167 (20%)

Query: 412 QEFYKYVITSLCRKGKTYQ-----------------------------------AFQLLY 436
           +E    ++   C KGK  +                                   A Q+L 
Sbjct: 137 EETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLK 196

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  PD  TY+ +I  LC +G +E A+E+   M      PDV  +NA++  +  + 
Sbjct: 197 IMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNG 256

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             D ++E ++  + KG  P   TYTIL+E +        + EVL+E+
Sbjct: 257 CFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEM 303



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 4/115 (3%)

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  T + +++  C +G + EA  +  +M   +  PD +    ++ G   + R D +++V 
Sbjct: 136 DEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVL 195

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR----QVVSESAVER 556
           ++M+  G +P+  TY +++  +  Q  LE + E+L ++ L      V++ +AV R
Sbjct: 196 KIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIR 250



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 62/126 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R   ++ A     +M+  G  PD     ++++  C++NK  +A++ ++ ++  G  
Sbjct: 460 DGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYE 519

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            ++S Y  LV+ LC    V  A+Q++E M      +N   Y++++  +   G   Q+ + 
Sbjct: 520 VNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADEL 579

Query: 191 LDRLIQ 196
             +LI+
Sbjct: 580 RQKLIE 585


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 145/467 (31%), Positives = 232/467 (49%), Gaps = 1/467 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA  Q  RM+   H P ++Q   +L    K      A+ +   +   GI PD  +   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NC C  G + +   ++ K+   GYP +TVT N+L++GLC+ G + ++L F D+L+ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N  +Y+ L+    K      A+KLL  I  +  KPN+  Y+ ++  LCK     EA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++  KG   +VV+Y+ L+   C+EG+ +EA  LL EM     +P + TYNIL+ +L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A  VL  M+K   +P   +Y+ ++       +V       + M      P+ 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY  L    C    V EA  + + +  K        Y  +I  LC+ G+    + L+ E
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G   D  TYSSLI GLC  G ++ A+ +F  M++ + +P++  F  LL GLCK  R
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              + EVFQ ++ KG   N  TY +++ G   Q  LE +  +L +++
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 194/402 (48%), Gaps = 1/402 (0%)

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           NV  A+    +M    +    + +N ++     + + + ++    RL  KG+ P+  T +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+        +     +L  I+ +G  P+ V+ N L+ GLC +G+ ++A+ F   L ++
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF+ N VSY  L+  +C  G    A +LL ++DG    P +  Y+ +I +L  +     A
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 218

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
             +  EM          +Y+ +I   C EGK+   +  L++M  +   PN  TYN L   
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  GKV+EA +++  +           Y  ++       +  +A  +   M+  G TPD
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            +TY+ LI G C   +++EAL +F  M + +  P +  +++L+ GLCKS R     ++  
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            M ++GQ  +  TY+ L++G+     L+ +  +  +++ +++
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 159/327 (48%), Gaps = 1/327 (0%)

Query: 56  DSVYTKPNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKM 114
           D   TKPN +  +   D   +   +++A+     M  KG   DVV  + L+Y  C   K+
Sbjct: 191 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKL 250

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           K+AI ++  MV   I P+  +Y  LV+ LCK+G V  A  ++  M       + +TY++L
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTL 310

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           + G  ++  + ++    + +   G+ P+  TY+ L+    K + V  A+ L  ++  K  
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P +V+Y+ L+ GLCK GR         ++  +G   +V++Y+ L+  LC  G  + A  
Sbjct: 371 VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L  +M   +  P I T+ IL+  L   G+   A +V  +++   +  +  +YN +I   C
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            +G ++  +  L +M    C PN  T+
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTF 517



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 138/265 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L  M+    KPDV+  + L+       ++KKA  V   M   G+ 
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L+N  CK   V  A+ L ++M         VTY+SL+ GLC  G +      
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +  +G   +  TYS L++   K   +  A+ L + +  +  +PN+ ++ +LL GLCK
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++A   F+DL +KG+  NV +YN+++   C +G  EEA  +L++M+     P   T
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           +  +I +L    + D A K+L +M+
Sbjct: 517 FETIIIALFKKDENDKAEKLLRQMI 541



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 145/315 (46%), Gaps = 1/315 (0%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P ++ +N +L    K      A+     L  KG +P++++ NIL+   C  G+      +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           LA++      P  VT N LI  L   G+   AL   D+++   F+ +  SY  +I  +C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G     +K L ++  R  KPN   Y+ +   LC    V EA+ +   +  K  S+    
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I   C +GK  +A  LL EM      P+ YTY+ L+  LC EG ++EA  +  VM 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +   KPDV  ++ L+ G         +  VF  M   G  P+  TYTIL+ G      ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 535 LSAEVLKELQLRQVV 549
            +  + KE+  + +V
Sbjct: 357 EALNLFKEMHQKNMV 371



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 141/299 (47%), Gaps = 1/299 (0%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +      P ++ +N +L S      +  A  L   ++     P ++T NI
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI    + G+      VL +++K  + P   + N +I  LC +G+V   +   D++  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            + N+ +Y  L   +C +G  + A  +++ +  +      E Y  +I +LC+     +A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L  EMT  G + D  TYS+LI G C+EG ++EA+ +   M      P+V  +N L+  L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           CK  +   +  V  +M++    P+  TY+ L++G     E++ +  V   + L  V  +
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 81/148 (54%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ M  +G   DV+  ++L+  LCK   + +AI +   M    I P+  ++T L++ LCK
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A ++ + +   GY  N  TYN ++ G C  G L ++L  L ++   G +PNAFT
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           +  ++ A +K+     A KLL  +IA+G
Sbjct: 517 FETIIIALFKKDENDKAEKLLRQMIARG 544



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 97/195 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A    + M  K   P +V  ++L+  LCK+ ++     +++ M   G   D  
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVI 410

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++ LCK G++  A+ L  KM+D     N  T+  L+ GLC  G L  + +    L
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG   N +TY+ ++    K+  +  A+ +L  +   G  PN  ++  ++  L K+   
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 255 EEAIRFFRDLPSKGF 269
           ++A +  R + ++G 
Sbjct: 531 DKAEKLLRQMIARGL 545



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 68/126 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A     +M  +  +P++   T LL  LCK  ++K A +V + +++ G   +  
Sbjct: 421 KNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N  CK+G +  A+ ++ KMED G   N  T+ +++  L      +++ + L ++
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540

Query: 195 IQKGLV 200
           I +GL+
Sbjct: 541 IARGLL 546



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 65/157 (41%)

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           +  V +A +    +   +++ P   +  ++ S  +      A  L + +   G  PD  T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
            + LI   C  G I     +   + +  Y PD    N L+ GLC   +   +L     ++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +G   N+ +Y  L+ G+    +   + ++L+++  R
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR 193


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/417 (33%), Positives = 215/417 (51%), Gaps = 8/417 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA    ERM+  G+ PDVV    LL+  CK  ++ +A+K+ +  V  G +PD  +Y 
Sbjct: 25  RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYN 84

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK   +  A +++++M       + VTYNSLV GLC  G ++++      ++ K
Sbjct: 85  ALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---IVDK 141

Query: 198 GLVPNAFTYSFLLEAAYKE-RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           G  PN  TYS L+    +E RGV  A+KL   ++ +G +P + +YN+L+ GL KE R  E
Sbjct: 142 GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNE 201

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F  L   G EP+ ++Y + +  LC  GR E+A  +L +MD     P +V++N +I 
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L    + D A  +L  M      P+A S+N +I   C  GK    +    +M  R  KP
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 321

Query: 377 NEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              TYN    GL      G+++EA  +  ++  K        Y  +I  L + GK   A 
Sbjct: 322 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 381

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +LL  M   G  P+ YTY+SLI GLC    ++EALE+FV M E    PD   +  ++
Sbjct: 382 RLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 229/443 (51%), Gaps = 12/443 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P+ +    LL  LC   +M  A  + E M+ +G  PD  +Y  L++  CK G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+++ +     G+  + VTYN+L+ G C    L+++ + L R++ + LVP+  TY+ 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR-TEEAIRFFRDLPSK 267
           L+    K   V  A  L   I+ KG  PN+++Y+ L++GLC+E R   EA++ F  +  +
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G+EP V +YNIL+  L  E R  EA EL + +      P  +TY + I  L   G+ + A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           L +L +M +    P   S+N +I  LC E +VD     L  M  + C PN  ++N   ++
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN--TLI 295

Query: 388 CG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR---KGKTYQAFQLLYEMTKY 441
           CG    GK ++A    + +  +        Y  ++  LC+   +G+  +A  L   M + 
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD  TYS+LI GL   G +++A  +   ME     P+V  +N+L+ GLC   + D +
Sbjct: 356 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEA 415

Query: 502 LEVFQMMIEKGQMPNETTYTILV 524
           LE+F  M+EKG +P+  TY  ++
Sbjct: 416 LELFVAMVEKGCVPDTITYGTII 438



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/434 (32%), Positives = 224/434 (51%), Gaps = 8/434 (1%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M   G  P+  +Y  L++ LC  G +  A  L E+M   GY  + VTYN+L+ G C +G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+++L+  D  +++G VP+  TY+ L+    K   +  A ++L  ++++   P++V+YN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW-EEANELLAEMDGG 302
           L+ GLCK GR +EA     D   KGF PNV++Y+ L+  LC E R   EA +L   +   
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P + TYNILI  L    + + A ++   +VK    P A +Y   I  LC  G+V+  
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 363 VKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
           +  L  M  + C P+  ++N  +  LC   +V EA  ++  +  K  S     +  +I  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC---MEGLIEEALEIFVVMEEYDY 478
            CR GK  +A     EM K G  P   TY+ L+ GLC    EG I+EA+ +F  M E   
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PDV  ++AL+ GL K+ + D +  +   M  KG +PN  TY  L+ G+   ++++ + E
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 539 VLKELQLRQVVSES 552
           +   +  +  V ++
Sbjct: 418 LFVAMVEKGCVPDT 431



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 152/276 (55%), Gaps = 3/276 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A      ++ +G++P+V     L+  L K +++ +A ++   +V  G+ PDA +YT 
Sbjct: 164 VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 223

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            ++ LCK G V  A+ +++ M++ G   + V++N+++ GLC    ++++   L  +  KG
Sbjct: 224 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK---EGRTE 255
             PNA +++ L+    +      AM    +++ +G KP +V+YN+L+ GLCK   EGR +
Sbjct: 284 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 343

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EAI  F  +  KG  P+VV+Y+ L+  L   G+ ++A  LL  M+     P + TYN LI
Sbjct: 344 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 403

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
             L    K D AL++   MV+    P   +Y  II+
Sbjct: 404 SGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 140/292 (47%), Gaps = 42/292 (14%)

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF PN ++YN LL  LC  GR  +A  L   M     SP +VTYN L+      G+ D A
Sbjct: 5   GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           LK+ D  VK  F P   +YN +I   C   K+D   + L +M      P+  TYN L   
Sbjct: 65  LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSL--- 121

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
                                          +  LC+ G+  +A  L+ +    GF+P+ 
Sbjct: 122 -------------------------------VNGLCKNGRVDEARMLIVDK---GFSPNV 147

Query: 448 YTYSSLIRGLCME-GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            TYS+LI GLC E   + EAL++F  + +  Y+P+V  +N L+ GL K  R + + E+F 
Sbjct: 148 ITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 207

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR----QVVSESAV 554
            +++ G  P+  TYT+ ++G+     +E +  +LK++  +     VVS +AV
Sbjct: 208 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 259



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 136/250 (54%), Gaps = 3/250 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ ++N+AF     +V  G +PD +  T  +  LCKA +++ A+ +++ M   G +
Sbjct: 191 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 250

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  S+  ++N LCK+  V  A  L+  ME  G   N +++N+L+ G C  G   +++  
Sbjct: 251 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 310

Query: 191 LDRLIQKGLVPNAFTYSFLLEA---AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
              ++++G+ P   TY+ L++    A +E  +  A+ L D +I KG  P++V+Y+ L+ G
Sbjct: 311 FKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 370

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           L K G+ ++A R    + +KG  PNV +YN L+  LC   + +EA EL   M      P 
Sbjct: 371 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPD 430

Query: 308 IVTYNILIGS 317
            +TY  +I +
Sbjct: 431 TITYGTIISA 440



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 5/121 (4%)

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M K+GF P+  TY++L+ GLC  G + +A  ++  M +  Y PDV  +N LL G CK   
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
            D +L++F   +++G +P+  TY  L+ G    D+L+ +  +L+     ++VSE+ V  +
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQ-----RMVSENLVPDV 115

Query: 558 V 558
           V
Sbjct: 116 V 116


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 246/480 (51%), Gaps = 16/480 (3%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV---MEMMVSSGIIPDA 133
            K+++A    + +++   + D V ++ L+  LC+  ++ +A ++   MEM       PD 
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT L++  CK GN+  AM+++  ME      N VTY+SL+ GLC  G+L+Q+L    R
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  KG VPN  TY+ L+        V AA  L+D++ A     + VSYN LL G C+ GR
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD-GGDRSPTIVTYN 312
            EEA + F+++ +K   P+ ++Y  L+R  C   R EEA  LL  M       P +VTY+
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I++   +   +   A + + EM+     P+A +Y+ +I  LC  G+V+  ++ L  +   
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD-- 427

Query: 373 RCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
             KP+  TY   +  LCG  + +EA  +++ + NK+       +  VI +LCR G   +A
Sbjct: 428 --KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV-------DN 484
           ++LL  M  +G  P   TY++L+ G    G +E A E+F VM     K            
Sbjct: 486 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQA 545

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F+AL+ GLCK+R  D ++ V + +  +   P E     +V+G+      E + +++  + 
Sbjct: 546 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 605



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 229/448 (51%), Gaps = 11/448 (2%)

Query: 108 LCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY-GYP 165
           LCKA    KA +V+ EM     + PD  +Y+ ++N  CK+G +  A +++ +M    G  
Sbjct: 19  LCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMA 78

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            + VTY S+V GLC  G ++++ + +  +  KG+ P+ FT+S L+      R V  A+KL
Sbjct: 79  PDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKL 138

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK---GFEPNVVSYNILLRS 282
             +I+    + + VS + L+TGLC+E R  EA   F+++  +    ++P+VV+Y  L+  
Sbjct: 139 YKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDG 198

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C  G  E+A ++L  M+G    P +VTY+ L+  L   G  D AL +   M      P+
Sbjct: 199 FCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 258

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
             +Y  +I  LC+  KVD     +D+M    C  +  +YN L    C +G+++EA  + +
Sbjct: 259 VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFK 318

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM-TKYGFTPDSYTYSSLIRGLCME 460
            +  K     +  Y  ++   C   +  +A  LL  M T  G  PD  TYS ++ G    
Sbjct: 319 EMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRA 378

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
               EA E    M   +  P+   +++L+ GLCK+ R + ++EV + +      P+  TY
Sbjct: 379 KRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTY 434

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQV 548
           TI++EG+   D  E +  +L+E+  ++V
Sbjct: 435 TIVIEGLCGTDRTEEALTLLEEMVNKRV 462



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 242/516 (46%), Gaps = 46/516 (8%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLVNCLCKKGNVG 150
           K   PD+V  + ++   CK  +M +A +++ EM+   G+ PD  +YT +V+ LC+ G + 
Sbjct: 39  KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMD 98

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
            A ++V +M+  G   +  T+++L+ G C    ++++L+    ++      +A + S L+
Sbjct: 99  RACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALI 158

Query: 211 EAAYKERGVHAAMKLLDDIIAK---GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
               +ER +  A +L  ++  +     KP++V+Y  L+ G CK G  E+A++    +  +
Sbjct: 159 TGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGR 218

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              PNVV+Y+ LL  LC  G  ++A +L   M      P +VTY  LI  L    K D A
Sbjct: 219 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA 278

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
             ++DEM          SYN ++   C  G+++   +   +M  + C P+  TY  L   
Sbjct: 279 RLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRG 338

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            C   +++EA  +++++       P    Y  V+    R  +  +A + + EM      P
Sbjct: 339 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 398

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           ++ TYSSLI GLC  G +  A+E   V++  D KPDV  +  ++ GLC + RT+ +L + 
Sbjct: 399 NAVTYSSLIDGLCKAGRVNHAME---VLKNVD-KPDVVTYTIVIEGLCGTDRTEEALTLL 454

Query: 506 QMMIEK-----------------------------------GQMPNETTYTILVEGIAHQ 530
           + M+ K                                   G  P   TYT L+EG +  
Sbjct: 455 EEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 514

Query: 531 DELELSAEVLKELQLRQVVSESAVERLVMQYDFEGI 566
             +E++ E+  E+  R+    S+   LV +  F  +
Sbjct: 515 GRMEIAYELF-EVMRRKAKKSSSAANLVPEQAFSAL 549



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 217/433 (50%), Gaps = 7/433 (1%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED-YGYPTNTVTYNSLVRGLCMLGNLNQS 187
           + P+  +Y  +VN LCK      A +++++M D      + VTY++++ G C  G ++++
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 188 LQFLDRLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
            + L  ++ + G+ P+  TY+ +++   ++  +  A +++ ++  KG +P+  +++ L+T
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM---DGGD 303
           G C   + +EA++ ++++ +     + VS + L+  LC E R  EA EL  EM   + G 
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  LI      G  + A+K+L  M   +  P+  +Y+ ++  LC  G +D  +
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
               +M  + C PN  TY  L   LC   KV  A  ++  +      +    Y  ++   
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME-EYDYKPD 481
           CR G+  +A QL  EM      PD  TY+ L+RG C    +EEA  +   M+      PD
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           V  ++ ++ G  +++R   + E  Q MI +   PN  TY+ L++G+     +  + EVLK
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK 424

Query: 542 ELQLRQVVSESAV 554
            +    VV+ + V
Sbjct: 425 NVDKPDVVTYTIV 437



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 193/409 (47%), Gaps = 48/409 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  A   L  M  +   P+VV  ++LL+ LCKA  + +A+ +   M S G +P+  +YT 
Sbjct: 205 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 264

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ LC    V  A  L+++M     P +TV+YN+L+ G C LG + ++ Q    +  K 
Sbjct: 265 LIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKS 324

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDI-IAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            +P+  TY+ L+        +  A  LL+++  A G  P++V+Y++++ G  +  R  EA
Sbjct: 325 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 384

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             F +++ ++   PN V+Y+ L+  LC  GR   A E+L  +D     P +VTY I+I  
Sbjct: 385 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEG 440

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    +T+ AL +L+EMV  R  PS  ++N +I  LC  G +D   K L  M     +P 
Sbjct: 441 LCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 500

Query: 378 EGTYNGLAM-------------------------------------------LCGVGKVQ 394
             TY  L                                             LC   ++ 
Sbjct: 501 MVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREID 560

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           +A A+++ L +++    +E    ++  L R G+T +A +L+  ++K G 
Sbjct: 561 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 262/544 (48%), Gaps = 43/544 (7%)

Query: 44  VLASTQVTISPKDSVYTKPNRKPGNNNDTRHR-------DHKLNDAFLQLERMVSKGHKP 96
           V+     T+SP  S + +       + D R +       + KL+DA      MV     P
Sbjct: 20  VVRGNAATVSPSLSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFP 79

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN-------- 148
            +++ + LL  + K NK    I + E M + GI  +  +Y+ L+NC C++          
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVL 139

Query: 149 -----VGY----------------------AMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
                +GY                      A+ LV++M + GY  +TVT+N+L+ GL + 
Sbjct: 140 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLH 199

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
              ++++  +DR++ +G  P+ FTY  ++    K   +  A+ LL  +     + N+V Y
Sbjct: 200 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIY 259

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           N ++ GLCK    ++A   F  + +KG +P+V +YN L+  LC  GRW +A+ LL++M  
Sbjct: 260 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE 319

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P +VT+N LI + A  GK   A K+ DEM++    P+  +YN +I   C   ++D 
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
             +    M  + C P+  TYN L    C   +V+E   + + +  +        Y  +I 
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L + G    A ++  +M   G  PD  TYS L+ GLC  G +E+AL +F  +++   +P
Sbjct: 440 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 499

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           ++  +N ++ G+CK+ + +   ++F  +  KG  PN   YT ++ G   +   E +  + 
Sbjct: 500 NIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 559

Query: 541 KELQ 544
           +E++
Sbjct: 560 REMK 563



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 238/461 (51%), Gaps = 4/461 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A   +++MV  G+KPD V    L++ L   NK  +A+ +++ MV+ G  PD  +Y 
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 225

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VN LCK+G++  A+ L++KME      N V YN+++ GLC   +++ +    +++  K
Sbjct: 226 TVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 285

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ FTY+ L+           A +LL D+I +   PN+V++N L+    KEG+  EA
Sbjct: 286 GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEA 345

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F ++  +  +PN+V+YN L+   CM  R +EA ++   M   D  P +VTYN LI  
Sbjct: 346 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKG 405

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                + +  +++  EM +     +  +YN +I  L   G  D+  K   +M      P+
Sbjct: 406 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 465

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             TY+ L   LC  GK+++A  + + L  K    P  + Y  +I  +C+ GK    + L 
Sbjct: 466 IITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             ++  G  P+   Y+++I G C +GL EEA  +F  M+E    PD   +N L+    + 
Sbjct: 525 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRD 584

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
                S E+ + M   G + + +T ++++  + H   LE S
Sbjct: 585 GDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 624



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 180/384 (46%), Gaps = 3/384 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ ++     +++    P+   +S LL A  K       + L + +   G   N  +Y++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           LL   C+  +   A+     +   G+EP++V+ + LL   C   R  EA  L+ +M    
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P  VT+N LI  L  H K   A+ ++D MV    +P   +Y  ++  LC  G +DL +
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
             L +M   + + N   YN +   LC    + +AF +   +  K    P  F Y  +I+ 
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNSLISC 300

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC  G+   A +LL +M +    P+  T++SLI     EG + EA ++F  M +    P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           +  +N+L+ G C   R D + ++F +M+ K  +P+  TY  L++G      +E   E+ +
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420

Query: 542 ELQLRQVVSESAVERLVMQYDFEG 565
           E+  R +V  +     ++Q  F+ 
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQA 444



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 144/283 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + M+ +   P++V   +L+   C  +++ +A ++  +MVS   +
Sbjct: 334 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 393

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+   CK   V   M+L  +M   G   NTVTYN+L++GL   G+ + + + 
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 453

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             +++  G+ P+  TYS LL+   K   +  A+ + + +     +PN+ +YN+++ G+CK
Sbjct: 454 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCK 513

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+    F  L  KG +PNV+ Y  ++   C +G  EEA+ L  EM      P    
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 573

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           YN LI +    G    + +++ EM    F   A++ + +I  L
Sbjct: 574 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 267/545 (48%), Gaps = 14/545 (2%)

Query: 7   SVSTLANPSPEPFRKAYGFYSQI--PNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNR 64
           S+  L +PS      A G Y Q   P+ H+F + K   R+     +     +++     R
Sbjct: 126 SILRLTSPSKALLDTAIGAYVQSGQPH-HAFQIFKKMKRLRLRPNLLTC--NTLLNSLVR 182

Query: 65  KPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM 124
            P +++ +  R+   NDA       +  G  P+V     ++Y  C  NK K A++ + +M
Sbjct: 183 YPSSHSVSFSRE-AFNDA-------IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVM 234

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
                 PD  +Y  +++ LCKKG +G A  L+  M+  G   N  TYN LV G C +G L
Sbjct: 235 GKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWL 294

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
            ++   ++ + Q  L+P+ +TY+ L+     E  +  A KL D++      P++VSYN L
Sbjct: 295 KEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + G  +  +  EA +   ++  KG +PN V++NI+++  C EG+ ++A+  + +M+    
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           SP  VTYN LI      G    A + +DEM +   +  + + N I+  LC E K++   K
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            L     R    +E +Y  L +     G V  A  +   +  K+       Y  +I  LC
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + GKT QA   L E+ + G  PD  TY++++ G C EG +E+A +    M E  +KPDV 
Sbjct: 535 QCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             N LL GLC     + +L++F   + KG+  +  TY  L+  +  +  L+ +  +L E+
Sbjct: 595 TCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654

Query: 544 QLRQV 548
           + +++
Sbjct: 655 EEKEL 659



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 229/450 (50%), Gaps = 5/450 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +L DA   L  M S+G  P+      L+Y  CK   +K+A  V+E+M  + ++
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N LC +G +  A +L ++ME+     + V+YN+L+ G      ++++ + 
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ + +KG+ PNA T++ +++   KE  +  A   +  +   G  P+ V+YN L+ G CK
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G   EA R   ++  K  + + V+ N +LR+LC E + EEA +LL+           V+
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI      G  D ALK+ DEM +    PS  +YN II  LC  GK +  +  L+++ 
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY--KYVITSLCRKGK 427
                P+E TYN  L   C  G V++AF     +   +NS   + +    ++  LC +G 
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM--VENSFKPDVFTCNILLRGLCMEGM 608

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A +L       G   D+ TY++LI  LC EG +++A  +   MEE +  PD   +NA
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           ++  L  S R   + E    M+EKG +P +
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGXLPXQ 698



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 190/404 (47%), Gaps = 24/404 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++AF  LE M  KG KP+ V    ++   CK  KM  A   +  M  SG  PD  +Y 
Sbjct: 363 KISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYN 422

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK GN+G A + +++M       ++VT N+++R LC    L ++ + L    ++
Sbjct: 423 TLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +  +Y  L+   +K+  V  A+KL D++  K   P+ V+YN ++ GLC+ G+TE+A
Sbjct: 483 GYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I    +L   G  P+  +YN +L   C EG  E+A +   +M      P + T NIL+  
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + ALK+ +  V         +YN +I  LC EG++D     L +M  +   P+
Sbjct: 603 LCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF---------------------- 414
             TYN  +  L   G+++EA   +  +  K     Q                        
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSV 722

Query: 415 -YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            Y   I  LC +GK   A ++  E  + G T D  TY +L+ GL
Sbjct: 723 AYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 184/377 (48%), Gaps = 4/377 (1%)

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA---AMKLLDDIIAKGGKPNL 238
           G  + + Q   ++ +  L PN  T + LL +  +    H+   + +  +D I  G  PN+
Sbjct: 149 GQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV 208

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            ++N+++ G C E + ++A+ F   +      P+ V+YN +L +LC +GR  +A +LL +
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMD 268

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P   TYNIL+      G    A  V++ M +    P   +YN +I  LC+EG+
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           ++   K  D+M + +  P+  +YN L   C    K+ EAF +++ +  K        +  
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++   C++GK   A   + +M + GF+PD  TY++LI G C  G + EA      M   +
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            K D    N +L  LC+ ++ + + ++     ++G   +E +Y  L+ G      ++ + 
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508

Query: 538 EVLKELQLRQVVSESAV 554
           ++  E++ ++++  +  
Sbjct: 509 KLWDEMKEKEIIPSTVT 525



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 142/319 (44%), Gaps = 12/319 (3%)

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS---- 305
           + G+   A + F+ +      PN+++ N LL SL    R+  ++ +    +  + +    
Sbjct: 147 QSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RYPSSHSVSFSREAFNDAIKLG 203

Query: 306 --PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P + T+NI+I       K   A++ L+ M K    P   +YN I+  LC +G++    
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDAR 263

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
             L  M  R   PN  TYN L    C +G ++EA  +I+ L  + N  P  + Y  +I  
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE-LMTQNNLLPDVWTYNMLING 322

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC +G+  +AF+L  EM      PD  +Y++LI G      I EA ++   M E   KP+
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
               N ++   CK  + D +      M E G  P+  TY  L+ G      +  +   + 
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 542 ELQLRQVVSESAVERLVMQ 560
           E+  + +  +S     +++
Sbjct: 443 EMGRKNMKMDSVTLNTILR 461



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 6/262 (2%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII---ARLCSEGKVDL 361
           SP+    +  IG+    G+  HA ++  +M + R RP+  + N ++    R  S   V  
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVI 419
             +  +        PN  T+N +    C   K ++A   +  +G K N SP    Y  ++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMG-KYNCSPDNVTYNTIL 250

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
            +LC+KG+   A  LL +M   G  P+  TY+ L+ G C  G ++EA  +  +M + +  
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           PDV  +N L+ GLC   R + + ++   M     +P+  +Y  L+ G     ++  + ++
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 540 LKELQLRQVVSESAVERLVMQY 561
           L+E+  + V   +    +++++
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKW 392


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 253/520 (48%), Gaps = 41/520 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M  +G  P       +L   C+    + A++V+E + + G   D  +  
Sbjct: 174 RIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCN 233

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C +G+V  A+ L+  +  +G   + V+YN++++GLCM        + ++ +++ 
Sbjct: 234 LVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 293

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T++ L+    +        ++L  ++  G  P++  Y  ++ G+CKEG  E A
Sbjct: 294 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 353

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +PS G +PNVV YN LL+ LC   RWEE  ELLAEM   D     VT+NIL+  
Sbjct: 354 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 413

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D  +++L++M++    P   +Y  +I   C EG +D  V  L  M    CKPN
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 473

Query: 378 EGTYN----GLA--------------------------------MLCGVGKVQEAFAIIQ 401
             +Y     GL                                  LC  G V++A  +++
Sbjct: 474 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 533

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +     S     Y  VI  L + GKT +A +LL  M   G +P++  YSS+   L  EG
Sbjct: 534 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 593

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I + +++F  +++   + D   +NA++  LCK   T+ ++E    M+  G +PNE+TYT
Sbjct: 594 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 653

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           IL+ G+A +  ++ + E+L EL      S+ A+ + +M++
Sbjct: 654 ILIRGLASEGFVKEAQEMLTEL-----CSKGALRKHLMKH 688



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 215/409 (52%), Gaps = 4/409 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +V   C+ G +  A +L   +     P N  TY  +VR LC  G +  +L  LD + 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++G  P    Y  +LEAA +  G  +A+++L+D+ A+G   ++ + N++L  +C +G  +
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA+   RDLPS G EP+VVSYN +L+ LCM  RW    EL+ EM      P IVT+N LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L  +G  +   +VL +MV+    P    Y  II  +C EG +++  + L++M     K
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN   YN L   LC   + +E   ++  + +K        +  ++   C+ G   +  +L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L +M ++G  PD  TY+++I G C EGLI+EA+ +   M     KP+  ++  +L GLC 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + R   + ++   MI++G   N  T+  L+  +  +  +E + E+LK++
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 535



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 42/347 (12%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRT--------------------------------EEAIRF 260
           GG+   V  + L+  LC  GRT                                E A R 
Sbjct: 90  GGEGGSVRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRL 149

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +P     PN  +Y  ++R+LC  GR  +A  +L EM     +P    Y++++ +   
Sbjct: 150 AAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACR 206

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G    A++VL+++          + N ++  +C +G VD  +  L  +    C+P+  +
Sbjct: 207 GGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVS 266

Query: 381 YN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           YN    GL M    G VQE    +  +    N      +  +I+ LCR G   +  ++L 
Sbjct: 267 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV---TFNTLISYLCRNGLFERVHEVLA 323

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M ++G TPD   Y+++I G+C EG +E A EI   M  Y  KP+V  +N LL GLC + 
Sbjct: 324 QMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 383

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R + + E+   M +K    ++ T+ ILV+       ++   E+L+++
Sbjct: 384 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 430



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 14/285 (4%)

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           D P  G E   V  + L+RSLC  GR  EA   L+          +V YN ++      G
Sbjct: 86  DAPGGG-EGGSVRLSSLIRSLCAAGRTAEAARALSAA---GGGAGVVAYNAMVAGYCRAG 141

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + + A ++   +      P+A +Y P++  LC+ G++   +  LD+M  R C P    Y+
Sbjct: 142 QLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYH 198

Query: 383 G-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             L   C  G  + A  +++ L  +  +        V+ ++C +G   +A  LL ++  +
Sbjct: 199 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF 258

Query: 442 GFTPDSYTYSSLIRGLCME---GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
           G  PD  +Y+++++GLCM    G ++E +E  V M      P++  FN L+  LC++   
Sbjct: 259 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA---CPPNIVTFNTLISYLCRNGLF 315

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +   EV   M+E G  P+   Y  +++GI  +  LE++ E+L  +
Sbjct: 316 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 360



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 47/89 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++N      + +     + D V    ++  LCK  + ++AI+ +  MVSSG +P+ S
Sbjct: 591 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 650

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +YT L+  L  +G V  A +++ ++   G
Sbjct: 651 TYTILIRGLASEGFVKEAQEMLTELCSKG 679


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 253/513 (49%), Gaps = 2/513 (0%)

Query: 49  QVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL 108
            +T S      + P +  G  ++T + D  ++DA     RMV    +P VV+    L  +
Sbjct: 48  HITTSACTEKPSLPQKHCGFGSNTSN-DISIDDALTSFYRMVRMNPRPSVVEFGKFLGSI 106

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
            K  +   A+ +   M   G+  +  S   L+NCLC+  +V +A+ ++ KM   G   + 
Sbjct: 107 AKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDA 166

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           +T+N+L+ GLC  G + +++   + ++  G  PN  +Y+ ++    K      A+++   
Sbjct: 167 ITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRK 226

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +    GKPN+V+YN ++  LCK+    EA+ F  ++  +G  P+VV+YN +L   C  G+
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             EA  L  EM G +  P  VT+NIL+  L   G    A  V + M +    P+A +YN 
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           ++   C   ++D  +K L  M  + C PN  +YN L    C   ++ EA  ++  +  K 
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            +     Y  ++  LC+ G+  +A  L  EM   G  PD   YS L+ G C  G ++EAL
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++   M E   KP++  +  L+ G+  + + +++ E+F  +   G  P+  TY ++++G+
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
             +   + + E  ++++    + +S    +++Q
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQ 559



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 225/454 (49%), Gaps = 34/454 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A      MV  GH+P+V+    ++  LCK      A++V   M  +   P+  +Y 
Sbjct: 181 KIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYN 240

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A++ + +M D G P + VTYN+++ G C LG LN++ +    ++ +
Sbjct: 241 TIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR 300

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++P+  T++ L++   KE  V  A  + + +  KG +PN  +YN L+ G C   + +EA
Sbjct: 301 NVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEA 360

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I+    +  KG  PN+ SYNIL+   C   R  EA  LL+EM   + +P  VTY+ L+  
Sbjct: 361 IKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQG 420

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+   AL +  EM      P   +Y+ ++   C  G +D  +K L +M  RR KPN
Sbjct: 421 LCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPN 480

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                                II              Y  +I  +   GK   A +L  +
Sbjct: 481 ---------------------II-------------LYTILIRGMFIAGKLEVAKELFSK 506

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           ++  G  PD +TY+ +I+GL  EGL +EA E F  ME+  + PD  ++N ++ G  +++ 
Sbjct: 507 LSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQD 566

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           +  ++++   M+ K    + +T+ +L++  +H +
Sbjct: 567 SSTAIQLIDEMVGKRFSADSSTFQMLLDLESHDE 600



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 189/384 (49%), Gaps = 34/384 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  +N+A   L  MV +G  PDVV    +L+  C   ++ +A ++ + MV   ++
Sbjct: 244 DSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVM 303

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  LV+ LCK+G V  A  + E M + G   N  TYN+L+ G C+   ++++++ 
Sbjct: 304 PDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKV 363

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +I KG  PN  +Y+ L+    K + ++ A +LL ++  K   P+ V+Y+ L+ GLC+
Sbjct: 364 LGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQ 423

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA+  F+++ S G  P++++Y+ILL   C  G  +EA +LL EM      P I+ 
Sbjct: 424 VGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIIL 483

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ILI  +   GK + A ++  ++     RP   +YN +I  L  EG  D   +   +M 
Sbjct: 484 YTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKME 543

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
                P+  +YN                IIQ     Q+SS                    
Sbjct: 544 DDGFLPDSCSYN---------------VIIQGFLQNQDSS-------------------T 569

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLI 454
           A QL+ EM    F+ DS T+  L+
Sbjct: 570 AIQLIDEMVGKRFSADSSTFQMLL 593


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 267/545 (48%), Gaps = 14/545 (2%)

Query: 7   SVSTLANPSPEPFRKAYGFYSQI--PNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNR 64
           S+  L +PS      A G Y Q   P+ H+F + K   R+     +     +++     R
Sbjct: 126 SILRLTSPSKALLDTAIGAYVQSGQPH-HAFQIFKKMKRLRLRPNLLTC--NTLLNSLVR 182

Query: 65  KPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM 124
            P +++ +  R+   NDA       +  G  P+V     ++Y  C  NK K A++ + +M
Sbjct: 183 YPSSHSVSFSRE-AFNDA-------IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVM 234

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
                 PD  +Y  +++ LCKKG +G A  L+  M+  G   N  TYN LV G C +G L
Sbjct: 235 GKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWL 294

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
            ++   ++ + Q  L+P+ +TY+ L+     E  +  A KL D++      P++VSYN L
Sbjct: 295 KEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + G  +  +  EA +   ++  KG +PN V++NI+++  C EG+ ++A+  + +M+    
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           SP  VTYN LI      G    A + +DEM +   +  + + N I+  LC E K++   K
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            L     R    +E +Y  L +     G V  A  +   +  K+       Y  +I  LC
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + GKT QA   L E+ + G  PD  TY++++ G C EG +E+A +    M E  +KPDV 
Sbjct: 535 QCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             N LL GLC     + +L++F   + KG+  +  TY  L+  +  +  L+ +  +L E+
Sbjct: 595 TCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654

Query: 544 QLRQV 548
           + +++
Sbjct: 655 EEKEL 659



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 231/450 (51%), Gaps = 5/450 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  +  +L DA   L  M S+G  P+      L+Y  CK   +K+A  V+E+M  + ++
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N LC +G +  A +L ++ME+     + V+YN+L+ G      ++++ + 
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ + +KG+ PNA T++ +++   KE  +  A   +  +   G  P+ V+YN L+ G CK
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G   EA R   ++  K  + + V+ N +LR+LC E + EEA +LL+           V+
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI      G  D ALK+ DEM +    PS  +YN II  LC  GK +  +  L+++ 
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY--KYVITSLCRKGK 427
                P+E TYN  L   C  G V++AF     +   +NS   + +    ++  LC +G 
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM--VENSFKPDVFTCNILLRGLCMEGV 608

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A +L       G   D+ TY++LI  LC EG +++A  +   MEE +  PD   +NA
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           ++  L  S R   + E    M+EKG +P++
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGNLPDQ 698



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 191/404 (47%), Gaps = 24/404 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++AF  LE M  KG KP+ V    ++   CK  KM  A   +  M  SG  PD  +Y 
Sbjct: 363 KISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYN 422

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK GN+G A + +++M       ++VT N+++R LC    L ++ + L    ++
Sbjct: 423 TLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +  +Y  L+   +K+  V  A+KL D++  K   P+ V+YN ++ GLC+ G+TE+A
Sbjct: 483 GYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I    +L   G  P+  +YN +L   C EG  E+A +   +M      P + T NIL+  
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + ALK+ +  V         +YN +I  LC EG++D     L +M  +   P+
Sbjct: 603 LCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF---------------------- 414
             TYN  +  L   G+++EA   +  +  K N   Q                        
Sbjct: 663 HYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSV 722

Query: 415 -YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            Y   I  LC +GK   A ++  E  + G T D  TY +L+ GL
Sbjct: 723 AYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 184/377 (48%), Gaps = 4/377 (1%)

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA---AMKLLDDIIAKGGKPNL 238
           G  + + Q   ++ +  L PN  T + LL +  +    H+   + +  +D I  G  PN+
Sbjct: 149 GQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV 208

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            ++N+++ G C E + ++A+ F   +      P+ V+YN +L +LC +GR  +A +LL +
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMD 268

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P   TYNIL+      G    A  V++ M +    P   +YN +I  LC+EG+
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           ++   K  D+M + +  P+  +YN L   C    K+ EAF +++ +  K        +  
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++   C++GK   A   + +M + GF+PD  TY++LI G C  G + EA      M   +
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            K D    N +L  LC+ ++ + + ++     ++G   +E +Y  L+ G      ++ + 
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508

Query: 538 EVLKELQLRQVVSESAV 554
           ++  E++ ++++  +  
Sbjct: 509 KLWDEMKEKEIIPSTVT 525



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 142/319 (44%), Gaps = 12/319 (3%)

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS---- 305
           + G+   A + F+ +      PN+++ N LL SL    R+  ++ +    +  + +    
Sbjct: 147 QSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RYPSSHSVSFSREAFNDAIKLG 203

Query: 306 --PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P + T+NI+I       K   A++ L+ M K    P   +YN I+  LC +G++    
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDAR 263

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
             L  M  R   PN  TYN L    C +G ++EA  +I+ L  + N  P  + Y  +I  
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE-LMTQNNLLPDVWTYNMLING 322

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC +G+  +AF+L  EM      PD  +Y++LI G      I EA ++   M E   KP+
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
               N ++   CK  + D +      M E G  P+  TY  L+ G      +  +   + 
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 542 ELQLRQVVSESAVERLVMQ 560
           E+  + +  +S     +++
Sbjct: 443 EMGRKNMKMDSVTLNTILR 461



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 6/262 (2%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII---ARLCSEGKVDL 361
           SP+    +  IG+    G+  HA ++  +M + R RP+  + N ++    R  S   V  
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVI 419
             +  +        PN  T+N +    C   K ++A   +  +G K N SP    Y  ++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMG-KYNCSPDNVTYNTIL 250

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
            +LC+KG+   A  LL +M   G  P+  TY+ L+ G C  G ++EA  +  +M + +  
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           PDV  +N L+ GLC   R + + ++   M     +P+  +Y  L+ G     ++  + ++
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 540 LKELQLRQVVSESAVERLVMQY 561
           L+E+  + V   +    +++++
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKW 392


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 253/520 (48%), Gaps = 41/520 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M  +G  P       +L   C+    + A++V+E + + G   D  +  
Sbjct: 137 RIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCN 196

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C +G+V  A+ L+  +  +G   + V+YN++++GLCM        + ++ +++ 
Sbjct: 197 LVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T++ L+    +        ++L  ++  G  P++  Y  ++ G+CKEG  E A
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 316

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +PS G +PNVV YN LL+ LC   RWEE  ELLAEM   D     VT+NIL+  
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D  +++L++M++    P   +Y  +I   C EG +D  V  L  M    CKPN
Sbjct: 377 FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 378 EGTYN----GLA--------------------------------MLCGVGKVQEAFAIIQ 401
             +Y     GL                                  LC  G V++A  +++
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +     S     Y  VI  L + GKT +A +LL  M   G +P++  YSS+   L  EG
Sbjct: 497 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I + +++F  +++   + D   +NA++  LCK   T+ ++E    M+  G +PNE+TYT
Sbjct: 557 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           IL+ G+A +  ++ + E+L EL      S+ A+ + +M++
Sbjct: 617 ILIRGLASEGFVKEAQEMLTEL-----CSKGALRKHLMKH 651



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 214/409 (52%), Gaps = 4/409 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +V   C+ G +  A +L   +     P N  TY  +VR LC  G +  +L  LD + 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++G  P    Y  +LEAA +  G  +A+++L+D+ A+G   ++ + N++L  +C +G  +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA+   RDLPS G EP+VVSYN +L+ LCM  RW    EL+ EM      P IVT+N LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L  +G  +   +VL +MV+    P    Y  II  +C EG +++  + L++M     K
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN   YN L   LC   + +E   ++  + +K        +  ++   C+ G   +  +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L +M + G  PD  TY+++I G C EGLI+EA+ +   M     KP+  ++  +L GLC 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + R   + ++   MI++G   N  T+  L+  +  +  +E + E+LK++
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 156/350 (44%), Gaps = 42/350 (12%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRT--------------------------------EEAIRF 260
           GG+   V  + L+  LC  GRT                                E A R 
Sbjct: 53  GGEGGSVRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRL 112

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +P     PN  +Y  ++R+LC  GR  +A  +L EM     +P    Y++++ +   
Sbjct: 113 AAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACR 169

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G    A++VL+++          + N ++  +C +G VD  +  L  +    C+P+  +
Sbjct: 170 GGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVS 229

Query: 381 YN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           YN    GL M    G VQE    +  +    N      +  +I+ LCR G   +  ++L 
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV---TFNTLISYLCRNGLFERVHEVLA 286

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M ++G TPD   Y+++I G+C EG +E A EI   M  Y  KP+V  +N LL GLC + 
Sbjct: 287 QMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 346

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           R + + E+   M +K    ++ T+ ILV+       ++   E+L+++  R
Sbjct: 347 RWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLER 396



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 14/285 (4%)

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           D P  G E   V  + L+RSLC  GR  EA   L+          +V YN ++      G
Sbjct: 49  DAPGGG-EGGSVRLSSLIRSLCAAGRTAEAARALSAA---GGGAGVVAYNAMVAGYCRAG 104

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + + A ++   +      P+A +Y P++  LC+ G++   +  LD+M  R C P    Y+
Sbjct: 105 QLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYH 161

Query: 383 G-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             L   C  G  + A  +++ L  +  +        V+ ++C +G   +A  LL ++  +
Sbjct: 162 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF 221

Query: 442 GFTPDSYTYSSLIRGLCME---GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
           G  PD  +Y+++++GLCM    G ++E +E  V M      P++  FN L+  LC++   
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA---CPPNIVTFNTLISYLCRNGLF 278

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +   EV   M+E G  P+   Y  +++GI  +  LE++ E+L  +
Sbjct: 279 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 323



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 47/89 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++N      + +     + D V    ++  LCK  + ++AI+ +  MVSSG +P+ S
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +YT L+  L  +G V  A +++ ++   G
Sbjct: 614 TYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 242/484 (50%), Gaps = 45/484 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGI 129
           D   RD K++ A   +  M  KG +PD    + L+   C A K+ +A+K+  E++ SS  
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  +YT L++  CK GN+  AM+++  ME      N VTY+SL+ GLC  G+L+Q+L 
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              R+  KG VPN  TY+ L+        V AA  L+D++ A    P+ VSYN LL G C
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD-GGDRSPTI 308
           + GR EEA + F+++ +K   P+ ++Y  L+R  C   R EEA  LL  M       P +
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VTY+I++   +   +   A + + EM+     P+A +Y+ +I  LC  G+VD  ++ L  
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           M ++R +P+ GT+N               ++I +L                   CR G  
Sbjct: 421 MVNKRVEPSVGTFN---------------SVIGAL-------------------CRLGDM 446

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME--------EYDYKP 480
            +A++LL  M  +G  P   TY++L+ G    G +E A E+F VM           +  P
Sbjct: 447 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVP 506

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +   F+AL+ GLCK+R  D ++ V + +  +   P E     +V+G+      E + +++
Sbjct: 507 E-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 565

Query: 541 KELQ 544
             + 
Sbjct: 566 NSIS 569



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 224/442 (50%), Gaps = 5/442 (1%)

Query: 108 LCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY-GYP 165
           LCKA    KA +V+ EM     + PD  +Y+ ++N  CK+G +  A +++ +M    G  
Sbjct: 51  LCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIA 110

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            + VTY S+V GLC  G ++++ + +  +  KG+ P+ FT+S L+      R V  A+KL
Sbjct: 111 PDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKL 170

Query: 226 LDDII-AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
             +I+ +   KP++V+Y  L+ G CK G  E+A++    +  +   PNVV+Y+ LL  LC
Sbjct: 171 YKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC 230

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G  ++A +L   M      P +VTY  LI  L    K D A  ++DEM      P   
Sbjct: 231 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTV 290

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSL 403
           SYN ++   C  G+++   +   +M  + C P+  TY  L    C   +++EA  +++++
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350

Query: 404 GNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
                  P    Y  V+    R  +  +A + + EM      P++ TYSSLI GLC  G 
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 410

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++ A+E+   M     +P V  FN+++  LC+    D + ++   M   G  P   TYT 
Sbjct: 411 VDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470

Query: 523 LVEGIAHQDELELSAEVLKELQ 544
           L+EG +    +E++ E+ + ++
Sbjct: 471 LLEGFSRTGRMEIAYELFEVMR 492



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 181/383 (47%), Gaps = 39/383 (10%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           PT  VT+  ++ G C    L Q+L   +++ ++ + PN  TY+ ++    K R    A +
Sbjct: 5   PT-VVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 225 LLDDII-AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRS 282
           +L ++   K   P+LV+Y+ ++ G CK+G  + A    R++ ++ G  P+VV+Y  ++  
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRP 341
           LC +G+ + A E++ EM      P   T++ LI       K D ALK+  E++    ++P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQ 401
              +Y  +I   C  G ++  +K L  M  R+C PN  TY+ L                 
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL----------------- 225

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                            +  LC+ G   QA  L   MT  G  P+  TY++LI GLC   
Sbjct: 226 -----------------LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAH 268

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++ A  +   M      PD  ++NALL G C+  R + + ++F+ M  K  +P+  TYT
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYT 328

Query: 522 ILVEGIAHQDELELSAEVLKELQ 544
            LV G  +   LE +  +L+ ++
Sbjct: 329 CLVRGFCNASRLEEARFLLENMK 351


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 245/456 (53%), Gaps = 1/456 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M ++G KPDVV    L+  LC+A++++ A+ ++E M S G+ PD +++T L+    ++G+
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+++  +M + G     VT N L+ G C LG +  +L ++ + I  G  P+  TY+ 
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            +    +   V  A+K++D ++ +G  P++ +YN+++  LCK G+ EEA      +  +G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P++ ++N L+ +LC   R EEA +L  ++     SP + T+NILI +L   G    AL
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++ +EM      P   +YN +I  LCS GK+   +  L  M    C  +  TYN +   L
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   +++EA  +   +  +  S     +  +I  LC+  K   AF+L+ +M   G  P++
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+S++   C +G I++A +I   M    ++ DV  +  L+ GLCK+ RT ++L+V + 
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 591

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M  KG  P    Y  +++ +  ++ +  +  + +E+
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 227/454 (50%), Gaps = 1/454 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H++  A + LE M S+G  PD    T L+    +   ++ A++V   M+  G      
Sbjct: 193 RAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N  CK G V  A+  +++    G+  + +TYN+ V GLC   ++  +L+ +D +
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+G  P+ FTY+ ++    K   +  A  +L+ ++ +G  P++ ++N L+  LC   R 
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+   R +  KG  P+V ++NIL+ +LC  G    A  L  EM     +P  VTYN L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   GK   AL +L +M       S  +YN II  LC + +++   +  DQM  +  
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N  T+N L   LC   K+ +AF +I  + ++        Y  ++T  C++G   +A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  MT  GF  D  TY +LI GLC  G  + AL++   M     +P    +N +L  L 
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +      +L +F+ M E G+ P+  TY I+  G+
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 646



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 224/436 (51%), Gaps = 2/436 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   +++ ++ G +PD +     +  LC+ + +  A+KVM++MV  G  PD  +Y 
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VNCLCK G +  A  ++ +M D G   +  T+N+L+  LC    L ++L    ++  K
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ +T++ L+ A  K    H A++L +++   G  P+ V+YN L+  LC  G+  +A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   +D+ S G   + ++YN ++  LC + R EEA E+  +MD    S   +T+N LI  
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K D A +++++M+    +P+  +YN I+   C +G +      L+ M     + +
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC  G+ Q A  +++ +  K      + Y  V+ SL R+     A  L  
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625

Query: 437 EMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           EM + G  PD+ TY  + RGLC   G I+EA +  + M +  + P+  +F  L  GL   
Sbjct: 626 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 685

Query: 496 RRTDLSLEVFQMMIEK 511
              D  +   ++++EK
Sbjct: 686 GMDDYFIRAIEIIMEK 701



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 197/407 (48%), Gaps = 36/407 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L +A   L +MV +G  PD+     L+  LC  N++++A+ +   +   G+ PD  
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LCK G+   A++L E+M++ G   + VTYN+L+  LC LG L ++L  L  +
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G   +  TY+ +++   K+  +  A ++ D +  +G   N +++N L+ GLCK+ + 
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      + S+G +PN ++YN +L   C +G  ++A ++L  M        +VTY  L
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+T  ALKVL  M     RP+  +YNP+                L  +F R  
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV----------------LQSLFRR-- 614

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY-QAFQ 433
                             +++A ++ + +           YK V   LCR G    +AF 
Sbjct: 615 ----------------NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 658

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE-IFVVMEEYDYK 479
            + EM   GF P+  ++  L  GL   G+ +  +  I ++ME+ D +
Sbjct: 659 FMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLR 705



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 176/393 (44%), Gaps = 35/393 (8%)

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           +G   +TV YN L+  L     +         +  +G+ P+  T++ L++A  +   V  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+ +L+++ ++G  P+  ++  L+ G  +EG  E A+R    +   G     V+ N+L+ 
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  GR E+A   + +       P  +TYN  +  L  +    HALKV+D MV+    P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQ 401
              +YN ++  LC  G+++     L+QM  R C P+  T                     
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT--------------------- 358

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                        +  +I +LC   +  +A  L  ++T  G +PD YT++ LI  LC  G
Sbjct: 359 -------------FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
               AL +F  M+     PD   +N L+  LC   +   +L++ + M   G   +  TY 
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +++G+  +  +E + EV  ++ L Q +S +A+
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDL-QGISRNAI 497


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 245/456 (53%), Gaps = 1/456 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M ++G KPDVV    L+  LC+A++++ A+ ++E M S G+ PD +++T L+    ++G+
Sbjct: 80  MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 139

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+++  +M + G     VT N L+ G C LG +  +L ++ + I  G  P+  TY+ 
Sbjct: 140 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 199

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            +    +   V  A+K++D ++ +G  P++ +YN+++  LCK G+ EEA      +  +G
Sbjct: 200 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P++ ++N L+ +LC   R EEA +L  ++     SP + T+NILI +L   G    AL
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++ +EM      P   +YN +I  LCS GK+   +  L  M    C  +  TYN +   L
Sbjct: 320 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 379

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   +++EA  +   +  +  S     +  +I  LC+  K   AF+L+ +M   G  P++
Sbjct: 380 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 439

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+S++   C +G I++A +I   M    ++ DV  +  L+ GLCK+ RT ++L+V + 
Sbjct: 440 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 499

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M  KG  P    Y  +++ +  ++ +  +  + +E+
Sbjct: 500 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 535



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 227/456 (49%), Gaps = 1/456 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H++  A L LE M S+G  PD    T L+    +   ++ A++V   M+  G      
Sbjct: 101 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 160

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N  CK G V  A+  +++    G+  + +TYN+ V GLC   ++  +L+ +D +
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 220

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+G  P+ FTY+ ++    K   +  A  +L+ ++ +G  P++ ++N L+  LC   R 
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+   R +  KG  P+V ++NIL+ +LC  G    A  L  EM     +P  VTYN L
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   GK   AL +L +M       S  +YN II  LC + +++   +  DQM  +  
Sbjct: 341 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 400

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N  T+N L   LC   K+ +AF +I  + ++        Y  ++T  C++G   +A  
Sbjct: 401 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 460

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  MT  GF  D  TY +LI GLC  G  + AL++   M     +P    +N +L  L 
Sbjct: 461 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 520

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           +      +L +F+ M E G+ P+  TY I+  G+  
Sbjct: 521 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 556



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 224/436 (51%), Gaps = 2/436 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   +++ ++ G +PD +     +  LC+ + +  A+KVM++MV  G  PD  +Y 
Sbjct: 174 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 233

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VNCLCK G +  A  ++ +M D G   +  T+N+L+  LC    L ++L    ++  K
Sbjct: 234 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 293

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ +T++ L+ A  K    H A++L +++   G  P+ V+YN L+  LC  G+  +A
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   +D+ S G   + ++YN ++  LC + R EEA E+  +MD    S   +T+N LI  
Sbjct: 354 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 413

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K D A +++++M+    +P+  +YN I+   C +G +      L+ M     + +
Sbjct: 414 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 473

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC  G+ Q A  +++ +  K      + Y  V+ SL R+     A  L  
Sbjct: 474 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 533

Query: 437 EMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           EM + G  PD+ TY  + RGLC   G I+EA +  + M +  + P+  +F  L  GL   
Sbjct: 534 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 593

Query: 496 RRTDLSLEVFQMMIEK 511
              D  +   ++++EK
Sbjct: 594 GMDDYFIRAIEIIMEK 609



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 197/409 (48%), Gaps = 40/409 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L +A   L +MV +G  PD+     L+  LC  N++++A+ +   +   G+ PD  
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 300

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LCK G+   A++L E+M++ G   + VTYN+L+  LC LG L ++L  L  +
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G   +  TY+ +++   K+  +  A ++ D +  +G   N +++N L+ GLCK+ + 
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      + S+G +PN ++YN +L   C +G  ++A ++L  M        +VTY  L
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+T  ALKVL  M     RP+  +YNP+                L  +F R  
Sbjct: 481 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV----------------LQSLFRRN- 523

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR-KGKTYQAFQ 433
                             +++A ++ + +           YK V   LCR  G   +AF 
Sbjct: 524 -----------------NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 566

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLC---MEGLIEEALEIFVVMEEYDYK 479
            + EM   GF P+  ++  L  GL    M+     A+EI  +ME+ D +
Sbjct: 567 FMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEI--IMEKVDLR 613



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 176/393 (44%), Gaps = 35/393 (8%)

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           +G   +TV YN L+  L     +         +  +G+ P+  T++ L++A  +   V  
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+ +L+++ ++G  P+  ++  L+ G  +EG  E A+R    +   G     V+ N+L+ 
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  GR E+A   + +       P  +TYN  +  L  +    HALKV+D MV+    P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQ 401
              +YN ++  LC  G+++     L+QM  R C P+  T                     
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT--------------------- 266

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                        +  +I +LC   +  +A  L  ++T  G +PD YT++ LI  LC  G
Sbjct: 267 -------------FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 313

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
               AL +F  M+     PD   +N L+  LC   +   +L++ + M   G   +  TY 
Sbjct: 314 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 373

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +++G+  +  +E + EV  ++ L Q +S +A+
Sbjct: 374 TIIDGLCKKMRIEEAEEVFDQMDL-QGISRNAI 405



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 1/281 (0%)

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
           P  G + + V YN LL  L    + +    + +EM      P +VT+N L+ +L    + 
Sbjct: 46  PLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 105

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A+ +L+EM      P   ++  ++     EG ++  ++   +M    C   + T N L
Sbjct: 106 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 165

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C +G+V++A   IQ          Q  Y   +  LC+      A +++  M + G 
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD +TY+ ++  LC  G +EEA  I   M +    PD+  FN L+  LC   R + +L+
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 285

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + + +  KG  P+  T+ IL+  +    +  L+  + +E++
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 326


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 245/456 (53%), Gaps = 1/456 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M ++G KPDVV    L+  LC+A++++ A+ ++E M S G+ PD +++T L+    ++G+
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+++  +M + G     VT N L+ G C LG +  +L ++ + I  G  P+  TY+ 
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            +    +   V  A+K++D ++ +G  P++ +YN+++  LCK G+ EEA      +  +G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P++ ++N L+ +LC   R EEA +L  ++     SP + T+NILI +L   G    AL
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++ +EM      P   +YN +I  LCS GK+   +  L  M    C  +  TYN +   L
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   +++EA  +   +  +  S     +  +I  LC+  K   AF+L+ +M   G  P++
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+S++   C +G I++A +I   M    ++ DV  +  L+ GLCK+ RT ++L+V + 
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 591

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M  KG  P    Y  +++ +  ++ +  +  + +E+
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 227/454 (50%), Gaps = 1/454 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H++  A L LE M S+G  PD    T L+    +   ++ A++V   M+  G      
Sbjct: 193 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N  CK G V  A+  +++    G+  + +TYN+ V GLC   ++  +L+ +D +
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+G  P+ FTY+ ++    K   +  A  +L+ ++ +G  P++ ++N L+  LC   R 
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+   R +  KG  P+V ++NIL+ +LC  G    A  L  EM     +P  VTYN L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   GK   AL +L +M       S  +YN II  LC + +++   +  DQM  +  
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N  T+N L   LC   K+ +AF +I  + ++        Y  ++T  C++G   +A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  MT  GF  D  TY +LI GLC  G  + AL++   M     +P    +N +L  L 
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +      +L +F+ M E G+ P+  TY I+  G+
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 646



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 224/436 (51%), Gaps = 2/436 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   +++ ++ G +PD +     +  LC+ + +  A+KVM++MV  G  PD  +Y 
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VNCLCK G +  A  ++ +M D G   +  T+N+L+  LC    L ++L    ++  K
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ +T++ L+ A  K    H A++L +++   G  P+ V+YN L+  LC  G+  +A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   +D+ S G   + ++YN ++  LC + R EEA E+  +MD    S   +T+N LI  
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K D A +++++M+    +P+  +YN I+   C +G +      L+ M     + +
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC  G+ Q A  +++ +  K      + Y  V+ SL R+     A  L  
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625

Query: 437 EMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           EM + G  PD+ TY  + RGLC   G I+EA +  + M +  + P+  +F  L  GL   
Sbjct: 626 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 685

Query: 496 RRTDLSLEVFQMMIEK 511
              D  +   ++++EK
Sbjct: 686 GMDDYFIRAIEIIMEK 701



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 197/407 (48%), Gaps = 36/407 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L +A   L +MV +G  PD+     L+  LC  N++++A+ +   +   G+ PD  
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LCK G+   A++L E+M++ G   + VTYN+L+  LC LG L ++L  L  +
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G   +  TY+ +++   K+  +  A ++ D +  +G   N +++N L+ GLCK+ + 
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      + S+G +PN ++YN +L   C +G  ++A ++L  M        +VTY  L
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+T  ALKVL  M     RP+  +YNP+                L  +F R  
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV----------------LQSLFRR-- 614

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY-QAFQ 433
                             +++A ++ + +           YK V   LCR G    +AF 
Sbjct: 615 ----------------NNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 658

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE-IFVVMEEYDYK 479
            + EM   GF P+  ++  L  GL   G+ +  +  I ++ME+ D +
Sbjct: 659 FMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLR 705



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 176/393 (44%), Gaps = 35/393 (8%)

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           +G   +TV YN L+  L     +         +  +G+ P+  T++ L++A  +   V  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+ +L+++ ++G  P+  ++  L+ G  +EG  E A+R    +   G     V+ N+L+ 
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  GR E+A   + +       P  +TYN  +  L  +    HALKV+D MV+    P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQ 401
              +YN ++  LC  G+++     L+QM  R C P+  T                     
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT--------------------- 358

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                        +  +I +LC   +  +A  L  ++T  G +PD YT++ LI  LC  G
Sbjct: 359 -------------FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
               AL +F  M+     PD   +N L+  LC   +   +L++ + M   G   +  TY 
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +++G+  +  +E + EV  ++ L Q +S +A+
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDL-QGISRNAI 497


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 230/466 (49%), Gaps = 1/466 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     RM+     P  V  T LL  + K       + +   M S GI PD  +   
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    +GYA  ++ K+   G   +  T+N+L+RGLC+ G + ++L   D+ I +G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY  L+    K     AA++LL  ++ K  +PN+++YN ++  LCK+ +  EA 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG  P++ +YN L+ +LC    W+    LL EM      P +V ++ ++ +L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A  V+D M+K    P   +Y  ++   C   ++D  VK  D M H+ C PN 
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +YN L    C + ++ +A  +++ +  +   +    Y  +I  LC  G+   A  L +E
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TY  L+  LC    + EA+ +   +E  +   D+  +N  + G+C++  
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + + ++F  +  KG  P+  TY I++ G+  +  L+ + ++ +++
Sbjct: 551 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 596



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 228/481 (47%), Gaps = 11/481 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  AF  L +++  G +PD      L+  LC   K+ +A+ + +  +  G  PD  +Y 
Sbjct: 200 RLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYG 259

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK GN   A++L+  M       N + YN+++  LC    + ++      +I K
Sbjct: 260 TLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK 319

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ FTY+ L+ A            LL++++     PN+V ++ ++  LCKEG    A
Sbjct: 320 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 379

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  +G EP+VV+Y  L+   C+    +EA ++   M      P + +YNILI  
Sbjct: 380 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 439

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                + D A+ +L++M          +YN +I  LC  G++   +    +M      P+
Sbjct: 440 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 499

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC    + EA  +++++      +    Y   I  +CR G+   A  L  
Sbjct: 500 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 559

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            ++  G  PD  TY+ +I GLC  GL++EA ++F  M+E     D   +N ++ G  +S 
Sbjct: 560 NLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSN 619

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL---------KELQLRQ 547
            T  + ++ Q M+ +G   + +T T++VE ++  D L+ S E L         +EL LR 
Sbjct: 620 ETFGATQLLQEMLAEGFSADVSTTTLIVEMLS-DDGLDQSFERLRLRGVGEEDRELHLRG 678

Query: 548 V 548
           V
Sbjct: 679 V 679



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 187/392 (47%), Gaps = 34/392 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF     M++KG  PD+    +L++ LC   + K    ++  MV+S I+
Sbjct: 298 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 357

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   ++ +V+ LCK+G +  A  +V+ M   G   + VTY +L+ G C+   ++++++ 
Sbjct: 358 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 417

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG VPN  +Y+ L+    + + +  AM LL+ +  +G   + V+YN L+ GLC 
Sbjct: 418 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 477

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR + AI  F ++ + G  P++V+Y ILL  LC      EA  LL  ++G +    I+ 
Sbjct: 478 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 537

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI I  +   G+ + A  +   +     +P   +YN +I  LC  G +D   K   +M 
Sbjct: 538 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 597

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C  +   YN                                   +I    R  +T+ 
Sbjct: 598 ENGCSRDGCIYN----------------------------------TIIRGFLRSNETFG 623

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           A QLL EM   GF+ D  T + ++  L  +GL
Sbjct: 624 ATQLLQEMLAEGFSADVSTTTLIVEMLSDDGL 655



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 183/379 (48%), Gaps = 1/379 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ +L   +R++     P+   ++ LL +  K +     + L   + + G  P++ + N+
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C   R   A      L   G +P+  ++N L+R LC+EG+  EA  L  +  G  
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  L+  L   G T  A+++L  MV+   RP+  +YN II  LC + +V    
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
               +M  +   P+  TYN L   LC + + +    ++  + N +       +  V+ +L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++G    A  ++  M K G  PD  TY++L+ G C+   ++EA+++F  M      P+V
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            ++N L+ G C+ +R D ++ + + M  +G + +  TY  L+ G+ H   L+ +  +  E
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 543 LQLRQVVSESAVERLVMQY 561
           +     + +    R+++ Y
Sbjct: 491 MVASGQIPDLVTYRILLDY 509


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 261/544 (47%), Gaps = 43/544 (7%)

Query: 44  VLASTQVTISPKDSVYTKPNRKPGNNNDTRHR-------DHKLNDAFLQLERMVSKGHKP 96
           V+     T+SP  S + +       + D R +       + KL+DA      MV     P
Sbjct: 20  VVRGNVATVSPSFSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFP 79

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
            +++ + LL  + K NK    I + E M + G+  +  +Y+ L+NC C++  +  A+ ++
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVL 139

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
            KM   GY  N VT +SL+ G C    +++++  +D++   G  PN  T++ L+   +  
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT---------------------- 254
                A+ L+D ++AKG +P+LV+Y V++ GLCK G T                      
Sbjct: 200 NKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIY 259

Query: 255 -------------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
                        ++A+  F+++ +KG  PNVV+Y+ L+  LC  GRW +A+ LL++M  
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P + T++ LI +    GK   A K+ DEMVK    PS  +Y+ +I   C   ++D 
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
             +  + M  + C P+  +Y+ L    C   +V E   + + +  +        Y  +I 
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L + G    A ++  EM   G  P+  TY++L+ GLC  G +E+A+ +F  ++    +P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            +  +N ++ G+CK+ + +   ++F  +  KG  P+   Y  ++ G   +   E +  + 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 541 KELQ 544
           KE++
Sbjct: 560 KEMK 563



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 214/427 (50%), Gaps = 2/427 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +K ++A   ++RMV+KG +PD+V    ++  LCK      A  ++  M    + P    Y
Sbjct: 200 NKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIY 259

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T +++ LCK  ++  A+ L ++ME  G   N VTY+SL+  LC  G  + + + L  +I+
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           + + P+ FT+S L++A  KE  +  A KL D+++ +   P++V+Y+ L+ G C   R +E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A + F  + SK   P+VVSY+ L++  C   R +E  EL  EM         VTY  LI 
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G  D A ++  EMV     P+  +YN ++  LC  GK++  +   + +   + +P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 377 NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
              TYN  +  +C  GKV++ + +  +L  K        Y  +I+  CRKG   +A  L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM + G  P+S  Y++LIR    +G  E + E+   M    +  D      L+  +   
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHD 618

Query: 496 RRTDLSL 502
            R D S 
Sbjct: 619 GRLDKSF 625



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 157/310 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  ++DA    + M +KG +P+VV  ++L+  LC   +   A +++  M+   I PD  
Sbjct: 268 KNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +++ L++   K+G +  A +L ++M       + VTY+SL+ G CM   L+++ Q  + +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + K   P+  +YS L++   K + V   M+L  ++  +G   N V+Y  L+ GL + G  
Sbjct: 388 VSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDC 447

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A   F+++ S G  PN+++YN LL  LC  G+ E+A  +   +      PTI TYNI+
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +   GK +    +   +     +P   +YN +I+  C +G  +       +M     
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567

Query: 375 KPNEGTYNGL 384
            PN G YN L
Sbjct: 568 LPNSGCYNTL 577



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 1/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + MV +   P +V  ++L+   C  +++ +A ++ E MVS    
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SY+ L+   CK   V   M+L  +M   G   NTVTY +L++GL   G+ + + + 
Sbjct: 394 PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEI 453

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  G+ PN  TY+ LL+   K   +  AM + + +     +P + +YN+++ G+CK
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+    F +L  KG +P+VV+YN ++   C +G  EEA+ L  EM      P    
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YN LI +    G  + + +++ EM    F   A++   ++  +  +G++D
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 622


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 235/456 (51%), Gaps = 1/456 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV +  + DV     L+  LCKA++++ AI +ME M S G+ PD +++T ++    + GN
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+++ E+M +YG P   VT N L+ G C  G ++Q+L F+   + +G  P+ FTY+ 
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K      AM+++D ++  G  P++ +YN L++GLCK G  EEA++    + S+ 
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN V+YN ++ SLC E R +EA E+   +      P + T+N LI  L        A+
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            + +EM     RP   +YN +I  LCS  K++  +  L +M    C  N   YN L    
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGF 493

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   +++EA  I   +  +  S     Y  +I  LC+  +   A QL+ +M   G  PD 
Sbjct: 494 CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           +TY+SL+   C  G I++A +I   M      PD+  +  L+ GLCK+ R  ++  + + 
Sbjct: 554 FTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRS 613

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +  KG +     Y  +++ +  ++    +  + +E+
Sbjct: 614 IQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREM 649



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 234/457 (51%), Gaps = 3/457 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + H++  A L +E M S G  PD    T ++    +   +  A+++ E MV  G      
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N  CK+G +  A+  +++    G+  +  TYN+LV GLC +G+   +++ +D +
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GL P+ +TY+ L+    K   +  A+K+LD ++++   PN V+YN +++ LCKE R 
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRV 394

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA    R L SKG  P+V ++N L++ LC+    + A +L  EM G    P   TYN+L
Sbjct: 395 DEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNML 454

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL    K + AL +L EM       +   YN +I   C   +++   +  D+M  +  
Sbjct: 455 IDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV 514

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
             +  TYN L   LC   +V++A  ++  +   +   P +F Y  ++T  C+ G   +A 
Sbjct: 515 SRDSVTYNTLIDGLCKSKRVEDAAQLMDQM-IMEGLRPDKFTYNSLLTHFCKTGDIKKAA 573

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            ++  MT  G  PD  TY++LI GLC  G ++ A  +   ++          +N ++  L
Sbjct: 574 DIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQAL 633

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
            K  RT  ++ +F+ M++K + P+  TY I+  G+ +
Sbjct: 634 FKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCN 670



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 239/474 (50%), Gaps = 4/474 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ A   ++  VS+G +PD      L+  LCK    K A++V++ M+  G+ PD  +Y 
Sbjct: 288 RIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYN 347

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G +  A++++++M       N VTYN+++  LC    ++++ +    L  K
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++P+  T++ L++         +AM L +++  KG +P+  +YN+L+  LC   + EEA
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   +++   G   NVV YN L+   C   R EEA E+  EM+    S   VTYN LI  
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + + A +++D+M+    RP   +YN ++   C  G +      +  M    C P+
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPD 587

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L + LC  G+VQ A  +++S+  K        Y  VI +L ++ +T++A +L  
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFR 647

Query: 437 EMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           EM      PD+ TY  + RGLC   G I EA++  V M E    P+  +F  L  GLC  
Sbjct: 648 EMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTL 707

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTI--LVEGIAHQDELELSAEVLKELQLRQ 547
              D  +++  M++EK +       TI   ++    QD L     +L ++  R+
Sbjct: 708 SMDDTLVKLVDMIMEKAKFSEREISTIRGFLKIRKFQDALSTLGGILDDMYPRR 761



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 229/456 (50%), Gaps = 1/456 (0%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KPD      LL  L  ANK+K        MV   I  D S++  L+  LCK   V  A+ 
Sbjct: 165 KPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAIL 224

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           ++E+M  YG   +  T+ ++++G    GNL+ +L+  +++++ G      T + L+    
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K+  +  A+  + + +++G +P+  +YN L+ GLCK G  + A+     +   G +P++ 
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YN L+  LC  G  EEA ++L +M   D SP  VTYN +I SL    + D A ++   +
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKV 393
                 P   ++N +I  LC        +   ++M  + C+P+E TYN L   LC   K+
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +EA  +++ +     +     Y  +I   C+  +  +A ++  EM   G + DS TY++L
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I GLC    +E+A ++   M     +PD   +N+LL   CK+     + ++ Q M   G 
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            P+  TY  L+ G+     +++++ +L+ +Q++ +V
Sbjct: 585 NPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMV 620



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 216/455 (47%), Gaps = 6/455 (1%)

Query: 95  KPDVVQATN----LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVG 150
           +P+ V +++    +L  L KA   +   +V+E M  SG   D   +   V    K     
Sbjct: 90  QPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYD 149

Query: 151 YAMQLVEKMED-YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             + +V+ MED Y    +T  YN L+  L     L         ++++ +  +  T++ L
Sbjct: 150 EVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNIL 209

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           ++A  K   V  A+ +++++ + G  P+  ++  ++ G  + G  + A+R    +   G 
Sbjct: 210 IKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGC 269

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
               V+ N+L+   C +GR ++A   + E       P   TYN L+  L   G   HA++
Sbjct: 270 PCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAME 329

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLC 388
           V+D M+ G   P   +YN +I+ LC  G+++  VK LDQM  R C PN  TYN  ++ LC
Sbjct: 330 VVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLC 389

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
              +V EA  I + L +K        +  +I  LC       A  L  EM   G  PD +
Sbjct: 390 KENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEF 449

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY+ LI  LC    +EEAL +   ME      +V  +N L+ G CK++R + + E+F  M
Sbjct: 450 TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM 509

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +G   +  TY  L++G+     +E +A+++ ++
Sbjct: 510 ELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 202/426 (47%), Gaps = 2/426 (0%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P +S Y  ++  L K G+  Y  +++E+M+  G   +   +   V         ++ + 
Sbjct: 94  VPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVG 153

Query: 190 FLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
            +  +  +  + P+   Y+ LL        +         ++ +  + ++ ++N+L+  L
Sbjct: 154 IVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKAL 213

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CK  +   AI    ++PS G  P+  ++  +++     G  + A  +  +M       T 
Sbjct: 214 CKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTD 273

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VT N+LI      G+ D AL  + E V   FRP   +YN ++  LC  G     ++ +D 
Sbjct: 274 VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDA 333

Query: 369 MFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M      P+  TYN L + LC +G+++EA  I+  + ++  S     Y  +I+SLC++ +
Sbjct: 334 MLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENR 393

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A ++   +T  G  PD  T++SLI+GLC+    + A+++F  M+    +PD   +N 
Sbjct: 394 VDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNM 453

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+  LC SR+ + +L + + M   G   N   Y  L++G      +E + E+  E++L+ 
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513

Query: 548 VVSESA 553
           V  +S 
Sbjct: 514 VSRDSV 519



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 155/299 (51%), Gaps = 5/299 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +++++++A      + SKG  PDV    +L+  LC ++  K A+ + E M   G  PD  
Sbjct: 390 KENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEF 449

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LC    +  A+ L+++ME  G   N V YN+L+ G C    + ++ +  D +
Sbjct: 450 TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM 509

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+  ++ TY+ L++   K + V  A +L+D +I +G +P+  +YN LLT  CK G  
Sbjct: 510 ELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDI 569

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A    + + S G  P++V+Y  L+  LC  GR + A+ LL  +       T   YN +
Sbjct: 570 KKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPV 629

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG-----KVDLVVKCLDQ 368
           I +L    +T  A+++  EM+     P A +Y  +   LC+ G      VD  V+ +++
Sbjct: 630 IQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIER 688



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 142/361 (39%), Gaps = 79/361 (21%)

Query: 257 AIRFFRDLPSK--GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG----DRS----- 305
           A+R F +  SK   F P+   Y  +LR L   G +E    +L EM       DR      
Sbjct: 80  ALRVF-NWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIF 138

Query: 306 ---------------------------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
                                      P    YN+L+  L    K          MV+ R
Sbjct: 139 VESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR 198

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM------------ 386
            R   +++N +I  LC   +V   +  +++M      P+E T+  +              
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258

Query: 387 ------------------------LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
                                    C  G++ +A + IQ   ++     Q  Y  ++  L
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ G    A +++  M   G  PD YTY+SLI GLC  G IEEA++I   M   D  P+ 
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA 378

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA----HQDELELSAE 538
             +NA++  LCK  R D + E+ +++  KG +P+  T+  L++G+     H+  ++L  E
Sbjct: 379 VTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEE 438

Query: 539 V 539
           +
Sbjct: 439 M 439


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 244/456 (53%), Gaps = 1/456 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M ++G KPDVV    L+  LC+A++++ A+ ++E M S G+ PD +++T L+    ++G+
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+++  +M + G     VT N L+ G C LG +  +L ++ + I  G  P+  TY+ 
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            +    +   V  A+K++D ++ +G  P++ +YN+++  LCK G+ EEA      +  +G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P++ ++N L+ +LC   R EEA +L  ++     SP + T+NILI +L   G    AL
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 411

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++ +EM      P   +YN +I  LCS GK+   +  L  M    C  +  TYN +   L
Sbjct: 412 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 471

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   +++EA  +   +  +  S     +  +I  LC+  K   AF L+ +M   G  P++
Sbjct: 472 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNN 531

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+S++   C +G I++A +I   M    ++ DV  +  L+ GLCK+ RT ++L+V + 
Sbjct: 532 ITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRG 591

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M  KG  P    Y  +++ +  ++ +  +  + +E+
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 227/454 (50%), Gaps = 1/454 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H++  A L LE M S+G  PD    T L+    +   ++ A++V   M+  G      
Sbjct: 193 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N  CK G V  A+  +++    G+  + +TYN+ V GLC   ++  +L+ +D +
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+G  P+ FTY+ ++    K   +  A  +L+ ++ +G  P++ ++N L+  LC   R 
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+   R +  KG  P+V ++NIL+ +LC  G    A  L  EM     +P  VTYN L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   GK   AL +L +M       S  +YN II  LC + +++   +  DQM  +  
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N  T+N L   LC   K+ +AF +I  + ++        Y  ++T  C++G   +A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  MT  GF  D  TY +LI GLC  G  + AL++   M     +P    +N +L  L 
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +      +L +F+ M E G+ P+  TY I+  G+
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGL 646



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 223/436 (51%), Gaps = 2/436 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   +++ ++ G +PD +     +  LC+ + +  A+KVM++MV  G  PD  +Y 
Sbjct: 266 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 325

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VNCLCK G +  A  ++ +M D G   +  T+N+L+  LC    L ++L    ++  K
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ +T++ L+ A  K    H A++L +++   G  P+ V+YN L+  LC  G+  +A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   +D+ S G   + ++YN ++  LC + R EEA E+  +MD    S   +T+N LI  
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K D A  ++++M+    +P+  +YN I+   C +G +      L+ M     + +
Sbjct: 506 LCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC  G+ Q A  +++ +  K      + Y  V+ SL R+     A  L  
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFR 625

Query: 437 EMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           EM + G  PD+ TY  + RGLC   G I+EA +  + M +  + P+  +F  L  GL   
Sbjct: 626 EMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 685

Query: 496 RRTDLSLEVFQMMIEK 511
              D  +   ++++EK
Sbjct: 686 GMDDYFIRAIEIIMEK 701



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 197/407 (48%), Gaps = 36/407 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L +A   L +MV +G  PD+     L+  LC  N++++A+ +   +   G+ PD  
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LCK G+   A++L E+M++ G   + VTYN+L+  LC LG L ++L  L  +
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G   +  TY+ +++   K+  +  A ++ D +  +G   N +++N L+ GLCK+ + 
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      + S+G +PN ++YN +L   C +G  ++A ++L  M        +VTY  L
Sbjct: 513 DDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+T  ALKVL  M     RP+  +YNP+                L  +F R  
Sbjct: 573 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV----------------LQSLFRRN- 615

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY-QAFQ 433
                             +++A ++ + +           YK V   LCR G    +AF 
Sbjct: 616 -----------------NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 658

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE-IFVVMEEYDYK 479
            + EM   GF P+  ++  L  GL   G+ +  +  I ++ME+ D +
Sbjct: 659 FMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLR 705



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 176/393 (44%), Gaps = 35/393 (8%)

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           +G   +TV YN L+  L     +         +  +G+ P+  T++ L++A  +   V  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+ +L+++ ++G  P+  ++  L+ G  +EG  E A+R    +   G     V+ N+L+ 
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  GR E+A   + +       P  +TYN  +  L  +    HALKV+D MV+    P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQ 401
              +YN ++  LC  G+++     L+QM  R C P+  T                     
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT--------------------- 358

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                        +  +I +LC   +  +A  L  ++T  G +PD YT++ LI  LC  G
Sbjct: 359 -------------FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
               AL +F  M+     PD   +N L+  LC   +   +L++ + M   G   +  TY 
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +++G+  +  +E + EV  ++ L Q +S +A+
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDL-QGISRNAI 497


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 254/520 (48%), Gaps = 46/520 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + DA   L+ M  +G          +L   C+    + A++ ++++ + G   D+ +   
Sbjct: 124 IADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNL 183

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V+ +C++G V   ++L+ K+  +G   + V+YN++++GLCM    +   + +  +++ G
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243

Query: 199 LVPNAFTYSFLLEAAYKERG-----VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
             PN  T++ L+  AY  R      VH A+  + +    G  P+L  Y  ++ G+CK+G 
Sbjct: 244 CPPNVATFNTLI--AYLCRNGLFEQVHEALSQMPE---HGCTPDLRMYATIIDGICKDGH 298

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            E A      +PS G +PNVV YN +L+ LC   RWEEA +LLAEM   D     VT+NI
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 358

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+     +G  D  +++L++M++    P   +Y  +I   C EG VD  V  L  M    
Sbjct: 359 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418

Query: 374 CKPNEGTYN----GLA--------------------------------MLCGVGKVQEAF 397
           CKPN  +Y     GL                                  +C  G V++A 
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +++ +     S     Y  VI  L + GKT +A +LL  M   G TP++  YSS+   L
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
             EG  ++ +++F  +++   + D   +NA++  LCK   TD +++ F  M+  G MPNE
Sbjct: 539 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 598

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
           +TYTIL+ G+A +  +  + ++L EL  R+ V +  V   
Sbjct: 599 STYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRHF 638



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 222/443 (50%), Gaps = 7/443 (1%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           + L+  LC A +   A + ++   ++G      +Y  ++   C+ G V  A +L   +  
Sbjct: 48  SALIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
              P N  TY  +VR LC  G +  +L  LD +  +G          +LEAA +  G  +
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A++ L  + AKG   +  + N++++ +C++G  +E +   R LPS G EP++VSYN +L+
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LCM  RW++  EL+ EM      P + T+N LI  L  +G  +   + L +M +    P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAII 400
               Y  II  +C +G  ++    L +M     KPN   YN  L  LC   + +EA  ++
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +  +        +  ++   C+ G   +  +LL +M ++G  PD  TY+++I G C E
Sbjct: 342 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 401

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           GL++EA+ +   M     KP+  ++  +L GLC++ R   + E+   MI++G +PN  T+
Sbjct: 402 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 461

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
             L+  +  +  +E + E+LK++
Sbjct: 462 NTLINFMCKKGLVEQAIELLKQM 484



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 60/138 (43%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K  +A   L  M++KG  P+ +  +++   L +  +  K I++ + +  + + 
Sbjct: 501 DGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR 560

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            DA+ Y  +++ LCK+     A+     M   G   N  TY  L+RGL   G + ++   
Sbjct: 561 SDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDL 620

Query: 191 LDRLIQKGLVPNAFTYSF 208
           L  L  +  V       F
Sbjct: 621 LSELCSRRAVRKHLVRHF 638


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 241/483 (49%), Gaps = 1/483 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     RM+     P + +   LL  + K       + + + M S GI PD  + T 
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N  C    V +A+ ++ K+   G+  +T T+ +LVRGLC++G + ++L   D+++ +G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K+R +  A+ L  ++IAKG  P++ +YN L+  LC     +   
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
               ++      PNVVS NI++ +LC EG+  EA++++  M  G   P +VTY  L+   
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + D A+KV D MV+     +  SYN +I   C   ++D  +   ++M  +   PN 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ L   LC VG++Q+A A+   +           Y  ++  LC+  +  +A  LL  
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +      PD   Y+  I G+C  G +E A ++F  +     +PDV   N ++ GLCK   
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
            D + ++F+ M E G + N  TY  + +G+   ++   + ++L+E+  R   ++ +   L
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516

Query: 558 VMQ 560
           +++
Sbjct: 517 LVK 519



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 223/462 (48%), Gaps = 35/462 (7%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++ A   L +++  GH+PD    T L+  LC   K+ +A+ V + MV  G  P+  +Y
Sbjct: 105 NRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTY 164

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N LCK   +  A+ L  +M   G   +  TYNSL+  LC L         L+ +++
Sbjct: 165 GTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVK 224

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             ++PN  + + +++A  KE  V  A  ++D +I  G +P++V+Y  L+ G C     +E
Sbjct: 225 SKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDE 284

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++ F  +   G   NVVSYN L+   C   R ++A  L  EM   +  P  +TY+ LI 
Sbjct: 285 AVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIH 344

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L + G+   A+ + +EMV     P+  +Y+ ++  LC                HR    
Sbjct: 345 GLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKN--------------HR---- 386

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
                           + EA A+++++         + Y   I  +CR G    A  L  
Sbjct: 387 ----------------LAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFS 430

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            +   G  PD +T++ +IRGLC  GL++EA ++F  M+E     +   +N +  GL ++ 
Sbjct: 431 NLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNN 490

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           +T  ++++ + M+ +G   + +T  +LV+ ++  D L+ S +
Sbjct: 491 KTSRAIQLLEEMLARGFSADVSTTALLVKMLS-DDGLDQSVK 531



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 188/396 (47%), Gaps = 34/396 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +L +A      M++KG  PD+    +L++ LC   + K    ++  MV S I+P+  
Sbjct: 173 KDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S   +V+ LCK+G V  A  +V+ M   G   + VTY +L+ G C+   ++++++  D +
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G V N  +Y+ L+    K + +  AM L +++  +   PN ++Y+ L+ GLC  GR 
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++AI  F ++ + G  PN+V+Y+ILL  LC   R  EA  LL  ++G +  P +  YNI 
Sbjct: 353 QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIA 412

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +   G  + A  +   +     +P   ++N +I  LC  G +D   K   +M    C
Sbjct: 413 IDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGC 472

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             N  TYN                                   +   L +  KT +A QL
Sbjct: 473 LRNGCTYN----------------------------------TITQGLLQNNKTSRAIQL 498

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           L EM   GF+ D  T + L++ L  +GL +   +I 
Sbjct: 499 LEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 159/294 (54%), Gaps = 1/294 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   ++ M+  G +PDVV    L+   C  ++M +A+KV +MMV +G +
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  SY  L+N  CK   +  AM L E+M       NT+TY++L+ GLC +G L  ++  
Sbjct: 299 CNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIAL 358

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + ++  G +PN  TYS LL+   K   +  AM LL  I      P++  YN+ + G+C+
Sbjct: 359 FNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCR 418

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  E A   F +L  +G +P+V ++NI++R LC  G  +EA++L  EMD         T
Sbjct: 419 AGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCT 478

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           YN +   L  + KT  A+++L+EM+   F  +  S   ++ ++ S+  +D  VK
Sbjct: 479 YNTITQGLLQNNKTSRAIQLLEEMLARGFS-ADVSTTALLVKMLSDDGLDQSVK 531


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 243/492 (49%), Gaps = 36/492 (7%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV     P + +   LL  + K  K    I + E M   GI  +  +Y  L+NC C++  
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+ L+ KM   GY  + VT +SL+ G C    ++ ++  +D++++ G  P+  T++ 
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG---------------- 252
           L+   +       A+ L+D ++ +G +PNLV+Y V++ GLCK G                
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 253 -------------------RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
                                ++A+  F+++ +KG  PNVV+Y+ L+  LC  GRW +A+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +LL++M     +P +VT+N LI +    GK   A K+ D+M+K    P   +YN +I   
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C   ++D   +  + M  + C P+  TYN L    C   +V++   + + + ++      
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  +I  L   G    A ++  +M   G  PD  TYS L+ GLC  G +E+ALE+F  
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M++ + K D+  +  ++ G+CK+ + D   ++F  +  KG  PN  TY  ++ G+  +  
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480

Query: 533 LELSAEVLKELQ 544
           L+ +  +LK+++
Sbjct: 481 LQEAYALLKKMK 492



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 241/492 (48%), Gaps = 1/492 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++ A   L +M+  G++P +V  ++LL   C   ++  A+ +++ MV  G  PD  
Sbjct: 57  RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++ L        A+ LV++M   G   N VTY  +V GLC  G+++ +   L+++
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               +  +   ++ ++++  K R V  A+ L  ++  KG +PN+V+Y+ L++ LC  GR 
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A +   D+  K   PN+V++N L+ +   EG++ EA +L  +M      P I TYN L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     H + D A ++ + MV     P   +YN +I   C   +V+   +   +M HR  
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TY  L   L   G    A  + + + +         Y  ++  LC  GK  +A +
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M K     D Y Y+++I G+C  G +++  ++F  +     KP+V  +N ++ GLC
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
             R    +  + + M E G +P+  TY  L+       +   SAE+++E++  + V +++
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 536

Query: 554 VERLVMQYDFEG 565
              LV     +G
Sbjct: 537 TIGLVANMLHDG 548



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 220/460 (47%), Gaps = 2/460 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA   +++MV  G++PD +  T L++ L   NK  +A+ +++ MV  G  P+  +Y 
Sbjct: 95  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VN LCK+G++  A  L+ KME      + V +N+++  LC   +++ +L     +  K
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  TYS L+           A +LL D+I K   PNLV++N L+    KEG+  EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +   D+  +  +P++ +YN L+   CM  R ++A ++   M   D  P + TYN LI  
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                + +   ++  EM          +Y  +I  L  +G  D   K   QM      P+
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ L   LC  GK+++A  +   +   +       Y  +I  +C+ GK    + L  
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            ++  G  P+  TY+++I GLC + L++EA  +   M+E    PD   +N L+    +  
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
               S E+ + M    +   + +   LV  + H   L+ S
Sbjct: 515 DKAASAELIREM-RSCRFVGDASTIGLVANMLHDGRLDKS 553



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 147/320 (45%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   L  M+ K   P++V    L+    K  K  +A K+ + M+   I PD  +Y 
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  C    +  A Q+ E M       +  TYN+L++G C    +    +    +  +
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLV +  TY+ L++  + +     A K+   +++ G  P++++Y++LL GLC  G+ E+A
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +     + ++  Y  ++  +C  G+ ++  +L   +      P +VTYN +I  
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L        A  +L +M +    P + +YN +I     +G      + + +M   R   +
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 534

Query: 378 EGTYNGLAMLCGVGKVQEAF 397
             T   +A +   G++ ++F
Sbjct: 535 ASTIGLVANMLHDGRLDKSF 554



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 34/221 (15%)

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
           MVK R  PS   +N +++ +    K DLV+   ++M                        
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM------------------------ 36

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
                  Q LG   N      Y  +I   CR+ +   A  LL +M K G+ P   T SSL
Sbjct: 37  -------QRLGISHNLYT---YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 86

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + G C    I +A+ +   M E  Y+PD   F  L+ GL    +   ++ +   M+++G 
Sbjct: 87  LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 146

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            PN  TY ++V G+  + +++L+  +L +++  ++ ++  +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 236/455 (51%), Gaps = 1/455 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M+ KG K DVV  + ++  LCKA  + +A  V++ M+  G+ PD  +Y  +++ LCK
Sbjct: 222 LQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK 281

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A  +++ M D G   + VTYN+++ GLC    ++++   L  +I K + P+  T
Sbjct: 282 AQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQT 341

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+            ++ L+++ A+G  P++V+Y++LL  LCK G+  EA + F  + 
Sbjct: 342 YNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMI 401

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG +PNV  Y ILL      G   +  +LL  M     SP    +NI++ + A     D
Sbjct: 402 RKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMID 461

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+ +   M +    P   +Y  +I  LC  G+VD  V   +QM +    PN   +N L 
Sbjct: 462 EAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLV 521

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC V + ++A  +   + ++       F+  ++ +LC +G+   A +L+  M + G  
Sbjct: 522 YGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVR 581

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  +Y++LI G C+ G  +EA ++  VM     KPD+ +++ LL G CK+ R D +  +
Sbjct: 582 PNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCL 641

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           F+ M+ KG  P   TY+ +++G+ H      + E+
Sbjct: 642 FREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKEL 676



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 229/476 (48%), Gaps = 11/476 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-- 128
           D +  D  ++   + L RM   G  P+VV    LL  LC   ++++A++++  M   G  
Sbjct: 137 DAKRVDEAMD---ILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGG 193

Query: 129 -IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
              P+  +Y  +++ LCK   V  A  +++ M D G   + VTY++++ GLC    ++++
Sbjct: 194 NCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRA 253

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
              L  +I KG+ P+  TY+ +++   K + V  A  +L  +I KG KP++V+YN ++ G
Sbjct: 254 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 313

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           LCK    + A    + +  K  +P++ +YN L+      G W+E    L EM      P 
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           +VTY++L+  L  +GK   A K+   M++   +P+   Y  ++    + G +  +   LD
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433

Query: 368 QMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
            M      PN   +N   +LC   K   + EA  I   +     S     Y  +I +LC+
Sbjct: 434 LMVANGISPNNYIFN--IVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCK 491

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G+   A     +M   G TP+S  ++SL+ GLC     E+A E+F  M +   +P+V  
Sbjct: 492 LGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVF 551

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           FN ++  LC   +  ++  +   M   G  PN  +Y  L+ G       + +A++L
Sbjct: 552 FNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLL 607



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 221/466 (47%), Gaps = 5/466 (1%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F ++ R  S   +PD+   + L    C+  +++       +++ +G   +      L+N 
Sbjct: 75  FNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNG 134

Query: 143 LCKKGNVGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG--- 198
           LC    V  AM  L+ +M ++G   N V+ N+L++GLC    + ++L+ L  + + G   
Sbjct: 135 LCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGN 194

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY+ +++   K + V  A  +L  +I KG K ++V+Y+ ++ GLCK    + A 
Sbjct: 195 CTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAE 254

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
              + +  KG +P+VV+YN ++  LC     + A  +L  M      P +VTYN +I  L
Sbjct: 255 GVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL 314

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
                 D A  VL  M+    +P   +YN +I    S G+   VV+ L++M+ R   P+ 
Sbjct: 315 CKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDV 374

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ L   LC  GK  EA  I   +  K        Y  ++     +G       LL  
Sbjct: 375 VTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDL 434

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G +P++Y ++ ++     + +I+EA+ IF  M ++   PDV  +  L+  LCK  R
Sbjct: 435 MVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGR 494

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            D ++  F  MI  G  PN   +  LV G+   D  E + E+  E+
Sbjct: 495 VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 212/450 (47%), Gaps = 34/450 (7%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           +LE M ++G  PDVV  + LL  LCK  K  +A K+   M+  GI P+ + Y  L++   
Sbjct: 361 RLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYA 420

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
            +G +     L++ M   G   N   +N ++        +++++    R+ Q GL P+  
Sbjct: 421 ARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVV 480

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY  L++A  K   V  A+   + +I  G  PN V +N L+ GLC   R E+A   F ++
Sbjct: 481 TYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +G  PNVV +N ++ +LC EG+   A  L+  M+     P +++YN LIG     G+T
Sbjct: 541 WDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRT 600

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           D A ++LD MV    +P   SY+ ++   C  G++D       +M  +   P   TY+  
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYS-- 658

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                         I+Q L + +  S                   +A +L   M K G  
Sbjct: 659 -------------TILQGLFHTRRFS-------------------EAKELYLNMIKSGQQ 686

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            D YTY+ ++ GLC    ++EA +IF  +   D +P++  F  ++  L K  R   ++++
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           F  +   G +PN  TY I+++ I  +  L+
Sbjct: 747 FASIPSHGLVPNVVTYCIMMKNIIQEGLLD 776



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 161/327 (49%), Gaps = 1/327 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA L+  +M++ G  P+ V   +L+Y LC  ++ +KA ++   M   G+ P+   + 
Sbjct: 494 RVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFN 553

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC +G V  A +L++ ME  G   N ++YN+L+ G C+ G  +++ Q LD ++  
Sbjct: 554 TIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV 613

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+  +Y  LL    K   +  A  L  +++ KG  P  V+Y+ +L GL    R  EA
Sbjct: 614 GLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEA 673

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              + ++   G + ++ +YNI+L  LC     +EA ++   +   D  P I+T+ I+I  
Sbjct: 674 KELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDV 733

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+   A+ +   +      P+  +Y  ++  +  EG +D        M    C P+
Sbjct: 734 LFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPD 793

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSL 403
               N +   L G G++  A A +  +
Sbjct: 794 SVMLNAIIRSLLGRGEIMRAGAYLSKI 820



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 178/400 (44%), Gaps = 34/400 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A     RM   G  PDVV    L+  LCK  ++  A+     M++ G+ P++  +  
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNS 519

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV  LC       A +L  +M D G   N V +N+++  LC  G +  + + +D + + G
Sbjct: 520 LVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVG 579

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + PN  +Y+ L+           A +LLD +++ G KP+L+SY+ LL G CK GR + A 
Sbjct: 580 VRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  KG  P  V+Y+ +L+ L    R+ EA EL   M    +   I TYNI++  L
Sbjct: 640 CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
                 D A K+   +     RP+  ++  +I  L   G+        D M         
Sbjct: 700 CKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKK------DAM--------- 744

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
                           + FA I S G   N      Y  ++ ++ ++G   +   L   M
Sbjct: 745 ----------------DLFASIPSHGLVPNVVT---YCIMMKNIIQEGLLDEFDNLFLAM 785

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
            K G TPDS   +++IR L   G I  A      ++E ++
Sbjct: 786 EKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNF 825



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 157/355 (44%), Gaps = 11/355 (3%)

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK---EGRTEEAIRFFRDLP---SKGFEP 271
           G+  A+KL D+++      ++ ++N LL  + +      +E A+  F  +    S    P
Sbjct: 29  GIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRP 88

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           ++ +Y+IL    C  GR E        +         V  N L+  L    + D A+ +L
Sbjct: 89  DLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDIL 148

Query: 332 -DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR---RCKPNEGTYNGLA-M 386
              M +    P+  S N ++  LC+E +V+  ++ L  M       C PN  TYN +   
Sbjct: 149 LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDG 208

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC    V  A  ++Q + +K        Y  +I  LC+     +A  +L  M   G  PD
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 268

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+++I GLC    ++ A  +   M +   KPDV  +N ++ GLCK++  D +  V Q
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            MI+K   P+  TY  L+ G     E +     L+E+  R +  +     L++ Y
Sbjct: 329 HMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 118/250 (47%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + ++A   L+ MVS G KPD++    LL   CK  ++  A  +   M+  G+ P A +Y+
Sbjct: 599 RTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYS 658

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  L        A +L   M   G   +  TYN ++ GLC    ++++ +    L  K
Sbjct: 659 TILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK 718

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L PN  T++ +++  +K      AM L   I + G  PN+V+Y +++  + +EG  +E 
Sbjct: 719 DLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEF 778

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +   G  P+ V  N ++RSL   G    A   L+++D  + S    T ++LI  
Sbjct: 779 DNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISL 838

Query: 318 LAYHGKTDHA 327
            +     +HA
Sbjct: 839 FSREEYKNHA 848


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 246/477 (51%), Gaps = 12/477 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + H+L  A L LE M + G KPD +  T L+    +   +  A+K+ + M+  G +    
Sbjct: 170 KAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNV 229

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S   LVN  CK+G V  A++ V ++ + G+  + VT+NSLV G C +GN+N +L  +D +
Sbjct: 230 SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFM 289

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+KG  P+ +TY+ L+    K      A+++L  +I +   PN V+YN L++ LCKE   
Sbjct: 290 IEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEI 349

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A    R L SKG  P+V ++N L++ LC+    + A E+  EM      P   TY+IL
Sbjct: 350 EAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSIL 409

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL Y  +   AL +L EM       +A  YN +I  LC   +++   +  DQM     
Sbjct: 410 IDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGV 469

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
             +  TYN L   LC   +V+EA  ++  +   +   P +F Y  ++T  CR G   +A 
Sbjct: 470 SRSSVTYNTLIDGLCKNKRVEEASQLMDQM-IMEGLKPDKFTYNSLLTYFCRVGDIEKAG 528

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLL 490
            ++  M   G  PD +TY +LI GLC  G ++ A ++   V M+     P    +N ++ 
Sbjct: 529 DIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHA--YNPVIQ 586

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH-----QDELELSAEVLKE 542
            L   +RT   + +F+ M+EK   P+  T+ I+  G+ +     Q+ ++ + E+L++
Sbjct: 587 ALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEK 643



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 229/450 (50%), Gaps = 2/450 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ +A   +  +  +G  PD V   +L+   C+   +  A+ +++ M+  G  PD  
Sbjct: 240 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 299

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ +CK G    A++++++M       NTVTYN+L+  LC    +  +      L
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KGL+P+  T++ L++     +    AM++ +++  KG KP+  +Y++L+  LC E R 
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 419

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+   +++ S G   N V YN L+  LC   R E+A E+  +M+    S + VTYN L
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L  + + + A +++D+M+    +P   +YN ++   C  G ++     +  M    C
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGC 539

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+  TY  L   LC  G+V  A  +++S+  K        Y  VI +L  + +T +  +
Sbjct: 540 EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           L  EM +    PD+ T+  + RGLC   G I+EA++  V M E    P+  +F  L  GL
Sbjct: 600 LFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL 659

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           C     D  +E+  M++EK QM    T  I
Sbjct: 660 CSLSMEDTLIELINMVMEKAQMSERETSMI 689



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 249/486 (51%), Gaps = 1/486 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D+KL    +   +MV++G   DV     L+  LCKA++++ AI ++E M + G+ PD  +
Sbjct: 136 DNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEIT 195

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +T L+    ++G++  A+++ ++M  YG     V+   LV G C  G + ++L+F+  + 
Sbjct: 196 FTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVS 255

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++G  P+  T++ L+    +   V+ A+ ++D +I KG  P++ +YN L++G+CK G  E
Sbjct: 256 EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFE 315

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +AI   + +  +   PN V+YN L+ +LC E   E A +L   +      P + T+N LI
Sbjct: 316 KAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLI 375

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L      D A+++ +EM     +P   +Y+ +I  LC E ++   +  L +M    C 
Sbjct: 376 QGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCA 435

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            N   YN L   LC   ++++A  I   +     S     Y  +I  LC+  +  +A QL
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQL 495

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + +M   G  PD +TY+SL+   C  G IE+A +I   M     +PD+  +  L+ GLC+
Sbjct: 496 MDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCR 555

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           + R D++ ++ + +  KG +     Y  +++ +  +   +    + +E+  +    ++  
Sbjct: 556 AGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALT 615

Query: 555 ERLVMQ 560
            ++V +
Sbjct: 616 HKIVFR 621



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 240/458 (52%), Gaps = 1/458 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G KPD       L  L + NK+K    +   MV+ GI+ D S++  L+  LCK   +  A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + ++E+M ++G   + +T+ +L++G    G+LN +L+   +++  G +    +   L+  
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             KE  V  A++ + ++  +G  P+ V++N L+ G C+ G   +A+     +  KGF+P+
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V +YN L+  +C  G +E+A E+L +M   + SP  VTYN LI +L    + + A  +  
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
            +V     P   ++N +I  LC     D+ ++  ++M ++ CKP+E TY+ L   LC   
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           +++EA  +++ + +   +     Y  +I  LC+  +   A ++  +M   G +  S TY+
Sbjct: 418 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 477

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LI GLC    +EEA ++   M     KPD   +N+LL   C+    + + ++ Q M   
Sbjct: 478 TLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASN 537

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           G  P+  TY  L+ G+     +++++++L+ +Q++ +V
Sbjct: 538 GCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIV 575



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 232/488 (47%), Gaps = 37/488 (7%)

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV---------- 140
           S  H P     T LL  L +++       +++ + SSG IP+A+++  L+          
Sbjct: 49  STTHHPLPPNET-LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIE 107

Query: 141 -----------------------NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
                                  N L +   +     L  KM + G   +  T+N L++ 
Sbjct: 108 NLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKA 167

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           LC    L  ++  L+ +   GL P+  T++ L++   +E  ++ A+K+   ++  G    
Sbjct: 168 LCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLT 227

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
            VS  VL+ G CKEGR EEA+RF  ++  +GF P+ V++N L+   C  G   +A +++ 
Sbjct: 228 NVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVD 287

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
            M      P + TYN LI  +   G+ + A+++L +M+     P+  +YN +I+ LC E 
Sbjct: 288 FMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKEN 347

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE-AFAIIQSLGNKQNSSPQEF-Y 415
           +++        +  +   P+  T+N L     + K Q+ A  + + + NK    P EF Y
Sbjct: 348 EIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK-GCKPDEFTY 406

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I SLC + +  +A  LL EM   G   ++  Y++LI GLC    IE+A EIF  ME 
Sbjct: 407 SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMEL 466

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
                    +N L+ GLCK++R + + ++   MI +G  P++ TY  L+       ++E 
Sbjct: 467 LGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEK 526

Query: 536 SAEVLKEL 543
           + ++++ +
Sbjct: 527 AGDIVQTM 534



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 201/462 (43%), Gaps = 80/462 (17%)

Query: 162 YGYPT-----NTVTYNSLVRGLCMLGNLNQSLQF------LDRLIQKGLVPNAFTYSFLL 210
           + +PT     ++ T++ L     +L  L QS  F      L +L   G +PNA T++ L+
Sbjct: 38  FKFPTLCTTPSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLI 97

Query: 211 EAAYKERGVHAAMKLLDD---------------------------------IIAKGGKPN 237
           ++      +   +K+L++                                 ++ +G   +
Sbjct: 98  QSFTNFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLD 157

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN-------------------- 277
           + ++NVL+  LCK  +   AI    ++ + G +P+ +++                     
Sbjct: 158 VSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKK 217

Query: 278 ---------------ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
                          +L+   C EGR EEA   + E+     SP  VT+N L+      G
Sbjct: 218 QMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIG 277

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             + AL ++D M++  F P   +YN +I+ +C  G+ +  ++ L QM  R C PN  TYN
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYN 337

Query: 383 GL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L + LC   +++ A  + + L +K        +  +I  LC       A ++  EM   
Sbjct: 338 TLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK 397

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD +TYS LI  LC E  ++EAL +   ME      +   +N L+ GLCKSRR + +
Sbjct: 398 GCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDA 457

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            E+F  M   G   +  TY  L++G+     +E +++++ ++
Sbjct: 458 EEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQM 499


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 243/505 (48%), Gaps = 36/505 (7%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D KL+DA      MV     P +V+   LL  + K NK    I + E M +  I  D  S
Sbjct: 42  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 101

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L+NC C++  +  A+ ++ KM   GY  + VT +SL+ G C    +++++  +D++ 
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
                PN  T++ L+   +       A+ L+D ++A+G +P+L +Y  ++ GLCK G  +
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221

Query: 256 -----------------------------------EAIRFFRDLPSKGFEPNVVSYNILL 280
                                              +A+  F ++ +KG  PNVV+YN L+
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           R LC  GRW +A+ LL++M     +P +VT++ LI +    GK   A K+ DEM+K    
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
           P   +Y+ +I   C   ++D      + M  + C PN  TYN L    C   +V+E   +
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 401

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            + +  +        Y  +I  L + G    A ++  +M   G  PD  TYS L+ GLC 
Sbjct: 402 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 461

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G +E+AL +F  +++   +PD+  +N ++ G+CK+ + +   ++F  +  KG  PN   
Sbjct: 462 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 521

Query: 520 YTILVEGIAHQDELELSAEVLKELQ 544
           YT ++ G   +   E +  + +E++
Sbjct: 522 YTTMISGFCRKGLKEEADALFREMK 546



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 202/386 (52%), Gaps = 1/386 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +K ++A   ++RMV++G +PD+     ++  LCK   +  A+ +++ M    I  D   Y
Sbjct: 183 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 242

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T +++ LC   NV  A+ L  +M++ G   N VTYNSL+R LC  G  + + + L  +I+
Sbjct: 243 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 302

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           + + PN  T+S L++A  KE  +  A KL D++I +   P++ +Y+ L+ G C   R +E
Sbjct: 303 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 362

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F  + SK   PNVV+YN L++  C   R EE  EL  EM         VTYN LI 
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 422

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G  D A K+  +MV     P   +Y+ ++  LC  GK++  +   + +   + +P
Sbjct: 423 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 482

Query: 377 NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TYN  +  +C  GKV++ + +  SL  K        Y  +I+  CRKG   +A  L 
Sbjct: 483 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 542

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEG 461
            EM + G  P+S TY++LIR    +G
Sbjct: 543 REMKEDGTLPNSGTYNTLIRARLRDG 568



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 240/492 (48%), Gaps = 1/492 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L  A   L +M+  G++PD+V  ++LL   C   ++ +A+ +++ M      P+  
Sbjct: 111 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 170

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ L        A+ L+++M   G   +  TY ++V GLC  G+++ +L  L ++
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +  +  +   Y+ +++A    + V+ A+ L  ++  KG +PN+V+YN L+  LC  GR 
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A R   D+  +   PNVV+++ L+ +   EG+  EA +L  EM      P I TY+ L
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     H + D A  + + M+     P+  +YN +I   C   +V+  ++   +M  R  
Sbjct: 351 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N  TYN L   L   G    A  I + + +         Y  ++  LC+ GK  +A  
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 470

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   + K    PD YTY+ +I G+C  G +E+  ++F  +     KP+V  +  ++ G C
Sbjct: 471 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 530

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +    + +  +F+ M E G +PN  TY  L+       +   SAE++KE++    V +++
Sbjct: 531 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 590

Query: 554 VERLVMQYDFEG 565
              +V+    +G
Sbjct: 591 TISMVINMLHDG 602



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 1/271 (0%)

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L R++ ++ + ++A +L  EM      P+IV +N L+ ++A   K D  + + + M   R
Sbjct: 35  LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 94

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
                 SYN +I   C   ++ L +  L +M     +P+  T + L    C   ++ EA 
Sbjct: 95  ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 154

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           A++  +   +       +  +I  L    K  +A  L+  M   G  PD +TY +++ GL
Sbjct: 155 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 214

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G I+ AL +   ME+   + DV  +  ++  LC  +  + +L +F  M  KG  PN 
Sbjct: 215 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 274

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            TY  L+  + +      ++ +L ++  R++
Sbjct: 275 VTYNSLIRCLCNYGRWSDASRLLSDMIERKI 305



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 34/232 (14%)

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  EMV+ R  PS   +N +++ +    K DLV+   ++M + R   +  +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L                                  I   CR+ +   A  +L +M K G
Sbjct: 104 IL----------------------------------INCFCRRSQLPLALAVLGKMMKLG 129

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           + PD  T SSL+ G C    I EA+ +   M   +Y+P+   FN L+ GL    +   ++
Sbjct: 130 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 189

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +   M+ +G  P+  TY  +V G+  + +++L+  +LK+++  ++ ++  +
Sbjct: 190 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++MVS G  PD++  + LL  LCK  K++KA+ V E +  S + PD  +Y  ++  +CK
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496

Query: 146 KGNV--GY---------------------------------AMQLVEKMEDYGYPTNTVT 170
            G V  G+                                 A  L  +M++ G   N+ T
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 556

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           YN+L+R     G+   S + +  +   G V +A T S ++   +  R   + +++L
Sbjct: 557 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 612


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 237/472 (50%), Gaps = 7/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + ++L       E +V +GH PDVV    L+  LCKA  +++A ++   M S G +P+  
Sbjct: 93  KSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVV 152

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLD 192
           +Y+ L+N LCK G +  A +L+++M         N +TYNS + GLC      ++ + + 
Sbjct: 153 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 212

Query: 193 RLIQKGL--VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            L    L   P+  T+S L++   K      A    DD+IA G  PN+V+YN L+ GLCK
Sbjct: 213 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCK 270

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + E A      +  KG  P+V++Y++L+ + C   R +EA ELL  M     +P +VT
Sbjct: 271 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 330

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +N +I  L    ++  A ++  ++      P   ++N +IA  C  G  +      ++M 
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMV 390

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +  +P+  T+  L   LC  G+V+ A  I+  +GN         Y  ++  LC+ G+  
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIE 450

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +  + L EM   G  P+S TY SL+  LC     ++AL++   ++ + + PD   +N L+
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILV 510

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
            GL KS +T+ ++ V + M+ KG  P+  T+     G+     L  + E+L+
Sbjct: 511 DGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLR 562



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 238/462 (51%), Gaps = 11/462 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P +V    ++  LCK+N++   +++ E +V  G  PD  +Y  L++ LCK G+
Sbjct: 72  MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGD 131

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG--LVPNAFTY 206
           +  A +L   M   G   N VTY+ L+ GLC +G ++++ + +  + +K   ++PN  TY
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGK----PNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           +  L+   K+     A +L+  +  + G     P+ V+++ L+ GLCK G+T+EA     
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSL--RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--D 247

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           D+ + G+ PNVV+YN L+  LC   + E A+ ++  M     +P ++TY++L+ +     
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + D AL++L  M      P+  ++N II  LC   +     +   Q+++R   P++ T+N
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367

Query: 383 GL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L A  C  G  ++A A+ + +  K        +  +I  LC+ G+   A  +L  M   
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P+  TY+ L+ GLC  G IEE  E    M      P+   + +L+  LC++ RTD +
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDA 487

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L++   +   G  P+  TY ILV+G+    + E +  VL+E+
Sbjct: 488 LQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 529



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 219/447 (48%), Gaps = 8/447 (1%)

Query: 104 LLYDLCKANKMKKAIKVME-MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           +L  LC+A +  +A+++    M   G+ P   +Y  ++N LCK   +G  M+L E++   
Sbjct: 51  VLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKR 110

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+  + VTYN+L+  LC  G+L ++ +    +  +G VPN  TYS L+    K   +  A
Sbjct: 111 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEA 170

Query: 223 MKLLDDIIAKGGK--PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF--EPNVVSYNI 278
            +L+ ++  K     PN+++YN  L GLCK+  T EA    R L        P+ V+++ 
Sbjct: 171 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 230

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+  LC  G+ +EA     +M  G   P +VTYN L+  L    K + A  +++ MV   
Sbjct: 231 LIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG 288

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
             P   +Y+ ++   C   +VD  ++ L  M  R C PN  T+N +   LC   +  EAF
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 348

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            I   + N+     +  +  +I   C+ G   QA  L  EM      PD  T+ +LI GL
Sbjct: 349 QIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGL 408

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G +E A +I  +M      P+V  +N L+ GLCKS R +   E  + M+  G +P  
Sbjct: 409 CKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPES 468

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQ 544
            TY  LV  +      + + +++ +L+
Sbjct: 469 MTYGSLVYALCRASRTDDALQLVSKLK 495



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 221/425 (52%), Gaps = 8/425 (1%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVE-KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           + Y  ++  LC+ G    A+++   +M   G     VTYN+++ GLC    L   ++  +
Sbjct: 46  ADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFE 105

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            L+++G  P+  TY+ L+++  K   +  A +L   + ++G  PN+V+Y+VL+ GLCK G
Sbjct: 106 ELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVG 165

Query: 253 RTEEAIRFFRDLPSKGFE--PNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDR-SPTI 308
           R +EA    +++  K  +  PN+++YN  L  LC +    EA EL+  + DG  R SP  
Sbjct: 166 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 225

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VT++ LI  L   G+TD A    D+M+ G + P+  +YN ++  LC   K++     ++ 
Sbjct: 226 VTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIES 283

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M  +   P+  TY+ L    C   +V EA  ++  + ++  +     +  +I  LC+  +
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
           + +AFQ+  ++      PD  T++ LI G C  G  E+A  +F  M   + +PDV  F A
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+ GLCK+ + + + ++  +M   G  PN  TY +LV G+     +E   E L+E+    
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463

Query: 548 VVSES 552
            V ES
Sbjct: 464 CVPES 468



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 217/432 (50%), Gaps = 38/432 (8%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTYLVNCLCKKGNVGYAM 153
           P+++   + L  LCK +   +A ++M  +      + PD  +++ L++ LCK G    A 
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 245

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
              + M   GY  N VTYN+LV GLC    + ++   ++ ++ KG+ P+  TYS L++A 
Sbjct: 246 N--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 303

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K   V  A++LL  + ++G  PN+V++N ++ GLCK  R+ EA +    + ++   P+ 
Sbjct: 304 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDK 363

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V++NIL+   C  G +E+A+ L  EM   +  P ++T+  LI  L   G+ + A  +LD 
Sbjct: 364 VTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDL 423

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
           M      P+  +YN ++  LC  G+++   + L++M    C P   TY  L         
Sbjct: 424 MGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSL--------- 474

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
                                    + +LCR  +T  A QL+ ++  +G+ PD+ TY+ L
Sbjct: 475 -------------------------VYALCRASRTDDALQLVSKLKSFGWDPDTVTYNIL 509

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + GL   G  E+A+ +   M    ++PD   F A   GL +S     ++E+ ++++ KG 
Sbjct: 510 VDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGM 569

Query: 514 MPNETTYTILVE 525
           +P+ TT + +++
Sbjct: 570 LPDATTCSSILD 581



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 163/307 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  A   +E MV KG  PDV+  + L+   CKA+++ +A++++  M S G  P+  ++ 
Sbjct: 273 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 332

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK    G A Q+  ++ +     + VT+N L+ G C  GN  Q+    + ++ K
Sbjct: 333 SIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 392

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+  T+  L++   K   V AA  +LD +   G  PN+V+YNVL+ GLCK GR EE 
Sbjct: 393 NMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEP 452

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             F  ++ S G  P  ++Y  L+ +LC   R ++A +L++++      P  VTYNIL+  
Sbjct: 453 CEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDG 512

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   GKT+ A+ VL+EMV    +P + ++      L   G +   ++ L  +  +   P+
Sbjct: 513 LWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPD 572

Query: 378 EGTYNGL 384
             T + +
Sbjct: 573 ATTCSSI 579



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 8/301 (2%)

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFR-DLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           ++  YN++L  LC+ G T  A+  FR ++   G  P +V+YN ++  LC         EL
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             E+      P +VTYN LI SL   G  + A ++   M      P+  +Y+ +I  LC 
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163

Query: 356 EGKVDLVVKCLDQMFHRRCK--PNEGTYNG-LAMLCGVGKVQEAFAIIQSL--GNKQNSS 410
            G++D   + + +M  + C   PN  TYN  L  LC      EA  +++SL  G+ + S 
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               +  +I  LC+ G+T +A     +M   G+ P+  TY++L+ GLC    +E A  + 
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M +    PDV  ++ L+   CK+ R D +LE+   M  +G  PN  T+  +++G+   
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341

Query: 531 D 531
           D
Sbjct: 342 D 342



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 8/245 (3%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
           S ++  YNI++ SL   G+T  AL++   EM +    P+  +YN II  LC   ++   +
Sbjct: 42  SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM 101

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           +  +++  R   P+  TYN L   LC  G ++EA  +   + ++        Y  +I  L
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161

Query: 423 CRKGKTYQAFQLLYEMTKYG--FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK- 479
           C+ G+  +A +L+ EMT+      P+  TY+S + GLC + +  EA E+   + +   + 
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 221

Query: 480 -PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PD   F+ L+ GLCK  +TD +      MI  G +PN  TY  LV G+   D++E +  
Sbjct: 222 SPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279

Query: 539 VLKEL 543
           +++ +
Sbjct: 280 MIESM 284



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 74/126 (58%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE MVS G  P+ +   +L+Y LC+A++   A++++  + S G  PD  +Y  LV+ L K
Sbjct: 456 LEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWK 515

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A+ ++E+M   G+  ++ T+ +   GL   GNL  +++ L  ++ KG++P+A T
Sbjct: 516 SGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575

Query: 206 YSFLLE 211
            S +L+
Sbjct: 576 CSSILD 581



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + +DA   + ++ S G  PD V    L+  L K+ K ++AI V+E MV  G  PD+ 
Sbjct: 480 RASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 539

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
           ++      L + GN+   M+L+  +   G   +  T +S++
Sbjct: 540 TFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 243/505 (48%), Gaps = 36/505 (7%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D KL+DA      MV     P +V+   LL  + K NK    I + E M +  I  D  S
Sbjct: 58  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L+NC C++  +  A+ ++ KM   GY  + VT +SL+ G C    +++++  +D++ 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
                PN  T++ L+   +       A+ L+D ++A+G +P+L +Y  ++ GLCK G  +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237

Query: 256 -----------------------------------EAIRFFRDLPSKGFEPNVVSYNILL 280
                                              +A+  F ++ +KG  PNVV+YN L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           R LC  GRW +A+ LL++M     +P +VT++ LI +    GK   A K+ DEM+K    
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
           P   +Y+ +I   C   ++D      + M  + C PN  TYN L    C   +V+E   +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            + +  +        Y  +I  L + G    A ++  +M   G  PD  TYS L+ GLC 
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G +E+AL +F  +++   +PD+  +N ++ G+CK+ + +   ++F  +  KG  PN   
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537

Query: 520 YTILVEGIAHQDELELSAEVLKELQ 544
           YT ++ G   +   E +  + +E++
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMK 562



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 240/492 (48%), Gaps = 1/492 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L  A   L +M+  G++PD+V  ++LL   C   ++ +A+ +++ M      P+  
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ L        A+ L+++M   G   +  TY ++V GLC  G+++ +L  L ++
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +  +  +   Y+ +++A    + V+ A+ L  ++  KG +PN+V+YN L+  LC  GR 
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A R   D+  +   PNVV+++ L+ +   EG+  EA +L  EM      P I TY+ L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     H + D A  + + M+     P+  +YN +I   C   +V+  ++   +M  R  
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N  TYN L   L   G    A  I + + +         Y  ++  LC+ GK  +A  
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   + K    PD YTY+ +I G+C  G +E+  ++F  +     KP+V  +  ++ G C
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +    + +  +F+ M E G +PN  TY  L+       +   SAE++KE++    V +++
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 606

Query: 554 VERLVMQYDFEG 565
              +V+    +G
Sbjct: 607 TISMVINMLHDG 618



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 1/271 (0%)

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L R++ ++ + ++A +L  EM      P+IV +N L+ ++A   K D  + + + M   R
Sbjct: 51  LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
                 SYN +I   C   ++ L +  L +M     +P+  T + L    C   ++ EA 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           A++  +   +       +  +I  L    K  +A  L+  M   G  PD +TY +++ GL
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G I+ AL +   ME+   + DV  +  ++  LC  +  + +L +F  M  KG  PN 
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            TY  L+  + +      ++ +L ++  R++
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 34/232 (14%)

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  EMV+ R  PS   +N +++ +    K DLV+   ++M + R   +  +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L                                  I   CR+ +   A  +L +M K G
Sbjct: 120 IL----------------------------------INCFCRRSQLPLALAVLGKMMKLG 145

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           + PD  T SSL+ G C    I EA+ +   M   +Y+P+   FN L+ GL    +   ++
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +   M+ +G  P+  TY  +V G+  + +++L+  +LK+++  ++ ++  +
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++MVS G  PD++  + LL  LCK  K++KA+ V E +  S + PD  +Y  ++  +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 146 KGNV--GY---------------------------------AMQLVEKMEDYGYPTNTVT 170
            G V  G+                                 A  L  +M++ G   N+ T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           YN+L+R     G+   S + +  +   G V +A T S ++   +  R   + +++L
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628


>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 555

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 233/476 (48%), Gaps = 40/476 (8%)

Query: 69  NNDTRHR---DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
           NN+  H    + KL DA   +E M      P     +NL+  L + +++ KA+ ++ +MV
Sbjct: 103 NNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVILRIMV 162

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
            SG +PD  +Y  ++  LCKKG++  A+ L+E M   G P + +TYN+++R +   GN  
Sbjct: 163 MSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDHGNAE 222

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           Q+++F    ++ G  P   TY+ L+E   +  G   AM +L+D+  +G  P++V+YN L+
Sbjct: 223 QAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTYNSLV 282

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
              C+ G  EE     + + S G E N V+YN LL SLC    W+E  E+L  M      
Sbjct: 283 NYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYC 342

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           PT++TYNILI  L        A+    +M++ +  P   +YN ++  +  EG VD  ++ 
Sbjct: 343 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIEL 402

Query: 366 LDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           L  +    C P   TYN                                   VI  L RK
Sbjct: 403 LGLLKSTSCLPGLITYNS----------------------------------VIDGLARK 428

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A +L + M   G +PD  T  SLI G C   L+EEA ++               +
Sbjct: 429 GLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIRGSTY 488

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
             ++ GLCK R  ++++EV ++M+  G  P+ET YT +V+G+   +E+ + +E ++
Sbjct: 489 RLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAIVKGV---EEMGMGSEAVQ 541



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 202/429 (47%), Gaps = 34/429 (7%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  +   +++ LC  G +  A +LVE M  +    +  + ++LVRGL  +  L++++  L
Sbjct: 99  DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMVIL 158

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++  G VP+  TY+ ++    K+  + +A+ LL+D+   G  P++++YN ++  +   
Sbjct: 159 RIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMFDH 218

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  E+AIRF++D    G  P +++Y +L+  +C       A ++L +M      P IVTY
Sbjct: 219 GNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIVTY 278

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N L+      G  +    V+  ++      +  +YN ++  LCS    D V + L+ M+ 
Sbjct: 279 NSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQ 338

Query: 372 RRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
               P   TYN L                                  I  LC+     +A
Sbjct: 339 TSYCPTVITYNIL----------------------------------INGLCKARLLSRA 364

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
               Y+M +    PD  TY++L+  +  EG++++A+E+  +++     P +  +N+++ G
Sbjct: 365 IDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDG 424

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           L +      +LE++  M++ G  P++ T   L+ G    + +E +++VLKE   R     
Sbjct: 425 LARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSNRGNGIR 484

Query: 552 SAVERLVMQ 560
            +  RLV+Q
Sbjct: 485 GSTYRLVIQ 493



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 122/265 (46%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   L +  L ++ ++S G + + V    LL+ LC      +  +++ +M  +   P   
Sbjct: 287 RRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVI 346

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK   +  A+    +M +     + VTYN+L+  +   G ++ +++ L  L
Sbjct: 347 TYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLL 406

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +P   TY+ +++   ++  +  A++L   ++  G  P+ ++   L+ G C+    
Sbjct: 407 KSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLV 466

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA +  ++  ++G      +Y ++++ LC +   E A E++  M      P    Y  +
Sbjct: 467 EEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAI 526

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRF 339
           +  +   G    A+++  ++ + + 
Sbjct: 527 VKGVEEMGMGSEAVQLQKKLTQWKL 551


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 236/469 (50%), Gaps = 5/469 (1%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV---SSGIIP 131
           D + +DA  + L RM   G  PDV    NLL  LC  N+ ++A++++ MM      G  P
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  SY  ++N   K+G+   A     +M D G   + VTY+S++  LC    ++++++ L
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVL 259

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           + +++ G++P+  TY+ +L           A+  L  + + G +PN+V+Y+ L+  LCK 
Sbjct: 260 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR+ EA + F  +  +G EP++ +Y  LL+    +G   E + LL  M      P    +
Sbjct: 320 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI + A   K D A+ V  +M +    P+   Y  +I  LC  G VD  +   +QM  
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
               PN   Y  L   LC   K  +A  +I  + ++       F+  +I S C++G+  +
Sbjct: 440 EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           + +L   M + G  PD  TY++LI G C+ G ++EA ++   M     KPD+  +  L+ 
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           G C+  R D +L +F+ M+  G  PN  TY I+++G+ H      + E+
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 231/492 (46%), Gaps = 38/492 (7%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + A+     M+ +G  PDVV  ++++  LCKA  M KA++V+  MV +G++PD  +Y  +
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  C  G    A+  ++KM   G   N VTY+SL+  LC  G   ++ +  D + ++GL
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------------------------- 234
            P+  TY  LL+  Y  +G    M  L D++ + G                         
Sbjct: 338 EPDIATYRTLLQ-GYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396

Query: 235 -----------KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                       PN+V Y  ++  LCK G  ++A+ +F  +  +G  PN++ Y  L+  L
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C   +W++A EL+ EM         + +N +I S    G+   + K+ D MV+   +P  
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 516

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
            +YN +I   C  GK+D   K L  M     KP+  TY  L    C V ++ +A A+ + 
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + +   S     Y  ++  L    +T  A +L   +TK G   +  TY+ ++ GLC   L
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            +EAL +F  +   D + +   FN ++  L K  R D + ++F      G +P+  TY++
Sbjct: 637 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696

Query: 523 LVEGIAHQDELE 534
           + E +  Q  LE
Sbjct: 697 MAENLIEQGSLE 708



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/475 (23%), Positives = 212/475 (44%), Gaps = 42/475 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG---IIPDASSYT 137
           DA    + ++ +G    +      L D+ + +    A+     M  +G   + P   +Y 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-LDRLIQ 196
            L+ C C+ G +      +  +   G+  + +T+  L++GLC     + ++   L R+ +
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLD---DIIAKGGKPNLVSYNVLLTGLCKEGR 253
            G +P+ F+Y+ LL+    E     A++LL    D    G  P++VSYN +L G  KEG 
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           +++A   + ++  +G  P+VV+Y+ ++ +LC     ++A E+L  M      P  +TYN 
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           ++      G+   A+  L +M      P+  +Y+ ++  LC  G+     K  D M  R 
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            +P+  T                                  Y+ ++     KG   +   
Sbjct: 337 LEPDIAT----------------------------------YRTLLQGYATKGALVEMHA 362

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M + G  PD + ++ LI     +  +++A+ +F  M ++   P+V  +  ++  LC
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           KS   D ++  F+ MI++G  PN   YT L+ G+   D+ + + E++ E+  R +
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 185/381 (48%), Gaps = 1/381 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A L   +M   G  P+VV    ++  LCK+  +  A+   E M+  G+ P+  
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++ LC       A +L+ +M D G   NT+ +NS++   C  G + +S +  D +
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ P+  TY+ L++       +  A KLL  +++ G KP++V+Y  L+ G C+  R 
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F+++ S G  PN+++YNI+L+ L    R   A EL   +        + TYNI+
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  +  TD AL++   +     +    ++N +I  L   G++D              
Sbjct: 628 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 687

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY+ +A  L   G ++E   +  S+     S+       ++  L ++G   +A  
Sbjct: 688 VPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGT 747

Query: 434 LLYEMTKYGFTPDSYTYSSLI 454
            L+ + +  F+ ++ T S L+
Sbjct: 748 YLFMIDEKHFSLEASTASFLL 768



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 151/300 (50%), Gaps = 4/300 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   ++DA L  E+M+ +G  P+++  T+L++ LC  +K  KA +++  M+  GI 
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +   +  +++  CK+G V  + +L + M   G   + +TYN+L+ G C+ G ++++ + 
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++  G+ P+  TY  L+    +   +  A+ L  ++++ G  PN+++YN++L GL  
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             RT  A   +  +   G +  + +YNI+L  LC     +EA  +   +   D      T
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 658

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +NI+IG+L   G+ D A  +          P   +Y+ +   L  +G ++     LD +F
Sbjct: 659 FNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE----LDDLF 714



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 13/316 (4%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL-----LAEMDGGDRSPTIV 309
           E+A   F +L  +G   ++   N   R+L    R   A  +     +A    G  +PT+ 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLN---RALADVARHSPAAAVSRYNRMARAGAGKVTPTVH 93

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQ 368
           TY ILIG     G+ D     L  +VK  FR  A ++ P++  LC++ +  D +   L +
Sbjct: 94  TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN-KQNSSPQEFYKY--VITSLCR 424
           M    C P+  +YN L   LC   + QEA  ++  + + +   SP +   Y  V+    +
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +G + +A+   +EM   G  PD  TYSS+I  LC    +++A+E+   M +    PD   
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N++L G C S +   ++   + M   G  PN  TY+ L+  +        + ++   + 
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 545 LRQVVSESAVERLVMQ 560
            R +  + A  R ++Q
Sbjct: 334 KRGLEPDIATYRTLLQ 349


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 251/520 (48%), Gaps = 41/520 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M  +G  P       +L   C+    + A++V+E + + G   D  +  
Sbjct: 137 RIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCN 196

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C +G+V  A+ L+  +  +G   + V+YN++++GLCM        + ++ +++ 
Sbjct: 197 LVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  T++ L+    +        ++L  +   G  P++  Y  ++ G+CKEG  + A
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVA 316

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +PS G +PNVV YN LL+ LC   RWEE  ELLAEM   D     VT+NIL+  
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D  +++L++M+     P   +Y  +I   C EG +D  V  L  M    CKPN
Sbjct: 377 FCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 378 EGTYN----GLA--------------------------------MLCGVGKVQEAFAIIQ 401
             +Y     GL                                  LC  G V++A  +++
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +     S     Y  VI  L + GKT +A +LL  M   G +P++  YSS+   L  EG
Sbjct: 497 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I + +++F  +++   + D   +NA++  LCK   T+ ++E    M+  G +PNE+TYT
Sbjct: 557 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           IL+ G+A +  ++ + E+L EL      S+ A+ + +M++
Sbjct: 617 ILIRGLASEGFVKEAQEMLTEL-----CSKGALRKHLMKH 651



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 212/409 (51%), Gaps = 4/409 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +V   C+ G +  A +L   +     P N  TY  +VR LC  G +  +L  LD + 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++G  P    Y  +LEAA +  G  +A+++L+D+ A+G   ++ + N++L  +C +G  +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+   RDLPS G EP+VVSYN +L+ LCM  RW    EL+ EM      P IVT+N LI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L  +G  +   +VL +M +    P    Y  II  +C EG + +  + L++M     K
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN   YN L   LC   + +E   ++  + +K        +  ++   C+ G   +  +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L +M  +G  PD  TY+++I G C EGLI+EA+ +   M     KP+  ++  +L GLC 
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + R   + ++   MI++G   N  T+  L+  +  +  +E + E+LK++
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 152/341 (44%), Gaps = 42/341 (12%)

Query: 239 VSYNVLLTGLCKEGRT--------------------------------EEAIRFFRDLPS 266
           V  + L+  LC  GRT                                E A R    +P 
Sbjct: 59  VRLSSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRLAAAVP- 117

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               PN  +Y  ++R+LC  GR  +A  +L EM     +P    Y++++ +    G    
Sbjct: 118 --VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 175

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN---- 382
           A++VL+++          + N ++  +C +G VD  +  L  +    C+P+  +YN    
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLK 235

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           GL M    G VQE    +  +    N      +  +I+ LCR G   +  ++L +M ++G
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIV---TFNTLISYLCRNGLFERVHEVLAQMAEHG 292

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            TPD   Y+++I G+C EG ++ A EI   M  Y  KP+V  +N LL GLC + R + + 
Sbjct: 293 CTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETE 352

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           E+   M +K    ++ T+ ILV+       ++   E+L+++
Sbjct: 353 ELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 393



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 47/89 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++N      + +     + D V    ++  LCK  + ++AI+ +  MVSSG +P+ S
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +YT L+  L  +G V  A +++ ++   G
Sbjct: 614 TYTILIRGLASEGFVKEAQEMLTELCSKG 642


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 256/503 (50%), Gaps = 39/503 (7%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G +P VV  T LL  +CK++   +A+ V++ M + G  P+  +Y  ++N +C++G 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC----------------------------M 180
           V  A +++ ++  YG+  + V+Y ++++GLC                            M
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 181 L-------GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L       G + +++Q L ++ Q G  PN    + ++ A  K+  V  A   L+++   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             P+ +SY  +L GLC+ GR E A     ++  K   PN V++N  +  LC +G  E+A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +L+  M     S  IVTYN L+      G+ D AL++ + +      P+  +Y  ++  L
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGL 474

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C   ++D   + L +M  + C  N  T+N L +  C  G V+EA  ++  +     +   
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             +  ++  + +   + +A +LL+ +   G + D+ TYSS++  L  E   EEA+++   
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 594

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           +++   +P V  +N +L  LCK   TD +++ F  M+  G MPNE+TY IL+EG+AH+  
Sbjct: 595 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL 654

Query: 533 LELSAEVLKELQLRQVVSESAVE 555
           L+ +  VL EL  + V+S+S +E
Sbjct: 655 LKEARYVLSELYAKGVLSKSLLE 677



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 79/155 (50%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + +A   + +M+  G  P+++    LL  + K    ++A++++  +VS G+  D  +Y+ 
Sbjct: 515 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS 574

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V+ L ++     A+Q++  ++D G       YN ++  LC     +Q++ F   ++  G
Sbjct: 575 VVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG 634

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
            +PN  TY  L+E    E  +  A  +L ++ AKG
Sbjct: 635 CMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 669



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ +  +A   L  +   G +P V     +L+ LCK  +  +AI     MVS+G +
Sbjct: 577 DVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCM 636

Query: 131 PDASSYTYLVNCLCKKG 147
           P+ S+Y  L+  L  +G
Sbjct: 637 PNESTYIILIEGLAHEG 653


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 233/459 (50%), Gaps = 5/459 (1%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS---GIIP 131
           D + +DA  + L RM   G  PDV    NLL  LC  N+ ++A++++ MM      G  P
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  SY  ++N   K+G+   A     +M D G   + VTY+S++  LC    ++++++ L
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVL 259

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           + +++ G++P+  TY+ +L           A+  L  + + G +PN+V+Y+ L+  LCK 
Sbjct: 260 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR+ EA + F  +  +G EP++ +Y  LL+    +G   E + LL  M      P    +
Sbjct: 320 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI + A   K D A+ V  +M +    P+   Y  +I  LC  G VD  +   +QM  
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
               PN   Y  L   LC   K  +A  +I  + ++       F+  +I S C++G+  +
Sbjct: 440 EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           + +L   M + G  PD  TY++LI G C+ G ++EA ++   M     KPD+  +  L+ 
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           G C+  R D +L +F+ M+  G  PN  TY I+++G+ H
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 231/492 (46%), Gaps = 38/492 (7%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + A+     M+ +G  PDVV  ++++  LCKA  M KA++V+  MV +G++PD  +Y  +
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  C  G    A+  ++KM   G   N VTY+SL+  LC  G   ++ +  D + ++GL
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------------------------- 234
            P+  TY  LL+  Y  +G    M  L D++ + G                         
Sbjct: 338 EPDIATYRTLLQ-GYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396

Query: 235 -----------KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                       PN+V Y  ++  LCK G  ++A+ +F  +  +G  PN++ Y  L+  L
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C   +W++A EL+ EM         + +N +I S    G+   + K+ D MV+   +P  
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 516

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
            +YN +I   C  GK+D   K L  M     KP+  TY  L    C V ++ +A A+ + 
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + +   S     Y  ++  L    +T  A +L   +TK G   +  TY+ ++ GLC   L
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            +EAL +F  +   D + +   FN ++  L K  R D + ++F      G +P+  TY++
Sbjct: 637 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696

Query: 523 LVEGIAHQDELE 534
           + E +  Q  LE
Sbjct: 697 MAENLIEQGSLE 708



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 211/475 (44%), Gaps = 42/475 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG---IIPDASSYT 137
           DA    + ++ +G    +      L D+ + +    A+     M  +G   + P   +Y 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-LDRLIQ 196
            L+ C C+ G +      +  +   G+  + +T+  L++GLC     + ++   L R+ +
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLD---DIIAKGGKPNLVSYNVLLTGLCKEGR 253
            G +P+ F+Y+ LL+    E     A++LL    D    G  P++VSYN +L G  KEG 
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           +++A   + ++  +G  P+VV+Y+ ++ +LC     ++A E+L  M      P  +TYN 
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           ++      G+   A+  L +M      P+  +Y+ ++  LC  G+     K  D M  R 
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            +P+  TY  L                                  +     KG   +   
Sbjct: 337 LEPDIATYRTL----------------------------------LQGYATKGALVEMHA 362

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M + G  PD + ++ LI     +  +++A+ +F  M ++   P+V  +  ++  LC
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           KS   D ++  F+ MI++G  PN   YT L+ G+   D+ + + E++ E+  R +
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 185/381 (48%), Gaps = 1/381 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A L   +M   G  P+VV    ++  LCK+  +  A+   E M+  G+ P+  
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++ LC       A +L+ +M D G   NT+ +NS++   C  G + +S +  D +
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ P+  TY+ L++       +  A KLL  +++ G KP++V+Y  L+ G C+  R 
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F+++ S G  PN+++YNI+L+ L    R   A EL   +        + TYNI+
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  +  TD AL++   +     +    ++N +I  L   G++D              
Sbjct: 628 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 687

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY+ +A  L   G ++E   +  S+     S+       ++  L ++G   +A  
Sbjct: 688 VPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGT 747

Query: 434 LLYEMTKYGFTPDSYTYSSLI 454
            L+ + +  F+ ++ T S L+
Sbjct: 748 YLFMIDEKHFSLEASTASFLL 768



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 151/300 (50%), Gaps = 4/300 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   ++DA L  E+M+ +G  P+++  T+L++ LC  +K  KA +++  M+  GI 
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +   +  +++  CK+G V  + +L + M   G   + +TYN+L+ G C+ G ++++ + 
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++  G+ P+  TY  L+    +   +  A+ L  ++++ G  PN+++YN++L GL  
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             RT  A   +  +   G +  + +YNI+L  LC     +EA  +   +   D      T
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 658

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +NI+IG+L   G+ D A  +          P   +Y+ +   L  +G ++     LD +F
Sbjct: 659 FNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE----LDDLF 714



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 13/316 (4%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL-----LAEMDGGDRSPTIV 309
           E+A   F +L  +G   ++   N   R+L    R   A  +     +A    G  +PT+ 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLN---RALADVARHSPAAAVSRYNRMARAGAGKVTPTVH 93

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQ 368
           TY ILIG     G+ D     L  +VK  FR  A ++ P++  LC++ +  D +   L +
Sbjct: 94  TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN-KQNSSPQEFYKY--VITSLCR 424
           M    C P+  +YN L   LC   + QEA  ++  + + +   SP +   Y  V+    +
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +G + +A+   +EM   G  PD  TYSS+I  LC    +++A+E+   M +    PD   
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N++L G C S +   ++   + M   G  PN  TY+ L+  +        + ++   + 
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 545 LRQVVSESAVERLVMQ 560
            R +  + A  R ++Q
Sbjct: 334 KRGLEPDIATYRTLLQ 349


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 245/473 (51%), Gaps = 3/473 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV--MEMMVSSGIIPD 132
           +D KL+DA      MV     P + +   LL  + K  K    I +  +  M+  G  P 
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             + + L+N  C    +  A+ LV++M + GY  +T+T+ +L+ GL +    ++++  +D
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R++Q+G  PN  TY  ++    K   +  A  LL+ + A   + ++V +N ++  LCK  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             ++A+  F+++ +KG  PNVV+Y+ L+  LC  GRW +A++LL++M     +P +VT+N
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI +    GK   A K+ D+M+K    P   +YN +I   C   ++D   +  + M  +
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C P+  TYN L    C   +V++   + + + ++        Y  +I  L   G    A
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 378

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++  +M   G  PD  TYS L+ GLC  G +E+ALE+F  M++ + K D+  +  ++ G
Sbjct: 379 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 438

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +CK+ + D   ++F  +  KG  PN  TY  ++ G+  +  L+ +  +LK+++
Sbjct: 439 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 204/420 (48%), Gaps = 36/420 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA   +++MV  G++PD +  T L++ L   NK  +A+ +++ MV  G  P+  +Y 
Sbjct: 94  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 153

Query: 138 YLVNCLCKKGNVGYAMQLVEKME-----------------------------------DY 162
            +VN LCK+G++  A  L+ KME                                     
Sbjct: 154 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 213

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   N VTY+SL+  LC  G  + + Q L  +I+K + PN  T++ L++A  KE     A
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            KL DD+I +   P++ +YN L+ G C   R ++A + F  + SK   P++ +YN L++ 
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C   R E+  EL  EM         VTY  LI  L + G  D+A KV  +MV     P 
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             +Y+ ++  LC+ GK++  ++  D M     K +   Y  +   +C  GKV + + +  
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           SL  K        Y  +I+ LC K    +A+ LL +M + G  PDS TY++LIR    +G
Sbjct: 454 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 167/379 (44%), Gaps = 36/379 (9%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH--AAMKLLDDIIAKGGKPNLVSY 241
           L+ ++     +++   +P+ F ++ LL A  K +      ++ LL  ++  G +P++V+ 
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + LL G C   R  +A+     +   G+ P+ +++  L+  L +  +  EA  L+  M  
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P +VTY +++  L   G  D A  +L++M   +       +N II  LC    VD 
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            +    +M  +  +PN  TY+ L                                  I+ 
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSL----------------------------------ISC 228

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC  G+   A QLL +M +    P+  T+++LI     EG   EA ++   M +    PD
Sbjct: 229 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 288

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           +  +N+L+ G C   R D + ++F+ M+ K   P+  TY  L++G      +E   E+ +
Sbjct: 289 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 348

Query: 542 ELQLRQVVSESAVERLVMQ 560
           E+  R +V ++     ++Q
Sbjct: 349 EMSHRGLVGDTVTYTTLIQ 367



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 147/320 (45%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   L  M+ K   P++V    L+    K  K  +A K+ + M+   I PD  +Y 
Sbjct: 234 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 293

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  C    +  A Q+ E M       +  TYN+L++G C    +    +    +  +
Sbjct: 294 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 353

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLV +  TY+ L++  + +     A K+   +++ G  P++++Y++LL GLC  G+ E+A
Sbjct: 354 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 413

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +     + ++  Y  ++  +C  G+ ++  +L   +      P +VTYN +I  
Sbjct: 414 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 473

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L        A  +L +M +    P + +YN +I     +G      + + +M   R   +
Sbjct: 474 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 533

Query: 378 EGTYNGLAMLCGVGKVQEAF 397
             T   +A +   G++ ++F
Sbjct: 534 ASTIGLVANMLHDGRLDKSF 553



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 1/218 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ D       M  +G   D V  T L+  L        A KV + MVS G+ PD  
Sbjct: 336 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++ LC  G +  A+++ + M+      +   Y +++ G+C  G ++        L
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 455

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG+ PN  TY+ ++     +R +  A  LL  +   G  P+  +YN L+    ++G  
Sbjct: 456 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 515

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
             +    R++ S  F  +  +   L+ ++  +GR +++
Sbjct: 516 AASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS 552


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 248/483 (51%), Gaps = 5/483 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   + +AF   E MV  G  PD      L+  LCK +++K+A  +++ M  SG+ P+  
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  LV+   K+G    A  ++++M   G   N + Y++L+RGLC +G L ++ + L  +
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ GL P+ FTY+ L++  +++     A +LL+++   G  PN+ SY +++ GLC+ G +
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA     ++ S+G +PN   Y  L+     EG    A E L +M   +  P +  YN L
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L+  G+ + A +   ++ K    P   +Y+ +I   C  G ++   + L QM +   
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589

Query: 375 KPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           KPN  TY  L  L G  K    ++  +I+QS+    +      Y  VI +L R      A
Sbjct: 590 KPNADTYTDL--LEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 647

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F +L E+ K G  PD + YSSLI GLC    +E+A+ +   M +   +P +  +NAL+ G
Sbjct: 648 FMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 707

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            C+S     +  VF  ++ KG +PN  TYT L++G     ++  + ++ KE+  R +  +
Sbjct: 708 FCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPD 767

Query: 552 SAV 554
           + V
Sbjct: 768 AFV 770



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 244/514 (47%), Gaps = 8/514 (1%)

Query: 44  VLASTQVTISPKDSVYTKPNRKPGNNN---DTRHRDHKLNDAFLQLERMVSKGHKPDVVQ 100
           VLAS Q  I   D     P+      +   DT  +   + +A   +  M   G  P    
Sbjct: 151 VLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRC 210

Query: 101 ATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
              LL DL +A+ M+   K+   M  +GI+PD  +Y+  +   CK  +   A ++ E+M 
Sbjct: 211 CNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMR 270

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
                 N VTYN ++ GLC  G + ++  F + ++  GL P+AFTY  L+    K   + 
Sbjct: 271 RRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLK 330

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A  LLD++   G KPN+V Y  L+ G  KEG+T EA    +++ S G +PN + Y+ L+
Sbjct: 331 EAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLI 390

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI-GSLAYHGKTDHALKVLDEMVKGRF 339
           R LC  G+   A++LL EM      P   TYN L+ G    H K D A ++L+EM     
Sbjct: 391 RGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDK-DGAFELLNEMRNSGI 449

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
            P+  SY  +I  LC  G+       L++M     KPN   Y  L +     G +  A  
Sbjct: 450 LPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACE 509

Query: 399 IIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            ++ +  K N  P  F Y  +I  L   G+  +A +   ++ K G  PD +TYS LI G 
Sbjct: 510 ALEKM-TKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 568

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G +E+A ++   M     KP+ D +  LL G  KS   +    + Q M+  G  P+ 
Sbjct: 569 CKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDN 628

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             Y I++  ++  + +E++  VL E++   +V +
Sbjct: 629 HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPD 662



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 238/528 (45%), Gaps = 40/528 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K  +AF  L+ M+S G +P+ +   NL+  LCK  ++ +A K+++ M+  G+ 
Sbjct: 356 DGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLR 415

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+    ++ +   A +L+ +M + G   N  +Y  ++ GLC  G   ++   
Sbjct: 416 PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNL 475

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ +I +GL PNAF Y+ L+    KE  +  A + L+ +      P+L  YN L+ GL  
Sbjct: 476 LEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLST 535

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----------- 299
            GR EEA  ++  +  +G  P+  +Y+ L+   C  G  E+A++LL +M           
Sbjct: 536 VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT 595

Query: 300 -------------------------DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
                                      GD+ P    Y I+I +L+     + A  VL E+
Sbjct: 596 YTDLLEGYFKSNDYEKVSSILQSMLGSGDK-PDNHIYGIVIRNLSRSENMEVAFMVLTEV 654

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKV 393
            K    P    Y+ +I+ LC    ++  V  LD+M     +P    YN L    C  G +
Sbjct: 655 EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 714

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
             A  +  S+  K        Y  +I   C+ G    AF L  EM   G  PD++ Y+ L
Sbjct: 715 SRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVL 774

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
             G      +E+AL +   M    Y  +V  FN L+ G CK  +   + ++  +M+++  
Sbjct: 775 ATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREI 833

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +PN  T   +V       +L  +  V  ELQ ++  S+SA +R  + +
Sbjct: 834 VPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKK-ASQSATDRFSLLF 880



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 3/337 (0%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           +G  PD    + L++  CK   ++KA +++  M++SG+ P+A +YT L+    K  +   
Sbjct: 552 RGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEK 611

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
              +++ M   G   +   Y  ++R L    N+  +   L  + + GLVP+   YS L+ 
Sbjct: 612 VSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 671

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K   +  A+ LLD++  +G +P +V YN L+ G C+ G    A   F  + +KG  P
Sbjct: 672 GLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVP 731

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N V+Y  L+   C  G   +A +L  EM     +P    YN+L    +     + AL + 
Sbjct: 732 NCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 791

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-V 390
           +EM   R   + + +N ++   C  GK+    K L  M  R   PN  T   +    G  
Sbjct: 792 EEMFN-RGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKA 850

Query: 391 GKVQEAFAIIQSLGNKQNS-SPQEFYKYVITSLCRKG 426
           GK+ EA  +   L  K+ S S  + +  + T +  KG
Sbjct: 851 GKLGEAHRVFAELQQKKASQSATDRFSLLFTDMINKG 887



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 24/297 (8%)

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEM---------------------DGGDRSPTIV 309
           P+  ++  L  SLC    + +AN LL +M                     D   RSP+  
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPS 172

Query: 310 T--YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           T   ++L+ +    G   +A +V+  M      P+    N ++  L     ++L+ K   
Sbjct: 173 TAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKG 232

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            M      P+  TY+  +   C       A  + + +  +  +  +  Y  +I+ LCR G
Sbjct: 233 FMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              +AF    EM  YG +PD++TY +L+ GLC    ++EA  +   M     KP++  + 
Sbjct: 293 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYG 352

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            L+ G  K  +T  + ++ + MI  G  PN+  Y  L+ G+    +L  ++++LKE+
Sbjct: 353 TLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 235/480 (48%), Gaps = 1/480 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++DA     RMV     P       LL  + +      AI +   + S GI P  +
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L+NC   + +  +A  L+  +   GY  N VT+N+++ G C+ G + ++L F   L
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G + + FTY  L+    K   + AA+ LL ++     +PNLV Y+ L+ GLCK+G  
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+     +  +G   + V+YN L+   C  GRW+E  +LL +M   +  P   T+NIL
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   G+   A  VL  M K   +P   +YN ++   CS   V    +  ++M  R  
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+   YN L    C    V EA  + + L NK        Y  +I  LC  G+     +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM      PD  TY+ LI  LC EG I EAL + V+M +   KP++  +NA++ G C
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
                +++ ++F  M++ G  P+   Y +L+ G    + ++ +  + KE++ + ++ + A
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 237/461 (51%), Gaps = 8/461 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + ++++G+  D      L+  L K  ++K A+ +++ M  S + P+   Y+ L++ LCK 
Sbjct: 149 QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKD 208

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V  A+ L  ++ + G   + VTYNSL+ G C +G   +  Q L +++++ + P+ +T+
Sbjct: 209 GFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L++A  KE  +  A  +L  +  +G KP++V+YN L+ G C      EA   F  +  
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G EP+V++YN+L+   C     +EA  L  E+   +  PTI +YN LI  L   G+  H
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
             K+LDEM      P   +YN +I  LC EG++   +  L  M  +  KPN  TYN  AM
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN--AM 446

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQE----FYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           + G   ++    + + + N+   S  E     Y  +I   C+     +A  L  EM    
Sbjct: 447 MDGYC-LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD  +Y+SLI GLC  G I    E+   M +    PDV  +N LL   CK++  D ++
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +F+ ++E G  P+  T   +V+ +   ++L+++ + LK L
Sbjct: 566 SLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHL 605



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 230/477 (48%), Gaps = 2/477 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  ++DA     ++  +G   D V   +L+   C   + ++  +++  MV   + PD  
Sbjct: 207 KDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ LCK+G +  A  ++  M   G   + VTYN+L+ G C   N++++ +  +R+
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++GL P+   Y+ L++   K + V  AM L  ++  K   P + SYN L+ GLC  GR 
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
               +   ++      P+VV+YNIL+ +LC EGR  EA  +L  M      P IVTYN +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +         + A  + + MVK    P   +YN +I   C    VD  +    +M H+  
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  +YN L   LC +G++     ++  + +   S     Y  ++ + C+     +A  
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  ++ + G  PD YT  +++  LC    ++ A +    +  +   P+V  +  L+  LC
Sbjct: 567 LFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           K      ++ +   M +  + P+  T+ I++  +  ++E + + ++ +E+  R +V+
Sbjct: 626 KDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVN 682


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 246/494 (49%), Gaps = 36/494 (7%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M SKG    +   + ++   C+  K+  A   M  ++  G  PD   +  L+N LC +
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A++LV++M + G+    +T N+LV GLC+ G ++ ++  +DR+++ G  PN  TY
Sbjct: 172 CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             +L    K      AM+LL  +  +  K + V Y++++ GLCK+G  + A   F ++  
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KGF+ ++++YN L+   C  GRW++  +LL +M     SP +VT+++LI S    GK   
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A ++L EM++    P+  +YN +I   C E +++  ++ +D M  + C P+  T+N L  
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C   ++ +   + + +  +   +    Y  ++   C+ GK   A +L  EM      P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE-- 503
           D  +Y  L+ GLC  G +E+ALEIF  +E+   + D+  +  ++ G+C + + D + +  
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531

Query: 504 ---------------------------------VFQMMIEKGQMPNETTYTILVEGIAHQ 530
                                            +F+ M E+G  P+E TY IL+      
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591

Query: 531 DELELSAEVLKELQ 544
           D+   +AE+++E++
Sbjct: 592 DDATTAAELIEEMK 605



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 213/406 (52%), Gaps = 1/406 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++DA + ++RMV  G +P+ V    +L  +CK+ +   A++++  M    I  DA  Y+
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK G++  A  L  +ME  G+  + +TYN+L+ G C  G  +   + L  +I++
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + PN  T+S L+++  KE  +  A +LL +++ +G  PN ++YN L+ G CKE R EEA
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I+    + SKG +P+++++NIL+   C   R ++  EL  EM         VTYN L+  
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK + A K+  EMV  R RP   SY  ++  LC  G+++  ++   ++   + + +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            G Y  +   +C   KV +A+ +  SL  K        Y  +I+ LCRK    +A  L  
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           +MT+ G  PD  TY+ LIR    +     A E+   M+   +  DV
Sbjct: 568 KMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADV 613



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 237/473 (50%), Gaps = 3/473 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K +DA      M+     P V+    L   + K  + +  + + + M S GI     + +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++NC C+   + YA   + K+   GY  +TV +N+L+ GLC+   ++++L+ +DR+++ 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   T + L+        V  A+ L+D ++  G +PN V+Y  +L  +CK G+T  A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   R +  +  + + V Y+I++  LC +G  + A  L  EM+       I+TYN LIG 
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D   K+L +M+K +  P+  +++ +I     EGK+    + L +M  R   PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L    C   +++EA  ++  + +K        +  +I   C+  +     +L  
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM+  G   ++ TY++L++G C  G +E A ++F  M     +PD+ ++  LL GLC + 
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487

Query: 497 RTDLSLEVFQMMIEKGQMPNET-TYTILVEGIAHQDELELSAEVLKELQLRQV 548
             + +LE+F   IEK +M  +   Y I++ G+ +  +++ + ++   L L+ V
Sbjct: 488 ELEKALEIFG-KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 183/377 (48%), Gaps = 1/377 (0%)

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           + ++     +IQ   +P    ++ L  A  K +     + L   + +KG   ++ + +++
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           +   C+  +   A      +   G+EP+ V +N LL  LC+E R  EA EL+  M     
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            PT++T N L+  L  +GK   A+ ++D MV+  F+P+  +Y P++  +C  G+  L ++
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            L +M  R  K +   Y+ +   LC  G +  AF +   +  K   +    Y  +I   C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
             G+     +LL +M K   +P+  T+S LI     EG + EA ++   M +    P+  
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +N+L+ G CK  R + ++++  +MI KG  P+  T+ IL+ G    + ++   E+ +E+
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429

Query: 544 QLRQVVSESAVERLVMQ 560
            LR V++ +     ++Q
Sbjct: 430 SLRGVIANTVTYNTLVQ 446



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 152/290 (52%), Gaps = 1/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++ KL +A   L+ M+ +G  P+ +   +L+   CK N++++AI+++++M+S G  
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  L+N  CK   +   ++L  +M   G   NTVTYN+LV+G C  G L  + + 
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ + + P+  +Y  LL+       +  A+++   I     + ++  Y +++ G+C 
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + ++A   F  LP KG + +  +YNI++  LC +    +A+ L  +M     +P  +T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YNILI +         A ++++EM    F P+  S   ++  + S G++D
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVINMLSSGELD 629



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 146/315 (46%), Gaps = 35/315 (11%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  L++AF     M  KG K D++    L+   C A +     K++  M+   I 
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +++ L++   K+G +  A QL+++M   G   NT+TYNSL+ G C    L +++Q 
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +I KG  P+  T++ L+    K   +   ++L  ++  +G   N V+YN L+ G C+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA-------EMDGG- 302
            G+ E A + F+++ S+   P++VSY ILL  LC  G  E+A E+         E+D G 
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510

Query: 303 --------------DRSPTIV-------------TYNILIGSLAYHGKTDHALKVLDEMV 335
                         D +  +               YNI+I  L        A  +  +M 
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570

Query: 336 KGRFRPSAASYNPII 350
           +    P   +YN +I
Sbjct: 571 EEGHAPDELTYNILI 585



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 36/316 (11%)

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN---------------- 312
           F    +SY   L S  +  + ++A +L  +M      PT++ +N                
Sbjct: 49  FSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVL 108

Query: 313 -------------------ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
                              I+I       K  +A   + +++K  + P    +N ++  L
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C E +V   ++ +D+M     KP   T N L   LC  GKV +A  +I  +        +
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  V+  +C+ G+T  A +LL +M +     D+  YS +I GLC +G ++ A  +F  
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           ME   +K D+  +N L+ G C + R D   ++ + MI++   PN  T+++L++    + +
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348

Query: 533 LELSAEVLKELQLRQV 548
           L  + ++LKE+  R +
Sbjct: 349 LREADQLLKEMMQRGI 364


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 252/498 (50%), Gaps = 13/498 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + +A   +  M  K   PD+V    L+  LCKA K+K+A+ ++  M ++G  P++ 
Sbjct: 156 RNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 215

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + T L++ LCK G +  AM+L+E M+  G+  + V Y +L+ G C  GNL++  +  D +
Sbjct: 216 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG+  N  TYS L+    +      A  +L+ +   G  P++V+Y  L+ GLCK+GR 
Sbjct: 276 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 335

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+     +  KG EP+ V+YN+LL  LC EG   +A ++L  M    +   +VTYN L
Sbjct: 336 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 395

Query: 315 IGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +  L   GK D ALK+ + M        P+  ++N +I  LC EG++   VK   +M  +
Sbjct: 396 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455

Query: 373 RCKPNEGTYNGLAMLC-GVGKVQEAFAI---IQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
               N  TYN L   C   GK++EA  +   +  LG   NS     Y  +I   C+    
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT---YSILIDGFCKMRML 512

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A  L  EM  +G  P  + Y++L+  LC EG +E+A  +F  M   + +PD+ +FN +
Sbjct: 513 NIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTM 572

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + G  K+       E+   M+E G  P+  T++ L+  ++   EL+ +   L+    R V
Sbjct: 573 IDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE----RMV 628

Query: 549 VSESAVERLVMQYDFEGI 566
            S    + LV     +G+
Sbjct: 629 ASGFTPDALVYDSLLKGL 646



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 233/475 (49%), Gaps = 5/475 (1%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
            R R++ L  AF    RM      P     + L+     A K +    V+ +++  G   
Sbjct: 85  ARSRNYGL--AFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTV 142

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +      ++  LC+ G V  AM L+ +M       + V+YN+L+ GLC    L +++  L
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +   G  PN+ T + L++   K+  +  AM+LL+ +  KG   ++V Y  L++G C  
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  +     F ++  KG   NVV+Y+ L+  LC  G+W+EAN +L  M      P +VTY
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             LI  L   G+  HA+ +L+ MV+    PS  +YN +++ LC EG V    K L  M  
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 382

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS-SPQEF-YKYVITSLCRKGKT 428
           +  K +  TYN L   LC  GKV EA  +  S+ + +N   P  F +  +I  LC++G+ 
Sbjct: 383 KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 442

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A ++  +M K G   +  TY+ L+ G    G I+EA+E++  + +  + P+   ++ L
Sbjct: 443 TKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 502

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + G CK R  +++  +F  M   G  P    Y  L+  +  +  LE +  + +E+
Sbjct: 503 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 220/446 (49%), Gaps = 9/446 (2%)

Query: 105 LYDLCKA--NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           L  LC+   ++  +A+ +    +   ++P  ++  +LV+ L +  N G A  +  +M   
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQF--LDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
               +  + ++L+   C        L F  +  ++++G   N F  + +L+   +  GV 
Sbjct: 104 DVLPSFGSLSALIE--CFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVF 161

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            AM L+ ++  K   P++VSYN L+ GLCK  + +EA+    ++ + G  PN V+   L+
Sbjct: 162 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 221

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC +GR +EA ELL  M        +V Y  LI     +G  D   ++ DEM+     
Sbjct: 222 DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 281

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI 399
            +  +Y+ ++  LC  G+       L+ M      P+  TY GL   LC  G+   A  +
Sbjct: 282 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           +  +  K        Y  +++ LC++G    AF++L  M + G   D  TY++L++GLC 
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401

Query: 460 EGLIEEALEIFVVM--EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           +G ++EAL++F  M   E   +P+V  FN L+ GLCK  R   ++++ + M++KG   N 
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 461

Query: 518 TTYTILVEGIAHQDELELSAEVLKEL 543
            TY +L+ G     +++ + E+ K++
Sbjct: 462 VTYNMLLGGCLKAGKIKEAMELWKQV 487



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 152/291 (52%), Gaps = 2/291 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS--GIIPDASSYTY 138
           DAF  L  M+ KG K DVV    L+  LC   K+ +A+K+   M  +   + P+  ++  
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 431

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  LCK+G +  A+++  KM   G   N VTYN L+ G    G + ++++   +++  G
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
            VPN+FTYS L++   K R ++ A  L  ++   G  P L  YN L+  LCKEG  E+A 
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+++ +   EP+++S+N ++      G ++   EL  +M      P  +T++ LI  L
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 611

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +  G+ D A   L+ MV   F P A  Y+ ++  L S+G    ++  L QM
Sbjct: 612 SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 662



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 130/279 (46%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L  A     +MV KG   ++V    LL    KA K+K+A+++ + ++  G +P++ 
Sbjct: 438 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 497

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++  CK   +  A  L  +M  +G       YN+L+  LC  G+L Q+      +
Sbjct: 498 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                 P+  +++ +++   K        +L   ++  G +P+ ++++ L+  L K G  
Sbjct: 558 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGEL 617

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA      + + GF P+ + Y+ LL+ L  +G   E   LL +M            + +
Sbjct: 618 DEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTI 677

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +  L +  +    +++L    +G    ++ S N ++ +L
Sbjct: 678 LTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 716



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 62/114 (54%)

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
            F ++  + K GFT + +  + +++GLC  G + EA+ +   M      PD+ ++N L+ 
Sbjct: 128 GFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLIN 187

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           GLCK+++   ++ +   M   G  PN  T T L++G+     ++ + E+L+ ++
Sbjct: 188 GLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 252/498 (50%), Gaps = 13/498 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + +A   +  M  K   PD+V    L+  LCKA K+K+A+ ++  M ++G  P++ 
Sbjct: 10  RNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 69

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + T L++ LCK G +  AM+L+E M+  G+  + V Y +L+ G C  GNL++  +  D +
Sbjct: 70  TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 129

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG+  N  TYS L+    +      A  +L+ +   G  P++V+Y  L+ GLCK+GR 
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+     +  KG EP+ V+YN+LL  LC EG   +A ++L  M    +   +VTYN L
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249

Query: 315 IGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +  L   GK D ALK+ + M        P+  ++N +I  LC EG++   VK   +M  +
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309

Query: 373 RCKPNEGTYNGLAMLC-GVGKVQEAFAI---IQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
               N  TYN L   C   GK++EA  +   +  LG   NS     Y  +I   C+    
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT---YSILIDGFCKMRML 366

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A  L  EM  +G  P  + Y++L+  LC EG +E+A  +F  M   + +PD+ +FN +
Sbjct: 367 NIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTM 426

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + G  K+       E+   M+E G  P+  T++ L+  ++   EL+ +   L+    R V
Sbjct: 427 IDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE----RMV 482

Query: 549 VSESAVERLVMQYDFEGI 566
            S    + LV     +G+
Sbjct: 483 ASGFTPDALVYDSLLKGL 500



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 228/448 (50%), Gaps = 7/448 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +L  LC+   + +A+ ++  M    + PD  SY  L+N LCK   +  A+ L+ +ME  G
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N+VT  +L+ GLC  G ++++++ L+ + +KG   +   Y  L+        +    
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L D+++ KG   N+V+Y+ L+ GLC+ G+ +EA      +   G  P+VV+Y  L+  L
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C +GR   A +LL  M      P+ VTYN+L+  L   G    A K+L  M++   +   
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMF-HRRC-KPNEGTYNGL-AMLCGVGKVQEAFAII 400
            +YN ++  LC +GKVD  +K  + MF +  C +PN  T+N L   LC  G++ +A  I 
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + +  K +      Y  ++    + GK  +A +L  ++   GF P+S+TYS LI G C  
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 363

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            ++  A  +F  M  +   P + ++N L+  LCK    + +  +FQ M      P+  ++
Sbjct: 364 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 423

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQV 548
             +++G     + +     +KELQ++ V
Sbjct: 424 NTMIDGTLKAGDFQF----VKELQMKMV 447



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 230/472 (48%), Gaps = 7/472 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D ++++A   LE M  KG   DVV    L+   C    + +  ++ + M+  GI 
Sbjct: 76  DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 135

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  +Y+ LV+ LC+ G    A  ++  M ++G   + VTY  L+ GLC  G    ++  
Sbjct: 136 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 195

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ +++KG  P+  TY+ LL    KE  V  A K+L  +I KG K ++V+YN L+ GLC 
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255

Query: 251 EGRTEEAIRFFRDL--PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           +G+ +EA++ F  +       EPNV ++N+L+  LC EGR  +A ++  +M        +
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 315

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VTYN+L+G     GK   A+++  +++   F P++ +Y+ +I   C    +++      +
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 375

Query: 369 MFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M      P    YN L A LC  G +++A ++ Q +GN         +  +I    + G 
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
                +L  +M + G  PD+ T+S+LI  L   G ++EA      M    + PD   +++
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPN----ETTYTILVEGIAHQDELEL 535
           LL GL     T   + +   M  KG + +     T  T L   I   D +EL
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL 547



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 197/376 (52%), Gaps = 3/376 (0%)

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N +++GLC  G + +++  +  + +K + P+  +Y+ L+    K + +  A+ LL ++ A
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G  PN V+   L+ GLCK+GR +EA+     +  KGF+ +VV Y  L+   C  G  + 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
             EL  EM G   S  +VTY+ L+  L   G+   A  VL+ M +    P   +Y  +I 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC +G+    +  L+ M  +  +P+  TYN  L+ LC  G V +AF I++ +  K   +
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEM--TKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
               Y  ++  LC KGK  +A +L   M   +    P+ +T++ LI GLC EG + +A++
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           I   M +     ++  +N LL G  K+ +   ++E+++ +++ G +PN  TY+IL++G  
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361

Query: 529 HQDELELSAEVLKELQ 544
               L ++  +  E++
Sbjct: 362 KMRMLNIAKGLFCEMR 377



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 35/276 (12%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L  A     +MV KG   ++V    LL    KA K+K+A+++ + ++  G +P++ 
Sbjct: 292 KEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 351

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS------- 187
           +Y+ L++  CK   +  A  L  +M  +G       YN+L+  LC  G+L Q+       
Sbjct: 352 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 411

Query: 188 ------------------------LQFLD----RLIQKGLVPNAFTYSFLLEAAYKERGV 219
                                    QF+     ++++ GL P+A T+S L+    K   +
Sbjct: 412 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGEL 471

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A   L+ ++A G  P+ + Y+ LL GL  +G T E I     + +KG   +    + +
Sbjct: 472 DEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTI 531

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           L  LC   +  +  ELL     G      ++ N L+
Sbjct: 532 LTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 567


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 236/462 (51%), Gaps = 9/462 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            + ++AF     M  KG  P +    ++L    K N+M+ A  +   M    I     ++
Sbjct: 171 RRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTF 230

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +VN LCK+G +  A + +  ME  G+  N V+YN+++ G    GN+  + + LD +  
Sbjct: 231 NIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV 290

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ P+++TY  L+    KE  +  A  L D ++  G  PN V+YN L+ G C +G  E 
Sbjct: 291 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 350

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A  +  ++  KG  P+V +YN+L+ +L MEGR  EA++++ EM      P  +TYNILI 
Sbjct: 351 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 410

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQMFHR 372
             +  G    A  + +EM+     P+  +Y  +I  L    ++    DL  K LDQ    
Sbjct: 411 GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ---- 466

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+   +N +    C  G V+ AF +++ +  K     +  +  ++   CR+GK  +A
Sbjct: 467 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             LL EM + G  PD  +Y++LI G    G I++A  +   M    + P +  +NAL+  
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           LCK++  DL+ E+ + M+ KG  P+++TY  L+EG+ + D L
Sbjct: 587 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 218/480 (45%), Gaps = 37/480 (7%)

Query: 96  PDVVQA--TNLLYDLCKANKMKKAIKVMEMMVSSGI------IPDASSYTYLVNCLCKKG 147
           P++  A  +N+LY+LC   ++          VS  I        D  SY   V  L +  
Sbjct: 69  PNLTPALISNVLYNLCSKPQL----------VSDFIHHLHPHCLDTKSYCLAVVLLARLP 118

Query: 148 NVGYAMQLVEKMEDYGYPTN------------------TVTYNSLVRGLCMLGNLNQSLQ 189
           +   A+QL++++      TN                  ++ ++ LVR  C L   +++ +
Sbjct: 119 SPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFK 178

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
               + +KG+VP   T + +L    K   +  A  L  ++        + ++N+++  LC
Sbjct: 179 CFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLC 238

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           KEG+ ++A  F   +   GF+PNVVSYN ++      G  E A  +L  M      P   
Sbjct: 239 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 298

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  LI  +   G+ + A  + D+MV+    P+A +YN +I   C++G ++      D+M
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 358

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +   P+  TYN L   L   G++ EA  +I+ +  K        Y  +I    R G  
Sbjct: 359 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 418

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +AF L  EM   G  P   TY+SLI  L     ++EA ++F  + +    PDV  FNA+
Sbjct: 419 KKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 478

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + G C +   + +  + + M  K   P+E T+  L++G   + ++E +  +L E++ R +
Sbjct: 479 VDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGI 538



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 34/279 (12%)

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           + +++L+R  C   R +EA +    M      P I T N ++       + + A  +  E
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
           M + R   +  ++N ++  LC EGK+                                K 
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLK-------------------------------KA 246

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +E    ++ LG K N      Y  +I     +G    A ++L  M   G  PDSYTY SL
Sbjct: 247 REFIGFMEGLGFKPNVVS---YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 303

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G+C EG +EEA  +F  M E    P+   +N L+ G C     + +      M++KG 
Sbjct: 304 ISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 363

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           MP+ +TY +LV  +  +  +  + +++KE++ + ++ ++
Sbjct: 364 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 402



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R R+ K+ +A + L+ M  +G KPD +    L+    +   +K A +V + M+S G  P 
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 576

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
             +Y  L+ CLCK      A +L+++M + G   +  TY SL+ G   +GN++
Sbjct: 577 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG---MGNVD 626


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 243/470 (51%), Gaps = 1/470 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P +++   ++  L K      AI + + M   GI PD  +   L+NC C  G + ++  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + K+   GY  NT+T N+L++GLC+ G + +SL F D+++ +G   +  +Y+ LL    K
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                +A+KLL  I  +  +PN+V YN ++ GLCK+    EA   + ++ ++G  PNV++
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ L+   C+ G+  EA  LL EM   + +P + TY IL+ +L   GK   A  +L  M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           K   +P+  SYN ++   C  G+V    +    M  +   PN  +YN +   LC   +V 
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  +++ + +K        Y  +I   C+ G+   A  LL EM   G   D  TY+SL+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
             LC    +++A  +F+ M+E   +P+   + AL+ GLCK  R   + ++FQ ++ KG  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
            N  TY +++ G+  +  L+ +  +  +++    + ++    ++++  FE
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFE 477



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 238/459 (51%), Gaps = 1/459 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M  KG +PD+     L+   C   +M  +  V+  ++  G  P+  +   L+  LC 
Sbjct: 33  FKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCL 92

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG V  ++   +K+   G+  + V+Y +L+ GLC +G    +L+ L  +  +   PN   
Sbjct: 93  KGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVM 152

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++   K++ V+ A  L  ++ A+G  PN+++Y+ L+ G C  G+  EA     ++ 
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI 212

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            K   PNV +Y IL+ +LC EG+ +EA  LLA M      P +V+YN L+      G+  
Sbjct: 213 LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQ 272

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           +A ++   MV+    P+  SYN +I RLC   +VD  +  L ++ H+   PN  TY+ L 
Sbjct: 273 NAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLI 332

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C +G++  A  +++ + ++   +    Y  ++ +LC+     +A  L  +M + G  
Sbjct: 333 DGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 392

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+ YTY++LI GLC  G  + A ++F  +     + +V  +N ++ GLCK    D +L +
Sbjct: 393 PNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAM 452

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              M E G +P+  T+ I++  +  +D+ + + ++L E+
Sbjct: 453 KSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 218/431 (50%), Gaps = 1/431 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +F  L +++  G++P+ +    L+  LC   ++KK++   + +V+ G   D  SY  L+N
Sbjct: 64  SFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLN 123

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G    A++L+  +ED     N V YN+++ GLC    +N++      +  +G+ P
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TYS L+        +  A  LL+++I K   PN+ +Y +L+  LCKEG+ +EA    
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G +PNVVSYN L+   C+ G  + A ++   M     +P + +YNI+I  L   
Sbjct: 244 AVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKS 303

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D A+ +L E++     P+  +Y+ +I   C  G++   +  L +M+HR    +  TY
Sbjct: 304 KRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTY 363

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L   LC    + +A A+   +  +     +  Y  +I  LC+ G+   A +L   +  
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLV 423

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G   + +TY+ +I GLC EG+++EAL +   MEE    PD   F  ++  L +  + D 
Sbjct: 424 KGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDK 483

Query: 501 SLEVFQMMIEK 511
           + ++   MI K
Sbjct: 484 AEKLLHEMIAK 494



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 169/323 (52%), Gaps = 1/323 (0%)

Query: 60  TKPNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI 118
           T+PN    N   D   +D  +N+A+     M ++G  P+V+  + L+Y  C A ++ +A 
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAF 205

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
            ++  M+   I P+  +YT L++ LCK+G V  A  L+  M   G   N V+YN+L+ G 
Sbjct: 206 GLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGY 265

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C++G +  + Q    ++QKG+ PN ++Y+ +++   K + V  AM LL +++ K   PN 
Sbjct: 266 CLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNT 325

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+Y+ L+ G CK GR   A+   +++  +G   +VV+Y  LL +LC     ++A  L  +
Sbjct: 326 VTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P   TY  LI  L   G+  +A K+   ++    R +  +YN +I+ LC EG 
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGM 445

Query: 359 VDLVVKCLDQMFHRRCKPNEGTY 381
           +D  +    +M    C P+  T+
Sbjct: 446 LDEALAMKSKMEENGCIPDAVTF 468



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 146/281 (51%), Gaps = 3/281 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L  M  +G KP+VV    L+   C   +++ A ++   MV  G+ 
Sbjct: 228 DALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVN 287

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SY  +++ LCK   V  AM L+ ++       NTVTY+SL+ G C LG +  +L  
Sbjct: 288 PNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDL 347

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +  +G   +  TY+ LL+A  K + +  A  L   +  +G +PN  +Y  L+ GLCK
Sbjct: 348 LKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK 407

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR + A + F+ L  KG   NV +YN+++  LC EG  +EA  + ++M+     P  VT
Sbjct: 408 GGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVT 467

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKG---RFRPSAASYNP 348
           + I+I SL    + D A K+L EM+     RFR      +P
Sbjct: 468 FEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDFHGERSP 508



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 140/252 (55%), Gaps = 15/252 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV KG  P+V     ++  LCK+ ++ +A+ ++  ++   ++P+  +Y+ L++  CK G 
Sbjct: 281 MVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGR 340

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+ L+++M   G P + VTY SL+  LC   NL+++     ++ ++G+ PN +TY+ 
Sbjct: 341 ITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTA 400

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K      A KL   ++ KG + N+ +YNV+++GLCKEG  +EA+     +   G
Sbjct: 401 LIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENG 460

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG-----K 323
             P+ V++ I++RSL  + + ++A +LL EM   D          L+    +HG     +
Sbjct: 461 CIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKD----------LLRFRDFHGERSPNE 510

Query: 324 TDHALKVLDEMV 335
            D A K+L EM+
Sbjct: 511 NDKAEKLLHEMI 522



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 5/163 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L+ A     +M  +G +P+    T L+  LCK  + K A K+ + ++  G  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  +Y  +++ LCK+G +  A+ +  KME+ G   + VT+  ++R L      +++ + 
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKL 487

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L  +I K L+       F  E +  E     A KLL ++IAKG
Sbjct: 488 LHEMIAKDLLR---FRDFHGERSPNEN--DKAEKLLHEMIAKG 525


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 235/480 (48%), Gaps = 1/480 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++DA     RMV     P       LL  + +      AI +   + S GI P  +
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L+NC   + +  +A  L+  +   GY  N VT+N+++ G C+ G + ++L F   L
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G + + FTY  L+    K   + AA+ LL ++     +PNLV Y+ L+ GLCK+G  
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+     +  +G   + V+YN L+   C  GRW+E  +LL +M   +  P   T+NIL
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   G+   A  VL  M K   +P   +YN ++   CS   V    +  ++M  R  
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+   YN L    C    V EA  + + L NK        Y  +I  LC  G+     +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM      PD  TY+ LI  LC EG I EAL + V+M +   KP++  +NA++ G C
Sbjct: 392 LLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC 451

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
                +++ ++F  M++ G  P+   Y +L+ G    + ++ +  + KE++ + ++ + A
Sbjct: 452 LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA 511



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 237/461 (51%), Gaps = 8/461 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + ++++G+  D      L+  L K  ++K A+ +++ M  S + P+   Y+ L++ LCK 
Sbjct: 149 QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKD 208

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V  A+ L  ++ + G   + VTYNSL+ G C +G   +  Q L +++++ + P+ +T+
Sbjct: 209 GFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L++A  KE  +  A  +L  +  +G KP++V+YN L+ G C      EA   F  +  
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G EP+V++YN+L+   C     +EA  L  E+   +  PTI +YN LI  L   G+  H
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
             K+LDEM      P   +YN +I  LC EG++   +  L  M  +  KPN  TYN  AM
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN--AM 446

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQE----FYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           + G   ++    + + + N+   S  E     Y  +I   C+     +A  L  EM    
Sbjct: 447 MDGYC-LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD  +Y+SLI GLC  G I    E+   M +    PDV  +N LL   CK++  D ++
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +F+ ++E G  P+  T   +V+ +   ++L+++ + LK L
Sbjct: 566 SLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHL 605



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 231/481 (48%), Gaps = 2/481 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  ++DA     ++  +G   D V   +L+   C   + ++  +++  MV   + 
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD 262

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  L++ LCK+G +  A  ++  M   G   + VTYN+L+ G C   N++++ + 
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            +R++++GL P+   Y+ L++   K + V  AM L  ++  K   P + SYN L+ GLC 
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR     +   ++      P+VV+YNIL+ +LC EGR  EA  +L  M      P IVT
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN ++         + A  + + MVK    P   +YN +I   C    VD  +    +M 
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           H+   P+  +YN L   LC +G++     ++  + +   S     Y  ++ + C+     
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFD 562

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A  L  ++ + G  PD YT  +++  LC    ++ A +    +  +   P+V  +  L+
Sbjct: 563 KAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILI 621

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             LCK      ++ +   M +  + P+  T+ I++  +  ++E + + ++ +E+  R +V
Sbjct: 622 NALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681

Query: 550 S 550
           +
Sbjct: 682 N 682


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 244/501 (48%), Gaps = 36/501 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA  Q   M+   + P +++   +L  L K      AI + + M   GI PD  + + 
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NC C  G + ++  ++ K+   GY  NT+   +L++GLC+ G + +SL F D+++ +G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N  +Y  LL    K      A+KLL  I  +  +P++V YN ++ GLCK+    EA 
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292

Query: 259 RFFRDLPSKGFEPNVVSYN-----------------------------------ILLRSL 283
            F+ ++ S+G  P+V++Y+                                   IL+ +L
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C EG+ +EA  LL  M      P +VTY+ L+      G+  +A ++   MV+    PS 
Sbjct: 353 CKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSV 412

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            SYN +I  LC    VD  +  L +M H+   PN  TYN L   LC  G++  A  +++ 
Sbjct: 413 CSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKE 472

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           L ++   +    Y  ++  LC+     +A  L  +M + G  P+ YTY++LI GLC    
Sbjct: 473 LHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGAR 532

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++ A ++F  +       DV  +N ++ GLCK    D +L +   M + G +P+  T+ I
Sbjct: 533 LKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEI 592

Query: 523 LVEGIAHQDELELSAEVLKEL 543
           ++  +  +DE + + ++L E+
Sbjct: 593 IIRSLFEKDENDKAEKLLHEM 613



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 220/478 (46%), Gaps = 56/478 (11%)

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG----- 177
           M  + GI+P+  + + L+NCL   G + ++  ++ K+   GY  N++T  +L++G     
Sbjct: 1   MEAAKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCA 60

Query: 178 ---------------LCMLGNLNQSL--------------------------------QF 190
                          + +  +L+ S+                                QF
Sbjct: 61  IKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQF 120

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              L+ +   P+   +  +L +  K +    A+ L   +  KG +P+LV+ ++L+   C 
Sbjct: 121 NGMLLMRN-TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+   +      +   G++PN +    L++ LC++G  +++     ++         V+
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+  L   G+T  A+K+L  +     RP    YN II  LC +  V+       +M 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKT 428
            R   P+  TY+ L    C  G++  AF+++  +  K N +P  + Y  +I +LC++GK 
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK-NINPDVYTYTILIDALCKEGKL 358

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A  LL  MTK G  P+  TYS+L+ G C+ G +  A +IF  M + +  P V ++N +
Sbjct: 359 KEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIM 418

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           + GLCK +  D ++ + + M+ K  +PN  TY  L++G+     +  + +++KEL  R
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHR 476



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 154/311 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +N+A+     M S+G  PDV+  + L+   C A ++  A  ++  M    I 
Sbjct: 280 DGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L++ LCK+G +  A  L+  M   G   N VTY++L+ G C++G ++ + Q 
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++Q  + P+  +Y+ ++    K + V  AM LL +++ K   PN V+YN L+ GLCK
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR   A+   ++L  +G   +V++Y  LL  LC     ++A  L  +M      P   T
Sbjct: 460 SGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYT 519

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI  L    +  +A K+   ++         +YN +I  LC EG +D  +    +M 
Sbjct: 520 YTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579

Query: 371 HRRCKPNEGTY 381
              C P+  T+
Sbjct: 580 DNGCIPDAVTF 590



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 149/286 (52%), Gaps = 3/286 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A   L  M  +G KP+VV  + L+   C   ++  A ++   MV + + 
Sbjct: 350 DALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVN 409

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   SY  ++N LCK  +V  AM L+ +M       NTVTYNSL+ GLC  G +  +L  
Sbjct: 410 PSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDL 469

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +  L  +G   +  TY+ LL+   K + +  A+ L   +  +G +PN  +Y  L+ GLCK
Sbjct: 470 MKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 529

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R + A + F+ +  KG   +V +YN+++  LC EG  +EA  + ++M+     P  VT
Sbjct: 530 GARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVT 589

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV-KG--RFRPSAASYNPIIARL 353
           + I+I SL    + D A K+L EM+ KG   FR      +P+  ++
Sbjct: 590 FEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFRNFHGERSPVTNKV 635


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 234/473 (49%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M S G  PDV     L+   C  N++  A  V+  ++  G  PD +++T L+  LC +G
Sbjct: 94  QMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEG 153

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +G A+ L +KM   G+  N VTY +L+ GLC +GN N +++ L  + Q    P+   Y+
Sbjct: 154 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 213

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            ++++  K+R V  A  L   ++ +G  P++ +Y  L+  LC     +        + + 
Sbjct: 214 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 273

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              P+VV ++ ++ +LC EG+  EA++++  M      P +VTYN L+       + D A
Sbjct: 274 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 333

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           +KV D MV   + P+  SYN +I   C   ++D      ++M  +   PN  TYN L   
Sbjct: 334 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX 393

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C VG++Q+A A+   +           Y+ ++  LC+K    +A  LL  +      PD 
Sbjct: 394 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 453

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             Y+ +I G+C  G +E A +IF  +     +P+V  +  ++ GLC+    D + ++F  
Sbjct: 454 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 513

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           M   G  P+  TY  + +G+    E   + ++L+E+  R   ++ +   L+++
Sbjct: 514 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 566



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 226/466 (48%), Gaps = 2/466 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     RM+     P  V    LL  + K  +      +   M S GI PD  +   
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    +G+A  ++ K+   G+  +T T+ +L+RGLC+ G +  +L   D++I +G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K    +AA++LL  +     +P++V Y  ++  LCK+ +  EA 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  +  +G  P++ +Y  L+ SLC    W+    LL +M      P +V ++ ++ +L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A  V+D M+     P+  +YN ++   C + ++D  VK  D M H    PN 
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +YN L    C + ++ +A  + + +  K+   P       +   C  G+   A  L +E
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKE-LIPNTVTYNTLMHXCHVGRLQDAIALFHE 408

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M  +G  PD  TY  L+  LC +  ++EA+ +   +E  +  PD+  +  ++ G+C++  
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + + ++F  +  KG  PN  TYTI++ G+  +  L+ + ++  E+
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 239/476 (50%), Gaps = 11/476 (2%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++L  AF  L +++  GH+PD    T L+  LC   K+  A+ + + M+  G  P+  +Y
Sbjct: 118 NRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTY 177

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N LCK GN   A++L+  ME      + V Y S++  LC    + ++     +++ 
Sbjct: 178 GTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVG 237

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+ P+ FTY+ L+ +            LL+ +I     P++V ++ ++  LCKEG+  E
Sbjct: 238 QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITE 297

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      +  +G EPNVV+YN L+   C++   +EA ++   M     +P +++YN LI 
Sbjct: 298 AHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLIN 357

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A  + +EM +    P+  +YN ++   C  G++   +    +M      P
Sbjct: 358 GYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMVAHGQIP 416

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY  L   LC    + EA A+++++         + Y  VI  +CR G+   A  + 
Sbjct: 417 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 476

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             ++  G  P+  TY+ +I GLC  GL++EA ++F+ M+     PD   +N +  GL ++
Sbjct: 477 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 536

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +    ++++ Q M+ +G   + +T T+LVE +   D+L+ S        ++Q++SE
Sbjct: 537 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKLDQS--------VKQILSE 583



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 193/400 (48%), Gaps = 35/400 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF    +MV +G  PD+   T+L++ LC   + K    ++  M++S I+
Sbjct: 217 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 276

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   ++ +V+ LCK+G +  A  +V+ M   G   N VTYN+L+ G C+   ++++++ 
Sbjct: 277 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 336

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++  G  PN  +Y+ L+    K + +  A  L +++  K   PN V+YN L+   C 
Sbjct: 337 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCH 395

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++AI  F ++ + G  P++ +Y ILL  LC +   +EA  LL  ++G +  P I  
Sbjct: 396 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 455

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y I+I  +   G+ + A  +   +     RP+  +Y  +I  LC  G +D   K   +M 
Sbjct: 456 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C P+  TYN +    G+ + +EA                                 +
Sbjct: 516 GNGCSPDGCTYNTITQ--GLLQNKEAL--------------------------------R 541

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           A QLL EM   GF+ D  T + L+  LC + L +   +I 
Sbjct: 542 AIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 581



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 140/302 (46%), Gaps = 38/302 (12%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   ++ M+ +G +P+VV    L+   C  ++M +A+KV + MV +G  
Sbjct: 287 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 346

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SY  L+N  CK   +  A  L E+M       NTVTYN+L+   C +G L  ++  
Sbjct: 347 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIAL 405

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL------------------------ 226
              ++  G +P+  TY  LL+   K+  +  AM LL                        
Sbjct: 406 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 465

Query: 227 -----------DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                       ++ +KG +PN+ +Y +++ GLC+ G  +EA + F ++   G  P+  +
Sbjct: 466 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCT 525

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK-VLDEM 334
           YN + + L        A +LL EM     S  + T  +L+  L    K D ++K +L E 
Sbjct: 526 YNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKLDQSVKQILSEF 584

Query: 335 VK 336
           V+
Sbjct: 585 VQ 586



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 60/130 (46%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  ++TS+ +  +    F L  +M  +G  PD YT + LI   C    +  A  +   + 
Sbjct: 72  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKIL 131

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +  ++PD   F  L+ GLC   +   +L +F  MI +G  PN  TY  L+ G+       
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191

Query: 535 LSAEVLKELQ 544
            +  +L+ ++
Sbjct: 192 AAIRLLRSME 201


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 236/462 (51%), Gaps = 9/462 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            + ++AF     M  KG  P +    ++L    K N+M+ A  +   M    I     ++
Sbjct: 193 RRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTF 252

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +VN LCK+G +  A + +  ME  G+  N V+YN+++ G    GN+  + + LD +  
Sbjct: 253 NIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV 312

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ P+++TY  L+    KE  +  A  L D ++  G  PN V+YN L+ G C +G  E 
Sbjct: 313 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 372

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A  +  ++  KG  P+V +YN+L+ +L MEGR  EA++++ EM      P  +TYNILI 
Sbjct: 373 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 432

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQMFHR 372
             +  G    A  + +EM+     P+  +Y  +I  L    ++    DL  K LDQ    
Sbjct: 433 GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ---- 488

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+   +N +    C  G V+ AF +++ +  K     +  +  ++   CR+GK  +A
Sbjct: 489 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 548

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             LL EM + G  PD  +Y++LI G    G I++A  +   M    + P +  +NAL+  
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 608

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           LCK++  DL+ E+ + M+ KG  P+++TY  L+EG+ + D L
Sbjct: 609 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 650



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 218/480 (45%), Gaps = 37/480 (7%)

Query: 96  PDVVQA--TNLLYDLCKANKMKKAIKVMEMMVSSGI------IPDASSYTYLVNCLCKKG 147
           P++  A  +N+LY+LC   ++          VS  I        D  SY   V  L +  
Sbjct: 91  PNLTPALISNVLYNLCSKPQL----------VSDFIHHLHPHCLDTKSYCLAVVLLARLP 140

Query: 148 NVGYAMQLVEKMEDYGYPTN------------------TVTYNSLVRGLCMLGNLNQSLQ 189
           +   A+QL++++      TN                  ++ ++ LVR  C L   +++ +
Sbjct: 141 SPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFK 200

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
               + +KG+VP   T + +L    K   +  A  L  ++        + ++N+++  LC
Sbjct: 201 CFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLC 260

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           KEG+ ++A  F   +   GF+PNVVSYN ++      G  E A  +L  M      P   
Sbjct: 261 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 320

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  LI  +   G+ + A  + D+MV+    P+A +YN +I   C++G ++      D+M
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 380

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +   P+  TYN L   L   G++ EA  +I+ +  K        Y  +I    R G  
Sbjct: 381 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 440

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +AF L  EM   G  P   TY+SLI  L     ++EA ++F  + +    PDV  FNA+
Sbjct: 441 KKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 500

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + G C +   + +  + + M  K   P+E T+  L++G   + ++E +  +L E++ R +
Sbjct: 501 VDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGI 560



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 34/279 (12%)

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           + +++L+R  C   R +EA +    M      P I T N ++       + + A  +  E
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
           M + R   +  ++N ++  LC EGK+                                K 
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLK-------------------------------KA 268

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +E    ++ LG K N      Y  +I     +G    A ++L  M   G  PDSYTY SL
Sbjct: 269 REFIGFMEGLGFKPNVVS---YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 325

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G+C EG +EEA  +F  M E    P+   +N L+ G C     + +      M++KG 
Sbjct: 326 ISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 385

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           MP+ +TY +LV  +  +  +  + +++KE++ + ++ ++
Sbjct: 386 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 424



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R R+ K+ +A + L+ M  +G KPD +    L+    +   +K A +V + M+S G  P 
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 598

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
             +Y  L+ CLCK      A +L+++M + G   +  TY SL+ G   +GN++
Sbjct: 599 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG---MGNVD 648


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 240/474 (50%), Gaps = 7/474 (1%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R + H+      + E + S   +PDV     ++   C A  +  A++++E M S+G  PD
Sbjct: 89  RCKKHREAGDLFRSELLAS--CEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPD 146

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           A ++T ++  +   G++  AM  +  M   G   N VTY +L+        L ++++ L+
Sbjct: 147 AFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLE 203

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            + ++G  PN  TY+ L++A  K   V AA  ++  +I  G  PN++++N L+ G CK G
Sbjct: 204 EMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRG 263

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             ++A +    + +KG  PNVV+Y+ L+  LC   ++ EA E+L EM     +P   TY+
Sbjct: 264 NVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYS 323

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  L    K + A ++L  M      P    Y+ II   C  GK+    K L +M  +
Sbjct: 324 ALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 383

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
           R  P+  TYN  +  LC +GK+ EA  I++ +    +  P    Y  VI  LC+     +
Sbjct: 384 RKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVE 443

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +LL  M K G  PD  TY+++I GLC  G +EEA  +   M+     P+V  +  L+ 
Sbjct: 444 AQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLIS 503

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           GLCK+R+ D +  V + M   G  PN  TY  +V G+     ++ + ++++ ++
Sbjct: 504 GLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 557



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 235/430 (54%), Gaps = 13/430 (3%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ + S G  P+VV  T L+    +A K+++A+K++E M   G  P+  +Y  LV+ LCK
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              VG A  +V+KM + G+  N +T+NSLV G C  GN++ + + L  ++ KG+ PN  T
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS L++   K +    A ++L+++  +G  P+  +Y+ L+ GLCK  + EEA +  R + 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+VV Y+ ++ + C  G+  EA + L EM    +SP +VTYN +I  L   GK  
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 326 HALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDLVV---KCLDQMFHRRCKPNEGTY 381
            A  +L++M + G   P   +Y+ +I  LC   K D++V   K LD+M    C P+  TY
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLC---KSDMLVEAQKLLDRMCKAGCNPDVVTY 463

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             +   LC  G+++EA  ++Q +     +     Y  +I+ LC+  K  +A +++ EM  
Sbjct: 464 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 523

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE--YDYKPDVDNFNALLLGLCKSRRT 498
            G  P+  TY++++ GLC+ G I+EA ++   M++   +  PD   +  ++  L  S   
Sbjct: 524 AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS--- 580

Query: 499 DLSLEVFQMM 508
           DL  E  Q++
Sbjct: 581 DLVQEAEQLL 590



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 236/472 (50%), Gaps = 5/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL  AF +       G         +LL  L +  K ++A  +    + +   PD  
Sbjct: 54  KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVC 113

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +++  C  G++  A++L+E+M+  G+  +  T+  ++  +   G+L+ +   +D L
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHL 170

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G  PN  TY+ L+ A  + + +  AMKLL+++  +G  PNLV+YNVL+  LCK    
Sbjct: 171 RSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMV 230

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A    + +   GF PNV+++N L+   C  G  ++A +LL  M      P +VTY+ L
Sbjct: 231 GAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 290

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K   A +VL+EM      P A +Y+ +I  LC   K++   + L +M    C
Sbjct: 291 IDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 350

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+   Y+ +    C  GK+ EA   +Q +  ++ S     Y  VI  LC+ GK  +A  
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 410

Query: 434 LLYEMTKYG-FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L +M + G   PD  TYS++I GLC   ++ EA ++   M +    PDV  +  ++ GL
Sbjct: 411 ILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGL 470

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           CK  R + +  + Q M   G  PN  TYT L+ G+    +++ +  V++E++
Sbjct: 471 CKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMR 522



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 205/404 (50%), Gaps = 4/404 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL +A   LE M  +G  P++V    L+  LCK + +  A  V++ M+  G  P+  
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 250

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  LV+  CK+GNV  A +L+  M   G   N VTY++L+ GLC      ++ + L+ +
Sbjct: 251 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 310

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+ P+AFTYS L+    K   +  A ++L  +   G  P++V Y+ ++   CK G+ 
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNI 313
            EA +  +++  +   P+VV+YN ++  LC  G+  EA  +L +M + GD  P +VTY+ 
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYST 430

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L        A K+LD M K    P   +Y  II  LC  G+++     L  M    
Sbjct: 431 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 490

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  TY  L + LC   KV EA  +++ + N         Y  ++  LC  G+  +A 
Sbjct: 491 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 550

Query: 433 QLLYEMT--KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           QL+  M   +   +PD+ TY +++  L    L++EA ++   M+
Sbjct: 551 QLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 133/298 (44%), Gaps = 39/298 (13%)

Query: 257 AIRFFRDLPSK--GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           A+ FFR  P+   GF     S+N LL+ L    +  EA +L          P + +YNI+
Sbjct: 59  ALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIV 118

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G    AL++L+EM    F P A ++ PII  + + G +D     +D +    C
Sbjct: 119 ISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGC 175

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            PN  TY  L                                  I +  R  K  +A +L
Sbjct: 176 DPNVVTYTAL----------------------------------IAAFARAKKLEEAMKL 201

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L EM + G  P+  TY+ L+  LC   ++  A ++   M E  + P+V  FN+L+ G CK
Sbjct: 202 LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 261

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
               D + ++  +M+ KG  PN  TY+ L++G+    +   + EVL+E++ R V  ++
Sbjct: 262 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDA 319


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 227/438 (51%), Gaps = 2/438 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   +++ ++ G +PD V     ++ LC+   +  A+KVM++M+  G  PD  +Y 
Sbjct: 280 RVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYN 339

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++NCL K G +  A  +V +M D G   +T T+N+L+  LC    L ++L     L  K
Sbjct: 340 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVK 399

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+ +T++ L+ A  K    H  ++L +++ + G  P+ V+YN+L+  LC  G+   A
Sbjct: 400 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNA 459

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   +++ S G   + V+YN ++ +LC + R EEA E+  +MD    S + VT+N LI  
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDG 519

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + D A +++++MVK   +PS  +YN I+   C +G +      L+ M     + +
Sbjct: 520 LCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEID 579

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC  G+ Q A  +++ +  K      + Y  VI SL R+     A  L  
Sbjct: 580 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFR 639

Query: 437 EMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           EMT+ G  PD+ TY  + RGLC   G I+EA +  V M    + P+  +F  L  GL   
Sbjct: 640 EMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 699

Query: 496 RRTDLSLEVFQMMIEKGQ 513
              D  +   +++IEK +
Sbjct: 700 GMDDYLISAIELIIEKAK 717



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 227/454 (50%), Gaps = 1/454 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H++  A L LE M S    PD    T L+    +   ++ A++V   M+ +G  P   
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N  CK G V  A+  ++K    G+  + VTYN+ V  LC  G+++ +L+ +D +
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+G  P+ FTY+ ++    K   +  A  +++ ++ +G  P+  ++N L+  LC + R 
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+   R+L  KG  P+V ++NIL+ +LC  G       L  EM     +P  VTYNIL
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   GK  +AL +L EM       S  +YN II  LC + +++   +  DQM     
Sbjct: 447 IDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGI 506

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  T+N L   LC   ++ +A  +I+ +  +        Y  ++T  C++G   +A  
Sbjct: 507 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAAD 566

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  MT  GF  D  TY +LI GLC  G  + AL++   M     +P    +N ++  L 
Sbjct: 567 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 626

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +      +L +F+ M E G+ P+  TY I+  G+
Sbjct: 627 RRNNLRDALSLFREMTEVGEPPDALTYKIVFRGL 660



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 238/456 (52%), Gaps = 1/456 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  +G +PDVV    L+  LC+A++++ A+ ++E M S  + PD +++T L+    ++G+
Sbjct: 186 MTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGS 245

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+++  KM + G     VT N L+ G C +G +  +L ++ + I  G  P+  TY+ 
Sbjct: 246 IEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNT 305

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            +    +   V  A+K++D ++ +G  P++ +YN ++  L K G  +EA      +  +G
Sbjct: 306 FVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+  ++N L+ +LC + R EEA +L  E+     SP + T+NILI +L   G     +
Sbjct: 366 CLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++ +EM      P   +YN +I  LCS GK+   +  L +M    C  +  TYN +   L
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDAL 485

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   +++EA  +   +     S     +  +I  LC+  +   A +L+ +M K G  P +
Sbjct: 486 CKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSN 545

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+S++   C +G +++A +I   M    ++ DV  +  L+ GLCK+ RT ++L++ + 
Sbjct: 546 ITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 605

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M  KG  P    Y  +++ +  ++ L  +  + +E+
Sbjct: 606 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREM 641



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 227/442 (51%), Gaps = 2/442 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M+  G  P  V    L+   CK  +++ A+  ++  ++ G  PD  +Y   V+CLC+ G
Sbjct: 255 KMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNG 314

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +V +A+++++ M   G+  +  TYN+++  L   G L+++   +++++ +G +P+  T++
Sbjct: 315 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 374

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+ A   +  +  A+ L  ++  KG  P++ ++N+L+  LCK G     IR F ++ S 
Sbjct: 375 TLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS 434

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+ V+YNIL+  LC  G+   A +LL EM+      + VTYN +I +L    + + A
Sbjct: 435 GCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEA 494

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
            +V D+M       SA ++N +I  LC   ++D   + ++QM     +P+  TYN  L  
Sbjct: 495 EEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTH 554

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C  G +++A  I++++           Y  +I  LC+ G+T  A +LL  M   G  P 
Sbjct: 555 YCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPT 614

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR-TDLSLEVF 505
              Y+ +I+ L     + +AL +F  M E    PD   +  +  GLC+       + +  
Sbjct: 615 PKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFL 674

Query: 506 QMMIEKGQMPNETTYTILVEGI 527
             M+ KG MP  +++ +L EG+
Sbjct: 675 VEMVNKGFMPEFSSFRMLAEGL 696



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 231/460 (50%), Gaps = 2/460 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLC 144
           +  M  +GH+       + +    +  +   A+ ++   +++ G+  D + Y +L+N L 
Sbjct: 112 VREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLA 171

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           +   +     +  +M D G   + VT N+L++ LC    +  ++  L+ +    + P+  
Sbjct: 172 EGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDET 231

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T++ L++   +E  + AA+++   ++  G  P  V+ NVL+ G CK GR E+A+ + +  
Sbjct: 232 TFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKE 291

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            + GFEP+ V+YN  +  LC  G    A +++  M      P + TYN +I  L+ +G+ 
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 351

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           D A  ++++MV     P   ++N +I  LCS+ +++  +    ++  +   P+  T+N L
Sbjct: 352 DEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNIL 411

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC VG       + + + +   +  +  Y  +I  LC  GK   A  LL EM   G 
Sbjct: 412 INALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGC 471

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
              + TY+++I  LC +  IEEA E+F  M+ +        FN L+ GLCK++R D + E
Sbjct: 472 PRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATE 531

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + + M+++G  P+  TY  ++     Q +L+ +A++L+ +
Sbjct: 532 LIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM 571



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 146/281 (51%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++L +A      +  KG  PDV     L+  LCK       I++ E M SSG  PD  +Y
Sbjct: 384 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTY 443

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L++ LC  G +  A+ L+++ME  G P +TVTYN+++  LC    + ++ +  D++  
Sbjct: 444 NILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDA 503

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+  +A T++ L++   K + +  A +L++ ++ +G +P+ ++YN +LT  CK+G  ++
Sbjct: 504 HGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      + + GFE +VV+Y  L+  LC  GR + A +LL  M      PT   YN +I 
Sbjct: 564 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 623

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           SL        AL +  EM +    P A +Y  +   LC  G
Sbjct: 624 SLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 177/415 (42%), Gaps = 35/415 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P  + Y  ++  L   G       LV +M   G+        S V     L   + ++  
Sbjct: 87  PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDL 146

Query: 191 L-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           + ++L   G+  +   Y+ LL    +   +     + +++  +G +P++V+ N L+  LC
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           +  +   A+    ++ S    P+  ++  L++    EG  E A  +  +M     SPT V
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T N+LI      G+ + AL  + + +   F P   +YN  +  LC  G V   +K +D M
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 P+  TYN                                   VI  L + G+  
Sbjct: 327 LQEGHDPDVFTYN----------------------------------TVINCLSKNGELD 352

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A  ++ +M   G  PD+ T+++LI  LC +  +EEAL++   +      PDV  FN L+
Sbjct: 353 EAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILI 412

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             LCK     L + +F+ M   G  P+E TY IL++ +    +L  + ++LKE++
Sbjct: 413 NALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEME 467



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 119/232 (51%), Gaps = 4/232 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++ +A    ++M + G     V    L+  LCKA ++  A +++E MV  G+ 
Sbjct: 483 DALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQ 542

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +Y  ++   CK+G++  A  ++E M   G+  + VTY +L+ GLC  G    +L+ 
Sbjct: 543 PSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKL 602

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +  KG+ P    Y+ ++++ ++   +  A+ L  ++   G  P+ ++Y ++  GLC+
Sbjct: 603 LRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCR 662

Query: 251 EGR-TEEAIRFFRDLPSKGFEPNVVSYNIL---LRSLCMEGRWEEANELLAE 298
            G   +EA  F  ++ +KGF P   S+ +L   L +L M+     A EL+ E
Sbjct: 663 GGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIE 714



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/341 (22%), Positives = 151/341 (44%), Gaps = 3/341 (0%)

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           LL A  ++    AA+++L+  +A+    P+   Y  ++  L   G  +      R++  +
Sbjct: 59  LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLA-EMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           G E         + S     R+++A +L+  +++          YN L+  LA   +   
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
              V +EM     +P   + N +I  LC   +V   V  L++M      P+E T+  L  
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
                G ++ A  +   +     S  +     +I   C+ G+   A   + +    GF P
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEP 298

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  TY++ +  LC  G +  AL++  +M +  + PDV  +N ++  L K+   D +  + 
Sbjct: 299 DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 358

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             M+++G +P+ TT+  L+  +  Q+ LE + ++ +EL ++
Sbjct: 359 NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVK 399


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 264/513 (51%), Gaps = 10/513 (1%)

Query: 41  FIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLN----DAFLQL-----ERMVS 91
           F+   A  Q+ +   D V  + +   G   DT   +H LN     + ++L       M  
Sbjct: 119 FLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGE 178

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           +G KPDVV    L+  LC+A++++ A+ ++E M SSG+ PD +++T L+    ++G++  
Sbjct: 179 RGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKA 238

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A+++  +M + G     VT N L+ G C LG +  +L ++ + I  G  P+  TY+  + 
Sbjct: 239 ALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVN 298

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              +   V  A+K++D ++ +G  P++ +YN+++  LCK G+ EEA      +  +G  P
Sbjct: 299 GLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLP 358

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           ++ ++N L+ +LC   R EEA +L  ++     SP + T+NILI +L   G    AL++ 
Sbjct: 359 DITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLF 418

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGV 390
           +EM      P   +YN +I  LCS GK+   +  L +M    C  +  TYN +   LC  
Sbjct: 419 EEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKK 478

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
            +++EA  +   +  +  S     +  +I  LC+  +   A QL+ +M   G  P++ TY
Sbjct: 479 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITY 538

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +S++   C +G I++A +I   M    ++ DV  +  L+ GLCK+ RT ++L++ + M  
Sbjct: 539 NSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRI 598

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           KG       Y  +++ +  ++    +  + +E+
Sbjct: 599 KGMRATPKAYNPVIQSLFRRNNTRDAMNLFREM 631



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 228/456 (50%), Gaps = 1/456 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H++  A L LE M S G  PD    T L+    +   +K A++V   M+  G  P   
Sbjct: 197 RAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKV 256

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N  CK G V  A+  +++    G+  + +TYN+ V GLC  G++  +L+ +D +
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+G  P+ FTY+ ++    K   +  A  +L+ ++ +G  P++ ++N L+  LC   R 
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+   R +  KG  P+V ++NIL+ +LC  G  + A  L  EM     +P  VTYN L
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   GK   AL +L EM       S  +YN II  LC + +++   +  DQM  +  
Sbjct: 437 IDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 496

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N  T+N L   LC   ++ +A  +I  + ++        Y  ++T  C++G   +A  
Sbjct: 497 SRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 556

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  MT  GF  D  TY +LI GLC  G  + AL++   M     +     +N ++  L 
Sbjct: 557 ILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLF 616

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           +   T  ++ +F+ M E G+ P+  TY I+  G+  
Sbjct: 617 RRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCR 652



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 227/447 (50%), Gaps = 2/447 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   +++ ++ G +PD +     +  LC+   +  A+KVM++MV  G  PD  +Y 
Sbjct: 270 RVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYN 329

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VNCLCK G +  A  ++ +M + G   +  T+N+L+  LC    L ++L    ++  K
Sbjct: 330 IVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLK 389

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+ +T++ L+ A  K      A++L +++ + G  P+ V+YN L+  LC  G+  +A
Sbjct: 390 GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKA 449

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   +++ S G   + V+YN ++  LC + R EEA E+  +MD    S   +T+N LI  
Sbjct: 450 LDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 509

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + D A +++ +M+    +P+  +YN I+   C +G +      L  M     + +
Sbjct: 510 LCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVD 569

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC  G+ Q A  +++ +  K   +  + Y  VI SL R+  T  A  L  
Sbjct: 570 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFR 629

Query: 437 EMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           EMT+ G  PD++TY  + RGLC   G I EA +  + M +  + P+  +F  L  GL   
Sbjct: 630 EMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNL 689

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTI 522
              D  +   +++IEK  + +     I
Sbjct: 690 GMDDYFIRAIEIIIEKADLGDSDVSAI 716



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 228/455 (50%), Gaps = 1/455 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G + D V   +LL  L + +KMK    V   M   GI PD  ++  L+  LC+   V  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + ++E+M   G   +  T+ +L++G    G++  +L+   R+++ G  P   T + L+  
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K   V  A+  +   IA G +P+ ++YN  + GLC+ G    A++    +  +G +P+
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V +YNI++  LC  G+ EEA  +L +M      P I T+N LI +L    + + AL +  
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
           ++      P   ++N +I  LC  G   L ++  ++M    C P+E TYN L   LC +G
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           K+ +A  +++ + +         Y  +I  LC+K +  +A ++  +M   G + ++ T++
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 504

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LI GLC +  I++A ++   M     +P+   +N++L   CK      + ++ Q M   
Sbjct: 505 TLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTAN 564

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           G   +  TY  L+ G+      +++ ++L+ ++++
Sbjct: 565 GFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 599



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 165/300 (55%), Gaps = 7/300 (2%)

Query: 77  HKLNDAFLQLERMVS-KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           ++L +A L L R V+ KG  PDV     L+  LCK    + A+++ E M SSG  PD  +
Sbjct: 374 NRLEEA-LDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVT 432

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L++ LC  G +G A+ L+++ME  G P +TVTYN+++ GLC    + ++ +  D++ 
Sbjct: 433 YNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMD 492

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            +G+  NA T++ L++   K++ +  A +L+  +I++G +PN ++YN +LT  CK+G  +
Sbjct: 493 LQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIK 552

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A    + + + GFE +VV+Y  L+  LC  GR + A +LL  M       T   YN +I
Sbjct: 553 KAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVI 612

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG-----KVDLVVKCLDQMF 370
            SL     T  A+ +  EM +    P A +Y  +   LC  G       D +++ +D+ F
Sbjct: 613 QSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGF 672



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 180/393 (45%), Gaps = 35/393 (8%)

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           +G   +TV YN L+  L     +         + ++G+ P+  T++ L++A  +   V  
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRT 203

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+ +L+++ + G  P+  ++  L+ G  +EG  + A+R    +   G  P  V+ N+L+ 
Sbjct: 204 AVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLIN 263

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  GR E+A   + +       P  +TYN  +  L  +G   HALKV+D MV+    P
Sbjct: 264 GYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP 323

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQ 401
              +YN ++  LC  G+++     L+QM  R C P+  T+N L                 
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTL----------------- 366

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                            I +LC   +  +A  L  ++T  G +PD YT++ LI  LC  G
Sbjct: 367 -----------------IVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVG 409

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
             + AL +F  M+     PD   +N L+  LC   +   +L++ + M   G   +  TY 
Sbjct: 410 DPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYN 469

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +++G+  +  +E + EV  ++ L Q +S +A+
Sbjct: 470 TIIDGLCKKMRIEEAEEVFDQMDL-QGISRNAI 501



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 36/283 (12%)

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
           P  G + + V YN LL  L    + +    + +EM      P +VT+N L+ +L    + 
Sbjct: 142 PLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQV 201

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A+ +L+EM      P   ++  ++     EG +   ++   +M    C P + T N L
Sbjct: 202 RTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVL 261

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C +G+V++A   IQ          QE                            GF
Sbjct: 262 INGYCKLGRVEDALGYIQ----------QEIAN-------------------------GF 286

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD  TY++ + GLC  G +  AL++  VM +  + PDV  +N ++  LCK+ + + +  
Sbjct: 287 EPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 346

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +   M+E+G +P+ TT+  L+  +   + LE + ++ +++ L+
Sbjct: 347 ILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLK 389



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 1/186 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +++DA   + +M+S+G +P+ +   ++L   CK   +KKA  +++ M ++G   D  
Sbjct: 512 KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVV 571

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK G    A++L+  M   G       YN +++ L    N   ++     +
Sbjct: 572 TYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREM 631

Query: 195 IQKGLVPNAFTYSFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            + G  P+AFTY  +     +  G +  A   L +++ KG  P   S+ +L  GL   G 
Sbjct: 632 TEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGM 691

Query: 254 TEEAIR 259
            +  IR
Sbjct: 692 DDYFIR 697


>gi|15223266|ref|NP_172337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75262899|sp|Q9FRS4.1|PPR22_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08610
 gi|9802579|gb|AAF99781.1|AC003981_31 F22O13.9 [Arabidopsis thaliana]
 gi|332190196|gb|AEE28317.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 234/475 (49%), Gaps = 40/475 (8%)

Query: 69  NNDTRHR---DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
           NN+  H    + KL DA   +E M      P     +NL+  L + +++ KA+ ++ +MV
Sbjct: 107 NNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMV 166

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
            SG +PD  +Y  ++  LCKKG++  A+ L+E M   G P + +TYN+++R +   GN  
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           Q+++F    +Q G  P   TY+ L+E   +  G   A+++L+D+  +G  P++V+YN L+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
              C+ G  EE     + + S G E N V+YN LL SLC    W+E  E+L  M      
Sbjct: 287 NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           PT++TYNILI  L        A+    +M++ +  P   +YN ++  +  EG VD  ++ 
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406

Query: 366 LDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           L  + +  C P   TYN                                   VI  L +K
Sbjct: 407 LGLLKNTCCPPGLITYNS----------------------------------VIDGLAKK 432

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A +L ++M   G  PD  T  SLI G C   L+EEA ++               +
Sbjct: 433 GLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTY 492

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             ++ GLCK +  ++++EV ++M+  G  P+ET YT +V+G+   +E+ + +E +
Sbjct: 493 RLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV---EEMGMGSEAV 544



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 200/429 (46%), Gaps = 34/429 (7%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  +   +++ LC  G +  A +LVE M  +    +  + ++LVRGL  +  L++++  L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++  G VP+  TY+ ++    K+  +  A+ LL+D+   G  P++++YN ++  +   
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  E+AIRF++D    G  P +++Y +L+  +C       A E+L +M      P IVTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N L+      G  +    V+  ++      +  +YN ++  LCS    D V + L+ M+ 
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342

Query: 372 RRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
               P   TYN L                                  I  LC+     +A
Sbjct: 343 TSYCPTVITYNIL----------------------------------INGLCKARLLSRA 368

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
               Y+M +    PD  TY++++  +  EG++++A+E+  +++     P +  +N+++ G
Sbjct: 369 IDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDG 428

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           L K      +LE++  M++ G  P++ T   L+ G    + +E + +VLKE   R     
Sbjct: 429 LAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIR 488

Query: 552 SAVERLVMQ 560
            +  RLV+Q
Sbjct: 489 GSTYRLVIQ 497


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 235/469 (50%), Gaps = 5/469 (1%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV---SSGIIP 131
           D + +DA  + L RM      PDV   T LL  LC  N+ ++A++++ MM      G  P
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP 194

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  SYT ++N   K+G+   A     +M D     + VTY+S++  LC    ++++++ L
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +++ G++PN  TY+ +L           A+  L  + + G +P++V+YN L+  LCK 
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR+ EA + F  +  +G EP++ +Y  LL+    +G   E + LL  M      P    +
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI + A   K D A+ V  +M +    P+  +Y  +I  LC  G VD  +   +QM  
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
               PN   Y  L   LC   K  +A  +I  + ++       F+  +I S C++G+  +
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           + +L   M + G  P+  TYS+LI G C+ G ++EA ++   M     KPD   +N L+ 
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           G C+  R D +L +F+ M+  G  PN  TY I+++G+ H      + E+
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 229/461 (49%), Gaps = 1/461 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   ++ A   L  MV  G  P+ +   ++L+  C + + K+AI  ++ M S G+ PD  
Sbjct: 243 KGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV 302

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK G    A ++ + M   G   +  TY +L++G    G L +    LD +
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ P+   ++ L+ A  K+  V  AM +   +   G  PN+V+Y  ++  LCK G  
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+ +F  +  +G  PN++ Y  L+ SLC+  +W++A EL+ EM         + +N +
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I S    G+   + K+ D MV+   +P+  +Y+ +I   C  GK+D   K L  MF    
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+  TYN L    C V ++ +A A+ + + +   S     Y  ++  L    +T  A +
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   +TK G   +  TY+ ++ GLC   L +EAL +F  +   D + +   FN ++  L 
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           K  R D + ++F      G +PN  TY ++ E I  Q  LE
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 225/474 (47%), Gaps = 5/474 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDA 133
           R  +L+  F  L  +V KG + + +  T LL  LC   +   A+  V+  M     +PD 
Sbjct: 99  RAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDV 158

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMED---YGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            S T L+  LC +     A++L+  M D    G   + V+Y +++ G    G+ +++   
Sbjct: 159 FSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYST 218

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ + + P+  TYS ++ A  K + +  AM++L  ++  G  PN ++YN +L G C 
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCS 278

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + +EAI F + + S G EP+VV+YN L+  LC  GR  EA ++   M      P I T
Sbjct: 279 SEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIAT 338

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+   A  G       +LD MV+    P    +N +I     + KVD  +    +M 
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                PN  TY   + +LC  G V +A    + + ++  +     Y  +I SLC   K  
Sbjct: 399 QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWD 458

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A +L+ EM   G   ++  ++S+I   C EG + E+ ++F +M     KP+V  ++ L+
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G C + + D + ++   M   G  P+  TY  L+ G      ++ +  + KE+
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 184/381 (48%), Gaps = 1/381 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K+++A L   +M   G  P+VV    ++  LCK+  +  A+   E M+  G+ P+  
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++ LC       A +L+ +M D G   NT+ +NS++   C  G + +S +  D +
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ PN  TYS L++       +  A KLL  + + G KP+ V+YN L+ G C+  R 
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F+++ S G  PN+++YNI+L+ L    R   A EL   +        + TYNI+
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNII 622

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  +  TD AL++   +     +    ++N +I  L   G+ D              
Sbjct: 623 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGL 682

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TY  +A  + G G ++E   +  S+ +   +       +++  L ++G+  +A  
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 742

Query: 434 LLYEMTKYGFTPDSYTYSSLI 454
            L  + +  F+ ++ T S  I
Sbjct: 743 YLSMIDEKHFSLEASTASLFI 763



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 185/392 (47%), Gaps = 6/392 (1%)

Query: 163 GYPTNTV-TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           G  T TV TY  L+   C  G L+     L  +++KG    A T++ LL+    ++    
Sbjct: 81  GKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 222 AMKL-LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR---DLPSKGFEPNVVSYN 277
           AM + L  +      P++ S  +LL GLC E R++EA+       D    G  P+VVSY 
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            ++     EG  ++A     EM     SP +VTY+ +I +L      D A++VL  MVK 
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN 260

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA 396
              P+  +YN I+   CS  +    +  L +M     +P+  TYN L   LC  G+  EA
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             I  S+  +        Y  ++     KG   +   LL  M + G  PD + ++ LI  
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
              +  ++EA+ +F  M ++   P+V  + A++  LCKS   D ++  F+ MI++G  PN
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPN 440

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
              YT L+  +   D+ + + E++ E+  R +
Sbjct: 441 IIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 116/510 (22%), Positives = 219/510 (42%), Gaps = 52/510 (10%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG---IIPDASSYT 137
           DA    + ++ +G    +      L D+ + +    A+     M  +G   + P   +Y 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-LDRLIQ 196
            L+ C C+ G +      +  +   G+    +T+  L++GLC     + ++   L R+ +
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLD---DIIAKGGKPNLVSYNVLLTGLCKEGR 253
              +P+ F+ + LL+    E     A++LL    D    G  P++VSY  ++ G  KEG 
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-------------- 299
           +++A   + ++  +   P+VV+Y+ ++ +LC     ++A E+L  M              
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 300 -----------------------DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
                                  DG +  P +VTYN L+  L  +G++  A K+ D M K
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVE--PDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG---KV 393
               P  A+Y  ++    ++G +  +   LD M      P+   +N   ++C      KV
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN--ILICAYAKQEKV 387

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            EA  +   +     +     Y  VI  LC+ G    A     +M   G TP+   Y+SL
Sbjct: 388 DEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I  LC+    ++A E+ + M +     +   FN+++   CK  R   S ++F +M+  G 
Sbjct: 448 IHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGV 507

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            PN  TY+ L++G     +++ + ++L  +
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSM 537



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 41/323 (12%)

Query: 231 AKGGK--PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           A  GK  P + +Y +L+   C+ GR +       ++  KGF    +++  LL+ LC + R
Sbjct: 78  AGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKR 137

Query: 289 WEEANEL-LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR---FRPSAA 344
             +A ++ L  M      P + +  IL+  L    ++  AL++L  M   R     P   
Sbjct: 138 TSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVV 197

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLG 404
           SY  +I     EG  D       +M  RR  P+  TY+                      
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS--------------------- 236

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                        +I +LC+     +A ++L  M K G  P+  TY+S++ G C     +
Sbjct: 237 -------------IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+     M     +PDV  +N+L+  LCK+ R+  + ++F  M ++G  P+  TY  L+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 525 EGIAHQDELELSAEVLKELQLRQ 547
           +G A +  L +    L +L +R 
Sbjct: 344 QGYATKGAL-VEMHALLDLMVRN 365



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 46/316 (14%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL-----LAEMDGGDRSPTIV 309
           E+A   F +L  +G   ++   N   R+L    R   A  +     +A    G  +PT+ 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLN---RALADVARHSPAAAVSRYNRMARAGAGKVTPTVH 88

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQ 368
           TY ILIG     G+ D     L  +VK  FR  A ++ P++  LC++ +  D +   L +
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           M    C P+          C +                           ++  LC + ++
Sbjct: 149 MTELSCMPD-------VFSCTI---------------------------LLKGLCDENRS 174

Query: 429 YQAFQLLYEMTK---YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            +A +LL+ M      G  PD  +Y+++I G   EG  ++A   +  M +    PDV  +
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTY 234

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           ++++  LCK +  D ++EV   M++ G MPN  TY  ++ G    ++ + +   LK+++ 
Sbjct: 235 SSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRS 294

Query: 546 RQVVSESAVERLVMQY 561
             V  +      +M Y
Sbjct: 295 DGVEPDVVTYNSLMDY 310


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 235/469 (50%), Gaps = 5/469 (1%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV---SSGIIP 131
           D + +DA  + L RM      PDV   T LL  LC  N+ ++A++++ MM      G  P
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP 194

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  SYT ++N   K+G+   A     +M D     + VTY+S++  LC    ++++++ L
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +++ G++PN  TY+ +L           A+  L  + + G +P++V+YN L+  LCK 
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR+ EA + F  +  +G EP++ +Y  LL+    +G   E + LL  M      P    +
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI + A   K D A+ V  +M +    P+  +Y  +I  LC  G VD  +   +QM  
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
               PN   Y  L   LC   K  +A  +I  + ++       F+  +I S C++G+  +
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           + +L   M + G  P+  TYS+LI G C+ G ++EA ++   M     KPD   +N L+ 
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           G C+  R D +L +F+ M+  G  PN  TY I+++G+ H      + E+
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 233/488 (47%), Gaps = 38/488 (7%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + A+     M+ +   PDVV  ++++  LCK   M KA++V+  MV +G++P+  +Y  +
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  C       A+  ++KM   G   + VTYNSL+  LC  G   ++ +  D + ++GL
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------------------------- 234
            P+  TY  LL+  Y  +G    M  L D++ + G                         
Sbjct: 333 EPDIATYCTLLQ-GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 235 -----------KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                       PN+V+Y  ++  LCK G  ++A+ +F  +  +G  PN++ Y  L+ SL
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C+  +W++A EL+ EM         + +N +I S    G+   + K+ D MV+   +P+ 
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
            +Y+ +I   C  GK+D   K L  MF    KP+  TYN L    C V ++ +A A+ + 
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + +   S     Y  ++  L    +T  A +L   +TK G   +  TY+ ++ GLC   L
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            +EAL +F  +   D + +   FN ++  L K  R D + ++F  +   G +P+  TY++
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 691

Query: 523 LVEGIAHQ 530
           + E +  Q
Sbjct: 692 MAENLIEQ 699



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 235/520 (45%), Gaps = 36/520 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   ++ A   L  MV  G  P+ +   ++L+  C + + K+AI  ++ M S G+ PD  
Sbjct: 243 KGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV 302

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK G    A ++ + M   G   +  TY +L++G    G L +    LD +
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ P+   ++ L+ A  K+  V  AM +   +   G  PN+V+Y  ++  LCK G  
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+ +F  +  +G  PN++ Y  L+ SLC+  +W++A EL+ EM         + +N +
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I S    G+   + K+ D MV+   +P+  +Y+ +I   C  GK+D   K L  MF    
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFA-------------------IIQSL-GNKQNSSPQE 413
           KP+  TYN L    C V ++ +A A                   I+Q L   ++ ++ +E
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602

Query: 414 FY---------------KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            Y                 ++  LC+   T +A ++   +       ++ T++ +I  L 
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G  +EA ++F  +      PDV  ++ +   L +    +   ++F  M E G   N  
Sbjct: 663 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 722

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
               +V  +  + ++  +   L  +  +    E++   L+
Sbjct: 723 MLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 219/510 (42%), Gaps = 52/510 (10%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG---IIPDASSYT 137
           DA    E ++ +G    +      L D+ + +    A+     M  +G   + P   +Y 
Sbjct: 33  DARHVFEELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-LDRLIQ 196
            L+ C C+ G +      +  +   G+    +T+  L++GLC     + ++   L R+ +
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLD---DIIAKGGKPNLVSYNVLLTGLCKEGR 253
              +P+ F+ + LL+    E     A++LL    D    G  P++VSY  ++ G  KEG 
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-------------- 299
           +++A   + ++  +   P+VV+Y+ ++ +LC     ++A E+L  M              
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 300 -----------------------DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
                                  DG +  P +VTYN L+  L  +G++  A K+ D M K
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVE--PDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG---KV 393
               P  A+Y  ++    ++G +  +   LD M      P+   +N   ++C      KV
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFN--ILICAYAKQEKV 387

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            EA  +   +     +     Y  VI  LC+ G    A     +M   G TP+   Y+SL
Sbjct: 388 DEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I  LC+    ++A E+ + M +     +   FN+++   CK  R   S ++F +M+  G 
Sbjct: 448 IHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGV 507

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            PN  TY+ L++G     +++ + ++L  +
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSM 537



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 41/323 (12%)

Query: 231 AKGGK--PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           A  GK  P + +Y +L+   C+ GR +       ++  KGF    +++  LL+ LC + R
Sbjct: 78  AGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKR 137

Query: 289 WEEANEL-LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR---FRPSAA 344
             +A ++ L  M      P + +  IL+  L    ++  AL++L  M   R     P   
Sbjct: 138 TSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVV 197

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLG 404
           SY  +I     EG  D       +M  RR  P+  TY+                      
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS--------------------- 236

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                        +I +LC+     +A ++L  M K G  P+  TY+S++ G C     +
Sbjct: 237 -------------IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+     M     +PDV  +N+L+  LCK+ R+  + ++F  M ++G  P+  TY  L+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 525 EGIAHQDELELSAEVLKELQLRQ 547
           +G A +  L +    L +L +R 
Sbjct: 344 QGYATKGAL-VEMHALLDLMVRN 365



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 46/316 (14%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL-----LAEMDGGDRSPTIV 309
           E+A   F +L  +G   ++   N   R+L    R   A  +     +A    G  +PT+ 
Sbjct: 32  EDARHVFEELLRRGRGASIYGLN---RALADVARHSPAAAVSRYNRMARAGAGKVTPTVH 88

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQ 368
           TY ILIG     G+ D     L  +VK  FR  A ++ P++  LC++ +  D +   L +
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           M    C P+          C +                           ++  LC + ++
Sbjct: 149 MTELSCMPD-------VFSCTI---------------------------LLKGLCDENRS 174

Query: 429 YQAFQLLYEMTK---YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            +A +LL+ M      G  PD  +Y+++I G   EG  ++A   +  M +    PDV  +
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTY 234

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           ++++  LCK +  D ++EV   M++ G MPN  TY  ++ G    ++ + +   LK+++ 
Sbjct: 235 SSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRS 294

Query: 546 RQVVSESAVERLVMQY 561
             V  +      +M Y
Sbjct: 295 DGVEPDVVTYNSLMDY 310


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 240/467 (51%), Gaps = 8/467 (1%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDL-------CKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           Q   +VS  ++ D+ + T+ +Y L       C+ N +  ++ V+  M   GI PDA ++ 
Sbjct: 108 QYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFN 167

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LC +G +  A++L  +M   G+  N ++Y +++ GLC  GN + ++    ++ Q 
Sbjct: 168 ALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQN 227

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  TYS ++++  K+R V+ AM+ L +++ +G  PN+ +YN ++ G C  G+  EA
Sbjct: 228 GCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEA 287

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R F+++  +   PN V++ IL+  LC EG   EA  +   M      P I TYN L+  
Sbjct: 288 TRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDG 347

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                  + A KV + M++    P A SYN +I   C   ++D     L +M+H+   P+
Sbjct: 348 YCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPD 407

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ L   LC +G+ +EA  + + + +         Y  ++   C+ G   +A +LL 
Sbjct: 408 TVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLK 467

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M +    P+   Y+ LI G+ + G +E A E+F  +     +PD+  +  ++ GL K  
Sbjct: 468 SMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEG 527

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +D + ++F+ M + G +PN  +Y ++++G     +   +  ++ E+
Sbjct: 528 LSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 574



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 234/475 (49%), Gaps = 4/475 (0%)

Query: 57  SVYTKPNRKPGNNNDTRHRDHK---LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK 113
           S  TK    P NN+     +     ++DA     RMV    +P VV+    L    K  +
Sbjct: 49  STSTKKPSLPKNNDGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQ 108

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
               + +   M    +  +  S   L+NCLC+  +V +++ ++ KM   G   + +T+N+
Sbjct: 109 YSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNA 168

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L+ GLC  G + ++++  + ++++G  PN  +Y+ ++    K      A+ +   +   G
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG 228

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            KPN+V+Y+ ++  LCK+    +A+ F  ++  +G  PNV +YN ++   C  G+  EA 
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L  EM G D  P  VT+ IL+  L   G    A  V + M +    P  ++YN ++   
Sbjct: 289 RLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGY 348

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C +  ++   K  + M  + C P   +YN L    C   ++ EA +++  + +K  +   
Sbjct: 349 CLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  ++  LC+ G+  +A  L  EM  YG  P+  TY  L+ G C  G ++EAL++   
Sbjct: 409 VTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKS 468

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           M+E   +P++ ++  L+ G+  + + +++ E+F  +   G  P+  TYT++++G+
Sbjct: 469 MKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGL 523



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 231/449 (51%), Gaps = 2/449 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M   G  PD +    L+  LC   K+K+A+++   MV  G  P+  SYT ++N LCK
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN   A+ + +KME  G   N VTY++++  LC    +N +++FL  ++++G+ PN FT
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++        ++ A +L  +++ +   PN V++ +L+ GLCKEG   EA   F  + 
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMT 330

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG EP++ +YN L+   C++    EA ++   M     +P   +YNILI       + D
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L EM      P   +Y+ ++  LC  G+    +    +M      PN  TY  L 
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILL 450

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G + EA  +++S+  K+       Y  +I  +   GK   A +L  ++   G  
Sbjct: 451 DGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTR 510

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY+ +I+GL  EGL +EA ++F  ME+  + P+  ++N ++ G  +++ +  ++ +
Sbjct: 511 PDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 570

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDEL 533
              M+ K    N +T+ +L++ +  QDE+
Sbjct: 571 IDEMVGKRFSVNLSTFQMLLD-LESQDEI 598



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 173/331 (52%), Gaps = 2/331 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  +NDA   L  MV +G  P+V    ++++  C   ++ +A ++ + MV   ++
Sbjct: 241 DSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVM 300

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++T LV+ LCK+G V  A  + E M + G   +  TYN+L+ G C+   +N++ + 
Sbjct: 301 PNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKV 360

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +I+KG  P A +Y+ L+    K R +  A  LL ++  K   P+ V+Y+ L+ GLC+
Sbjct: 361 FEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 420

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR +EA+  F+++ S G  PN+V+Y ILL   C  G  +EA +LL  M      P IV 
Sbjct: 421 LGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH 480

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ILI  +   GK + A ++  ++     RP   +Y  +I  L  EG  D       +M 
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQ 401
                PN  +YN   M+ G  + Q++   I+
Sbjct: 541 DDGFLPNSCSYN--VMIQGFLQNQDSSTAIR 569



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 190/419 (45%), Gaps = 36/419 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +   +    KK      + L  +M+ +    N  + N L+  LC L +++ S+  
Sbjct: 91  PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L ++ + G+ P+A T                                   +N L+ GLC 
Sbjct: 151 LGKMFKLGIHPDAIT-----------------------------------FNALINGLCN 175

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG+ +EA+  F ++  +G EPNV+SY  ++  LC  G    A ++  +M+     P +VT
Sbjct: 176 EGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVT 235

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ +I SL      + A++ L EMV+    P+  +YN I+   C+ G+++   +   +M 
Sbjct: 236 YSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV 295

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            R   PN  T+  L   LC  G V EA  + +++  K        Y  ++   C +    
Sbjct: 296 GRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMN 355

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A ++   M + G  P +++Y+ LI G C    ++EA  +   M      PD   ++ L+
Sbjct: 356 EAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 415

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            GLC+  R   +L +F+ M   G  PN  TY IL++G      L+ + ++LK ++ +++
Sbjct: 416 QGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 155/328 (47%), Gaps = 3/328 (0%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P++V +   L    K+ +    +     +       NV S NIL+  LC     + +  
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           +L +M      P  +T+N LI  L   GK   A+++ +EMVK    P+  SY  +I  LC
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
             G   + V    +M    CKPN  TY+ +   LC    V +A   +  +  ++   P  
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV-ERGIPPNV 268

Query: 414 F-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
           F Y  ++   C  G+  +A +L  EM      P++ T++ L+ GLC EG++ EA  +F  
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M E   +PD+  +NAL+ G C  R  + + +VF++MI KG  P   +Y IL+ G      
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 533 LELSAEVLKELQLRQVVSESAVERLVMQ 560
           ++ +  +L E+  + +  ++     +MQ
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQ 416



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 143/276 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A L  E M  KG +PD+     L+   C    M +A KV E+M+  G  P A 
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+N  CK   +  A  L+ +M       +TVTY++L++GLC LG   ++L     +
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G  PN  TY  LL+   K   +  A+KLL  +  K  +PN+V Y +L+ G+   G+ 
Sbjct: 435 CSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL 494

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A   F  L   G  P++ +Y ++++ L  EG  +EA +L  +M+     P   +YN++
Sbjct: 495 EVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVM 554

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           I     +  +  A++++DEMV  RF  + +++  ++
Sbjct: 555 IQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590


>gi|356498877|ref|XP_003518274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 395

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/378 (37%), Positives = 212/378 (56%), Gaps = 10/378 (2%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L Q +  LDR +Q    P+  T + L++AA KE GV  AMKLL ++++KG KPN+V+YNV
Sbjct: 12  LKQGVVVLDRQLQSKCYPDVVTCTELIDAACKESGVGQAMKLLIEMMSKGCKPNVVTYNV 71

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+ G+C EGR +EAIRF ++LPS   + +V+SY I+L SLC  G+W +A +LLA M    
Sbjct: 72  LIKGICNEGRLDEAIRFLKNLPSYSIQLDVISYTIILHSLCSGGKWMDAMKLLASMLRNG 131

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
            SP +VT+N LI  L   G    AL VL+ M K    P+  SYNP+I   C+E   D  +
Sbjct: 132 FSPNVVTFNTLINFLCLKGLLGKALNVLEMMPKHGCTPNFRSYNPLIEGFCNEKSADRTI 191

Query: 364 KCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           +    M  R C  +  TYN  L  LC  GKV +A  I+  L +    SP      VI  L
Sbjct: 192 EYSRIMVSRGCYLDTVTYNILLTALCKDGKVDDAIEILNQL-SLNGCSPLLITYIVIDGL 250

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
            + GKT     L  E+      P+  T++S+  GL  +G + EA++ F  +E    +   
Sbjct: 251 LKVGKTVHVVVLFEEIK--ALKPNLITFTSVEGGLSRKGKVHEAIQNFRFLEGLGIR--- 305

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
               ++++GLCK+++T  +++    M+E G  P E TY ILV+GI  +   E ++++  E
Sbjct: 306 ---XSIIMGLCKTQQTSRAIDFLAYMVENGCKPTEATYNILVKGITCEGLPEEASKLWSE 362

Query: 543 LQLRQVVSESAVERLVMQ 560
           L  + +V +S VE++  Q
Sbjct: 363 LXSKGLVKKSLVEKMKSQ 380



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 192/395 (48%), Gaps = 43/395 (10%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + KL    + L+R +     PDVV  T L+   CK + + +A+K++  M+S G  P+  +
Sbjct: 9   ESKLKQGVVVLDRQLQSKCYPDVVTCTELIDAACKESGVGQAMKLLIEMMSKGCKPNVVT 68

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L+  +C +G +  A++ ++ +  Y    + ++Y  ++  LC  G    +++ L  ++
Sbjct: 69  YNVLIKGICNEGRLDEAIRFLKNLPSYSIQLDVISYTIILHSLCSGGKWMDAMKLLASML 128

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PN  T++ L+     +  +  A+ +L+ +   G  PN  SYN L+ G C E   +
Sbjct: 129 RNGFSPNVVTFNTLINFLCLKGLLGKALNVLEMMPKHGCTPNFRSYNPLIEGFCNEKSAD 188

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
             I + R + S+G   + V+YNILL +LC +G+ ++A E+L ++     SP ++TY I+I
Sbjct: 189 RTIEYSRIMVSRGCYLDTVTYNILLTALCKDGKVDDAIEILNQLSLNGCSPLLITY-IVI 247

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   GKT H + VL E +K   +P+  ++  +   L  +GKV                
Sbjct: 248 DGLLKVGKTVHVV-VLFEEIKA-LKPNLITFTSVEGGLSRKGKV---------------- 289

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            +E   N              F  ++ LG + +         +I  LC+  +T +A   L
Sbjct: 290 -HEAIQN--------------FRFLEGLGIRXS---------IIMGLCKTQQTSRAIDFL 325

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
             M + G  P   TY+ L++G+  EGL EEA +++
Sbjct: 326 AYMVENGCKPTEATYNILVKGITCEGLPEEASKLW 360



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 33/188 (17%)

Query: 76  DHKLNDAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + K  D  ++  R MVS+G   D V    LL  LCK  K+  AI+++  +  +G  P   
Sbjct: 183 NEKSADRTIEYSRIMVSRGCYLDTVTYNILLTALCKDGKVDDAIEILNQLSLNGCSPLLI 242

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS--------------------- 173
           +Y  +++ L K G   + + L E+++      N +T+ S                     
Sbjct: 243 TYI-VIDGLLKVGKTVHVVVLFEEIK--ALKPNLITFTSVEGGLSRKGKVHEAIQNFRFL 299

Query: 174 --------LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
                   ++ GLC     ++++ FL  +++ G  P   TY+ L++    E     A KL
Sbjct: 300 EGLGIRXSIIMGLCKTQQTSRAIDFLAYMVENGCKPTEATYNILVKGITCEGLPEEASKL 359

Query: 226 LDDIIAKG 233
             ++ +KG
Sbjct: 360 WSELXSKG 367


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 245/503 (48%), Gaps = 49/503 (9%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           KG + DV     L+  LCK  + +   ++M  M+  G +P  ++ + LV+ L KKGN+G 
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A  LV K++ +G   +   YN+L+  +C  G L+++    + +  KGL PN  TYS L++
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398

Query: 212 AAYK---------------ERGV--------------------HAAMKLLDDIIAKGGKP 236
           +  K               E G+                     AA  L D++IA G KP
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N+V Y  L++G CKEG    A R + ++  KG  PN  ++  L+  LC   R  EAN+L 
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM   +  P  VTYN+LI      G T  A ++LDEMV+    P   +Y P+I+ LCS 
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578

Query: 357 GKVDLVVKCLDQMFHRR--------CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           G+V    + ++ +   +        C PN  TY  L   LC +G + +A  + + +    
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN 638

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
           +   Q  Y   +  L  +G   +A Q L+++   GF  ++ TY+ LIRG C  G I+EA 
Sbjct: 639 SLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAA 697

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL--SLEVFQMMIEKGQMPNETTYTILVE 525
           E+ V M +    PD  +++ ++   C  RR DL  ++++++ M+ +G  P+   Y  L+ 
Sbjct: 698 EVLVNMIDSGISPDCISYSTIIYEYC--RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIY 755

Query: 526 GIAHQDELELSAEVLKELQLRQV 548
           G     EL  + E+  ++  R V
Sbjct: 756 GCCVTGELTKAFELRDDMMRRGV 778



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 237/494 (47%), Gaps = 17/494 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +   A    + +VS G +PDV   T ++  LC+     +A +V+  M SSG     +
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y   +  LCK   V  A+++   +   G   +  TY +LV GLC +       + ++ +
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ G VP+    S L++   K+  + +A  L++ +   G  P+L  YN L+  +CK+G+ 
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F ++  KG  PN V+Y+IL+ S C  G+ + A   L +M       T+  Y+ L
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK   A  + DEM+    +P+   Y  +I+  C EG++    +   +M  +  
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            PN  T+  L + LC   ++ EA  +   +  + N  P E  Y  +I   C++G T +AF
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEM-VEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK--------PDVDN 484
           +LL EM + G  PD+YTY  LI GLC  G + EA E    ++    K        P+V  
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVT 610

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + AL+ GLCK    D +  + + M+    +PN+ TY   ++ +  +  +E      K +Q
Sbjct: 611 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE------KAIQ 664

Query: 545 LRQVVSESAVERLV 558
           L  V+ E  +   V
Sbjct: 665 LHDVLLEGFLANTV 678



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 220/480 (45%), Gaps = 16/480 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   +  AF  + ++   G  P +     L+  +CK  K+ +A  +   M   G+ 
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++  CK+G +  A+  + KM + G       Y+SL+ G C LG L  +   
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I  GL PN   Y+ L+    KE  +H A +L  ++  KG  PN  ++  L++GLC 
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R  EA + F ++      PN V+YN+L+   C EG    A ELL EM      P   T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567

Query: 311 YNILIGSLAYHGKTDHALKVLDEM---------VKGRFRPSAASYNPIIARLCSEGKVDL 361
           Y  LI  L   G+   A + ++++         ++G   P+  +Y  +I  LC  G +D 
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCL-PNVVTYTALINGLCKIGLMDK 626

Query: 362 VVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSL--GNKQNSSPQEFYKYV 418
                 +M      PN+ TY   L  L   G +++A  +   L  G   N+     Y  +
Sbjct: 627 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVT---YNIL 683

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I   C+ G+  +A ++L  M   G +PD  +YS++I   C  G ++EA++++  M     
Sbjct: 684 IRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV 743

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PD   +N L+ G C +     + E+   M+ +G  PN  TY  L+ G      +  +A+
Sbjct: 744 NPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 803



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 204/409 (49%), Gaps = 10/409 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  KL+ A   L +M   G K  V   ++L+   CK  K++ A  + + M+++G+ 
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   YT L++  CK+G +  A +L  +M   G   NT T+ +L+ GLC    + ++ + 
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +++  ++PN  TY+ L+E   KE     A +LLD+++ KG  P+  +Y  L++GLC 
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 251 EGRTEEAIRFFRDLPSK--------GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            GR  EA  F  DL  +        G  PNVV+Y  L+  LC  G  ++A  L  EM   
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLAS 637

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           +  P   TY   +  L   G  + A+++ D +++G F  +  +YN +I   C  G++   
Sbjct: 638 NSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEG-FLANTVTYNILIRGFCKLGRIQEA 696

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            + L  M      P+  +Y+ +    C  G ++EA  + +S+ N+  +     Y ++I  
Sbjct: 697 AEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYG 756

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
            C  G+  +AF+L  +M + G  P+  TY+SLI G C+   +    + F
Sbjct: 757 CCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 169/357 (47%), Gaps = 1/357 (0%)

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++  G++P   T S +L    + R    A+ L D+I++ G +P++  Y  ++  LC+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              A      + S G + +V +YN+ +R LC   R  EA E+   +        + TY  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L    + +   ++++EM++  F PS A+ + ++  L  +G +      ++++    
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P+   YN L   +C  GK+ EA ++  ++G+K        Y  +I S C++GK   A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             L +MT+ G     Y YSSLI G C  G +  A  +F  M     KP+V  + +L+ G 
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           CK      +  ++  M  KG  PN  T+T L+ G+ H + +  + ++  E+    V+
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 238/451 (52%), Gaps = 6/451 (1%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           ++++N+A   LE M   G +PDV    ++++ LCKA ++ +A K+ + M+      DA  
Sbjct: 248 NNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALI 307

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR-L 194
             YL++ LC+ G V  A  ++ K+ +     NTV YN+L+ G  + G   ++   L + +
Sbjct: 308 QGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNM 363

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  P+AFT++ +++   K+  + +A++ LD+++ KG +PN+++Y +L+ G CK+G  
Sbjct: 364 VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA +    + +KG   N V YN L+ +LC +G+ ++A ++  EM      P I T+N L
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L  + K + AL +  +M+      +  +YN +I        +    K + +M  R C
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC 543

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TYNGL   LC  G  ++   +I+ +  ++          +I S CR GK   A Q
Sbjct: 544 PLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQ 603

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L +M + G TPD  TY+SLI GLC  G  +EAL +F  ++     PD   +N L+   C
Sbjct: 604 FLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
                + + ++    +  G +PNE T++IL+
Sbjct: 664 YEGLFNDACQLLFKGVSNGFIPNEITWSILI 694



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 234/481 (48%), Gaps = 7/481 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+S+G  P V     ++   C  N++  A  ++  M   G +P++  Y  L++ L +   
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  AM+L+E+M   G   +  T+N ++ GLC  G ++++ +  DR++ +    +A    +
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF-FRDLPSK 267
           L+    +   V  A  +L  I      PN V YN L+ G    GR EEA    ++++   
Sbjct: 311 LMHGLCRMGKVDEARAMLSKI----PNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GFEP+  ++NI++  LC +G    A E L EM      P ++TY ILI      G  + A
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            KV++ M       +   YN +I  LC +GK+   ++   +M  + CKP+  T+N L   
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC   K++EA  + + +  +   +    Y  +I +  R     QA +L+ EM   G   D
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           + TY+ LI+ LC  G  E+ L +   M   +  P +++ N L+   C++ + + +L+  +
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV-ERLVMQYDFEG 565
            MI++G  P+  TY  L+ G+      + +  +   LQ + +  ++     L+ +Y +EG
Sbjct: 607 DMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG 666

Query: 566 I 566
           +
Sbjct: 667 L 667



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 224/510 (43%), Gaps = 66/510 (12%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDL----CKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           F+ + R   K   P   QAT LL D+    C     K    V+E++V+            
Sbjct: 132 FILIMRYYGKAGLPG--QATRLLLDMWGVYCFEPTFKSYNVVLEILVAG----------- 178

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
             NC     NV Y       M   G      T+  +++  CM+  ++ +   L  + + G
Sbjct: 179 --NCPKVAPNVFY------DMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHG 230

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
            VPN+  Y  L+ A  +   V+ AMKLL+++   G +P++ ++N ++ GLCK GR  EA 
Sbjct: 231 CVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAA 290

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +    +  + F  + +    L+  LC  G+ +EA  +L+++     +P  V YN LI   
Sbjct: 291 KLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGY 346

Query: 319 AYHGKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              G+ + A  +L   MV   F P A ++N +I  LC +G +   ++ LD+M  +  +PN
Sbjct: 347 VVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPN 406

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L    C  G  +EA  ++ S+  K  S     Y  +I +LC+ GK   A Q+  
Sbjct: 407 VITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYG 466

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-------VVMEEYDYKPDVDNF---- 485
           EM+  G  PD YT++SLI GLC    +EEAL ++       V+     Y   +  F    
Sbjct: 467 EMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLE 526

Query: 486 ------------------------NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
                                   N L+  LCK+  T+  L + + M  +   P+  +  
Sbjct: 527 LIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCN 586

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           IL+       ++  + + L+++  R +  +
Sbjct: 587 ILINSFCRTGKVNDALQFLRDMIQRGLTPD 616



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 141/257 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+ DA      M SKG KPD+    +L+Y LCK +KM++A+ +   M+  G+I +  
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++   +   +  A +LV +M   G P + +TYN L++ LC  G   + L  ++++
Sbjct: 514 TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM 573

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + + P+  + + L+ +  +   V+ A++ L D+I +G  P++V+YN L+ GLCK GR 
Sbjct: 574 FGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRF 633

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+  F  L +KG  P+ V+YN L+   C EG + +A +LL +       P  +T++IL
Sbjct: 634 QEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSIL 693

Query: 315 IGSLAYHGKTDHALKVL 331
           I     +        +L
Sbjct: 694 INYFVKNNSDSEQFTIL 710



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 194/443 (43%), Gaps = 39/443 (8%)

Query: 148 NVGYAMQLVEKME-DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           +V  +M L EK     GY  +   Y  L+  L  +G      + L ++  +G V     +
Sbjct: 73  DVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLF 132

Query: 207 SFLLEAAYKERGV--HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
             L+   Y + G+   A   LLD       +P   SYNV+L  L      + A   F D+
Sbjct: 133 -ILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDM 191

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            S+G  P V ++ +++++ CM    + A  LL +M      P  + Y +LI +L+ + + 
Sbjct: 192 LSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRV 251

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + A+K+L+EM      P   ++N +I  LC  G++    K  D+M  R     +    G 
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTA-DALIQGY 310

Query: 385 AM--LCGVGKVQEAFAIIQSLGNKQNS-------------------------------SP 411
            M  LC +GKV EA A++  + N                                    P
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370

Query: 412 QEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
             F +  +I  LC+KG    A + L EM K GF P+  TY+ LI G C +G  EEA ++ 
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M       +   +N L+  LCK  +   +L+++  M  KG  P+  T+  L+ G+   
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKN 490

Query: 531 DELELSAEVLKELQLRQVVSESA 553
           D++E +  + +++ L  V++ + 
Sbjct: 491 DKMEEALGLYRDMLLEGVIANTV 513



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/221 (19%), Positives = 93/221 (42%), Gaps = 10/221 (4%)

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT------YNGLAMLCGVGKVQEAFAI 399
           Y  +I +L + G+  ++ K L QM    C   E        Y G A L G    Q    +
Sbjct: 97  YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPG----QATRLL 152

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           +   G        + Y  V+  L        A  + Y+M   G +P  YT+  +++  CM
Sbjct: 153 LDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCM 212

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
              ++ A  +   M ++   P+   +  L+  L ++ R + ++++ + M   G  P+  T
Sbjct: 213 VNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQT 272

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +  ++ G+     +  +A++   + LR   +++ ++  +M 
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMH 313


>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 143/441 (32%), Positives = 221/441 (50%), Gaps = 34/441 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL +A   ++ M  +   P      NL+  L K    ++A +V+++MV SG IPD  +Y 
Sbjct: 145 KLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITYN 204

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV  LCKKG +  A++L+++M   G P + +TYN+++R +   G  +Q++ F    ++K
Sbjct: 205 MLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRK 264

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G      TY+ L+E   K  G   AM++L+D+  +G  P++V+YN L+   CK+G+ E+ 
Sbjct: 265 GCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDT 324

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                +L S G  PN V+YN LL SLC  G W+E +E+L  M+   + PT+VTYNILI  
Sbjct: 325 ALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILING 384

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +G  D A+   D+MV     P   +YN ++A LC EG VD  +  L  +   RC P 
Sbjct: 385 LCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPG 444

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN                                   VI  L +KG   +A +L  E
Sbjct: 445 LITYN----------------------------------IVIDGLAKKGCMEKAMELYGE 470

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + GF PD  T+ +L  GL    L+E+AL I   M + + +     F  ++ GLC +  
Sbjct: 471 MIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGM 530

Query: 498 TDLSLEVFQMMIEKGQMPNET 518
            + + ++ Q + E      ET
Sbjct: 531 IEEANQLHQKLTELKVFREET 551



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 208/451 (46%), Gaps = 34/451 (7%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +L +LC   K+  A +++++M     IP   S   L+  L K  +   A ++++ M   G
Sbjct: 136 ILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSG 195

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              + +TYN LV GLC  G L  +++ LD +   G  P+A TY+ +L   +   G   A+
Sbjct: 196 GIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAI 255

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
               D + KG    L++Y VL+  +CK   T +A+    D+  +G  P++V+YN L+   
Sbjct: 256 GFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYT 315

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C +G++E+   ++  +      P  VTYN L+ SL  HG  D   ++L  M      P+ 
Sbjct: 316 CKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTV 375

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
            +YN +I  LC  G +D  +   DQM    C P+  TYN L                   
Sbjct: 376 VTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTL------------------- 416

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                          + +LC++G   +A  LL+ +     +P   TY+ +I GL  +G +
Sbjct: 417 ---------------LAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCM 461

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           E+A+E++  M E  + PD      L  GL +    + +L + + M ++ Q    + +  +
Sbjct: 462 EKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFV 521

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           + G+     +E + ++ ++L   +V  E  +
Sbjct: 522 IHGLCAAGMIEEANQLHQKLTELKVFREETM 552



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 189/392 (48%), Gaps = 1/392 (0%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T N +++ LC  G L  + + +D + ++  +P   +   L+    K      A ++L  +
Sbjct: 132 TNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIM 191

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +  GG P++++YN+L+ GLCK+G  + AI    ++   G  P+ ++YN +LR +   G +
Sbjct: 192 VMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGF 251

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           ++A     +         ++TY +LI  +  H  T  A++VL++M      P   +YN +
Sbjct: 252 DQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSL 311

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           +   C +GK +     +  +      PN  TYN L   LC  G   E   I+  +     
Sbjct: 312 VNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQ 371

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  +I  LC+ G   +A     +M  +   PD  TY++L+  LC EG+++EAL 
Sbjct: 372 PPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALH 431

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   + +    P +  +N ++ GL K    + ++E++  MIE+G  P++ T+  L  G+ 
Sbjct: 432 LLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLF 491

Query: 529 HQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
             D +E +  +LKE+  R    +++  R V+ 
Sbjct: 492 RLDLVEDALVILKEMNKRNQRIKNSAFRFVIH 523



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 1/136 (0%)

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           +E    ++ +LC KGK   A +L+  M +    P   +  +LIRGL      E A  +  
Sbjct: 130 EETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLK 189

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           +M      PD+  +N L+ GLCK      ++E+   M   G  P+  TY  ++  +    
Sbjct: 190 IMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHG 249

Query: 532 ELELSAEVLKELQLRQ 547
             + +    K+ QLR+
Sbjct: 250 GFDQAIGFWKD-QLRK 264


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 234/456 (51%), Gaps = 4/456 (0%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPD 132
           D + +DA  + L RM   G  P+V     LL  LC  N+ ++A+++++MM   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             SYT ++N   K+G++  A     +M D G   N VTY+S++  LC    ++++++ L 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +++ G++PN  TY+ ++           A+  L  + + G +P++V+YN L+  LCK G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R  EA + F  +  +G +P + +Y  LL+    +G   E + LL  M      P    ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ILI + A  GK D A+ V  +M +    P   +Y  +I  LC  G+V+  ++  +QM   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           R  P    YN L   LC   K  +A  +I  + ++       F+  +I S C++G+  ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   M + G  PD  TYS+LI G C+ G ++EA ++   M     KPD   +N L+ G
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            CK  R + +L +F+ M   G  P+  TY I+++G+
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 246/491 (50%), Gaps = 4/491 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSY 136
           +L+  F  L  ++ KG + D +  T LL  LC   +   A+  V+  M   G IP+  SY
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             L+  LC +     A++L++ M D G   P + V+Y +++ G    G+L+++      +
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G++PN  TYS ++ A  K + +  AM++L  ++  G  PN  +YN ++ G C  G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI F + + S G EP+VV+YN L+  LC  GR  EA ++   M      P I TY  L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   A  G       +LD MV+    P+   ++ +I     +GKVD  +    +M  +  
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY   + +LC  G+V++A    + + +++ S     Y  +I SLC   K  +A +
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+ EM   G   D+  ++S+I   C EG + E+ ++F +M     KPD+  ++ L+ G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            + + D + ++   M+  G  P+  TY  L+ G      +E +  + +E++   V  +  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 554 VERLVMQYDFE 564
              +++Q  F+
Sbjct: 586 TYNIILQGLFQ 596



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 225/471 (47%), Gaps = 39/471 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A+     M+ +G  P+VV  ++++  LCKA  M KA++V+  MV +G++P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V+  C  G    A+  ++KM   G   + VTYNSL+  LC  G   ++ +  D +
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMK-LLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            ++GL P   TY  LL+  Y  +G    M  LLD ++  G  PN   +++L+    K+G+
Sbjct: 331 TKRGLKPEITTYGTLLQ-GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +  +G  P+ V+Y  ++  LC  GR E+A     +M     SP  + YN 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI SL    K D A +++ EM+          +N II   C EG+V    K  D M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            KP+  TY+ L                                  I   C  GK  +A +
Sbjct: 510 VKPDIITYSTL----------------------------------IDGYCLAGKMDEATK 535

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M   G  PD  TY++LI G C    +E+AL +F  ME     PD+  +N +L GL 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++RRT  + E++  + E G     +TY I++ G+   +   L+ E L+  Q
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN---LTDEALRMFQ 643



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 4/386 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL- 225
           N  TY  L+   C  G L+     L  +I+KG   +A  ++ LL+    ++    AM + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE--PNVVSYNILLRSL 283
           L  +   G  PN+ SYN+LL GLC E R++EA+   + +P  G +  P+VVSY  ++   
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             EG  ++A     EM      P +VTY+ +I +L      D A++VL  MVK    P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +YN I+   CS G+    +  L +M     +P+  TYN L   LC  G+  EA  +  S
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  +        Y  ++     KG   +   LL  M + G  P+ Y +S LI     +G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++A+ +F  M +    PD   +  ++  LCKS R + ++  F+ MI++   P    Y  
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 523 LVEGIAHQDELELSAEVLKELQLRQV 548
           L+  +   D+ + + E++ E+  R +
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 137/271 (50%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G   D +   +++   CK  ++ ++ K+ ++MV  G+ PD  +Y+ L++  C  G 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A +L+  M   G   + VTYN+L+ G C +  +  +L     +   G+ P+  TY+ 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L+  ++ R   AA +L   I   G +  L +YN++L GLCK   T+EA+R F++L    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +    ++NI++ +L   GR +EA +L A +      P + TY+++  +L   G  +   
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            +   M +     ++   N I+ +L   G +
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 149/310 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ DA    E+M+ +   P  +   +L++ LC  +K  KA +++  M+  GI  D  
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  +++  CK+G V  + +L + M   G   + +TY++L+ G C+ G ++++ + L  +
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ P+  TY+ L+    K   +  A+ L  ++ + G  P++++YN++L GL +  RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   +  +   G +  + +YNI+L  LC     +EA  +   +   D      T+NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG+L   G+ D A  +   +      P   +Y+ +   L  +G ++ +      M    C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 375 KPNEGTYNGL 384
             N    N +
Sbjct: 721 TANSRMLNSI 730



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 41/320 (12%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL--LAEMDGGDRSPTIVTYN 312
           E+A   F +L  +G   ++   N  L  +         +    +A     + +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQMFH 371
           ILIGS    G+ D     L  ++K  FR  A ++ P++  LC++ +  D +   L +M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY------------- 417
             C PN  +YN L   LC   + QEA  ++Q + +     P +   Y             
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 418 ------------------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
                                   +I +LC+     +A ++L  M K G  P+  TY+S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + G C  G  +EA+     M     +PDV  +N+L+  LCK+ R   + ++F  M ++G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 514 MPNETTYTILVEGIAHQDEL 533
            P  TTY  L++G A +  L
Sbjct: 336 KPEITTYGTLLQGYATKGAL 355


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 236/491 (48%), Gaps = 2/491 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++A     RM+ K   P  V    LL  + K       + +   M S GI PD  +   
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LC    V +A   + K+   G+  +  T+ +L+RGLC+ G + ++L   D++I +G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K+R V  A  +  ++I KG  PN+V+YN L+ GLCK    +   
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
               ++      P+V + N ++ +LC EG   EA++++  M      P +VTYN L+   
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + D A+KV D MV      +  SYN +I   C    VD  +   ++M  +   PN 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L   LC VG++Q+A ++   +  +        Y+ +   LC+     +A  LL  
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +    + PD   Y++++ G+C  G +E+A ++F  +     +P+V  +N ++ GLCK   
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV-VSESAVER 556
              + ++F  M + G  PN+ TY ++  G    +E   + E+L+E+  R   V  S    
Sbjct: 446 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 505

Query: 557 LVMQYDFEGIE 567
           LV     +G++
Sbjct: 506 LVGMLSDDGLD 516



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 213/434 (49%), Gaps = 1/434 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N + +A+     M+     P    +  L+  + K  +    + L  +M+ +G P +  T 
Sbjct: 24  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
             ++  LC L  ++ +   L ++++ G  P+A T++ L+     E  +  A+ L D +I 
Sbjct: 84  AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G +PN+V+Y  L+ GLCK+ +  EA   F ++ +KG  PN+V+YN L+  LC    W+ 
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 203

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
              L+ EM      P + T N ++ +L   G    A  V+D M+     P+  +YN ++ 
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
             C   +VD+ VK  D M H+ C  N  +YN L    C +  V +A  + + +  ++ + 
Sbjct: 264 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 323

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I  LC  G+   A  L +EM   G  PD  TY +L   LC    +++A+ + 
Sbjct: 324 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 383

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             +E  ++ PD+  +  +L G+C++   + + ++F  +  KG  PN  TY I++ G+  Q
Sbjct: 384 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 443

Query: 531 DELELSAEVLKELQ 544
             L  ++++  E+ 
Sbjct: 444 GLLAEASKLFSEMN 457



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 219/461 (47%), Gaps = 35/461 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ AF  L +++  GH+PD    T L+  LC   K+ +A+ + + M+  G  P+  +Y 
Sbjct: 95  RVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYG 154

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK   V  A  +  +M   G   N VTYNSL+ GLC L         ++ ++  
Sbjct: 155 TLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 214

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++P+ FT + +++A  KE  V  A  ++D +I +G +PN+V+YN L+ G C     + A
Sbjct: 215 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 274

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F  +  K    NV+SYN L+   C     ++A  L  EM   + +P  VTYN LI  
Sbjct: 275 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 334

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L + G+   A+ +  EMV     P   +Y  +   LC    +D                 
Sbjct: 335 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD----------------- 377

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                            +A A+++++         + Y  ++  +CR G+   A  L   
Sbjct: 378 -----------------KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 420

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           ++  G  P+ +TY+ +I GLC +GL+ EA ++F  M +    P+   +N +  G  ++  
Sbjct: 421 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 480

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
              ++E+ + M+ +G   + +T T+LV G+   D L+ S +
Sbjct: 481 ALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDGLDQSVK 520



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 216/515 (41%), Gaps = 80/515 (15%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D ++ +AF     M++KG  P++V   +L++ LCK  + K    +M  MV S I+PD  
Sbjct: 162 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 221

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   +V+ LCK+G V  A  +V+ M   G   N VTYN+L+ G C+   ++ +++  D +
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + K  V N  +Y+ L+    K + V  AM L +++  +   PN V+YN L+ GLC  GR 
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++AI  F ++ ++G  P++V+Y  L   LC     ++A  LL  ++G +  P I  Y  +
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTI 401

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  +   G+ + A  +   +     +P+  +YN +I  LC +G +    K   +M    C
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 461

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            PN+ TYN                                   +     R  +  +  +L
Sbjct: 462 SPNDCTYN----------------------------------LITRGFLRNNEALRTIEL 487

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGL-------------------------------- 462
           L EM   GF+ D  T + L+  L  +GL                                
Sbjct: 488 LEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSS 547

Query: 463 --------------IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
                         +++AL  F  M      P   +F  LL  + K +     L +   M
Sbjct: 548 SHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM 607

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              G  P+  T  IL+    H   L  +  VL +L
Sbjct: 608 DSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL 642



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 230/532 (43%), Gaps = 62/532 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA      MV++G  PD+V    L   LCK   + KA+ +++ +  S   PD   YT
Sbjct: 340 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYT 399

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ +C+ G +  A  L   +   G   N  TYN ++ GLC  G L ++ +    + + 
Sbjct: 400 TILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 459

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG---------- 247
           G  PN  TY+ +     +       ++LL++++A+G   + VS   LL G          
Sbjct: 460 GCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGMLSDDGLDQS 518

Query: 248 ----LCKEGRT---------------------------------EEAIRFFRDLPSKGFE 270
               LCK   +                                 ++A+  F  +      
Sbjct: 519 VKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPP 578

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P+ V +  LL S+     +     L  +MD     P + T NILI S  +  +  +A  V
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCG 389
           L +++K  F+P   +Y  ++  LC             +M  +   P+  TYN L   LC 
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCN 685

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           + + +    ++  + N +       +  V+ +LC++G    A  ++  M K G  PD  T
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y++L+ G C+   ++EA+++F  M      P+V ++N L+ G C+ +R D ++ + + M 
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            +G + +  TY  L+ G+ H   L+ +  +  E+     + +    R+++ Y
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 227/517 (43%), Gaps = 34/517 (6%)

Query: 53  SPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKAN 112
           SP D  Y    R    NN+   R  +L      LE M+++G   DV   T LL  +   +
Sbjct: 462 SPNDCTYNLITRGFLRNNEAL-RTIEL------LEEMLARGFSVDV-STTTLLVGMLSDD 513

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK------------GNVGYAMQLVEKME 160
            + +++K +    SS   P  +    L                     +  A+    +M 
Sbjct: 514 GLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRML 573

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
               P +TV +  L+  +  + + +  L    ++   G+ P+ +T + L+ +    R + 
Sbjct: 574 HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLG 633

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A  +L  ++  G +P++V+Y  L+ GLCK             + +KG  P++ +YN L+
Sbjct: 634 YAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLI 680

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
            +LC    W+    LL EM      P +V ++ ++ +L   G    A  V+D M+K    
Sbjct: 681 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 740

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
           P   +Y  ++   C   ++D  VK  D M H+ C PN  +YN L    C + ++ +A  +
Sbjct: 741 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 800

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           ++ +  +   +    Y  +I  LC  G+   A  L +EM   G  PD  TY  L+  LC 
Sbjct: 801 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 860

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
              + EA+ +   +E  +   D+  +N  + G+C++   + + ++F  +  KG  P+  T
Sbjct: 861 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 920

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           Y I++ G+  +  L+ + ++ +++    + S S   R
Sbjct: 921 YNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSR 957


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 227/468 (48%), Gaps = 1/468 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           + L+DA     RM+     P  V    LL  + K  +      +   M S GI PD  + 
Sbjct: 46  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N  C     G+A  ++ K+   G   +T T+ +L+RGLC+ G +  +L   D++I 
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 165

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G  PN  TY  L+    K    +AA++LL  +     +P++V Y  ++  LCK+ +  E
Sbjct: 166 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 225

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F  +  +G  P++ +Y  L+ SLC    W+    LL +M      P +V ++ ++ 
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 285

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +L   GK   A  V+D M+     P+  +YN ++   C + ++D  VK  D M H    P
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 345

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  +YN L    C + ++ +A  + + +  K+       Y  ++  LC  G+   A  L 
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALF 405

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           +EM  +G  PD  TY  L+  LC +  ++EA+ +   +E  +  PD+  +  ++ G+C++
Sbjct: 406 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 465

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              + + ++F  +  KG  PN  TYTI++ G+  +  L+ + ++  E+
Sbjct: 466 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 513



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 235/474 (49%), Gaps = 1/474 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M S G  PDV     L+   C  N+   A  V+  ++  G+ PD +++T L+  LC +G
Sbjct: 92  QMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEG 151

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +G A+ L +KM   G+  N VTY +L+ GLC +GN N +++ L  + Q    P+   Y+
Sbjct: 152 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 211

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            ++++  K+R V  A  L   ++ +G  P++ +Y  L+  LC     +        + + 
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              P+VV ++ ++ +LC EG+  EA++++  M      P +VTYN L+       + D A
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 331

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
           +KV D MV   + P+  SYN +I   C   ++D      ++M  +   PN  TYN L   
Sbjct: 332 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC VG++Q+A A+   +           Y+ ++  LC+K    +A  LL  +      PD
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPD 451

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
              Y+ +I G+C  G +E A +IF  +     +P+V  +  ++ GLC+    D + ++F 
Sbjct: 452 IQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 511

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            M   G  P+  TY  + +G+    E   + ++L+E+  R   ++ +   L+++
Sbjct: 512 EMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 565



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 229/474 (48%), Gaps = 43/474 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ DA    ++M+ +G +P+VV    L+  LCK      AI+++  M      PD   YT
Sbjct: 152 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 211

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A  L  KM   G   +  TY SL+  LC L         L+++I  
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++P+   +S +++A  KE  +  A  ++D +I +G +PN+V+YN L+ G C +   +EA
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 331

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F  +   G+ PNV+SYN L+   C   R ++A  L  EM   +  P  VTYN L+  
Sbjct: 332 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L + G+   A+ +  EMV     P  A+Y  ++  LC +  +D                 
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLD----------------- 434

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                            EA A+++++         + Y  VI  +CR G+   A  +   
Sbjct: 435 -----------------EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN 477

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           ++  G  P+  TY+ +I GLC  GL++EA ++F+ M+     PD   +N +  GL +++ 
Sbjct: 478 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 537

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
              ++++ Q M+ +G   + +T T+LVE +   D+L+ S        ++Q++SE
Sbjct: 538 ALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKLDQS--------VKQILSE 582



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 195/400 (48%), Gaps = 34/400 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF    +MV +G  PD+   T+L++ LC   + K    ++  M++S I+
Sbjct: 215 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 274

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   ++ +V+ LCK+G +  A  +V+ M   G   N VTYN+L+ G C+   ++++++ 
Sbjct: 275 PDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKV 334

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++  G  PN  +Y+ L+    K + +  A  L +++  K   PN V+YN L+ GLC 
Sbjct: 335 FDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCH 394

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++AI  F ++ + G  P++ +Y ILL  LC +   +EA  LL  ++G +  P I  
Sbjct: 395 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 454

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y I+I  +   G+ + A  +   +     RP+  +Y  +I  LC  G +D   K   +M 
Sbjct: 455 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C P+  TYN +    G+ + +EA                                 +
Sbjct: 515 GNGCSPDGCTYNTITQ--GLLQNKEAL--------------------------------R 540

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           A QLL EM   GF+ D  T + L+  LC + L +   +I 
Sbjct: 541 AIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 580



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 185/379 (48%), Gaps = 1/379 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ +L   +R++     P+   ++ LL +  K +       L + + + G  P++ + N+
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C   R   A      +   G +P+  ++  L+R LC+EG+  +A  L  +M G  
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  LI  L   G T+ A+++L  M +G  +P    Y  II  LC + +V    
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
               +M  +   P+  TY  L   LC + + +    ++  + N +       +  V+ +L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++GK  +A  ++  M   G  P+  TY++L+ G C++  ++EA+++F  M    Y P+V
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            ++N L+ G CK +R D +  +F+ M +K  +PN  TY  L+ G+ H   L+ +  +  E
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 543 LQLRQVVSESAVERLVMQY 561
           +     + + A  R+++ Y
Sbjct: 408 MVAHGQIPDLATYRILLDY 426



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 141/302 (46%), Gaps = 37/302 (12%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   ++ M+ +G +P+VV    L+   C  ++M +A+KV + MV +G  
Sbjct: 285 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 344

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SY  L+N  CK   +  A  L E+M       NTVTYN+L+ GLC +G L  ++  
Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIAL 404

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI--------------------- 229
              ++  G +P+  TY  LL+   K+  +  AM LL  I                     
Sbjct: 405 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 464

Query: 230 --------------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                          +KG +PN+ +Y +++ GLC+ G  +EA + F ++   G  P+  +
Sbjct: 465 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCT 524

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK-VLDEM 334
           YN + + L        A +LL EM     S  + T  +L+  L    K D ++K +L E 
Sbjct: 525 YNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKLDQSVKQILSEF 583

Query: 335 VK 336
           V+
Sbjct: 584 VQ 585


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 219/451 (48%), Gaps = 34/451 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A   ++ M  K   P     TNL+    +   + +A K +  MV SG +PD  +Y 
Sbjct: 145 KLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYN 204

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK G +  A+ LVE M   G   + +TYNS++R L   GN NQ++ F    ++K
Sbjct: 205 MVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRK 264

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   TY+ L+E   K  G   A+++L+D+  +G  P++V+YN L+    K+G+ E+ 
Sbjct: 265 GCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDT 324

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                +L S G +PN V+YN L+ SL   G W+E +++L  M+     PT VTYNIL+  
Sbjct: 325 ALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNG 384

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  D A+     MV     P   +YN +++ LC EG +D  ++ L+ +    C P 
Sbjct: 385 LCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPG 444

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN                                   VI  L R G    A +L  E
Sbjct: 445 LVTYN----------------------------------IVIDGLARLGSMESAKELYDE 470

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  T+SSL  G C    +EEA E+   M   + +     +  ++LGLC+ ++
Sbjct: 471 MVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKK 530

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
            D++++V  +M++    P+E  Y+ L++ +A
Sbjct: 531 VDIAIQVLDLMVKGQCNPDERIYSALIKAVA 561



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 199/393 (50%), Gaps = 3/393 (0%)

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           +T N +++ LC  G L  + + +D + +K  +P+  + + L+    ++  V  A K L+ 
Sbjct: 131 MTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNK 190

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           ++  GG P+ ++YN+++ GLCK GR   A+    D+   G  P+ ++YN ++R L  +G 
Sbjct: 191 MVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGN 250

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
           + +A     +       P ++TY +LI  +  +     AL+VL++M      P   +YN 
Sbjct: 251 FNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNS 310

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           ++     +GK +     +  +     +PN  TYN L   L   G   E   I++ + N+ 
Sbjct: 311 LVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIM-NET 369

Query: 408 NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           +S P    Y  ++  LC+ G   +A      M     +PD  TY++L+ GLC EG I+E 
Sbjct: 370 SSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEG 429

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           +++  ++      P +  +N ++ GL +    + + E++  M++KG +P+E T++ L  G
Sbjct: 430 IQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWG 489

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
               D+LE + E+LKE+ +++   ++   R V+
Sbjct: 490 FCRADQLEEATELLKEMSMKEQRIKNTAYRCVI 522



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 176/404 (43%), Gaps = 79/404 (19%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +++A   L +MV  G  PD +    ++  LCK  +++ A+ ++E M  SG  PDA 
Sbjct: 177 RKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAI 236

Query: 135 SYTYLVNCLCKKGN-----------------------------------VGYAMQLVEKM 159
           +Y  ++ CL  KGN                                      A++++E M
Sbjct: 237 TYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDM 296

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
              G   + VTYNSLV      G    +   +  L+  G+ PNA TY+ L+ +       
Sbjct: 297 AMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLIN---- 352

Query: 220 HAAMKLLDDIIA----KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           H     +DDI+         P  V+YN+LL GLCK G  + AI F+  + ++   P++++
Sbjct: 353 HGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIIT 412

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN LL  LC EG  +E  +LL  + G   SP +VTYNI+I  LA  G  + A ++ DEMV
Sbjct: 413 YNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMV 472

Query: 336 KGRFRPSA-----------------------------------ASYNPIIARLCSEGKVD 360
                P                                      +Y  +I  LC + KVD
Sbjct: 473 DKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVD 532

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSL 403
           + ++ LD M   +C P+E  Y+ L   +   G ++EA  + Q+L
Sbjct: 533 IAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTL 576


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 234/455 (51%), Gaps = 2/455 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  KG   ++   + ++   C+  K+  A   M  ++  G  P+  +++ L+N LC +
Sbjct: 210 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 269

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V  A++LV++M + G+  + +T N+LV GLC+ G   +++  +D++++ G  PNA TY
Sbjct: 270 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 329

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             +L    K      AM+LL  +  +  K + V Y++++ GLCK G  + A   F ++  
Sbjct: 330 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 389

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG   N+++YNIL+   C  GRW++  +LL +M     +P +VT+++LI S    GK   
Sbjct: 390 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 449

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A ++  EM+     P   +Y  +I   C E  +D   + +D M  + C PN  T+N L  
Sbjct: 450 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 509

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C   ++ +   + + +  +   +    Y  +I   C  GK   A +L  EM      P
Sbjct: 510 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 569

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TY  L+ GLC  G  E+ALEIF  +E+   + D+  +N ++ G+C + + D + ++F
Sbjct: 570 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 629

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             +  KG  P   TY I++ G+  +  L   AE+L
Sbjct: 630 CSLPLKGVKPGVKTYNIMIGGLCKKGPLS-EAELL 663



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 239/471 (50%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL  AF  + +++  G++P+ +  + L+  LC   ++ +A+++++ MV  G  PD  
Sbjct: 233 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 292

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   LVN LC  G    AM L++KM +YG   N VTY  ++  +C  G    +++ L ++
Sbjct: 293 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 352

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ +  +A  YS +++   K   +  A  L +++  KG   N+++YN+L+ G C  GR 
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++  +  RD+  +   PNVV++++L+ S   EG+  EA EL  EM     +P  +TY  L
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I         D A +++D MV     P+  ++N +I   C   ++D  ++   +M  R  
Sbjct: 473 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 532

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TYN L    C +GK+  A  + Q + +++       YK ++  LC  G++ +A +
Sbjct: 533 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 592

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  ++ K     D   Y+ +I G+C    +++A ++F  +     KP V  +N ++ GLC
Sbjct: 593 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 652

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K      +  +F+ M E G  P+  TY IL+       +   S ++++EL+
Sbjct: 653 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 703



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 236/475 (49%), Gaps = 3/475 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K +DA      M+     P V+  + L   + K  +    + + + M   GI  +  +
Sbjct: 164 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 223

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            + ++NC C+   +  A   + K+   GY  NT+T+++L+ GLC+ G ++++L+ +DR++
Sbjct: 224 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 283

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  T + L+           AM L+D ++  G +PN V+Y  +L  +CK G+T 
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+   R +  +  + + V Y+I++  LC  G  + A  L  EM+    +  I+TYNILI
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           G     G+ D   K+L +M+K +  P+  +++ +I     EGK+    +   +M HR   
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  TY  L    C    + +A  ++  + +K        +  +I   C+  +     +L
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M+  G   D+ TY++LI+G C  G +  A E+F  M      P++  +  LL GLC 
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583

Query: 495 SRRTDLSLEVFQMMIEKGQMPNET-TYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +  ++ +LE+F+  IEK +M  +   Y I++ G+ +  +++ + ++   L L+ V
Sbjct: 584 NGESEKALEIFE-KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 637



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 179/377 (47%), Gaps = 1/377 (0%)

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           + ++     +I    +P    +S L  A  K +     + L   +  KG   NL + +++
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           +   C+  +   A      +   G+EPN ++++ L+  LC+EGR  EA EL+  M     
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P ++T N L+  L   GK   A+ ++D+MV+   +P+A +Y P++  +C  G+  L ++
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347

Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            L +M  R  K +   Y+ +   LC  G +  AF +   +  K  ++    Y  +I   C
Sbjct: 348 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 407

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
             G+     +LL +M K    P+  T+S LI     EG + EA E+   M      PD  
Sbjct: 408 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 467

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + +L+ G CK    D + ++  +M+ KG  PN  T+ IL+ G    + ++   E+ +++
Sbjct: 468 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 527

Query: 544 QLRQVVSESAVERLVMQ 560
            LR VV+++     ++Q
Sbjct: 528 SLRGVVADTVTYNTLIQ 544



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 152/286 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++ KL +A    + M+ +G  PD +  T+L+   CK N + KA +++++MVS G  
Sbjct: 439 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 498

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L+N  CK   +   ++L  KM   G   +TVTYN+L++G C LG LN + + 
Sbjct: 499 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 558

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ + + PN  TY  LL+          A+++ + I     + ++  YN+++ G+C 
Sbjct: 559 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 618

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + ++A   F  LP KG +P V +YNI++  LC +G   EA  L  +M+    +P   T
Sbjct: 619 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 678

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           YNILI +    G    ++K+++E+ +  F   A++   +I  L  +
Sbjct: 679 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDD 724



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 171/362 (47%), Gaps = 11/362 (3%)

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKL-LDDIIAK--GGKPNLVSYNVLLTGLCKE 251
           I + L PN F      +   KE  V +  K+  +D IA+      NL     L +GL  +
Sbjct: 112 IGEKLEPNEF------DEWIKEVDVGSDGKIRYEDFIARMVANDRNLSYRERLRSGLV-D 164

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            + ++AI  FRD+      P V+ ++ L  ++    +++    L  +M+    +  + T 
Sbjct: 165 IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 224

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           +I+I       K   A   + +++K  + P+  +++ +I  LC EG+V   ++ +D+M  
Sbjct: 225 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 284

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              KP+  T N L   LC  GK  EA  +I  +           Y  V+  +C+ G+T  
Sbjct: 285 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 344

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +LL +M +     D+  YS +I GLC  G ++ A  +F  ME      ++  +N L+ 
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 404

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           G C + R D   ++ + MI++   PN  T+++L++    + +L  + E+ KE+  R +  
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464

Query: 551 ES 552
           ++
Sbjct: 465 DT 466


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 234/456 (51%), Gaps = 4/456 (0%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPD 132
           D + +DA  + L RM   G  P+V     LL  LC  N+ ++A+++++MM   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             SYT ++N   K+G++  A     +M D G   N VTY+S++  LC    ++++++ L 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +++ G++PN  TY+ ++           A+  L  + + G +P++V+YN L+  LCK G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R  EA + F  +  +G +P + +Y  LL+    +G   E + LL  M      P    ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ILI + A  GK D A+ V  +M +    P   +Y  +I  LC  G+V+  ++  +QM   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           R  P    YN L   LC   K  +A  +I  + ++       F+  +I S C++G+  ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   M + G  PD  TYS+LI G C+ G ++EA ++   M     KPD   +N L+ G
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            CK  R + +L +F+ M   G  P+  TY I+++G+
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 246/491 (50%), Gaps = 4/491 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSY 136
           +L+  F  L  ++ KG + D +  T LL  LC   +   A+  V+  M   G IP+  SY
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             L+  LC +     A++L++ M D G   P + V+Y +++ G    G+L+++      +
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G++PN  TYS ++ A  K + +  AM++L  ++  G  PN  +YN ++ G C  G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI F + + S G EP+VV+YN L+  LC  GR  EA ++   M      P I TY  L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   A  G       +LD MV+    P+   ++ +I     +GKVD  +    +M  +  
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY   + +LC  G+V++A    + + +++ S     Y  +I SLC   K  +A +
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+ EM   G   D+  ++S+I   C EG + E+ ++F +M     KPD+  ++ L+ G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            + + D + ++   M+  G  P+  TY  L+ G      +E +  + +E++   V  +  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 554 VERLVMQYDFE 564
              +++Q  F+
Sbjct: 586 TYNIILQGLFQ 596



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 225/471 (47%), Gaps = 39/471 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A+     M+ +G  P+VV  ++++  LCKA  M KA++V+  MV +G++P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V+  C  G    A+  ++KM   G   + VTYNSL+  LC  G   ++ +  D +
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMK-LLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            ++GL P   TY  LL+  Y  +G    M  LLD ++  G  PN   +++L+    K+G+
Sbjct: 331 TKRGLKPEITTYGTLLQ-GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +  +G  P+ V+Y  ++  LC  GR E+A     +M     SP  + YN 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI SL    K D A +++ EM+          +N II   C EG+V    K  D M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            KP+  TY+ L                                  I   C  GK  +A +
Sbjct: 510 VKPDIITYSTL----------------------------------IDGYCLAGKMDEATK 535

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M   G  PD  TY++LI G C    +E+AL +F  ME     PD+  +N +L GL 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++RRT  + E++  + E G     +TY I++ G+   +   L+ E L+  Q
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN---LTDEALRMFQ 643



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 4/386 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL- 225
           N  TY  L+   C  G L+     L  +I+KG   +A  ++ LL+    ++    AM + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE--PNVVSYNILLRSL 283
           L  +   G  PN+ SYN+LL GLC E R++EA+   + +P  G +  P+VVSY  ++   
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             EG  ++A     EM      P +VTY+ +I +L      D A++VL  MVK    P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +YN I+   CS G+    +  L +M     +P+  TYN L   LC  G+  EA  +  S
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  +        Y  ++     KG   +   LL  M + G  P+ Y +S LI     +G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++A+ +F  M +    PD   +  ++  LCKS R + ++  F+ MI++   P    Y  
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 523 LVEGIAHQDELELSAEVLKELQLRQV 548
           L+  +   D+ + + E++ E+  R +
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 137/271 (50%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G   D +   +++   CK  ++ ++ K+ ++MV  G+ PD  +Y+ L++  C  G 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A +L+  M   G   + VTYN+L+ G C +  +  +L     +   G+ P+  TY+ 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L+  ++ R   AA +L   I   G +  L +YN++L GLCK   T+EA+R F++L    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +    ++NI++ +L   GR +EA +L A +      P + TY+++  +L   G  +   
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            +   M +     ++   N I+ +L   G +
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 149/310 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ DA    E+M+ +   P  +   +L++ LC  +K  KA +++  M+  GI  D  
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  +++  CK+G V  + +L + M   G   + +TY++L+ G C+ G ++++ + L  +
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ P+  TY+ L+    K   +  A+ L  ++ + G  P++++YN++L GL +  RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   +  +   G +  + +YNI+L  LC     +EA  +   +   D      T+NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG+L   G+ D A  +   +      P   +Y+ +   L  +G ++ +      M    C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 375 KPNEGTYNGL 384
             N    N +
Sbjct: 721 TANSRMLNSI 730



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 41/320 (12%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL--LAEMDGGDRSPTIVTYN 312
           E+A   F +L  +G   ++   N  L  +         +    +A     + +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQMFH 371
           ILIGS    G+ D     L  ++K  FR  A ++ P++  LC++ +  D +   L +M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY------------- 417
             C PN  +YN L   LC   + QEA  ++Q + +     P +   Y             
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 418 ------------------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
                                   +I +LC+     +A ++L  M K G  P+  TY+S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + G C  G  +EA+     M     +PDV  +N+L+  LCK+ R   + ++F  M ++G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 514 MPNETTYTILVEGIAHQDEL 533
            P  TTY  L++G A +  L
Sbjct: 336 KPEITTYGTLLQGYATKGAL 355


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 241/492 (48%), Gaps = 1/492 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H  +DA  Q   M      P       +L  L    +   AI + + M  S + PD  + 
Sbjct: 37  HNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTL 96

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++NC C  G V  A   V K+   GY  NT+T N+L++GLC+ G + ++L+F D+++ 
Sbjct: 97  NIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLA 156

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G   +  +Y  L+    K     AA++LL  I     +PN+V Y++++  LCK+   +E
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDE 216

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   + ++  KG  P+VV+Y+IL+   C+ G+   A +LL EM   + +P I TY IL+ 
Sbjct: 217 AYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +L   GK   A  VL  MVK         Y+ ++   C   +V+   +    M      P
Sbjct: 277 ALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTP 336

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +   Y+ +   LC + +V EA  + + +  K        Y  +I  LC+ G+    + L 
Sbjct: 337 DVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLF 396

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G  PD  TY++LI  LC  G ++ A+ +F  M++   +P+V  F  LL GLCK 
Sbjct: 397 DEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKV 456

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            R   +LE FQ ++ KG   N  TYT+++ G+  +  L+ +  +   ++    +S++   
Sbjct: 457 GRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTF 516

Query: 556 RLVMQYDFEGIE 567
            ++++  F+  E
Sbjct: 517 EIMIRAFFDKDE 528



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 154/311 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +++A+     MV KG  PDVV  + L+   C   ++ +AI ++  MV   I 
Sbjct: 206 DRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENIN 265

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT LV+ LCK+G V  A  ++  M       + V Y++L+ G C++  +N + + 
Sbjct: 266 PDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRV 325

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + Q G+ P+   YS ++    K + V  A+ L ++I  K   P+ V+Y  L+  LCK
Sbjct: 326 FYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCK 385

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR       F ++  +G  P+V++YN L+ +LC  G  + A  L  +M      P + T
Sbjct: 386 SGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYT 445

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           + IL+  L   G+  +AL+   +++   +  +  +Y  +I  LC EG +D  +    +M 
Sbjct: 446 FTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRME 505

Query: 371 HRRCKPNEGTY 381
              C  +  T+
Sbjct: 506 DNGCISDAVTF 516



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 139/265 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L  MV      DVV  + L+   C  N++  A +V   M   G+ 
Sbjct: 276 DALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVT 335

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   Y+ ++N LCK   V  A+ L E++       +TVTY SL+  LC  G ++     
Sbjct: 336 PDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDL 395

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ +G  P+  TY+ L++A  K   +  A+ L + +  +  +PN+ ++ +LL GLCK
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR + A+ FF+DL +KG+  NV +Y +++  LC EG  +EA  L + M+        VT
Sbjct: 456 VGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVT 515

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           + I+I +     + D A K++ EM+
Sbjct: 516 FEIMIRAFFDKDENDKAEKLVREMI 540



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 70/130 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L+ A     +M  +  +P+V   T LL  LCK  ++K A++  + +++ G  
Sbjct: 416 DALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYC 475

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  +YT ++N LCK+G +  A+ L  +MED G  ++ VT+  ++R        +++ + 
Sbjct: 476 LNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKL 535

Query: 191 LDRLIQKGLV 200
           +  +I +GL+
Sbjct: 536 VREMIARGLL 545


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 243/468 (51%), Gaps = 8/468 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF   + M+     P +     LL  L K N   +   +   M  +G+ PD  + + L N
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
           CLC    V  A+  +  +   GY  N VTY +L++GLCM   ++++ +   R+ + G  P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KPNLVSYNVLLTGLCKEGRTE 255
           NA TY  L++   +   V+ A+KL  +++          KP +++Y++++ GLCK GR +
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA   F ++ ++G  P+V+SY+ L+   C  G+W+++  L  EM      P +VT+++LI
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            +L   GK   A K+L+ M++    P+  +YN +I   C  G ++   +    M  +  +
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+E +Y  L    C   KV+EA  +   +     S     Y  ++  L +KGK   A +L
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKL 434

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M  YG + +S  Y   + GLC    + EA+E+F  ++ Y++K +++N++ L+ GLCK
Sbjct: 435 FGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCK 494

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           + + + + E+F+ + ++G  P+  TY I++ G     +++ +A +L E
Sbjct: 495 AGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD-NANILFE 541



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 240/478 (50%), Gaps = 7/478 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++++A   +  ++ +G+ P+VV  T L+  LC  +++ +A ++   M   G  P+A +Y
Sbjct: 140 NRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTY 199

Query: 137 TYLVNCLCKKGNVGYAMQLVEKM----EDYGY--PTNTVTYNSLVRGLCMLGNLNQSLQF 190
             L+  LC+ GNV  A++L ++M      YG       +TY+ ++ GLC +G  +++ + 
Sbjct: 200 GTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKEL 259

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +  +G++P+  +YS L+           +  L D+++ +G +P++V+++VL+  LCK
Sbjct: 260 FEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCK 319

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG+  EA +    +  +G  PN+++YN L+   CM G    A EL   M      P  ++
Sbjct: 320 EGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEIS 379

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI       K   A+ + +EM++    P+  +Y  ++  L  +GKV    K    M 
Sbjct: 380 YTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMK 439

Query: 371 HRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 N   Y   L  LC    + EA  +   L +       E Y  +I  LC+ GK  
Sbjct: 440 TYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLE 499

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A++L  ++++ G  PD  TY+ +I G C  G ++ A  +F  MEE    PD+  +N LL
Sbjct: 500 TAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLL 559

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
            G C+  + +  +++   M++K   PN  + TI+V+ +   ++ +   ++L +  +++
Sbjct: 560 CGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQR 617



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 196/421 (46%), Gaps = 46/421 (10%)

Query: 144 CKKGNVGYAMQLVE----KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           CK GN+  A+Q        M  +  P  + ++N L+ GL  + + +Q     + +   GL
Sbjct: 65  CKTGNIT-AIQAFHFFDLMMRSHPIPPIS-SFNRLLGGLAKINHYSQLFSLYNEMRLAGL 122

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+ FT S L         V  A+  +  I+ +G  PN+V+Y  L+ GLC E R  EA R
Sbjct: 123 SPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATR 182

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM------DGGDRSPTIVTYNI 313
            F  +   G  PN V+Y  L++ LC  G    A +L  EM       G +  P ++TY+I
Sbjct: 183 LFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSI 242

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L   G+ D A ++ +EM      P   SY+ +I   C  GK D      D+M  + 
Sbjct: 243 IIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG 302

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            +P+  T++ L                                  I +LC++GK  +A +
Sbjct: 303 VQPDMVTFSVL----------------------------------IDTLCKEGKVTEAKK 328

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M + G  P+  TY+SLI G CM G +  A E+F+ M     +PD  ++  L+ G C
Sbjct: 329 LLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K+ +   ++ ++  M++ G+ PN TTY  L++G+  + ++  + ++   ++   V + S 
Sbjct: 389 KTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQ 448

Query: 554 V 554
           +
Sbjct: 449 I 449



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 153/298 (51%), Gaps = 4/298 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++ K+ +A   LE M+ +G  P+++   +L+   C    +  A ++   M S G+ 
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SYT L+N  CK   V  AM L  +M   G   N  TY +L++GL   G +  + + 
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKL 434

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G+  N+  Y   L+   K   +  AM+L +++ +   K N+ +Y+ L+ GLCK
Sbjct: 435 FGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCK 494

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E A   F  L  +G +P+VV+YNI++   C  G+ + AN L  +M+    +P I+ 
Sbjct: 495 AGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIA 554

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK----VDLVVK 364
           YN L+       K +  +K+L +MV+    P+AAS   ++  LC + K    VDL+ K
Sbjct: 555 YNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPK 612


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 241/454 (53%), Gaps = 7/454 (1%)

Query: 97  DVVQATNLLYDLC-----KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK-KGNVG 150
           D+  +T+ ++DL      + + + KA+ ++ +  + G +P   SY  +++   + K N+ 
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
           +A  + ++M +     N  TYN L+RG C  GN++ +L   D++  KG +PN  TY+ L+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           +   K R +    KLL  +  KG +PNL+SYNV++ GLC+EGR +E      ++  +G+ 
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
            + V+YN L++  C EG + +A  + AEM     +P+++TY  LI S+   G  + A++ 
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
           LD+M      P+  +Y  ++     +G ++   + L +M      P+  TYN L    C 
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            GK+++A A+++ +  K  S     Y  V++  CR     +A ++  EM + G  PD+ T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           YSSLI+G C +   +EA +++  M      PD   + AL+   C     + +L++   M+
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           EKG +P+  TY++L+ G+  Q     +  +L +L
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 241/480 (50%), Gaps = 17/480 (3%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A    ++M +KG  P+VV    L+   CK  K+    K++  M   G+ P+  SY  ++N
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LC++G +     ++ +M   GY  + VTYN+L++G C  GN +Q+L     +++ GL P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ L+ +  K   ++ AM+ LD +  +G  PN  +Y  L+ G  ++G   EA R  
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           R++   GF P+VV+YN L+   C+ G+ E+A  +L +M     SP +V+Y+ ++      
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
              D AL+V  EMV+   +P   +Y+ +I   C + +        ++M      P+E TY
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L    C  G +++A  +   +  K        Y  +I  L ++ +T +A +LL ++  
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583

Query: 441 YGFTPDSYTYS---------------SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
               P   TY                SLI+G CM+G++ EA ++F  M   ++KPD   +
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL-ELSAEVLKELQ 544
           N ++ G C++     +  +++ M++ G + +  T   LV+ +  + ++ EL++ ++  L+
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR 703



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 216/431 (50%), Gaps = 8/431 (1%)

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG-NLNQSLQFL 191
           +S +  +V    +   +  A+ +V   + +G+    ++YN+++        N++ +    
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +++  + PN FTY+ L+        +  A+ L D +  KG  PN+V+YN L+ G CK 
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            + ++  +  R +  KG EPN++SYN+++  LC EGR +E + +L EM+    S   VTY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N LI      G    AL +  EM++    PS  +Y  +I  +C  G ++  ++ LDQM  
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R   PNE TY  L       G + EA+ +++ + +   S     Y  +I   C  GK   
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  +L +M + G +PD  +YS+++ G C    ++EAL +   M E   KPD   +++L+ 
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           G C+ RRT  + ++++ M+  G  P+E TYT L+     + +LE      K LQL   + 
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE------KALQLHNEMV 547

Query: 551 ESAVERLVMQY 561
           E  V   V+ Y
Sbjct: 548 EKGVLPDVVTY 558



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 218/442 (49%), Gaps = 19/442 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++   + A +    M+  G  P V+  T+L++ +CKA  M +A++ ++ M   G+ P+  
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT LV+   +KG +  A +++ +M D G+  + VTYN+L+ G C+ G +  ++  L+ +
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KGL P+  +YS +L    +   V  A+++  +++ KG KP+ ++Y+ L+ G C++ RT
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   + ++   G  P+  +Y  L+ + CMEG  E+A +L  EM      P +VTY++L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    +T  A ++L ++      PS  +Y+ +I   CS  +   VV  +        
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKG------ 614

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                        C  G + EA  + +S+  K +      Y  +I   CR G   +A+ L
Sbjct: 615 ------------FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM K GF   + T  +L++ L  EG + E   + V +       + +    L+    +
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHR 722

Query: 495 SRRTDLSLEVFQMMIEKGQMPN 516
               D+ L+V   M + G +PN
Sbjct: 723 EGNMDVVLDVLAEMAKDGFLPN 744



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 211/454 (46%), Gaps = 36/454 (7%)

Query: 78  KLNDAFLQ--LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           K N +F +   + M+     P+V     L+   C A  +  A+ + + M + G +P+  +
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L++  CK   +    +L+  M   G   N ++YN ++ GLC  G + +    L  + 
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++G   +  TY+ L++   KE   H A+ +  +++  G  P++++Y  L+  +CK G   
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+ F   +  +G  PN  +Y  L+     +G   EA  +L EM+    SP++VTYN LI
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 GK + A+ VL++M +    P   SY+ +++  C    VD  ++   +M  +  K
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           P+  TY+ L                                  I   C + +T +A  L 
Sbjct: 483 PDTITYSSL----------------------------------IQGFCEQRRTKEACDLY 508

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM + G  PD +TY++LI   CMEG +E+AL++   M E    PDV  ++ L+ GL K 
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
            RT  +  +   +  +  +P++ TY  L+E  ++
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 68/138 (49%)

Query: 103 NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           +L+   C    M +A +V E M+     PD ++Y  +++  C+ G++  A  L ++M   
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+  +TVT  +LV+ L   G +N+    +  +++   +  A     L+E  ++E  +   
Sbjct: 670 GFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVV 729

Query: 223 MKLLDDIIAKGGKPNLVS 240
           + +L ++   G  PN +S
Sbjct: 730 LDVLAEMAKDGFLPNGIS 747


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 230/467 (49%), Gaps = 1/467 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     RM+     P +   T LL  + K       + +   M S GI P+  +   
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    +G+A  ++ K+   G+  N  T+N+L+RGLC+ G + + L   D++I +G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K     AA++LL  +     +P++V Y  ++  LCK+ +  +A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++  +G  P++ +YN L+ +LC    W+    LL EM      P +V ++ ++ +L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A  V+D M+K    P+  +YN ++   C   ++D  VK  D M  +   P+ 
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +Y+ L    C + ++++A  + + +  K+       Y  ++  LC  G+   A  L +E
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  +Y  L+  LC    ++EA+ +   +E  +  PD+  +  ++ G+C++  
Sbjct: 409 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + + ++F  +  KG  PN  TYTI++ G+  Q  L  ++++  E++
Sbjct: 469 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 240/475 (50%), Gaps = 10/475 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  AF  L +++  GH+P++     L+  LC   K+ + + + + M+  G  P+  +Y 
Sbjct: 118 RLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYG 177

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK G+   A++L+  ME      + V Y S++  LC    + Q+      +I +
Sbjct: 178 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 237

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ FTY+ L+ A            LL++++     PN+V ++ ++  LCKEG+  EA
Sbjct: 238 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 297

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  +G EPNVV+YN L+   C+    +EA ++   M     +P +V+Y+ LI  
Sbjct: 298 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 357

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                + + A+ + +EM +    P+  +Y+ ++  LC  G++   +    +M  R   P+
Sbjct: 358 YCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 417

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             +Y  L   LC   ++ EA A+++++         + Y  VI  +CR G+   A  L  
Sbjct: 418 FVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFS 477

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            ++  G  P+ +TY+ +I GLC +GL+ EA ++F  M+   Y P+   +N +  G  ++ 
Sbjct: 478 NLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNN 537

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            T   +++ Q M+ +G   + +T T+LVE ++  D L+ S        ++Q++SE
Sbjct: 538 ETLRGIQLLQEMLARGFSADVSTSTVLVEMLS-DDGLDQS--------VKQILSE 583



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 214/433 (49%), Gaps = 1/433 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  A+     M+     P  + +T L+  + K  +    + L  +M+ +G P N  T 
Sbjct: 47  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+   C L  L  +   L ++++ G  PN  T++ L+     E  +   + L D +I 
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 166

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G +PN+V+Y  L+ GLCK G T  AIR  R +     +P+VV Y  ++ SLC + +  +
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  L +EM     SP+I TYN LI +L    +  H   +L+EMV  +  P+   ++ ++ 
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC EGKV      +D M  R  +PN  TYN L    C   ++ EA  +  ++  K  + 
Sbjct: 287 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 346

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+  +  +A  L  EM +    P++ TYS+L+ GLC  G +++A+ +F
Sbjct: 347 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 406

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M      PD  ++  LL  LCK+RR D ++ + + +      P+   YTI+++G+   
Sbjct: 407 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 531 DELELSAEVLKEL 543
            ELE + ++   L
Sbjct: 467 GELEAARDLFSNL 479



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 189/400 (47%), Gaps = 34/400 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++  AF     M+ +G  P +    +L++ LC   + K    ++  MV+S I+
Sbjct: 216 DSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIM 275

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   ++ +V+ LCK+G V  A  +V+ M   G   N VTYN+L+ G C+   ++++++ 
Sbjct: 276 PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKV 335

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG  P+  +YS L+    K + +  AM L +++  K   PN V+Y+ L+ GLC 
Sbjct: 336 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 395

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++AI  F ++ ++G  P+ VSY ILL  LC   R +EA  LL  ++G +  P I  
Sbjct: 396 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 455

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y I+I  +   G+ + A  +   +      P+  +Y  +I  LC +G +    K   +M 
Sbjct: 456 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            +   PN  TYN                                   +     R  +T +
Sbjct: 516 RKGYSPNGCTYN----------------------------------LITRGFLRNNETLR 541

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
             QLL EM   GF+ D  T + L+  L  +GL +   +I 
Sbjct: 542 GIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 581



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 186/372 (50%), Gaps = 5/372 (1%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ +L   +R++     P+   ++ LL +  K +     + L   + + G  PN+ + N+
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C   R   A      +   G +PN+ ++N L+R LC+EG+  E   L  +M G  
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  LI  L   G T  A+++L  M +G  +P    Y  II  LC + +V    
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
               +M H+   P+  TYN L   LC + + +   A++  + N +       +  V+ +L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++GK  +A  ++  M K G  P+  TY++L+ G C+   ++EA+++F  M    + PDV
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH----QDELELSAE 538
            +++ L+ G CK +R + ++ +F+ M  K  +PN  TY+ L+ G+ H    QD + L  E
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 539 VLKELQLRQVVS 550
           ++   Q+   VS
Sbjct: 409 MVTRGQIPDFVS 420



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 132/259 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A    + MV KG  PDVV  + L+   CK  +++KA+ + E M    +IP+  +Y+
Sbjct: 328 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 387

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC  G +  A+ L  +M   G   + V+Y  L+  LC    L++++  L  +   
Sbjct: 388 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 447

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+   Y+ +++   +   + AA  L  ++ +KG  PN+ +Y +++ GLC++G   EA
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 507

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F ++  KG+ PN  +YN++ R            +LL EM     S  + T  +L+  
Sbjct: 508 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 567

Query: 318 LAYHGKTDHALKVLDEMVK 336
           L+  G      ++L E ++
Sbjct: 568 LSDDGLDQSVKQILSEFLQ 586


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 234/455 (51%), Gaps = 2/455 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  KG   ++   + ++   C+  K+  A   M  ++  G  P+  +++ L+N LC +
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V  A++LV++M + G+  + +T N+LV GLC+ G   +++  +D++++ G  PNA TY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             +L    K      AM+LL  +  +  K + V Y++++ GLCK G  + A   F ++  
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG   N+++YNIL+   C  GRW++  +LL +M     +P +VT+++LI S    GK   
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A ++  EM+     P   +Y  +I   C E  +D   + +D M  + C PN  T+N L  
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C   ++ +   + + +  +   +    Y  +I   C  GK   A +L  EM      P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TY  L+ GLC  G  E+ALEIF  +E+   + D+  +N ++ G+C + + D + ++F
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             +  KG  P   TY I++ G+  +  L   AE+L
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLS-EAELL 565



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 239/471 (50%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL  AF  + +++  G++P+ +  + L+  LC   ++ +A+++++ MV  G  PD  
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   LVN LC  G    AM L++KM +YG   N VTY  ++  +C  G    +++ L ++
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ +  +A  YS +++   K   +  A  L +++  KG   N+++YN+L+ G C  GR 
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++  +  RD+  +   PNVV++++L+ S   EG+  EA EL  EM     +P  +TY  L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I         D A +++D MV     P+  ++N +I   C   ++D  ++   +M  R  
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TYN L    C +GK+  A  + Q + +++       YK ++  LC  G++ +A +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  ++ K     D   Y+ +I G+C    +++A ++F  +     KP V  +N ++ GLC
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K      +  +F+ M E G  P+  TY IL+       +   S ++++EL+
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 236/475 (49%), Gaps = 3/475 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K +DA      M+     P V+  + L   + K  +    + + + M   GI  +  +
Sbjct: 66  DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            + ++NC C+   +  A   + K+   GY  NT+T+++L+ GLC+ G ++++L+ +DR++
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  T + L+           AM L+D ++  G +PN V+Y  +L  +CK G+T 
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+   R +  +  + + V Y+I++  LC  G  + A  L  EM+    +  I+TYNILI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           G     G+ D   K+L +M+K +  P+  +++ +I     EGK+    +   +M HR   
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  TY  L    C    + +A  ++  + +K        +  +I   C+  +     +L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M+  G   D+ TY++LI+G C  G +  A E+F  M      P++  +  LL GLC 
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485

Query: 495 SRRTDLSLEVFQMMIEKGQMPNET-TYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +  ++ +LE+F+  IEK +M  +   Y I++ G+ +  +++ + ++   L L+ V
Sbjct: 486 NGESEKALEIFE-KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 539



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 179/377 (47%), Gaps = 1/377 (0%)

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           + ++     +I    +P    +S L  A  K +     + L   +  KG   NL + +++
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           +   C+  +   A      +   G+EPN ++++ L+  LC+EGR  EA EL+  M     
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P ++T N L+  L   GK   A+ ++D+MV+   +P+A +Y P++  +C  G+  L ++
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            L +M  R  K +   Y+ +   LC  G +  AF +   +  K  ++    Y  +I   C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
             G+     +LL +M K    P+  T+S LI     EG + EA E+   M      PD  
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + +L+ G CK    D + ++  +M+ KG  PN  T+ IL+ G    + ++   E+ +++
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429

Query: 544 QLRQVVSESAVERLVMQ 560
            LR VV+++     ++Q
Sbjct: 430 SLRGVVADTVTYNTLIQ 446



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 156/289 (53%), Gaps = 1/289 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++ KL +A    + M+ +G  PD +  T+L+   CK N + KA +++++MVS G  
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L+N  CK   +   ++L  KM   G   +TVTYN+L++G C LG LN + + 
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ + + PN  TY  LL+          A+++ + I     + ++  YN+++ G+C 
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + ++A   F  LP KG +P V +YNI++  LC +G   EA  L  +M+    +P   T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           YNILI +    G    ++K+++E+ +  F   A++   +I  L S+G++
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRL 628


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 234/456 (51%), Gaps = 4/456 (0%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPD 132
           D + +DA  + L RM   G  P+V     LL  LC  N+ ++A+++++MM   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             SYT ++N   K+G++  A     +M D G   N VTYNS++  LC    ++++++ L 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLT 258

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +++ G++PN  TY+ ++           A+  L  + + G +P++V+YN L+  LCK G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R  EA + F  +  +G +P + +Y  LL+    +G   E + LL  M      P    ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ILI + A  GK D A+ V  +M +    P   +Y  +I  LC  G+V+  ++  +QM   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           R  P    YN L   LC   K  +A  +I  + ++       F+  +I S C++G+  ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   M + G  P+  TYS+LI G C+ G ++EA ++   M     KPD   +N L+ G
Sbjct: 499 EKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            CK  R + +L +F+ M   G  P+  TY I+++G+
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 246/491 (50%), Gaps = 4/491 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSY 136
           +L+  F  L  ++ KG + D +  T LL  LC   +   A+  V+  M   G IP+  SY
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             L+  LC +     A++L++ M D G   P + V+Y +++ G    G+L+++      +
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G++PN  TY+ ++ A  K + +  AM++L  ++  G  PN  +YN ++ G C  G+ 
Sbjct: 226 LDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI F + + S G EP+VV+YN L+  LC  GR  EA ++   M      P I TY  L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   A  G       +LD MV+    P+   ++ +I     +GKVD  +    +M  +  
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY   + +LC  G+V++A    + + +++ S     Y  +I SLC   K  +A +
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+ EM   G   D+  ++S+I   C EG + E+ ++F +M     KP++  ++ L+ G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYC 525

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            + + D + ++   M+  G  P+  TY  L+ G      +E +  + +E++   V  +  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 554 VERLVMQYDFE 564
              +++Q  F+
Sbjct: 586 TYNIILQGLFQ 596



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 224/471 (47%), Gaps = 39/471 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A+     M+ +G  P+VV   +++  LCKA  M KA++V+  MV +G++P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V+  C  G    A+  ++KM   G   + VTYNSL+  LC  G   ++ +  D +
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMK-LLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            ++GL P   TY  LL+  Y  +G    M  LLD ++  G  PN   +++L+    K+G+
Sbjct: 331 TKRGLKPEITTYGTLLQ-GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +  +G  P+ V+Y  ++  LC  GR E+A     +M     SP  + YN 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI SL    K D A +++ EM+          +N II   C EG+V    K  D M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            KPN  TY+ L                                  I   C  GK  +A +
Sbjct: 510 VKPNIITYSTL----------------------------------IDGYCLAGKMDEATK 535

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M   G  PD  TY++LI G C    +E+AL +F  ME     PD+  +N +L GL 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++RRT  + E++  + E G     +TY I++ G+   +   L+ E L+  Q
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN---LTDEALRMFQ 643



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 186/390 (47%), Gaps = 4/390 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL- 225
           N  TY  L+   C  G L+     L  +I+KG   +A  ++ LL+    ++    AM + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE--PNVVSYNILLRSL 283
           L  +   G  PN+ SYN+LL GLC E R++EA+   + +P  G +  P+VVSY  ++   
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             EG  ++A     EM      P +VTYN +I +L      D A++VL  MVK    P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +YN I+   CS G+    +  L +M     +P+  TYN L   LC  G+  EA  +  S
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  +        Y  ++     KG   +   LL  M + G  P+ Y +S LI     +G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++A+ +F  M +    PD   +  ++  LCKS R + ++  F+ MI++   P    Y  
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSES 552
           L+  +   D+ + + E++ E+  R +  ++
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDT 479



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 149/310 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ DA    E+M+ +   P  +   +L++ LC  +K  KA +++  M+  GI  D  
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  +++  CK+G V  + +L + M   G   N +TY++L+ G C+ G ++++ + L  +
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ P+  TY+ L+    K   +  A+ L  ++ + G  P++++YN++L GL +  RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   +  +   G +  + +YNI+L  LC     +EA  +   +   D      T+NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG+L   G+ D A  +   +      P   +Y+ +   L  +G ++ +      M    C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 375 KPNEGTYNGL 384
             N    N +
Sbjct: 721 TANSRMLNSI 730



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 137/271 (50%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G   D +   +++   CK  ++ ++ K+ ++MV  G+ P+  +Y+ L++  C  G 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGK 529

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A +L+  M   G   + VTYN+L+ G C +  +  +L     +   G+ P+  TY+ 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L+  ++ R   AA +L   I   G +  L +YN++L GLCK   T+EA+R F++L    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +    ++NI++ +L   GR +EA +L A +      P + TY+++  +L   G  +   
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            +   M +     ++   N I+ +L   G +
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 41/320 (12%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL--LAEMDGGDRSPTIVTYN 312
           E+A   F +L  +G   ++   N  L  +         +    +A     + +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQMFH 371
           ILIGS    G+ D     L  ++K  FR  A ++ P++  LC++ +  D +   L +M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY------------- 417
             C PN  +YN L   LC   + QEA  ++Q + +     P +   Y             
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 418 ------------------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
                                   +I +LC+     +A ++L  M K G  P+  TY+S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + G C  G  +EA+     M     +PDV  +N+L+  LCK+ R   + ++F  M ++G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 514 MPNETTYTILVEGIAHQDEL 533
            P  TTY  L++G A +  L
Sbjct: 336 KPEITTYGTLLQGYATKGAL 355



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 36/256 (14%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A   L  MVS G KPD V    L+   CK ++M+ A+ +   M SSG+ PD  +Y 
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC------------------ 179
            ++  L +      A +L   + + G      TYN ++ GLC                  
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648

Query: 180 -----------MLGNL------NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                      M+G L      +++      L   GLVP+  TYS + E   ++  +   
Sbjct: 649 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 708

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             L   +   G   N    N ++  L + G    A  +   +  K F     + ++ L  
Sbjct: 709 DDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL-D 767

Query: 283 LCMEGRWEEANELLAE 298
           L   G+++E +  L E
Sbjct: 768 LLSGGKYQEYHRFLPE 783


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 241/485 (49%), Gaps = 9/485 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A+  L+ M  +G  P V     ++  LCKA +   A+   + +  +   PD  ++ 
Sbjct: 45  KLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFN 104

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYP-TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            LV+ L K G V  A Q+ E M        N VTY +++ GLC  G L+++++ LD + +
Sbjct: 105 ILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNE 164

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G  PN  TYS L+E   K         LL ++  +G +P+++ YN LL GLCK  R +E
Sbjct: 165 TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDE 224

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+   + +   G  P VV+YN L+   C   + + A  L+  M      P ++ YN +I 
Sbjct: 225 ALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIA 284

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD----LVVKC--LDQMF 370
            L    + D A  +L +MV  R  P   +Y+ II  LC + +VD    L   C  L+ M 
Sbjct: 285 GLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344

Query: 371 HRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C PN GTY   +  LC   K Q+A A+++ + + +       +  VI SLC+     
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A+++   M++    P+   Y++LI GL   G +++A+ +F +M E  ++P V  +N++L
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVL 463

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            GLC   R + ++ + + MI K   P+  +Y  L+ G+     +E + E+ + ++ +   
Sbjct: 464 DGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFA 523

Query: 550 SESAV 554
            E  V
Sbjct: 524 MEVGV 528



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 239/468 (51%), Gaps = 13/468 (2%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+     +L++ LCKA K+ +A ++++ M   GI P  + +  ++  LCK G  G A+  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL-IQKGLVPNAFTYSFLLEAAY 214
            + +       + +T+N LV  L   G + ++ Q  + +      +PN  TY+ ++    
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K+  +  A++LLD +   G  PN+++Y+VL+ GLCK GRT++     +++  +GF+P+V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
            YN LL  LC   R +EA EL+  M      PT+VTYN L+       + D A +++  M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLC----- 388
            +    P   +YN +IA LC + ++D     L QM   RC P+  TY+ +   LC     
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 389 -GVGKVQEAFAIIQSLGNKQNSSPQEF--YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
               K++ A  I++ +  KQ   P     Y  VI  LCR  K+ QA  LL  M      P
Sbjct: 328 DADWKLEAACEILEMM--KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  ++S +I  LC    ++ A +IF +M E + KP+   + AL+ GL K    D ++ VF
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           ++M+E  + P   TY  +++G+     +E +  +++ +  ++   + A
Sbjct: 446 ELMVESFR-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 228/451 (50%), Gaps = 11/451 (2%)

Query: 71  DTRHRDHKLNDAFLQLERM-VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
           D   +  ++ +AF   E M  S    P+VV  T ++  LCK  K+ +AI+++++M  +G 
Sbjct: 108 DALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGC 167

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  +Y+ LV  LCK G       L+++M   G+  + + YN+L+ GLC    L+++L+
Sbjct: 168 CPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE 227

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            +  +I+ G  P   TY+ L+E   + + V  A +L+  +  +G  P++++YN ++ GLC
Sbjct: 228 LVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC 287

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR----W--EEANELLAEMDGGD 303
           ++ R ++A    + + +    P+V++Y+ ++  LC + R    W  E A E+L  M    
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P   TY ++I  L    K+  AL +L  M+     P  +S++ +I  LC    +D   
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITS 421
           K    M  R CKPN   Y  L   L   G+V +A  + + +   ++  P    Y  V+  
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM--VESFRPGVATYNSVLDG 465

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC  G+  +A +++  M      PD  +Y +LIRGLC    +EEA E+F  +E   +  +
Sbjct: 466 LCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           V  +N L+  LCK +R   +  V   +IE G
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 209/416 (50%), Gaps = 11/416 (2%)

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N L + G  G A+QL    E+   P N  TY SL+ GLC  G L+Q+ + LD +  +G+
Sbjct: 5   LNLLVRAGQHGQAVQLFR--EERCVP-NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P    ++ ++    K      A+     +      P+++++N+L+  L K GR EEA +
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 260 FFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F  +  S    PNVV+Y  ++  LC +G+ + A ELL  M+     P ++TY++L+  L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+TD    +L EM +  F+P    YN ++  LC   ++D  ++ +  M    C P  
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241

Query: 379 GTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L  + C   +V  AF +IQ +  +        Y  VI  LCR  +   A  LL +
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLI------EEALEIFVVMEEYDYKPDVDNFNALLLG 491
           M      PD  TYS++I GLC +  +      E A EI  +M++    P+   +  ++ G
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEG 361

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           LC++R++  +L + + MI+   +P+ +++++++  +    +L+ + ++   +  R+
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 196/388 (50%), Gaps = 15/388 (3%)

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N LVR     G   Q++Q      ++  VPN FTY  L+    K   +  A +LLD++  
Sbjct: 6   NLLVRA----GQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G  P +  +N ++ GLCK GR  +A+ +F+ +      P+++++NIL+ +L   GR EE
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 292 ANELLAEMDGGDRS-PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           A ++   M    +  P +VTY  +I  L   GK D A+++LD M +    P+  +Y+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
             LC  G+ D     L +M  R  +P+   YN L   LC   ++ EA  ++Q +      
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  ++   CR  +  +AF+L+  M++ G  PD   Y+++I GLC +  +++A  +
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTD------LSLEVFQMMIEKGQMPNETTYTIL 523
              M      PDV  ++ ++ GLCK  R D       + E+ +MM + G  PN  TY ++
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSE 551
           +EG+    + + +  +L+ +   +VV +
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPD 386



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 204/413 (49%), Gaps = 10/413 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   L+ M   G  P+V+  + L+  LCKA +  K   +++ M   G  PD  
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y  L+N LCK   +  A++LV+ M   G YPT  VTYNSL+   C    ++++ + +  
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPT-VVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + ++G  P+   Y+ ++    ++  +  A  LL  ++A    P++++Y+ ++ GLCK+ R
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326

Query: 254 T------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
                  E A      +   G  PN  +Y +++  LC   + ++A  LL  M   +  P 
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +++++IGSL      D A K+   M +   +P+  +Y  +I  L   G+VD  V+  +
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            M     +P   TYN  L  LCGVG+++EA  +++ + +K+       Y  +I  LCR  
Sbjct: 447 LMVESF-RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              +A++L   +   GF  +   Y+ L+  LC +  + +A  +   + E  YK
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 143/291 (49%), Gaps = 17/291 (5%)

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRS-PTIVTYNILIGSLAYHGKTDHALKVLDE 333
           + N+L+R+    G+  +A +L  E    +R  P   TY  LI  L   GK D A ++LDE
Sbjct: 4   ALNLLVRA----GQHGQAVQLFRE----ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDE 55

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           M      P  A +N +I  LC  G+    +     +   +C P+  T+N L   L   G+
Sbjct: 56  MRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 393 VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           V+EAF I +S+       P    Y  VI  LC+ GK  +A +LL  M + G  P+  TYS
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            L+ GLC  G  ++   +   M    ++PDV  +N LL GLCKSRR D +LE+ Q+MI  
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           G  P   TY  L+E          S +V +  +L QV+SE      V+ Y+
Sbjct: 236 GCYPTVVTYNSLMELFCR------SKQVDRAFRLIQVMSERGCPPDVINYN 280


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 230/467 (49%), Gaps = 1/467 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     RM+     P +   T LL  + K       + +   M S GI P+  +   
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    +G+A  ++ K+   G+  N  T+N+L+RGLC+ G + + L   D++I +G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K     AA++LL  +     +P++V Y  ++  LCK+ +  +A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++  +G  P++ +YN L+ +LC    W+    LL EM      P +V ++ ++ +L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A  V+D M+K    P+  +YN ++   C   ++D  VK  D M  +   P+ 
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +Y+ L    C + ++++A  + + +  K+       Y  ++  LC  G+   A  L +E
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  +Y  L+  LC    ++EA+ +   +E  +  PD+  +  ++ G+C++  
Sbjct: 400 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + + ++F  +  KG  PN  TYTI++ G+  Q  L  ++++  E++
Sbjct: 460 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 506



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 240/475 (50%), Gaps = 10/475 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  AF  L +++  GH+P++     L+  LC   K+ + + + + M+  G  P+  +Y 
Sbjct: 109 RLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYG 168

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK G+   A++L+  ME      + V Y S++  LC    + Q+      +I +
Sbjct: 169 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 228

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ FTY+ L+ A            LL++++     PN+V ++ ++  LCKEG+  EA
Sbjct: 229 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 288

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  +G EPNVV+YN L+   C+    +EA ++   M     +P +V+Y+ LI  
Sbjct: 289 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 348

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                + + A+ + +EM +    P+  +Y+ ++  LC  G++   +    +M  R   P+
Sbjct: 349 YCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 408

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             +Y  L   LC   ++ EA A+++++         + Y  VI  +CR G+   A  L  
Sbjct: 409 FVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFS 468

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            ++  G  P+ +TY+ +I GLC +GL+ EA ++F  M+   Y P+   +N +  G  ++ 
Sbjct: 469 NLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNN 528

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            T   +++ Q M+ +G   + +T T+LVE ++  D L+ S        ++Q++SE
Sbjct: 529 ETLRGIQLLQEMLARGFSADVSTSTVLVEMLS-DDGLDQS--------VKQILSE 574



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 214/433 (49%), Gaps = 1/433 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  A+     M+     P  + +T L+  + K  +    + L  +M+ +G P N  T 
Sbjct: 38  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+   C L  L  +   L ++++ G  PN  T++ L+     E  +   + L D +I 
Sbjct: 98  NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 157

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G +PN+V+Y  L+ GLCK G T  AIR  R +     +P+VV Y  ++ SLC + +  +
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  L +EM     SP+I TYN LI +L    +  H   +L+EMV  +  P+   ++ ++ 
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC EGKV      +D M  R  +PN  TYN L    C   ++ EA  +  ++  K  + 
Sbjct: 278 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 337

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+  +  +A  L  EM +    P++ TYS+L+ GLC  G +++A+ +F
Sbjct: 338 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 397

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M      PD  ++  LL  LCK+RR D ++ + + +      P+   YTI+++G+   
Sbjct: 398 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 457

Query: 531 DELELSAEVLKEL 543
            ELE + ++   L
Sbjct: 458 GELEAARDLFSNL 470



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 199/430 (46%), Gaps = 42/430 (9%)

Query: 42  IRVLAST-QVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQ 100
           IR+L S  Q    P   VYT          D+  +D ++  AF     M+ +G  P +  
Sbjct: 184 IRLLRSMEQGNCQPDVVVYTSII-------DSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 101 ATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
             +L++ LC   + K    ++  MV+S I+P+   ++ +V+ LCK+G V  A  +V+ M 
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
             G   N VTYN+L+ G C+   ++++++  D ++ KG  P+  +YS L+    K + + 
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            AM L +++  K   PN V+Y+ L+ GLC  GR ++AI  F ++ ++G  P+ VSY ILL
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC   R +EA  LL  ++G +  P I  Y I+I  +   G+ + A  +   +      
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 476

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAII 400
           P+  +Y  +I  LC +G +    K   +M  +   PN  TYN                  
Sbjct: 477 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYN------------------ 518

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
                            +     R  +T +  QLL EM   GF+ D  T + L+  L  +
Sbjct: 519 ----------------LITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDD 562

Query: 461 GLIEEALEIF 470
           GL +   +I 
Sbjct: 563 GLDQSVKQIL 572



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 186/372 (50%), Gaps = 5/372 (1%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ +L   +R++     P+   ++ LL +  K +     + L   + + G  PN+ + N+
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C   R   A      +   G +PN+ ++N L+R LC+EG+  E   L  +M G  
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  LI  L   G T  A+++L  M +G  +P    Y  II  LC + +V    
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
               +M H+   P+  TYN L   LC + + +   A++  + N +       +  V+ +L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++GK  +A  ++  M K G  P+  TY++L+ G C+   ++EA+++F  M    + PDV
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH----QDELELSAE 538
            +++ L+ G CK +R + ++ +F+ M  K  +PN  TY+ L+ G+ H    QD + L  E
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 539 VLKELQLRQVVS 550
           ++   Q+   VS
Sbjct: 400 MVTRGQIPDFVS 411



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 132/259 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A    + MV KG  PDVV  + L+   CK  +++KA+ + E M    +IP+  +Y+
Sbjct: 319 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 378

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC  G +  A+ L  +M   G   + V+Y  L+  LC    L++++  L  +   
Sbjct: 379 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 438

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+   Y+ +++   +   + AA  L  ++ +KG  PN+ +Y +++ GLC++G   EA
Sbjct: 439 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 498

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F ++  KG+ PN  +YN++ R            +LL EM     S  + T  +L+  
Sbjct: 499 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 558

Query: 318 LAYHGKTDHALKVLDEMVK 336
           L+  G      ++L E ++
Sbjct: 559 LSDDGLDQSVKQILSEFLQ 577


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 234/456 (51%), Gaps = 4/456 (0%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPD 132
           D + +DA  + L RM   G  P+V     LL  LC  N+ ++A+++++MM   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             SYT ++N   K+G++  A     +M D G   N VTY+S++  LC    ++++++ L 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +++ G++PN  TY+ ++           A+  L  + + G +P++V+YN L+  LCK G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R  EA + F  +  +G +P + +Y  LL+    +G   E + LL  M      P    ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ILI + A  GK D A+ V  +M +    P   +Y  +I  LC  G+V+  ++  +QM   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           R  P    YN L   LC   K  +A  +I  + ++       F+  +I S C++G+  ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   M + G  PD  TYS+LI G C+ G ++EA ++   M     KPD   +N L+ G
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            CK  R + +L +F+ M   G  P+  TY I+++G+
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 246/491 (50%), Gaps = 4/491 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSY 136
           +L+  F  L  ++ KG + D +  T LL  LC   +   A+  V+  M   G IP+  SY
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             L+  LC +     A++L++ M D G   P + V+Y +++ G    G+L+++      +
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G++PN  TYS ++ A  K + +  AM++L  ++  G  PN  +YN ++ G C  G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI F + + S G EP+VV+YN L+  LC  GR  EA ++   M      P I TY  L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   A  G       +LD MV+    P+   ++ +I     +GKVD  +    +M  +  
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY   + +LC  G+V++A    + + +++ S     Y  +I SLC   K  +A +
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+ EM   G   D+  ++S+I   C EG + E+ ++F +M     KPD+  ++ L+ G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            + + D + ++   M+  G  P+  TY  L+ G      +E +  + +E++   V  +  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 554 VERLVMQYDFE 564
              +++Q  F+
Sbjct: 586 TYNIILQGLFQ 596



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 225/471 (47%), Gaps = 39/471 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A+     M+ +G  P+VV  ++++  LCKA  M KA++V+  MV +G++P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V+  C  G    A+  ++KM   G   + VTYNSL+  LC  G   ++ +  D +
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMK-LLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            ++GL P   TY  LL+  Y  +G    M  LLD ++  G  PN   +++L+    K+G+
Sbjct: 331 TKRGLKPEITTYGTLLQ-GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +  +G  P+ V+Y  ++  LC  GR E+A     +M     SP  + YN 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI SL    K D A +++ EM+          +N II   C EG+V    K  D M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            KP+  TY+ L                                  I   C  GK  +A +
Sbjct: 510 VKPDIITYSTL----------------------------------IDGYCLAGKMDEATK 535

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M   G  PD  TY++LI G C    +E+AL +F  ME     PD+  +N +L GL 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++RRT  + E++  + E G     +TY I++ G+   +   L+ E L+  Q
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN---LTDEALRMFQ 643



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 186/390 (47%), Gaps = 4/390 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL- 225
           N  TY  L+   C  G L+     L  +I+KG   +A  ++ LL+    ++    AM + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE--PNVVSYNILLRSL 283
           L  +   G  PN+ SYN+LL GLC E R++EA+   + +P  G +  P+VVSY  ++   
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             EG  ++A     EM      P +VTY+ +I +L      D A++VL  MVK    P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +YN I+   CS G+    +  L +M     +P+  TYN L   LC  G+  EA  +  S
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  +        Y  ++     KG   +   LL  M + G  P+ Y +S LI     +G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++A+ +F  M +    PD   +  ++  LCKS R + ++  F+ MI++   P    Y  
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSES 552
           L+  +   D+ + + E++ E+  R +  ++
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDT 479



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 137/271 (50%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G   D +   +++   CK  ++ ++ K+ ++MV  G+ PD  +Y+ L++  C  G 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A +L+  M   G   + VTYN+L+ G C +  +  +L     +   G+ P+  TY+ 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L+  ++ R   AA +L   I   G +  L +YN++L GLCK   T+EA+R F++L    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +    ++NI++ +L   GR +EA +L A +      P + TY+++  +L   G  +   
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            +   M +     ++   N I+ +L   G +
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 149/310 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ DA    E+M+ +   P  +   +L++ LC  +K  KA +++  M+  GI  D  
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  +++  CK+G V  + +L + M   G   + +TY++L+ G C+ G ++++ + L  +
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ P+  TY+ L+    K   +  A+ L  ++ + G  P++++YN++L GL +  RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   +  +   G +  + +YNI+L  LC     +EA  +   +   D      T+NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG+L   G+ D A  +   +      P   +Y+ +   L  +G ++ +      M    C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 375 KPNEGTYNGL 384
             N    N +
Sbjct: 721 TANSRMLNSI 730



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 41/320 (12%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL--LAEMDGGDRSPTIVTYN 312
           E+A   F +L  +G   ++   N  L  +         +    +A     + +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQMFH 371
           ILIGS    G+ D     L  ++K  FR  A ++ P++  LC++ +  D +   L +M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY------------- 417
             C PN  +YN L   LC   + QEA  ++Q + +     P +   Y             
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 418 ------------------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
                                   +I +LC+     +A ++L  M K G  P+  TY+S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + G C  G  +EA+     M     +PDV  +N+L+  LCK+ R   + ++F  M ++G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 514 MPNETTYTILVEGIAHQDEL 533
            P  TTY  L++G A +  L
Sbjct: 336 KPEITTYGTLLQGYATKGAL 355



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 36/256 (14%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A   L  MVS G KPD V    L+   CK ++M+ A+ +   M SSG+ PD  +Y 
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC------------------ 179
            ++  L +      A +L   + + G      TYN ++ GLC                  
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648

Query: 180 -----------MLGNL------NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                      M+G L      +++      L   GLVP+  TYS + E   ++  +   
Sbjct: 649 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 708

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             L   +   G   N    N ++  L + G    A  +   +  K F     + ++ L  
Sbjct: 709 DDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL-D 767

Query: 283 LCMEGRWEEANELLAE 298
           L   G+++E +  L E
Sbjct: 768 LLSGGKYQEYHRFLPE 783


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 225/437 (51%), Gaps = 1/437 (0%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           C+  K+  A   M  ++  G  PD  +++ L+N LC +G V  A++LV++M + G+    
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           +T N+LV GLC+ G ++ ++  +DR+++ G  PN  TY  +L+   K      AM+LL  
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +  +  K + V Y++++ GLCK+G  + A   F ++  KGF+ +++ Y  L+R  C  GR
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
           W++  +LL +M     +P +V ++ LI      GK   A ++  EM++    P   +Y  
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I   C E ++D     LD M  + C PN  T+N L    C    + +   + + +  + 
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             +    Y  +I   C  GK   A +L  EM      PD  +Y  L+ GLC  G  E+AL
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           EIF  +E+   + D+  +N ++ G+C + + D + ++F  +  KG  P+  TY I++ G+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537

Query: 528 AHQDELELSAEVLKELQ 544
             +  L  +  + ++++
Sbjct: 538 CKKGSLSEADLLFRKME 554



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 240/471 (50%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL+ AF  + +++  G++PD V  + L+  LC   ++ +A+++++ MV  G  P   
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   LVN LC  G V  A+ L+++M + G+  N VTY  +++ +C  G    +++ L ++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ +  +A  YS +++   K+  +  A  L +++  KG K +++ Y  L+ G C  GR 
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++  +  RD+  +   P+VV+++ L+     EG+  EA EL  EM     SP  VTY  L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       + D A  +LD MV     P+  ++N +I   C    +D  ++   +M  R  
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TYN L    C +GK++ A  + Q + +++       YK ++  LC  G+  +A +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  ++ K     D   Y+ +I G+C    +++A ++F  +     KPDV  +N ++ GLC
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K      +  +F+ M E G  PN  TY IL+     + +   SA++++E++
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 238/491 (48%), Gaps = 25/491 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++DA L ++RMV  G +P+ V    +L  +CK+ +   A++++  M    I  DA  Y+
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK G++  A  L  +ME  G+  + + Y +L+RG C  G  +   + L  +I++
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+   +S L++   KE  +  A +L  ++I +G  P+ V+Y  L+ G CKE + ++A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 + SKG  PN+ ++NIL+   C     ++  EL  +M         VTYN LI  
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK + A ++  EMV  R RP   SY  ++  LC  G+ +  ++  +++   + + +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            G YN +   +C   KV +A+ +  SL  K      + Y  +I  LC+KG   +A  L  
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEG-------LIEE---------------ALEIFVVME 474
           +M + G +P+  TY+ LIR    EG       LIEE               AL     M 
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARML 611

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDL--SLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           +  ++PDV  F  LL   C      +  +  +F+ M   G  PN  TY  +++G+ + + 
Sbjct: 612 KAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNM 671

Query: 533 LELSAEVLKEL 543
           +     VL ++
Sbjct: 672 ISQVPGVLDQM 682



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 226/468 (48%), Gaps = 24/468 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  L++AF     M  KG K D++  T L+   C A +     K++  M+   I 
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++ L++C  K+G +  A +L ++M   G   +TVTY SL+ G C    L+++   
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD ++ KG  PN  T++ L+    K   +   ++L   +  +G   + V+YN L+ G C+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E A   F+++ S+   P++VSY ILL  LC  G  E+A E+  +++       I  
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG---KVDLVVKCLD 367
           YNI+I  +    K D A  +   +     +P   +YN +I  LC +G   + DL+ + ++
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554

Query: 368 QMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           +  H    PN  TYN L  A L G G   ++  +I+ +     S      ++ +++L R 
Sbjct: 555 EDGH---SPNGCTYNILIRAHL-GEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR- 609

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME--GLIEEALEIFVVMEEYDYKPDVD 483
                       M K G  PD +T+++L+R  C+E    + +A  +F  M+   YKP+V 
Sbjct: 610 ------------MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVV 657

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            +N ++ GL           V   M E+G  PN  T +  + G+  QD
Sbjct: 658 TYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQD 705



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 210/434 (48%), Gaps = 3/434 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K   A+ + + M  S   P    ++ L + + +       + L ++ME  G   N  T +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            ++   C    L+ +   + ++I+ G  P+  T+S L+     E  V  A++L+D ++  
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KP L++ N L+ GLC  G+  +A+     +   GF+PN V+Y  +L+ +C  G+   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            ELL +M+        V Y+I+I  L   G  D+A  + +EM    F+     Y  +I  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV--GKVQEAFAIIQSLGNKQNSS 410
            C  G+ D   K L  M  R+  P+   ++ L + C V  GK++EA  + + +  +  S 
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL-IDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C++ +  +A  +L  M   G  P+  T++ LI G C   LI++ LE+F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M       D   +N L+ G C+  + +++ E+FQ M+ +   P+  +Y IL++G+   
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 531 DELELSAEVLKELQ 544
            E E + E+ ++++
Sbjct: 471 GEPEKALEIFEKIE 484



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 175/361 (48%), Gaps = 1/361 (0%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P    +S L     + +     + L   +  KG   NL + ++++   C+  +   A   
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G+EP+ V+++ L+  LC+EGR  EA EL+  M      PT++T N L+  L  
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           +GK   A+ ++D MV+  F+P+  +Y P++  +C  G+  L ++ L +M  R+ K +   
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y+ +   LC  G +  AF +   +  K   +    Y  +I   C  G+     +LL +M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           K   TPD   +S+LI     EG + EA E+   M +    PD   + +L+ G CK  + D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            +  +  +M+ KG  PN  T+ IL+ G    + ++   E+ +++ LR VV+++     ++
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 560 Q 560
           Q
Sbjct: 430 Q 430



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 151/316 (47%), Gaps = 1/316 (0%)

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           VSY   L     + + ++A+  F+++      P ++ ++ L   +    +++   +L  +
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M+    +  + T +I+I       K   A   + +++K  + P   +++ +I  LC EG+
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           V   ++ +D+M     KP   T N L   LC  GKV +A  +I  +        +  Y  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           V+  +C+ G+T  A +LL +M +     D+  YS +I GLC +G ++ A  +F  ME   
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           +K D+  +  L+ G C + R D   ++ + MI++   P+   ++ L++    + +L  + 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 538 EVLKELQLRQVVSESA 553
           E+ KE+  R +  ++ 
Sbjct: 338 ELHKEMIQRGISPDTV 353



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 24/281 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A    + MVS+  +PD+V    LL  LC   + +KA+++ E +  S +  D   Y 
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ +C    V  A  L   +   G   +  TYN ++ GLC  G+L+++     ++ + 
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI----------------------IAKGGK 235
           G  PN  TY+ L+ A   E     + KL+++I                      +  G +
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHE 616

Query: 236 PNLVSYNVLLTGLCKE--GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
           P++ ++  LL   C E      +A   F+++ + G++PNVV+YN +++ L       +  
Sbjct: 617 PDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVP 676

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
            +L +M      P  VT +  I  L        A+ +L +M
Sbjct: 677 GVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 24/228 (10%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +++ +C A+K+  A  +   +   G+ PD  +Y  ++  LCKKG++  A  L  KME+ G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQS----------------------LQFLDRLIQKGLVP 201
           +  N  TYN L+R     G+  +S                      L  L R+++ G  P
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEP 617

Query: 202 NAFTYSFLLEAAYKER--GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           + FT++ LL     E    V+ A  L  ++ A G KPN+V+YN ++ GL       +   
Sbjct: 618 DVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPG 677

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               +  +G +PN V+ +  +  LC +     A  LL +M+  +   T
Sbjct: 678 VLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDNEDVT 725



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA    + M + G+KP+VV    ++  L   N + +   V++ M   G  P+A + +  +
Sbjct: 639 DAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFI 698

Query: 141 NCLCKKGNVGYAMQLVEKMED 161
           + LCK+   G A+ L+ KME+
Sbjct: 699 SGLCKQDLHGSAILLLRKMEN 719


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 241/485 (49%), Gaps = 9/485 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A+  L+ M  +G  P V     ++  LCKA +   A+   + +  +   PD  ++ 
Sbjct: 45  KLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFN 104

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYP-TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            LV+ L K G V  A Q+ E M        N VTY +++ GLC  G L+++++ LD + +
Sbjct: 105 ILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNE 164

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G  PN  TYS L+E   K         LL ++  +G +P+++ YN LL GLCK  R +E
Sbjct: 165 TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDE 224

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+   + +   G  P VV+YN L+   C   + + A  L+  M      P ++ YN +I 
Sbjct: 225 ALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIA 284

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD----LVVKC--LDQMF 370
            L    + D A  +L +MV  R  P   +Y+ II  LC + +VD    L   C  L+ M 
Sbjct: 285 GLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344

Query: 371 HRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C PN GTY   +  LC   K Q+A A+++ + + +       +  VI SLC+     
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A+++   M++    P+   Y++LI GL   G +++A+ +F +M E  ++P V  +N++L
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVL 463

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            GLC   R + ++ + + MI K   P+  +Y  L+ G+     +E + E+ + ++ +   
Sbjct: 464 DGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFA 523

Query: 550 SESAV 554
            E  V
Sbjct: 524 MEVGV 528



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 239/468 (51%), Gaps = 13/468 (2%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+     +L++ LCKA K+ +A ++++ M   GI P  + +  ++  LCK G  G A+  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL-IQKGLVPNAFTYSFLLEAAY 214
            + +       + +T+N LV  L   G + ++ Q  + +      +PN  TY+ ++    
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K+  +  A++LLD +   G  PN+++Y+VL+ GLCK GRT++     +++  +GF+P+V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
            YN LL  LC   R +EA EL+  M      PT+VTYN L+       + D A +++  M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLC----- 388
            +    P   +YN +IA LC + ++D     L QM   RC P+  TY+ +   LC     
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 389 -GVGKVQEAFAIIQSLGNKQNSSPQEF--YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
               K++ A  I++ +  KQ   P     Y  VI  LCR  K+ QA  LL  M      P
Sbjct: 328 DADWKLEAACEILEMM--KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  ++S +I  LC    ++ A +IF +M E + KP+   + AL+ GL K    D ++ VF
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           ++M+E  + P   TY  +++G+     +E +  +++ +  ++   + A
Sbjct: 446 ELMVESFR-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 226/450 (50%), Gaps = 9/450 (2%)

Query: 71  DTRHRDHKLNDAFLQLERM-VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
           D   +  ++ +AF   E M  S    P+VV  T ++  LCK  K+ +AI+++++M  +G 
Sbjct: 108 DALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGC 167

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  +Y+ LV  LCK G       L+++M   G+  + + YN+L+ GLC    L+++L+
Sbjct: 168 CPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE 227

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            +  +I+ G  P   TY+ L+E   + + V  A +L+  +  +G  P++++YN ++ GLC
Sbjct: 228 LVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC 287

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR----W--EEANELLAEMDGGD 303
           ++ R ++A    + + +    P+V++Y+ ++  LC + R    W  E A E+L  M    
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P   TY ++I  L    K+  AL +L  M+     P  +S++ +I  LC    +D   
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           K    M  R CKPN   Y  L   L   G+V +A  + + L  +        Y  V+  L
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGL 466

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C  G+  +A +++  M      PD  +Y +LIRGLC    +EEA E+F  +E   +  +V
Sbjct: 467 CGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEV 526

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
             +N L+  LCK +R   +  V   +IE G
Sbjct: 527 GVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 210/416 (50%), Gaps = 11/416 (2%)

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N L + G  G A+QL    E+   P N  TY SL+ GLC  G L+Q+ + LD +  +G+
Sbjct: 5   LNLLVRAGQHGQAVQLFR--EERCVP-NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P    ++ +++   K      A+     +      P+++++N+L+  L K GR EEA +
Sbjct: 62  PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 260 FFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F  +  S    PNVV+Y  ++  LC +G+ + A ELL  M+     P ++TY++L+  L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+TD    +L EM +  F+P    YN ++  LC   ++D  ++ +  M    C P  
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241

Query: 379 GTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L  + C   +V  AF +IQ +  +        Y  VI  LCR  +   A  LL +
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLI------EEALEIFVVMEEYDYKPDVDNFNALLLG 491
           M      PD  TYS++I GLC +  +      E A EI  +M++    P+   +  ++ G
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEG 361

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           LC++R++  +L + + MI+   +P+ +++++++  +    +L+ + ++   +  R+
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 196/388 (50%), Gaps = 15/388 (3%)

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N LVR     G   Q++Q      ++  VPN FTY  L+    K   +  A +LLD++  
Sbjct: 6   NLLVRA----GQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G  P +  +N ++ GLCK GR  +A+ +F+ +      P+++++NIL+ +L   GR EE
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 292 ANELLAEMDGGDRS-PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           A ++   M    +  P +VTY  +I  L   GK D A+++LD M +    P+  +Y+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
             LC  G+ D     L +M  R  +P+   YN L   LC   ++ EA  ++Q +      
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  ++   CR  +  +AF+L+  M++ G  PD   Y+++I GLC +  +++A  +
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTD------LSLEVFQMMIEKGQMPNETTYTIL 523
              M      PDV  ++ ++ GLCK  R D       + E+ +MM + G  PN  TY ++
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSE 551
           +EG+    + + +  +L+ +   +VV +
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPD 386



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 204/413 (49%), Gaps = 10/413 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   L+ M   G  P+V+  + L+  LCKA +  K   +++ M   G  PD  
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y  L+N LCK   +  A++LV+ M   G YPT  VTYNSL+   C    ++++ + +  
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPT-VVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + ++G  P+   Y+ ++    ++  +  A  LL  ++A    P++++Y+ ++ GLCK+ R
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326

Query: 254 T------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
                  E A      +   G  PN  +Y +++  LC   + ++A  LL  M   +  P 
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +++++IGSL      D A K+   M +   +P+  +Y  +I  L   G+VD  V+  +
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            M     +P   TYN  L  LCGVG+++EA  +++ + +K+       Y  +I  LCR  
Sbjct: 447 LMVESF-RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              +A++L   +   GF  +   Y+ L+  LC +  + +A  +   + E  YK
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 143/291 (49%), Gaps = 17/291 (5%)

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRS-PTIVTYNILIGSLAYHGKTDHALKVLDE 333
           + N+L+R+    G+  +A +L  E    +R  P   TY  LI  L   GK D A ++LDE
Sbjct: 4   ALNLLVRA----GQHGQAVQLFRE----ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDE 55

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           M      P  A +N +I  LC  G+    +     +   +C P+  T+N L   L   G+
Sbjct: 56  MRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115

Query: 393 VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           V+EAF I +S+       P    Y  VI  LC+ GK  +A +LL  M + G  P+  TYS
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            L+ GLC  G  ++   +   M    ++PDV  +N LL GLCKSRR D +LE+ Q+MI  
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           G  P   TY  L+E          S +V +  +L QV+SE      V+ Y+
Sbjct: 236 GCYPTVVTYNSLMELFCR------SKQVDRAFRLIQVMSERGCPPDVINYN 280


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 234/456 (51%), Gaps = 4/456 (0%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPD 132
           D + +DA  + L RM   G  P+V     LL  LC  N+ ++A+++++MM   G    PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPD 198

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             SYT ++N   K+G++  A     +M D G   N VTY+S++  LC    ++++++ L 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +++ G++PN  TY+ ++           A+  L  + + G +P++V+YN L+  LCK G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R  EA + F  +  +G +P + +Y  LL+    +G   E + LL  M      P    ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ILI + A  GK D A+ V  +M +    P   +Y  +I  LC  G+V+  ++  +QM   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           R  P    YN L   LC   K  +A  +I  + ++       F+  +I S C++G+  ++
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   M + G  PD  TYS+LI G C+ G ++EA ++   M     KPD   +N L+ G
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            CK  R + +L +F+ M   G  P+  TY I+++G+
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 244/491 (49%), Gaps = 4/491 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSY 136
           +L+  F  L  ++ KG   D +  T +L  LC   +   A+  V+  M   G IP+  SY
Sbjct: 106 RLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSY 165

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             L+  LC       A++L++ M D G   P + V+Y +++ G    G+L+++      +
Sbjct: 166 NILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G++PN  TYS ++ A  K + +  AM++L  ++  G  PN  +YN ++ G C  G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI F + + S G EP+VV+YN L+  LC  GR  EA ++   M      P I TY  L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   A  G       +LD MV+    P+   ++ +I     +GKVD  +    +M  +  
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY   + +LC  G+V++A    + + +++ S     Y  +I SLC   K  +A +
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKE 465

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+ EM   G   D+  ++S+I   C EG + E+ ++F +M     KPD+  ++ L+ G C
Sbjct: 466 LILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            + + D + ++   M+  G  P+  TY  L+ G      +E +  + +E++   V  +  
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585

Query: 554 VERLVMQYDFE 564
              +++Q  F+
Sbjct: 586 TYNIILQGLFQ 596



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 225/471 (47%), Gaps = 39/471 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A+     M+ +G  P+VV  ++++  LCKA  M KA++V+  MV +G++P+  
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V+  C  G    A+  ++KM   G   + VTYNSL+  LC  G   ++ +  D +
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMK-LLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            ++GL P   TY  LL+  Y  +G    M  LLD ++  G  PN   +++L+    K+G+
Sbjct: 331 TKRGLKPEITTYGTLLQ-GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +  +G  P+ V+Y  ++  LC  GR E+A     +M     SP  + YN 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI SL    K D A +++ EM+          +N II   C EG+V    K  D M    
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            KP+  TY+ L                                  I   C  GK  +A +
Sbjct: 510 VKPDIITYSTL----------------------------------IDGYCLAGKMDEATK 535

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M   G  PD  TY++LI G C    +E+AL +F  ME     PD+  +N +L GL 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++RRT  + E++  + E G     +TY I++ G+   +   L+ E L+  Q
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN---LTDEALRMFQ 643



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 187/390 (47%), Gaps = 4/390 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL- 225
           N  TY  L+   C  G L+     L  +I+KG + +A  ++ +L+    ++    AM + 
Sbjct: 90  NLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIV 149

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE--PNVVSYNILLRSL 283
           L  +   G  PN+ SYN+LL GLC + R++EA+   + +P  G +  P+VVSY  ++   
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             EG  ++A     EM      P +VTY+ +I +L      D A++VL  MVK    P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +YN I+   CS G+    +  L +M     +P+  TYN L   LC  G+  EA  +  S
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  +        Y  ++     KG   +   LL  M + G  P+ Y +S LI     +G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++A+ +F  M +    PD   +  ++  LCKS R + ++  F+ MI++   P    Y  
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSES 552
           L+  +   D+ + + E++ E+  R +  ++
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDT 479



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 137/271 (50%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G   D +   +++   CK  ++ ++ K+ ++MV  G+ PD  +Y+ L++  C  G 
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A +L+  M   G   + VTYN+L+ G C +  +  +L     +   G+ P+  TY+ 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L+  ++ R   AA +L   I   G +  L +YN++L GLCK   T+EA+R F++L    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +    ++NI++ +L   GR +EA +L A +      P + TY+++  +L   G  +   
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            +   M +     ++   N I+ +L   G +
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 149/310 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ DA    E+M+ +   P  +   +L++ LC  +K  KA +++  M+  GI  D  
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  +++  CK+G V  + +L + M   G   + +TY++L+ G C+ G ++++ + L  +
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ P+  TY+ L+    K   +  A+ L  ++ + G  P++++YN++L GL +  RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   +  +   G +  + +YNI+L  LC     +EA  +   +   D      T+NI+
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG+L   G+ D A  +   +      P   +Y+ +   L  +G ++ +      M    C
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 375 KPNEGTYNGL 384
             N    N +
Sbjct: 721 TANSRMLNSI 730



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 41/320 (12%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL--LAEMDGGDRSPTIVTYN 312
           E+A   F +L  +G   ++   N  L  +         +    +A     + +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQMFH 371
           IL+GS    G+ D     L  ++K  F   A ++ P++  LC++ +  D +   L +M  
Sbjct: 96  ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY------------- 417
             C PN  +YN L   LC   + QEA  ++Q + +     P +   Y             
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 418 ------------------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
                                   +I +LC+     +A ++L  M K G  P+  TY+S+
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + G C  G  +EA+     M     +PDV  +N+L+  LCK+ R   + ++F  M ++G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 514 MPNETTYTILVEGIAHQDEL 533
            P  TTY  L++G A +  L
Sbjct: 336 KPEITTYGTLLQGYATKGAL 355



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 36/256 (14%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A   L  MVS G KPD V    L+   CK ++M+ A+ +   M SSG+ PD  +Y 
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC------------------ 179
            ++  L +      A +L   + + G      TYN ++ GLC                  
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648

Query: 180 -----------MLGNL------NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                      M+G L      +++      L   GLVP+  TYS + E   ++  +   
Sbjct: 649 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 708

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             L   +   G   N    N ++  L + G    A  +   +  K F     + ++ L  
Sbjct: 709 DDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL-D 767

Query: 283 LCMEGRWEEANELLAE 298
           L   G+++E +  L E
Sbjct: 768 LLSGGKYQEYHRFLPE 783


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 266/517 (51%), Gaps = 13/517 (2%)

Query: 58  VYTKPNR-----KPGNNNDTRH------RDHKLNDAFLQLER-MVSKGHKPDVVQATNLL 105
           VYT  N      K GN  D +          +L D  ++L+R MV KG  PD+     L+
Sbjct: 224 VYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILI 283

Query: 106 YDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYP 165
              C   + ++A  ++  M+  G+ P+  +Y  L++   ++G++  A ++ ++M   G  
Sbjct: 284 NGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE 343

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            N + +N+L+ G+C  G + ++L+ +  +++KG+ P++ TYS L+E   + + +  A +L
Sbjct: 344 ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFEL 403

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           LD++  +   P +++Y+V++ GLC+ G  +      R++   G +PN V Y  L+ +   
Sbjct: 404 LDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAK 463

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           EGR EE+  +L  M      P +  YN LI       + + A   L EM++ R RP+A +
Sbjct: 464 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHT 523

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
           Y   I      G++++  +  ++M      PN G Y  L    C  G V EAF++ + + 
Sbjct: 524 YGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL 583

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           +++     + Y  +I  L R GK ++AF +  E+ + G  P+++TY+SLI G C +G ++
Sbjct: 584 SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVD 643

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A ++   M      PD+  +N L+ GLCK+   + +  +F  +  +G  PN  TY  +V
Sbjct: 644 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +G         + ++L+E+ LR V  ++ +  +++ +
Sbjct: 704 DGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 740



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 225/492 (45%), Gaps = 37/492 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +  AF  L+ M  +   P V+  + ++  LC+   ++    ++  MV +G+ P+A 
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 452

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L+    K+G V  +  ++E+M + G   +   YNSL+ G C    + ++  +L  +
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++ L PNA TY   ++   K   +  A +  +++++ G  PN+  Y  L+ G CKEG  
Sbjct: 513 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 572

Query: 255 EEAIRFFR-----------------------------------DLPSKGFEPNVVSYNIL 279
            EA   FR                                   +L  KG  PN  +YN L
Sbjct: 573 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 632

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +   C +G  ++A++LL EM     +P IVTYNILI  L   G+ + A  + D++     
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 692

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFA 398
            P+  +Y  ++   C         + L++M  R   P+   YN  L   C   K ++A  
Sbjct: 693 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           + Q +  K  +S   F   +I   C+ GK  +A  LL EM +  F P+  TY+SLI   C
Sbjct: 753 LFQEMLEKGFASTVSF-NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 811

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G++ EA  +++ M+E +  P    + +LL G            +F+ M+ KG  P++ 
Sbjct: 812 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 871

Query: 519 TYTILVEGIAHQ 530
           TY ++++    +
Sbjct: 872 TYYVMIDAYCRE 883



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 238/526 (45%), Gaps = 44/526 (8%)

Query: 61  KPNRKPGNNNDTRH-RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA-I 118
           KPN        T H ++ ++ ++ + LERM  +G  PDV    +L+   CKA +M++A  
Sbjct: 448 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 507

Query: 119 KVMEM----------------------------------MVSSGIIPDASSYTYLVNCLC 144
            +MEM                                  M+S G++P+   YT L+   C
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K+GNV  A  +   +       +  TY+ L+ GL   G ++++      L +KGL+PNAF
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+ L+  + K+  V  A +LL+++  KG  P++V+YN+L+ GLCK G  E A   F D+
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +G  PN V+Y  ++   C       A +LL EM      P    YN+++       K 
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 747

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + AL +  EM++  F  S  S+N +I   C  GK+      L++M  ++  PN  TY  L
Sbjct: 748 EKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C  G + EA  +   +  +      + Y  ++      G   +   L  EM   G 
Sbjct: 807 IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 866

Query: 444 TPDSYTYSSLIRGLCMEGLIEEAL----EIFV--VMEEYDYKPDVDNFNALLLGLCKSRR 497
            PD  TY  +I   C EG + EA     EI V  +  +  ++  +   + +  G   +  
Sbjct: 867 EPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGN 926

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            D + EV + M++ G + N T+   LV+G  +    E S  +LK++
Sbjct: 927 MDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 209/445 (46%), Gaps = 30/445 (6%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P++  +  L++   K G +  A+ +    +++ +  + ++ NSL+  L     +    + 
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 191 LDRLIQKGLVPNAFTYS-----------------FLLEAAYKERGVHAAMKLLDDIIAKG 233
            D +    ++P+ +TY+                  LLE   K R +  A++L   ++ KG
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             P+L +Y++L+ G C E R+ EA     ++   G +P  ++YN L+     +G  E+A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            +  EM        ++ +N L+  +   GK + AL+++ EM++    P + +Y+ +I   
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSL---GNK 406
           C    +    + LD+M  R+  P   TY    NG   LC  G +Q   AI++ +   G K
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIING---LCRCGNLQGTNAILREMVMNGLK 448

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
            N+     Y  ++T+  ++G+  ++  +L  M + G  PD + Y+SLI G C    +EEA
Sbjct: 449 PNAV---VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 505

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
               + M E   +P+   + A + G  K+   +++   F  M+  G +PN   YT L+EG
Sbjct: 506 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 565

Query: 527 IAHQDELELSAEVLKELQLRQVVSE 551
              +  +  +  V + +  R+V+ +
Sbjct: 566 HCKEGNVTEAFSVFRFILSRRVLQD 590



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 155/400 (38%), Gaps = 92/400 (23%)

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE----------------------- 270
           G PN V +++L+    K G   EA+  F  L  K FE                       
Sbjct: 150 GSPNSVIFDMLMDSYRKMGFLVEAVNVF--LGPKNFEFRPSLLSCNSLLGDLLKGNKVEL 207

Query: 271 --------------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR------------ 304
                         P+V +Y  ++ + C  G  ++A  +L EM    R            
Sbjct: 208 FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSM 267

Query: 305 -----SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P + TY+ILI       ++  A  +L EM+    +P   +YN +I     +G +
Sbjct: 268 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDI 327

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           +   +  D+M     + N   +N L   +C  GK+++A  I+Q +  K      + Y  +
Sbjct: 328 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 387

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM------------------- 459
           I   CR     +AF+LL EM K    P   TYS +I GLC                    
Sbjct: 388 IEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL 447

Query: 460 ----------------EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
                           EG +EE+  I   M E    PDV  +N+L++G CK++R + +  
Sbjct: 448 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 507

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
               M+E+   PN  TY   ++G +   E+E++     E+
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 547



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 18/263 (6%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           SP  V +++L+ S    G    A+ V        FRPS  S N ++  L    KV+L  K
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 365 CLDQMFHRRCKPNEGTY-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF--------- 414
             D M   +  P+  TY N ++  C VG V++A  ++  +G K     +           
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 415 --------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  +I   C + ++ +A  +L EM   G  P+  TY++LI G   +G IE+A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             I   M     + ++  +N LL G+CK+ + + +LE+ Q M+EKG  P+  TY++L+EG
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390

Query: 527 IAHQDELELSAEVLKELQLRQVV 549
                 +  + E+L E++ R++ 
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLA 413



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 57/112 (50%)

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           +P+S  +  L+      G + EA+ +F+  + ++++P + + N+LL  L K  + +L  +
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           VF  M     +P+  TYT ++        ++ +  VL E+  +  + + A+E
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIE 262


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 234/441 (53%), Gaps = 7/441 (1%)

Query: 97  DVVQATNLLYDLC-----KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK-KGNVG 150
           D+  +T+ ++DL      +   + KA+ ++ +  + G +P   SY  +++   + K N+ 
Sbjct: 128 DLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNIS 187

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
           +A  + ++M       N  TYN L+RG C+ GNL+ +L+F DR+ +KG +PN  TY+ L+
Sbjct: 188 FAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLI 247

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           +   K R +    +LL  +  KG +PNL+SYNV++ GLC+EGR +E      ++  +G+ 
Sbjct: 248 DGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYS 307

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
            + V+YN L++  C EG + +A  + AEM     SP+++TY  LI S+   G  + A + 
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF 367

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
           LD+M      P+  +Y  ++     +G ++   + L +M      P+  TYN L    C 
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCI 427

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            GK+ +A A+++ +  K  +     Y  V++  CR     +A ++  +M   G  PD+ T
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTIT 487

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           YSSLI+G C +   +EA ++F  M      PD   + AL+   C       ++++   M+
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547

Query: 510 EKGQMPNETTYTILVEGIAHQ 530
           EKG +P+  TY++L+ G+  Q
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQ 568



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 241/489 (49%), Gaps = 20/489 (4%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A    +RM  KG  P+VV    L+   CK  K+    +++  M   G+ P+  SY  
Sbjct: 221 LDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNV 280

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LC++G +     ++ +M   GY  + VTYN+L++G C  GN +Q+L     +++ G
Sbjct: 281 VINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+  TY+ L+ +  K   ++ A + LD +  +G  PN  +Y  L+ G  ++G   EA 
Sbjct: 341 LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R  +++   GF P+VV+YN L+   C+ G+  +A  +L +M     +P +V+Y+ ++   
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
                 D AL+V  +MV    +P   +Y+ +I   C + +        D+M      P+E
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY  L    C  G +Q+A  +   +  K        Y  +I  L ++ +T +A +LL +
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580

Query: 438 MTKYGFTPDSYTYS---------------SLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           +      P   TY                SLI+G CM+G++ EA ++F  M E ++KPD 
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDG 640

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL-ELS---AE 538
             +N ++ G C+      +  +++ M++ G + +  T   LV+ +  + ++ EL+   A 
Sbjct: 641 TAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIAN 700

Query: 539 VLKELQLRQ 547
           VL+  +L +
Sbjct: 701 VLRSCELSE 709



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 222/458 (48%), Gaps = 28/458 (6%)

Query: 106 YDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYP 165
           YDLC +        V +++V S        Y+ L  CL  K     A+ +V   + +G+ 
Sbjct: 127 YDLCNSTS-----SVFDLVVKS--------YSRL--CLIDK-----ALSIVHLSQAHGFM 166

Query: 166 TNTVTYNSLVRGLCMLG-NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
              ++YN+++        N++ +      ++Q  + PN FTY+ L+        +  A++
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALR 226

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
             D +  KG  PN+V+YN L+ G CK  + ++     R +  KG EPN++SYN+++  LC
Sbjct: 227 FFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLC 286

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
            EGR +E + +L EM+    S   VTYN LI      G    AL +  EM++    PS  
Sbjct: 287 REGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVI 346

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL 403
           +Y  +I  +C  G ++   + LDQM  R   PNE TY  L       G + EA+ +++ +
Sbjct: 347 TYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEM 406

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
            +   S     Y  +I   C  GK   A  +L +M + G TPD  +YS+++ G C    +
Sbjct: 407 IDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDV 466

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +EAL +   M     KPD   +++L+ G C+ RRT  + ++F  M+  G  P+E TYT L
Sbjct: 467 DEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTAL 526

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +     + +L+      K +QL   + E  V   V+ Y
Sbjct: 527 INAYCMEGDLQ------KAIQLHNEMVEKGVLPDVVTY 558



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 217/442 (49%), Gaps = 19/442 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++   + A +    M+  G  P V+  T+L++ +CKA  M +A + ++ M   G+ P+  
Sbjct: 322 KEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNER 381

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT LV+   +KG +  A +++++M D G+  + VTYN+L+ G C+ G +  ++  L+ +
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM 441

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KGL P+  +YS +L    +   V  A+++   ++AKG KP+ ++Y+ L+ G C++ RT
Sbjct: 442 KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F ++   G  P+  +Y  L+ + CMEG  ++A +L  EM      P +VTY++L
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    +T  A ++L ++      PS  +Y+ +I   CS  +   VV  +        
Sbjct: 562 INGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKG------ 614

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                        C  G + EA  + +S+  K +      Y  +I   CR G   +A+ L
Sbjct: 615 ------------FCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSL 662

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM K GF   + T  +L++ L  EG + E   +   +       + +    L+    +
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHR 722

Query: 495 SRRTDLSLEVFQMMIEKGQMPN 516
               D+ L+V   M + G +PN
Sbjct: 723 EGNMDVVLDVLAEMAKDGFLPN 744


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 232/456 (50%), Gaps = 2/456 (0%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           T+ R+    +A      + +KG  P V   T LL  L KAN+++K+  V E M   G+ P
Sbjct: 253 TQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSP 311

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D   ++  +N  CK G V  A+QL   ME  G   N VTYN+L+ GLC  GNL+++ +F 
Sbjct: 312 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 371

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           +++++ G+     TYS L+    K    + A  +L + + KG  PN V YN L+ G CK 
Sbjct: 372 EKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKM 431

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G   +A+R   D+ SKG  PN V+ N +++  C  G+ E+A  +L EM     S     +
Sbjct: 432 GNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAF 491

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             +I  L  + + + AL+ L EM+    RP+      ++  LC EGK    V+   ++  
Sbjct: 492 TTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE 551

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +    N  T N L   LC  G +QEA  +++ +  +     +  Y  +I+  C++GK  +
Sbjct: 552 KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE 611

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
            F+L  EM K G  PD++TY+ LI G+C  G ++EA+ ++   +  D  P+V  +  ++ 
Sbjct: 612 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 671

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           G CK+ + +   ++F  ++ +    N   Y  L+  
Sbjct: 672 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRA 707



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 238/476 (50%), Gaps = 1/476 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++AF   E+MV  G    ++  + L+  L K  K  +A  V++  +  G  P+   Y  
Sbjct: 364 LDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT 423

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++  CK GN+G A+++   M   G   N+VT NS+++G C +G + Q+   L+ ++ +G
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N   ++ ++          +A++ L +++ +  +PN      L+ GLCKEG+  +A+
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             +  L  KGF  N+V+ N L+  LC  G  +EA  LL +M         +TYN LI   
Sbjct: 544 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 603

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK +   K+  EMVK    P   +YN +I  +C  GK+D  V   ++   R   PN 
Sbjct: 604 CKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 663

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY  +    C   K++E   +   L  +        Y  +I + CR G T +AF+L  +
Sbjct: 664 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 723

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  P + TYSSLI G+C  G +E+A  +   M +    P+V  + AL+ G CK  +
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            D  + V Q M      PN+ TYT++++G +   +++ +A++L E+  + +V ++ 
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 839



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 236/486 (48%), Gaps = 8/486 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + ++L  ++   E M  +G  PDV   +  +   CK  K++ AI++   M   G+ P+  
Sbjct: 291 KANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVV 349

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK GN+  A +  EKM   G     +TY+ L+ GL  L   N++   L   
Sbjct: 350 TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKET 409

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG  PN   Y+ L++   K   +  A+++  D+++KG  PN V+ N ++ G CK G+ 
Sbjct: 410 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 469

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A     ++ S+GF  N  ++  ++  LCM  R+E A   L EM   +  P       L
Sbjct: 470 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTL 529

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +G L   GK   A+++   +++  F  +  + N +I  LC  G +   V+ L +M  R  
Sbjct: 530 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 589

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
             ++ TYN L +  C  GKV+E F +   +  KQ   P  F Y  +I  +CR GK  +A 
Sbjct: 590 VLDKITYNTLISGCCKEGKVEEGFKLRGEM-VKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L  E       P+ YTY  +I G C    IEE  ++F  +   + + +   +N L+   
Sbjct: 649 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 708

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE----LSAEVLKELQLRQV 548
           C++  T  + ++   M  KG  P   TY+ L+ G+ +   +E    L  E+ KE  L  V
Sbjct: 709 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 768

Query: 549 VSESAV 554
           V  +A+
Sbjct: 769 VCYTAL 774



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 201/382 (52%), Gaps = 1/382 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M+S+G   +    T +++ LC  ++ + A++ +  M+   + P+    T LV  LCK
Sbjct: 476 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 535

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G    A++L  ++ + G+  N VT N+L+ GLC  GN+ ++++ L +++++G V +  T
Sbjct: 536 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKIT 595

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    KE  V    KL  +++ +G +P+  +YN+L+ G+C+ G+ +EA+  + +  
Sbjct: 596 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 655

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S+   PNV +Y +++   C   + EE  +L  E+   +     V YN LI +   +G T 
Sbjct: 656 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 715

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A K+ D+M      P+ A+Y+ +I  +C+ G+++     +D+M      PN   Y  L 
Sbjct: 716 EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 775

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C +G++ +   ++Q + +      +  Y  +I    + G    A +LL+EM   G  
Sbjct: 776 GGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIV 835

Query: 445 PDSYTYSSLIRGLCMEGLIEEA 466
           PD+ TY+ L  G C EG IEE 
Sbjct: 836 PDTVTYNVLTNGFCKEGKIEEG 857



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 162/323 (50%), Gaps = 1/323 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K +DA     R++ KG   ++V    L++ LCK   M++A+++++ M+  G + D  
Sbjct: 535 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 594

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK+G V    +L  +M   G   +T TYN L+ G+C +G L++++   +  
Sbjct: 595 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 654

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + LVPN +TY  +++   K   +    KL  +++ +  + N V YN L+   C+ G T
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA +   D+ SKG  P   +Y+ L+  +C  GR E+A  L+ EM      P +V Y  L
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 774

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG     G+ D  + VL EM      P+  +Y  +I      G +    K L +M  +  
Sbjct: 775 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 834

Query: 375 KPNEGTYNGLAM-LCGVGKVQEA 396
            P+  TYN L    C  GK++E 
Sbjct: 835 VPDTVTYNVLTNGFCKEGKIEEG 857



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 4/290 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ + F     MV +G +PD      L++ +C+  K+ +A+ +     S  ++P+  
Sbjct: 605 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 664

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  CK   +    +L  ++       N+V YN+L+R  C  GN  ++ +  D +
Sbjct: 665 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG+ P   TYS L+        +  A  L+D++  +G  PN+V Y  L+ G CK G+ 
Sbjct: 725 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 784

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++ +   +++ S    PN ++Y +++      G  + A +LL EM G    P  VTYN+L
Sbjct: 785 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 844

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
                  GK +   K+L E   G   P    +     R C+  +VDL  K
Sbjct: 845 TNGFCKEGKIEEG-KLLAEDGVGFNSPLFLIHEAF--RACTR-RVDLWAK 890



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 40/283 (14%)

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
           F+    S GF   + SY +L+RSL + G    A  LL  +                    
Sbjct: 166 FYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRL-------------------- 205

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                D  L VL    K R    A++    +A L   G+  + V  +D + H  C     
Sbjct: 206 ----IDRKLPVLFGDPKNRHIEIASA----MADLNEVGESGVAVAAVDLLIHVYC----- 252

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
                     VG  + A  + + L NK      +   ++++SL +  +  +++  ++E  
Sbjct: 253 -----TQFRNVG-FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW-VFETM 305

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G +PD Y +S+ I   C  G +E+A+++F  ME+    P+V  +N L+ GLCK    D
Sbjct: 306 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 365

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            +    + M++ G      TY++L+ G+   ++   +  VLKE
Sbjct: 366 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKE 408


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 245/467 (52%), Gaps = 3/467 (0%)

Query: 95  KPDVVQATNLLYDLCKANK--MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           +PDV   T L+   C +N      A  V+  M   G+ P+  +++ L+N L  K  +  A
Sbjct: 7   RPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           ++L ++M   GY  + +TY++++ GLC +G+   ++Q L ++ +KG  PN   YS ++++
Sbjct: 67  VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDS 126

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K++ +  AM+ L +++ +G  PN+V+Y+ +L G C  GR+ EA   F+ +  +   P+
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD 186

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            V++NIL+  L  EG   EA  +   M      P + TYN L+       + D A K+ +
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFN 246

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
            MV+    PS  SYN +I   C  G++D     L +M H+   P+  TY+ L    C  G
Sbjct: 247 IMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG 306

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           + Q+A  +++ + +         Y  V+  LC++G   +AF+LL  M +    P+ + Y+
Sbjct: 307 RPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYT 366

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            LI+G+C  G +E A E+F  +     +PDV  +  ++ GL K   ++ + E+F+ M   
Sbjct: 367 ILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVH 426

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
           G +PN  TY ++++G     +   +  +++E+  R   ++S+  +++
Sbjct: 427 GCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 224/437 (51%), Gaps = 3/437 (0%)

Query: 127 SGIIPDASSYTYLVNCLCKKGN--VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
           S I PD  + T L+NC C   +    +A  ++  M   G   N VT+++L+ GL     +
Sbjct: 4   SNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
             +++  D +++ G  P+  TYS ++    K      A++LL  +  KG KPN+V Y+ +
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           +  LCK+    EA+ F  ++ ++G  PNVV+Y+ +L   C  GR  EA  L  +M   + 
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P  VT+NIL+  L+  G    A  V + M++    P+  +YN ++   CS+ ++D   K
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQK 243

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
             + M  + C P+  +YN L    C  G++ EA  ++  + +K  +     Y  ++   C
Sbjct: 244 LFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFC 303

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + G+   A +LL EM  YG  PD  TYS ++ GLC +G ++EA E+   M+E   +P++ 
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIF 363

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +  L+ G+C   + + + E+F  +  KG  P+  TYT+++ G+        + E+ +++
Sbjct: 364 IYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDM 423

Query: 544 QLRQVVSESAVERLVMQ 560
            +   +  S    +++Q
Sbjct: 424 AVHGCLPNSCTYNVIIQ 440



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 234/462 (50%), Gaps = 3/462 (0%)

Query: 74  HRDH-KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           H +H   + AF  L  M   G +P+ V  + LL  L    K+  A+K+ + MV  G  PD
Sbjct: 22  HSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPD 81

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +Y+ ++N LCK G+   A+QL++KME+ G   N V Y++++  LC    + ++++FL 
Sbjct: 82  VITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLS 141

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            ++ +G+ PN  TYS +L         + A  L   ++ +   P+ V++N+L+ GL KEG
Sbjct: 142 EMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEG 201

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              EA   F  +  KG EPNV +YN L+   C + + +EA +L   M     +P++ +YN
Sbjct: 202 MILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYN 261

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ILI      G+ D A  +L EM      P   +Y+ ++   C +G+     K L++M   
Sbjct: 262 ILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSY 321

Query: 373 RCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+  TY+  L  LC  G + EAF +++++   +       Y  +I  +C  GK   A
Sbjct: 322 GLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAA 381

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   +   G  PD  TY+ +I GL   GL  EA E+F  M  +   P+   +N ++ G
Sbjct: 382 RELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
             ++  T  +  + + M+ +G   + +T+ +L + +  +DE+
Sbjct: 442 FLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD-LESRDEI 482



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 180/383 (46%), Gaps = 34/383 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  + +A   L  MV++G  P+VV  +++L+  C   +  +A  + + MV   ++
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  LV+ L K+G +  A  + E M + G   N  TYN+L+ G C    ++++ + 
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +++KG  P+  +Y+ L++   K   +  A  LL ++  K   P+ V+Y+ L+ G C+
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +GR ++A +   ++ S G  P++++Y+I+L  LC +G  +EA ELL  M      P I  
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI 364

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ILI  +   GK + A ++   +     +P   +Y  +I+ L   G  +   +    M 
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA 424

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C PN  TYN                                   +I    R G T  
Sbjct: 425 VHGCLPNSCTYN----------------------------------VIIQGFLRNGDTSN 450

Query: 431 AFQLLYEMTKYGFTPDSYTYSSL 453
           A +L+ EM   GF+ DS T+  L
Sbjct: 451 AGRLIEEMVGRGFSADSSTFQML 473


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 225/437 (51%), Gaps = 1/437 (0%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           C+  K+  A   M  ++  G  PD  +++ L+N LC +G V  A++LV++M + G+    
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           +T N+LV GLC+ G ++ ++  +DR+++ G  PN  TY  +L+   K      AM+LL  
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +  +  K + V Y++++ GLCK+G  + A   F ++  KGF+ +++ Y  L+R  C  GR
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
           W++  +LL +M     +P +V ++ LI      GK   A ++  EM++    P   +Y  
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I   C E ++D     LD M  + C PN  T+N L    C    + +   + + +  + 
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             +    Y  +I   C  GK   A +L  EM      PD  +Y  L+ GLC  G  E+AL
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           EIF  +E+   + D+  +N ++ G+C + + D + ++F  +  KG  P+  TY I++ G+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537

Query: 528 AHQDELELSAEVLKELQ 544
             +  L  +  + ++++
Sbjct: 538 CKKGSLSEADLLFRKME 554



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 240/471 (50%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL+ AF  + +++  G++PD V  + L+  LC   ++ +A+++++ MV  G  P   
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   LVN LC  G V  A+ L+++M + G+  N VTY  +++ +C  G    +++ L ++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ +  +A  YS +++   K+  +  A  L +++  KG K +++ Y  L+ G C  GR 
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++  +  RD+  +   P+VV+++ L+     EG+  EA EL  EM     SP  VTY  L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       + D A  +LD MV     P+  ++N +I   C    +D  ++   +M  R  
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TYN L    C +GK++ A  + Q + +++       YK ++  LC  G+  +A +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  ++ K     D   Y+ +I G+C    +++A ++F  +     KPDV  +N ++ GLC
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K      +  +F+ M E G  PN  TY IL+     + +   SA++++E++
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 210/434 (48%), Gaps = 3/434 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K   A+ + + M  S   P    ++ L + + +       + L ++ME  G   N  T +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            ++   C    L+ +   + ++I+ G  P+  T+S L+     E  V  A++L+D ++  
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KP L++ N L+ GLC  G+  +A+     +   GF+PN V+Y  +L+ +C  G+   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            ELL +M+        V Y+I+I  L   G  D+A  + +EM    F+     Y  +I  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV--GKVQEAFAIIQSLGNKQNSS 410
            C  G+ D   K L  M  R+  P+   ++ L + C V  GK++EA  + + +  +  S 
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL-IDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C++ +  +A  +L  M   G  P+  T++ LI G C   LI++ LE+F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M       D   +N L+ G C+  + +++ E+FQ M+ +   P+  +Y IL++G+   
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 531 DELELSAEVLKELQ 544
            E E + E+ ++++
Sbjct: 471 GEPEKALEIFEKIE 484



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 175/361 (48%), Gaps = 1/361 (0%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P    +S L     + +     + L   +  KG   NL + ++++   C+  +   A   
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G+EP+ V+++ L+  LC+EGR  EA EL+  M      PT++T N L+  L  
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           +GK   A+ ++D MV+  F+P+  +Y P++  +C  G+  L ++ L +M  R+ K +   
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y+ +   LC  G +  AF +   +  K   +    Y  +I   C  G+     +LL +M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           K   TPD   +S+LI     EG + EA E+   M +    PD   + +L+ G CK  + D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            +  +  +M+ KG  PN  T+ IL+ G    + ++   E+ +++ LR VV+++     ++
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 560 Q 560
           Q
Sbjct: 430 Q 430



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 155/289 (53%), Gaps = 1/289 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + M+ +G  PD V  T+L+   CK N++ KA  ++++MVS G  
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L+N  CK   +   ++L  KM   G   +TVTYN+L++G C LG L  + + 
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ + + P+  +Y  LL+          A+++ + I     + ++  YN+++ G+C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + ++A   F  LP KG +P+V +YNI++  LC +G   EA+ L  +M+    SP   T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           YNILI +    G    + K+++E+ +  F   A++   ++  L S+G++
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRL 612



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 37/339 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  L++AF     M  KG K D++  T L+   C A +     K++  M+   I 
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++ L++C  K+G +  A +L ++M   G   +TVTY SL+ G C    L+++   
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKE---------------RGVHA-------------- 221
           LD ++ KG  PN  T++ L+    K                RGV A              
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434

Query: 222 ------AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                 A +L  +++++  +P++VSY +LL GLC  G  E+A+  F  +     E ++  
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YNI++  +C   + ++A +L   +      P + TYNI+IG L   G    A  +  +M 
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +    P+  +YN +I     EG      K ++++  +RC
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI--KRC 591



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 151/316 (47%), Gaps = 1/316 (0%)

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           VSY   L     + + ++A+  F+++      P ++ ++ L   +    +++   +L  +
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M+    +  + T +I+I       K   A   + +++K  + P   +++ +I  LC EG+
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           V   ++ +D+M     KP   T N L   LC  GKV +A  +I  +        +  Y  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           V+  +C+ G+T  A +LL +M +     D+  YS +I GLC +G ++ A  +F  ME   
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           +K D+  +  L+ G C + R D   ++ + MI++   P+   ++ L++    + +L  + 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 538 EVLKELQLRQVVSESA 553
           E+ KE+  R +  ++ 
Sbjct: 338 ELHKEMIQRGISPDTV 353


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 232/456 (50%), Gaps = 2/456 (0%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           T+ R+    +A      + +KG  P V   T LL  L KAN+++K+  V E M   G+ P
Sbjct: 186 TQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSP 244

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D   ++  +N  CK G V  A+QL   ME  G   N VTYN+L+ GLC  GNL+++ +F 
Sbjct: 245 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 304

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           +++++ G+     TYS L+    K    + A  +L + + KG  PN V YN L+ G CK 
Sbjct: 305 EKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKM 364

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G   +A+R   D+ SKG  PN V+ N +++  C  G+ E+A  +L EM     S     +
Sbjct: 365 GNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAF 424

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             +I  L  + + + AL+ L EM+    RP+      ++  LC EGK    V+   ++  
Sbjct: 425 TTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE 484

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +    N  T N L   LC  G +QEA  +++ +  +     +  Y  +I+  C++GK  +
Sbjct: 485 KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE 544

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
            F+L  EM K G  PD++TY+ LI G+C  G ++EA+ ++   +  D  P+V  +  ++ 
Sbjct: 545 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 604

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           G CK+ + +   ++F  ++ +    N   Y  L+  
Sbjct: 605 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRA 640



 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 238/476 (50%), Gaps = 1/476 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++AF   E+MV  G    ++  + L+  L K  K  +A  V++  +  G  P+   Y  
Sbjct: 297 LDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNT 356

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++  CK GN+G A+++   M   G   N+VT NS+++G C +G + Q+   L+ ++ +G
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N   ++ ++          +A++ L +++ +  +PN      L+ GLCKEG+  +A+
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             +  L  KGF  N+V+ N L+  LC  G  +EA  LL +M         +TYN LI   
Sbjct: 477 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 536

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK +   K+  EMVK    P   +YN +I  +C  GK+D  V   ++   R   PN 
Sbjct: 537 CKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 596

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY  +    C   K++E   +   L  +        Y  +I + CR G T +AF+L  +
Sbjct: 597 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 656

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  P + TYSSLI G+C  G +E+A  +   M +    P+V  + AL+ G CK  +
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 716

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            D  + V Q M      PN+ TYT++++G +   +++ +A++L E+  + +V ++ 
Sbjct: 717 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 772



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 236/486 (48%), Gaps = 8/486 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + ++L  ++   E M  +G  PDV   +  +   CK  K++ AI++   M   G+ P+  
Sbjct: 224 KANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVV 282

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK GN+  A +  EKM   G     +TY+ L+ GL  L   N++   L   
Sbjct: 283 TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKET 342

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG  PN   Y+ L++   K   +  A+++  D+++KG  PN V+ N ++ G CK G+ 
Sbjct: 343 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 402

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A     ++ S+GF  N  ++  ++  LCM  R+E A   L EM   +  P       L
Sbjct: 403 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTL 462

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +G L   GK   A+++   +++  F  +  + N +I  LC  G +   V+ L +M  R  
Sbjct: 463 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 522

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
             ++ TYN L +  C  GKV+E F +   +  KQ   P  F Y  +I  +CR GK  +A 
Sbjct: 523 VLDKITYNTLISGCCKEGKVEEGFKLRGEM-VKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L  E       P+ YTY  +I G C    IEE  ++F  +   + + +   +N L+   
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE----LSAEVLKELQLRQV 548
           C++  T  + ++   M  KG  P   TY+ L+ G+ +   +E    L  E+ KE  L  V
Sbjct: 642 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 701

Query: 549 VSESAV 554
           V  +A+
Sbjct: 702 VCYTAL 707



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 210/407 (51%), Gaps = 1/407 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M+S+G   +    T +++ LC  ++ + A++ +  M+   + P+    T LV  LCK
Sbjct: 409 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 468

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G    A++L  ++ + G+  N VT N+L+ GLC  GN+ ++++ L +++++G V +  T
Sbjct: 469 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKIT 528

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    KE  V    KL  +++ +G +P+  +YN+L+ G+C+ G+ +EA+  + +  
Sbjct: 529 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 588

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S+   PNV +Y +++   C   + EE  +L  E+   +     V YN LI +   +G T 
Sbjct: 589 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 648

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A K+ D+M      P+ A+Y+ +I  +C+ G+++     +D+M      PN   Y  L 
Sbjct: 649 EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 708

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C +G++ +   ++Q + +      +  Y  +I    + G    A +LL+EM   G  
Sbjct: 709 GGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIV 768

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           PD+ TY+ L  G C EG IEE  +I   M +     D   +  L+ G
Sbjct: 769 PDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 217/457 (47%), Gaps = 3/457 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA      MVSKG  P+ V   +++   CK  +M++A  ++E M+S G   +  ++T 
Sbjct: 367 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 426

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++ LC       A++ + +M       N     +LV GLC  G  + +++   RL++KG
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N  T + L+    K   +  A++LL  ++ +G   + ++YN L++G CKEG+ EE  
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 546

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +   ++  +G EP+  +YN+L+  +C  G+ +EA  L  E    D  P + TY ++I   
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               K +   K+  E++      ++  YN +I   C  G      K  D M  +   P  
Sbjct: 607 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 666

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            TY+ L   +C +G++++A  +I  +  K+   P    Y  +I   C+ G+  +   +L 
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEM-RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 725

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM+ Y   P+  TY+ +I G    G ++ A ++   M      PD   +N L  G CK  
Sbjct: 726 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 785

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           + +   ++   M ++G   +E TYT LV G      L
Sbjct: 786 KIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 164/326 (50%), Gaps = 1/326 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K +DA     R++ KG   ++V    L++ LCK   M++A+++++ M+  G + D  
Sbjct: 468 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 527

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK+G V    +L  +M   G   +T TYN L+ G+C +G L++++   +  
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 587

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + LVPN +TY  +++   K   +    KL  +++ +  + N V YN L+   C+ G T
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA +   D+ SKG  P   +Y+ L+  +C  GR E+A  L+ EM      P +V Y  L
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 707

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG     G+ D  + VL EM      P+  +Y  +I      G +    K L +M  +  
Sbjct: 708 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 767

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAI 399
            P+  TYN L    C  GK++E F I
Sbjct: 768 VPDTVTYNVLTNGFCKEGKIEEGFKI 793



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 127/260 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ + F     MV +G +PD      L++ +C+  K+ +A+ +     S  ++P+  
Sbjct: 538 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 597

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  CK   +    +L  ++       N+V YN+L+R  C  GN  ++ +  D +
Sbjct: 598 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 657

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG+ P   TYS L+        +  A  L+D++  +G  PN+V Y  L+ G CK G+ 
Sbjct: 658 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 717

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++ +   +++ S    PN ++Y +++      G  + A +LL EM G    P  VTYN+L
Sbjct: 718 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 777

Query: 315 IGSLAYHGKTDHALKVLDEM 334
                  GK +   K+ D M
Sbjct: 778 TNGFCKEGKIEEGFKICDYM 797



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 40/283 (14%)

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
           F+    S GF   + SY +L+RSL + G    A  LL  +                    
Sbjct: 99  FYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRL-------------------- 138

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                D  L VL    K R    A++    +A L   G+  + V  +D + H  C     
Sbjct: 139 ----IDRKLPVLFGDPKNRHIEIASA----MADLNEVGESGVAVAAVDLLIHVYC----- 185

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
                     VG  + A  + + L NK      +   ++++SL +  +  +++  ++E  
Sbjct: 186 -----TQFRNVG-FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSY-WVFETM 238

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G +PD Y +S+ I   C  G +E+A+++F  ME+    P+V  +N L+ GLCK    D
Sbjct: 239 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 298

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            +    + M++ G      TY++L+ G+   ++   +  VLKE
Sbjct: 299 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKE 341


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 255/492 (51%), Gaps = 23/492 (4%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG---- 128
           +HR  +    F+ ++++   G +PD +    L+  LC+  K+  A+ + + M++      
Sbjct: 283 KHRISEATQLFMSMKKL---GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYG 339

Query: 129 ---IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
              I PD ++ + L++ LCK+G V  A +L+E M   G   + VTY++L++GLCM   ++
Sbjct: 340 IKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRIS 399

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KPNLV 239
           ++      + + G  P+A TY  L++   +   ++ A++L  +++   G      KP L+
Sbjct: 400 EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLI 459

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           SY++++ GLCK+ R +EA   F ++ ++G  P+V+SY  L+   C+ G+WE+A  L  EM
Sbjct: 460 SYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 519

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P + T ++LI  L   GK   A K+L+ +++        +   ++  LC + ++
Sbjct: 520 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRI 579

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ-----NSSPQE 413
               +   +M    C PN  T   L   LC  G ++ A  + +++ +       N  P  
Sbjct: 580 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNA 639

Query: 414 F-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  +I  LC+ G+  +A +L  EM   G  PD  +Y+SLI G C  G  ++A  +F  
Sbjct: 640 ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 699

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M +   +PDV  F+ L+  LCK  +   + E+ ++MI++G +PN  TYT LV+G+   D 
Sbjct: 700 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 759

Query: 533 LELSAEVLKELQ 544
           +  + ++  ++Q
Sbjct: 760 ISEATQLFMKMQ 771



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 232/451 (51%), Gaps = 15/451 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D + ++A    E M ++G  PDV+  T L++  C + K +KA  +   M+  GI 
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 525

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD ++ + L++ LCKKG V  A +L+E +   G   + VT  +LV+GLCM   ++++ Q 
Sbjct: 526 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KPNLVSYNVL 244
             ++ + G +PN  T + L++   +   +  A++L  ++++         KPN +SY+++
Sbjct: 586 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 645

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + GLCK GR +EA   F+++ + G  P+V+SY  L+   C  G+W++A  L  EM     
Sbjct: 646 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 705

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P + T+++LI  L   GK   A ++L+ M++    P+  +Y  ++  LC   ++    +
Sbjct: 706 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQ 765

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF------YKY 417
              +M    C P+  TY  L   LC  G ++ A  + + + +        F      Y  
Sbjct: 766 LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSI 825

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  LC+ G+  +A +L  EM   G  P+  +Y+SLI G C  G +E+A  +F  M +  
Sbjct: 826 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 885

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
            + +   ++ ++ G CK  + D +L  FQ M
Sbjct: 886 VQLNAVTYSVMIHGFCKEGQIDKAL--FQKM 914



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 241/475 (50%), Gaps = 20/475 (4%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +V+   +PDV  ++ L+  LCK  K+ +A +++E+M+  G I D  +Y+ L+  LC +  
Sbjct: 45  IVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHR 104

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG------LVPN 202
           +  A  L   M+  G   + +TY +L++GLC  GN+N +LQ    ++           P 
Sbjct: 105 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 164

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             +YS +++   K+R    A +L  ++ A+G  P+++SY  L+ G C  G+ E+A   F 
Sbjct: 165 LISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFN 224

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++   G +P+V +  +L+   C EG+  EANELL  M        IVTY+ LI  L    
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH 284

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR------RC-K 375
           +   A ++   M K   RP A +Y  ++  LC  GK+++ +    +M +       +C +
Sbjct: 285 RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIR 344

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  T + L  +LC  GKV EA  +++ +  +        Y  +I  LC + +  +A  L
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE------YDYKPDVDNFNAL 488
              M K G  PD+ TY +L++GLC  G I  AL++   M           KP + +++ +
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + GLCK RR D + E+F+ M  +G MP+  +YT L+ G     + E +  +  E+
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 519



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 250/488 (51%), Gaps = 29/488 (5%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY---------LVNCL 143
           G  PD      L+  LC   ++ + +  M  ++  G IPD  +Y+          L++ L
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK+G V  A +L+E M   G   + VTY++L++GLCM   ++++      + + G  P+A
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KPNLVSYNVLLTGLCKEGRTEEA 257
            TY  L++   +   ++ A++L  +++   G      KP L+SY++++ GLCK+ R +EA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F+++ ++G  P+V+SY  L+   C  G+WE+A  L  EM      P + T  +LI  
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK   A ++L+ MV         +Y+ +I  LC + ++    +    M    C+P+
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPD 304

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS-------LCRKGKTY 429
              Y  L   LC  GK+  A  + Q + N  +    +  +  +T+       LC++GK  
Sbjct: 305 AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVI 364

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A +LL  M + G   D  TYS+LI+GLCME  I EA  +F+ M++   +PD   +  L+
Sbjct: 365 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 424

Query: 490 LGLCKSRRTDLSLEVFQMMI-EKGQM-----PNETTYTILVEGIAHQDELELSAEVLKEL 543
            GLC++   +++L++ Q M+ + G+      P   +Y+I+++G+      + + E+ +E+
Sbjct: 425 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEM 484

Query: 544 QLRQVVSE 551
           + + ++ +
Sbjct: 485 KAQGIMPD 492



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 251/507 (49%), Gaps = 20/507 (3%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSG-----I 129
           +H++++A      M   G +PD +    L+  LC+   +  A+++  EM+  +G      
Sbjct: 395 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC 454

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P   SY+ +++ LCK      A +L E+M+  G   + ++Y +L+ G C+ G   ++  
Sbjct: 455 KPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 514

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             + ++  G+ P+  T S L++   K+  V  A KLL+ +I +G   ++V+   L+ GLC
Sbjct: 515 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLC 574

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD------GGD 303
            + R  +A + F  +   G  PNVV+   L++ LC  G  + A EL   M       G +
Sbjct: 575 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 634

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P  ++Y+I+I  L   G+ D A ++  EM      P   SY  +I   C  GK     
Sbjct: 635 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 694

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
              ++M     +P+  T++ L  MLC  GKV EA  +++ +  +        Y  ++  L
Sbjct: 695 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 754

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM----EEY-- 476
           C   +  +A QL  +M K G  PD  TY +L++GLC  G I+ ALE+   M     +Y  
Sbjct: 755 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 814

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           ++KPDV +++ ++ GLCK  R D + E+F+ M   G +PN  +YT L+ G     +LE +
Sbjct: 815 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 874

Query: 537 AEVLKELQLRQVVSESAVERLVMQYDF 563
             +  E+ + Q V  +AV   VM + F
Sbjct: 875 KHLFNEM-VDQGVQLNAVTYSVMIHGF 900



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 256/501 (51%), Gaps = 20/501 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D + ++A    + M ++G  PDV+  T+L++  C + K +KA  +   M+  GI 
Sbjct: 173 DGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQ 232

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD ++   L++  CK+G V  A +L+E M   G   + VTY++L++GLCM   ++++ Q 
Sbjct: 233 PDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQL 292

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII-------AKGGKPNLVSYNV 243
              + + G  P+A  Y  L++   +   ++ A+ L  +++        K  +P++ + ++
Sbjct: 293 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSM 352

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+  LCKEG+  EA      +  +G   ++V+Y+ L++ LCME R  EA  L   M    
Sbjct: 353 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG 412

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK--GRF----RPSAASYNPIIARLCSEG 357
             P  +TY  L+  L   G  + AL++  EM+   GR+    +P+  SY+ II  LC + 
Sbjct: 413 CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 472

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           + D   +  ++M  +   P+  +Y  L    C  GK ++A  +   + +           
Sbjct: 473 REDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 532

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I  LC+KGK  +A +LL  + + G   D  T ++L++GLCM+  I +A ++F+ M++ 
Sbjct: 533 VLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 592

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ------MPNETTYTILVEGIAHQ 530
              P+V     L+ GLC+S    ++LE+ + M+           PN  +Y+I+++G+   
Sbjct: 593 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 652

Query: 531 DELELSAEVLKELQLRQVVSE 551
              + + E+ KE++   V+ +
Sbjct: 653 GREDEARELFKEMKALGVIPD 673



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 230/456 (50%), Gaps = 19/456 (4%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP ++  + ++  LCK  +  +A ++ E M + GI+PD  SYT L++  C  G    A  
Sbjct: 455 KPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 514

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L  +M D G   +  T + L+  LC  G + ++ + L+ +IQ+G + +  T + L++   
Sbjct: 515 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLC 574

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK------G 268
            +  +  A +L   +   G  PN+V+   L+ GLC+ G  + A+   +++ S        
Sbjct: 575 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 634

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +PN +SY+I++  LC  GR +EA EL  EM      P +++Y  LI      GK   A 
Sbjct: 635 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 694

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
            + +EMV    +P   +++ +I  LC EGKV    + L+ M  R C PN  TY  L   L
Sbjct: 695 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 754

Query: 388 CGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL----LYEMTK 440
           C   ++ EA   F  +Q LG   +      Y  ++  LC+ G    A +L    L +  +
Sbjct: 755 CMNDRISEATQLFMKMQKLGCLPDVVT---YGTLMKGLCQTGNIKTALELHKKMLSDTGQ 811

Query: 441 YG--FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
           YG  F PD  +YS +I GLC  G  +EA E+F  M+     P+V ++ +L+ G C+S + 
Sbjct: 812 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 871

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           + +  +F  M+++G   N  TY++++ G   + +++
Sbjct: 872 EDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQID 907



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 251/509 (49%), Gaps = 54/509 (10%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           +PDV  ++ L+  LCK  K+ +A +++E+M+  G I D  +Y+ L+  LC +  +  A  
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 403

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG------LVPNAFTYSF 208
           L   M+  G   + +TY +L++GLC  GN+N +LQ    ++           P   +YS 
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +++   K+R    A +L +++ A+G  P+++SY  L+ G C  G+ E+A   F ++   G
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P+V + ++L+  LC +G+  EAN+LL  +        +VT   L+  L    +   A 
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM------FHRRCKPNEGTYN 382
           ++  +M K    P+  +   ++  LC  G + + ++    M      +   CKPN  +Y+
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 383 GLA-MLCGVGKVQEA---FAIIQSLG------------------NKQNSSPQEF------ 414
            +   LC  G+  EA   F  +++LG                   K   +   F      
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 703

Query: 415 --------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   +  +I  LC++GK  +A +LL  M + G  P++ TY++L++GLCM   I EA
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI-EKGQM-----PNETTY 520
            ++F+ M++    PDV  +  L+ GLC++     +LE+ + M+ + GQ      P+  +Y
Sbjct: 764 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 823

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQVV 549
           +I+++G+      + + E+ KE++   V+
Sbjct: 824 SIIIDGLCKHGREDEARELFKEMKALGVI 852



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 235/490 (47%), Gaps = 22/490 (4%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSG-----I 129
           +H++++A      M   G +PD +    L+  LC+   +  A+++  EM+  +G      
Sbjct: 102 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC 161

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P   SY+ +++ LCK      A +L ++M+  G   + ++Y SL+ G C  G   ++  
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             + ++  G+ P+  T   L++   KE  V  A +LL+ ++ +G   ++V+Y+ L+ GLC
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC 281

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS---- 305
            + R  EA + F  +   G  P+ ++Y  L++ LC  G+   A  L  EM   D S    
Sbjct: 282 MKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML-NDTSQYGI 340

Query: 306 ----PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P + T ++LI  L   GK   A ++L+ M++        +Y+ +I  LC E ++  
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 400

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN-----SSPQEF- 414
                  M    C+P+  TY  L   LC  G +  A  + Q + N          P    
Sbjct: 401 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 460

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I  LC+  +  +A +L  EM   G  PD  +Y++LI G C+ G  E+A  +F  M 
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +   +PDV   + L+  LCK  +   + ++ +++I++G + +  T T LV+G+  +  + 
Sbjct: 521 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRIS 580

Query: 535 LSAEVLKELQ 544
            + ++  ++Q
Sbjct: 581 KATQLFLKMQ 590


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 239/487 (49%), Gaps = 3/487 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H + DA     +++     P VV    LL  L K       I + + M  S I P+  + 
Sbjct: 48  HSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTL 107

Query: 137 TYLVNCLC--KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           T L+NCLC   + +V +A   + KM   G     VT+ +L+ GLC    +  +++  D +
Sbjct: 108 TILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEI 167

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G  P+  TY+ +++   K      A++LL  +  KG KP++V+YN ++  LCK+ R 
Sbjct: 168 GKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRA 227

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA+ FF ++  +G  PNVV+Y+ +L   C  G+  EA  L  +M G +  P  VT+ IL
Sbjct: 228 NEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTIL 287

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G    A +V + M +    P A +Y+ ++   C + ++D   K  D M  +  
Sbjct: 288 VDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+   YN L    C   ++ EA  ++  + ++  +     Y  ++   C+ G+   A +
Sbjct: 348 APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQK 407

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM  YG  PDS TYS L+ GLC  G ++EA  +   M+E   +P +  +N L+ G+C
Sbjct: 408 LFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMC 467

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
              + + + E+F  +  KG  P+  TYT+++ G+  +     + E+ +++ +   +  S 
Sbjct: 468 NFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSC 527

Query: 554 VERLVMQ 560
              + +Q
Sbjct: 528 TYNVAIQ 534



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 227/461 (49%), Gaps = 3/461 (0%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           +RDH ++ AF  L +M   G +P  V    LL  LC   K+  A+K+ + +   G  P  
Sbjct: 118 NRDH-VHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT ++  LCK G+   A+QL++KME+ G   + V YN+++  LC     N+++ F   
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ +G+ PN  TYS +L        ++ A  L   +I +   PN V++ +L+ GLCKEG 
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGM 296

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA R F  +   G EP+  +Y+ L+   C++ + +EA +L   M G   +P++  YNI
Sbjct: 297 ILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNI 356

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI       + + A  +L EM      P   +Y+ ++   C  G+  +  K   +M    
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG 416

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P+  TY+ L   LC  G + EAF +++++   +       Y  +I  +C  GK   A 
Sbjct: 417 LLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAR 476

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L   +   G  P   TY+ +I GL  EGL  EA E+F  M      P+   +N  + G 
Sbjct: 477 ELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF 536

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            ++     ++ + + M+ +G   + +T+ +L++ +   DE+
Sbjct: 537 LRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD-LESNDEI 576



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 183/384 (47%), Gaps = 34/384 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D + N+A      MV +G  P+VV  +++L+  C   ++ +A  + + M+   ++
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++T LV+ LCK+G +  A ++ E M + G   +  TY++L+ G C+   ++++ + 
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG  P+   Y+ L+    K R ++ A  LL ++  +   P+ V+Y+ L+ G C+
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR + A + F+++ S G  P+ ++Y+ILL  LC  G  +EA  LL  M      P I  
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICI 458

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNILI  +   GK + A ++   +     +PS  +Y  +I+ L  EG  +   +   +M 
Sbjct: 459 YNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMV 518

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C PN  TYN                                    I    R G    
Sbjct: 519 VNGCLPNSCTYN----------------------------------VAIQGFLRNGDPSN 544

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLI 454
           A +L+ EM   GF+ DS T+  L+
Sbjct: 545 AVRLIEEMVGRGFSADSSTFQMLL 568


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 251/559 (44%), Gaps = 74/559 (13%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++DA      MV     P +V+   LL  + K NK +  I + E M + GI  D  +Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             +NC C++  +  A+ ++ KM   GY  + VT +SL+ G C    ++ ++  +D++++ 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG----- 252
           G  P+ FT++ L+   +       A+ L+D ++ +G +P+LV+Y  ++ GLCK G     
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 253 ------------------------------RTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                                           E A+  F ++ +KG  PNVV+YN L+  
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  GRW +A+ LL+ M     +P +VT+N LI +    GK   A K+ +EM++    P 
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             +YN +I   C   ++D   +    M  + C PN  TYN L    C   +V++   + +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422

Query: 402 SLGNK---------------------------------QNSSPQEFYKYVIT--SLCRKG 426
            +  +                                  N  P +   Y I    LC  G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           K   A  +   + K     + + Y+++I G+C  G + EA ++F  +     KPDV  +N
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYN 539

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ GLC  R    + ++F+ M E G +PN  TY  L+       +   SAE++KE++  
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599

Query: 547 QVVSESAVERLVMQYDFEG 565
             V +++   LV     +G
Sbjct: 600 GFVGDASTISLVTNMLHDG 618



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 4/290 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    E M+ +   PD +    L+   C  N++ +A ++ + MVS   +
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L+N  CK   V   ++L  +M   G   NTVTY ++++G    G+ + +   
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             +++   +  +  TYS LL        +  A+ +   +     + N+  YN ++ G+CK
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA   F  L  K   P+VV+YN ++  LC +   +EA++L  +M      P   T
Sbjct: 516 AGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YN LI +         + +++ EM    F   A++ + ++  +  +G++D
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLD 621



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 52/288 (18%)

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           +L   G  P V S+     +LC  G WE +    A   G  R        IL   L+   
Sbjct: 17  NLQGIGNPPTVPSF----FNLCGSGCWERS---FASASGDYRE-------ILRNRLSDII 62

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  +MVK R  PS   +N +++ +    K +LV+   +QM             
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM------------- 109

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLLYEMTK 440
                             Q+LG        + Y Y   I   CR+ +   A  +L +M K
Sbjct: 110 ------------------QTLG-----ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G+ PD  T SSL+ G C    I +A+ +   M E  YKPD   F  L+ GL    +   
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           ++ +   M+++G  P+  TY  +V G+  + +++L+  +L +++  ++
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI 254


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 257/486 (52%), Gaps = 2/486 (0%)

Query: 78  KLNDAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +L D  ++L+R MV KG  PD+     L+   C   + ++A  ++  M+  G+ P+  +Y
Sbjct: 264 RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 323

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L++   ++G++  A ++ ++M   G   N + +N+L+ G+C  G + ++L+ +  +++
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 383

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ P++ TYS L+E   + + +  A +LLD++  +   P +++Y+V++ GLC+ G  + 
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 443

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
                R++   G +PN V Y  L+ +   EGR EE+  +L  M      P +  YN LI 
Sbjct: 444 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 503

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + + A   L EM++ R RP+A +Y   I      G++++  +  ++M      P
Sbjct: 504 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 563

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N G Y  L    C  G V EAF++ + + +++     + Y  +I  L R GK ++AF + 
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            E+ + G  P+++TY+SLI G C +G +++A ++   M      PD+  +N L+ GLCK+
Sbjct: 624 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 683

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
              + +  +F  +  +G  PN  TY  +V+G         + ++L+E+ LR V  ++ + 
Sbjct: 684 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 743

Query: 556 RLVMQY 561
            +++ +
Sbjct: 744 NVILNF 749



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 247/515 (47%), Gaps = 37/515 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R   +  AF   + MV+ G + +++    LL  +CKA KM+KA+++M+ M+  G+ 
Sbjct: 328 DGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVE 387

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD+ +Y+ L+   C+  N+  A +L+++M+        +TY+ ++ GLC  GNL  +   
Sbjct: 388 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 447

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++  GL PNA  Y+ L+ A  KE  V  +  +L+ +  +G  P++  YN L+ G CK
Sbjct: 448 LREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCK 507

Query: 251 EGRTEE-----------------------------------AIRFFRDLPSKGFEPNVVS 275
             R EE                                   A R+F ++ S G  PNV  
Sbjct: 508 AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 567

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+   C EG   EA  +   +        + TY++LI  L+ +GK   A  +  E+ 
Sbjct: 568 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 627

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           +    P+A +YN +I+  C +G VD   + L++M  +   P+  TYN L   LC  G+++
Sbjct: 628 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 687

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            A  +   +  +  +     Y  ++   C+      AFQLL EM   G  PD++ Y+ ++
Sbjct: 688 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
              C E   E+AL++F  M E  +   V +FN L+ G CKS +   +  + + MIEK  +
Sbjct: 748 NFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           PN  TYT L++       +  +  +  E+Q R V+
Sbjct: 807 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 841



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 240/490 (48%), Gaps = 36/490 (7%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           +P ++   +LL DL K NK++   KV + M +  ++PD  +YT +++  CK GNV  A +
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           ++ +M + G   N VTYN ++ GLC    L+++++    ++ KGLVP+ +TY  L+    
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296

Query: 215 KER-----------------------------------GVHAAMKLLDDIIAKGGKPNLV 239
            E+                                    +  A ++ D+++A G + NL+
Sbjct: 297 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 356

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            +N LL G+CK G+ E+A+   +++  KG EP+  +Y++L+   C       A ELL EM
Sbjct: 357 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 416

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                +PT++TY+++I  L   G       +L EMV    +P+A  Y  ++     EG+V
Sbjct: 417 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 476

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           +     L++M  +   P+   YN L +  C   +++EA   +  +  ++       Y   
Sbjct: 477 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 536

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I    + G+   A +   EM   G  P+   Y++LI G C EG + EA  +F  +     
Sbjct: 537 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
             DV  ++ L+ GL ++ +   +  +F  + EKG +PN  TY  L+ G   Q  ++ +++
Sbjct: 597 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656

Query: 539 VLKELQLRQV 548
           +L+E+ ++ +
Sbjct: 657 LLEEMCIKGI 666



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 236/524 (45%), Gaps = 43/524 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +  AF  L+ M  +   P V+  + ++  LC+   ++    ++  MV +G+ P+A 
Sbjct: 402 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 461

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L+    K+G V  +  ++E+M + G   +   YNSL+ G C    + ++  +L  +
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++ L PNA TY   ++   K   +  A +  +++++ G  PN+  Y  L+ G CKEG  
Sbjct: 522 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 581

Query: 255 EEAIRFFR-----------------------------------DLPSKGFEPNVVSYNIL 279
            EA   FR                                   +L  KG  PN  +YN L
Sbjct: 582 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +   C +G  ++A++LL EM     +P IVTYNILI  L   G+ + A  + D++     
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFA 398
            P+  +Y  ++   C         + L++M  R   P+   YN  L   C   K ++A  
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           + Q +  K  +S   F   +I   C+ GK  +A  LL EM +  F P+  TY+SLI   C
Sbjct: 762 LFQEMLEKGFASTVSF-NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G++ EA  +++ M+E +  P    + +LL G            +F+ M+ KG  P++ 
Sbjct: 821 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           TY ++++    +        V++  +L+  +    +   V  YD
Sbjct: 881 TYYVMIDAYCRE------GNVMEACKLKDEILVKGMPMSVAAYD 918



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 250/557 (44%), Gaps = 77/557 (13%)

Query: 61   KPNRKPGNNNDTRH-RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA-I 118
            KPN        T H ++ ++ ++ + LERM  +G  PDV    +L+   CKA +M++A  
Sbjct: 457  KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 516

Query: 119  KVMEM----------------------------------MVSSGIIPDASSYTYLVNCLC 144
             +MEM                                  M+S G++P+   YT L+   C
Sbjct: 517  YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576

Query: 145  KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
            K+GNV  A  +   +       +  TY+ L+ GL   G ++++      L +KGL+PNAF
Sbjct: 577  KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636

Query: 205  TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            TY+ L+  + K+  V  A +LL+++  KG  P++V+YN+L+ GLCK G  E A   F D+
Sbjct: 637  TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696

Query: 265  PSKGFEPNVVSY-----------------------------------NILLRSLCMEGRW 289
              +G  PN V+Y                                   N++L   C E ++
Sbjct: 697  EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 756

Query: 290  EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            E+A +L  EM     + T V++N LI      GK   A  +L+EM++ +F P+  +Y  +
Sbjct: 757  EKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815

Query: 350  IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNK 406
            I   C  G +    +   +M  R   P   TY  L  L G   +G + E  A+ + +  K
Sbjct: 816  IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL--LHGYHNIGNMSEVSALFEEMVAK 873

Query: 407  QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                 +  Y  +I + CR+G   +A +L  E+   G       Y +LI+ LC +    E 
Sbjct: 874  GIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEV 933

Query: 467  LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            L++   + E  ++  +   + +  G   +   D + EV + M++ G + N T+   LV+G
Sbjct: 934  LKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993

Query: 527  IAHQDELELSAEVLKEL 543
              +    E S  +LK++
Sbjct: 994  NQNGANSEDSDNLLKQM 1010



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 206/414 (49%), Gaps = 1/414 (0%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P++  +  L++   K G +  A+ +    +++ +  + ++ NSL+  L     +    + 
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +    ++P+ +TY+ ++ A  K   V  A ++L ++  KG  PNLV+YNV++ GLC+
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
               +EAI   R +  KG  P++ +Y+IL+   CME R  EA  +L EM      P  +T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI      G  + A ++ DEMV      +   +N ++  +C  GK++  ++ + +M 
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +  +P+  TY+ L    C    +  AF ++  +  ++ +     Y  +I  LCR G   
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
               +L EM   G  P++  Y++L+     EG +EE+  I   M E    PDV  +N+L+
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 502

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +G CK++R + +      M+E+   PN  TY   ++G +   E+E++     E+
Sbjct: 503 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 556



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 1/279 (0%)

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           PN V +++L+ S    G   EA  +       +  P++++ N L+G L    K +   KV
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCG 389
            D M   +  P   +Y  +I+  C  G V    + L +M  + C PN  TYN +   LC 
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
              + EA  + +S+ +K        Y  +I   C + ++ +A  +L EM   G  P+  T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y++LI G   +G IE+A  I   M     + ++  +N LL G+CK+ + + +LE+ Q M+
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           EKG  P+  TY++L+EG      +  + E+L E++ R++
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 421



 Score = 39.7 bits (91), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 1/145 (0%)

Query: 408 NSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           N SP    +  ++ S  + G   +A  +      + F P   + +SL+  L     +E  
Sbjct: 140 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 199

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            ++F  M  +   PDV  +  ++   CK      +  V   M EKG  PN  TY +++ G
Sbjct: 200 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGG 259

Query: 527 IAHQDELELSAEVLKELQLRQVVSE 551
           +     L+ + E+ + +  + +V +
Sbjct: 260 LCRARLLDEAIELKRSMVDKGLVPD 284


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 260/528 (49%), Gaps = 20/528 (3%)

Query: 20  RKAYGFYSQIPNLHSFSLNKG--FIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDH 77
           RKA   Y+       ++++K   F+R  + +Q           K N K  +  D      
Sbjct: 15  RKAAMLYAATTTRLRYAISKFSVFLRFFSDSQ-----------KQNAKKKSGFDA----- 58

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            ++DA     R+++    P VV+   +L  + K      AI + + M   GI P   + +
Sbjct: 59  -IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLS 117

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+NC C  G++G+A  ++  +   GY  N +T  ++++GLC+ G + ++L+F D ++ +
Sbjct: 118 ILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQ 177

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G + +  TY  L+    K      A +LL  +  +  +PN+V YN+++ GLCK+G   EA
Sbjct: 178 GFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEA 237

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              + D+  +G +P+V +Y  L+   C  G+W E   LL +M   + +  + TYNILI +
Sbjct: 238 RDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDA 297

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G    A  + + M++   RP   ++N +++  C    V    K  D        P+
Sbjct: 298 LCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPD 357

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             +YN L +  C   ++ EA ++   +  K+ +     Y  +I  LC+ G+   A++L  
Sbjct: 358 VWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFS 417

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            +   G +P+  TY+ ++  LC   L+++A+E+F +M E    P+V ++N L+ G CKS+
Sbjct: 418 AIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSK 477

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           R D ++ +F+ M  +  +P+  TY  L++G+     +  + E+   + 
Sbjct: 478 RIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMH 525



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 3/240 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G +PD+V    L+   C  N + +A K+ +     GI PD  SY  L+   CK   
Sbjct: 314 MIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNR 373

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+ L  KM       N VTY+SL+ GLC  G ++ + +    +   G  PN  TY+ 
Sbjct: 374 IDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNI 433

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L+A  K + V  A++L + +  +G  PN+ SYN+L+ G CK  R +EA+  F ++  + 
Sbjct: 434 MLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRN 493

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+ V+YN L+  LC  GR   A EL   M  G     ++TYNIL  + +   K  H +
Sbjct: 494 LVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFS---KIQHVI 550



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 35/294 (11%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +V +G  PDV   T L++  C   + ++  +++  MV   +  +  +Y  L++ LCKKG 
Sbjct: 244 VVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGM 303

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN------------------------- 183
           +G A  +   M + G   + VT+N+L+ G C+  +                         
Sbjct: 304 LGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNI 363

Query: 184 ----------LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
                     ++++L   +++  K L PN  TYS L++   K   +  A +L   I   G
Sbjct: 364 LIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGG 423

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             PN+++YN++L  LCK    ++AI  F  +  +G  PNV SYNIL+   C   R +EA 
Sbjct: 424 PSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAM 483

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
            L  EM   +  P  VTYN LI  L   G+  HA ++ + M  G       +YN
Sbjct: 484 NLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYN 537



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 96/177 (54%), Gaps = 2/177 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +++++++A     +M  K   P++V  ++L+  LCK+ ++  A ++   +   G  P+  
Sbjct: 370 KNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVI 429

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ LCK   V  A++L   M + G   N  +YN L+ G C    +++++   + +
Sbjct: 430 TYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEM 489

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP-NLVSYNVLLTGLCK 250
            ++ LVP++ TY+ L++   K   +  A +L  +++  GG P ++++YN+L     K
Sbjct: 490 HRRNLVPDSVTYNCLIDGLCKSGRISHAWELF-NVMHDGGPPVDVITYNILFDAFSK 545


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/430 (32%), Positives = 235/430 (54%), Gaps = 13/430 (3%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ + S G  P+VV  T L+    +A K+++A+K++E M   G  P+  +Y  LV+ LCK
Sbjct: 45  MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              VG A  +V+KM + G+  N +T+NSLV G C  GN++ + + L  ++ KG+ PN  T
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 164

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS L++   K +    A ++L+++ A G  P+  +Y+ L+ GLCK  + EEA +  R + 
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+VV Y+ ++ + C  G+  EA + L EM    +SP +VTYN +I  L   GK  
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284

Query: 326 HALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDLVV---KCLDQMFHRRCKPNEGTY 381
            A  +LD+M + G   P   +Y+ +I  LC   K D++V   K LD+M    C P+  TY
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLC---KSDMLVEAQKLLDRMCKAGCNPDVVTY 341

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             +   LC  G+++EA  ++Q +     +     Y  +I+ LC+  K  +A +++ EM  
Sbjct: 342 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 401

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE--YDYKPDVDNFNALLLGLCKSRRT 498
            G  P+  TY++++ GLC+ G I+EA ++   M++   +  PD   +  ++  L  S   
Sbjct: 402 AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS--- 458

Query: 499 DLSLEVFQMM 508
           DL  E  Q++
Sbjct: 459 DLVQEAEQLL 468



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 225/438 (51%), Gaps = 5/438 (1%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           C A  +  A++++E M S+G  PDA ++T ++  +   G++  AM  +  M   G   N 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           VTY +L+        L ++++ L+ + ++G  PN  TY+ L++A  K   V AA  ++  
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +I  G  PN++++N L+ G CK G  ++A +    + +KG  PNVV+Y+ L+  LC   +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
           + EA E+L EM     +P   TY+ LI  L    K + A ++L  M      P    Y+ 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQ 407
           II   C  GK+    K L +M  +R  P+  TYN  +  LC +GK+ EA  I+  +    
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 408 NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           +  P    Y  VI  LC+     +A +LL  M K G  PD  TY+++I GLC  G +EEA
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             +   M+     P+V  +  L+ GLCK+R+ D +  V + M   G  PN  TY  +V G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 527 IAHQDELELSAEVLKELQ 544
           +     ++ + ++++ ++
Sbjct: 418 LCVSGRIKEAQQLVQRMK 435



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 202/400 (50%), Gaps = 4/400 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL +A   LE M  +G  P++V    L+  LCK + +  A  V++ M+  G  P+  
Sbjct: 69  RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 128

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  LV+  CK+GNV  A +L+  M   G   N VTY++L+ GLC      ++ + L+ +
Sbjct: 129 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 188

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ P+AFTYS L+    K   +  A ++L  +   G  P++V Y+ ++   CK G+ 
Sbjct: 189 KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 248

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNI 313
            EA +  +++  +   P+VV+YN ++  LC  G+  EA  +L +M + GD  P +VTY+ 
Sbjct: 249 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYST 308

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L        A K+LD M K    P   +Y  II  LC  G+++     L  M    
Sbjct: 309 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 368

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  TY  L + LC   KV EA  +++ + N         Y  ++  LC  G+  +A 
Sbjct: 369 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 428

Query: 433 QLLYEMT--KYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           QL+  M   +   +PD+ TY +++  L    L++EA ++ 
Sbjct: 429 QLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLL 468



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 37/231 (16%)

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    AL++L+EM    F P A ++ PII  + + G +D     +D +    C PN  TY
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTY 60

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             L                                  I +  R  K  +A +LL EM + 
Sbjct: 61  TAL----------------------------------IAAFARAKKLEEAMKLLEEMRER 86

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P+  TY+ L+  LC   ++  A ++   M E  + P+V  FN+L+ G CK    D +
Sbjct: 87  GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDA 146

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            ++  +M+ KG  PN  TY+ L++G+    +   + EVL+E++   V  ++
Sbjct: 147 RKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDA 197


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 224/422 (53%), Gaps = 3/422 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK-KGNVGY-AMQLVEKMEDYGYPTNTV 169
           N + +A+  + +  SSG +P   SY  +++ + + +G+V   A ++  +M       N  
Sbjct: 156 NMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVY 215

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TYN L+RG C +G L + L     + + G +PN  TY+ L++A  K   +  A  LL  +
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
            +KG +PNL+SYNV++ GLC+EG  +EA     ++  KGF P+ V+YN LL   C EG +
Sbjct: 276 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 335

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            +A  + AEM     SP++VTY  LI S+      + A++  D+M     RP+  +Y  +
Sbjct: 336 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 395

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I     +G ++   + L++M      P+  TYN      C + +++EA  ++Q +  K  
Sbjct: 396 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 455

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +     Y  +I+  CRKG+  +AFQ+  EM + G +PD+ TYSSLI+GLC    + EA +
Sbjct: 456 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 515

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   M +    PD   +  L+   C     + +L +   MI KG +P+  TY++L+ G+ 
Sbjct: 516 LSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLN 575

Query: 529 HQ 530
            Q
Sbjct: 576 KQ 577



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 251/496 (50%), Gaps = 19/496 (3%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F ++ER    G  P+VV    L+   CK  ++ +A  +++ M S G+ P+  SY  ++N 
Sbjct: 237 FGEMER---NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIING 293

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LC++G++  A +++E+M   G+  + VTYN+L+ G C  GN +Q+L     +++ G+ P+
Sbjct: 294 LCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPS 353

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+ +  K R ++ AM+  D +  +G +PN  +Y  L+ G  ++G   EA R   
Sbjct: 354 VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILN 413

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++   GF P+VV+YN  +   C+  R EEA  ++ EM     +P +V+Y+ +I      G
Sbjct: 414 EMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 473

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + D A ++  EMV+    P A +Y+ +I  LC   ++        +M      P+E TY 
Sbjct: 474 ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYT 533

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L    C  G + +A  +   + +K        Y  +I  L ++ +T +A +LL+++   
Sbjct: 534 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE 593

Query: 442 GFTPDSYTYSS---------------LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              P   TY +               LI+G CM+GL+ EA  +F  M E ++KP    +N
Sbjct: 594 ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYN 653

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ G C+      +  +++ MI  G +P+  T   L++ +  +   E  +EV+ +    
Sbjct: 654 VIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRS 713

Query: 547 QVVSESAVERLVMQYD 562
             ++E+ + +++++ +
Sbjct: 714 CRLNEAELAKVLVEIN 729



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 213/438 (48%), Gaps = 3/438 (0%)

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKK--AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           S G  P V+   ++L  + ++    K  A +V   M+ S + P+  +Y  L+   C  G 
Sbjct: 170 SSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGE 229

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +   +    +ME  G   N VTYN+L+   C +G ++++   L  +  KG+ PN  +Y+ 
Sbjct: 230 LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 289

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++    +E  +  A ++L+++  KG  P+ V+YN LL G CKEG   +A+    ++   G
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+VV+Y  L+ S+C       A E   +M      P   TY  LI   +  G  + A 
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAML 387
           ++L+EM +  F PS  +YN  I   C   +++  +  + +M  +   P+  +Y+  ++  
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G++  AF + Q +  K  S     Y  +I  LC   +  +A  L  EM   G  PD 
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 529

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           +TY++LI   C+EG + +AL +   M    + PD   ++ L+ GL K  RT  +  +   
Sbjct: 530 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFK 589

Query: 508 MIEKGQMPNETTYTILVE 525
           +I +  +P++ TY  L+E
Sbjct: 590 LIYEESVPSDVTYDTLIE 607



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 16/412 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + +A+  LE M  KG  PD V    LL   CK     +A+ +   MV +G+ P   
Sbjct: 296 REGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 355

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+N +CK  N+  AM+  ++M   G   N  TY +L+ G    G LN++ + L+ +
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G  P+  TY+  +        +  A+ ++ +++ KG  P++VSY+ +++G C++G  
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 475

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A +  +++  KG  P+ V+Y+ L++ LC   R  EA +L  EM      P   TY  L
Sbjct: 476 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 535

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G  + AL + DEM+   F P A +Y+ +I  L  + +     + L ++ +   
Sbjct: 536 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 595

Query: 375 KPNEGTYNGL-------------AML---CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
            P++ TY+ L             A++   C  G + EA  + +S+  + +   +  Y  +
Sbjct: 596 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 655

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           I   CR G   +AF L  EM   GF P + T  +LI+ L  EG+ EE  E+ 
Sbjct: 656 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 707



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 149/338 (44%), Gaps = 39/338 (11%)

Query: 255 EEAIRFFRDLPSKGFEPNVVS-------------------------------------YN 277
           ++A+       S GF P V+S                                     YN
Sbjct: 159 DQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYN 218

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
           IL+R  C  G  ++      EM+     P +VTYN LI +    G+ D A  +L  M   
Sbjct: 219 ILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK 278

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA 396
             +P+  SYN II  LC EG +    + L++M ++   P+E TYN L    C  G   +A
Sbjct: 279 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA 338

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             I   +     S     Y  +I S+C+     +A +   +M   G  P+  TY++LI G
Sbjct: 339 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 398

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
              +GL+ EA  I   M E  + P V  +NA + G C   R + +L V Q M+EKG  P+
Sbjct: 399 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 458

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             +Y+ ++ G   + EL+ + ++ +E+ + + VS  AV
Sbjct: 459 VVSYSTIISGFCRKGELDRAFQMKQEM-VEKGVSPDAV 495



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 124/271 (45%), Gaps = 38/271 (14%)

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI--------------------- 349
           +++++ S ++    D A+  ++      F P   SYN +                     
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 350 ----------------IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
                           I   CS G++   + C  +M    C PN  TYN L    C +G+
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + EAF +++S+ +K        Y  +I  LCR+G   +A+++L EM   GFTPD  TY++
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ G C EG   +AL I   M      P V  + AL+  +CK+R  + ++E F  M  +G
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             PNE TYT L++G + Q  L  +  +L E+
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 15/209 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           LN A    + M+ KG  PD V  + L+  L K  + ++A +++  ++    +P   +Y  
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 604

Query: 139 LV-NC--------------LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           L+ NC               C KG +  A ++ E M +  +      YN ++ G C  GN
Sbjct: 605 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 664

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L ++      +I  G VP+  T   L++A +KE       +++ D +            V
Sbjct: 665 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKV 724

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
           L+    KEG  E  +    D+   G  PN
Sbjct: 725 LVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 14/132 (10%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A    E MV + HKP       +++  C+   + KA  + + M+ SG +P   +   
Sbjct: 630 MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVIT 689

Query: 139 LVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNS--LVRGLCML----GNLNQSLQFL 191
           L+  L K+G       + E+M E  G    +   N   L + L  +    GN+   L  L
Sbjct: 690 LIKALFKEG-------MNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVL 742

Query: 192 DRLIQKGLVPNA 203
             + + GL+PN+
Sbjct: 743 TDMAKDGLLPNS 754


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 221/441 (50%), Gaps = 35/441 (7%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +L   CK  K++   K+ E M+ +GI PD   Y  L++   KKG V  A +L E+M   G
Sbjct: 14  VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              +  TYNSL+   C    + ++++    + +KG  P+  TYS ++    K   V  A+
Sbjct: 74  LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133

Query: 224 KLL-DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           ++L   +I +G   N V+YN L+ GLCK+   E A +   ++ SKG+ P+ ++YN +L  
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSG 193

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  G+  EA +    M     SP +V YN L+ +L   GKTD A+K+  +++   + P 
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPD 253

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
             +YN I+  L  +  +D   +   +M    C PN  TY+                    
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYS-------------------- 293

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
                          V++  CR  K   A ++L EM+K G  PD  TY+ L+ GLC   L
Sbjct: 294 --------------IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 339

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++A E+F  M +    PD+ +++ +L GLCK+ +   +  +F  MIE+  +P+  T+ I
Sbjct: 340 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 399

Query: 523 LVEGIAHQDELELSAEVLKEL 543
           L++G+    +L+ + ++L ++
Sbjct: 400 LMDGLCKAGKLDEAKDLLDQM 420



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 233/437 (53%), Gaps = 2/437 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL D +   E+M+  G  PD ++   L+    K  ++ +A ++ E MVS G+ P   +Y 
Sbjct: 23  KLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYN 82

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL-DRLIQ 196
            L+N  CK+  +  AM+L + M + G+  + VTY++++ GLC  G + ++L+ L  ++I+
Sbjct: 83  SLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIE 142

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G   N   Y+ L+    K+  +  A KLL+++ +KG  P+ ++YN +L+GLC+ G+  E
Sbjct: 143 RGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSE 202

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A +FF  +PS+G+ P+VV+YN LL +L  EG+ +EA +L  ++      P  VTYN ++ 
Sbjct: 203 AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILL 262

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            LA     D A ++  +MV     P+ A+Y+ +++  C   KVD   K L++M      P
Sbjct: 263 GLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP 322

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TYN  L  LC    V +A  +  ++ +   +     Y  V+  LC+  K + A  L 
Sbjct: 323 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLF 382

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M +    PD  T++ L+ GLC  G ++EA ++   M      PD   +N L+ GL K 
Sbjct: 383 DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQ 442

Query: 496 RRTDLSLEVFQMMIEKG 512
            R   +  + Q M EKG
Sbjct: 443 GRHIQADRLTQAMKEKG 459



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 217/413 (52%), Gaps = 2/413 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++++A    E MVS G +P +    +LL   CK  KMK+A+++ + M   G  
Sbjct: 51  DGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFE 110

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           PD  +Y+ +++ LCK G V  A++ L  KM + G   NTV YN+L+ GLC   N+ ++ +
Sbjct: 111 PDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYK 170

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L+ +  KG VP+  TY+ +L    +   V  A +  D + ++G  P++V+YN LL  L 
Sbjct: 171 LLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 230

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           KEG+T+EA++ F+D+ +KG+ P+ V+YN +L  L  +   +EA E+  +M     +P   
Sbjct: 231 KEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY+I++       K D A KVL+EM K    P   +YN ++  LC    VD   +    M
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350

Query: 370 FHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
               C P+  +Y+  L  LC   KV +A  +   +  ++       +  ++  LC+ GK 
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            +A  LL +MT  G  PD   Y++L+ GL  +G   +A  +   M+E  +  D
Sbjct: 411 DEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 201/376 (53%), Gaps = 2/376 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDA 133
           ++ K+ +A    + M  KG +PDVV  + ++  LCK  K+ +A++++   M+  G   + 
Sbjct: 90  KETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANT 149

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  L+N LCK  N+  A +L+E+M   GY  + +TYN+++ GLC +G ++++ QF D 
Sbjct: 150 VAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDS 209

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  +G  P+   Y+ LL+A YKE     AMKL  D+IAKG  P+ V+YN +L GL ++  
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EA   F+ + + G  PN  +Y+I+L   C   + ++A+++L EM      P +VTYNI
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L      D A ++   MV     P   SY+ ++  LC   KV       D+M  R+
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 389

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P+  T+N L   LC  GK+ EA  ++  +     +     Y  ++  L ++G+  QA 
Sbjct: 390 LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQAD 449

Query: 433 QLLYEMTKYGFTPDSY 448
           +L   M + GF  D +
Sbjct: 450 RLTQAMKEKGFLSDCF 465



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 192/345 (55%), Gaps = 2/345 (0%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN +T+  +L++  K+  +    KL + ++  G  P+ + YN+L+ G  K+GR +EA R 
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           + ++ S G EP++ +YN LL + C E + +EA EL   M      P +VTY+ +I  L  
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 321 HGKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
            GK   AL++L  +M++     +  +YN +I  LC +  ++   K L++M  +   P+  
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 380 TYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TYN  L+ LC +GKV EA     S+ ++  S     Y  ++ +L ++GKT +A +L  ++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G+ PD+ TY+S++ GL  +  ++EA E+F  M      P+   ++ +L G C++++ 
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           D + +V + M + G +P+  TY IL++G+   + ++ + E+   +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 154/292 (52%), Gaps = 2/292 (0%)

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           PN  ++ ++L+S C +G+  +  +L  +M     SP  + YNILI   A  G+ D A ++
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCG 389
            +EMV     PS  +YN ++   C E K+   ++    M  +  +P+  TY+ + + LC 
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 390 VGKVQEAFAII-QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
            GKV EA  ++   +  +  S+    Y  +I  LC+     +A++LL EM   G+ PD+ 
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY++++ GLC  G + EA + F  M    Y PDV  +N LL  L K  +TD ++++F+ +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           I KG MP+  TY  ++ G+A +  ++ + E+ K++         A   +V+ 
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLS 297



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/100 (23%), Positives = 51/100 (51%)

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           +P+ YT+  +++  C +G + +  ++F  M +    PD   +N L+ G  K  R D +  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +++ M+  G  P+  TY  L+     + +++ + E+ K +
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTM 104


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 228/446 (51%), Gaps = 1/446 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+Y  C  NK+ +AI ++  M      PD  SY  +++ LCKKG +  A  L+  M++ G
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  T+N LV G C LG L ++ Q +D + Q  ++P+ +TY+ L+    K+  +  A 
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L D++      P++V+YN L+ G      + +       +  KG +PN V+YN++++  
Sbjct: 338 RLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWY 397

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             EG+ + A   L +M+    SP  VT+N LI      G+   A +++DEM +   + ++
Sbjct: 398 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
            + N I+  LC E K+D   K L     R    +E +Y  L M     GK  EA  +   
Sbjct: 458 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDE 517

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  K+       Y  +I  LC  GKT Q+   L E+ + G  PD  TY+++I G C EG 
Sbjct: 518 MKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQ 577

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +E+A +    M +  +KPD+   N LL GLC     D +L++F   I KG+  +  TY  
Sbjct: 578 VEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNT 637

Query: 523 LVEGIAHQDELELSAEVLKELQLRQV 548
           ++ G+  +D  E + ++L E++ +++
Sbjct: 638 IISGLCKEDRFEEAFDLLAEMEEKKL 663



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 231/450 (51%), Gaps = 3/450 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  KLN+A   L  M + G  P+      L+   CK   +K+A +V+++M  + ++
Sbjct: 255 DVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVL 314

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+  LCK G +  A +L ++ME+     + VTYN+L+ G     +  +  + 
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFEL 374

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D++  KG+ PNA TY+ +++   KE  +  A   L  +   G  P+ V++N L+ G CK
Sbjct: 375 IDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK 434

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA R   ++  KG + N V+ N +L +LC E + ++A +LL+           V+
Sbjct: 435 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 494

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI      GK+  A+K+ DEM +    PS  +YN +I  LC  GK D  +  L+++ 
Sbjct: 495 YGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL 554

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY-KYVITSLCRKGKT 428
                P+E TYN + +  C  G+V++AF     +  K++  P  F    ++  LC +G  
Sbjct: 555 ESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMV-KKSFKPDLFTCNILLRGLCTEGML 613

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A +L       G   D+ TY+++I GLC E   EEA ++   MEE    PD   +NA+
Sbjct: 614 DKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAI 673

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
           L  L  + R   + E    ++E+G++ ++T
Sbjct: 674 LSALADAGRMKEAEEFMSRIVEQGKLQDQT 703



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 231/469 (49%), Gaps = 1/469 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           ++KL++A   + +M      PD V    +L  LCK  K+ +A  ++  M ++G++P+ ++
Sbjct: 225 ENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNT 284

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  LV+  CK G +  A Q+++ M       +  TYN L+ GLC  G ++++ +  D + 
Sbjct: 285 FNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEME 344

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              L+P+  TY+ L+   +         +L+D +  KG KPN V+YNV++    KEG+ +
Sbjct: 345 NLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMD 404

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A    R +   GF P+ V++N L+   C  GR  EA  ++ EM         VT N ++
Sbjct: 405 NAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 464

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            +L    K D A K+L    K  +     SY  +I     +GK    +K  D+M  +   
Sbjct: 465 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEII 524

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  TYN +   LC  GK  ++   +  L        +  Y  +I   CR+G+  +AFQ 
Sbjct: 525 PSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQF 584

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M K  F PD +T + L+RGLC EG++++AL++F          D   +N ++ GLCK
Sbjct: 585 HNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCK 644

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             R + + ++   M EK   P+  TY  ++  +A    ++ + E +  +
Sbjct: 645 EDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRI 693



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/476 (24%), Positives = 221/476 (46%), Gaps = 57/476 (11%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+++AF   + M +    PDVV    L+      +   K  ++++ M   G+ P+A 
Sbjct: 329 KDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAV 388

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V    K+G +  A   + KME+ G+  + VT+N+L+ G C  G L+++ + +D +
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM 448

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KGL  N+ T + +L     ER +  A KLL     +G   + VSY  L+ G  K+G++
Sbjct: 449 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKS 508

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA++ + ++  K   P++++YN ++  LC  G+ +++ + L E+      P   TYN +
Sbjct: 509 VEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTI 568

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G+ + A +  ++MVK  F+P   + N ++  LC+EG +D  +K  +    +  
Sbjct: 569 ILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGK 628

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             +  TYN +                                  I+ LC++ +  +AF L
Sbjct: 629 AIDAVTYNTI----------------------------------ISGLCKEDRFEEAFDL 654

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE------------------- 475
           L EM +    PD YTY++++  L   G ++EA E    + E                   
Sbjct: 655 LAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESS 714

Query: 476 ----YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
                +  P+   F+  +  LC   +   ++ + Q   +KG   +++TY  L+EG+
Sbjct: 715 SETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGL 770



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
           F+ +  LG K N++    +  +I   C + K  +A  L+ +M  +   PD+ +Y++++  
Sbjct: 200 FSDVIKLGVKVNTNT---FNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDV 256

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           LC +G + EA ++ + M+     P+ + FN L+ G CK      + +V  +M +   +P+
Sbjct: 257 LCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPD 316

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQ 544
             TY +L+ G+    +++ +  +  E++
Sbjct: 317 VWTYNMLIGGLCKDGKIDEAFRLKDEME 344



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 3/126 (2%)

Query: 418 VITSLCR---KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +I +L R   K   Y +  +  ++ K G   ++ T++ LI G C+E  + EA+ +   M+
Sbjct: 180 LINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMK 239

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           ++   PD  ++N +L  LCK  + + + ++   M   G +PN  T+ ILV G      L+
Sbjct: 240 DFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLK 299

Query: 535 LSAEVL 540
            +A+V+
Sbjct: 300 EAAQVI 305


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 238/475 (50%), Gaps = 1/475 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M S G   DV     ++   C  N++     V+  +   G  PD +++T L+  LC +
Sbjct: 98  KQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVE 157

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +G A+ L +KM   G+  N VTY +L+ GLC +GN   +++ L  ++QK   PN  TY
Sbjct: 158 GKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITY 217

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + +++  +K+R V+ A+ +  ++IAKG  PN+ +YN ++ GLCK    +       ++  
Sbjct: 218 NTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD 277

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               PNVV +  L+ +LC EG    A++++  M      P +VTY  L+       + D 
Sbjct: 278 SKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDE 337

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A KV D MV+    P+  SY+ +I   C   ++D  +   ++M  R   PN  TYN L  
Sbjct: 338 ADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIH 397

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC VG++++A A+   +           Y+ ++  LC+     QA  +L  +      P
Sbjct: 398 GLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAP 457

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  +Y+ +I G+C  G +E A ++F  +      PDV  +  ++ GLC       + ++F
Sbjct: 458 DIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLF 517

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           + M   G  P++ TY ++  G    +E   + ++L+E+  R   ++++   L+++
Sbjct: 518 REMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 227/466 (48%), Gaps = 1/466 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A     RM+     P VV    +L  +         + + + M S GI  D  +   
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N  C    V +   ++ K+   G+  +T T+ +L+RGLC+ G + ++L   D+++ +G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K     AA++LL  ++ K  +PN+++YN ++  L K+ +  EA+
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG  PNV +YN ++  LC    W+    L+ EM      P +V +  L+ +L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A  V+D M++    P   +Y  ++   C   ++D   K  D M  + C PN 
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +Y+ L    C + ++ +A  + + +  ++       Y  +I  LC  G+   A  L +E
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TY  L+  LC    +++A+ +   +E  +  PD+ ++N ++ G+C+   
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + + ++F  +  KG  P+  TYTI++ G+  Q  L  + ++ +E+
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREM 520



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 225/467 (48%), Gaps = 36/467 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    ++MV +G +P+ V    L++ LCK    + AI+++  MV     P+  +Y 
Sbjct: 159 KIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYN 218

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++CL K   V  A+ +  +M   G   N  TYNS++ GLC           ++ ++  
Sbjct: 219 TIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS 278

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++PN   ++ L++A  KE  V  A  ++D +I +G +P++V+Y  L+ G C     +EA
Sbjct: 279 KIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEA 338

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F  +  KG  PNV+SY+ L+   C   R ++A  L  EM   +  P IVTYN LI  
Sbjct: 339 DKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHG 398

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L + G+   A+ +  EMV     P   +Y  ++  LC    +D                 
Sbjct: 399 LCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLD----------------- 441

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                            +A A+++++     +   + Y  VI  +CR G+   A  L   
Sbjct: 442 -----------------QAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSS 484

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           ++  G  PD +TY+ +I GLC++GL+ EA ++F  M      PD   +N +  G  ++  
Sbjct: 485 LSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNE 544

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA-EVLKEL 543
           T  ++++ Q M+ +G   + +T T++VE ++  D L+ S  ++L E 
Sbjct: 545 TLSAIQLLQEMLGRGFSADASTITLIVEMLS-DDGLDQSVKQILHEF 590



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 194/400 (48%), Gaps = 34/400 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D ++N+A      M++KG  P+V    ++++ LCK ++ K    +M  MV S I+
Sbjct: 222 DCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIM 281

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   +T LV+ LCK+G V  A  +V+ M   G   + VTY +L+ G C+   ++++ + 
Sbjct: 282 PNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKV 341

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +++KG  PN  +YS L+    K + +  AM L +++  +   PN+V+YN L+ GLC 
Sbjct: 342 FDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCH 401

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  +AI  F ++ + G  P++V+Y ILL  LC     ++A  +L  ++G + +P I +
Sbjct: 402 VGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQS 461

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI+I  +   G+ + A  +   +      P   +Y  +I  LC +G +    K   +M 
Sbjct: 462 YNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMN 521

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C P++ TYN                                   +     R  +T  
Sbjct: 522 TDGCSPDDCTYN----------------------------------LITRGFLRNNETLS 547

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           A QLL EM   GF+ D+ T + ++  L  +GL +   +I 
Sbjct: 548 AIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 205/433 (47%), Gaps = 1/433 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N + +A+     M+     P    +  ++  +    +    + L ++M+  G P++  T 
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
             ++   C L  ++     L ++ + G  P+  T++ L+     E  +  A+ L D ++ 
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G +PN V+Y  L+ GLCK G +  AIR  R +  K  EPNV++YN ++  L  + +  E
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  + +EM     SP + TYN +I  L    +  H   +++EMV  +  P+   +  ++ 
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC EG V +    +D M  R  +P+  TY  L    C   ++ EA  +  ++  K  + 
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+  +  +A  L  EM +    P+  TY++LI GLC  G + +A+ +F
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M      PD+  +  LL  LCK+R  D ++ + + +      P+  +Y I+++G+   
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRV 472

Query: 531 DELELSAEVLKEL 543
            ELE + ++   L
Sbjct: 473 GELEAAGDLFSSL 485



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 178/397 (44%), Gaps = 34/397 (8%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P + V +  ++  +  + + +  L    ++   G+  + +T + ++ +      V     
Sbjct: 71  PPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFS 130

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +L  I   G +P+  ++  L+ GLC EG+  EA+  F  +  +GF+PN V+Y  L+  LC
Sbjct: 131 VLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLC 190

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G    A  LL  M   +  P ++TYN +I  L    + + AL +  EM+     P+ +
Sbjct: 191 KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVS 250

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLG 404
           +YN II  LC   +   V   +++M   +  PN   +  L                    
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL-------------------- 290

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                         + +LC++G    A  ++  M + G  PD  TY++L+ G C+   ++
Sbjct: 291 --------------VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMD 336

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA ++F  M      P+V +++ L+ G CK +R D ++ +F+ M ++  +PN  TY  L+
Sbjct: 337 EADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLI 396

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            G+ H   L  +  +  E+     + +    R+++ Y
Sbjct: 397 HGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDY 433


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 151/477 (31%), Positives = 249/477 (52%), Gaps = 14/477 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + H+L  A L LE M + G +PD    T L+    +   ++ A+++ E+MV SG    + 
Sbjct: 211 KAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSV 270

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S   LVN LCK+G +  A++ +   E+ G+  + VT+N+LV GLC  G++ Q L+ +D +
Sbjct: 271 SVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFM 328

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG   + +TY+ L+    K   +  A+++L  ++++  +PN V+YN L+  LCKE   
Sbjct: 329 LEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHV 388

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A    R L SKG  P+V ++N L++ LC+    E A EL  EM      P   TY+IL
Sbjct: 389 EAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSIL 448

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL    +   AL +L EM       +   YN +I  LC   +V       DQM     
Sbjct: 449 IESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGV 508

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
             +  TYN L   LC   +V+EA  ++  +   +   P +F Y  ++   C++G   +A 
Sbjct: 509 SRSSVTYNTLINGLCKSKRVEEAAQLMDQM-IMEGLKPDKFTYTTMLKYFCQQGDIKRAA 567

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLL 490
            ++  MT  G  PD  TY +LI GLC  G ++ A ++   V M+     P    +N ++ 
Sbjct: 568 DIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQA--YNPVIQ 625

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH-----QDELELSAEVLKE 542
            LCK +RT  ++ +F+ M+EKG  P+  TY I+  G+ +     Q+ ++ + E+L++
Sbjct: 626 ALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK 682



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 210/449 (46%), Gaps = 35/449 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +      ++ M+ KG + DV    +L+  LCK  ++ +A++++  MVS    P+  
Sbjct: 314 RTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTV 373

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+  LCK+ +V  A +L   +   G   +  T+NSL++GLC+  N   +++  + +
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG  P+ FTYS L+E+   ER +  A+ LL ++   G   N+V YN L+ GLCK  R 
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRV 493

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A   F  +   G   + V+YN L+  LC   R EEA +L+ +M      P   TY  +
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G    A  ++  M      P   +Y  +I  LC  G+VD+  K L  +     
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSV----- 608

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                   G+ +                       +PQ  Y  VI +LC++ +T +A +L
Sbjct: 609 -----QMKGMVL-----------------------TPQA-YNPVIQALCKRKRTKEAMRL 639

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
             EM + G  PD  TY  + RGLC   G I+EA++  V M E    P+  +F  L  GLC
Sbjct: 640 FREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC 699

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
                D  +++  M++EKG+     T  I
Sbjct: 700 SLSMEDTLIQLINMVMEKGRFSQSETSII 728



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 237/479 (49%), Gaps = 5/479 (1%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           + H   ++N  FL +ER  +   KPD       L  L KANK+K    +   MV+  + P
Sbjct: 140 SHHLHAEINPLFLLMERDFAV--KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPP 197

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D S++  L+  LCK   +  A+ ++E M +YG   +  T+ +L++G     ++  +L+  
Sbjct: 198 DVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIK 257

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           + +++ G    + + + L+    KE  +  A++ + +   +G  P+ V++N L+ GLC+ 
Sbjct: 258 ELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRT 315

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  ++ +     +  KGFE +V +YN L+  LC  G  +EA E+L  M   D  P  VTY
Sbjct: 316 GHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N LIG+L      + A ++   +      P   ++N +I  LC     ++ ++  ++M  
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE 435

Query: 372 RRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           + C P+E TY+ L   LC   +++EA  +++ +     +     Y  +I  LC+  +   
Sbjct: 436 KGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGD 495

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  +  +M   G +  S TY++LI GLC    +EEA ++   M     KPD   +  +L 
Sbjct: 496 AEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLK 555

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             C+      + ++ Q M   G  P+  TY  L+ G+     +++++++L+ +Q++ +V
Sbjct: 556 YFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMV 614



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 208/445 (46%), Gaps = 9/445 (2%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ----LVEKM 159
           LL  L +A      + ++  M SS I  D S++   +       ++   +     L+E+ 
Sbjct: 98  LLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMER- 156

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
            D+    +T  YN  +  L     L        +++   + P+  T++ L+ A  K   +
Sbjct: 157 -DFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQL 215

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A+ +L+D+   G +P+  ++  L+ G  +E   E A+R    +   G E   VS N+L
Sbjct: 216 RPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVL 275

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +  LC EGR EEA   + E +G    P  VT+N L+  L   G     L+++D M++  F
Sbjct: 276 VNGLCKEGRIEEALRFIYEEEGF--CPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGF 333

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFA 398
                +YN +I+ LC  G++D  V+ L  M  R C+PN  TYN L   LC    V+ A  
Sbjct: 334 ELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATE 393

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           + + L +K        +  +I  LC       A +L  EM + G  PD +TYS LI  LC
Sbjct: 394 LARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLC 453

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            E  ++EAL +   ME      +V  +N L+ GLCK+ R   + ++F  M   G   +  
Sbjct: 454 SERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSV 513

Query: 519 TYTILVEGIAHQDELELSAEVLKEL 543
           TY  L+ G+     +E +A+++ ++
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLMDQM 538



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 179/382 (46%), Gaps = 4/382 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A   L  MVS+  +P+ V    L+  LCK N ++ A ++  ++ S G++PD  ++ 
Sbjct: 352 EIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFN 411

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC   N   AM+L E+M++ G   +  TY+ L+  LC    L ++L  L  +   
Sbjct: 412 SLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELS 471

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   N   Y+ L++   K   V  A  + D +   G   + V+YN L+ GLCK  R EEA
Sbjct: 472 GCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEA 531

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +    +  +G +P+  +Y  +L+  C +G  + A +++  M      P IVTY  LIG 
Sbjct: 532 AQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGG 591

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D A K+L  +       +  +YNP+I  LC   +    ++   +M  +   P+
Sbjct: 592 LCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPD 651

Query: 378 EGTYNGLAM-LC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
             TY  +   LC G G +QEA      +  K        + ++   LC         QL+
Sbjct: 652 VITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLI 711

Query: 436 YEMTKYGFTPDSYTYSSLIRGL 457
             + + G    S T  S+IRG 
Sbjct: 712 NMVMEKGRFSQSET--SIIRGF 731



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 209/422 (49%), Gaps = 10/422 (2%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY-GYPTNTVTYNSLVRGLCMLGNLNQSL 188
           +P   S + L++ L ++ +   A+ L +       Y  +   ++ L+R L   G+ +  L
Sbjct: 53  LPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSML 112

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK--GGKPNLVSYNVLLT 246
             L ++    +  +  T+   LE       +HA +  L  ++ +    KP+   YNV L+
Sbjct: 113 TLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALS 172

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            L K  + +        + +    P+V ++NIL+R+LC   +   A  +L +M      P
Sbjct: 173 LLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRP 232

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
              T+  L+         + AL++ + MV+     ++ S N ++  LC EG+++  ++ +
Sbjct: 233 DEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI 292

Query: 367 --DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
             ++ F   C P++ T+N L   LC  G +++   ++  +  K        Y  +I+ LC
Sbjct: 293 YEEEGF---C-PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + G+  +A ++L+ M      P++ TY++LI  LC E  +E A E+  V+      PDV 
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            FN+L+ GLC +   ++++E+F+ M EKG  P+E TY+IL+E +  +  L+ +  +LKE+
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468

Query: 544 QL 545
           +L
Sbjct: 469 EL 470



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 197/424 (46%), Gaps = 6/424 (1%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           S +  L+  L + G+    + L+ +M     P +  T+   +       +L+  +  L  
Sbjct: 93  SVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFL 152

Query: 194 LIQKGLV--PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           L+++     P+   Y+  L    K   +     L   ++A    P++ ++N+L+  LCK 
Sbjct: 153 LMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKA 212

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            +   AI    D+P+ G  P+  ++  L++    E   E A  +   M       T V+ 
Sbjct: 213 HQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSV 272

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N+L+  L   G+ + AL+ + E  +  F P   ++N ++  LC  G +   ++ +D M  
Sbjct: 273 NVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLE 330

Query: 372 RRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +  + +  TYN L + LC +G++ EA  I+  + ++        Y  +I +LC++     
Sbjct: 331 KGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEA 390

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L   +T  G  PD  T++SLI+GLC+    E A+E+F  M+E    PD   ++ L+ 
Sbjct: 391 ATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIE 450

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
            LC  RR   +L + + M   G   N   Y  L++G+   + +  + ++  ++++   VS
Sbjct: 451 SLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLG-VS 509

Query: 551 ESAV 554
            S+V
Sbjct: 510 RSSV 513


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 239/461 (51%), Gaps = 17/461 (3%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P +    +LL  L K     +   +   M  SG+  D  +   L+NCLC    +      
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
              +   GY  N VTYN+L++GLCM   ++++ +   R+ + G  P+  TY  L++    
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 216 ERGVHAAMKL----LDDI--IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
              ++ A+KL    L+DI       KPN+++YN+++ GLCK GR +EA + F ++ ++G 
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            P+++SYN L+   C  G+WEE+  LL EM      P +VT+N+LI +L   GK   A K
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
           +L  M++    P   +YN +I   C  G ++   +    M  + C+P+  +YN   ++ G
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN--VLING 364

Query: 390 VGK---VQEAFAIIQSL---GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
             K   V+EA  +   +   G + N      Y  ++  +   GK   A +L   M  +G 
Sbjct: 365 YSKTLKVEEAMKLYNEMLLVGKRPNVIT---YDSLLKGIFLAGKVDDAKKLFSVMKAHGI 421

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             +SYTY   + GLC    + EA+++F  ++  ++K +++N N L+ GLCK+ + + + E
Sbjct: 422 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 481

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +F+ +  +G  PN  TYTI++ G   + +++ +  ++++++
Sbjct: 482 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKME 522



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 242/482 (50%), Gaps = 7/482 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++L + F     ++ +G+ P++V    L+  LC  +++ +A ++   M   G  PD  +Y
Sbjct: 118 NRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTY 177

Query: 137 TYLVNCLCKKGNVGYAMQLVEKM------EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
             L+  LC  GN+  A++L ++M       +     N +TYN +V GLC +G  +++ Q 
Sbjct: 178 GTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQL 237

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +  +G++P+  +Y+ L+           + +LLD+++ +G +P++V++NVL+  LCK
Sbjct: 238 FEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCK 297

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG+  EA +    +   G  P++V+YN L+   CM G    A EL   M      P +++
Sbjct: 298 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS 357

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN+LI   +   K + A+K+ +EM+    RP+  +Y+ ++  +   GKVD   K    M 
Sbjct: 358 YNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 417

Query: 371 HRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 N  TY   L  LC    + EA  +   L +       E    +I  LC+ GK  
Sbjct: 418 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 477

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A++L  +++  G  P+  TY+ +I G C EG +++A  +   ME     PD+  +N L+
Sbjct: 478 TAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLM 537

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            G  +S + +  +++   M +K   P+  T +I+V+ ++  ++ +    +L    +++ V
Sbjct: 538 RGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 597

Query: 550 SE 551
            +
Sbjct: 598 DK 599



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 206/413 (49%), Gaps = 7/413 (1%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS------GI 129
           +H++++A     RM   G  PDVV    L+  LC    +  A+K+ + M++         
Sbjct: 152 EHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINC 211

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  +Y  +V+ LCK G    A QL E+M+  G   + ++YNSL+ G C  G   +S +
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            LD ++ +GL P+  T++ L++   KE  V  A KLL  +I  G  P+LV+YN L+ G C
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
             G    A   F  +PSKG EP+V+SYN+L+       + EEA +L  EM    + P ++
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 391

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY+ L+  +   GK D A K+   M       ++ +Y   +  LC    +   +K   ++
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 451

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                K      N L   LC  GK++ A+ + + L N+ +      Y  +I   CR+G+ 
Sbjct: 452 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 511

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            +A  L+ +M   G TPD  TY++L+RG      +EE +++   M + D  PD
Sbjct: 512 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 181/358 (50%), Gaps = 9/358 (2%)

Query: 179 CMLGNLN--QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           C  GN+    +L F   +++    P+  +++ LL    K +       L + +   G   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +  + N+LL  LC   R  E    F  +  +G+ PN+V+YN L++ LCME R  EA  L 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK--GRF----RPSAASYNPII 350
             M     +P +VTY  LI  L   G  + ALK+  EM+    R+    +P+  +YN I+
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
             LC  G+ D   +  ++M  +   P+  +YN L    C  GK +E+  ++  + ++   
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                +  +I +LC++GK  +A +LL  M + G  PD  TY+SLI G CM G +  A E+
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           FV M     +PDV ++N L+ G  K+ + + +++++  M+  G+ PN  TY  L++GI
Sbjct: 343 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 400



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 147/288 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++ K+ +A   L  M+  G  PD+V   +L+   C    +  A ++   M S G  
Sbjct: 293 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 352

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SY  L+N   K   V  AM+L  +M   G   N +TY+SL++G+ + G ++ + + 
Sbjct: 353 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 412

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G+  N++TY   L+   K   +  AMKL  ++ +   K  + + N L+ GLCK
Sbjct: 413 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 472

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E A   F  L ++G EPNVV+Y I++   C EG+ ++AN L+ +M+    +P I+T
Sbjct: 473 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 532

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           YN L+       K +  +++L  M +    P A + + ++  L  + K
Sbjct: 533 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 580



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 156/352 (44%), Gaps = 7/352 (1%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN     FL            A+     ++     P+L S+N LL+GL K     +    
Sbjct: 32  PNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSL 91

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           +  +   G   +  + NILL  LC   R  E     A +     SP IVTYN LI  L  
Sbjct: 92  YNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCM 151

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM------FHRRC 374
             +   A ++   M K    P   +Y  +I  LC  G +++ +K   +M      +   C
Sbjct: 152 EHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINC 211

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPN  TYN +   LC VG+  EA  + + +  +        Y  +I   C  GK  ++ +
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM   G  PD  T++ LI  LC EG + EA ++  VM E    PD+  +N+L+ G C
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
                + + E+F  M  KG  P+  +Y +L+ G +   ++E + ++  E+ L
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL 383



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 97/198 (48%), Gaps = 1/198 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++DA      M + G   +       L  LCK + + +A+K+   + SS    +  +  
Sbjct: 405 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 464

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G +  A +L EK+ + G+  N VTY  ++ G C  G ++++   + ++   
Sbjct: 465 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 524

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  TY+ L+   Y+   +   ++LL  +  K   P+ ++ ++++  L K+ + +E 
Sbjct: 525 GCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQEC 584

Query: 258 IRFFRDLP-SKGFEPNVV 274
           +      P  KG + +++
Sbjct: 585 LHLLPRFPIQKGVDKHLL 602


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 243/509 (47%), Gaps = 40/509 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP-DA 133
           R  + +DA    E M  K  KPD+     L+  LCKA   +KA +V   M++ G +P D 
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           + +T +V  L K   V  A ++  +ME  G+P + + YN+++ GL   G+  ++L+ LD 
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ K  VP   TY  L+ +  K   +  A +L   + A G +PN V Y  L+ G  K GR
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EA   F ++   G+ P+V+++ +++  LC  G +E+A +   EM  G   P +VTY  
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L+  G+  +A +++  M+     P + +Y  ++   C  G++D   + LD++    
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465

Query: 374 CKPNEGTY----NGLA---------------------------------MLCGVGKVQEA 396
             PN   Y    NGL                                   LC  G++ EA
Sbjct: 466 SSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEA 525

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLC--RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
             I Q + ++        Y  +I  LC  R+ +  +AF LL+++ K G+ PD+ TY+ L 
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLC 585

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC  G ++ A+++        +  DV  + AL  GLC   + D ++ +FQ M+ +G  
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
           P+   Y  ++ G+    +LE + +   E+
Sbjct: 646 PDAAAYCCIINGLIKVKKLEDACKFFDEM 674



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 234/468 (50%), Gaps = 15/468 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  + F Q+E+    G  PD +    ++  L KA   ++A+KV++ M++   +P   
Sbjct: 240 RVKEAREVFGQMEKC---GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEV 296

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  LVN LCK G +  A +L   M   G+  N+V Y SL+ G    G + ++    D +
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  T++ +++   K      A K  ++++  G KPN+V+Y  ++ GL K GR 
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A R  + + + G  P+ V+Y  LL   C  GR +EA +LL E+D    SP +  Y+ L
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP-----IIARLCSEGKVDLVVKCLDQM 369
           +  L   G  +   K LD++ + + + +A + +P     II  LC  G++D   +   +M
Sbjct: 477 VNGLCDGGSVE---KTLDDLFE-QSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532

Query: 370 FHRRCKPNEGTYNGLA-MLCGV--GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
               CKP+  TYN L   LC     +V+ AFA++  L           Y  +   LC+ G
Sbjct: 533 VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIG 592

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A ++L E +  G+  D   Y++L  GLC +G ++ A+ +F  M      PD   + 
Sbjct: 593 EVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYC 652

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            ++ GL K ++ + + + F  MI KGQ P   TYT LV+ + H   ++
Sbjct: 653 CIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVD 700



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 226/466 (48%), Gaps = 7/466 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M+  G  P+      L+    +  +   A+   E+M      PD  ++  LV+CLCK 
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202

Query: 147 GNVGYAMQLVEKMEDYGY-PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           G    A ++  +M   G+ P +   + ++VR L     + ++ +   ++ + G  P+A  
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++   K      A+K+LD+++AK   P  V+Y +L+  LCK G  E A   FR + 
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + GF PN V Y  L+      GR +EA  L  EM      P ++T+ ++I  L   G  +
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A K  +EM++G  +P+  +Y  II  L   G+V    + +  M    C P+  TY  L 
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C +G++ EA  ++  L +K +SSP  + Y  ++  LC  G   +    L+E +K   
Sbjct: 443 DGFCKLGRLDEAAQLLDEL-DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAA 501

Query: 444 -TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR--RTDL 500
            T D     S+I GLC  G ++EA  IF  M     KPD   +N L+ GLC+SR  R + 
Sbjct: 502 ETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVER 561

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +  +   + + G +P+  TYT L  G+    E++ + ++L+E   R
Sbjct: 562 AFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR 607



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 228/480 (47%), Gaps = 24/480 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A    + MV  G++PDV+  T ++  LCK+   ++A K  E M+  G  P+  +YT
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  L K G V  A ++++ M  +G   ++VTY  L+ G C LG L+++ Q LD L + 
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII------AKGGKPNLVSYNVLLTGLCKE 251
              PN   YS L+        V    K LDD+       A+   P L     ++ GLCK 
Sbjct: 465 SSSPNLQLYSSLVNGLCDGGSVE---KTLDDLFEQSKAAAETLDPGLCCS--IIVGLCKT 519

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM--EGRWEEANELLAEMDGGDRSPTIV 309
           GR +EA R F+ + S+G +P+  +YNIL+  LC   E R E A  LL +++     P  V
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAV 579

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  L   L   G+ D A+K+L+E     +     +Y  +   LC +G+VD  V    +M
Sbjct: 580 TYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM 639

Query: 370 FHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             +   P+   Y    NGL     V K+++A      +  K        Y  ++ +LC  
Sbjct: 640 VRQGGAPDAAAYCCIINGLIK---VKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHA 696

Query: 426 GKTYQAFQLLYEMTKYG-FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           G   +AF     M   G        Y +LI G C    ++ AL++F  M      P    
Sbjct: 697 GNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVT 756

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             +L  GL +S +T+ + E+ Q M   G  P+  T+T +++G+   DE   S ++LK +Q
Sbjct: 757 SASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDE---SGKLLKLVQ 813



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 209/458 (45%), Gaps = 40/458 (8%)

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG--------- 177
           +G   D  +Y  L+N L  + N      + E+M   G   NT ++N L+R          
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172

Query: 178 --------------------------LCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLL 210
                                     LC  G   ++ +    ++  G V P+   ++ ++
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
               K + V  A ++   +   G  P+ ++YN ++ GL K G  +EA++   ++ +K   
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P  V+Y IL+ SLC  G  E A EL   M      P  V Y  LI   A  G+   A  +
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
            DEMV+  +RP   ++  +I  LC  G  +   K  ++M    CKPN  TY  +   L  
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           +G+V  AF I++ +           Y  ++   C+ G+  +A QLL E+ K   +P+   
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472

Query: 450 YSSLIRGLCMEGLIEEAL-EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           YSSL+ GLC  G +E+ L ++F   +      D     ++++GLCK+ R D +  +FQ M
Sbjct: 473 YSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532

Query: 509 IEKGQMPNETTYTILVEGI--AHQDELELSAEVLKELQ 544
           + +G  P+ TTY IL+ G+  + ++ +E +  +L +L+
Sbjct: 533 VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 178/385 (46%), Gaps = 35/385 (9%)

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
           E  G+  +  TYN L+  L    N +Q     + +++ G+ PN F+++ L+ +  + R  
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF-EPNVVSYNI 278
             A+   + +  K  KP+L ++ +L+  LCK G  E+A   F ++ + GF  P+   +  
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++R+L    R +EA E+  +M+     P  + YN +I  LA  G    ALKVLD M+   
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFA 398
             P+  +Y  ++  LC  G ++                               + +E F 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLE-------------------------------RAEELFR 319

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           ++ + G + NS     Y  +I    + G+  +A  L  EM + G+ PD  T++ +I GLC
Sbjct: 320 VMAASGFRPNSV---IYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G  E+A + F  M     KP+V  +  ++ GL K  R   +  + + MI  G  P+  
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436

Query: 519 TYTILVEGIAHQDELELSAEVLKEL 543
           TY  L++G      L+ +A++L EL
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDEL 461



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 1/266 (0%)

Query: 69  NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG 128
           N   R R++++  AF  L  +   G+ PD V  T L   LCK  ++ +A+K++E   S G
Sbjct: 549 NGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
              D  +YT L   LC +G V  A+ L ++M   G   +   Y  ++ GL  +  L  + 
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDAC 668

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTG 247
           +F D +I KG  P   TY+ L++A      V  A    + ++A+G    +++ Y+ L+ G
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHG 728

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK  + + A++ F D+ S+G  P  V+   L   L   G+ E+A ELL EM  G   P 
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDE 333
             T+  ++  L    ++   LK++ E
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQE 814



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 4/173 (2%)

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           TYN L  +L       + +AI + +  K   +P  F +  +I S  R  +   A      
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEM-LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEI 179

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY-KPDVDNFNALLLGLCKSR 496
           M +    PD +T+  L+  LC  G+ E+A E+F  M    +  PD     A++  L K++
Sbjct: 180 MKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK 239

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           R   + EVF  M + G  P+   Y  +++G+A     + + +VL  +  +  V
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 2/126 (1%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           V+ SL   G     F+   E  + GF  D +TY+ L+  L  E    +   I   M +  
Sbjct: 92  VLRSLKVTGTAISFFRWAGE--QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAG 149

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             P+  +FN L+    ++RR D ++  F++M  K   P+  T+ ILV+ +      E + 
Sbjct: 150 IAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAF 209

Query: 538 EVLKEL 543
           EV  E+
Sbjct: 210 EVFHEM 215


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 225/450 (50%), Gaps = 10/450 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA  Q  RM+   H P ++Q   +L    K       + +   +    I PD  +   
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NC C  G +  A  ++ K+  +GY  +TVT  +L++GLC+ G + ++L F D+L+ +G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              +  +Y  L+    K     AA++LL  I  +  +PN+V YN ++  LCK     EA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++  KG   NVV+Y+ ++   C+ G+  EA   L EM     +P +  YN L+ +L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A  VL  +VK   +P+  +YN +I     +G    V   +  M      P+ 
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLI-----DGYAKHVFNAVGLM---GVTPDV 335

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +YN +   LC + +V+EA  + + +  K        Y  +I  LC+ G+   A+ L+ E
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDE 395

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG-LCKSR 496
           M   G   +  TY+SLI GLC  G +++A+ +   M++   +PD+   N LL G LCK +
Sbjct: 396 MHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGK 455

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           R   +  +FQ +++KG  PN  TY I++ G
Sbjct: 456 RLKNAQGLFQDLLDKGYHPNVYTYNIIIYG 485



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 146/286 (51%), Gaps = 28/286 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS---------- 127
           KL +A   L  MV K   PDV     L+  L K  K+K+A  V+ ++V +          
Sbjct: 253 KLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYN 312

Query: 128 -----------------GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
                            G+ PD  SY  ++N LCK   V  A+ L ++M       NTVT
Sbjct: 313 TLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVT 372

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YNSL+ GLC  G ++ +   +D +  +G   N  TY+ L+    K   +  A+ L++ + 
Sbjct: 373 YNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMK 432

Query: 231 AKGGKPNLVSYNVLLTGL-CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
            +G +P++ + N+LL GL CK  R + A   F+DL  KG+ PNV +YNI++   C EG  
Sbjct: 433 DQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLL 492

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +EA  L ++M+    SP  +T+ I+I +L   G+TD A K+L EM+
Sbjct: 493 DEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMI 538



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 146/339 (43%), Gaps = 28/339 (8%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P ++ +N +L    K       +   R L  K  +P+  + NIL+   C  G+   A  +
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L+++      P  VT   LI  L   G+   AL   D+++   FR    SY  +I  +C 
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G+    ++ L ++  R  +PN   YN +   LC    V EA  +   +  K  S+    
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I   C  GK  +A   L EM      PD Y Y++L+  L  EG ++EA  +  V+ 
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300

Query: 475 EYDYKPDVDNFNALLLG---------------------------LCKSRRTDLSLEVFQM 507
           +   KP+V  +N L+ G                           LCK +R + +L +++ 
Sbjct: 301 KTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKE 360

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           M +K  +PN  TY  L++G+     +  + +++ E+  R
Sbjct: 361 MHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDR 399



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 1/157 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ A+  ++ M  +GH  +V+   +L+  LCK  ++ KAI ++  M   GI PD  +  
Sbjct: 385 RISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLN 444

Query: 138 YLVN-CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            L++  LCK   +  A  L + + D GY  N  TYN ++ G C  G L+++     ++  
Sbjct: 445 ILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMED 504

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
            G  PNA T+  ++ A  ++     A KLL ++IA+G
Sbjct: 505 SGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 1/226 (0%)

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D AL     M+  R  P    +N I+           VV    ++  +  +P+  T N 
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 384 LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L    C +G++  AF+++  +              +I  LC KG+  +A     ++   G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           F  D  +Y +LI G+C  G    A+++   ++    +P+V  +N ++  LCK +    + 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            +F  M  KG   N  TY+ ++ G     +L  +   L E+ L+ +
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAI 269



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 76/141 (53%), Gaps = 4/141 (2%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C  G+   AF +L ++ K+G+ PD+ T ++LI+GLC++G +++AL     +    
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           ++ D  ++  L+ G+CK   T  ++++ + +  +   PN   Y  +++ +  +  +  + 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 538 EVLKELQLR----QVVSESAV 554
            +  E+ ++     VV+ SA+
Sbjct: 224 NLFSEMSVKGISANVVTYSAI 244



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL-CKANKMKKAIKVMEMMVSSGIIPDA 133
           ++ +L+ A   + +M  +G +PD+     LL+ L CK  ++K A  + + ++  G  P+ 
Sbjct: 417 KNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNV 476

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  ++   CK+G +  A  L  KMED G   N +T+  ++  L   G  +++ + L  
Sbjct: 477 YTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCE 536

Query: 194 LIQKGLV 200
           +I +GL+
Sbjct: 537 MIARGLL 543


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 229/470 (48%), Gaps = 15/470 (3%)

Query: 63  NRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME 122
           N K GN   T+        AF     M+     P +   T+LL  L K     +   +  
Sbjct: 69  NCKTGNITATQ--------AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYN 120

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
            M  SGI PD  +   L+NCLC    VG  + ++  +   GY  + VTY +L++GLCM  
Sbjct: 121 QMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEH 180

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KP 236
            ++++     R+ + G  PNA TY  L++   +   +  A+KL  +++          KP
Sbjct: 181 RISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKP 240

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            ++SY++++  LCK+ R +EA   F ++  +G  P V+SY  L+   C  G+WEEA  L 
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLF 300

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM      P +VT+N+LI  L   GK   A  +L+ M++    P+  +YN +I   C  
Sbjct: 301 NEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLV 360

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           G ++   +    M  + C+P+   Y  L    C   KV+EA  +   +         + Y
Sbjct: 361 GDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTY 420

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             ++T L + GK   A +L   M  YG   D Y Y   + GLC  G + EA+E+F  ++ 
Sbjct: 421 GALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKS 480

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           Y+ K D++ FN L+ GLCK+ + + + E+F+ + ++   P+  TY I++ 
Sbjct: 481 YNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIH 530



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 238/491 (48%), Gaps = 21/491 (4%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +  F    +M   G  PD      LL  LC  N++ + + VM  ++  G IPD  +YT L
Sbjct: 113 SQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTL 172

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LC +  +  A  L  +M+  G   N +TY +L++GLC  GN++ +L+    ++    
Sbjct: 173 IKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSS 232

Query: 200 V------PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +      P   +YS +++A  K+R    A  L +++  +G  P ++SY  L+ G C  G+
Sbjct: 233 LYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGK 292

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA R F ++ ++G +PNVV++N+L+  LC EG+  EA +LL  M      P ++TYN 
Sbjct: 293 WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNS 352

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + A ++   M      P    Y  +I   C   KV+  +K  + M    
Sbjct: 353 LIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 412

Query: 374 CKPNEGTYNGLAMLCG------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVI--TSLCRK 425
            +P+  TY   A+L G      VG  ++ F +++  G      P + Y Y I    LC+ 
Sbjct: 413 KRPDVKTYG--ALLTGLFQGGKVGDAKKLFGVMKVYG-----IPGDLYIYGIFLNGLCKN 465

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G  ++A +L  ++  Y    D   ++ LI GLC  G +E A E+F  + + + +PDV  +
Sbjct: 466 GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 525

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           N ++   C+  +   +  +FQ M + G  P++ TY  L+ G     +LE   E+L  +  
Sbjct: 526 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585

Query: 546 RQVVSESAVER 556
           R V  +  + R
Sbjct: 586 RDVSLDVNILR 596



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 199/415 (47%), Gaps = 7/415 (1%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII----- 130
           +H+++ A L   RM   G  P+ +    L+  LC+   +  A+K+ + M++   +     
Sbjct: 179 EHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINF 238

Query: 131 -PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P   SY+ +++ LCK      A  L E+M+  G     ++Y SL+ G C  G   ++ +
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKR 298

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             + ++ +G+ PN  T++ L++   KE  V  A  LL+ +I +G  PNL++YN L+ G C
Sbjct: 299 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 358

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
             G    A   F  +PSKG EP+V+ Y +L+   C   + EEA +L   M    + P + 
Sbjct: 359 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 418

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  L+  L   GK   A K+   M           Y   +  LC  G +   ++  +++
Sbjct: 419 TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKL 478

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                K +   +N L   LC  GK++ A+ + + L  ++       Y  +I   CR G+ 
Sbjct: 479 KSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQV 538

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            +A  L  +M K G TPD  TY++LIRG      +E+ +E+  +M + D   DV+
Sbjct: 539 VKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 593



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 158/314 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D + ++A    E M  +G  P V+  T+L++  C   K ++A ++   MV+ G+ 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L++ LCK+G V  A  L+E M   G   N +TYNSL+ G C++G+LN + + 
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  P+   Y+ L+    K   V  AMKL + ++  G +P++ +Y  LLTGL +
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 429

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  +A + F  +   G   ++  Y I L  LC  G   EA EL  ++   +    I  
Sbjct: 430 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 489

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +N LI  L   GK + A ++ +++ +   +P   +YN +I   C  G+V        +M 
Sbjct: 490 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 549

Query: 371 HRRCKPNEGTYNGL 384
              C P++ TY  L
Sbjct: 550 KNGCTPDKITYATL 563



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 170/359 (47%), Gaps = 11/359 (3%)

Query: 179 CMLGNLN--QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           C  GN+   Q+ QF   ++     P   +++ LL    K +       L + +   G  P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +  + N+LL  LC   R  E +     +  +G+ P++V+Y  L++ LCME R  +A  L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG------RFRPSAASYNPII 350
             M     +P  +TY  L+  L   G    ALK+  EM+         F+P   SY+ II
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQN 408
             LC + + D      ++M  +   P   +Y  L     CG GK +EA  +   + N+  
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCG-GKWEEAKRLFNEMVNQGV 308

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 +  +I  LC++GK  +A  LL  M + G  P+  TY+SLI G C+ G +  A E
Sbjct: 309 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARE 368

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +FV M     +PDV  +  L+ G CK+ + + +++++  M++ G+ P+  TY  L+ G+
Sbjct: 369 LFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGL 427



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 128/266 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   LE M+ +G  P+++   +L+   C    +  A ++   M S G  
Sbjct: 320 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 379

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   YT L+N  CK   V  AM+L   M   G   +  TY +L+ GL   G +  + + 
Sbjct: 380 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G+  + + Y   L    K   +  AM+L + + +   K ++  +N L+ GLCK
Sbjct: 440 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 499

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E A   F  LP +  +P+VV+YNI++   C  G+  +AN L  +M+    +P  +T
Sbjct: 500 AGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKIT 559

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVK 336
           Y  LI       K +  +++L  MV+
Sbjct: 560 YATLIRGFFESKKLEKVVELLHMMVQ 585



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 133/301 (44%), Gaps = 9/301 (2%)

Query: 249 CKEGR--TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           CK G     +A +FF  +      P + S+  LL  L     + +   L  +M     SP
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
              T NIL+  L    +    L V+  +++  + P   +Y  +I  LC E ++       
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF------YKYVI 419
            +M    C PN  TY  L   LC  G +  A  + Q + N  +     F      Y  +I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
            +LC+  +  +A  L  EM   G TP   +Y+SLI G C  G  EEA  +F  M     +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P+V  FN L+  LCK  +   + ++ ++MI++G +PN  TY  L+EG     +L  + E+
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 540 L 540
            
Sbjct: 370 F 370



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 2/158 (1%)

Query: 388 CGVGKVQ--EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
           C  G +   +AF     +     + P   + ++++ L +     Q F L  +M   G +P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  T + L+  LC    + E L +   +    Y PD+  +  L+ GLC   R   +  +F
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             M + G  PN  TY  L++G+     + ++ ++ +E+
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 2/124 (1%)

Query: 423 CRKGK--TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           C+ G     QAFQ  + M     TP   +++ L+ GL       +   ++  M      P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D    N LL  LC   R    L V   ++ +G +P+  TYT L++G+  +  +  +A + 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 541 KELQ 544
             +Q
Sbjct: 190 TRMQ 193


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 236/466 (50%), Gaps = 1/466 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
            RM+S+G +P+++    ++  LCK   +  A  +M+ +  S + PD  +YT ++   C+K
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            ++  A+Q+  +M   G   NTVTY++L+ GLC  G +N++   +  +I  G++P A T 
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  + A         A +L  D+  KG +PN+ +Y  L++GLC  G  + AI  F  +  
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 383

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  PN V+YN L+  L    R + A  +L  M     SP IVTYN +I      G    
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+ V++ M++     +  +YN II   C  G     ++ LD M    CKP+E +Y  L  
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C + K++ AF +   + +      +  Y  +I   C+  K   A  LL  M + G  P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TY+ LI GL  +     A E+  VM E    P+V  + A++ GLCK+  T L+LE+F
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             MIE+G +PN  TY+ L+  +  + ++E +  +  EL+   ++ +
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 223/460 (48%), Gaps = 7/460 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H L+ A     +M  +G +P+ V  + L+  LC + ++ +A  ++  M+  GI+P A 
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + T  +  LC  G    A +L   M++ G   N  TY +L+ GLC+ G L  ++    R+
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+ PN  TY+ L+    + R +  A  +L+ +   G  PN+V+YN ++ G C  G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+    ++  +G   N+V+YN +++  C  G    A  +L  M  G   P   +Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       K + A  + +EMV     P+  +Y  +I   C + K+D     L+ M    C
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN---KQNSSPQEF-YKYVITSLCRKGKTYQ 430
           +PN  TYN   ++ G+ K Q  F+  + L     ++   P    Y  +I  LC+ G T  
Sbjct: 562 RPNVQTYN--VLIHGLTK-QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A ++  +M + G  P+  TYSSLIR L  EG +EEA  +F  +E +   PD   +  ++ 
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
               S + + +      MI+ G  P   TY +L++G+ ++
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 224/490 (45%), Gaps = 27/490 (5%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA+     M +KG +P+V   T L+  LC +  +K AI +   M   G+ P+  +Y  L+
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N L +   + YA  ++  M   G   N VTYN +++G C+LG+  +++  ++ ++Q+G  
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            N  TY+ +++         +A+++LD +   G KP+  SY  L+ G CK  + E A   
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 517

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++   G  PN V+Y  L+   C + + + A  LL  M      P + TYN+LI  L  
Sbjct: 518 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                 A ++   M++    P+  +Y  +I  LC  G   L ++  ++M  + C PN  T
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 637

Query: 381 YNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEM 438
           Y+ L    G  GKV+EA  +   L  +    P E  Y  +I +    GK   AF  L  M
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLI-----------------------EEALEIFVV-ME 474
            K G  P  +TY  LI+GL  E L+                       ++A+ +    + 
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 756

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E D    V   NAL+  L  + R   + E+   MI +G  P++  Y  L+  +     ++
Sbjct: 757 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 535 LSAEVLKELQ 544
           L+  V K + 
Sbjct: 817 LAMGVFKHMS 826



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 223/471 (47%), Gaps = 20/471 (4%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A L +  M+ +GH  ++V    ++   C +     A++++++M   G  PD  SYT L+ 
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK   +  A  L  +M D G   N VTY +L+ G C    L+ +   L+ + + G  P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L+    K+     A +L   +I +G  PN+V+Y  ++ GLCK G T  A+  F
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G  PN+++Y+ L+R+L  EG+ EEA  L AE++     P  +TY  +I +    
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMS 683

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQMFHRRCKPNEGT 380
           GK +HA   L  M+K   +P+  +Y  +I  L +E  + D  +  L  +      PN   
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV-----PN--- 735

Query: 381 YNGLAMLCGVG---KVQEAFAIIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
                  C  G     Q+A +++ + L         +    ++++L   G+ ++A +LL 
Sbjct: 736 -------CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLG 788

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  PD   Y+SL+  L     ++ A+ +F  M     +  ++ +  L+  LC+  
Sbjct: 789 SMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLH 848

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           R   +   F+ M+ +   P++    +L++G+      +L  E L  ++ R+
Sbjct: 849 RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 192/408 (47%), Gaps = 1/408 (0%)

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           +L+     K  +   M  ++ +   G       Y++L+  L  LG     +    R++ +
Sbjct: 150 HLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 209

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN   Y+ ++ A  K+  V  A  ++  +      P+  +Y  ++ G C++   + A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F  +  +G EPN V+Y+ L+  LC  GR  EA +L+ EM      PT  T    I +
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A ++  +M      P+  +Y  +I+ LC  G + + +    +M      PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L  +L    +++ AF ++  +G    S     Y  +I   C  G   +A  ++ 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M + G + +  TY+++I+G C  G    AL I  +M +   KPD  ++  L+ G CK  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + + +  +F  M++ G  PNE TYT L++G    ++L+ +  +L+ ++
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 192/439 (43%), Gaps = 31/439 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M   G KPD    T L+   CK +KM+ A  +   MV  G+ P+  +YT L++  CK
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A  L+E M+  G   N  TYN L+ GL    N + + +    +I++G+ PN  T
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++   K      A+++ + +I +G  PNL++Y+ L+  L +EG+ EEA   F +L 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG--------- 316
             G  P+ ++Y  ++ +  M G+ E A   L  M      PT+ TY +LI          
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 722

Query: 317 --------------SLAYHGKTDHALKVLDEMVKGRFRP--SAASYNPIIARLCSEGKVD 360
                         S  Y      A+ V+   +     P  S    N +++ L + G+  
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL-AELDPGLSVQVQNALVSNLSTAGRWF 781

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKY 417
              + L  M  +   P++  YN L  LC + +V+    A  + + +  +        YK 
Sbjct: 782 EANELLGSMISQGLCPDQEAYNSL--LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I +LC+  +  +A      M    + PD    + LI GL  +G  +  +E   +ME   
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899

Query: 478 YKPDVDNFNALLLGLCKSR 496
           Y P    +  L     K R
Sbjct: 900 YMPSFHIYTILAREASKKR 918



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 68/135 (50%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  ++  L R G T       + M   G  P+   Y+++I  LC +G + +A  I   + 
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E +  PD   + +++LG C+    D +L+VF  M ++G  PN  TY+ L+ G+     + 
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302

Query: 535 LSAEVLKELQLRQVV 549
            + ++++E+ L  ++
Sbjct: 303 EAFDLIREMILHGIL 317



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 31/258 (12%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F +LER    G  PD +    ++     + K++ A   +  M+ +G  P   +Y  L+  
Sbjct: 658 FAELER---HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714

Query: 143 LCKKGNVGYAMQLVEKMED------YGYPT--------------------NTVTYNSLVR 176
           L  K     A Q +  + D      +GY T                    +    N+LV 
Sbjct: 715 L--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            L   G   ++ + L  +I +GL P+   Y+ LL +  + R V  AM +   +  +G + 
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +L  Y  L+  LC+  R +EA   F ++  + + P+ V   +L+  L  +G  +   E L
Sbjct: 833 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 892

Query: 297 AEMDGGDRSPTIVTYNIL 314
             M+     P+   Y IL
Sbjct: 893 HIMETRRYMPSFHIYTIL 910


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 239/491 (48%), Gaps = 33/491 (6%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++ A   L  M   G  P+ V    L++ L K N++ +A++++E M   G +PDA ++
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL----- 191
             ++  LCK   +  A ++V +M   G+  + +TY  L+ GLC +G ++ +         
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350

Query: 192 ---------------------------DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
                                      D +   G+VP+  TY+ L+   +KE  V  A++
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +L D+  KG KPN+ SY +L+ G CK G+ +EA     ++ + G +PN V +N L+ + C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
            E R  EA E+  EM      P + T+N LI  L    +  HAL +L +M+      +  
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSL 403
           +YN +I      G++    K +++M  +    +E TYN L   LC  G+V +A ++ + +
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
               ++        +I  LCR G   +A +   EM   G TPD  T++SLI GLC  G I
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           E+ L +F  ++     PD   FN L+  LCK      +  +    IE G +PN  T++IL
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710

Query: 524 VEGIAHQDELE 534
           ++ I  Q+ L+
Sbjct: 711 LQSIIPQETLD 721



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 241/479 (50%), Gaps = 6/479 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+S+   P +     ++   C  N++  A+ ++  M   G +P++  Y  L++ L K   
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A+QL+E+M   G   +  T+N ++ GLC    +N++ + ++R++ +G  P+  TY +
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSK 267
           L+    K   V AA     D+  +  KP +V +N L+ G    GR ++A     D+  S 
Sbjct: 328 LMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+V +YN L+     EG    A E+L +M      P + +Y IL+      GK D A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
             VL+EM     +P+   +N +I+  C E ++   V+   +M  + CKP+  T+N L + 
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC V +++ A  +++ + ++   +    Y  +I +  R+G+  +A +L+ EM   G   D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+SLI+GLC  G +++A  +F  M    + P   + N L+ GLC+S   + ++E  +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
            M+ +G  P+  T+  L+ G+     +E    + ++LQ   +  ++     +M +  +G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 188/414 (45%), Gaps = 39/414 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   SY  ++  L        A  +   M     P    T+  +++  C +  ++ +L  
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + + G VPN+  Y  L+ +  K   V+ A++LL+++   G  P+  ++N ++ GLCK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R  EA +    +  +GF P+ ++Y  L+  LC  GR + A +L   +      P IV 
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVI 355

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +N LI     HG+ D A  VL +MV      P   +YN +I     EG V L ++ L  M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            ++ CKPN  +Y  L                                  +   C+ GK  
Sbjct: 416 RNKGCKPNVYSYTIL----------------------------------VDGFCKLGKID 441

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A+ +L EM+  G  P++  ++ LI   C E  I EA+EIF  M     KPDV  FN+L+
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            GLC+      +L + + MI +G + N  TY  L+     + E++ + +++ E+
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 140/244 (57%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++H++ +A      M  KG KPDV    +L+  LC+ +++K A+ ++  M+S G++ +  
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N   ++G +  A +LV +M   G P + +TYNSL++GLC  G ++++    +++
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  + + L+    +   V  A++   +++ +G  P++V++N L+ GLC+ GR 
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+ +  FR L ++G  P+ V++N L+  LC  G   +A  LL E       P   T++IL
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710

Query: 315 IGSL 318
           + S+
Sbjct: 711 LQSI 714



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 42/217 (19%), Positives = 94/217 (43%), Gaps = 16/217 (7%)

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-------G 391
           +R S   Y  +I +L + G+   + + L QM       +EG     ++   +       G
Sbjct: 107 YRHSFDVYQVLIGKLGANGEFKTIDRLLIQM------KDEGIVFKESLFISIMRDYDKAG 160

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKY-VITSLCRKGKTYQ-AFQLLYEMTKYGFTPDSYT 449
              +   ++  + N  +  P  F  Y V+  +   G  ++ A  + Y+M      P  +T
Sbjct: 161 FPGQTTRLMLEMRNVYSCEPT-FKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           +  +++  C    I+ AL +   M ++   P+   +  L+  L K  R + +L++ + M 
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             G +P+  T+  ++ G+   D +  +A+++  + +R
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 236/466 (50%), Gaps = 1/466 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
            RM+S+G +P+++    ++  LCK   +  A  +M+ +  S + PD  +YT ++   C+K
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            ++  A+Q+  +M   G   NTVTY++L+ GLC  G +N++   +  +I  G++P A T 
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  + A         A +L  D+  KG +PN+ +Y  L++GLC  G  + AI  F  +  
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSR 383

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  PN V+YN L+  L    R + A  +L  M     SP IVTYN +I      G    
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+ V++ M++     +  +YN II   C  G     ++ LD M    CKP+E +Y  L  
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C + K++ AF +   + +      +  Y  +I   C+  K   A  LL  M + G  P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TY+ LI GL  +     A E+  VM E    P+V  + A++ GLCK+  T L+LE+F
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             MIE+G +PN  TY+ L+  +  + ++E +  +  EL+   ++ +
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 223/460 (48%), Gaps = 7/460 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H L+ A     +M  +G +P+ V  + L+  LC + ++ +A  ++  M+  GI+P A 
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + T  +  LC  G    A +L   M++ G   N  TY +L+ GLC+ G L  ++    R+
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM 381

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+ PN  TY+ L+    + R +  A  +L+ +   G  PN+V+YN ++ G C  G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+    ++  +G   N+V+YN +++  C  G    A  +L  M  G   P   +Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       K + A  + +EMV     P+  +Y  +I   C + K+D     L+ M    C
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN---KQNSSPQEF-YKYVITSLCRKGKTYQ 430
           +PN  TYN   ++ G+ K Q  F+  + L     ++   P    Y  +I  LC+ G T  
Sbjct: 562 RPNVQTYN--VLIHGLTK-QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A ++  +M + G  P+  TYSSLIR L  EG +EEA  +F  +E +   PD   +  ++ 
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
               S + + +      MI+ G  P   TY +L++G+ ++
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 224/490 (45%), Gaps = 27/490 (5%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA+     M +KG +P+V   T L+  LC +  +K AI +   M   G+ P+  +Y  L+
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N L +   + YA  ++  M   G   N VTYN +++G C+LG+  +++  ++ ++Q+G  
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            N  TY+ +++         +A+++LD +   G KP+  SY  L+ G CK  + E A   
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 517

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++   G  PN V+Y  L+   C + + + A  LL  M      P + TYN+LI  L  
Sbjct: 518 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                 A ++   M++    P+  +Y  +I  LC  G   L ++  ++M  + C PN  T
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 637

Query: 381 YNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEM 438
           Y+ L    G  GKV+EA  +   L  +    P E  Y  +I +    GK   AF  L  M
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLI-----------------------EEALEIFVV-ME 474
            K G  P  +TY  LI+GL  E L+                       ++A+ +    + 
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 756

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E D    V   NAL+  L  + R   + E+   MI +G  P++  Y  L+  +     ++
Sbjct: 757 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 535 LSAEVLKELQ 544
           L+  V K + 
Sbjct: 817 LAMGVFKHMS 826



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 223/471 (47%), Gaps = 20/471 (4%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A L +  M+ +GH  ++V    ++   C +     A++++++M   G  PD  SYT L+ 
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK   +  A  L  +M D G   N VTY +L+ G C    L+ +   L+ + + G  P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L+    K+     A +L   +I +G  PN+V+Y  ++ GLCK G T  A+  F
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G  PN+++Y+ L+R+L  EG+ EEA  L AE++     P  +TY  +I +    
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMS 683

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQMFHRRCKPNEGT 380
           GK +HA   L  M+K   +P+  +Y  +I  L +E  + D  +  L  +      PN   
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV-----PN--- 735

Query: 381 YNGLAMLCGVG---KVQEAFAIIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
                  C  G     Q+A +++ + L         +    ++++L   G+ ++A +LL 
Sbjct: 736 -------CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLG 788

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  PD   Y+SL+  L     ++ A+ +F  M     +  ++ +  L+  LC+  
Sbjct: 789 SMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLH 848

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           R   +   F+ M+ +   P++    +L++G+      +L  E L  ++ R+
Sbjct: 849 RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 192/408 (47%), Gaps = 1/408 (0%)

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           +L+     K  +   M  ++ +   G       Y++L+  L  LG     +    R++ +
Sbjct: 150 HLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 209

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN   Y+ ++ A  K+  V  A  ++  +      P+  +Y  ++ G C++   + A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F  +  +G EPN V+Y+ L+  LC  GR  EA +L+ EM      PT  T    I +
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A ++  +M      P+  +Y  +I+ LC  G + + +    +M      PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L  +L    +++ AF ++  +G    S     Y  +I   C  G   +A  ++ 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M + G + +  TY+++I+G C  G    AL I  +M +   KPD  ++  L+ G CK  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + + +  +F  M++ G  PNE TYT L++G    ++L+ +  +L+ ++
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 192/439 (43%), Gaps = 31/439 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M   G KPD    T L+   CK +KM+ A  +   MV  G+ P+  +YT L++  CK
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A  L+E M+  G   N  TYN L+ GL    N + + +    +I++G+ PN  T
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++   K      A+++ + +I +G  PNL++Y+ L+  L +EG+ EEA   F +L 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG--------- 316
             G  P+ ++Y  ++ +  M G+ E A   L  M      PT+ TY +LI          
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 722

Query: 317 --------------SLAYHGKTDHALKVLDEMVKGRFRP--SAASYNPIIARLCSEGKVD 360
                         S  Y      A+ V+   +     P  S    N +++ L + G+  
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL-AELDPGLSVQVQNALVSNLSTAGRWF 781

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKY 417
              + L  M  +   P++  YN L  LC + +V+    A  + + +  +        YK 
Sbjct: 782 EANELLGSMISQGLCPDQEAYNSL--LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I +LC+  +  +A      M    + PD    + LI GL  +G  +  +E   +ME   
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899

Query: 478 YKPDVDNFNALLLGLCKSR 496
           Y P    +  L     K R
Sbjct: 900 YMPSFHIYTILAREASKKR 918



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 68/135 (50%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  ++  L R G T       + M   G  P+   Y+++I  LC +G + +A  I   + 
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E +  PD   + +++LG C+    D +L+VF  M ++G  PN  TY+ L+ G+     + 
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302

Query: 535 LSAEVLKELQLRQVV 549
            + ++++E+ L  ++
Sbjct: 303 EAFDLIREMILHGIL 317



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 31/258 (12%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F +LER    G  PD +    ++     + K++ A   +  M+ +G  P   +Y  L+  
Sbjct: 658 FAELER---HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714

Query: 143 LCKKGNVGYAMQLVEKMED------YGYPT--------------------NTVTYNSLVR 176
           L  K     A Q +  + D      +GY T                    +    N+LV 
Sbjct: 715 L--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            L   G   ++ + L  +I +GL P+   Y+ LL +  + R V  AM +   +  +G + 
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +L  Y  L+  LC+  R +EA   F ++  + + P+ V   +L+  L  +G  +   E L
Sbjct: 833 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 892

Query: 297 AEMDGGDRSPTIVTYNIL 314
             M+     P+   Y IL
Sbjct: 893 HIMETRRYMPSFHIYTIL 910


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 236/466 (50%), Gaps = 1/466 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
            RM+S+G +P+++    ++  LCK   +  A  +M+ +  S + PD  +YT ++   C+K
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            ++  A+Q+  +M   G   NTVTY++L+ GLC  G +N++   +  +I  G++P A T 
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  + A         A +L  D+  KG +PN+ +Y  L++GLC  G  + AI  F  +  
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 383

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  PN V+YN L+  L    R + A  +L  M     SP IVTYN +I      G    
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+ V++ M++     +  +YN II   C  G     ++ LD M    CKP+E +Y  L  
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C + K++ AF +   + +      +  Y  +I   C+  K   A  LL  M + G  P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TY+ LI GL  +     A E+  VM E    P+V  + A++ GLCK+  T L+LE+F
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             MIE+G +PN  TY+ L+  +  + ++E +  +  EL+   ++ +
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 223/460 (48%), Gaps = 7/460 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H L+ A     +M  +G +P+ V  + L+  LC + ++ +A  ++  M+  GI+P A 
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + T  +  LC  G    A +L   M++ G   N  TY +L+ GLC+ G L  ++    R+
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+ PN  TY+ L+    + R +  A  +L+ +   G  PN+V+YN ++ G C  G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+    ++  +G   N+V+YN +++  C  G    A  +L  M  G   P   +Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       K + A  + +EMV     P+  +Y  +I   C + K+D     L+ M    C
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN---KQNSSPQEF-YKYVITSLCRKGKTYQ 430
           +PN  TYN   ++ G+ K Q  F+  + L     ++   P    Y  +I  LC+ G T  
Sbjct: 562 RPNVQTYN--VLIHGLTK-QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A ++  +M + G  P+  TYSSLIR L  EG +EEA  +F  +E +   PD   +  ++ 
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 678

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
               S + + +      MI+ G  P   TY +L++G+ ++
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 224/489 (45%), Gaps = 27/489 (5%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA+     M +KG +P+V   T L+  LC +  +K AI +   M   G+ P+  +Y  L+
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N L +   + YA  ++  M   G   N VTYN +++G C+LG+  +++  ++ ++Q+G  
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 457

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            N  TY+ +++         +A+++LD +   G KP+  SY  L+ G CK  + E A   
Sbjct: 458 ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 517

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++   G  PN V+Y  L+   C + + + A  LL  M      P + TYN+LI  L  
Sbjct: 518 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                 A ++   M++    P+  +Y  +I  LC  G   L ++  ++M  + C PN  T
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 637

Query: 381 YNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEM 438
           Y+ L    G  GKV+EA  +   L  +    P E  Y  +I +    GK   AF  L  M
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLI-----------------------EEALEIFVV-ME 474
            K G  P  +TY  LI+GL  E L+                       ++A+ +    + 
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 756

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E D    V   NAL+  L  + R   + E+   MI +G  P++  Y  L+  +     ++
Sbjct: 757 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 535 LSAEVLKEL 543
           L+  V K +
Sbjct: 817 LAMGVFKHM 825



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 223/471 (47%), Gaps = 20/471 (4%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A L +  M+ +GH  ++V    ++   C +     A++++++M   G  PD  SYT L+ 
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK   +  A  L  +M D G   N VTY +L+ G C    L+ +   L+ + + G  P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L+    K+     A +L   +I +G  PN+V+Y  ++ GLCK G T  A+  F
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G  PN+++Y+ L+R+L  EG+ EEA  L AE++     P  +TY  +I +    
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMS 683

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQMFHRRCKPNEGT 380
           GK +HA   L  M+K   +P+  +Y  +I  L +E  + D  +  L  +      PN   
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV-----PN--- 735

Query: 381 YNGLAMLCGVG---KVQEAFAIIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
                  C  G     Q+A +++ + L         +    ++++L   G+ ++A +LL 
Sbjct: 736 -------CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLG 788

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  PD   Y+SL+  L     ++ A+ +F  M     +  ++ +  L+  LC+  
Sbjct: 789 SMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLH 848

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           R   +   F+ M+ +   P++    +L++G+      +L  E L  ++ R+
Sbjct: 849 RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 192/408 (47%), Gaps = 1/408 (0%)

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           +L+     K  +   M  ++ +   G       Y++L+  L  LG     +    R++ +
Sbjct: 150 HLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 209

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN   Y+ ++ A  K+  V  A  ++  +      P+  +Y  ++ G C++   + A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F  +  +G EPN V+Y+ L+  LC  GR  EA +L+ EM      PT  T    I +
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A ++  +M      P+  +Y  +I+ LC  G + + +    +M      PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L  +L    +++ AF ++  +G    S     Y  +I   C  G   +A  ++ 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M + G + +  TY+++I+G C  G    AL I  +M +   KPD  ++  L+ G CK  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + + +  +F  M++ G  PNE TYT L++G    ++L+ +  +L+ ++
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 190/431 (44%), Gaps = 31/431 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M   G KPD    T L+   CK +KM+ A  +   MV  G+ P+  +YT L++  CK
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A  L+E M+  G   N  TYN L+ GL    N + + +    +I++G+ PN  T
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++   K      A+++ + +I +G  PNL++Y+ L+  L +EG+ EEA   F +L 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG--------- 316
             G  P+ ++Y  ++ +  M G+ E A   L  M      PT+ TY +LI          
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 722

Query: 317 --------------SLAYHGKTDHALKVLDEMVKGRFRP--SAASYNPIIARLCSEGKVD 360
                         S  Y      A+ V+   +     P  S    N +++ L + G+  
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL-AELDPGLSVQVQNALVSNLSTAGRWF 781

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKY 417
              + L  M  +   P++  YN L  LC + +V+    A  + + +  +        YK 
Sbjct: 782 EANELLGSMISQGLCPDQEAYNSL--LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I +LC+  +  +A      M    + PD    + LI GL  +G  +  +E   +ME   
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 899

Query: 478 YKPDVDNFNAL 488
           Y P    +  L
Sbjct: 900 YMPSFHIYTIL 910



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 68/135 (50%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  ++  L R G T       + M   G  P+   Y+++I  LC +G + +A  I   + 
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 242

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E +  PD   + +++LG C+    D +L+VF  M ++G  PN  TY+ L+ G+     + 
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 302

Query: 535 LSAEVLKELQLRQVV 549
            + ++++E+ L  ++
Sbjct: 303 EAFDLIREMILHGIL 317



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 31/258 (12%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F +LER    G  PD +    ++     + K++ A   +  M+ +G  P   +Y  L+  
Sbjct: 658 FAELER---HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714

Query: 143 LCKKGNVGYAMQLVEKMED------YGYPT--------------------NTVTYNSLVR 176
           L  K     A Q +  + D      +GY T                    +    N+LV 
Sbjct: 715 L--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            L   G   ++ + L  +I +GL P+   Y+ LL +  + R V  AM +   +  +G + 
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 832

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +L  Y  L+  LC+  R +EA   F ++  + + P+ V   +L+  L  +G  +   E L
Sbjct: 833 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 892

Query: 297 AEMDGGDRSPTIVTYNIL 314
             M+     P+   Y IL
Sbjct: 893 HIMETRRYMPSFHIYTIL 910



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 36/194 (18%)

Query: 99  VQATN-LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           VQ  N L+ +L  A +  +A +++  M+S G+ PD  +Y  L+  L +  NV  AM + +
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
            M   G   +   Y  L+  LC L    ++    + ++ +   P                
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNP---------------- 867

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                    DD++            VL+ GL ++G  +  + F   + ++ + P+   Y 
Sbjct: 868 ---------DDVVQA----------VLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYT 908

Query: 278 ILLRSLCMEGRWEE 291
           IL R    +  W+ 
Sbjct: 909 ILAREASKKRSWKH 922


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 231/468 (49%), Gaps = 15/468 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  + F Q+E+    G  PD +    ++  L KA   ++A+KV++ M++   +P   
Sbjct: 240 RVKEAREVFGQMEKC---GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEV 296

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  LVN LCK G +  A +L   M   G+  N+V Y SL+ G    G + ++    D +
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  T++ +++   K      A K  ++++  G KPN+V+Y  ++ GL K GR 
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A R  + + + G  P+ V+Y  LL   C  GR +EA +LL E+D    SP +  Y+ L
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP-----IIARLCSEGKVDLVVKCLDQM 369
           +  L   G  ++ L  L E  K     +A + +P     II  LC  G++D   +   +M
Sbjct: 477 VKGLCDGGSVENTLDDLFEQSKA----AAENLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532

Query: 370 FHRRCKPNEGTYNGLA-MLCGV--GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
               CKP+  TYN L   LC     +V+ AFA++  L           Y  +   LC+ G
Sbjct: 533 VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIG 592

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A ++L E +  G+  D   Y++L  GLC +G ++ A+ +F  M      PD   + 
Sbjct: 593 EVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYC 652

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            ++ GL K ++ + + + F  MI KGQ P   TYT LV+ + H   ++
Sbjct: 653 CIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVD 700



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 241/509 (47%), Gaps = 40/509 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP-DA 133
           R  + +DA    E M  K  KPD+     L+  LCKA   +KA +V   M++ G +P D 
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           + +T +V  L K   V  A ++  +ME  G+P + + YN+++ GL   G+  ++L+ LD 
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ K  VP   TY  L+ +  K   +  A +L   + A G +PN V Y  L+ G  K GR
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EA   F ++   G+ P+V+++ +++  LC  G +E+A +   EM  G   P +VTY  
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L+  G+  +A +++  M+     P + +Y  ++   C  G++D   + LD++    
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465

Query: 374 CKPNEGTYNGLAM-------------------------------------LCGVGKVQEA 396
             PN   Y+ L                                       LC  G++ EA
Sbjct: 466 SSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEA 525

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLC--RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
             I Q + ++        Y  +I  LC  R+ +  +AF LL+++   G+ PD+ TY+ L 
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLC 585

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC  G ++ A+++        +  DV  + AL  GLC   + D ++ +FQ M+ +G  
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
           P+   Y  ++ G+    +LE + +   E+
Sbjct: 646 PDAAAYCCIINGLIKGKKLEDACKFFDEM 674



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 223/466 (47%), Gaps = 7/466 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M+  G  P+      L+    +  +   A+   E+M      PD  ++  LV+CLCK 
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202

Query: 147 GNVGYAMQLVEKMEDYGY-PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           G    A ++  +M   G+ P +   + ++VR L     + ++ +   ++ + G  P+A  
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++   K      A+K+LD+++AK   P  V+Y +L+  LCK G  E A   FR + 
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + GF PN V Y  L+      GR +EA  L  EM      P ++T+ ++I  L   G  +
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A K  +EM++G  +P+  +Y  II  L   G+V    + +  M    C P+  TY  L 
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C +G++ EA  ++  L +K +SSP  + Y  ++  LC  G        L+E +K   
Sbjct: 443 DGFCKLGRLDEAAQLLDEL-DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAA 501

Query: 444 -TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR--RTDL 500
              D     S+I GLC  G ++EA  IF  M     KPD   +N L+ GLC+SR  R + 
Sbjct: 502 ENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVER 561

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +  +   +   G +P+  TYT L  G+    E++ + ++L+E   R
Sbjct: 562 AFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR 607



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 228/499 (45%), Gaps = 49/499 (9%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M + G +P+ V  T+L++   K+ +MK+A  + + MV +G  PD  ++T +++ LCK GN
Sbjct: 321 MAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN 380

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A +  E+M   G   N VTY ++++GL  +G +  + + +  +I  G  P++ TY  
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL------------------------ 244
           LL+   K   +  A +LLD++      PNL  Y+ L                        
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAA 500

Query: 245 ------------LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM--EGRWE 290
                       + GLCK GR +EA R F+ + S+G +P+  +YNIL+  LC   E R E
Sbjct: 501 AENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVE 560

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            A  LL +++     P  VTY  L   L   G+ D A+K+L+E     +     +Y  + 
Sbjct: 561 RAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNK 406
             LC +G+VD  V    +M  +   P+   Y    NGL       K+++A      +  K
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK---GKKLEDACKFFDEMIGK 677

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG-FTPDSYTYSSLIRGLCMEGLIEE 465
                   Y  ++ +LC  G   +AF     M   G        Y +LI G C    ++ 
Sbjct: 678 GQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDA 737

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           AL++F  M      P      +L  GL +S +T+ + E+ Q M   G  P+  T+T +++
Sbjct: 738 ALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797

Query: 526 GIAHQDELELSAEVLKELQ 544
           G+   DE   S ++LK +Q
Sbjct: 798 GLRKSDE---SGKLLKLVQ 813



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 212/469 (45%), Gaps = 40/469 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A    + MV  G++PDV+  T ++  LCK+   ++A K  E M+  G  P+  +YT
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  L K G V  A ++++ M  +G   ++VTY  L+ G C LG L+++ Q LD L + 
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 198 GLVPNAFTYSFL-------------LEAAYKERGVHA----------------------- 221
              PN   YS L             L+  +++    A                       
Sbjct: 465 SSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDE 524

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCK--EGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
           A ++   ++++G KP+  +YN+L+ GLC+  E R E A     DL   G+ P+ V+Y  L
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPL 584

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
              LC  G  + A ++L E      +  +V Y  L   L Y G+ D A+ +  EMV+   
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
            P AA+Y  II  L    K++   K  D+M  +  KP   TY  L   LC  G V EAF 
Sbjct: 645 APDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFH 704

Query: 399 IIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
             +  L   +       Y  +I   C+  K   A +L  +M   G  P + T +SL  GL
Sbjct: 705 RFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGL 764

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
              G  E+A E+   M      P    F A+L GL KS  +   L++ Q
Sbjct: 765 VRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQ 813



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 210/459 (45%), Gaps = 40/459 (8%)

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG--------- 177
           +G   D  +Y  L+N L  + N      + E+M   G   NT ++N L+R          
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172

Query: 178 --------------------------LCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLL 210
                                     LC  G   ++ +    ++  G V P+   ++ ++
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
               K + V  A ++   +   G  P+ ++YN ++ GL K G  +EA++   ++ +K   
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P  V+Y IL+ SLC  G  E A EL   M      P  V Y  LI   A  G+   A  +
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
            DEMV+  +RP   ++  +I  LC  G  +   K  ++M    CKPN  TY  +   L  
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           +G+V  AF I++ +           Y  ++   C+ G+  +A QLL E+ K   +P+   
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472

Query: 450 YSSLIRGLCMEGLIEEAL-EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           YSSL++GLC  G +E  L ++F   +      D     ++++GLCK+ R D +  +FQ M
Sbjct: 473 YSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532

Query: 509 IEKGQMPNETTYTILVEGI--AHQDELELSAEVLKELQL 545
           + +G  P+ TTY IL+ G+  + ++ +E +  +L +L++
Sbjct: 533 VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 178/385 (46%), Gaps = 35/385 (9%)

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
           E  G+  +  TYN L+  L    N +Q     + +++ G+ PN F+++ L+ +  + R  
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF-EPNVVSYNI 278
             A+   + +  K  KP+L ++ +L+  LCK G  E+A   F ++ + GF  P+   +  
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++R+L    R +EA E+  +M+     P  + YN +I  LA  G    ALKVLD M+   
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFA 398
             P+  +Y  ++  LC  G ++                               + +E F 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLE-------------------------------RAEELFR 319

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           ++ + G + NS     Y  +I    + G+  +A  L  EM + G+ PD  T++ +I GLC
Sbjct: 320 VMAASGFRPNSV---IYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G  E+A + F  M     KP+V  +  ++ GL K  R   +  + + MI  G  P+  
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436

Query: 519 TYTILVEGIAHQDELELSAEVLKEL 543
           TY  L++G      L+ +A++L EL
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDEL 461



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 1/266 (0%)

Query: 69  NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG 128
           N   R R++++  AF  L  +   G+ PD V  T L   LCK  ++ +A+K++E   S G
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
              D  +YT L   LC +G V  A+ L ++M   G   +   Y  ++ GL     L  + 
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDAC 668

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTG 247
           +F D +I KG  P   TY+ L++A      V  A    + ++A+G    +++ Y+ L+ G
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHG 728

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK  + + A++ F D+ S+G  P  V+   L   L   G+ E+A ELL EM  G   P 
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDE 333
             T+  ++  L    ++   LK++ E
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQE 814



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 4/173 (2%)

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           TYN L  +L       + +AI + +  K   +P  F +  +I S  R  +   A      
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEM-LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEI 179

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY-KPDVDNFNALLLGLCKSR 496
           M +    PD +T+  L+  LC  G+ E+A E+F  M    +  PD     A++  L K++
Sbjct: 180 MKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK 239

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           R   + EVF  M + G  P+   Y  +++G+A     + + +VL  +  +  V
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292



 Score = 47.0 bits (110), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 2/126 (1%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           V+ SL   G     F+   E  + GF  D +TY+ L+  L  E    +   I   M +  
Sbjct: 92  VLRSLKVTGTAISFFRWAGE--QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAG 149

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             P+  +FN L+    ++RR D ++  F++M  K   P+  T+ ILV+ +      E + 
Sbjct: 150 IAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAF 209

Query: 538 EVLKEL 543
           EV  E+
Sbjct: 210 EVFHEM 215


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 243/471 (51%), Gaps = 17/471 (3%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           HR  +L DA   L+ +   G   D V    L+   C+  ++  A +V+E    SG   + 
Sbjct: 123 HR--RLADAERVLDALKESGSA-DAVSHNTLVAGYCRDGRLADAERVLEAAKVSGAA-NV 178

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT L+N  C+ G +  A+ L+  M       +T TYN++++GLC      ++ + ++ 
Sbjct: 179 VTYTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWEKAEELMEE 235

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +I+    PN  T++  + +  +   +  A++LL+ +   G  P++V Y+ L+ G  ++GR
Sbjct: 236 MIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGR 295

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+     +  K   PN V YN  L+ LCM  RW++  EL+AEM   D  P   T+++
Sbjct: 296 VDDALVLLNTMLCK---PNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSM 352

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L   L  HG  D A++V+++M K   RP    YN +I     +G+VD  +  LD M    
Sbjct: 353 LTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML--- 409

Query: 374 CKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+  ++N  L  LC   +  +   +I  +  +     +  +  +I SLC+ G    A 
Sbjct: 410 CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAI 469

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++  +M KY  TPD  TYSSLI G   +GL+E A+E+F  M     KPD+ ++NA+L GL
Sbjct: 470 EVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMP---CKPDIFSYNAVLKGL 526

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           C++ R + + E+   M  K   PNE T+ IL+  +  +   + + EV K++
Sbjct: 527 CRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQM 577



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 240/479 (50%), Gaps = 45/479 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L DA   L  + S    PD      +L  LC A + +KA ++ME M+ +   P+  
Sbjct: 190 RSGRLADA---LNLIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEV 246

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG-------YPT--------------------- 166
           ++   +   C+ G + +A+QL+E+M  YG       Y T                     
Sbjct: 247 TFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTM 306

Query: 167 ----NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
               NTV YN+ ++GLCM        + +  +++K   PN  T+S L     +   V  A
Sbjct: 307 LCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCA 366

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           M++++ +   G +P++V YN L+    ++GR ++A+     L S    P+ +S+N  L++
Sbjct: 367 MEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALML---LDSMLCNPDTISFNAALKA 423

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC   RW +  EL+A+M   D     +T+NILI SL  HG  +HA++V ++M K R  P 
Sbjct: 424 LCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPD 483

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQ 401
             +Y+ +I     +G V+  ++    M    CKP+  +YN  L  LC   + ++A  +I 
Sbjct: 484 IVTYSSLINGFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIA 540

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           ++  K     +  +  +I SLC+KG   +A ++  +M +YG TPD +TY++LI G   +G
Sbjct: 541 NMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQG 600

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            +++AL +   M     KPD  ++N+ L GLC++ R   + E+   M+ K   PNE T+
Sbjct: 601 RLDDALNLLSTMS---CKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 47/328 (14%)

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           + AA++L+  +      P +++ N+L+  LC   R  +A R    L   G   + VS+N 
Sbjct: 92  LDAALRLVGSM-PSSEPPAVIACNILIKKLCAHRRLADAERVLDALKESG-SADAVSHNT 149

Query: 279 LLRSLCMEGRWEEANELL--AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           L+   C +GR  +A  +L  A++ G   +  +VTY  LI      G+   AL ++  M  
Sbjct: 150 LVAGYCRDGRLADAERVLEAAKVSG---AANVVTYTALINGYCRSGRLADALNLIASMPV 206

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEA 396
               P   +YN ++  LC   + +   + +++M    C PNE T                
Sbjct: 207 A---PDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVT---------------- 247

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
                             +   I S C+ G    A QLL  M +YG TPD   YS+L+ G
Sbjct: 248 ------------------FATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNG 289

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
              +G +++AL   V++     KP+   +NA L GLC + R     E+   M+ K   PN
Sbjct: 290 FSEQGRVDDAL---VLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPN 346

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQ 544
           E T+++L   +     ++ + EV++++Q
Sbjct: 347 EATFSMLTSCLCQHGLVDCAMEVVEQMQ 374



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 3/134 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  DA   +  M  K   P+ +    L+  LC+     +AI+V + M   G  PD  
Sbjct: 528 RAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIF 587

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N   ++G +  A+ L+  M       + ++YNS ++GLC      ++ + +  +
Sbjct: 588 TYNALINGFSEQGRLDDALNLLSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEM 644

Query: 195 IQKGLVPNAFTYSF 208
           ++K   PN  T+ +
Sbjct: 645 LRKKCPPNEVTFKY 658


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 238/503 (47%), Gaps = 36/503 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+DA      MV     P +V+   LL  + K  K    I + E M +  I  D  SY 
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+NC C++  +  A+ ++ KM   GY  + VT +SL+ G C    ++ ++  +D++++ 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG----- 252
           G  P+  T++ L+   +       A+ L+D ++ +G +P+LV+Y  ++ GLCK G     
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 253 ------------------------------RTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                                           ++A   F  + +KG  P+V +YN L+  
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  GRW +A+ LL+ M     +P +VT++ LI +    GK   A K+ DEM+K    P 
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             +Y+ +I   C   ++D      + M  + C PN  TYN L    C   +V+E   + +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  +        Y  +I  L + G    A ++  +M   G  PD  TYS L+ GLC  G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +E+AL +F  +++   +PD+  +N ++ G+CK+ + +   ++F  +  KG  PN   YT
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 522 ILVEGIAHQDELELSAEVLKELQ 544
            ++ G   +   E +  + +E++
Sbjct: 540 TMISGFCRKGLKEEADALFREMK 562



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 233/460 (50%), Gaps = 2/460 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA   +++MV  G+KPD V    L++ L   NK  +A+ +++ MV  G  PD  +Y 
Sbjct: 165 RISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 224

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VN LCK+G++  A+ L++KME      + V YN+++ GLC   +++ +    +++  K
Sbjct: 225 AVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK 284

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ FTY+ L+           A +LL ++I +   PN+V+++ L+    KEG+  EA
Sbjct: 285 GIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEA 344

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + + ++  +  +P++ +Y+ L+   CM  R +EA  +   M   D  P +VTYN LI  
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                + +  +++  EM +     +  +YN +I  L   G  D+  K   +M      P+
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ L   LC  GK+++A  + + L   +       Y  +I  +C+ GK    + L  
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            ++  G  P+   Y+++I G C +GL EEA  +F  M+E    PD   +N L+    +  
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDG 584

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
               S E+ + M   G + + +T ++++  + H   LE S
Sbjct: 585 DKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKS 623



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 240/492 (48%), Gaps = 1/492 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L  A   L +M+  G++PD+V  ++LL   C + ++  A+ +++ MV  G  PD  
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTV 186

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ L        A+ LV++M   G   + VTY ++V GLC  G+++ +L  L ++
Sbjct: 187 TFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM 246

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +  +  +   Y+ +++   K + +  A  L + +  KG +P++ +YN L++ LC  GR 
Sbjct: 247 EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRW 306

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A R   ++  +   PNVV+++ L+ +   EG+  EA +L  EM      P I TY+ L
Sbjct: 307 SDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     H + D A  + + M+     P+  +YN +I   C   +V+  ++   +M  R  
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N  TYN L   L   G    A  I + + +         Y  ++  LC+ GK  +A  
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   + K    PD YTY+ +I G+C  G +E+  ++F  +     KP+V  +  ++ G C
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +    + +  +F+ M E G +P+   Y  L+       +   SAE++KE++    V +++
Sbjct: 547 RKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 606

Query: 554 VERLVMQYDFEG 565
              +V+    +G
Sbjct: 607 TISMVINMLHDG 618



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 1/271 (0%)

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L R+  +  + ++A  L  EM      P+IV +N L+ ++A   K D  + + + M   R
Sbjct: 51  LSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLR 110

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
                 SYN +I   C   ++ L +  L +M     +P+  T + L    C   ++ +A 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 170

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           A++  +           +  +I  L    K  +A  L+ +M + G  PD  TY +++ GL
Sbjct: 171 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGL 230

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G I+ AL +   ME+   + DV  +N ++ GLCK +  D +  +F  M  KG  P+ 
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDV 290

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            TY  L+  + +      ++ +L  +  R++
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKI 321



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 34/232 (14%)

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  EMV+ R  PS   +N +++ +    K DLV+   ++M + R   +  +YN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L                                  I   CR+ +   A  +L +M K G
Sbjct: 120 IL----------------------------------INCFCRRSQLPLALAVLGKMMKLG 145

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           + PD  T SSL+ G C    I +A+ +   M E  YKPD   FN L+ GL    +   ++
Sbjct: 146 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 205

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +   M+++G  P+  TY  +V G+  + +++L+  +LK+++  ++ ++  +
Sbjct: 206 ALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 244/466 (52%), Gaps = 5/466 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A L  E + +    PDVV  + L+  L +A K + A++V+  M + G  P+  +Y  LV
Sbjct: 27  EAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLV 86

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +CL K G    A++L+ +M D G   +  TYN L+  L   G L+++      + ++G V
Sbjct: 87  DCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCV 146

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ FTY+ L+    K      AM+LL+++   G  P++++Y+ L+TGL K+G T +A + 
Sbjct: 147 PDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKL 206

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F+++  +G +P+ +++  L+ +L   GR ++A ELL EM      P +VTYN LI     
Sbjct: 207 FQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGK 266

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G    A  +LDEM +   +P   +Y+ +I  L    ++D   + L +M    C P+  T
Sbjct: 267 VGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTIT 326

Query: 381 YNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
           YN   ++ G+GK   + +A  +   + +K  +     Y  +IT+L +  +   A  L  E
Sbjct: 327 YN--TLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD +TY S+I  L   G +++A  +F  M      PDV  +NA L  L +  R
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              + ++F+ M E G +P+  TY  L+ G++   E++ +  +LKEL
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 228/443 (51%), Gaps = 9/443 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K   A   +  M +KG KP++     L+  L KA +  +A++++  M  +G +PD  
Sbjct: 56  RAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVR 115

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L K G +  A  L  +M + G   +T TYNSL+ GL  +G   ++++ L+ +
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G  P+  TYS L+    K+     A KL  ++  +G KP+ +++  L+  L K GR 
Sbjct: 176 ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRV 235

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+    ++  +G +P VV+YN L+      G   EA  LL EM      P +VTY+ L
Sbjct: 236 DDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCL 295

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    + D A +VL +M K    P   +YN +I  L   G ++   +  D+M  + C
Sbjct: 296 ITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGC 355

Query: 375 KPNEGTYNGLAMLCG-VGKVQEA---FAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTY 429
            P+  TY+ L    G   +V+ A   F  ++S+G +    P  F Y  +IT L + G+  
Sbjct: 356 NPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ----PDLFTYCSIITVLGKAGQVD 411

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +L  EM   G +PD  TY++ +  L   G  +EA +IF  M+E    PDV  ++ALL
Sbjct: 412 DADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALL 471

Query: 490 LGLCKSRRTDLSLEVFQMMIEKG 512
           LGL K++  D +  + + +IE+G
Sbjct: 472 LGLSKTKEVDDACGLLKELIEQG 494



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 243/523 (46%), Gaps = 37/523 (7%)

Query: 61  KPNRKPGNN-NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK 119
           KPN    N   D   +  + ++A   L  M   G  PDV     L+  L KA ++ +A  
Sbjct: 76  KPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFT 135

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
           +   M   G +PD  +Y  L+  L K G    AM+L+E+ME +G P + +TY+SL+ GL 
Sbjct: 136 LFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLG 195

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
             G   ++ +    + ++G  P++ T++ L++A  K   V  A++LLD++  +G KP +V
Sbjct: 196 KDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVV 255

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +YN L+ G  K G   EA     ++   G +P+VV+Y+ L+  L    + +EA ++L +M
Sbjct: 256 TYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKM 315

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           +     P  +TYN LI  L   G  + A ++ D M      P   +Y+ +I  L    +V
Sbjct: 316 EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARV 375

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           +      ++M     +P+  TY  +  + G  G+V +A  +   +  K  S     Y   
Sbjct: 376 ESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAF 435

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL--------------------- 457
           + SL R G+  +A ++  +M + G  PD  TY +L+ GL                     
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGC 495

Query: 458 ---------CME-----GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
                    C+E     G ++EA E+          P   ++NAL+  L K+ R   +  
Sbjct: 496 AFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFN 555

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             + + E+G  P+  +Y+ L+  +    +++ + E+L+E+  R
Sbjct: 556 TLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKR 598



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 202/388 (52%), Gaps = 1/388 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +++DA   L+ M  +G KP VV    L+    K   + +A  +++ M  +G  
Sbjct: 227 DALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCK 286

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L+  L K   +  A Q+++KME  G P +T+TYN+L+ GL   G LN + + 
Sbjct: 287 PDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRL 346

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            DR+  KG  P+  TYS L+ A  K   V +A  L +++ + G +P+L +Y  ++T L K
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ ++A R F ++  KG  P+V++YN  L SL   GR++EA ++  +M      P + T
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ L+  L+   + D A  +L E+++      +  ++  +  L S G VD   + L    
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFAN 526

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +   P   +YN L   L   G+V EAF  ++ L  +        Y  +I++L + G+  
Sbjct: 527 SKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQID 586

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            AF+LL EM+K G      +YS+L+R L
Sbjct: 587 TAFELLEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 209/406 (51%), Gaps = 1/406 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +   AF   + M  +G KPD +  T L+  L KA ++  A+++++ M   G+ P   
Sbjct: 196 KDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVV 255

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+    K G++  A  L+++M+  G   + VTY+ L+ GL     L+++ Q L ++
Sbjct: 256 TYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKM 315

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G  P+  TY+ L+    K   ++ A +L D + +KG  P++V+Y+ L+T L K  R 
Sbjct: 316 EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARV 375

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A   F ++ S G +P++ +Y  ++  L   G+ ++A+ L +EM G   SP ++TYN  
Sbjct: 376 ESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAF 435

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + SL   G+   A K+ ++M +    P  A+Y+ ++  L    +VD     L ++  + C
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGC 495

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +   ++  L +L   G V EA  ++Q   +K        Y  +I +L + G+  +AF 
Sbjct: 496 AFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFN 555

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
            L ++ + G  PD  +YSSLI  L   G I+ A E+   M +   K
Sbjct: 556 TLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLK 601



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 135/245 (55%), Gaps = 1/245 (0%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           SP +VTYN L+ +LA  G+ + A  + +E+   ++ P   SY+ +I  L   GK +  ++
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            + +M  + CKPN  TYN L    G  G+  EA  ++  + +         Y  +I++L 
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + G+  +AF L  EM + G  PD++TY+SLI GL   G  ++A+E+   ME +   PDV 
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +++L+ GL K   T  + ++FQ M  +G+ P+  T+T L++ +     ++ + E+L E+
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 544 QLRQV 548
           + R V
Sbjct: 246 KERGV 250



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 68/138 (49%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  ++ +L + G+  +A  L  E+    +TPD  +YS LI  L   G  E ALE+   M+
Sbjct: 12  YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               KP++  +N L+  L K+ + D +L +   M + G +P+  TY  L+  +     L 
Sbjct: 72  AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131

Query: 535 LSAEVLKELQLRQVVSES 552
            +  +  E++ R  V ++
Sbjct: 132 EAFTLFAEMRERGCVPDT 149


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 221/437 (50%), Gaps = 2/437 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   +++ ++ G +PD V  +  +  LC+   +  A+KV+ +M+  G  PD  +Y+
Sbjct: 281 RVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYS 340

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++NCLC  G +  A  +V +M D G   +T T+N+L+  LC    L ++L     L  K
Sbjct: 341 TVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVK 400

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN +T++ L+ A  K    H A++L +++ + G  P+ V+YN+L+  LC  G+  +A
Sbjct: 401 GLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKA 460

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   +++   G   + V+YN ++  LC   R EEA E+  +MD        +T+N LI  
Sbjct: 461 LDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDG 520

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + D A +++D+M+    +P+  +YN I+   C +G +      L  M     + +
Sbjct: 521 LCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVD 580

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC   + Q A  +++ +  K      + Y  VI SL R      A  L  
Sbjct: 581 VVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFR 640

Query: 437 EMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           EMT+ G  PD++TY  + RGLC   G I+EA +  V M +  + P+  +F  L  GL   
Sbjct: 641 EMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNL 700

Query: 496 RRTDLSLEVFQMMIEKG 512
              D  +   ++++EK 
Sbjct: 701 GMDDYLIRAIELIVEKA 717



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 227/440 (51%), Gaps = 1/440 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M S+G +PDVV    ++  LC+A + + A+ ++E M S  + PD +++T L+    ++G+
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A++L  +M + G    +VT N L+ G C LG +  +L ++ + I  G  P+  T+S 
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            +    +   V  A+K+L  ++ +G +P++ +Y+ ++  LC  G  EEA      +   G
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+  ++N L+ +LC E + EEA +L  E+     SP + T+NILI +L   G    A+
Sbjct: 367 CLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAV 426

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++ +EM      P   +YN +I  LCS GK+   +  L +M    C  +  TYN +   L
Sbjct: 427 RLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGL 486

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   +++EA  +   +           +  +I  LC   +   A +L+ +M   G  P++
Sbjct: 487 CKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNN 546

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+S++   C +G I +A +I   M    ++ DV  +  L+ GLCK+RRT  +L++ + 
Sbjct: 547 VTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRG 606

Query: 508 MIEKGQMPNETTYTILVEGI 527
           M  KG  P    Y  +++ +
Sbjct: 607 MRMKGMKPTPKAYNPVIQSL 626



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 223/460 (48%), Gaps = 1/460 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +   A L LE M S    PD    T L+    +   ++ A+++   M   G  
Sbjct: 204 DALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCS 263

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P + +   L+N  CK G VG A+  +++    G+  + VT+++ V GLC  G+++ +L+ 
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKV 323

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++Q+G  P+ +TYS ++        +  A  +++ ++  G  P+  ++N L+  LC 
Sbjct: 324 LGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCT 383

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           E + EEA+   R+L  KG  PNV ++NIL+ +LC  G    A  L  EM     +P  VT
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNILI +L   GK   AL +L EM       S  +YN II  LC   +++   +  DQM 
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 N  T+N L   LC   ++ +A  ++  + ++        Y  ++T  C++G   
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNIS 563

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A  +L  MT  GF  D  TY++LI GLC     + AL++   M     KP    +N ++
Sbjct: 564 KAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVI 623

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
             L +      +L +F+ M E G  P+  TY I+  G+  
Sbjct: 624 QSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCR 663



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 228/452 (50%), Gaps = 7/452 (1%)

Query: 81  DAFLQLE-RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +A L+L+ RM   G  P  V    L+   CK  ++  A+  ++  ++ G  PD  +++  
Sbjct: 248 EAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTF 307

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           VN LC+ G+V +A++++  M   G   +  TY++++  LC  G L ++   +++++  G 
Sbjct: 308 VNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC 367

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P+  T++ L+ A   E  +  A+ L  ++  KG  PN+ ++N+L+  LCK G    A+R
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVR 427

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F ++ S G  P+ V+YNIL+ +LC  G+  +A +LL EM+      + VTYN +I  L 
Sbjct: 428 LFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLC 487

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
              + + A +V D+M       +A ++N +I  LC+  ++D   + +DQM     +PN  
Sbjct: 488 KRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNV 547

Query: 380 TYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TYN  L   C  G + +A  I+Q++           Y  +I  LC+  +T  A +LL  M
Sbjct: 548 TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGM 607

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  P    Y+ +I+ L       +AL +F  M E    PD   +  +  GLC  R  
Sbjct: 608 RMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLC--RGG 665

Query: 499 DLSLEVFQMMIE---KGQMPNETTYTILVEGI 527
               E F  ++E    G +P  +++ +L EG+
Sbjct: 666 GPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 204/417 (48%), Gaps = 1/417 (0%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G+  +   Y +L+  L +   +        +M   G   + VT+N+++  LC       +
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA 215

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           +  L+ +    + P+  T++ L+E   +E  + AA++L   +   G  P  V+ NVL+ G
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK GR  +A+ + +   + GFEP+ V+++  +  LC  G  + A ++L  M      P 
Sbjct: 276 YCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPD 335

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + TY+ +I  L  +G+ + A  ++++MV     P   ++N +I  LC+E +++  +    
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395

Query: 368 QMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           ++  +   PN  T+N L   LC VG    A  + + + +   +  +  Y  +I +LC  G
Sbjct: 396 ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG 455

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           K  +A  LL EM   G    + TY+++I GLC    IEEA E+F  M+      +   FN
Sbjct: 456 KLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFN 515

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            L+ GLC + R D + E+   MI +G  PN  TY  ++     Q  +  +A++L+ +
Sbjct: 516 TLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 193/394 (48%), Gaps = 2/394 (0%)

Query: 152 AMQLVEKMED-YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
           A  LV    D +G   NT  YN L+  L     +         +  +G+ P+  T++ ++
Sbjct: 144 AFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVI 203

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           +A  + R    A+ +L+++ +    P+  ++  L+ G  +EG  E A+R    +   G  
Sbjct: 204 DALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCS 263

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P  V+ N+L+   C  GR  +A   + +       P  VT++  +  L  +G  DHALKV
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKV 323

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
           L  M++    P   +Y+ +I  LC+ G+++     ++QM    C P+  T+N L + LC 
Sbjct: 324 LGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCT 383

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
             +++EA  + + L  K  S     +  +I +LC+ G  + A +L  EM   G TPD  T
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y+ LI  LC  G + +AL++   ME          +N ++ GLCK RR + + EVF  M 
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             G   N  T+  L++G+ + + ++ +AE++ ++
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQM 537



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 153/300 (51%), Gaps = 5/300 (1%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           +++L +A      +  KG  P+V     L+  LCK      A+++ E M SSG  PD  +
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L++ LC  G +  A+ L+++ME  G P +TVTYN+++ GLC    + ++ +  D++ 
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
             G+  NA T++ L++       +  A +L+D +I++G +PN V+YN +LT  CK+G   
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNIS 563

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A    + + + GFE +VV+Y  L+  LC   R + A +LL  M      PT   YN +I
Sbjct: 564 KAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVI 623

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG-----KVDLVVKCLDQMF 370
            SL        AL +  EM +    P A +Y  +   LC  G       D +V+  D  F
Sbjct: 624 QSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGF 683


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 230/435 (52%), Gaps = 4/435 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL--CKKGNVGYAMQLVEKMEDYGYPTNTV 169
           N ++KA+ ++++   +G +P   SY  +++ +  C+K  V +A ++  +M   G   N  
Sbjct: 146 NFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKP-VIFAEKVYREMIASGVSLNVF 204

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           +YN L+RG C  GNL   L+F + + +   +PN  TY+ ++ A  K + +  A KLL  +
Sbjct: 205 SYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM 264

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
             +G +PNL++YN+++ GLC+ GR EE      ++  KGF P+ V+YN L+   C  G +
Sbjct: 265 GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNF 324

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            +A  L +EM      P +VTY  LI ++   G  + A++  D+M     RP+  +Y  +
Sbjct: 325 HQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSL 384

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I     +G +D   +  D+M      P   TYN L    C  G+++EA  +++ +  K  
Sbjct: 385 INGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGL 444

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           S     Y  +I   CR  +  +AFQ+  EM + G +PD+ TYSSLI+GLC +  + EA +
Sbjct: 445 SPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACD 504

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +F  M      PD   + +L+ G CK    + +L +   MI+KG +P+  TY +L+ G+ 
Sbjct: 505 LFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLN 564

Query: 529 HQDELELSAEVLKEL 543
            Q     +  +L +L
Sbjct: 565 KQARTREAKRLLLKL 579



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 249/483 (51%), Gaps = 16/483 (3%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+VV    ++   CK  ++ +A K++  M   G+ P+  +Y  ++N LC+ G +     +
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + +M+  G+  + VTYN+LV G C +GN +Q+L     +++ GL P+  TY+ L+    K
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK 355

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              ++ AM+  D +  +G +PN V+Y  L+ G  ++G  +EA R + ++   GF P +V+
Sbjct: 356 AGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVT 415

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN LL   C+ GR EEA  LL  M+G   SP +V+Y+ +I     + + D A ++  EMV
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           +    P A +Y+ +I  LC + +++       +M ++   P+E TY  L    C  G + 
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLN 535

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS-- 452
           EA  +   +  K        Y  +I  L ++ +T +A +LL ++      P+  TY +  
Sbjct: 536 EALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLI 595

Query: 453 -------------LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
                        LI+G CM+GL+ EA ++F  M + + KP+   +N ++ G C+     
Sbjct: 596 ESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVH 655

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            + ++++ M++ G +P+  T   LV+ +  +   E    V++++     +S++ + + ++
Sbjct: 656 KAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALV 715

Query: 560 QYD 562
           Q +
Sbjct: 716 QIN 718



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 211/440 (47%), Gaps = 53/440 (12%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++AF  L  M  +G +P+++    ++  LC+  ++++   V+  M   G  PD  +Y 
Sbjct: 253 RIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYN 312

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN  CK GN   A+ L  +M   G P + VTY SL+  +C  GNLN++++F D++  +
Sbjct: 313 TLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR 372

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN  TY+ L+    ++  +  A ++ D++I  G  P +V+YN LL G C  GR EEA
Sbjct: 373 GLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEA 432

Query: 258 IRFFRDLPSKGFEPNVVSYNI-----------------------------------LLRS 282
           I   R +  KG  P+VVSY+                                    L++ 
Sbjct: 433 IGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQG 492

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC + R  EA +L  EM      P   TY  LI      G  + AL + DEM+K  F P 
Sbjct: 493 LCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPD 552

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-------------AML-- 387
             +YN +I  L  + +     + L ++F+    PN  TY+ L             A++  
Sbjct: 553 TVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKG 612

Query: 388 -CGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            C  G + EA  + +S+  K+N  P E  Y  +I   CR G  ++A +L  EM  +GF P
Sbjct: 613 FCMKGLMNEADQVFESM-IKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIP 671

Query: 446 DSYTYSSLIRGLCMEGLIEE 465
            + T  +L++ L  EG+ E+
Sbjct: 672 HTVTIIALVKALYSEGMDEQ 691



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 223/472 (47%), Gaps = 18/472 (3%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M++ G   +V     L+   C A  ++  ++  E M  +  +P+  +Y  ++   CK   
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A +L+  M   G   N +TYN ++ GLC +G + ++   L  + +KG  P+  TY+ 
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K    H A+ L  +++  G  P++V+Y  L+  +CK G    A+ FF  +  +G
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN V+Y  L+     +G  +EA  +  EM      PTIVTYN L+      G+ + A+
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
            +L  M      P   SY+ IIA  C   ++D   +   +M  +   P+  TY+ L   L
Sbjct: 434 GLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL 493

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           C   ++ EA  + Q + NK +  P EF Y  +I   C++G   +A  L  EM K GF PD
Sbjct: 494 CEQRRLNEACDLFQEMLNK-SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPD 552

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN---------------ALLLG 491
           + TY+ LI GL  +    EA  + + +   +  P+   ++               AL+ G
Sbjct: 553 TVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKG 612

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            C     + + +VF+ MI++ Q PNE  Y +++ G      +  + ++ KE+
Sbjct: 613 FCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEM 664



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 27/292 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+ AF     MV KG  PD +  ++L+  LC+  ++ +A  + + M++  ++PD  
Sbjct: 460 RYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEF 519

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+N  CK+G++  A+ L ++M   G+  +TVTYN L+ GL       ++ + L +L
Sbjct: 520 TYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKL 579

Query: 195 IQKGLVPNAFTYSFLLEA--------------AYKERGV-HAAMKLLDDIIAKGGKPNLV 239
                +PN  TY  L+E+               +  +G+ + A ++ + +I +  KPN  
Sbjct: 580 FYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEA 639

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL--- 296
            YNV++ G C++G   +A + ++++   GF P+ V+   L+++L  EG  E+ N ++   
Sbjct: 640 VYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDI 699

Query: 297 ---AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
               ++   + S  +V  N         G  D    +L EM K  F PS A+
Sbjct: 700 LRSCKLSDAELSKALVQIN------HKEGNIDAVFNLLTEMAKDGFLPSGAA 745



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 41/308 (13%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS--YNILLRSLCMEGRWEEANEL--LAEM 299
           L   L +    E+   FF+ L    F  N  S  ++++++S       E+A  +  LA++
Sbjct: 101 LAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKL 160

Query: 300 DGGDRSPTIVTYNILIGSLAYHGK-TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           +G    P +++YN ++ S+    K    A KV  EM+      +  SYN +I   C+ G 
Sbjct: 161 NG--FMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGN 218

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           +++ ++  ++M   RC PN  TYN                                   V
Sbjct: 219 LEMGLRFFEEMERNRCLPNVVTYNT----------------------------------V 244

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I + C+  +  +AF+LL  M   G  P+  TY+ +I GLC  G IEE   +   M+   +
Sbjct: 245 IGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGF 304

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PD   +N L+ G CK      +L +   M+  G  P+  TYT L+  +     L  + E
Sbjct: 305 APDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME 364

Query: 539 VLKELQLR 546
              ++ +R
Sbjct: 365 FFDQMHVR 372


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 240/476 (50%), Gaps = 2/476 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA   L  M   G  PD V    LL   C+   + +A  ++  M   GI P   +Y  
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV+   + G +  A ++VE M  YG+  +  TYN L  GLC  G ++++ +  D + + G
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343

Query: 199 L-VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +P+  TY+ L++A +K R    A++LL+++  KG KP LV++N+++  LCKEG+ EEA
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     +  +G  P+V++YN L+ + C  G   +A  L+ EM G        T N ++ +
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + + A ++L    +  F P   SY  ++A    E   +  ++  DQM  R+  P+
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L   LC + +++EA   +     K     +  Y  +I + C++G    AF+   
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M +  F PD  T ++L+ GLC+ G +++AL++F    E   K DV  +N L+  +CK  
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             D +L  F  M  KG  P+  TY +++  ++     E +  +L +L     +S+S
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 165/607 (27%), Positives = 256/607 (42%), Gaps = 84/607 (13%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSL------NKGFIRVLASTQVTISP 54
           ++ L  S STL   S + FR         PN ++F+L      +KG    LA    T+S 
Sbjct: 178 LSALSRSPSTLPQASLDVFRSLIELRLH-PNHYTFNLLVHTHCSKG---TLADALATLST 233

Query: 55  KDSVYTKPNRKPGNNNDTRH-RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK 113
                  P+    N     H R   L +A   L RM   G  P       L+    +   
Sbjct: 234 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGW 293

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV------------------------ 149
           +K+A KV+E M + G  PD  +Y  L   LC+ G V                        
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYN 353

Query: 150 ------------GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
                         A++L+E+M D G     VT+N +V+ LC  G L ++L  L+++ ++
Sbjct: 354 TLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE 413

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+  TY+ L++A  K   V  A  L+D+++ KG K +  + N +L  LCK  R E+A
Sbjct: 414 GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDA 473

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                  P +GF P+ VSY  ++ +   E   E A  L  +M      P+I TYN LI  
Sbjct: 474 EELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKG 533

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    +   A+  L+E V+    P   +YN II   C EG ++   +  ++M     KP+
Sbjct: 534 LCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T N L   LC  GK+ +A  + +S   K        Y  +I S+C+ G    A     
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFD 653

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-------------------------V 471
           +M   G  PD++TY+ ++  L   G  EEA  +                           
Sbjct: 654 DMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEA 713

Query: 472 VMEEYDYKPDVDNF-----NAL------LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            ++E++ KP+ ++      NAL      L GLC   +   +  V   M++KG   + +TY
Sbjct: 714 DVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTY 773

Query: 521 TILVEGI 527
             L+EG+
Sbjct: 774 ITLMEGL 780



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 161/360 (44%), Gaps = 5/360 (1%)

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRT--EEAIRFFRDLPS 266
           L A  + R  H A +LL  +  + G +P+L + N +L+ L +   T  + ++  FR L  
Sbjct: 142 LSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE 201

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               PN  ++N+L+ + C +G   +A   L+ M G   SP  VTYN L+ +    G    
Sbjct: 202 LRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGE 261

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A  +L  M +    P+  +YN +++     G +    K ++ M     +P+  TYN LAM
Sbjct: 262 ARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAM 321

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK-TYQAFQLLYEMTKYGFT 444
            LC  GKV EAF +   +     + P       +   C K + +  A +LL EM   G  
Sbjct: 322 GLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVK 381

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P   T++ +++ LC EG +EEAL     + E    PDV  +N L+   CK+     +  +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
              M+ KG   +  T   ++  +      E + E+L     R  V +      VM   F+
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 231/455 (50%), Gaps = 3/455 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H++  A L LE M S G  PD    T L+    +   ++ A++V   M+ +G  P   
Sbjct: 209 RAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGV 268

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N  CK G V  A+  +++    G+  + VTYN+ V GLC  G+++ +L+ +D +
Sbjct: 269 TVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLM 328

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+G  P+ FTY+ ++    K   +  A  +++ ++ +G  P+  ++N L+  L  + R 
Sbjct: 329 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+   R+L  KG  P+V ++NIL+ +LC  G       L  EM     +P  VTYNIL
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNIL 448

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   GK  +AL +L+EM       S  +YN II  LC + +++   +  DQM  +  
Sbjct: 449 IDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGI 508

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
             +  T+N L   LC   ++ +A  +I+ +  K+   P    Y  ++T  C++G   +A 
Sbjct: 509 SRSAVTFNTLIDGLCKAKRIDDATELIEQM-VKEGLQPNNITYNSILTHYCKQGNIKKAA 567

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            +L  MT  GF  D  TY +LI GLC  G  + AL++   M     +P    +N ++  L
Sbjct: 568 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +      +L +F+ M E G+ P+  TY I+   +
Sbjct: 628 FRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSL 662



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 241/456 (52%), Gaps = 1/456 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  +G +PDVV    L+  LC+A++++ A+ ++E M S G+ PD +++T L+    ++G+
Sbjct: 188 MTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGS 247

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+++  KM + G     VT N L+ G C +G +  +L ++ + I  G  P+  TY+ 
Sbjct: 248 IEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNT 307

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            +    +   V  A+K++D ++ +G  P++ +YN ++  L K G  +EA      +  +G
Sbjct: 308 FVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 367

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+  ++N L+ +L  + R EEA +L  E+     SP + T+NILI +L   G     +
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 427

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++ +EM      P   +YN +I  LCS GK+   +  L++M    C  +  TYN +   L
Sbjct: 428 RLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDAL 487

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   +++EA  +   +  +  S     +  +I  LC+  +   A +L+ +M K G  P++
Sbjct: 488 CKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNN 547

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+S++   C +G I++A +I   M    ++ DV  +  L+ GLCK+ RT ++L++ + 
Sbjct: 548 ITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 607

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M  KG  P    Y  +++ +  ++ L  +  + +E+
Sbjct: 608 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 224/438 (51%), Gaps = 2/438 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   +++ ++ G +PD V     ++ LC+   +  A+KVM++M+  G  PD  +Y 
Sbjct: 282 RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYN 341

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++NCL K G +  A  +V +M D G   +T T+N+L+  L     L ++L     L  K
Sbjct: 342 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK 401

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+ +T++ L+ A  K    H  ++L +++ + G  P+ V+YN+L+  LC  G+   A
Sbjct: 402 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA 461

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++ S G   + V+YN ++ +LC + R EEA E+  +MD    S + VT+N LI  
Sbjct: 462 LDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + D A +++++MVK   +P+  +YN I+   C +G +      L+ M     + +
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC  G+ Q A  +++ +  K      + Y  VI SL R+     A  L  
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFR 641

Query: 437 EMTKYGFTPDSYTYSSLIRGLCM-EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           EMT+ G  PD+ TY  + R LC   G I+EA +  V M    + P+  +F  L  GL   
Sbjct: 642 EMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 701

Query: 496 RRTDLSLEVFQMMIEKGQ 513
              D  +   +++IEK +
Sbjct: 702 GMDDYLISAIELIIEKAK 719



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 227/459 (49%), Gaps = 5/459 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G + D V   +LL  L + +K+K    V   M   GI PD  +   L+  LC+   V  A
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + ++E+M  +G   +  T+ +L++G    G++  +L+   ++++ G  P   T + L+  
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K   V  A+  +   IA G +P+ V+YN  + GLC+ G    A++    +  +G +P+
Sbjct: 277 YCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V +YN ++  L   G  +EA  ++ +M      P   T+N LI +L+   + + AL +  
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
           E+      P   ++N +I  LC  G   L ++  ++M    C P+E TYN L   LC +G
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMG 456

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           K+  A  ++  +  + N  P+    Y  +I +LC+K +  +A ++  +M   G +  + T
Sbjct: 457 KLGNALDLLNEM--ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVT 514

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           +++LI GLC    I++A E+   M +   +P+   +N++L   CK      + ++ + M 
Sbjct: 515 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMT 574

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             G   +  TY  L+ G+      +++ ++L+ ++++ +
Sbjct: 575 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 613



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 192/420 (45%), Gaps = 36/420 (8%)

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
           + +G   +TV +N L+  L     L       + +  +G+ P+  T + L++A  +   V
Sbjct: 154 DTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQV 213

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A+ +L+++ + G  P+  ++  L+ G  +EG  E A+R    +   G  P  V+ N+L
Sbjct: 214 RTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVL 273

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +   C  GR E+A   + +       P  VTYN  +  L  +G   HALKV+D M++   
Sbjct: 274 INGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
            P   +YN +I  L   G++D     ++QM  R C P+  T+N L + L    +++EA  
Sbjct: 334 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALD 393

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           + + L  K  S     +  +I +LC+ G  +   +L  EM   G TPD  TY+ LI  LC
Sbjct: 394 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLC 453

Query: 459 MEG-----------------------------------LIEEALEIFVVMEEYDYKPDVD 483
             G                                    IEEA E+F  M+         
Sbjct: 454 SMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAV 513

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            FN L+ GLCK++R D + E+ + M+++G  PN  TY  ++     Q  ++ +A++L+ +
Sbjct: 514 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 155/299 (51%), Gaps = 5/299 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++L +A      +  KG  PDV     L+  LCK       I++ E M SSG  PD  +Y
Sbjct: 386 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTY 445

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L++ LC  G +G A+ L+ +ME  G P +TVTYN+++  LC    + ++ +  D++  
Sbjct: 446 NILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDA 505

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+  +A T++ L++   K + +  A +L++ ++ +G +PN ++YN +LT  CK+G  ++
Sbjct: 506 QGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      + + GFE +VV+Y  L+  LC  GR + A +LL  M      PT   YN +I 
Sbjct: 566 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 625

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG-----KVDLVVKCLDQMF 370
           SL        AL +  EM +    P A +Y  +   LC  G       D +V+ +++ F
Sbjct: 626 SLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGF 684


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 245/505 (48%), Gaps = 36/505 (7%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K +DA    + M+     P V+    L   L +  +    + + + M   GI  D  +
Sbjct: 68  DIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYT 127

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD--- 192
              ++NC C++  +G+A   + K+   GY  NTVT+N+L+ GLC+ G + ++++ +D   
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187

Query: 193 --------------------------------RLIQKGLVPNAFTYSFLLEAAYKERGVH 220
                                           R++  G  PN FTY  +L    K     
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           +A+ LL  +  +  KP++V+Y +++  LCK+GR ++A+ FF ++ +KG + NV +YN L+
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLI 307

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
            S C  GRW++  +LL +M     +P +VT++ LI SL   GK   A  + +EM+     
Sbjct: 308 GSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIE 367

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
           P+  +YN +I  LC++ ++D   + +D M  + C P+  TYN L    C   +V +   +
Sbjct: 368 PNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRL 427

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            + +  +   +    Y  +I   C+  K   A ++  EM   G  P   TY+ L+ GLC 
Sbjct: 428 FRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCD 487

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G +EEAL I   M +   + D+  +N ++ G+C + + D +  +F  +  KG   +  +
Sbjct: 488 NGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQS 547

Query: 520 YTILVEGIAHQDELELSAEVLKELQ 544
           Y I++ G+  +  L  +  + ++++
Sbjct: 548 YNIMLSGLCKRSSLSEADALFRKMK 572



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 239/486 (49%), Gaps = 1/486 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL  AF  + ++   G++P+ V    LL  LC   ++ +A+++++ MV S  +PD  
Sbjct: 137 RRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLI 196

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   +VN LC K  V  A+ L+ +M   G   N  TY  ++  +C  GN   +L  L ++
Sbjct: 197 TLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKM 256

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + + P+  TY+ +++   K+  +  A+    ++  KG K N+ +YN L+   C  GR 
Sbjct: 257 EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRW 316

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++  +  RD+ ++   PNVV+++ L+ SL  EG+  EA +L  EM      P  +TYN L
Sbjct: 317 DDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSL 376

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    + D A +++D MV     P   +YN +I   C   +VD  ++   +M  R  
Sbjct: 377 IYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGM 436

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TY+ L    C   K+  A  + Q + ++        Y  ++  LC  G+  +A  
Sbjct: 437 IADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALG 496

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L +M K     D   Y+ +I G+C    +++A  +F  +     K D+ ++N +L GLC
Sbjct: 497 ILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLC 556

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K      +  +F+ M E G  P+  TY  L+      +++  S ++++E++     S+++
Sbjct: 557 KRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAS 616

Query: 554 VERLVM 559
             ++VM
Sbjct: 617 TVKIVM 622



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 214/438 (48%), Gaps = 1/438 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV   H PD++    ++  LC  +++ +A+ ++  M+++G  P+  +Y  ++N +CK GN
Sbjct: 186 MVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGN 245

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ L+ KME      + VTY  ++  LC  G L+ +L F   +  KG+  N FTY+ 
Sbjct: 246 TASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNS 305

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+ +           +LL D+I +   PN+V+++ L+  L KEG+  EA   + ++ ++G
Sbjct: 306 LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            EPN ++YN L+  LC + R +EAN+++  M      P I TYNILI       + D  +
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGM 425

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++  +M          +Y+ +I   C   K+ +  K   +M  +   P   TY  L   L
Sbjct: 426 RLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G+++EA  I+  +   +       Y  +I  +C   K   A+ L   +   G   D 
Sbjct: 486 CDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDI 545

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            +Y+ ++ GLC    + EA  +F  M+E  Y+PD   +N L+    +      S+++ + 
Sbjct: 546 QSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEE 605

Query: 508 MIEKGQMPNETTYTILVE 525
           M   G   + +T  I+++
Sbjct: 606 MKRCGFSSDASTVKIVMD 623



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 176/362 (48%), Gaps = 1/362 (0%)

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P    ++ L     + +     + L   +  KG   +L + N+++   C+  +   A  
Sbjct: 87  LPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFS 146

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               +   G+EPN V++N LL  LC+EGR  EA EL+  M      P ++T N ++  L 
Sbjct: 147 AMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLC 206

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
              +   A+ ++  M+    +P+  +Y PI+ R+C  G     +  L +M HR+ KP+  
Sbjct: 207 LKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVV 266

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TY  +   LC  G++ +A +    +  K   +    Y  +I S C  G+     QLL +M
Sbjct: 267 TYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDM 326

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
                TP+  T+S+LI  L  EG + EA +++  M     +P+   +N+L+ GLC  +R 
Sbjct: 327 ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRL 386

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
           D + ++  +M+ KG  P+  TY IL+ G     +++    + +++ LR +++++     +
Sbjct: 387 DEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTL 446

Query: 559 MQ 560
           +Q
Sbjct: 447 IQ 448



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 154/314 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+DA      M +KG K +V    +L+   C   +     +++  M++  I 
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +++ L++ L K+G +  A  L  +M   G   NT+TYNSL+ GLC    L+++ Q 
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D ++ KG  P+ +TY+ L+    K + V   M+L   +  +G   + V+Y+ L+ G C+
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             +   A + F+++ S+G  P +++Y ILL  LC  G  EEA  +L +M        I  
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI+I  +    K D A  +   +     +    SYN +++ LC    +        +M 
Sbjct: 513 YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMK 572

Query: 371 HRRCKPNEGTYNGL 384
               +P+  TYN L
Sbjct: 573 EDGYEPDGCTYNTL 586



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 147/318 (46%), Gaps = 36/318 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +D    L  M+++   P+VV  + L+  L K  K+ +A  +   M++ GI P+  +Y 
Sbjct: 315 RWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYN 374

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC    +  A Q+++ M   G   +  TYN L+ G C    ++  ++   ++  +
Sbjct: 375 SLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLR 434

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++ +  TYS L++   + R +  A K+  +++++G  P +++Y +LL GLC  G  EEA
Sbjct: 435 GMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEA 494

Query: 258 I-----------------------------------RFFRDLPSKGFEPNVVSYNILLRS 282
           +                                     F  LPSKG + ++ SYNI+L  
Sbjct: 495 LGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSG 554

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC      EA+ L  +M      P   TYN LI +         ++++++EM +  F  S
Sbjct: 555 LCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGF-SS 613

Query: 343 AASYNPIIARLCSEGKVD 360
            AS   I+  + S G++D
Sbjct: 614 DASTVKIVMDMLSSGELD 631



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 139/298 (46%), Gaps = 3/298 (1%)

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + ++A+  F+ +      P V+ +N L   L    +++    L  +M+    +  + T N
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I+I       K   A   + ++ K  + P+  ++N ++  LC EG+V   V+ +D M   
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
           +  P+  T N +   LC   +V EA  +I  +       P +F Y  ++  +C+ G T  
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARM-MANGCQPNQFTYGPILNRMCKSGNTAS 248

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL +M      P   TY+ +I  LC +G +++AL  F  ME    K +V  +N+L+ 
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             C   R D   ++ + MI +   PN  T++ L++ +  + +L  + ++  E+  R +
Sbjct: 309 SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGI 366


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 260/526 (49%), Gaps = 53/526 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+H+ + A    + M+ K  +PD      LL  LC++N+++KA K++  M   G +PD +
Sbjct: 19  REHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDA 78

Query: 135 SYTYLVNCLCKKGNVGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y  L++   K  + G A + L E ++++  PT  VTY ++V GLC       +++ LD 
Sbjct: 79  IYNALISGYSKAKDFGQAFKFLAEMVKNHCLPT-VVTYTNIVDGLCKAERTRDAVKLLDE 137

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  KG  PN +TY+ ++E   +ER +  A K+L+++  +G  P++V+YN  + GLCK  R
Sbjct: 138 MRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 197

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EA +F   +P     P+VVSY  ++  LC  G  + A+ +L  M     +P +VTY+ 
Sbjct: 198 VDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSS 254

Query: 314 LIGSLAYHGKTDHALKVLDEMVK-----------------------GR------------ 338
           LI      G+ + A+ +LD M+K                       G+            
Sbjct: 255 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 314

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-----------L 387
           F P   SYN  I  LC   +V       D+M  R C PN  +Y+ L +           L
Sbjct: 315 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGL 374

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           C  G+  EA A+   + +++   P   FY  ++ S C++ +  +A Q+  +M +     +
Sbjct: 375 CKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-N 433

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             T++ L+ GLC++  + +A  + + M +  + PD   +  L+  +CK  ++  +LE+F+
Sbjct: 434 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 493

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             ++ G +P+  TY+ L+ G+ H++  E +  +  +L  R+ V + 
Sbjct: 494 EAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDD 539



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 231/453 (50%), Gaps = 16/453 (3%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G++ +V     LL  L + ++  KA  V + M+     PDA ++  L+  LC+   +  A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            +L+ +M++ G   +   YN+L+ G     +  Q+ +FL  +++   +P   TY+ +++ 
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K      A+KLLD++  KG  PN+ +YNV++ GLC+E + +EA +   ++  +G+ P+
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV+YN  ++ LC   R +EA + LA M     +P +V+Y  +I  L   G  D A ++LD
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVG 391
            M      P   +Y+ +I   C  G+V+  +  LD M    C+PN   YN  L  L  +G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            + +A  ++  +  +  +     Y   I  LC+  +  +A  +   M + G TP++ +YS
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 452 SLI----------RGLCMEGLIEEALEIFV-VMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            LI           GLC  G  +EA  +F  V++E   +PDV  +N +L   CK R+ D 
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           +L++ + M+EK    N  T+ ILV G+   D L
Sbjct: 419 ALQIHKQMLEK-NCCNVVTWNILVHGLCVDDRL 450



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 162/313 (51%), Gaps = 12/313 (3%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A   L+ M ++G  PDVV  ++L+   CK  ++++A+ +++ M+  G  P+  +Y  
Sbjct: 230 LDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 289

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L + G++G A  ++ +ME  G+  + V+YN+ + GLC    + ++    DR++++G
Sbjct: 290 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 349

Query: 199 LVPNAFTYSFL----------LEAAYKERGVHAAMKLLDDII-AKGGKPNLVSYNVLLTG 247
             PNA +YS L          L+   K      A  L   ++  K  +P++  YNV+L  
Sbjct: 350 CTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 409

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK  + ++A++  + +  K    NVV++NIL+  LC++ R  +A  +L  M      P 
Sbjct: 410 HCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPD 468

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            VTY  L+ ++   GK+  AL++ +E VKG   P   +Y+ +I  L  E   +       
Sbjct: 469 FVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT 528

Query: 368 QMFHRRCKPNEGT 380
           ++  RR  P++ T
Sbjct: 529 KLVERRWVPDDKT 541



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 48/251 (19%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY- 136
           K  D  +++ER   +G  PDVV     +  LCKA ++KKA  V + MV  G  P+ASSY 
Sbjct: 302 KAEDMLVEMER---RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 137 ---------TYLVNCLCKKGNVGYAMQLVEKMED--------YGYPT------------- 166
                    T L++ LCK G    A  L  K+ D        + Y               
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418

Query: 167 --------------NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
                         N VT+N LV GLC+   L+ +   L  ++ +G +P+  TY  L++A
Sbjct: 419 ALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 478

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K     AA++L ++ +  G  P++V+Y+ L+TGL  E   EEA   F  L  + + P+
Sbjct: 479 MCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPD 538

Query: 273 VVSYNILLRSL 283
             +  +L R L
Sbjct: 539 DKTLGLLHRKL 549



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 35/167 (20%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  ++  L R+ +  +A  +  EM      PD++T++ L+RGLC    +E+A ++   M+
Sbjct: 10  YNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMK 69

Query: 475 EYDYKPDVDNFNALLL-----------------------------------GLCKSRRTD 499
           E    PD   +NAL+                                    GLCK+ RT 
Sbjct: 70  EMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTR 129

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++++   M +KG  PN  TY ++VEG+  + +L+ + ++L+E+ +R
Sbjct: 130 DAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR 176



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H   +  D  LQ+ + + + +  +VV    L++ LC  +++  A  ++  MV  G IPD 
Sbjct: 410 HCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 469

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  LV+ +CK G    A++L E+    G   + VTY++L+ GL       ++     +
Sbjct: 470 VTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 529

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
           L+++  VP+  T   L          H  +KLL+
Sbjct: 530 LVERRWVPDDKTLGLL----------HRKLKLLN 553



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%)

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           Y+ +V  +N LLL L +  R D +  VFQ MI+K   P+  T+ IL+ G+   ++LE + 
Sbjct: 3   YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKAR 62

Query: 538 EVLKELQLRQVVSESAV 554
           ++L  ++    V + A+
Sbjct: 63  KLLGRMKEMGCVPDDAI 79



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 52/102 (50%)

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G+  + +TY+ L+  L  E   ++A  +F  M +   +PD   F  LL GLC+S + + +
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            ++   M E G +P++  Y  L+ G +   +   + + L E+
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 103


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 240/471 (50%), Gaps = 6/471 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + +++++A   LE M   G  PDV    ++++ LCK NK+  A K+++ M+  G  PD  
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR- 193
           +Y +L++ LC+ G +  A +++ K+     P N +  N+L+ G  M G L ++  FL+  
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKIP---CPNNAI-LNTLINGYVMSGQLKEAQSFLNET 380

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +I  G  P+ FTY+ L+    KE  +  A  L++++  +G +PN+++Y +L+ GLCK G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA     ++ ++G   N V YN L+ +LC + +   A  LL+EM      P + TYN 
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L    + D A ++   M+      +  +YN +I  L   G     +  ++ M  R 
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C  ++ TYNGL    C VG +++   + + +      +       +I  LC+ GK   AF
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           + L +    GF PD  TY+S++ GLC  G I+EAL +F  ++    +PD   +N  +   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           CK    + +   F   IE G +P+  T+ +LV  +  Q   E +  VL EL
Sbjct: 681 CKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 233/462 (50%), Gaps = 6/462 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SKG  P V     ++  LC  N++  A  ++  M   G +P++  Y  L++ L +K  
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A++L+E+M   G   +  T+N ++ GLC +  ++ + + +DR++ +G  P+  TY F
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD-LPSK 267
           LL    +   ++ A K+L  I      PN    N L+ G    G+ +EA  F  + + + 
Sbjct: 329 LLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF+P++ +YNIL+  LC EG    A +L+ EM      P ++TY IL+  L   G  + A
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
             VL EM       ++  YN +I  LC + KV + +  L +M  + CKP+  TYN L   
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC V ++ EAF +  ++      +    Y  +I +L R+G   +A  L+ +M   G T D
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ LI+  C  G IE+ LE++  M       D  + N ++ GLCK  + D + E  +
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             I +G +P+  TY  ++ G+     ++ +  +   LQ+  V
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 213/463 (46%), Gaps = 23/463 (4%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F+ + +   K  +P   QA  LL D+       +A+ + E        P   SY  ++  
Sbjct: 150 FMIIMKHYGKAGQPG--QAIRLLLDM-------RAVYLCE--------PTFKSYDLVLEI 192

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           L        A  +   M   G      T+  +++ LCM   ++ +   L  + + G VPN
Sbjct: 193 LVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPN 252

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           +  Y  L+ A  ++  V  A+KLL+++   G  P++ ++N ++ GLCK  +  +A +   
Sbjct: 253 SIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVD 312

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  +GF P+ ++Y  LL  LC  G+  EA ++L ++      P     N LI      G
Sbjct: 313 RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSG 368

Query: 323 KTDHALKVLDE-MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           +   A   L+E M+   F+P   +YN ++  LC EG +      +++M  R C+PN  TY
Sbjct: 369 QLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITY 428

Query: 382 NGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L   LC  G ++EA  ++  +  +  +     Y  +I +LCRK K + A  LL EM  
Sbjct: 429 AILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT 488

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD +TY+SLI GLC    I+EA  +F  M       +   +N L+  L +      
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +L +   M+ +G   ++ TY  L++       +E   E+ +++
Sbjct: 549 ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 187/425 (44%), Gaps = 34/425 (8%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           GY      Y   +  L  +G      + L ++ ++G+V     +  +++   K      A
Sbjct: 107 GYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQA 166

Query: 223 MKLLDDIIAKG-GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           ++LL D+ A    +P   SY+++L  L      + A   F D+ SKG  P V ++ I+++
Sbjct: 167 IRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMK 226

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           +LCM    + A  LL +M      P  + Y  LI +L+   +   ALK+L+EM      P
Sbjct: 227 ALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMP 286

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF--- 397
              ++N +I  LC   K+    K +D+M  R   P+  TY  L   LC +GK+ EA    
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346

Query: 398 --------AIIQSLGNK-----QNSSPQEF----------------YKYVITSLCRKGKT 428
                   AI+ +L N      Q    Q F                Y  ++  LC++G  
Sbjct: 347 IKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSL 406

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A  L+ EM++ G  P+  TY+ L+ GLC  GL+EEA  +   M       +   +N L
Sbjct: 407 SFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +  LC+  +  ++L +   M  KG  P+  TY  L+ G+   D ++ +  +   + L   
Sbjct: 467 ICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA 526

Query: 549 VSESA 553
           V+ + 
Sbjct: 527 VANNV 531



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 142/292 (48%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A L L  M ++G   + V    L+  LC+  K+  A+ ++  M + G  PD  +Y  
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  LCK   +  A +L   M   G   N VTYN+L+  L   G   ++L  ++ ++ +G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              +  TY+ L++A  K   +   ++L + +I  G   + +S N+++ GLCK G+ + A 
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F RD  ++GF P++V+YN +L  LC  GR +EA  L   +      P   TYN  I   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
              G  + A       ++  F PS  ++N ++  L  +   +     LD+++
Sbjct: 681 CKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 164/344 (47%), Gaps = 11/344 (3%)

Query: 218 GVHAAMKLLDDIIAKGGKPNLV----SYNVLLTGLCKEGRTEEAIRFFRDLPSKGF-EPN 272
           G     KL+D ++ +  +  +V     + +++    K G+  +AIR   D+ +    EP 
Sbjct: 123 GAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPT 182

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             SY+++L  L      + A  +  +M     SPT+ T+ I++ +L    + D A  +L 
Sbjct: 183 FKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLR 242

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
           +M K    P++  Y  +I  L  + +V   +K L++MF   C P+  T+N +   LC V 
Sbjct: 243 DMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN 302

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           K+ +A  ++  +  +        Y +++  LCR GK  +A ++L ++      P++   +
Sbjct: 303 KIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILN 358

Query: 452 SLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +LI G  M G ++EA       M  + ++PD+  +N L+ GLCK      + ++   M  
Sbjct: 359 TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR 418

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           +G  PN  TY ILV G+     LE +  VL E+  R +   S +
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 231/451 (51%), Gaps = 7/451 (1%)

Query: 100 QATNLLYDL-----CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK-KGNVGYAM 153
           ++++ ++DL      + N + KA+ ++ +  S G +P   SY  +++ + + K +V  A 
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            + ++M + G   N  TYN L+RG C  GNL   L F   + + G +PN  TY+ +++A 
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K R +  A KLL  +  KG  PNL+SYNV++ GLC+EG+ +E      ++  + + P+ 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V++N L+   C  G + +A  L AEM     SP +VTY  LI S+   G  + A++ LD+
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
           M      P+  +Y  +I     +G +    + + +M      P   TYN L    C +G+
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +++A  ++Q +  +        Y  +I+  CR  +  +AFQL  EM   G +PD  TYSS
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI+GLC +  + E  ++F  M      PD   + +L+   C     D +L +   MI+KG
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             P+  TY +L+ G   Q   + +  +L +L
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 252/495 (50%), Gaps = 23/495 (4%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F ++ER    G  P+VV    ++   CK  K+ +A K++ +M   G+ P+  SY  ++N 
Sbjct: 226 FGEMER---NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LC++G +    +++E+M    Y  + VT+N+L+ G C +GN +Q+L     +++ GL PN
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+ +  K   ++ AM+ LD +  +G  PN  +Y  L+ G  ++G  ++A +  +
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++   GF P +++YN L+   C+ GR E+A+ LL EM      P +V+Y+ +I     + 
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + + A ++  EMV     P  A+Y+ +I  LC + ++  V     +M      P+E TY 
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L    C  G + +A  +   +  K  S     Y  +I    ++ +T +A +LL ++   
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 442 GFTPDSYTYSSLI---------------RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              P+  TY++LI               +G CM+GL+ EA  +   M +  YK + + +N
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ-DELELSAEVLKELQL 545
            ++ G  K    + +  +++ M+  G  P+  T   L + + H+  E+EL+   L +  L
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQ--LLDYTL 700

Query: 546 RQV-VSESAVERLVM 559
           +   ++E+A+ ++++
Sbjct: 701 KSCRITEAALAKVLI 715



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 228/478 (47%), Gaps = 24/478 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + MV  G  P+V     L+   C A  ++  +     M  +G +P+  +Y  +++  CK
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +G A +L+  M   G   N ++YN ++ GLC  G + ++ + L+ + ++  VP+  T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+         H A+ L  +++  G  PN+V+Y  L+  +CK G    A+ F   + 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G  PN  +Y  L+     +G  ++A +++ EM     +PTI+TYN LI      G+ +
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L EM++  F P   SY+ II+  C   +++   +   +M  +   P+  TY+ L 
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490

Query: 386 M-LCG---VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTK 440
             LC    +G+V + F  + SLG      P E  Y  +I + C +G   +A +L  EM +
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLG----LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFV-------VMEEYDYKPDVDNFN------- 486
            GF+PD  TY+ LI G   +   +EA  + +       V  E  Y   +DN N       
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606

Query: 487 -ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            AL+ G C     + +  V + M++KG   NE  Y +++ G +    +E +  + KE+
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEM 664



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 197/403 (48%), Gaps = 16/403 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ +    LE M  + + PD V    L+   C      +A+ +   MV +G+ P+  
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+N +CK GN+  AM+ +++M D G   N  TY +L+ G    G L Q+ Q +  +
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P   TY+ L+        +  A  LL ++I +G  P++VSY+ +++G C+    
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A +   ++ +KG  P+V +Y+ L++ LC + R  E  +L  EM      P  VTY  L
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G  D AL++ DEM++  F P   +YN +I     + +     + L ++ +   
Sbjct: 525 INAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584

Query: 375 KPNEGTYN-------------GLAML---CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
            PNE TYN              LA++   C  G + EA  +++S+  K     +E Y  +
Sbjct: 585 VPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVI 644

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           I    + G   +A+ L  EM   GF P S T  +L + L  EG
Sbjct: 645 IHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEG 687



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 179/361 (49%), Gaps = 8/361 (2%)

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF---- 260
            +  ++++  +   ++ A+ +++   + G  P ++SYN +L  +    RT+++++     
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVI---RTKQSVKIAEGI 190

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F+++   G  PNV +YNIL+R  C  G  E       EM+     P +VTYN +I +   
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K   A K+L  M      P+  SYN +I  LC EG++    + L++M  RR  P+  T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +N L    C VG   +A  +   +     S     Y  +I S+C+ G   +A + L +M 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  P+  TY++LI G   +G +++A +I   M E  + P +  +NAL+ G C   R +
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            +  + Q MIE+G +P+  +Y+ ++ G     ELE + ++  E+  + +  + A    ++
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490

Query: 560 Q 560
           Q
Sbjct: 491 Q 491



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 58/272 (21%)

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD-----QMFHRRCKPNE---------- 378
           ++   F P A+S N ++    S+    LV+K LD     Q F  +CK             
Sbjct: 40  LLSSHFTPQASS-NLLLK---SQFDSSLVLKFLDWARSQQFFSFQCKCLALHILTRYKLY 95

Query: 379 GTYNGLAMLCGVGKVQEAFA-IIQSLGNK--QNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            T   LA    V  V E    + Q L N   Q  S    +  V+ S  R     +A  ++
Sbjct: 96  KTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIV 155

Query: 436 YEMTKYGFTPD------------------------------------SYTYSSLIRGLCM 459
                YGF P                                      YTY+ LIRG C 
Sbjct: 156 NLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCT 215

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G +E  L  F  ME     P+V  +N ++   CK R+   + ++ ++M  KG  PN  +
Sbjct: 216 AGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLIS 275

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           Y +++ G+  + +++ ++E+L+E+  R+ V +
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSKRRYVPD 307


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 236/450 (52%), Gaps = 9/450 (2%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L++  C  N+  +AI+V+  M   G  PD  +Y  +++ LCKKG +  A  L+  M++ G
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  T+N LV G C LG L ++   ++ + Q  +VP+A+TY+ ++    K+  +  AM
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM 322

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L +++      P++V+YN L+ G  + G +EE  +   ++  +G +PN V+YN++++  
Sbjct: 323 RLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWF 382

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             +G+ +E ++ + +M+     P IVTYN LI      GK D A +++DEM +   +   
Sbjct: 383 VKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDD 442

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG-----KVQEAFA 398
            + N ++  LC E K+D     L     R    +E +Y  L     +G     K  +A  
Sbjct: 443 VTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLI----IGYFKHEKASQALR 498

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +   +  K+       Y  +I  LC+ GKT QA   L E+ + G  PD  TY+++I G C
Sbjct: 499 LWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYC 558

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            EG +E+A +    M E ++KPDV   N LL GLCK    + +L++F   I KG+  +  
Sbjct: 559 QEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAV 618

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +Y  ++  +  +     + ++L+E++ +++
Sbjct: 619 SYNTIILSLCKEKRFGEAFDLLEEMEEKKL 648



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 227/441 (51%), Gaps = 1/441 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +LN+A   L  M +KG  P+      L+   C+   +K+A  V+E+M  + ++PDA +Y 
Sbjct: 247 RLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYN 306

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK+G +  AM+L E+ME+     + VTYN+L+ G    G+  +  + ++ +  +
Sbjct: 307 VMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGR 366

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN+ TY+ +++   K+  +    K +  +   G  P++V+YN L++  CK G+ +EA
Sbjct: 367 GMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEA 426

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R   ++  KG + + V+ N +LR+LC E + +EA++LL            V+Y  LI  
Sbjct: 427 FRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIG 486

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              H K   AL++ DEM +    PS  +YN +IA LC  GK +  +  LD++      P+
Sbjct: 487 YFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPD 546

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           E TYN +    C  G+V++AF     +  K           ++  LC++G   +A +L  
Sbjct: 547 EITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFN 606

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
                G   D+ +Y+++I  LC E    EA ++   MEE    PD   +NA+L GL  + 
Sbjct: 607 TWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAG 666

Query: 497 RTDLSLEVFQMMIEKGQMPNE 517
           R   + E    + EKG+  N+
Sbjct: 667 RMKDAEEFISKIAEKGKSENQ 687



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 159/304 (52%), Gaps = 23/304 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++AF  ++ M  KG K D V    +L  LC+  K+ +A  ++      G   D  SY 
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG 481

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+    K      A++L ++M++     + +TYNS++ GLC +G  NQ++  LD L++ 
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLES 541

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLVP+  TY+ ++    +E  V  A +  + ++ K  KP++V+ N LL GLCKEG  E+A
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKA 601

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F    SKG + + VSYN ++ SLC E R+ EA +LL EM+     P   TYN ++G 
Sbjct: 602 LKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGG 661

Query: 318 LAYHGKTDHALKVLDEMV-KGRF----------------------RPSAASYNPIIARLC 354
           L   G+   A + + ++  KG+                        P+A +Y+  I  LC
Sbjct: 662 LTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELC 721

Query: 355 SEGK 358
           S+G+
Sbjct: 722 SQGR 725



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           + F  +E M  +G KP+ V    ++    K  KM +  K +  M  SG +PD  +Y  L+
Sbjct: 355 EGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLI 414

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +  CK G +  A +L+++M   G   + VT N+++R LC    L+++   L    ++G  
Sbjct: 415 SWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYF 474

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            +  +Y  L+   +K      A++L D++  K   P++++YN ++ GLC+ G+T +AI  
Sbjct: 475 VDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDK 534

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             +L   G  P+ ++YN ++   C EG+ E+A +   +M   +  P +VT N L+  L  
Sbjct: 535 LDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCK 594

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G  + ALK+ +  +       A SYN II  LC E +       L++M  ++  P+  T
Sbjct: 595 EGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYT 654

Query: 381 YNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN  L  L   G++++A   I  +  K  S  Q    ++     +  +T +  Q  +   
Sbjct: 655 YNAILGGLTDAGRMKDAEEFISKIAEKGKSENQ----FLELGKRQDARTSEIPQEPH--- 707

Query: 440 KYGFTPDSYTYSSLIRGLCMEG 461
                P++  YS+ I  LC +G
Sbjct: 708 -----PNAIAYSNKINELCSQG 724



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 177/372 (47%), Gaps = 4/372 (1%)

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA---AMKLLDDIIAKGGKPNL 238
           G  +Q+ Q  +R+ + G+ P   T + LL A  +    H+   +  +  D I  G K N 
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINT 197

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            S+N+L+ G C E R  EAIR    +   G  P+ ++YN +L  LC +GR  EA +LL +
Sbjct: 198 NSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P   T+NIL+      G    A  V++ M +    P A +YN +I+  C +G+
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +   ++  ++M + +  P+  TYN L   C   G  +E F +I+ +  +        Y  
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++    +KGK  +  + + +M + G  PD  TY++LI   C  G ++EA  +   M    
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            K D    N +L  LC+ R+ D + ++      +G   +E +Y  L+ G    ++   + 
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497

Query: 538 EVLKELQLRQVV 549
            +  E++ ++++
Sbjct: 498 RLWDEMKEKEII 509



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 117/240 (48%), Gaps = 23/240 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K + A    + M  K   P ++   +++  LC+  K  +AI  ++ ++ SG++PD  
Sbjct: 489 KHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEI 548

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  C++G V  A Q   KM +  +  + VT N+L+ GLC  G L ++L+  +  
Sbjct: 549 TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTW 608

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I KG   +A +Y+ ++ +  KE+    A  LL+++  K   P+  +YN +L GL   GR 
Sbjct: 609 ISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRM 668

Query: 255 EEAIRFFRDLPSKGF-----------------------EPNVVSYNILLRSLCMEGRWEE 291
           ++A  F   +  KG                         PN ++Y+  +  LC +GR+++
Sbjct: 669 KDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGRYKD 728



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 118/279 (42%), Gaps = 39/279 (13%)

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK----VLDEMVKGRFRPS 342
           GR  +A ++   M      PT++T N L+ +L     + H+++    V  + +K   + +
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRF-PSSHSIRLSKAVFTDFIKIGVKIN 196

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
             S+N +I   C E +    ++ L +M    C P+  TYN                    
Sbjct: 197 TNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNT------------------- 237

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
                          ++  LC+KG+  +A  LL +M   G  P+  T++ L+ G C  G 
Sbjct: 238 ---------------ILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGW 282

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++EA  +  +M +    PD   +N ++ G CK  R   ++ + + M      P+  TY  
Sbjct: 283 LKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNT 342

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           L+ G       E   ++++E++ R +   S    +++++
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKW 381


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 240/471 (50%), Gaps = 6/471 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + +++++A   LE M   G  PDV    ++++ LCK NK+  A K+++ M+  G  PD  
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR- 193
           +Y +L++ LC+ G +  A +++ K+     P N +  N+L+ G  M G L ++  FL+  
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKIP---CPNNAI-LNTLINGYVMSGQLKEAQSFLNET 380

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +I  G  P+ FTY+ L+    KE  +  A  L++++  +G +PN+++Y +L+ GLCK G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA     ++ ++G   N V YN L+ +LC + +   A  LL+EM      P + TYN 
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L    + D A ++   M+      +  +YN +I  L   G     +  ++ M  R 
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C  ++ TYNGL    C VG +++   + + +      +       +I  LC+ GK   AF
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           + L +    GF PD  TY+S++ GLC  G I+EAL +F  ++    +PD   +N  +   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           CK    + +   F   IE G +P+  T+ +LV  +  Q   E +  VL EL
Sbjct: 681 CKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 233/462 (50%), Gaps = 6/462 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SKG  P V     ++  LC  N++  A  ++  M   G +P++  Y  L++ L +K  
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A++L+E+M   G   +  T+N ++ GLC +  ++ + + +DR++ +G  P+  TY F
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD-LPSK 267
           LL    +   ++ A K+L  I      PN    N L+ G    G+ +EA  F  + + + 
Sbjct: 329 LLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF+P++ +YNIL+  LC EG    A +L+ EM      P ++TY IL+  L   G  + A
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
             VL EM       ++  YN +I  LC + KV + +  L +M  + CKP+  TYN L   
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC V ++ EAF +  ++      +    Y  +I +L R+G   +A  L+ +M   G T D
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ LI+  C  G IE+ LE++  M       D  + N ++ GLCK  + D + E  +
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             I +G +P+  TY  ++ G+     ++ +  +   LQ+  V
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 213/463 (46%), Gaps = 23/463 (4%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F+ + +   K  +P   QA  LL D+       +A+ + E        P   SY  ++  
Sbjct: 150 FMIIMKHYGKAGQPG--QAIRLLLDM-------RAVYLCE--------PTFKSYDLVLEI 192

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           L        A  +   M   G      T+  +++ LCM   ++ +   L  + + G VPN
Sbjct: 193 LVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPN 252

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           +  Y  L+ A  ++  V  A+KLL+++   G  P++ ++N ++ GLCK  +  +A +   
Sbjct: 253 SIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVD 312

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  +GF P+ ++Y  LL  LC  G+  EA ++L ++      P     N LI      G
Sbjct: 313 RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSG 368

Query: 323 KTDHALKVLDE-MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           +   A   L+E M+   F+P   +YN ++  LC EG +      +++M  R C+PN  TY
Sbjct: 369 QLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITY 428

Query: 382 NGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L   LC  G ++EA  ++  +  +  +     Y  +I +LCRK K + A  LL EM  
Sbjct: 429 AILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCT 488

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD +TY+SLI GLC    I+EA  +F  M       +   +N L+  L +      
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +L +   M+ +G   ++ TY  L++       +E   E+ +++
Sbjct: 549 ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 187/425 (44%), Gaps = 34/425 (8%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           GY      Y   +  L  +G      + L ++ ++G+V     +  +++   K      A
Sbjct: 107 GYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQA 166

Query: 223 MKLLDDIIAKG-GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           ++LL D+ A    +P   SY+++L  L      + A   F D+ SKG  P V ++ I+++
Sbjct: 167 IRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMK 226

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           +LCM    + A  LL +M      P  + Y  LI +L+   +   ALK+L+EM      P
Sbjct: 227 ALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMP 286

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF--- 397
              ++N +I  LC   K+    K +D+M  R   P+  TY  L   LC +GK+ EA    
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346

Query: 398 --------AIIQSLGNK-----QNSSPQEF----------------YKYVITSLCRKGKT 428
                   AI+ +L N      Q    Q F                Y  ++  LC++G  
Sbjct: 347 IKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSL 406

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A  L+ EM++ G  P+  TY+ L+ GLC  GL+EEA  +   M       +   +N L
Sbjct: 407 SFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +  LC+  +  ++L +   M  KG  P+  TY  L+ G+   D ++ +  +   + L   
Sbjct: 467 ICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA 526

Query: 549 VSESA 553
           V+ + 
Sbjct: 527 VANNV 531



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 142/292 (48%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A L L  M ++G   + V    L+  LC+  K+  A+ ++  M + G  PD  +Y  
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  LCK   +  A +L   M   G   N VTYN+L+  L   G   ++L  ++ ++ +G
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              +  TY+ L++A  K   +   ++L + +I  G   + +S N+++ GLCK G+ + A 
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F RD  ++GF P++V+YN +L  LC  GR +EA  L   +      P   TYN  I   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
              G  + A       ++  F PS  ++N ++  L  +   +     LD+++
Sbjct: 681 CKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 164/344 (47%), Gaps = 11/344 (3%)

Query: 218 GVHAAMKLLDDIIAKGGKPNLV----SYNVLLTGLCKEGRTEEAIRFFRDLPSKGF-EPN 272
           G     KL+D ++ +  +  +V     + +++    K G+  +AIR   D+ +    EP 
Sbjct: 123 GAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPT 182

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             SY+++L  L      + A  +  +M     SPT+ T+ I++ +L    + D A  +L 
Sbjct: 183 FKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLR 242

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
           +M K    P++  Y  +I  L  + +V   +K L++MF   C P+  T+N +   LC V 
Sbjct: 243 DMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN 302

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           K+ +A  ++  +  +        Y +++  LCR GK  +A ++L ++      P++   +
Sbjct: 303 KIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILN 358

Query: 452 SLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +LI G  M G ++EA       M  + ++PD+  +N L+ GLCK      + ++   M  
Sbjct: 359 TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR 418

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           +G  PN  TY ILV G+     LE +  VL E+  R +   S +
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 249/538 (46%), Gaps = 71/538 (13%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++DA      MV     P +V+   LL  + K NK +  I + E M + GI  D  +Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             +NC C++  +  A+ ++ KM   GY  + VT +SL+ G C    ++ ++  +D++++ 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG----- 252
           G  P+ FT++ L+   +       A+ L+D ++ +G +P+LV+Y  ++ GLCK G     
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 253 ------------------------------RTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                                           ++A+  F ++ +KG  P+V +Y+ L+  
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  GRW +A+ LL++M     +P +VT++ LI +    GK   A K+ DEM+K    P 
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             +Y+ +I   C   ++D      + M  + C PN  TY+ L    C   +V+E   + +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 402 SL------GN--------------KQNSSPQEFYKYVIT---------------SLCRKG 426
            +      GN              +   + Q  +K +++                LC+ G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           K  +A  +   + +    PD YTY+ +I G+C  G +E+  E+F  +      P+V  +N
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            ++ G C+    + +  + + M E G +PN  TY  L+       + E SAE++KE++
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 211/440 (47%), Gaps = 36/440 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA   +++MV  G+KPD    T L++ L   NK  +A+ +++ MV  G  PD  +Y 
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VN LCK+G++  A+ L++KME      + V YN+++ GLC   +++ +L     +  K
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287

Query: 198 GLVPNAFTYS-----------------------------------FLLEAAYKERGVHAA 222
           G+ P+ FTYS                                    L++A  KE  +  A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            KL D++I +   P++ +Y+ L+ G C   R +EA   F  + SK   PNVV+Y+ L++ 
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C   R EE  EL  EM         VTY  LI         D+A  V  +MV     P+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQ 401
             +YN ++  LC  GK+   +   + +     +P+  TYN  +  +C  GKV++ + +  
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           +L  K  S     Y  +I+  CRKG   +A  LL +M + G  P+S TY++LIR    +G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587

Query: 462 LIEEALEIFVVMEEYDYKPD 481
             E + E+   M    +  D
Sbjct: 588 DREASAELIKEMRSCGFAGD 607



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 175/372 (47%), Gaps = 3/372 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           ++ ++     +++    P+   ++ LL A  K       + L + +   G   +L +Y++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
            +   C+  +   A+     +   G+EP++V+ + LL   C   R  +A  L+ +M    
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P   T+  LI  L  H K   A+ ++D+MV+   +P   +Y  ++  LC  G +DL +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
             L +M   + + +   YN +   LC    + +A  +   + NK    P  F Y  +I+ 
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISC 302

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC  G+   A +LL +M +    P+  T+S+LI     EG + EA +++  M +    PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           +  +++L+ G C   R D +  +F++MI K   PN  TY+ L++G      +E   E+ +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 542 ELQLRQVVSESA 553
           E+  R +V  + 
Sbjct: 423 EMSQRGLVGNTV 434



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + M+ +   PD+   ++L+   C  +++ +A  + E+M+S    
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L+   CK   V   M+L  +M   G   NTVTY +L+ G     + + +   
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             +++  G+ PN  TY+ LL+   K   +  AM + + +     +P++ +YN+++ G+CK
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+    F +L  KG  PNV++YN ++   C +G  EEA+ LL +M      P   T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YN LI +    G  + + +++ EM    F   A++   ++  +  +G++D
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 624



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 48/292 (16%)

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           +L   G  P V S+     +LC  G WE +    A   G  R        IL   L+   
Sbjct: 17  NLQGIGNPPTVPSF----FNLCGSGCWERS---FASASGDYRE-------ILRNRLSDII 62

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  +MVK R  PS   +N +++ +    K +LV+   +QM             
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM------------- 109

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
                             Q+LG   +      Y   I   CR+ +   A  +L +M K G
Sbjct: 110 ------------------QTLGISHDLYT---YSIFINCFCRRSQLSLALAVLAKMMKLG 148

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           + PD  T SSL+ G C    I +A+ +   M E  YKPD   F  L+ GL    +   ++
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +   M+++G  P+  TY  +V G+  + +++L+  +LK+++  ++ ++  +
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 240/476 (50%), Gaps = 2/476 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA   L  M   G  PD V    LL   C+   + +A  ++  M   GI P   +Y  
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ-K 197
           LV+   + G +  A ++VE M  YG+  +  TYN L  GLC  G ++++ +  D + +  
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLS 343

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +P+  TY+ L++A +K R    A++LL+++  KG KP LV++N+++  LCKEG+ EEA
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     +  +G  P+V++YN L+ + C  G   +A  L+ EM G        T N ++ +
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + + A ++L    +  F P   SY  ++A    E   +  ++  DQM  R+  P+
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L   LC + +++EA   +  L  K     +  Y  +I + C++G    AF+   
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M +  F PD  T ++L+ GLC+ G +++AL++F    E   K DV  +N L+  +CK  
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             D +L  F  M  KG  P+  TY +++  ++     E +  +L +L     +S+S
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 165/607 (27%), Positives = 257/607 (42%), Gaps = 84/607 (13%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSL------NKGFIRVLASTQVTISP 54
           ++ L  S STL   S + FR         PN ++F+L      +KG    LA    T+S 
Sbjct: 178 LSALSRSPSTLPQASLDVFRSLIELRLH-PNHYTFNLLVHTHCSKG---TLADALATLST 233

Query: 55  KDSVYTKPNRKPGNNNDTRH-RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK 113
                  P+    N     H R   L +A   L RM   G  P       L+    +   
Sbjct: 234 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGW 293

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV------------------------ 149
           +K+A KV+E M + G  PD  +Y  L   LC+ G V                        
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYN 353

Query: 150 ------------GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
                         A++L+E+M D G     VT+N +V+ LC  G L ++L  L+++ ++
Sbjct: 354 TLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE 413

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+  TY+ L++A  K   V  A  L+D+++ KG K +  + N +L  LCK  R E+A
Sbjct: 414 GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDA 473

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                  P +GF P+ VSY  ++ +   E   E A  L  +M      P+I TYN LI  
Sbjct: 474 EELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKG 533

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    +   A+  L+E+V+    P   +YN II   C EG ++   +  ++M     KP+
Sbjct: 534 LCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T N L   LC  GK+ +A  + +S   K        Y  +I S+C+ G    A     
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFD 653

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-------------------------V 471
           +M   G  PD++TY+ ++  L   G  EEA  +                           
Sbjct: 654 DMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEA 713

Query: 472 VMEEYDYKPDVDNF-----NAL------LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            ++E++ KP+ ++      NAL      L GLC   +   +  V   M++KG   + +TY
Sbjct: 714 DVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTY 773

Query: 521 TILVEGI 527
             L+EG+
Sbjct: 774 ITLMEGL 780



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 161/360 (44%), Gaps = 5/360 (1%)

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRT--EEAIRFFRDLPS 266
           L A  + R  H A +LL  +  + G +P+L + N +L+ L +   T  + ++  FR L  
Sbjct: 142 LSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE 201

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               PN  ++N+L+ + C +G   +A   L+ M G   SP  VTYN L+ +    G    
Sbjct: 202 LRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGE 261

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A  +L  M +    P+  +YN +++     G +    K ++ M     +P+  TYN LA+
Sbjct: 262 ARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAV 321

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK-TYQAFQLLYEMTKYGFT 444
            LC  GKV EAF +   +     + P       +   C K + +  A +LL EM   G  
Sbjct: 322 GLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVK 381

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P   T++ +++ LC EG +EEAL     + E    PDV  +N L+   CK+     +  +
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
              M+ KG   +  T   ++  +      E + E+L     R  V +      VM   F+
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 231/451 (51%), Gaps = 7/451 (1%)

Query: 100 QATNLLYDL-----CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK-KGNVGYAM 153
           ++++ ++DL      + N + KA+ ++ +  S G +P   SY  +++ + + K +V  A 
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            + ++M + G   N  TYN L+RG C  GNL   L F   + + G +PN  TY+ +++A 
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K R +  A KLL  +  KG  PNL+SYNV++ GLC+EG+ +E      ++  + + P+ 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V++N L+   C  G + +A  L AEM     SP +VTY  LI S+   G  + A++ LD+
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
           M      P+  +Y  +I     +G +    + + +M      P   TYN L    C +G+
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +++A  ++Q +  +        Y  +I+  CR  +  +AFQL  EM   G +PD  TYSS
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI+GLC +  + E  ++F  M      PD   + +L+   C     D +L +   MI+KG
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             P+  TY +L+ G   Q   + +  +L +L
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 252/495 (50%), Gaps = 23/495 (4%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F ++ER    G  P+VV    ++   CK  K+ +A K++ +M   G+ P+  SY  ++N 
Sbjct: 226 FGEMER---NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LC++G +    +++E+M    Y  + VT+N+L+ G C +GN +Q+L     +++ GL PN
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+ +  K   ++ AM+ LD +  +G  PN  +Y  L+ G  ++G  ++A +  +
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++   GF P +++YN L+   C+ GR E+A+ LL EM      P +V+Y+ +I     + 
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + + A ++  EMV     P  A+Y+ +I  LC + ++  V     +M      P+E TY 
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L    C  G + +A  +   +  K  S     Y  +I    ++ +T +A +LL ++   
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 442 GFTPDSYTYSSLI---------------RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              P+  TY++LI               +G CM+GL+ EA  +   M +  YK + + +N
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ-DELELSAEVLKELQL 545
            ++ G  K    + +  +++ M+  G  P+  T   L + + H+  E+EL+   L +  L
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQ--LLDYTL 700

Query: 546 RQV-VSESAVERLVM 559
           +   ++E+A+ ++++
Sbjct: 701 KSCRITEAALAKVLI 715



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 228/478 (47%), Gaps = 24/478 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + MV  G  P+V     L+   C A  ++  +     M  +G +P+  +Y  +++  CK
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +G A +L+  M   G   N ++YN ++ GLC  G + ++ + L+ + ++  VP+  T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+         H A+ L  +++  G  PN+V+Y  L+  +CK G    A+ F   + 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G  PN  +Y  L+     +G  ++A +++ EM     +PTI+TYN LI      G+ +
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L EM++  F P   SY+ II+  C   +++   +   +M  +   P+  TY+ L 
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490

Query: 386 M-LCG---VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTK 440
             LC    +G+V + F  + SLG      P E  Y  +I + C +G   +A +L  EM +
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLG----LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFV-------VMEEYDYKPDVDNFN------- 486
            GF+PD  TY+ LI G   +   +EA  + +       V  E  Y   +DN N       
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606

Query: 487 -ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            AL+ G C     + +  V + M++KG   NE  Y +++ G +    +E +  + KE+
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEM 664



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 197/403 (48%), Gaps = 16/403 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ +    LE M  + + PD V    L+   C      +A+ +   MV +G+ P+  
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+N +CK GN+  AM+ +++M D G   N  TY +L+ G    G L Q+ Q +  +
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P   TY+ L+        +  A  LL ++I +G  P++VSY+ +++G C+    
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A +   ++ +KG  P+V +Y+ L++ LC + R  E  +L  EM      P  VTY  L
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G  D AL++ DEM++  F P   +YN +I     + +     + L ++ +   
Sbjct: 525 INAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEES 584

Query: 375 KPNEGTYN-------------GLAML---CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
            PNE TYN              LA++   C  G + EA  +++S+  K     +E Y  +
Sbjct: 585 VPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVI 644

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           I    + G   +A+ L  EM   GF P S T  +L + L  EG
Sbjct: 645 IHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEG 687



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 179/361 (49%), Gaps = 8/361 (2%)

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF---- 260
            +  ++++  +   ++ A+ +++   + G  P ++SYN +L  +    RT+++++     
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVI---RTKQSVKIAEGI 190

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F+++   G  PNV +YNIL+R  C  G  E       EM+     P +VTYN +I +   
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K   A K+L  M      P+  SYN +I  LC EG++    + L++M  RR  P+  T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +N L    C VG   +A  +   +     S     Y  +I S+C+ G   +A + L +M 
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  P+  TY++LI G   +G +++A +I   M E  + P +  +NAL+ G C   R +
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            +  + Q MIE+G +P+  +Y+ ++ G     ELE + ++  E+  + +  + A    ++
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490

Query: 560 Q 560
           Q
Sbjct: 491 Q 491



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 58/272 (21%)

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD-----QMFHRRCKPNE---------- 378
           ++   F P A+S N ++    S+    LV+K LD     Q F  +CK             
Sbjct: 40  LLSSHFTPQASS-NLLLK---SQFDSSLVLKFLDWARSQQFFSFQCKCLALHILTRYKLY 95

Query: 379 GTYNGLAMLCGVGKVQEAFA-IIQSLGNK--QNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            T   LA    V  V E    + Q L N   Q  S    +  V+ S  R     +A  ++
Sbjct: 96  KTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIV 155

Query: 436 YEMTKYGFTPD------------------------------------SYTYSSLIRGLCM 459
                YGF P                                      YTY+ LIRG C 
Sbjct: 156 NLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCT 215

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G +E  L  F  ME     P+V  +N ++   CK R+   + ++ ++M  KG  PN  +
Sbjct: 216 AGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLIS 275

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           Y +++ G+  + +++ ++E+L+E+  R+ V +
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSKRRYVPD 307


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 247/511 (48%), Gaps = 37/511 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  + +A    + M+++G K +VV    ++  + KA +M KA+ +   M+ +G+ PD  
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTW 417

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++   K  ++  A +L+ +M+      +  TY+ L+ GLC   +L ++ + LD++
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ G+ PN F Y  L++A  +E     A++LL  +IA G  P+L  YN L+ GLC+  + 
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKV 537

Query: 255 EEAI-----------------------------------RFFRDLPSKGFEPNVVSYNIL 279
           EEA                                    R+F+D+ S G  PN V Y IL
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           ++  C  G   EA      M      P I  Y+ +I SL+ +GKT  A+ V  + +K   
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
            P    YN +I+  C EG ++   +  D+M H    PN   YN L   LC +G+V +A  
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARE 717

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +   +  K        Y  +I   C+ G   +AF+L  EM   G +PD Y Y  LI G  
Sbjct: 718 LFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCG 777

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            EG +E+AL +F   ++      +  FN+L+   CK  +   + E+F  M++K   PN  
Sbjct: 778 KEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 836

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           TYTIL++     + +E + ++  +++ R ++
Sbjct: 837 TYTILIDAYGKAEMMEEAEQLFLDMETRNII 867



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 245/515 (47%), Gaps = 37/515 (7%)

Query: 81  DAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D  L++++ M+ KG  PD    T L+   CK  + K+A  + E M SSG+ P+  +YT L
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++   K+GN+  A+++ ++M   G   N VTYN+++ G+   G + +++   + ++  GL
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+ +TY+ L++   K   +  A +LL ++ A+   P+  +Y+VL++GLC     ++A  
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               +   G +PNV  Y  L+++   E R+E A ELL  M      P +  YN LI  L 
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
              K + A  +L +M +   +P+A +Y   I      G++ +  +    M      PN  
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 380 TYNGLAM-LCGVGKVQEAF-------------------AIIQSLGN-------------- 405
            Y  L    C VG   EA                    AII SL                
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652

Query: 406 -KQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
            K    P  F Y  +I+  C++G   +A QL  EM   G  P+   Y++LI GLC  G +
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEV 712

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            +A E+F  +EE D  PDV  ++ ++ G CKS     + ++F  MI KG  P+   Y IL
Sbjct: 713 TKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 772

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
           ++G   +  LE +  +  E Q + V S SA   L+
Sbjct: 773 IDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLI 807



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 242/501 (48%), Gaps = 37/501 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           LN+A       +S+G  P ++   NL+ DL KAN M    KV   MV + I+PD  +YT 
Sbjct: 188 LNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTN 247

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK- 197
           ++   CK G+V     ++ +ME    P N  TYN+ + GLC  G ++++L+    +++K 
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEMEKECKP-NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG 306

Query: 198 ----------------------------------GLVPNAFTYSFLLEAAYKERGVHAAM 223
                                             GL PN FTY+ L++   KE  +  A+
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           ++ D++I +G K N+V+YN ++ G+ K G   +A+  F ++   G EP+  +YN+L+   
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGY 426

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
                  +A ELLAEM     +P+  TY++LI  L +      A +VLD+M++   +P+ 
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
             Y  +I     E + ++ ++ L  M      P+   YN L + LC   KV+EA  ++  
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +G K        Y   I    + G+   A +   +M   G  P++  Y+ LI+G C  G 
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
             EAL  F  M E    PD+  ++A++  L K+ +T  ++ VF   ++ G +P+   Y  
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666

Query: 523 LVEGIAHQDELELSAEVLKEL 543
           L+ G   + ++E ++++  E+
Sbjct: 667 LISGFCKEGDIEKASQLYDEM 687



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 226/478 (47%), Gaps = 11/478 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L++M+  G KP+V     L+    + ++ + AI+++++M+++G++PD   Y  L+  LC+
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR 533

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A  L+  M + G   N  TY + +      G +  + ++   ++  G+VPN   
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++          A+     ++ KG  P++ +Y+ ++  L K G+T+EA+  F    
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+V  YN L+   C EG  E+A++L  EM     +P IV YN LI  L   G+  
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++ DE+ +    P   +Y+ II   C  G +    K  D+M  +   P+   Y  L 
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773

Query: 386 MLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             CG  G +++A ++      K   S   F   +I S C+ GK  +A +L  +M     T
Sbjct: 774 DGCGKEGNLEKALSLFHEAQQKSVGSLSAF-NSLIDSFCKHGKVIEARELFDDMVDKKLT 832

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  TY+ LI       ++EEA ++F+ ME  +  P+   + +LLL   +       + +
Sbjct: 833 PNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISL 892

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           F+ M  +G   +   Y ++      +          K L+  +++++S VE + ++ D
Sbjct: 893 FKDMEARGIACDAIAYGVMASAYCKEG---------KSLEALKLLNKSLVEGIKLEDD 941



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 212/475 (44%), Gaps = 36/475 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M++ G  PD+     L+  LC+A K+++A  ++  M   GI P+A +Y   +N   K
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +  + M   G   N V Y  L++G C +GN  ++L     +++KGL+P+   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS ++ +  K      AM +    +  G  P++  YN L++G CKEG  E+A + + ++ 
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PN+V YN L+  LC  G   +A EL  E++  D  P +VTY+ +I      G   
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLT 748

Query: 326 HALKVLDEMVKGRFRP----------------------------------SAASYNPIIA 351
            A K+ DEM+     P                                  S +++N +I 
Sbjct: 749 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLID 808

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
             C  GKV    +  D M  ++  PN  TY  L    G  ++ E    +      +N  P
Sbjct: 809 SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP 868

Query: 412 QEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  ++ S  + G  ++   L  +M   G   D+  Y  +    C EG   EAL++ 
Sbjct: 869 NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL 928

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF-QMMIEKGQMPNETTYTILV 524
                   K + D F+AL+  LCK ++    LE+  +M  E+  + ++T  T+L+
Sbjct: 929 NKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 983



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 193/403 (47%), Gaps = 10/403 (2%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+    +  N+L+R L     +    +    +++  +VP+ +TY+ +++A  K   V   
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             +L ++  K  KPNL +YN  + GLC+ G  +EA+   + +  KG  P+  +Y +L+  
Sbjct: 262 KMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C + R +EA  +   M     +P   TY  LI      G  + AL++ DEM+    + +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFA 398
             +YN +I  +   G++   +   ++M     +P+  TYN    G      + K  E  A
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLA 440

Query: 399 IIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +++    +  +P  F Y  +I+ LC      +A ++L +M + G  P+ + Y +LI+  
Sbjct: 441 EMKA----RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
             E   E A+E+  +M      PD+  +N L++GLC++++ + +  +   M EKG  PN 
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            TY   +   +   E++++    K++    +V  + +  ++++
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIK 599



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 36/301 (11%)

Query: 96   PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
            PDVV  + ++   CK+  + +A K+ + M+S GI PD   Y  L++   K+GN+  A+ L
Sbjct: 729  PDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSL 788

Query: 156  VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA--- 212
              + +     + +  +NSL+   C  G + ++ +  D ++ K L PN  TY+ L++A   
Sbjct: 789  FHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 847

Query: 213  -------------------------------AYKERGVHAAM-KLLDDIIAKGGKPNLVS 240
                                           +Y + G    M  L  D+ A+G   + ++
Sbjct: 848  AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 907

Query: 241  YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
            Y V+ +  CKEG++ EA++       +G +     ++ L+  LC E +     ELL+EM 
Sbjct: 908  YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 967

Query: 301  GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
              + S +  T N L+      G  D A KVL  M +  + P++ S    I+    + K D
Sbjct: 968  KEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMKSD 1027

Query: 361  L 361
            +
Sbjct: 1028 I 1028



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 95/205 (46%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D+  +  K+ +A    + MV K   P++V  T L+    KA  M++A ++   M +  II
Sbjct: 808  DSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNII 867

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  +YT L+    + GN    + L + ME  G   + + Y  +    C  G   ++L+ 
Sbjct: 868  PNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKL 927

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            L++ + +G+      +  L+    KE+ +   ++LL ++  +    +  + N LL G  K
Sbjct: 928  LNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYK 987

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVS 275
             G  +EA +    +   G+ P  +S
Sbjct: 988  SGNEDEASKVLGVMQRLGWVPTSLS 1012


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 226/466 (48%), Gaps = 1/466 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     R++     P +V    LL  + K       + +   M S G+ P+  +   
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    VG+A  ++ K+   G+  +  T+ +L+RGLC+ G + ++L   D++I +G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K     AA++LL  +     +P++V Y  ++  LCK+ +  EA 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  +  +G  P++ +Y  L+ +LC    W+    LL +M      P +V ++ ++ +L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A +++D M++    P   +Y  ++   C + ++D  VK  D M  +   P+ 
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +Y  L    C + K+ +A  + + +  K+     + Y  ++  LC  G+   A  L +E
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TYS L+  LC    +EEA+ +   +E  +  PD+  +N ++ G+C++  
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + + ++F  +  KG  P+  TY I++ G+  +  L  + ++  E+
Sbjct: 457 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 232/474 (48%), Gaps = 1/474 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M S G  P+V     L+   C  N++  A  V+  ++  G  PD +++T L+  LC +G
Sbjct: 81  QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEG 140

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +G A+ L +KM D G+  N VTY +L+ GLC +GN + +++ L  + Q    P+   Y+
Sbjct: 141 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT 200

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            ++++  K+R V  A  L   ++ +G  P++ +Y  L+  LC     +        + + 
Sbjct: 201 SIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 260

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              P+VV ++ ++ +LC EG+  EA+E++  M      P +VTY  L+       + D A
Sbjct: 261 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 320

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
           +KV D MV+  F P   SY  +I   C   K+D  +   ++M  +   P+  TYN L   
Sbjct: 321 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC VG++Q+A A+   +  +        Y  ++ SLC+     +A  LL  +      PD
Sbjct: 381 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPD 440

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
              Y+ +I G+C  G +E A ++F  +      P V  +N ++ GLCK    + + ++F 
Sbjct: 441 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 500

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            M      P+  TY  +  G    +E   + ++L+E+  R   ++ +   L+++
Sbjct: 501 EMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVE 554



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 234/457 (51%), Gaps = 2/457 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L +++  GH+PD    T L+  LC   K+ +A+ + + M+  G  P+  +Y  L+N
Sbjct: 110 AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 169

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK GN   A++L+  ME      + V Y S++  LC    + ++     +++ +G+ P
Sbjct: 170 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 229

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           + FTY+ L+ A            LL+ ++     P++V ++ ++  LCKEG+  EA    
Sbjct: 230 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 289

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G EP+VV+Y  L+   C++   +EA ++   M     +P +++Y  LI      
Sbjct: 290 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 349

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            K D A+ + +EM +  + P   +YN ++  LC  G++   +    +M  R   P+  TY
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           + L   LC    ++EA A+++++     +   + Y  +I  +CR G+   A  L   ++ 
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P  +TY+ +I GLC  GL+ EA ++F+ M+  D  PD   +N +  G  ++  T  
Sbjct: 470 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 529

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           ++++ + M+ +G   + +T T+LVE ++  D L+ S+
Sbjct: 530 AIQLLEEMLARGFSADVSTTTLLVEMLS-DDGLDQSS 565



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 203/433 (46%), Gaps = 34/433 (7%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  A+     ++     P    +  L+  + K  +    + L  +M+ +G P N  T 
Sbjct: 35  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 94

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+   C L  +  +   L ++++ G  P+  T++ L+     E  +  A+ L D +I 
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G +PN+V+Y  L+ GLCK G T  AIR  R +     +P+VV Y  ++ SLC + +  E
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE 214

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  L ++M G   SP I TY  L+ +L    +  H   +L++MV  +  P    ++ ++ 
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 274

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
            LC EGKV    + +D M  R  +P+  TY  L                           
Sbjct: 275 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL--------------------------- 307

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
                  +   C + +  +A ++   M + GF PD  +Y++LI G C    I++A+ +F 
Sbjct: 308 -------MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFE 360

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M   ++ PD   +N L+ GLC   R   ++ +F  M+ +GQMP+  TY+IL++ +    
Sbjct: 361 EMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNC 420

Query: 532 ELELSAEVLKELQ 544
            LE +  +LK ++
Sbjct: 421 HLEEAMALLKAIE 433



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 207/410 (50%), Gaps = 35/410 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF    +MV +G  PD+   T+L++ LC   + K    ++  MV+S I+
Sbjct: 204 DSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKIL 263

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   ++ +V+ LCK+G V  A ++V+ M   G   + VTY +L+ G C+   ++++++ 
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +++KG  P+  +Y+ L+    K   +  AM L +++  K   P+  +YN L+ GLC 
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCH 383

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++AI  F ++ ++G  P++V+Y+ILL SLC     EEA  LL  ++  + +P I  
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI+I  +   G+ + A  +   +      PS  +YN +I  LC  G ++   K   +M 
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C P+  TYN +A                  G  QN+                 +T +
Sbjct: 504 GNDCSPDGCTYNTIAR-----------------GFLQNN-----------------ETLR 529

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV-VMEEYDYK 479
           A QLL EM   GF+ D  T + L+  L  +GL + +  + + V+ E D +
Sbjct: 530 AIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSEDDRR 579


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 241/462 (52%), Gaps = 6/462 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           ++  G  P++V    L+   CKA +  +A++ +  +    + PD   +  L++ L K GN
Sbjct: 53  LLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGN 112

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG--LVPNAFTY 206
              A++L E ME        VTYN+++ GLC  GNL ++ + L+ +I+KG    P+  TY
Sbjct: 113 PDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTY 172

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L+ A Y+   +  A    + + A G  P++++ N+L++G+CK+G  EEA+     +  
Sbjct: 173 NTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKL 232

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P+V++YN ++ +LC+ G+  EA E+L  M     SP +VT+N L+      G    
Sbjct: 233 AGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPR 289

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           AL+VL+EM +    P   +Y  ++  LC  G+V +    L+++  +   P+   Y  L  
Sbjct: 290 ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD 349

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G+++EA  +++ +  +   +    Y  +++  CR G  ++A ++L EM      P
Sbjct: 350 GLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVP 409

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
             +TY+ ++ GL  +G I +A+ +   +    Y PDV  +N L+ GLCK+ R   + ++ 
Sbjct: 410 PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLA 469

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
             M  +G  PN+ T   +V G+     ++ +  ++ E+  ++
Sbjct: 470 DEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKR 511



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 215/409 (52%), Gaps = 4/409 (0%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           +R  ++ +A    E+M + G  PDV+    L+  +CK   +++A+++++ M  +G +PD 
Sbjct: 180 YRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  +++ LC  G V  A ++++ M       + VT+N+L+ G C  G L ++L+ L+ 
Sbjct: 240 ITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEE 296

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + ++ ++P+  TY+ L+    +   V  A  LL++I+ +G  P++++Y  L+ GLCK G 
Sbjct: 297 MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE 356

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA +  +++  +G    VV Y+ L+   C  G   +A E+LAEM   +  P + TYNI
Sbjct: 357 IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           ++G L   G    A+ ++ ++V   + P   +YN +I  LC   +V       D+M  R 
Sbjct: 417 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN+ T   +   LC VG+V +A++++  +  K+++     Y  +I  LC+  +   A 
Sbjct: 477 CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDAC 536

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            +L  M   G   D + Y  LI  +   G + EA+ ++  M    + PD
Sbjct: 537 MVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 212/424 (50%), Gaps = 8/424 (1%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  SY +L++ L K G+     ++ + +   G   N VT+  L+RG C  G   ++L+FL
Sbjct: 26  DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             L +  + P+ + ++ L+   +K+     A+KL +++ +   KP +V+YN +++GLCK 
Sbjct: 86  RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145

Query: 252 GRTEEAIRFFRDLPSKGFE--PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           G  E+A     ++  KG +  P++V+YN L+ +     R  EA     +M     +P ++
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T NIL+  +   G  + AL++LD M      P   +YN II  LC  GKV    + L  M
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGK 427
               C P+  T+N L    C  G +  A  +++ +  ++N  P    Y  ++  LCR G+
Sbjct: 266 ---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM-CRENILPDVITYTILVNGLCRVGQ 321

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              AF LL E+ + G+ PD   Y+SL+ GLC  G IEEA ++   M     +  V  +++
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSS 381

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+ G C++     + E+   M+    +P   TY I++ G+     +  +  ++ +L  R 
Sbjct: 382 LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 441

Query: 548 VVSE 551
            V +
Sbjct: 442 YVPD 445



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 157/299 (52%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M  +   PDV+  T L+  LC+  +++ A  ++E +V  G IPD  +YT LV+ LCK
Sbjct: 294 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 353

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +LV++M   G  T  V Y+SLV G C  GN++++ + L  ++   +VP  FT
Sbjct: 354 SGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFT 413

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +L    K+  +  A+ L+ D++A+G  P++V+YN L+ GLCK  R  EA     ++ 
Sbjct: 414 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 473

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S+G  PN V+   ++  LC  GR ++A  L+ EM     +P +V Y  LI  L    + D
Sbjct: 474 SRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 533

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
            A  VLD M          +Y  +I  +   G+V   +   D+M  R   P+  T   L
Sbjct: 534 DACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 190/388 (48%), Gaps = 8/388 (2%)

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
           E  GY  +  +YN L+  L   G+  ++ +    L+  G  PN  T+  L+    K    
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A++ L  +      P++  +NVL+ GL K+G  ++A++ F ++ S   +P +V+YN +
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 280 LRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
           +  LC  G  E+A ELL EM   GG  +P IVTYN LI +     +   A    ++M   
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA 396
              P   + N +++ +C +G V+  ++ LD M      P+  TYN +   LC  GKV EA
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258

Query: 397 FAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
             I++++    + SP    +  ++   C+ G   +A ++L EM +    PD  TY+ L+ 
Sbjct: 259 AEILKTM----SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVN 314

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GLC  G ++ A  +   +    Y PDV  + +L+ GLCKS   + + ++ + M  +G   
Sbjct: 315 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRT 374

Query: 516 NETTYTILVEGIAHQDELELSAEVLKEL 543
               Y+ LV G      +  + E+L E+
Sbjct: 375 GVVMYSSLVSGYCRAGNVHKAREILAEM 402



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 183/364 (50%), Gaps = 7/364 (1%)

Query: 187 SLQFLDRL-IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           ++QF D    Q G   +  +Y+ LL+   K        K+  D++  G  PNLV++ +L+
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G CK G+   A+ F R L      P+V  +N+L+  L  +G  ++A +L   M+     
Sbjct: 70  RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVK 129

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVK--GRFRPSAASYNPIIARLCSEGKVDLVV 363
           P IVTYN +I  L   G  + A ++L+EM++  G+  P   +YN +I       ++    
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC 189

Query: 364 KCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
              ++M      P+  T N L + +C  G V+EA  I+  +           Y  +I +L
Sbjct: 190 AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL 249

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C  GK  +A ++L  M+    +PD  T+++L+ G C  G++  ALE+   M   +  PDV
Sbjct: 250 CVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV 306

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +  L+ GLC+  +  ++  + + ++ +G +P+   YT LV+G+    E+E + +++KE
Sbjct: 307 ITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKE 366

Query: 543 LQLR 546
           + +R
Sbjct: 367 MSVR 370



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 35/174 (20%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP--- 131
           +D  ++ A   +  +V++G+ PDVV    L+  LCKAN++++A  + + M S G  P   
Sbjct: 423 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDV 482

Query: 132 ----------------DASS----------------YTYLVNCLCKKGNVGYAMQLVEKM 159
                           DA S                YT L++ LCK   +  A  +++ M
Sbjct: 483 TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAM 542

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
              G   +   Y  L+  +   G + +++   D ++ +G +P+  T   L EAA
Sbjct: 543 RGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAA 596


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 233/460 (50%), Gaps = 35/460 (7%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  K    +V   ++++  L K  K +++ KV+E M+++G  PD  ++  ++    +  N
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A ++ + M + GY  + V+Y+ L+ GL  +G L++SL+ L  ++ +G  P+   YS 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+ A  K R V  A  L D++I  G  P+ + +  L+ GLC+ G+ ++A   F+ +P  G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +PNV  YN+LL  LC  G+ E+AN L AEM     SP +VTYN L+ ++    + +   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
           K+ + M    + P+  +++ +I  LC  G+++  ++    M    CKPN+ TY  L    
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL---- 296

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                                         I+ LCR  K  QA +L  +MT+    PD+ 
Sbjct: 297 ------------------------------ISGLCRAEKVIQARELFEKMTQACIPPDAV 326

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            Y+SLI G C  G ++EA +++  M      +P +  FN L+ G CK  +   + E+   
Sbjct: 327 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 386

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           M  KG   +  TY IL+ G++   +L+ + EV K+++ ++
Sbjct: 387 MGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKK 426



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 237/479 (49%), Gaps = 2/479 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K  +++  LE M++ G  PDV     ++    ++N M+KA +V + MV SG  PD  
Sbjct: 22  KEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNV 81

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++ L K G +  +++++ +M   G   +   Y+SLVR L     ++ +    D +
Sbjct: 82  SYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEM 141

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ G  P+   +  L+    +   V  A +    +   G +PN+  YNVLL GLC  G+ 
Sbjct: 142 IRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQL 201

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A   F ++ S    P+VV+YN LL ++C   R EE  +L   M      P ++T++ L
Sbjct: 202 EQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTL 261

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+ + AL+V   M++   +P+  +Y  +I+ LC   KV    +  ++M     
Sbjct: 262 IHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACI 321

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            P+   YN L A  C  G + EA  + + +       P    +  +I   C+ GK  +A 
Sbjct: 322 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 381

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L+ EM   G   DS TY  LI GL     ++EALE++  M E  +  D  +  + + GL
Sbjct: 382 ELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 441

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           CK+   D +  VF+   + G +PN  T+ IL E +     +E + ++++  + R + ++
Sbjct: 442 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 500


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 229/472 (48%), Gaps = 9/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ AF   +RMV  G  P+ V  + L+  LC   ++++A+ ++E M+  GI P   
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  +  LC  G    A++L+ KM+  G   N  TY +L+ GL   G    ++    ++
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GLVP A TYS L+   Y E     A+ + + +++    PN  +YNV++ G C  G  
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A   F  +   G  PNV++YNI++     +G    A  LL  M G        TY  L
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANL 488

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  GK +HA  + +EMV+    P+  +YN II    +  KVD  +    +M     
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN--KQNSSPQEF-YKYVITSLCRKGKTYQA 431
            P+ GTYN   M+ G  K           G   KQ   P    Y   I  LC+ G+T  A
Sbjct: 549 VPSSGTYN--MMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLA 606

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F++ +EM K  + P+  TYSSLI GLC EG  E+A  +     +   +P+VD +  L+ G
Sbjct: 607 FKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRG 662

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           LC   R   + ++ + M +KG  P+E  Y  L+ G     E+E + ++   +
Sbjct: 663 LCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 237/462 (51%), Gaps = 5/462 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M  +G  P+V   T L+  L +  K + AI V   M++ G++P A +Y+ L+N L  
Sbjct: 330 LGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYV 389

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G    A+ + E M  +    NT TYN +++G C +G + ++    D++++ G  PN  T
Sbjct: 390 EGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVIT 449

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++   +K+  ++ AM+LL+ +   G K +  +Y  L++G  + G+ E A   F ++ 
Sbjct: 450 YNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMV 509

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PNVV+YN ++       + ++A  L  +M      P+  TYN++I   +   +  
Sbjct: 510 EHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRIS 569

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A     +MVK    P+  +Y   I  LC  G+  L  K   +M  R   PN  TY+ L 
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLI 629

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  G+ ++A  ++   G + N    + Y  ++  LC KG+ Y+A QL+  M K G  
Sbjct: 630 DGLCQEGQAEDAERLLDD-GCEPNV---DTYTTLVRGLCGKGRCYEADQLVESMKKKGLQ 685

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P    Y +L+ G C    +E AL+IF  M    ++P + ++ AL+  LCK+     +  +
Sbjct: 686 PSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCM 745

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           FQ M++K    +E  +T+L++G+  + E +LS E+L  ++ R
Sbjct: 746 FQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 213/424 (50%), Gaps = 1/424 (0%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M++SGI P+  ++  ++  LC KG V  A  ++  +  YG   +T TY SL+ G C  GN
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ + +  DR+++ G  PN+ TYS L+     E  +  AM +L+++I KG +P + +Y +
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
            +  LC  GR+ EA++    +  +G  PNV +Y  L+  L  +G++E A  +  +M    
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             PT VTY+ LI  L   G+ + AL + + M+     P+  +YN II   CS G +    
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT 432

Query: 364 KCLDQMFHRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
              DQM      PN  TYN +  +    G +  A  +++ +           Y  +I+  
Sbjct: 433 AIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGF 492

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
            R GK   AF L  EM ++G +P+  TY+++I G      +++AL +F  M E    P  
Sbjct: 493 SRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSS 552

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N ++ G  K+ R   +      M+++G +PN  TYT  ++G+       L+ ++  E
Sbjct: 553 GTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHE 612

Query: 543 LQLR 546
           ++ R
Sbjct: 613 MKKR 616



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 226/455 (49%), Gaps = 1/455 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M++ G +P++     ++  LC   K+++A  +M  +   G  PD  +YT L+   CK GN
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A ++ ++M   G   N+VTY++L+ GLC  G L +++  L+ +I KG+ P    Y+ 
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            + +         A+KLL  +  +G  PN+ +Y  L++GL ++G+ E AI  +  + + G
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P  V+Y+ L+  L +EGR+E A  +   M   D  P   TYN++I      G    A 
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT 432

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY-NGLAML 387
            + D+M+K    P+  +YN II     +G ++  ++ L+ M     K +  TY N ++  
Sbjct: 433 AIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGF 492

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
              GK++ AF++   +     S     Y  +I       K   A  L ++M + G  P S
Sbjct: 493 SRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSS 552

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ +I G      I EA      M +    P+V  + + + GLCK+ RT L+ ++F  
Sbjct: 553 GTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHE 612

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           M ++   PN  TY+ L++G+  + + E +  +L +
Sbjct: 613 MKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD 647



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 201/400 (50%), Gaps = 1/400 (0%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S++ L+  L K    G    +  +M + G   N  T+N++++ LC  G + ++   +  +
Sbjct: 169 SFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHI 228

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G  P+ FTY+ L+    K   +  A ++ D ++  G  PN V+Y+ L+ GLC EGR 
Sbjct: 229 FHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRL 288

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+    ++  KG EP V +Y I + SLC  GR  EA +LL +M      P + TY  L
Sbjct: 289 EEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTAL 348

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L+  GK + A+ V  +M+     P+A +Y+ +I +L  EG+ +  +   + M     
Sbjct: 349 ISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDS 408

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN +    C +G +Q+A AI   +     S     Y  +I    ++G    A +
Sbjct: 409 LPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMR 468

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M   G   D++TY++LI G    G +E A  +F  M E+   P+V  +NA++ G  
Sbjct: 469 LLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYL 528

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
              + D +L +F  M+E G +P+  TY +++ G +  + +
Sbjct: 529 TVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRI 568



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 137/303 (45%), Gaps = 37/303 (12%)

Query: 278 ILLRSLCMEGRWEEANELLAEMDGG-DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           ++++S   EG  +   ++L+E++   D   T+ +++ L+  L           V  EM+ 
Sbjct: 136 LMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLN 195

Query: 337 GRFRPSAASYNPIIARLCSEGKV-----------------------------------DL 361
              RP+  ++N +I  LC++GKV                                   DL
Sbjct: 196 SGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDL 255

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
             +  D+M    C PN  TY+ L   LC  G+++EA  +++ + +K        Y   I 
Sbjct: 256 AFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIV 315

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           SLC  G++ +A +LL +M K G  P+  TY++LI GL  +G  E A+ ++  M      P
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
               ++AL+  L    R + +L +F+ M+    +PN  TY ++++G      ++ +  + 
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435

Query: 541 KEL 543
            ++
Sbjct: 436 DQM 438



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 39/235 (16%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +MV +G  P+V+  T+ +  LCK  +   A K+   M      P+  +Y+ L++ LC++G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEG 636

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
               A    E++ D G   N  TY +LVRGLC  G   ++ Q ++ + +KGL P+   Y 
Sbjct: 637 QAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYR 692

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNL----------------------------- 238
            LL    K   V +A+K+ D ++  G +P L                             
Sbjct: 693 ALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKK 752

Query: 239 ------VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
                 V + VLL GL KEG T+ ++     + S+    N  +  +L R L   G
Sbjct: 753 HWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALG 807



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 43/173 (24%)

Query: 411 PQEFYKYVITSLCR-KGKTYQAFQLLYEM-TKYGFTPDSYTYSSLIRGLC---MEGLIEE 465
           P +  + ++   CR +G+  +  Q+L E+ T Y F    Y++S+L+  L    M+GL   
Sbjct: 129 PADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGL--- 185

Query: 466 ALEIFVVMEEYDYKPDVDNFNA-----------------------------------LLL 490
             ++++ M     +P++  FNA                                   L++
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           G CK+   DL+ E+F  M++ G  PN  TY+ L+ G+  +  LE + ++L+E+
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEM 298



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 51/108 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++  A    + MV+ G +P +     L+  LCKAN  +KA  + + M+      D  
Sbjct: 700 KNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEV 759

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
            +T L++ L K+G    +++L+  ME      N  T   L R L  LG
Sbjct: 760 VWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALG 807


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 255/559 (45%), Gaps = 71/559 (12%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL++A      MV     P +V+ + LL  + K  K    I   E M   G+  +  +Y 
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++NCLC++  + +A+ ++ KM   GY  + VT NSL+ G C    +++++  +D++++ 
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG----- 252
           G  P+  T++ L+   ++      A+ L++ ++ KG +P+LV+Y  ++ GLCK G     
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 253 ------------------------------RTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                                           ++A+  F ++ +KG  P+V +Y+ L+  
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  GRW +A+ LL++M     +P +VT+N LI + A  GK   A K+ DEM++    P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             +YN +I   C   ++D   +    M  + C P+  TYN L    C   KV +   + +
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 402 SLGNK--------------------QNSSPQEFYKYVIT---------------SLCRKG 426
            +  +                       + Q  +K +++                LC+ G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           K  +A  +   + K    PD YTY+ +  G+C  G +E+  ++F  +     KPDV  +N
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ G CK    + +  +F  M E G +P+  TY  L+       +   SAE++KE++  
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584

Query: 547 QVVSESAVERLVMQYDFEG 565
           +   +++   LV     +G
Sbjct: 585 RFAGDASTYGLVTDMLHDG 603



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 227/461 (49%), Gaps = 6/461 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++++A   +++MV  G++PD V  T L++ L + NK  +A+ ++E MV  G  PD  +Y
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++N LCK+G    A+ L+ KME      + V Y++++  LC   +++ +L     +  
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ P+ FTYS L+           A +LL D++ +   PN+V++N L+    KEG+  E
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A + F ++  +  +PN+V+YN L+   CM  R +EA ++   M   D  P +VTYN LI 
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 K    +++  +M +     +  +Y  +I         D       QM      P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS--LCRKGKTYQAFQ 433
           N  TYN L   LC  GK+++A  + + L  K    P + Y Y I S  +C+ GK    + 
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYL-QKSKMEP-DIYTYNIMSEGMCKAGKVEDGWD 506

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   ++  G  PD   Y+++I G C +GL EEA  +F+ M+E    PD   +N L+    
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +      S E+ + M       + +TY  LV  + H   L+
Sbjct: 567 RDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLD 606



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 146/290 (50%), Gaps = 1/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + M+ +   P++V   +L+   C  +++ +A ++  +MVS   +
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N  CK   V   M+L   M   G   NTVTY +L+ G     + + +   
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             +++  G+ PN  TY+ LL+   K   +  AM + + +     +P++ +YN++  G+CK
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+    F  L  KG +P+V++YN ++   C +G  EEA  L  +M      P   T
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YN LI +    G    + +++ EM   RF   A++Y  ++  +  +G++D
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLD 606



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 149/320 (46%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   L  M+ +   P+VV   +L+    K  K+ +A K+ + M+   I P+  +Y 
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  C    +  A Q+   M       + VTYN+L+ G C    +   ++    + ++
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLV N  TY+ L+   ++      A  +   +++ G  PN+++YN LL GLCK G+ E+A
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  L     EP++ +YNI+   +C  G+ E+  +L   +      P ++ YN +I  
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  + A  +  +M +    P + +YN +I     +G      + + +M   R   +
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589

Query: 378 EGTYNGLAMLCGVGKVQEAF 397
             TY  +  +   G++ + F
Sbjct: 590 ASTYGLVTDMLHDGRLDKGF 609



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 36/306 (11%)

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIV----------------------------- 309
           L R+  +  + +EA +L  EM      P+IV                             
Sbjct: 36  LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95

Query: 310 ------TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
                 TYNI+I  L    +   AL +L +M+K  + PS  + N ++   C   ++   V
Sbjct: 96  VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
             +DQM     +P+  T+  L   L    K  EA A+++ +  K        Y  VI  L
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++G+   A  LL +M K     D   YS++I  LC    +++AL +F  M+    +PDV
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +++L+  LC   R   +  +   M+E+   PN  T+  L++  A + +L  + ++  E
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335

Query: 543 LQLRQV 548
           +  R +
Sbjct: 336 MIQRSI 341


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 232/474 (48%), Gaps = 36/474 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  +  ++ DA   +  M  +G  P +     LL DL +A+ M    KV E MV +GI 
Sbjct: 182 DTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGIS 241

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L+   CK      A +++ +M + G   NTVTYN L+ GLC  G + ++  F
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   GLVP+ FTY  L+    K R  + A  LLD++     KPN+V Y  L+ G  +
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG  +EA +  +++ + G +PN ++Y+ L+R LC  G+ + A+ LL +M      P  +T
Sbjct: 362 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421

Query: 311 YNILI-GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           YN++I G   +H K D A ++L EM      P+  +Y+ +I  LC  G+ +     L++M
Sbjct: 422 YNLIIEGHFRHHSKKD-AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 480

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
             +  KPN                  AF                 Y  +I+  CR+G   
Sbjct: 481 TTKGLKPN------------------AFV----------------YAPLISGYCREGNVS 506

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A ++  +MTK    PD Y Y+SLI GL   G +EE+ + F  M+E    P+   ++ L+
Sbjct: 507 LACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLI 566

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G  K+   + + ++ Q M++ G  PN+  Y  L+E     D++E  +   K +
Sbjct: 567 HGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 208/410 (50%), Gaps = 9/410 (2%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV+   K G V  A ++V  M D G   +    N+L++ L     +    +  + ++  G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+ +TYS L+EA  K R    A K+L ++  +G   N V+YNVL+ GLC+ G  EEA 
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F +D+   G  P+  +Y  L+  LC   R  EA  LL EM   +  P +V Y  LI   
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  D A K++ EMV    +P+  +Y+ ++  LC  G++D     L QM     +P+ 
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419

Query: 379 GTYNGLAMLCGVGKV-----QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            TYN    L   G       ++AF ++  + N   S     Y  +I  LC+ G+  +A  
Sbjct: 420 ITYN----LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EMT  G  P+++ Y+ LI G C EG +  A EIF  M + +  PD+  +N+L+ GL 
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 535

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K  R + S + F  M E+G +PNE TY+ L+ G     +LE + ++++ +
Sbjct: 536 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 222/484 (45%), Gaps = 39/484 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H   DAF  L  M + G  P+V   + +++ LC++ + +KA  ++E M + G+ P+A 
Sbjct: 431 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 490

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++  C++GNV  A ++ +KM       +   YNSL+ GL  +G + +S ++  ++
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 550

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++GL+PN FTYS L+    K   + +A +L+  ++  G KPN V Y  LL    K    
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+    F+ +  +G   +   Y IL+ +L   G  E A  +L+ ++     P +  Y+ L
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 670

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L      + A  +LDEM K    P+   YN +I  LC  G +       + +  +  
Sbjct: 671 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 730

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            PN  TY  L                                  I   C+ G    AF L
Sbjct: 731 VPNCVTYTSL----------------------------------IDGSCKVGDISNAFYL 756

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY-DYKPDVDNFNALLLGLC 493
             EM   G TPD++ YS L  G    G +E+A+  F++ E +      + +FN L+ G C
Sbjct: 757 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM--FLIEEMFLRGHASISSFNNLVDGFC 814

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K  +   +L++  +++ +G +PN  T   ++ G++   +L     +  ELQ  Q  SESA
Sbjct: 815 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ--QKTSESA 872

Query: 554 VERL 557
               
Sbjct: 873 ARHF 876



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 175/362 (48%), Gaps = 17/362 (4%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+++L  +  M+ A +V+  +  +G +PD   Y+ L++ LCK  +   A  ++++M   G
Sbjct: 635 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 694

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N V YN+L+ GLC  G+++ +    + ++ KGLVPN  TY+ L++ + K   +  A 
Sbjct: 695 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 754

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L ++++A G  P+   Y+VL TG    G  E+A+    ++  +G   ++ S+N L+   
Sbjct: 755 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGF 813

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G+ +E  +LL  + G    P  +T   +I  L+  GK      +  E+ +     +A
Sbjct: 814 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 873

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
             ++ +   + ++GK+ L V  +D M    CK  EG  +   ML  V   + A     S 
Sbjct: 874 RHFSSLFMDMINQGKIPLDV--VDDMIRDHCK--EGNLDKALMLRDVIVAKSAPMGCSS- 928

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                      Y  ++ +LCRKGK  +A  LL EM K G  P       L+  L   G I
Sbjct: 929 -----------YLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYI 977

Query: 464 EE 465
           +E
Sbjct: 978 QE 979



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/496 (22%), Positives = 202/496 (40%), Gaps = 55/496 (11%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M +KG KP+      L+   C+   +  A ++ + M    ++PD   Y  L+  L K
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 536

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  + +   +M++ G   N  TY+ L+ G    G+L  + Q + R++  GL PN   
Sbjct: 537 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 596

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  LLE+ +K   +         ++ +G   +   Y +L+  L   G  E A R    + 
Sbjct: 597 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+V  Y+ L+  LC     E+A  +L EM      P IV YN LI  L   G   
Sbjct: 657 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 716

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           +A  V + ++     P+  +Y  +I   C  G +       ++M      P+   Y+ L 
Sbjct: 717 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 776

Query: 386 MLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             C   G +++A  +I+ +  + ++S   F   ++   C++GK  +  +LL+ +   G  
Sbjct: 777 TGCSSAGDLEQAMFLIEEMFLRGHASISSFNN-LVDGFCKRGKMQETLKLLHVIMGRGLV 835

Query: 445 PDSYTYSSLIRGL----------------------------------------------- 457
           P++ T  ++I GL                                               
Sbjct: 836 PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVD 895

Query: 458 ------CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
                 C EG +++AL +  V+          ++ A++  LC+  +   +L + + M ++
Sbjct: 896 DMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 955

Query: 512 GQMPNETTYTILVEGI 527
           G  P+E    IL+  +
Sbjct: 956 GICPSENQCLILLTNL 971



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 21/270 (7%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +++KG  P+ V  T+L+   CK   +  A  +   M+++GI PDA  Y+ L       G+
Sbjct: 725 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 784

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  AM L+E+M   G+ + + ++N+LV G C  G + ++L+ L  ++ +GLVPNA T   
Sbjct: 785 LEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 843

Query: 209 L---LEAAYKERGVHAAM----------------KLLDDIIAKGGKPNLVSYNVLLTGLC 249
           +   L  A K   VH                    L  D+I +G  P L   + ++   C
Sbjct: 844 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHC 902

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           KEG  ++A+     + +K       SY  ++ +LC +G+  EA  LL EMD     P+  
Sbjct: 903 KEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSEN 962

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
              IL+ +L   G       VLD M+  ++
Sbjct: 963 QCLILLTNLHTSGYIQEHNTVLDNMLCHKW 992


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 232/478 (48%), Gaps = 6/478 (1%)

Query: 73  RHRD----HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA-IKVMEMMVSS 127
           +H D      ++DA      M+ +   P ++Q T LL  + K  +   A I + + M  +
Sbjct: 65  KHDDASSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELA 124

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G+ PD  + + L++C      V  A  +  KM   G   + VT+N+L+ GLC +G   Q+
Sbjct: 125 GLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           ++F D     G  P  +TY+ ++    K     AA  L   +   G +PN+V+YN+L+  
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDS 244

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           LCK+    EA+  F  + +K   P++ +YN L++ LC   RW+EA+ LL EM   +  P 
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           I T+N+L+ ++   GK   A  V   M +    P   +Y+ ++       ++    K  D
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFD 364

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            M  + CKP+  +YN L    C   ++ EA  +   + ++  +     Y  +I  LC+ G
Sbjct: 365 AMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG 424

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  L   M   G  PD +TYS L+ G C EG + +A  +F VM+    KPD+  +N
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYN 484

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            L+  +CK      + ++F  +  +G +PN   YT ++  +  +  L+ + E  + ++
Sbjct: 485 ILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNME 542



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 232/469 (49%), Gaps = 1/469 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M   G  PD+   + L+       ++  A  V   M+  G+ PDA ++  L+N LCK 
Sbjct: 119 KQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKV 178

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G    A++  +  E  G      TY +++ GLC +G    +     ++ + G  PN  TY
Sbjct: 179 GKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTY 238

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L+++  K++ V+ A+ +   + AK   P++ +YN L+ GLC   R +EA     ++ S
Sbjct: 239 NILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               PN+ ++N+L+ ++C EG+  EA  +   M      P +VTY+ L+   +   +   
Sbjct: 299 LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE 358

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A K+ D M+    +P A SYN +I   C   ++D   +  ++M H+   P+   YN L  
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC +G+++EA  + +++ +  N      Y  ++   C++G   +AF+L   M      P
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP 478

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D   Y+ LI  +C  G +++A ++F  +      P+V  +  ++  LCK    D +LE F
Sbjct: 479 DIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAF 538

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           + M   G  P+E +Y +++ G     +   +A+++ E++ R  V+E+  
Sbjct: 539 RNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 216/446 (48%), Gaps = 1/446 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +++ AF    +M+  G +PD V    L+  LCK  K  +A++  +   +SG  P   +Y
Sbjct: 144 QRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTY 203

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T ++N LCK G    A  L +KME+ G   N VTYN L+  LC    +N++L     +  
Sbjct: 204 TTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKA 263

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           K + P+ FTY+ L++     R    A  LL+++ +    PN+ ++NVL+  +CKEG+  E
Sbjct: 264 KRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSE 323

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F+ +   G EP+VV+Y+ L+    +     EA +L   M      P   +YNILI 
Sbjct: 324 AQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIK 383

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A ++ +EM+     P   +YN +I  LC  G++         M      P
Sbjct: 384 GYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP 443

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY+ L    C  G + +AF + + + +         Y  +I ++C+ G    A +L 
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            E+   G  P+   Y+++I  LC EGL++EALE F  ME     PD  ++N ++ G  + 
Sbjct: 504 SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQY 563

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYT 521
           +    + ++   M ++G +    T T
Sbjct: 564 KDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 163/312 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  +N+A      M +K   PD+    +L+  LC   + K+A  ++  M S  I+
Sbjct: 243 DSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIM 302

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  LV+ +CK+G V  A  + + M + G   + VTY+SL+ G  +   + ++ + 
Sbjct: 303 PNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKL 362

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I KG  P+AF+Y+ L++   K + +  A +L +++I +G  P+ V+YN L+ GLC+
Sbjct: 363 FDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQ 422

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA   F+++ S G  P++ +Y++LL   C EG   +A  L   M      P I  
Sbjct: 423 LGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAM 482

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNILI ++   G    A K+  E+      P+   Y  II  LC EG +D  ++    M 
Sbjct: 483 YNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNME 542

Query: 371 HRRCKPNEGTYN 382
              C P+E +YN
Sbjct: 543 GDGCPPDEFSYN 554



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 140/275 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+++A    + M   G +PDVV  ++L+Y      ++ +A K+ + M++ G  
Sbjct: 313 DAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCK 372

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PDA SY  L+   CK   +  A QL  +M   G   + V YN+L+ GLC LG L ++   
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDL 432

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G +P+ FTYS LL+   KE  +  A +L   + +   KP++  YN+L+  +CK
Sbjct: 433 FKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCK 492

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A + F +L  +G  PNV  Y  ++ +LC EG  +EA E    M+G    P   +
Sbjct: 493 FGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFS 552

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           YN++I     +     A +++ EM    F   A +
Sbjct: 553 YNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 236/486 (48%), Gaps = 36/486 (7%)

Query: 94  HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           H P +++   +L  L K       I + + M + GI+PD  + + L+NC C  G + ++ 
Sbjct: 6   HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            ++ K+   GY  NT+  N+L++GLC+ G + +SL F D+++ +G   +  +Y  LL   
Sbjct: 66  SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGL 125

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K      A+KLL  I  +  +P++V Y+ ++ GLCK+   +EA   + ++ ++G  P+V
Sbjct: 126 CKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV 185

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           ++Y  L+   C+ G+  EA  LL EM   + +P I TYN LI +L   GK   +  +L  
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245

Query: 334 MVKGRFRPSAA-----------------------------------SYNPIIARLCSEGK 358
           M K   +P                                      SYN II  LC   +
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           VD  +  L +M H+   P+  TY+ L   LC +G++     + + + ++   +    Y  
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++  LC+     +A  L  +M + G  P+ YTY++LI GLC  G +++   +F  +    
Sbjct: 366 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           Y  DV  +  ++ GLCK    D +L +   M + G +PN  T+ I++  +  +DE + + 
Sbjct: 426 YCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAE 485

Query: 538 EVLKEL 543
           ++L E+
Sbjct: 486 KLLHEM 491



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 220/435 (50%), Gaps = 1/435 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +F  L +++  G++P+ +    L+  LC   ++KK++   + +V+ G   D  SY  L+N
Sbjct: 64  SFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLN 123

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G    A++L+  +ED     + V Y++++ GLC    ++++      +  +G+ P
Sbjct: 124 GLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFP 183

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ L+        +  A  LL+++I K   PN+ +YN L+  LCKEG+ +E+    
Sbjct: 184 DVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLL 243

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  KG +P+VV Y+IL+   C+ G  ++A ++   M     +P + +YNI+I  L   
Sbjct: 244 AVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKG 303

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D A+ +L EM+     P   +Y+ +I  LC  G++  ++    +M HR    N  TY
Sbjct: 304 KRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTY 363

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N L   LC    + +A A+   +  +     +  Y  +I  LC+ G+  +   L   +  
Sbjct: 364 NSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLV 423

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G+  D +TY+ +I GLC EG+ +EAL +   ME+    P+   F  ++  L +    D 
Sbjct: 424 KGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDK 483

Query: 501 SLEVFQMMIEKGQMP 515
           + ++   MI KG +P
Sbjct: 484 AEKLLHEMIAKGLLP 498



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 177/349 (50%), Gaps = 3/349 (0%)

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P    +  +L +  K +     + L   + AKG  P+LV+ ++L+   C  G+   +  
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               +   G++PN +  N L++ LC++G  +++     ++         V+Y IL+  L 
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G+T  A+K+L  +     RP    Y+ II  LC +  VD       +M  R   P+  
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           TY  L    C  G++ EAF ++  +  K N +P  + Y  +I +LC++GK  ++  LL  
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILK-NINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           MTK G  PD   YS L+ G C+ G +++A +IF+VM +    PDV ++N ++ GLCK +R
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            D ++ + + M+ K  +P+  TY+ L++G+     +    ++ KE+  R
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHR 354



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 170/353 (48%), Gaps = 1/353 (0%)

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+VP+  T S L+        +  +  +L  I+  G +PN +  N L+ GLC +G  ++
Sbjct: 39  KGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKK 98

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           ++ F   + ++GF+ + VSY ILL  LC  G    A +LL  ++     P +V Y+ +I 
Sbjct: 99  SLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIID 158

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L      D A  +  EM      P   +Y  +I   C  G++      L++M  +   P
Sbjct: 159 GLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINP 218

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TYN L   LC  GKV+E+  ++  +  K        Y  ++   C  G+  +A Q+ 
Sbjct: 219 NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIF 278

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M + G  PD Y+Y+ +I GLC    ++EA+ +   M   +  PD   +++L+ GLCK 
Sbjct: 279 LVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            R    L++ + M  +GQ  N  TY  L++G+     L+ +  +  +++ R +
Sbjct: 339 GRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGI 391



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 146/271 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++ K+ ++   L  M  KG KPDVV  + L+   C   +++KA ++  +MV +G+ 
Sbjct: 228 DTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVN 287

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SY  ++N LCK   V  AM L+ +M       +TVTY+SL+ GLC LG +   L  
Sbjct: 288 PDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDL 347

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  +G   N  TY+ LL+   K + +  A+ L   +  +G +PN  +Y  L+ GLCK
Sbjct: 348 TKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 407

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++    F+ L  KG+  +V +Y +++  LC EG ++EA  + ++M+     P  VT
Sbjct: 408 GGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVT 467

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           + I+I SL    + D A K+L EM+     P
Sbjct: 468 FEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 170/375 (45%), Gaps = 34/375 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +++A+     M ++G  PDV+  T L+   C A ++ +A  ++  M+   I 
Sbjct: 158 DGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNIN 217

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++ LCK+G V  +  L+  M   G   + V Y+ L+ G C++G + ++ Q 
Sbjct: 218 PNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQI 277

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++Q G+ P+ ++Y+ ++    K + V  AM LL +++ K   P+ V+Y+ L+ GLCK
Sbjct: 278 FLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCK 337

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR    +   +++  +G   N+V+YN LL  LC     ++A  L  +M      P   T
Sbjct: 338 LGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYT 397

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI  L   G+      +   ++   +     +Y  +I+ LC EG  D  +    +M 
Sbjct: 398 YTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKME 457

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C PN  T                                  ++ +I SL  K +  +
Sbjct: 458 DNGCIPNAVT----------------------------------FEIIIRSLLEKDENDK 483

Query: 431 AFQLLYEMTKYGFTP 445
           A +LL+EM   G  P
Sbjct: 484 AEKLLHEMIAKGLLP 498



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 34/289 (11%)

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P ++ +  +L SL     +     L  +M+     P +VT +ILI    + G+   +  V
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV 390
           L +++K  ++P+    N ++  LC +G+V    K L   FH +                 
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVK---KSLH--FHDKV---------------- 106

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
             V + F +            Q  Y  ++  LC+ G+T  A +LL  +      PD   Y
Sbjct: 107 --VAQGFQM-----------DQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMY 153

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S++I GLC + L++EA +++  M      PDV  +  L+ G C + +   +  +   MI 
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMIL 213

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           K   PN  TY  L++ +  + +++ S  +L  +  + V  +  +  ++M
Sbjct: 214 KNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILM 262


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 242/468 (51%), Gaps = 15/468 (3%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +L DA   LE + + G   D V    L+   C+   +  A +V+E   +SG   +  +Y
Sbjct: 130 RRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERVVEAARASGTA-NVVTY 187

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L++  C+ G +  A++L+  M       +T TYN++++GLC      Q+ + +  +I+
Sbjct: 188 TALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIR 244

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
               PN  T++  + A  +   +  A++LL+ +   G  P+++ Y+ L+ G  + GR +E
Sbjct: 245 NSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDE 304

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++    +  +   PN V YN  L+ LC+ GRWEE  EL+AEM   D  P   T++ LI 
Sbjct: 305 ALKLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLIN 361

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           SL  +   ++A++VL++M K  + P   SYN II+    + + D  +K L  M    CKP
Sbjct: 362 SLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKP 418

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  ++N  L  LC   +  +A  ++  +  K     +  +  +I SLC+ G+   A ++ 
Sbjct: 419 DTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVF 478

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M KY   PD  TYSSLI G   +GL E A ++F  M     + D+ ++NA L GLC +
Sbjct: 479 ELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMA 535

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            R D + E+   M+ +  +PNE T+ IL+  +  +  +  + +V +++
Sbjct: 536 ARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQM 583



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 229/436 (52%), Gaps = 13/436 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  M+     P+ V     +   C+   + +A++++E M   G  PD   Y+ LVN   +
Sbjct: 239 MREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSE 298

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  A++L+  M     P NTV YN+ ++GLC+ G   +  + +  +++K   PN  T
Sbjct: 299 HGRVDEALKLLNTM--LCRP-NTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDAT 355

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +S L+ +  + R V  A+++L+ +   G  P++VSYN +++    + R ++A++  + + 
Sbjct: 356 FSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML 415

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            K   P+ +S+N +L+ LC   RW +A EL+A+M   D     +T+NILI SL  +G+  
Sbjct: 416 CK---PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVK 472

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A++V + M K R  P   +Y+ +I     +G  ++       M    C+ +  +YN  L
Sbjct: 473 DAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATL 529

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC   +  +A  +I  +  +     +  +  +I+SLC+KG   +A  +  +M KYG T
Sbjct: 530 KGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGIT 589

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD +TY++LI G   +G +++AL+    M     +PD  ++N++L GLC++ R   + ++
Sbjct: 590 PDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKL 646

Query: 505 FQMMIEKGQMPNETTY 520
              M+ K   PNE T+
Sbjct: 647 VTEMLRKNCTPNEVTF 662



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 208/417 (49%), Gaps = 12/417 (2%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   S   L+  LC +  +  A +++E ++  G   + V++N+LV G C  G+L  + + 
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASG-AADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++     G   N  TY+ L++   +   +  A++L   I +    P+  +YN +L GLC 
Sbjct: 173 VEAARASG-TANVVTYTALIDGYCRSGRLADALRL---IASMPVAPDTYTYNTVLKGLCC 228

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + E+A    R++      PN V++   +R+ C  G  + A ELL +M     +P ++ 
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ L+   + HG+ D ALK+L+ M+    RP+   YN  +  LC  G+ + V + + +M 
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMV 345

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            + C PN+ T++ L   LC    V+ A  +++ +           Y  +I+    + +  
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARAD 405

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +LL  M      PD+ +++++++ LC      +A+E+   M + D + +   FN L+
Sbjct: 406 DALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILI 462

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             LC++ +   ++EVF++M +   MP+  TY+ L+ G + Q   E++ ++ + +  R
Sbjct: 463 DSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR 519



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 177/335 (52%), Gaps = 12/335 (3%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  MV K   P+    + L+  LC+   ++ A++V+E M   G +PD  SY  +++C   
Sbjct: 341 IAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSD 400

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +     A++L++ M       +T+++N++++ LC       +++ + ++++K    N  T
Sbjct: 401 QARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMT 457

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+++  +   V  A+++ + +      P++V+Y+ L+ G  ++G  E A   FR +P
Sbjct: 458 FNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP 517

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +    ++ SYN  L+ LCM  RW++A EL+A+M   D  P  VT+NILI SL   G  +
Sbjct: 518 CRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVN 574

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A+ V ++M K    P   +YN +I     +G++D  +K L  M    C+P+  +YN  L
Sbjct: 575 RAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSIL 631

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYV 418
             LC   + ++A  ++  +  K N +P E  +KY 
Sbjct: 632 KGLCRAERWKDAEKLVTEMLRK-NCTPNEVTFKYA 665


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 240/457 (52%), Gaps = 12/457 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSYT 137
           L+ A    E+MV  G     V    +++  CK  +++ A+  + EM    G  PD  ++ 
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN LCK G+V +A+++++ M   GY  +  TYNS++ GLC LG + ++++ LD++I +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  TY+ L+    KE  V  A +L   + +KG  P++ ++N L+ GLC       A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F ++ SKG EP+  +YN+L+ SLC +G+ +EA  +L +M+    + +++TYN LI  
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                KT  A ++ DEM       ++ +YN +I  LC   +V+   + +DQM     KP+
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           + TYN  L   C  G +++A  I+Q++ +         Y  +I+ LC+ G+   A +LL 
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKS 495
            +   G     + Y+ +I+GL  +    EA+ +F  M E+ +  PD  ++  +  GLC  
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG 659

Query: 496 -----RRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
                   D  +E    ++EKG +P  ++  +L EG+
Sbjct: 660 GGPIREAVDFLVE----LLEKGFVPEFSSLYMLAEGL 692



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 253/507 (49%), Gaps = 20/507 (3%)

Query: 45  LASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNL 104
           LAS +   SP+ ++Y +   + G       R    +D    LE M S   +        L
Sbjct: 72  LASKKPNFSPEPALYEEILLRLG-------RSGSFDDMKKILEDMKSSRCEMGTSTFLIL 124

Query: 105 LYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVE----KM 159
           +    +     + + V++ M+   G+ PD   Y  ++N L      G +++LVE    KM
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD----GNSLKLVEISHAKM 180

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
             +G   +  T+N L++ LC    L  ++  L+ +   GLVP+  T++ +++   +E  +
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNI 278
             A+++ + ++  G   + VS NV++ G CKEGR E+A+ F +++ ++ GF P+  ++N 
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+  LC  G  + A E++  M      P + TYN +I  L   G+   A++VLD+M+   
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
             P+  +YN +I+ LC E +V+   +    +  +   P+  T+N L   LC     + A 
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 398 AIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            + + + +K    P EF Y  +I SLC KGK  +A  +L +M   G      TY++LI G
Sbjct: 421 ELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            C      EA EIF  ME +    +   +N L+ GLCKSRR + + ++   MI +GQ P+
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539

Query: 517 ETTYTILVEGIAHQDELELSAEVLKEL 543
           + TY  L+       +++ +A++++ +
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAM 566



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 183/393 (46%), Gaps = 41/393 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A   L++M+++   P+ V    L+  LCK N++++A ++  ++ S GI+PD  ++ 
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC   N   AM+L E+M   G   +  TYN L+  LC  G L+++L  L ++   
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +  TY+ L++   K      A ++ D++   G   N V+YN L+ GLCK  R E+A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +    +  +G +P+  +YN LL   C  G  ++A +++  M      P IVTY  LI  
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A K+L  +       +  +YNP+I  L                F +R    
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL----------------FRKR---- 624

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR-KGKTYQAFQLL 435
                         K  EA  + + +  +  + P    Y+ V   LC   G   +A   L
Sbjct: 625 --------------KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
            E+ + GF P+   +SSL   +  EGL+  ++E
Sbjct: 671 VELLEKGFVPE---FSSLY--MLAEGLLTLSME 698


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 240/457 (52%), Gaps = 12/457 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSYT 137
           L+ A    E+MV  G     V    +++  CK  +++ A+  + EM    G  PD  ++ 
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN LCK G+V +A+++++ M   GY  +  TYNS++ GLC LG + ++++FLD++I +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITR 359

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  TY+ L+    KE  V  A +L   + +KG  P++ ++N L+ GLC       A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F ++ SKG EP+  +YN+L+ SLC +G+ +EA  +L +M+    + +++TYN LI  
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                K   A ++ DEM       ++ +YN +I  LC   +V+   + +DQM     KP+
Sbjct: 480 FCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPD 539

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           + TYN  L   C  G +++A  I+Q++ +         Y  +I+ LC+ G+   A +LL 
Sbjct: 540 KFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKS 495
            +   G     + Y+ +I+GL  +    EA+ +F  M E+ +  PD  ++  +  GLC  
Sbjct: 600 SIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNG 659

Query: 496 -----RRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
                   D  +E    ++EKG +P  ++  +L EG+
Sbjct: 660 GGPIREAVDFLVE----LLEKGFVPEFSSLYMLAEGL 692



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 264/541 (48%), Gaps = 14/541 (2%)

Query: 9   STLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRV--LASTQVTISPKDSVYTKPNRKP 66
           ST++  SP     +      + +L S + +   +R+  LAS +   SP+ ++Y +   + 
Sbjct: 34  STISFASPNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRL 93

Query: 67  GNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS 126
           G       R    +D    LE M + G +        L+    +     + + V+  M+ 
Sbjct: 94  G-------RSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMID 146

Query: 127 S-GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
             G+ PD   Y  ++N L    N+        KM  +G   +  T+N L++ LC    L 
Sbjct: 147 DFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
            ++  L+ +   GLVP+  T++ +++   +E  +  A+++ + ++  G   + VS NV++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266

Query: 246 TGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
            G CKEGR E+A+ F +++ ++ GF P+  ++N L+  LC  G  + A E++  M     
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P + TYN +I  L   G+   A++ LD+M+     P+  +YN +I+ LC E +V+   +
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSL 422
               +  +   P+  T+N L   LC     + A  + + + +K    P EF Y  +I SL
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSL 445

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C KGK  +A  +L +M   G      TY++LI G C    I EA EIF  ME +    + 
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNS 505

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N L+ GLCKSRR + + ++   MI +GQ P++ TY  L+       +++ +A++++ 
Sbjct: 506 VTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQA 565

Query: 543 L 543
           +
Sbjct: 566 M 566



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 181/385 (47%), Gaps = 41/385 (10%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L++M+++   P+ V    L+  LCK N++++A ++  ++ S GI+PD  ++  L+  LC 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             N   AM+L E+M   G   +  TYN L+  LC  G L+++L  L ++   G   +  T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++   K   +  A ++ D++   G   N V+YN L+ GLCK  R E+A +    + 
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G +P+  +YN LL   C  G  ++A +++  M      P IVTY  LI  L   G+ +
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A K+L  +       +  +YNP+I  L                F +R            
Sbjct: 593 VASKLLRSIQMKGIALTPHAYNPVIQGL----------------FRKR------------ 624

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR-KGKTYQAFQLLYEMTKYGF 443
                 K  EA  + + +  +  ++P    Y+ V   LC   G   +A   L E+ + GF
Sbjct: 625 ------KTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALE 468
            P+   +SSL   +  EGL+  ++E
Sbjct: 679 VPE---FSSLY--MLAEGLLTLSME 698


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 229/466 (49%), Gaps = 1/466 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A     RM+     P  V    LL  + K       + +   M S GI P+  +   
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    VG+A  ++ K+   G+  +T T+ +L+RG+ + G + ++L   D++I +G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY  L+    K     AA++LL  ++ K  +PN+ +YN ++  LCK+ +  EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG  P++ +YN L+ +LC    W+    LL EM      P +V++N ++ +L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A  V+D+M++    P+  +Y  ++   C   ++D  VK  D M  + C PN 
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +YN L    C + ++ +A  +   +  ++       Y  +I  LC   +   A  L +E
Sbjct: 342 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 401

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M      P+  TY  L+  LC    + EA+ +   +E  +  PD+   N  + G+C++  
Sbjct: 402 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 461

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + + ++F  +  KG  P+  TY+I++ G+  +  L+ ++++ +E+
Sbjct: 462 LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 507



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 235/475 (49%), Gaps = 1/475 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
            +M S G  P++     L+   C  N++  A  V+  ++  G  PD +++T L+  +  +
Sbjct: 85  HQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVE 144

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +G A+ L +KM   G+  + VTY +L+ GLC +GN + +++ L  ++QK   PN F Y
Sbjct: 145 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 204

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++++  K+R V  A  L  +++ KG  P++ +YN L+  LC     +       ++  
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 264

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               P+VVS+N ++ +LC EG+  EA++++ +M      P +VTY  L+       + D 
Sbjct: 265 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDE 324

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+KV D MV     P+  SYN +I   C   ++D  +    +M  +   P+  TY+ L  
Sbjct: 325 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 384

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC V ++Q+A A+   +           Y+ ++  LC+     +A  LL  +      P
Sbjct: 385 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 444

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D    +  I G+C  G +E A ++F  +     +PDV  ++ ++ GLC+    D + ++F
Sbjct: 445 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 504

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           + M E G   N   Y  +  G    +E   + ++L+E+  R   ++++   L ++
Sbjct: 505 REMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK 559



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 226/464 (48%), Gaps = 3/464 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L +++  GH+PD    T L+  +    K+ +A+ + + M+  G  PD  +Y  L+N
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK GN   A++L+  M       N   YN+++  LC    + ++      ++ KG+ P
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           + FTY+ L+ A            LL++++     P++VS+N ++  LCKEG+  EA    
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVV 294

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G EPNVV+Y  L+   C+    +EA ++   M      P +++YN LI      
Sbjct: 295 DKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D A+ +  EM +    P   +Y+ +I  LC   ++   +    +M      PN  TY
Sbjct: 355 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 414

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L   LC    + EA A+++++         +     I  +CR G+   A  L   ++ 
Sbjct: 415 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 474

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD +TYS +I GLC  GL++EA ++F  M+E     +   +N +  G  ++  T  
Sbjct: 475 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 534

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS-AEVLKEL 543
           ++++ Q M+ +G   + +T T+ V+ ++  D L+ S  ++L+E 
Sbjct: 535 AIQLLQEMVARGFSADASTMTLFVKMLS-DDGLDQSLKQILREF 577



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 188/400 (47%), Gaps = 34/400 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF     MV+KG  PD+    +L++ LC   + K    ++  MV S I+
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  S+  +V+ LCK+G V  A  +V+KM   G   N VTY +L+ G C+L  ++++++ 
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG +PN  +Y+ L+    K + +  AM L  ++  +   P+ V+Y+ L+ GLC 
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 388

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R ++AI  F ++ +    PN+V+Y ILL  LC      EA  LL  ++G +  P I  
Sbjct: 389 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 448

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
            NI I  +   G+ + A  +   +     +P   +Y+ +I  LC  G +D   K   +M 
Sbjct: 449 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 508

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C  N   YN                                   +     R  +T +
Sbjct: 509 ENGCTLNGCIYNT----------------------------------ITRGFLRNNETSR 534

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           A QLL EM   GF+ D+ T +  ++ L  +GL +   +I 
Sbjct: 535 AIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 574



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 187/379 (49%), Gaps = 1/379 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           ++ ++   +R+++    P+   ++ LL +  K +     + L   + + G  PN+ + ++
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C   R   A      +   G +P+  ++  L+R + +EG+  EA  L  +M G  
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  LI  L   G T  A+++L  MV+   +P+  +YN II  LC + +V    
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
               +M  +   P+  TYN L   LC + + +    ++  + + +       +  V+ +L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++GK  +A  ++ +M + G  P+  TY++L+ G C+   ++EA+++F  M      P+V
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            ++N L+ G CK +R D ++ +F  M  +  +P+  TY+ L+ G+ H + L+ +  +  E
Sbjct: 342 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 401

Query: 543 LQLRQVVSESAVERLVMQY 561
           +     +      R+++ Y
Sbjct: 402 MVACSQIPNLVTYRILLDY 420



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 35/301 (11%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   +++M+ +G +P+VV  T L+   C  ++M +A+KV + MV  G +
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SY  L+N  CK   +  AM L  +M       +TVTY++L+ GLC +  L  ++  
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 398

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL------------------------ 226
              ++    +PN  TY  LL+   K R +  AM LL                        
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 458

Query: 227 -----------DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                       ++ +KG +P++ +Y++++ GLC+ G  +EA + FR++   G   N   
Sbjct: 459 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 518

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN + R          A +LL EM     S    T  + +  L+  G      ++L E V
Sbjct: 519 YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFV 578

Query: 336 K 336
           +
Sbjct: 579 Q 579


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 232/474 (48%), Gaps = 36/474 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  +  ++ DA   +  M  +G  P +     LL DL +A+ M    KV E MV +GI 
Sbjct: 55  DTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGIS 114

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L+   CK      A +++ +M + G   NTVTYN L+ GLC  G + ++  F
Sbjct: 115 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   GLVP+ FTY  L+    K R  + A  LLD++     KPN+V Y  L+ G  +
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 234

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG  +EA +  +++ + G +PN ++Y+ L+R LC  G+ + A+ LL +M      P  +T
Sbjct: 235 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294

Query: 311 YNILI-GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           YN++I G   +H K D A ++L EM      P+  +Y+ +I  LC  G+ +     L++M
Sbjct: 295 YNLIIEGHFRHHNKKD-AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 353

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
             +  KPN                  AF                 Y  +I+  CR+G   
Sbjct: 354 TTKGLKPN------------------AFV----------------YAPLISGYCREGNVS 379

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A ++  +MTK    PD Y Y+SLI GL   G +EE+ + F  M+E    P+   ++ L+
Sbjct: 380 LACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLI 439

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G  K+   + + ++ Q M++ G  PN+  Y  L+E     D++E  +   K +
Sbjct: 440 HGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 208/410 (50%), Gaps = 9/410 (2%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV+   K G V  A ++V  M D G   +    N+L++ L     +    +  + ++  G
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+ +TYS L+EA  K R    A K+L ++  +G   N V+YNVL+ GLC+ G  EEA 
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F +D+   G  P+  +Y  L+  LC   R  EA  LL EM   +  P +V Y  LI   
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  D A K++ EMV    +P+  +Y+ ++  LC  G++D     L QM     +P+ 
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292

Query: 379 GTYNGLAMLCGVGKV-----QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            TYN    L   G       ++AF ++  + N   S     Y  +I  LC+ G+  +A  
Sbjct: 293 ITYN----LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EMT  G  P+++ Y+ LI G C EG +  A EIF  M + +  PD+  +N+L+ GL 
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K  R + S + F  M E+G +PNE TY+ L+ G     +LE + ++++ +
Sbjct: 409 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 223/484 (46%), Gaps = 39/484 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H   DAF  L  M + G  P+V   + +++ LC++ + +KA  ++E M + G+ P+A 
Sbjct: 304 RHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 363

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++  C++GNV  A ++ +KM       +   YNSL+ GL  +G + +S ++  ++
Sbjct: 364 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 423

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++GL+PN FTYS L+    K   + +A +L+  ++  G KPN V Y  LL    K    
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+    F+ +  +G   +   Y IL+ +L   G  E A  +L+E++     P +  Y+ L
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSL 543

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L      + A  +LDEM K    P+   YN +I  LC  G +       + +  +  
Sbjct: 544 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 603

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            PN  TY  L                                  I   C+ G    AF L
Sbjct: 604 VPNCVTYTSL----------------------------------IDGSCKVGDISNAFYL 629

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY-DYKPDVDNFNALLLGLC 493
             EM   G TPD++ YS L  G    G +E+A+  F++ E +      + +FN L+ G C
Sbjct: 630 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM--FLIEEMFLRGHASISSFNNLVDGFC 687

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K  +   +L++  +++ +G +PN  T   ++ G++   +L     +  ELQ  Q  SESA
Sbjct: 688 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ--QKTSESA 745

Query: 554 VERL 557
               
Sbjct: 746 ARHF 749



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+++L  +  M+ A +V+  +  +G +PD   Y+ L++ LCK  +   A  ++++M   G
Sbjct: 508 LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N V YN+L+ GLC  G+++ +    + ++ KGLVPN  TY+ L++ + K   +  A 
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 627

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L ++++A G  P+   Y+VL TG    G  E+A+    ++  +G   ++ S+N L+   
Sbjct: 628 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGF 686

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G+ +E  +LL  + G    P  +T   +I  L+  GK      +  E+ +     +A
Sbjct: 687 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 746

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
             ++ +   + ++GK+ L V  +D M    CK  EG  +   ML  V   + A     S 
Sbjct: 747 RHFSSLFMDMINQGKIPLDV--VDDMIRDHCK--EGNLDKALMLRDVIVAKSAPMGCSS- 801

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
                      Y  ++ +LCRKGK  +A  LL EM K G
Sbjct: 802 -----------YLAIVDNLCRKGKLSEALNLLKEMDKRG 829



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/483 (22%), Positives = 197/483 (40%), Gaps = 55/483 (11%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M +KG KP+      L+   C+   +  A ++ + M    ++PD   Y  L+  L K
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 409

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  + +   +M++ G   N  TY+ L+ G    G+L  + Q + R++  GL PN   
Sbjct: 410 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 469

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  LLE+ +K   +         ++ +G   +   Y +L+  L   G  E A R   ++ 
Sbjct: 470 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+V  Y+ L+  LC     E+A  +L EM      P IV YN LI  L   G   
Sbjct: 530 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 589

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           +A  V + ++     P+  +Y  +I   C  G +       ++M      P+   Y+ L 
Sbjct: 590 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 649

Query: 386 MLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             C   G +++A  +I+ +  + ++S   F   ++   C++GK  +  +LL+ +   G  
Sbjct: 650 TGCSSAGDLEQAMFLIEEMFLRGHASISSFNN-LVDGFCKRGKMQETLKLLHVIMGRGLV 708

Query: 445 PDSYTYSSLIRGL----------------------------------------------- 457
           P++ T  ++I GL                                               
Sbjct: 709 PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVD 768

Query: 458 ------CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
                 C EG +++AL +  V+          ++ A++  LC+  +   +L + + M ++
Sbjct: 769 DMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 828

Query: 512 GQM 514
           G +
Sbjct: 829 GNL 831



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 119/242 (49%), Gaps = 22/242 (9%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +++KG  P+ V  T+L+   CK   +  A  +   M+++GI PDA  Y+ L       G+
Sbjct: 598 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 657

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  AM L+E+M   G+ + + ++N+LV G C  G + ++L+ L  ++ +GLVPNA T   
Sbjct: 658 LEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 716

Query: 209 L---LEAAYKERGVHAAM----------------KLLDDIIAKGGKPNLVSYNVLLTGLC 249
           +   L  A K   VH                    L  D+I +G  P L   + ++   C
Sbjct: 717 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHC 775

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG-GDRSPTI 308
           KEG  ++A+     + +K       SY  ++ +LC +G+  EA  LL EMD  G+  PT+
Sbjct: 776 KEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTL 835

Query: 309 VT 310
           V 
Sbjct: 836 VA 837


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 227/453 (50%), Gaps = 1/453 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A + L RMV  G  P+ +   +LL+  C + K   AI V + M   G+ PD  +Y  
Sbjct: 254 MDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNT 313

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  LCK G    A ++ + M   G+  N+ TY +L+ G    G+L +    LD +++ G
Sbjct: 314 LMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNG 373

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+ + ++ L+    K   V  AM L   +  +G  P+ V+Y +++  LC  G+ ++A+
Sbjct: 374 IQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAM 433

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  L S+G  P+ V +  L+  LC   +W++A EL  EM G    P  + +N L+  L
Sbjct: 434 AQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHL 493

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A  + D MV+   +    +YN +I   C  GKVD   K L+ M     KPNE
Sbjct: 494 CKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNE 553

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN +    C  G++++AF++ + + +K  +     Y  ++  L +  +T  A +L   
Sbjct: 554 VTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLW 613

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M K G   D  TY+ ++ GLC     ++AL IF  +   D+  +   FN ++  L K  R
Sbjct: 614 MIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGR 673

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            D + ++F  ++ +G +PN  TY ++++ +  Q
Sbjct: 674 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 706



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/562 (23%), Positives = 232/562 (41%), Gaps = 95/562 (16%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-----MEMMV 125
           D+ H  H  ++            H+P      +L   L  A +   A+ +     M M+ 
Sbjct: 34  DSHHAHHAFDELL----------HRPTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVA 83

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
              + P+  +Y+ +++C  + G++  A   + ++   G+    +T++ L++ LC     +
Sbjct: 84  RPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTS 143

Query: 186 QSLQF-LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII----AKGG-KPNLV 239
           +++   L R+   G  PN F+Y+ LL+    E     A+ LL  ++     +GG  P++V
Sbjct: 144 EAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVV 203

Query: 240 SYNVLLTGLCKEGRT-EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           SYN ++ GL +EGR  + A   F  +  +G  P+VV+YN ++ +L      ++A  +L  
Sbjct: 204 SYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVR 263

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P  +T+N L+      GK + A+ V   M +    P   +YN ++  LC  G+
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGR 323

Query: 359 VDLVVKCLDQMFHRRCKPNEGTY-------------------------NGLA-------M 386
                K  D M  R  KPN  TY                         NG+        +
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNI 383

Query: 387 LCGV----GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKY 441
           L G     GKV +A  +   +  +Q  +P    Y  V+ +LC  GK   A      +   
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKM-RRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE 442

Query: 442 GFTPDSYTYSSLIRGLCM-----------------------------------EGLIEEA 466
           G TPD+  + +LI GLC                                    EG++  A
Sbjct: 443 GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARA 502

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             IF +M   D + DV  +N L+ G C   + D + ++ + M+  G  PNE TY  ++ G
Sbjct: 503 KNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMING 562

Query: 527 IAHQDELELSAEVLKELQLRQV 548
                 +E +  + +++  + V
Sbjct: 563 YCKNGRIEDAFSLFRQMASKGV 584



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 172/377 (45%), Gaps = 1/377 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + MV +GHKP+      LL+       + K   +++MMV +GI PD   +  L+    K
Sbjct: 331 FDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTK 390

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  AM L  KM   G   +TVTY  ++  LCM+G ++ ++    RLI +GL P+A  
Sbjct: 391 HGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVV 450

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +  L+           A +L  ++I +G  PN + +N LL  LCKEG    A   F  + 
Sbjct: 451 FRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMV 510

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
               + +V++YN L+   C+ G+ +EA +LL  M      P  VTYN +I     +G+ +
Sbjct: 511 RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIE 570

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +  +M      P   +Y+ I+  L    +     +    M     K + GTYN + 
Sbjct: 571 DAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIIL 630

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
           + LC      +A  I Q+L           +  +I +L + G+  +A  L   +   G  
Sbjct: 631 LGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLV 690

Query: 445 PDSYTYSSLIRGLCMEG 461
           P+  TY  +++ L  +G
Sbjct: 691 PNVVTYWLMMKSLIEQG 707



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 179/379 (47%), Gaps = 3/379 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++DA L   +M  +G  PD V    ++  LC   K+  A+     ++S G+ PDA  + 
Sbjct: 393 KVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFR 452

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC +     A +L  +M   G   N + +N+L+  LC  G + ++    D +++ 
Sbjct: 453 NLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRV 512

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            +  +  TY+ L++       V  A KLL+ ++  G KPN V+YN ++ G CK GR E+A
Sbjct: 513 DVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDA 572

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              FR + SKG  P +V+Y+ +L+ L    R   A EL   M        I TYNI++  
Sbjct: 573 FSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLG 632

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +  TD AL++   +    F     ++N +I  L   G+ D        +  R   PN
Sbjct: 633 LCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPN 692

Query: 378 EGTYNGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
             TY  L M  L   G ++E   +  SL     ++       ++  L +KG+  +A   L
Sbjct: 693 VVTY-WLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYL 751

Query: 436 YEMTKYGFTPDSYTYSSLI 454
            ++ +  F+ ++ T  SL+
Sbjct: 752 SKIDENNFSLEASTAESLV 770



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 88/196 (44%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ DAF    +M SKG  P +V  + +L  L +A +   A ++   M+ SGI  D  
Sbjct: 565 KNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIG 624

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  LC+      A+++ + +    +     T+N ++  L   G  +++      L
Sbjct: 625 TYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASL 684

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +GLVPN  TY  ++++  ++  +     L   +   G   N    N L+  L ++G  
Sbjct: 685 LARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEV 744

Query: 255 EEAIRFFRDLPSKGFE 270
            +A  +   +    F 
Sbjct: 745 RKAGVYLSKIDENNFS 760


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 248/495 (50%), Gaps = 5/495 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDA 133
           R  +L+  F  L  ++ KG + D +  T LL  LC   +   A+  V+  M   G IP+ 
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMED---YGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            SY  L+  LC +     A++L+  M D    G P + V+Y +++ G    G+ +++   
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ +G++P+  TY+ ++ A  K + +  AM++L+ ++  G  P+ ++YN +L G C 
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EAI F + + S G EP+VV+Y++L+  LC  GR  EA ++   M      P I T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+   A  G       +LD MV+    P    ++ +I    ++GKVD  +    +M 
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMR 398

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +   PN  TY   + +LC  G+V++A    + + ++  S     Y  +I  LC   K  
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A +L+ EM   G   ++  ++S+I   C EG + E+ ++F +M     KP+V  +N L+
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            G C + + D ++++   M+  G  PN  TY+ L+ G      +E +  + KE++   V 
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578

Query: 550 SESAVERLVMQYDFE 564
            +     +++Q  F+
Sbjct: 579 PDIITYNIILQGLFQ 593



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 244/485 (50%), Gaps = 9/485 (1%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV---SSGIIP 131
           D + +DA  + L RM   G  P+V     LL  LC  N+ ++A++++ MM      G  P
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  SYT ++N   K+G+   A     +M D G   + VTYNS++  LC    ++++++ L
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           + +++ G++P+  TY+ +L           A+  L  + + G +P++V+Y++L+  LCK 
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR  EA + F  +  +G +P + +Y  LL+    +G   E + LL  M      P    +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           +ILI + A  GK D A+ V  +M +    P+A +Y  +I  LC  G+V+  +   +QM  
Sbjct: 375 SILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
               P    YN L   LC   K + A  +I  + ++       F+  +I S C++G+  +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           + +L   M + G  P+  TY++LI G C+ G ++EA+++   M     KP+   ++ L+ 
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           G CK  R + +L +F+ M   G  P+  TY I+++G+             KEL +R   S
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR----TAAAKELYVRITES 610

Query: 551 ESAVE 555
            + +E
Sbjct: 611 GTQIE 615



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 228/461 (49%), Gaps = 1/461 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   ++ A   L  MV  G  PD +   ++L+  C + + K+AI  ++ M S G+ PD  
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVV 302

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++ LCK G    A ++ + M   G      TY +L++G    G L +    LD +
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ P+ + +S L+ A   +  V  AM +   +  +G  PN V+Y  ++  LCK GR 
Sbjct: 363 VRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+ +F  +  +G  P  + YN L+  LC   +WE A EL+ EM         + +N +
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I S    G+   + K+ + MV+   +P+  +YN +I   C  GK+D  +K L  M     
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPN  TY+ L    C + ++++A  + + + +   S     Y  ++  L +  +T  A +
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   +T+ G   +  TY+ ++ GLC   L ++AL++F  +   D K +   FN ++  L 
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           K  R D + ++F      G +PN  TY ++ E I  Q  LE
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 184/378 (48%), Gaps = 1/378 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++ A L   +M  +G  P+ V    ++  LCK+ +++ A+   E M+  G+ P    Y 
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC       A +L+ +M D G   NT+ +NS++   C  G + +S +  + +++ 
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  TY+ L+        +  AMKLL  +++ G KPN V+Y+ L+ G CK  R E+A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F+++ S G  P++++YNI+L+ L    R   A EL   +        + TYNI++  
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +  TD AL++   +     +  A ++N +I  L   G+ D               PN
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  +A  + G G ++E   +  S+ +   +       +++  L ++G+  +A   L 
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745

Query: 437 EMTKYGFTPDSYTYSSLI 454
            + +  F+ ++ T S  I
Sbjct: 746 MIDEKHFSLEASTASLFI 763



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 161/388 (41%), Gaps = 75/388 (19%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM---------- 285
           P+L +Y +L+   C+ GR +       ++  KGF  + +++  LL+ LC           
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 286 --------------------------EGRWEEANELL---AEMDGGDRSPTIVTYNILIG 316
                                     E R +EA ELL   A+  GG   P +V+Y  +I 
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G +D A     EM+     P   +YN IIA LC    +D  ++ L+ M      P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TYN  L   C  G+ +EA   ++ + +         Y  ++  LC+ G+  +A ++ 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 436 YEMTKYGFTPDSYTYSSLIRG--------------------------------LCM---E 460
             MTK G  P+  TY +L++G                                +C    +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G +++A+ +F  M +    P+   + A++  LCKS R + ++  F+ MI++G  P    Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQV 548
             L+ G+   ++ E + E++ E+  R +
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGI 472



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 143/320 (44%), Gaps = 35/320 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI---------------- 118
           +  ++ DA L  E+M+ +G  P  +   +L++ LC  NK ++A                 
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 119 -------------------KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM 159
                              K+ E+MV  G+ P+  +Y  L+N  C  G +  AM+L+  M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
              G   NTVTY++L+ G C +  +  +L     +   G+ P+  TY+ +L+  ++ R  
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
            AA +L   I   G +  L +YN++L GLCK   T++A++ F++L     +    ++NI+
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           + +L   GR +EA +L          P   TY ++  ++   G  +   ++   M     
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717

Query: 340 RPSAASYNPIIARLCSEGKV 359
              +   N I+  L   G++
Sbjct: 718 TVDSGMLNFIVRELLQRGEI 737



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 13/281 (4%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL-----LAEMDGGDRSPTIV 309
           E+A   F +L  +G   ++   N   R+L    R   A  +     +A     + +P + 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLN---RALADVARDSPAAAVSRYNRMARAGADEVTPDLC 88

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQ 368
           TY ILIG     G+ D     L  ++K  FR  A ++ P++  LC++ +  D +   L +
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG-NKQNSSPQEFYKY--VITSLCR 424
           M    C PN  +YN L   LC   + QEA  ++  +  ++   SP +   Y  VI    +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +G + +A+   +EM   G  PD  TY+S+I  LC    +++A+E+   M +    PD   
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           +N++L G C S +   ++   + M   G  P+  TY++L++
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 1/288 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++ ++ ++    E MV  G KP+V+    L+   C A KM +A+K++  MVS G+ 
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L+N  CK   +  A+ L ++ME  G   + +TYN +++GL        + + 
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ + G      TY+ +L    K +    A+++  ++     K    ++N+++  L K
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR +EA   F    S G  PN  +Y ++  ++  +G  EE ++L   M+    +     
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 723

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
            N ++  L   G+   A   L  + +  F   A++ +  I  L S GK
Sbjct: 724 LNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI-DLLSGGK 770


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 232/477 (48%), Gaps = 15/477 (3%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           TR RD KL+DA      MV     P +V    LL  + K  K    I + + M   GI  
Sbjct: 59  TRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRN 118

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  ++  ++NC C    V  A+ ++ KM   GY  + VT  SLV G C    ++ ++  +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           D++++ G  P+   Y+ ++++  K R V+ A+    +I  KG +PN+V+Y  L+ GLC  
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR  +A R  RD+  +   PNV++Y+ LL +    G+  EA E+  EM      P IVTY
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           + LI  L  H + D A ++ D MV     P   SYN +I   C   +V+  +K   +M  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358

Query: 372 RRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKG 426
           R    N  TYN    G   +  V K QE F+ + S G     SP  + Y  ++  LC  G
Sbjct: 359 RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFG----VSPDIWTYNILLGGLCDNG 414

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              +A  +  +M K     D  TY+++I+G+C  G +E+A  +F  +     KPD+  + 
Sbjct: 415 LLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYT 474

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            ++ GLC          ++  M ++G M N++   +         ++ +SAE++K++
Sbjct: 475 TMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLCL------GDGDITISAELIKKM 525



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 148/287 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  ++NDA    + +  KG +P+VV  T L+  LC + +   A +++  M+   I 
Sbjct: 198 DSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKIT 257

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++   K G V  A ++ E+M       + VTY+SL+ GLC+   ++++ Q 
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG  P+  +Y+ L+    K + V   MKL   +  +G   N V+YN L+ G  +
Sbjct: 318 FDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQ 377

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A  FF  + S G  P++ +YNILL  LC  G  E+A  +  +M   +    IVT
Sbjct: 378 VGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVT 437

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           Y  +I  +   GK + A  +   +     +P   +Y  +++ LC++G
Sbjct: 438 YTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 160/362 (44%), Gaps = 1/362 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ ++     +++    P+   ++ LL A  K +     + L   +   G + +L ++N+
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++   C   +   A+     +   G+EP+ V+   L+   C   R  +A  L+ +M    
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P IV YN +I SL    + + AL    E+ +   RP+  +Y  ++  LC+ G+ +   
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           + L  M  R+  PN  TY+ L       GKV EA  I + +           Y  +I  L
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C   +  +A Q+   M   G  PD  +Y++LI G C    +E+ +++F  M +     + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNT 365

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N L+ G  +    D + E F  M   G  P+  TY IL+ G+     LE +  + ++
Sbjct: 366 VTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFED 425

Query: 543 LQ 544
           +Q
Sbjct: 426 MQ 427



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 149/316 (47%), Gaps = 1/316 (0%)

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           ++ +  +AI  FR++      P++V +N LL ++    +++    L  +M+       + 
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+NI+I       +   AL VL +M+K  + P   +   ++   C   +V   V  +D+M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                +P+   YN +   LC   +V +A    + +G K        Y  ++  LC  G+ 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A +LL +M K   TP+  TYS+L+      G + EA EIF  M      PD+  +++L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + GLC   R D + ++F +M+ KG  P+  +Y  L+ G      +E   ++ +++  R +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 549 VSESAVERLVMQYDFE 564
           V+ +     ++Q  F+
Sbjct: 362 VNNTVTYNTLIQGFFQ 377


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 248/514 (48%), Gaps = 41/514 (7%)

Query: 69  NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG 128
           N+D +H    L  +F +L  +  K  KP + Q   +L  L K+N     + +   M  +G
Sbjct: 48  NDDNKHN---LVSSFNRL--LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNG 102

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           I  D    + L+NC  + G    +  ++ K+   GY  N +T  +L++GLC+ G ++Q+L
Sbjct: 103 ITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQAL 162

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           QF D+++  G   N  +Y  L+    K     AA++LL  +  K  +PN+V YN ++  +
Sbjct: 163 QFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 222

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CK     EA   + ++ SKG  P+VV+YN L+   C+ G+ ++A +L  +M   + +P +
Sbjct: 223 CKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNV 282

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC-------------- 354
            T+NIL+       +   A  VL  M+K   +P   +YN ++ R C              
Sbjct: 283 YTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNT 342

Query: 355 -SEGKVDLVVKCLDQMFHRRCK--------------------PNEGTYNGLA-MLCGVGK 392
            S+  V+  +     M H  CK                    P+  TYN L   LC +GK
Sbjct: 343 ISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGK 402

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +  A  ++  + ++     +  Y  ++ +LC+  +  +A  LL +M   G  PD  TY++
Sbjct: 403 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTT 462

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ GLC  G +E+A  +F  +    Y  DV+ + A++ G C     D SL++   M E G
Sbjct: 463 LVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENG 522

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +PN  TY I++  +  +DE + + ++L+E+  R
Sbjct: 523 CIPNAVTYEIIICSLFDKDENDKAEKLLREMITR 556



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 216/432 (50%), Gaps = 1/432 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +F  L +++  G++P+V+  T L+  LC   ++ +A++  + +V+ G   +  SY  L+N
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G    A+QL+ +++      N V YN+++  +C +  +N++      ++ KG+ P
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ L+        +  A  L + +I +   PN+ ++N+L+ G CKE R +EA    
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G +P+V +YN L+   C+     +A  +   +     +P I +Y+I+I      
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            K D A+ +  EM      P   +YN +I  LC  GK+   +K +D+M  R    ++ TY
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITY 425

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N  L  LC   +V +A A++  + ++        Y  ++  LC+ G+   A  +  ++  
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV 485

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G+  D   Y+++I+G C  GL +E+L++   MEE    P+   +  ++  L      D 
Sbjct: 486 KGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDK 545

Query: 501 SLEVFQMMIEKG 512
           + ++ + MI +G
Sbjct: 546 AEKLLREMITRG 557



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 207/431 (48%), Gaps = 1/431 (0%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +  ++  L K  +    + L  +ME  G  ++ V  + L+     LG    S   
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L ++++ G  PN  T + L++    +  +H A++  D ++A G   N VSY  L+ GLCK
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+T  A++  R +  K  +PNVV YN ++ S+C      EA +L +EM     SP +VT
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI      GK   A  + ++M+     P+  ++N ++   C E ++      L  M 
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +  KP+  TYN L    C V +V +A  I  ++  +  +     Y  +I   C+  K  
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A  L  EM      PD  TY+SLI GLC  G I  AL++   M +     D   +N++L
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             LCK+ + D ++ +   M ++G  P+  TYT LV+G+     LE +  V ++L ++  +
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489

Query: 550 SESAVERLVMQ 560
            +  +   ++Q
Sbjct: 490 LDVNIYTAMIQ 500



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 97/192 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A    + M      PDVV   +L+  LCK  K+  A+K+++ M   G+  D  +Y 
Sbjct: 367 KVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYN 426

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A+ L+ KM+D G   +  TY +LV GLC  G L  +    + L+ K
Sbjct: 427 SILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVK 486

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G + +   Y+ +++          ++ LL  +   G  PN V+Y +++  L  +   ++A
Sbjct: 487 GYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKA 546

Query: 258 IRFFRDLPSKGF 269
            +  R++ ++G 
Sbjct: 547 EKLLREMITRGL 558



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 67/129 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H+++ A   L +M  +G +PD+   T L+  LCK  +++ A  V E ++  G I
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D + YT ++   C  G    ++ L+ KME+ G   N VTY  ++  L      +++ + 
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKL 549

Query: 191 LDRLIQKGL 199
           L  +I +GL
Sbjct: 550 LREMITRGL 558


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 241/470 (51%), Gaps = 14/470 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYD-----LCKANKMKKAIKVMEMMVSSGIIPDASS 135
           DA     RMV +    D V  T   +      LC+  +  +A+ ++  M   G +PDA  
Sbjct: 157 DALALYRRMVHR----DRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVL 212

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +++ LC +G V  A  L+ +M   G   +  T++ +VRG+C LG + ++ + +DR++
Sbjct: 213 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 272

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            KG +P   TY FLL+   + R    A  +L  +     + N+V +N ++ G   EG+  
Sbjct: 273 TKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV----PELNVVLFNTVIGGCLAEGKLA 328

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA   +  +  KG +P+  +Y+IL+  LC  GR   A  LL EM+    +P +VTY I++
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVL 388

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            S   +G  D    +L+EM       ++  YN +I  LC +G++D  +  + +M  + C 
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  +YN +   LC   +++EA  + ++L  +   +    Y  +I +L R G+   A +L
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM  +G + D  +Y+ LI+ +C +G ++ +L +   M E   KP+  ++N L+  LCK
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 568

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            RR   +LE+ + M+ +G  P+  TY  L+ G+     +  +  +L++L 
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 618



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 196/420 (46%), Gaps = 65/420 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA-------------------------- 111
           ++ +A   ++RM++KG  P V+    LL  LC+                           
Sbjct: 260 RVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIG 319

Query: 112 -----NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT 166
                 K+ +A ++ E M   G  PDA +Y+ L++ LCK G +  A++L+ +ME  G+  
Sbjct: 320 GCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAP 379

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N VTY  ++   C  G  + +   L+ +  KGL  N+  Y+ ++ A  K+  +  AM L+
Sbjct: 380 NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLI 439

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            ++ ++G  P++ SYN ++  LC   + EEA   F +L  +G   N ++YN ++ +L  +
Sbjct: 440 QEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRD 499

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GRW++A  L  EM     S  +V+YN LI ++   G  D +L +L+EM +   +P+  SY
Sbjct: 500 GRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSY 559

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
           N +I+ LC E +V   ++   QM ++   P+  TYN L                      
Sbjct: 560 NILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL---------------------- 597

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                       I  LC+ G  + A  LL ++      PD  TY+ LI   C   L+++A
Sbjct: 598 ------------INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 152/297 (51%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ A   L  M  KG  P+VV  T +L+  CK         ++E M + G+  ++  Y 
Sbjct: 361 RISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK G +  AM L+++M   G   +  +YN+++  LC    + ++    + L+++
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+V N  TY+ ++ A  ++     A++L  ++I  G   ++VSYN L+  +CK+G  + +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++  KG +PN VSYNIL+  LC E R  +A EL  +M     +P IVTYN LI  
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           L   G    AL +L+++      P   +YN +I+  C    +D     L++     C
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 194/420 (46%), Gaps = 41/420 (9%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQ 186
           G+ P   SY  +++ L +      A+ L  +M      P  T T+    R LC LG  N+
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +L  L  + + G VP+A  Y  ++ A   + GV  A  LL++++  G   ++ +++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           G+C  GR  EA R    + +KG  P V++Y  LL+ LC   + +EA  +L       R P
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG------RVP 307

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            +   N+++                              +N +I    +EGK+    +  
Sbjct: 308 EL---NVVL------------------------------FNTVIGGCLAEGKLAEATELY 334

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           + M  + C+P+  TY+ L   LC +G++  A  +++ +  K  +     Y  V+ S C+ 
Sbjct: 335 ETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKN 394

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G       LL EM+  G T +S  Y+ +I  LC +G ++EA+ +   M      PD+ ++
Sbjct: 395 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSY 454

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           N ++  LC + + + +  +F+ ++E+G + N  TY  ++  +      + +  + KE+ L
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 129/222 (58%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D ++++A   ++ M S+G  PD+     ++Y LC   +M++A  + E ++  G++ +  
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ L + G    A++L ++M  +G   + V+YN L++ +C  GN+++SL  L+ +
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG+ PN  +Y+ L+    KER V  A++L   ++ +G  P++V+YN L+ GLCK G  
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
             A+     L ++   P++++YNIL+   C     ++A  LL
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 169/368 (45%), Gaps = 7/368 (1%)

Query: 186 QSLQFLDRLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNV 243
           ++L  LD+L ++ G+ P+  +Y+ +L    +      A+ L   ++ +    P   ++ V
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
               LC+ GR  EA+   R +   G  P+ V Y  ++ +LC +G   EA  LL EM    
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
            +  + T++ ++  +   G+   A +++D M+     P   +Y  ++  LC   + D   
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA- 299

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
                M  R  + N   +N +   C   GK+ EA  + +++G K        Y  ++  L
Sbjct: 300 ---RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ G+   A +LL EM K GF P+  TY+ ++   C  G+ ++   +   M       + 
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N ++  LCK  R D ++ + Q M  +G  P+  +Y  ++  + + +++E +  + + 
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 543 LQLRQVVS 550
           L    VV+
Sbjct: 477 LLEEGVVA 484



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 139/299 (46%), Gaps = 7/299 (2%)

Query: 257 AIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIVTYNIL 314
           A+     LP + G +P+  SYN++L  L       +A  L   M   DR  PT  T+ + 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
             +L   G+ + AL +L  M +    P A  Y  +I  LC +G V      L++M    C
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  T++ +   +CG+G+V+EA  ++  +  K        Y +++  LCR  +  +A  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  + +         ++++I G   EG + EA E++  M     +PD   ++ L+ GLC
Sbjct: 302 MLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           K  R   ++ + + M +KG  PN  TYTI++         + +  +L+E+  + +   S
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 19/196 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +  DA    + M+  G   DVV    L+  +CK   + +++ ++E M   GI P+  
Sbjct: 498 RDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV 557

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++ LCK+  V  A++L ++M + G   + VTYN+L+ GLC +G ++ +L  L++L
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + + P+  TY+ L+         H  ++LLDD          +  N  +  +C  G  
Sbjct: 618 HNENVHPDIITYNILISW-------HCKVRLLDDAA--------MLLNRAMAAVCPVGDR 662

Query: 255 EEAIRFFRDLPSKGFE 270
               R  + LP K F+
Sbjct: 663 ----RIMQILPDKNFK 674


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 239/475 (50%), Gaps = 2/475 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA   L  M   G  PDVV    LL   C+   + +A  ++  M   GI P  ++Y  
Sbjct: 226 LADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNT 285

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV+   + G +  A  +VE M  +G+  +  TYN L  GLC  G ++++ +  D +    
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLS 345

Query: 199 LV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           +V P+  TY+ L++A +K +    A+ LL+++  KG K +LV++N+++ GLC+EG+ EEA
Sbjct: 346 IVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEA 405

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   + +  +G  P+V++YN L+ + C      +A  L+ EM          T N L+ +
Sbjct: 406 LGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 465

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + + A ++L    +  F P   SY  ++A    E K +  +   D+M  R+  P+
Sbjct: 466 LCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPS 525

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L   LC +GK+ EA   +  L  K        Y  +I + C++G   +AFQ   
Sbjct: 526 IYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 585

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M +  F PD  T ++L+ GLC+ G +E+A+++F    E   K DV  +N L+  LCK  
Sbjct: 586 KMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDG 645

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             D +L  F  M  +G  P+  TY +++  ++     E +  +L +L     +SE
Sbjct: 646 DVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSE 700



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 234/490 (47%), Gaps = 38/490 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDASSYTYLVNCLC 144
           +E M + G +PD+     L   LC+A K+ +A K+ + M    I+ PD  +Y  LV+   
Sbjct: 303 VEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACF 362

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K      A+ L+E+M D G  ++ VT+N +V+GLC  G L ++L  L  + ++GL P+  
Sbjct: 363 KYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVI 422

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+ L++A  K R V  A  L+D+++  G K +  + N LL  LCKE R EEA    R  
Sbjct: 423 TYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP 482

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
           P +GF P+ VSY  ++ +   E + E A  L  EM     +P+I TYN LI  L   GK 
Sbjct: 483 PQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKL 542

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A+  L+E++K    P   +YN II   C EG ++   +  ++M     KP+  T N L
Sbjct: 543 TEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTL 602

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC  GK+++A  + +S   K        Y  +I +LC+ G    A     +M   G 
Sbjct: 603 MNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGL 662

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE-------YDY--------------KPDV 482
            PD++TY+ ++  L   G  EEA  +   ++E       + Y               P+V
Sbjct: 663 QPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEV 722

Query: 483 ---------------DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
                          +++N  +  LC   +   +  V   M++KG   + +TY  L+EG+
Sbjct: 723 KSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782

Query: 528 AHQDELELSA 537
             + + +  A
Sbjct: 783 IKRQKRQTHA 792



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 221/458 (48%), Gaps = 2/458 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L++  C    +  A+  +  M   G+ PD  +Y  L+   C+KG +G A  L+ +M+  G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
                 TYN+LV     LG + Q+   ++ +   G  P+ +TY+ L     +   V  A 
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335

Query: 224 KLLDDIIAKG-GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           KL D++       P++V+YN L+    K  R+ +A+    ++  KG + ++V++NI+++ 
Sbjct: 336 KLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKG 395

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC EG+ EEA   L  M     +P ++TYN LI +         A  ++DEMV+   +  
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQ 401
             + N ++  LC E + +   + L     R   P+E +Y   +A      K + A  +  
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWD 515

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  ++ +     Y  +I  LC  GK  +A   L E+ K G  PD  TY+ +I   C EG
Sbjct: 516 EMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEG 575

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +E+A +    M E  +KPDV   N L+ GLC   + + ++++F+   EKG+  +  TY 
Sbjct: 576 DLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYN 635

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            L++ +    +++ +     +++ R +  ++    +V+
Sbjct: 636 TLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVL 673



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 195/415 (46%), Gaps = 37/415 (8%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA   LE M  KG K  +V    ++  LC+  ++++A+  ++MM   G+ PD  +Y  L
Sbjct: 368 SDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTL 427

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  CK  NV  A  L+++M   G   +T T N+L+  LC      ++ + L    Q+G 
Sbjct: 428 IDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGF 487

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           VP+  +Y  ++ A +KE     A+ L D++  +   P++ +YN L+ GLC  G+  EAI 
Sbjct: 488 VPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAID 547

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              +L  KG  P+  +YNI++ + C EG  E+A +   +M      P +VT N L+  L 
Sbjct: 548 KLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLC 607

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
            HGK + A+K+ +   +   +    +YN +I  LC +G VD  +     M  R  +P+  
Sbjct: 608 LHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAF 667

Query: 380 TYN-GLAMLCGVGKVQEAFAIIQSL----------------------------------- 403
           TYN  L+ L   G+ +EA  ++  L                                   
Sbjct: 668 TYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCE 727

Query: 404 -GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            G       QE Y   +  LC  G+  +A  +L EM + G + DS TY +L+ GL
Sbjct: 728 SGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 165/335 (49%), Gaps = 8/335 (2%)

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
            A++ +   +IA    PN  ++N+L+   C +G   +A+     +   G  P+VV+YN L
Sbjct: 192 QASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTL 251

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           L++ C +G   EA  LLA M     +PT  TYN L+ + A  G    A  V++ M    F
Sbjct: 252 LKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGF 311

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-CKPNEGTYNGLAMLC-GVGKVQEAF 397
            P   +YN + A LC  GKVD   K  D+M H     P+  TYN L   C    +  +A 
Sbjct: 312 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDAL 371

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +++ + +K   S    +  V+  LCR+G+  +A   L  MT+ G  PD  TY++LI   
Sbjct: 372 NLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAY 431

Query: 458 CMEGLIEEALEIFVVMEEY---DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           C    + +A   FV+M+E      K D    N LL  LCK +R + + E+ +   ++G +
Sbjct: 432 CKARNVAKA---FVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFV 488

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           P+E +Y  ++     +++ E +  +  E+  R++ 
Sbjct: 489 PDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLT 523



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 161/353 (45%), Gaps = 5/353 (1%)

Query: 217 RGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRT--EEAIRFFRDLPSKGFEPNV 273
           R  H A +LL     +G  +P+L + N +L+ L +   T  + ++  FR L +    PN 
Sbjct: 151 RLPHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNH 210

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
            ++N+L+ + C +G   +A   L+ M G   SP +VTYN L+ +    G    A  +L  
Sbjct: 211 YTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLAR 270

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
           M K    P+ A+YN +++     G +      ++ M     +P+  TYN LA  LC  GK
Sbjct: 271 MKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 330

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK-GKTYQAFQLLYEMTKYGFTPDSYTYS 451
           V EAF +   + +    SP       +   C K  ++  A  LL EM   G      T++
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            +++GLC EG +EEAL    +M E    PDV  +N L+   CK+R    +  +   M+  
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           G   +  T   L+  +  +   E + E+L+    R  V +      VM   F+
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFK 503


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 247/495 (49%), Gaps = 5/495 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDA 133
           R  +L+  F  L  ++ KG + D +  T LL  LC   +   A+  V+  M   G IP+ 
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMED---YGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            SY  L+  LC +     A++L+  M D    G P + V+Y +++ G    G+ +++   
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ +G++P+  TY+ ++ A  K + +  AM++L+ ++  G  P+ ++YN +L G C 
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EAI F + + S G EP+VV+Y++L+  LC  GR  EA ++   M      P I T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+   A  G       +LD MV+    P    ++ +I     +GKVD  +    +M 
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +   PN  TY   + +LC  G+V++A    + + ++  S     Y  +I  LC   K  
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A +L+ EM   G   ++  ++S+I   C EG + E+ ++F +M     KP+V  +N L+
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            G C + + D ++++   M+  G  PN  TY+ L+ G      +E +  + KE++   V 
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578

Query: 550 SESAVERLVMQYDFE 564
            +     +++Q  F+
Sbjct: 579 PDIITYNIILQGLFQ 593



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 244/485 (50%), Gaps = 9/485 (1%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV---SSGIIP 131
           D + +DA  + L RM   G  P+V     LL  LC  N+ ++A++++ MM      G  P
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  SYT ++N   K+G+   A     +M D G   + VTYNS++  LC    ++++++ L
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           + +++ G++P+  TY+ +L           A+  L  + + G +P++V+Y++L+  LCK 
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR  EA + F  +  +G +P + +Y  LL+    +G   E + LL  M      P    +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           +ILI + A  GK D A+ V  +M +    P+A +Y  +I  LC  G+V+  +   +QM  
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
               P    YN L   LC   K + A  +I  + ++       F+  +I S C++G+  +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           + +L   M + G  P+  TY++LI G C+ G ++EA+++   M     KP+   ++ L+ 
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           G CK  R + +L +F+ M   G  P+  TY I+++G+             KEL +R   S
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR----TAAAKELYVRITES 610

Query: 551 ESAVE 555
            + +E
Sbjct: 611 GTQIE 615



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 229/461 (49%), Gaps = 1/461 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   ++ A   L  MV  G  PD +   ++L+  C + + K+AI  ++ M S G+ PD  
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVV 302

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++ LCK G    A ++ + M   G      TY +L++G    G L +    LD +
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ P+ + +S L+ A  K+  V  AM +   +  +G  PN V+Y  ++  LCK GR 
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+ +F  +  +G  P  + YN L+  LC   +WE A EL+ EM         + +N +
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I S    G+   + K+ + MV+   +P+  +YN +I   C  GK+D  +K L  M     
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPN  TY+ L    C + ++++A  + + + +   S     Y  ++  L +  +T  A +
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   +T+ G   +  TY+ ++ GLC   L ++AL++F  +   D K +   FN ++  L 
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           K  R D + ++F      G +PN  TY ++ E I  Q  LE
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 185/381 (48%), Gaps = 1/381 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A L   +M  +G  P+ V    ++  LCK+ +++ A+   E M+  G+ P   
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++ LC       A +L+ +M D G   NT+ +NS++   C  G + +S +  + +
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ PN  TY+ L+        +  AMKLL  +++ G KPN V+Y+ L+ G CK  R 
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+  F+++ S G  P++++YNI+L+ L    R   A EL   +        + TYNI+
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  +  TD AL++   +     +  A ++N +I  L   G+ D              
Sbjct: 623 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TY  +A  + G G ++E   +  S+ +   +       +++  L ++G+  +A  
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 742

Query: 434 LLYEMTKYGFTPDSYTYSSLI 454
            L  + +  F+ ++ T S  I
Sbjct: 743 YLSMIDEKHFSLEASTASLFI 763



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 161/388 (41%), Gaps = 75/388 (19%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM---------- 285
           P+L +Y +L+   C+ GR +       ++  KGF  + +++  LL+ LC           
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 286 --------------------------EGRWEEANELL---AEMDGGDRSPTIVTYNILIG 316
                                     E R +EA ELL   A+  GG   P +V+Y  +I 
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G +D A     EM+     P   +YN IIA LC    +D  ++ L+ M      P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TYN  L   C  G+ +EA   ++ + +         Y  ++  LC+ G+  +A ++ 
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 436 YEMTKYGFTPDSYTYSSLIRG--------------------------------LCM---E 460
             MTK G  P+  TY +L++G                                +C    +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G +++A+ +F  M +    P+   + A++  LCKS R + ++  F+ MI++G  P    Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQV 548
             L+ G+   ++ E + E++ E+  R +
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGI 472



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 13/281 (4%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL-----LAEMDGGDRSPTIV 309
           E+A   F +L  +G   ++   N   R+L    R   A  +     +A     + +P + 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLN---RALADVARDSPAAAVSRYNRMARAGADEVTPDLC 88

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQ 368
           TY ILIG     G+ D     L  ++K  FR  A ++ P++  LC++ +  D +   L +
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG-NKQNSSPQEFYKY--VITSLCR 424
           M    C PN  +YN L   LC   + QEA  ++  +  ++   SP +   Y  VI    +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +G + +A+   +EM   G  PD  TY+S+I  LC    +++A+E+   M +    PD   
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           +N++L G C S +   ++   + M   G  P+  TY++L++
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 1/288 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++ ++ ++    E MV  G KP+V+    L+   C A KM +A+K++  MVS G+ 
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L+N  CK   +  A+ L ++ME  G   + +TYN +++GL        + + 
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ + G      TY+ +L    K +    A+++  ++     K    ++N+++  L K
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR +EA   F    S G  PN  +Y ++  ++  +G  EE ++L   M+    +     
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 723

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
            N ++  L   G+   A   L  + +  F   A++ +  I  L S GK
Sbjct: 724 LNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI-DLLSGGK 770


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 246/514 (47%), Gaps = 19/514 (3%)

Query: 70  NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
           + + HRD+  +DA      MV  G  P+V     ++  +     ++K +  M  M   GI
Sbjct: 181 SSSNHRDY--DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGI 238

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  +Y  L++  CKK  V  AM L+  M   G   N ++YNS++ GLC  G +++  +
Sbjct: 239 SPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGE 298

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            ++ +  KGLVP+  TY+ L+    KE  +H  + LL +++ KG  PN+V+Y  L+  +C
Sbjct: 299 LVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMC 358

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G    A+  F  +  +G  PN  +Y  L+   C +G   EA ++L+EM     SP++V
Sbjct: 359 KAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVV 418

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TYN L+    + G+   A+ +L  MV+    P   SY+ +IA  C E ++    +  ++M
Sbjct: 419 TYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEM 478

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +   P+  TY+ L   LC   K+ EAF + + +  +     +  Y  +I + C  G+ 
Sbjct: 479 VEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGEL 538

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A +L  EM + GF PD+ TYS LI GL  +   + A  + + +   +  PD   +N L
Sbjct: 539 SKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTL 598

Query: 489 L---------------LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           +                G C     + +  VF+ M+++   PN   Y +++ G +    +
Sbjct: 599 IENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNV 658

Query: 534 ELSAEVLKELQLRQVVSES-AVERLVMQYDFEGI 566
             +  +  EL+       + AV  LV     EG+
Sbjct: 659 HKAYNLYMELEHSSFACHTVAVIALVKALAREGM 692



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 221/456 (48%), Gaps = 43/456 (9%)

Query: 131 PDASSYTY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV------------------- 169
           P +SS  +  +V  L + G V  A+ L+     +G+    +                   
Sbjct: 128 PFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRD 187

Query: 170 ---------------------TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
                                TYN ++RG+   G+L + L F+ ++ ++G+ PN  TY+ 
Sbjct: 188 YDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++A+ K++ V  AM LL  +   G   NL+SYN ++ GLC +GR  E      ++  KG
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+ V+YN L+   C EG   +   LL+EM G   SP +VTY  LI  +   G    A+
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           ++ D+M     RP+  +Y  +I   C +G ++   K L +M      P+  TYN L    
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C +G+VQEA  I++ +  +        Y  VI   CR+ +  +AFQ+  EM + G  PD+
Sbjct: 428 CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TYSSLI+GLC++  + EA ++F  M      PD   + +L+   C       +L +   
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDE 547

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M+++G +P+  TY++L+ G+  +   +++  +L +L
Sbjct: 548 MVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 246/500 (49%), Gaps = 26/500 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           + +M  +G  P+VV    L+   CK  K+K+A+ ++  M   G+  +  SY  ++N LC 
Sbjct: 230 MRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCG 289

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG +    +LVE+M   G   + VTYN+LV G C  GNL+Q L  L  ++ KGL PN  T
Sbjct: 290 KGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVT 349

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K   +  A+++ D +  +G +PN  +Y  L+ G C++G   EA +   ++ 
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             GF P+VV+YN L+   C  GR +EA  +L  M      P +V+Y+ +I       +  
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELG 469

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++ +EMV+    P   +Y+ +I  LC + K+        +M  R   P+E TY  L 
Sbjct: 470 KAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G++ +A  +   +  +        Y  +I  L +K +T  A +LL ++      
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589

Query: 445 PDSYTYSSLI---------------RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           PD  TY++LI               +G CM+GL+ EA  +F  M + ++KP+   +N ++
Sbjct: 590 PDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMI 649

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI-LVEGIAHQ---DEL-ELSAEVLKELQ 544
            G  +      +  ++ M +E       T   I LV+ +A +   DEL  L   +L+  +
Sbjct: 650 HGHSRGGNVHKAYNLY-MELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCR 708

Query: 545 LRQVVSESAVERLVMQYDFE 564
           L    +++ V +++++ +F+
Sbjct: 709 L----NDAKVAKVLVEVNFK 724



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 200/387 (51%), Gaps = 6/387 (1%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK-----ERGVH 220
           +++  ++ +V+ L  LG + ++L  L    + G  P   +Y+ +L+A  +      R   
Sbjct: 130 SSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYD 189

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A ++  D++  G  PN+ +YNV++ G+  +G  E+ + F R +  +G  PNVV+YN L+
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
            + C + + +EA  LL  M  G  +  +++YN +I  L   G+     ++++EM      
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI 399
           P   +YN ++   C EG +   +  L +M  +   PN  TY  L   +C  G +  A  I
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEI 369

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
              +  +     +  Y  +I   C+KG   +A+++L EM   GF+P   TY++L+ G C 
Sbjct: 370 FDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCF 429

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G ++EA+ I   M E    PDV +++ ++ G C+ R    + ++ + M+EKG +P+  T
Sbjct: 430 LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVT 489

Query: 520 YTILVEGIAHQDELELSAEVLKELQLR 546
           Y+ L++G+  Q +L  + ++ +E+  R
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRR 516



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 50/320 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A   L  MV +G  PDVV  + ++   C+  ++ KA ++ E MV  G++PD  +Y+
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYS 491

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC +  +  A  L  +M   G P + VTY SL+   C+ G L+++L+  D ++Q+
Sbjct: 492 SLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLL----------DDI------------------ 229
           G +P+  TYS L+    K+     A +LL          DD+                  
Sbjct: 552 GFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVE 611

Query: 230 ----------------------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
                                 + +  KPN   YN+++ G  + G   +A   + +L   
Sbjct: 612 GLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHS 671

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
            F  + V+   L+++L  EG  +E + LL  +    R        +L+      G  D  
Sbjct: 672 SFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAV 731

Query: 328 LKVLDEMVKGRFRPSAASYN 347
           L VL EM K    P    ++
Sbjct: 732 LNVLTEMAKDGLLPDGGIHS 751



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 134/321 (41%), Gaps = 48/321 (14%)

Query: 254 TEEAIRFFRDLP------SKGFEPNVVSYNIL-----LRSLCMEGRWEEANELLAEMDGG 302
            ++AI F +  P      S  F P   SY +L      R+L     W +A    A+    
Sbjct: 16  ADKAIAFLKRHPQRLASLSPHFTPQAASYVLLNSQSDQRTLLNFLTWAQAQ---AQAHNF 72

Query: 303 DRSP--TIVTYNILIG----SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
             +P    +  +IL+       A+    D A  + D      FR    +++   +   S 
Sbjct: 73  FFTPHCKCLALHILVRFKLYRTAHSLAADLAATLPDPTGASLFRHLHDTFHLCSSPFSSS 132

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-Y 415
              DLVVK L ++                     G V +A  ++  L N+   +P    Y
Sbjct: 133 AVFDLVVKSLSRL---------------------GFVPKALTLLH-LANRHGFAPTVLSY 170

Query: 416 KYVITSLCRKGKTYQ-----AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
             V+ +L R+  +       A ++  +M + G +P+ YTY+ +IRG+  +G +E+ L   
Sbjct: 171 NAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFM 230

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             ME+    P+V  +N L+   CK ++   ++ + + M   G   N  +Y  ++ G+  +
Sbjct: 231 RKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGK 290

Query: 531 DELELSAEVLKELQLRQVVSE 551
             +    E+++E++ + +V +
Sbjct: 291 GRMSEVGELVEEMRGKGLVPD 311


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 241/483 (49%), Gaps = 5/483 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   + +AF   E MV  G  PD      L+  LCK  ++K+A  +++ M  SG+ P+  
Sbjct: 292 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVV 351

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  LV+   K+G    A  ++ +M   G   N + Y++L+RGLC +G L ++ + L+ +
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ G  P+ FTY  L++  ++      A +LL+++   G  PN  +Y +++ GLC+ G +
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGES 471

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA     ++ S+G +PN   Y  L+     EG    A E L  M   +  P +  YN L
Sbjct: 472 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSL 531

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L+  G+ + A +   ++ K    P   +Y+ +I   C    ++   + L QM +   
Sbjct: 532 IKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGL 591

Query: 375 KPNEGTYNGLAMLCGVGKV---QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           KPN  TY  L  L G  K    ++  +I+QS+    +      Y  VI +L R      A
Sbjct: 592 KPNADTYTDL--LEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 649

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F +L E+ K G  PD + YSSLI GLC    +E+A+ +   M +   +P +  +NAL+ G
Sbjct: 650 FMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 709

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            C+S     +  VF  ++ KG +PN  TYT L++G     ++  + ++ K++  R +  +
Sbjct: 710 FCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPD 769

Query: 552 SAV 554
           + V
Sbjct: 770 AFV 772



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 229/484 (47%), Gaps = 5/484 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++  +  A   +  M   G  P       LL DL +A+ M+   K+   M  +GI 
Sbjct: 183 DTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIP 242

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+  +   CK  +   A ++ E+M       N VTYN ++ GLC  G + ++  F
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + ++  GL P+AFTY  L+    K   +  A  LLD++   G KPN+V Y  L+ G  K
Sbjct: 303 KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMK 362

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG+  EA     ++ S G +PN + Y+ L+R LC  G+   A++LL EM      P   T
Sbjct: 363 EGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ L+     H   D A ++L+EM      P+A +Y  +I  LC  G+       L++M 
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN--KQNSSPQEF-YKYVITSLCRKGK 427
               KPN   Y  L  + G  K        +SL N  K N  P  F Y  +I  L   G+
Sbjct: 483 SEGLKPNAFMYAPL--IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGR 540

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A +   ++ K G  PD +TYS LI G C    +E+A ++   M     KP+ D +  
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           LL G  KS   +    + Q M+  G  P+   Y I++  ++  + +E++  VL E++   
Sbjct: 601 LLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 660

Query: 548 VVSE 551
           +V +
Sbjct: 661 LVPD 664



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 233/528 (44%), Gaps = 40/528 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K  +AF  L  M+S G +P+ +   NL+  LCK  ++ +A K++  M+  G  
Sbjct: 358 DGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHR 417

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+    +  +   A +L+ +M + G   N  TY  ++ GLC  G   ++   
Sbjct: 418 PDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNL 477

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ +I +GL PNAF Y+ L+    KE  +  A + L+++      P+L  YN L+ GL  
Sbjct: 478 LEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLST 537

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----------- 299
            GR EEA  ++  +  +G  P+  +Y+ L+   C     E+A++LL +M           
Sbjct: 538 VGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADT 597

Query: 300 -------------------------DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
                                      GD+ P    Y I+I +L+     + A  VL E+
Sbjct: 598 YTDLLEGYFKSNDHEKVSSILQSMLGSGDK-PDNHIYGIVIRNLSRSENMEVAFMVLTEV 656

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKV 393
            K    P    Y+ +I+ LC    ++  V  LD+M     +P    YN L    C  G +
Sbjct: 657 EKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 716

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
             A  +  S+  K        Y  +I   C+ G    AF L  +M   G  PD++ Y+ L
Sbjct: 717 SRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVL 776

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
             G      +E+AL +   M    Y   V  F+ L+ G CK  R   + ++  +M+++  
Sbjct: 777 ATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREI 835

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +PN  T   ++       +L  +  V  ELQ ++  S+S+ +R  + +
Sbjct: 836 VPNAQTVENVITEFGKAGKLCEAHRVFAELQQKK-ASQSSTDRFSLLF 882



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 141/343 (41%), Gaps = 29/343 (8%)

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEA---IRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           IA    P+ +S + +   +C+   +      + FF     +   P+  ++  L  SLC  
Sbjct: 69  IAASDIPSRLSPDAVSCLICRRSHSLHPKLLLDFFYWSRPRIAPPSADAFARLAASLCAA 128

Query: 287 GRWEEANELLAEMDGGDRSPTIV-------------------------TYNILIGSLAYH 321
             + +AN LL +M      P +V                           ++L+ +   +
Sbjct: 129 SHFPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPSHSTAVLDVLVDTYKKN 188

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    A +V+  M      P+    N ++  L     ++LV K    M      P+  TY
Sbjct: 189 GSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTY 248

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           +  L   C       A  + + +  +  +  +  Y  +I+ LCR G   +AF    EM  
Sbjct: 249 STFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVD 308

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
           YG +PD++TY +L+ GLC  G ++EA  +   M     KP+V  +  L+ G  K  +   
Sbjct: 309 YGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAE 368

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + ++   MI  G  PN+  Y  L+ G+    +L  ++++L E+
Sbjct: 369 AFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411


>gi|147789723|emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
          Length = 550

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/417 (33%), Positives = 208/417 (49%), Gaps = 34/417 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL +A   ++ M  +   P      NL+  L K    ++A +V+++MV SG IPD  +Y 
Sbjct: 145 KLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITYN 204

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV  LCKKG +  A++L+++M   G P + +TYN+++R +   G  +Q++ F    ++K
Sbjct: 205 MLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRK 264

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G      TY+ L+E   K  G   AM++L+D+  +G  P++V+YN L+   CK+G+ E+ 
Sbjct: 265 GCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDT 324

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                +L S G  PN V+YN LL SLC  G W+E +E+L  M+   + PT+VTYNILI  
Sbjct: 325 ALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNMTSQPPTVVTYNILING 384

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +G  D A+   D+MV     P   +YN ++A LC EG VD  +  L  +   RC P 
Sbjct: 385 LCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPG 444

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN                                   VI  L +KG   +A  L  E
Sbjct: 445 LITYN----------------------------------IVIDGLAKKGCMEKAMGLYGE 470

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           M + GF PD  T+ +L  GL    L+E+AL I   M + + +     F    L  CK
Sbjct: 471 MIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRPDPLKHCK 527



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 186/386 (48%), Gaps = 2/386 (0%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T N +++ LC  G L  + + +D + ++  +P   +   L+    K      A ++L  +
Sbjct: 132 TNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIM 191

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +  GG P++++YN+L+ GLCK+G  + AI    ++   G  P+ ++YN +LR +   G +
Sbjct: 192 VMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGF 251

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           ++A     +         ++TY +LI  +  H  T  A++VL++M      P   +YN +
Sbjct: 252 DQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSL 311

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           +   C +GK +     +  +      PN  TYN L   LC  G   E   I+  +     
Sbjct: 312 VNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNMTSQ 371

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  +I  LC+ G   +A     +M  +   PD  TY++L+  LC EG+++EAL 
Sbjct: 372 PPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALH 431

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   + +    P +  +N ++ GL K    + ++ ++  MIE+G  P++ T+  L  G+ 
Sbjct: 432 LLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPDDITHRTLFWGLF 491

Query: 529 HQDELELSAEVLKELQLR-QVVSESA 553
             D +E +  +LKE+  R Q +  SA
Sbjct: 492 RLDLVEDALVILKEMNKRNQRIKNSA 517



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 1/336 (0%)

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A +L+D +  +   P   S   L+ GL K   TE A R  + +   G  P++++YN+L+ 
Sbjct: 149 ASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITYNMLVG 208

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC +G  + A ELL EM      P  +TYN ++  +  HG  D A+    + ++     
Sbjct: 209 GLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPA 268

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
              +Y  +I  +C        ++ L+ M    C P+  TYN L    C  GK ++   II
Sbjct: 269 YLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALII 328

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            +L +         Y  ++ SLC  G   +  ++L  M      P   TY+ LI GLC  
Sbjct: 329 YNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNMTSQPPTVVTYNILINGLCKY 388

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           GL++ A+  F  M  ++  PD+  +N LL  LCK    D +L +   + +    P   TY
Sbjct: 389 GLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITY 448

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
            I+++G+A +  +E +  +  E+  R    +    R
Sbjct: 449 NIVIDGLAKKGCMEKAMGLYGEMIERGFAPDDITHR 484



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 1/136 (0%)

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           +E    ++ +LC KGK   A +L+  M +    P   +  +LIRGL      E A  +  
Sbjct: 130 EETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLK 189

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           +M      PD+  +N L+ GLCK      ++E+   M   G  P+  TY  ++  +    
Sbjct: 190 IMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHG 249

Query: 532 ELELSAEVLKELQLRQ 547
             + +    K+ QLR+
Sbjct: 250 GFDQAIGFWKD-QLRK 264


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 230/469 (49%), Gaps = 13/469 (2%)

Query: 70  NDTRHRD--HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS 127
           ND  HR+      D  + L R       PD      L+   CKA ++ +A+ ++  M ++
Sbjct: 29  NDGCHREAYRVFKDELVTLFR-------PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAA 81

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           GI P   ++  L+  LC+      A+Q+  +M D     +   Y  ++  LC +  L+ +
Sbjct: 82  GITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLA 141

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
             + +R++Q G +P+  TY+ L+ + +K        ++ +++++KG  P LV+Y  ++ G
Sbjct: 142 ASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNG 201

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK GR ++A+   R L   G  P+   Y+ L+  LC   R +EA EL  EM  GD    
Sbjct: 202 YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAAGDVQDV 260

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           IV Y   I  L   GK D A  V  +M++    P   SYN II  LC + +V    + +D
Sbjct: 261 IV-YTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMD 319

Query: 368 QMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRK 425
           Q   R+C P       L   LC   +V+EA  I++ +    + +P    Y  VI  LC+ 
Sbjct: 320 QAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKA 379

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            +   A+ +L +M + G  PD  TY+++I   C  G ++EA E+F  M E     DV  +
Sbjct: 380 DRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAY 439

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           N L+ G C++ + D ++ + + M  +G  PN  + + +V+G+  +  +E
Sbjct: 440 NILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVE 488



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 200/428 (46%), Gaps = 8/428 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M + G  P +V   +L+  LC+ N   KA+++   M+   + PDA  YT ++  LCK
Sbjct: 75  LGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCK 134

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A    E+M   G   + VTY  LV  L       Q  Q  + ++ KG  P   T
Sbjct: 135 INKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVT 194

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++    K   +  A+ L+  +   G  P+   Y+ L+ GLCK  R +EA   F    
Sbjct: 195 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--M 252

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G   +V+ Y   +  LC  G+ +EA  +  +M     +P  V+YN++I SL    +  
Sbjct: 253 AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVS 312

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-PNEGTYNG- 383
            A +++D+ ++ +  P       ++  LC   +V+     L++M     + P+  TY+  
Sbjct: 313 EAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAV 372

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           +  LC   ++ +A+ ++Q +           Y  +I + C+ G+  +A +L   M + G 
Sbjct: 373 IDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGC 432

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D   Y+ LIRG C    ++EA+ +   M     +P+V + + ++ GLCK  R    +E
Sbjct: 433 ALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESR----VE 488

Query: 504 VFQMMIEK 511
             ++++EK
Sbjct: 489 EARLLMEK 496



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 178/373 (47%), Gaps = 5/373 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +KL+ A    ERMV  G  PD V  T L++ L KA K ++  ++ E M+S G  P+  +Y
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +VN  CK G +  A+ L+ +++  G   +   Y++L+ GLC     +++ +  +  + 
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MA 253

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G V +   Y+  +    K   +  A  +   +I  G  P+ VSYNV++  LCK+ R  E
Sbjct: 254 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILI 315
           A         +   P V    +L+  LC   R EEA  +L  M + GDR+P++VTY+ +I
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVI 373

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L    + D A  VL +M +    P   +Y  II   C  G++D   +   +M  R C 
Sbjct: 374 DGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 433

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            +   YN L    C   KV EA A+I+ +  +           ++  LC++ +  +A +L
Sbjct: 434 LDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEA-RL 492

Query: 435 LYEMTKYGFTPDS 447
           L E   +   PDS
Sbjct: 493 LMEKMNFESLPDS 505



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 151/316 (47%), Gaps = 3/316 (0%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G + N  + N LL     +G   EA R F+D     F P+  +Y  L+R  C   +  +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL EM     +PTIVT+  LI  L     TD AL++  +M+  + +P A  Y  +I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
           LC   K+DL     ++M    C P++ TY  L   L    K ++   I + + +K +S  
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  V+   C+ G+  QA  L+  +   G +P    YS+LI GLC     +EA E+F 
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF- 250

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M   D + DV  + + + GLCK+ + D +  V   MIE G  P+  +Y +++  +   +
Sbjct: 251 EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309

Query: 532 ELELSAEVLKELQLRQ 547
            +  + E++ +   R+
Sbjct: 310 RVSEAKELMDQAMERK 325



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 165/366 (45%), Gaps = 14/366 (3%)

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   N +T + LLE    +     A ++  D +    +P+  +Y  L+ G CK  +  +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++ + G  P +V++  L+R LC     ++A ++  +M      P    Y ++IG 
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K D A    + MV+    P   +Y  ++  L    K +   +  ++M  +   P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 378 EGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             TY    NG    C  G++ +A ++++ L     S     Y  +I  LC+  +  +A +
Sbjct: 192 LVTYATVVNG---YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE 248

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L+EM   G   D   Y+S I GLC  G ++EA  + V M E    PD  ++N ++  LC
Sbjct: 249 -LFEMAA-GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLC 306

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL-----QLRQV 548
           K  R   + E+    +E+  MP     T+LV+G+     +E +  +L+ +     +   V
Sbjct: 307 KDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSV 366

Query: 549 VSESAV 554
           V+ SAV
Sbjct: 367 VTYSAV 372


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 212/435 (48%), Gaps = 1/435 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     RM+     P  V  T LL  + K       + +   M S GI PD  +   
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    +GYA  ++ K+   G   +  T+N+L+RGLC+ G + ++L   D+ I +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY  L+    K     AA++LL  ++ K  +PN+++YN ++  LCK+ +  EA 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG  P++ +YN L+ +LC    W+    LL EM      P +V ++ ++ +L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A  V+D M+K    P   +Y  ++   C   ++D  VK  D M H+ C PN 
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +YN L    C + ++ +A  +++ +  +   +    Y  +I  LC  G+   A  L +E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TY  L+  LC    + EA+ +   +E  +   D+  +N  + G+C++  
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512

Query: 498 TDLSLEVFQMMIEKG 512
            + + ++F  +  +G
Sbjct: 513 LEAARDLFSNLSCQG 527



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 208/436 (47%), Gaps = 1/436 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  A+     M+     P    +T L+  + K  +    + L  +M+ +G P +  T 
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+   C L  L  +   L +L++ G  P+  T++ L+     E  +  A+ L D  I 
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G +P++V+Y  L+ GLCK G T  AIR  R +  K   PNV++YN ++ SLC + +  E
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  L +EM     SP I TYN LI +L    +  H   +L+EMV  +  P+   ++ ++ 
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC EG + +    +D M  R  +P+  TY  L    C   ++ EA  +  ++ +K    
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+  +  +A  LL +M+  G   D+ TY++LI GLC  G ++ A+ +F
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 450

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M      PD+  +  LL  LCK+     ++ + + +       +   Y I ++G+   
Sbjct: 451 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 510

Query: 531 DELELSAEVLKELQLR 546
            ELE + ++   L  +
Sbjct: 511 GELEAARDLFSNLSCQ 526



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 183/379 (48%), Gaps = 1/379 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ +L   +R++     P+   ++ LL +  K +     + L   + + G  P++ + N+
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C   R   A      L   G +P+  ++N L+R LC+EG+  EA  L  +  G  
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  L+  L   G T  A+++L  MV+   RP+  +YN II  LC + +V    
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
               +M  +   P+  TYN L   LC + + +    ++  + N +       +  V+ +L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++G    A  ++  M K G  PD  TY++L+ G C+   ++EA+++F  M      P+V
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            ++N L+ G C+ +R D ++ + + M  +G + +  TY  L+ G+ H   L+ +  +  E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 543 LQLRQVVSESAVERLVMQY 561
           +     + +    R+++ Y
Sbjct: 453 MVASGQIPDLVTYRILLDY 471



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 161/366 (43%), Gaps = 34/366 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    ++ + +G +PDVV    L+  LCK      AI+++  MV     P+  +Y 
Sbjct: 197 KIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYN 256

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A  L  +M   G   +  TYNSL+  LC L         L+ ++  
Sbjct: 257 TIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 316

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++PN   +S +++A  KE  +  A  ++D +I +G +P++V+Y  L+ G C     +EA
Sbjct: 317 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 376

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F  +  KG  PNV SYNIL+   C   R ++A  LL +M         VTYN LI  
Sbjct: 377 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 436

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L + G+  HA+ +  EMV     P   +Y  ++  LC                       
Sbjct: 437 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN--------------------- 475

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                          + EA  +++++      +    Y   I  +CR G+   A  L   
Sbjct: 476 -------------HHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 522

Query: 438 MTKYGF 443
           ++  GF
Sbjct: 523 LSCQGF 528



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 142/257 (55%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF     M++KG  PD+    +L++ LC   + K    ++  MV+S I+
Sbjct: 260 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 319

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   ++ +V+ LCK+G +  A  +V+ M   G   + VTY +L+ G C+   ++++++ 
Sbjct: 320 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 379

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG VPN  +Y+ L+    + + +  AM LL+ +  +G   + V+YN L+ GLC 
Sbjct: 380 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 439

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR + AI  F ++ + G  P++V+Y ILL  LC      EA  LL  ++G +    I+ 
Sbjct: 440 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 499

Query: 311 YNILIGSLAYHGKTDHA 327
           YNI I  +   G+ + A
Sbjct: 500 YNIAIDGMCRAGELEAA 516


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 238/448 (53%), Gaps = 8/448 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ K  +PD      LL  LC++N+++KA +++  M   G +PD + Y  L++   K  +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 149 VGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            G A + L E ++++  PT  VTY ++V GLC  G    +++ LD +  KG  PN +TY+
Sbjct: 61  FGQAFKFLAEMVKNHCLPT-VVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYN 119

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            ++E   +ER +  A K+L+++  +G  P++V+YN  + GLCK  R +EA +F   +P  
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP-- 177

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              P+VVSY  ++  LC  G  + A+ +L +M     +P +VTY+ LI      G+ + A
Sbjct: 178 -VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
           + +LD M+K   RP+  +YN ++  L   G +      L +M  R   P+  +YN  +  
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC   +V++A A+   +  +  +     Y  ++  LC+K +   A  L+ +  +     D
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFV-VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
              Y+ L+ GLC  G  +EA  +F  V++E   +PDV  +N +L   CK R+ D +L++ 
Sbjct: 357 ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIH 416

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDEL 533
           + M+E+    N  T+ ILV G+   D L
Sbjct: 417 KQMLER-NCCNVVTWNILVHGLCVDDRL 443



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 243/455 (53%), Gaps = 6/455 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L  MV     P VV  TN++  LCKA + K A+K+++ M   G  P+  +Y  +V 
Sbjct: 64  AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LC++  +  A +++E+M   GY  + VTYNS ++GLC    ++++ +FL R+    + P
Sbjct: 124 GLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTP 180

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  +Y+ ++    K   + +A ++LD +  +G  P++V+Y+ L+ G CK G  E A+   
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G  PN+V+YN LL +L   G   +A ++L EM+    +P +V+YN  I  L   
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            +   A  V D MV+    P+A+SY+ ++  LC + ++D  +  ++Q   +    +   Y
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLY 360

Query: 382 NGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMT 439
             L   LC  G+  EA A+   + +++   P  F Y  ++ S C++ +  +A Q+  +M 
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 420

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           +     +  T++ L+ GLC++  + +A  + + M +  + PD   +  L+  +CK  ++ 
Sbjct: 421 ERN-CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSA 479

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            +LE+F+  ++ G +P+  TY+ L+ G+ H++  E
Sbjct: 480 AALELFEEAVKGGCVPDVVTYSALITGLVHENMAE 514



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 238/456 (52%), Gaps = 19/456 (4%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + KL++A   LE M  +G+ PDVV   + +  LCK +++ +A K +  M    + PD  S
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVS 184

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT ++N LCK G++  A +++++M + G   + VTY+SL+ G C  G + +++  LD ++
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PN   Y+ LL A ++   +  A  +L ++  +G  P++VSYN  + GLCK  R +
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A   F  +  +G  PN  SY++L+  LC +   ++A  L+ +     +   I+ Y +L+
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364

Query: 316 GSLAYHGKTDHAL----KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             L   G+ D A     KVLDE +     P    YN ++   C   ++D  ++   QM  
Sbjct: 365 DGLCKGGRFDEACALFSKVLDEKI---CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 421

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R C  N  T+N L   LC   ++ +A  ++ ++ ++        Y  ++ ++C+ GK+  
Sbjct: 422 RNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAA 480

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L  E  K G  PD  TYS+LI GL  E + EEA  +F        K DV  +NA++L
Sbjct: 481 ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFT-------KLDVALWNAMIL 533

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           G  ++   DL L++F  +IE    PN  T+   + G
Sbjct: 534 GYAENGSGDLGLKLFVELIESDVEPNARTFGKEISG 569



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 207/428 (48%), Gaps = 32/428 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A   L++M ++G  PDVV  ++L+   CK  ++++A+ +++ M+  G  P+  +Y  
Sbjct: 198 LDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS 257

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L + G++G A  ++ +ME  G+  + V+YN+ + GLC    + ++    DR++++G
Sbjct: 258 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 317

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PNA +YS L+E   K++ +  A+ L++    K    +++ Y VLL GLCK GR +EA 
Sbjct: 318 CTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEAC 377

Query: 259 RFF-RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             F + L  K  EP+V  YN++L S C   + ++A ++  +M   +    +VT+NIL+  
Sbjct: 378 ALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN-CCNVVTWNILVHG 436

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    +   A  +L  MV   F P   +Y  ++  +C  GK    ++  ++     C P+
Sbjct: 437 LCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPD 496

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSL----------GNKQNSS---------------- 410
             TY+ L   L      +EA+ +   L          G  +N S                
Sbjct: 497 VVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDV 556

Query: 411 ---PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
               + F K +   L +     +A  L     K GF PD +  ++LI      G +EEA 
Sbjct: 557 EPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEAR 616

Query: 468 EIFVVMEE 475
            IF  M++
Sbjct: 617 RIFYSMKQ 624



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 407 QNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           ++  P  F +  ++  LCR  +  +A QLL  M + G  PD   Y++LI G        +
Sbjct: 4   KSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQ 63

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A +    M +    P V  +  ++ GLCK+ RT  ++++   M +KG  PN  TY ++VE
Sbjct: 64  AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123

Query: 526 GIAHQDELELSAEVLKELQLR 546
           G+  + +L+ + ++L+E+ +R
Sbjct: 124 GLCEERKLDEAKKMLEEMAVR 144



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 29/217 (13%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H   +  D  LQ+ + + + +  +VV    L++ LC  +++  A  ++  MV  G IPD 
Sbjct: 403 HCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 462

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL--------------- 178
            +Y  LV+ +CK G    A++L E+    G   + VTY++L+ GL               
Sbjct: 463 VTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 522

Query: 179 -------CML------GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA-YKERGVHAAMK 224
                   M+      G+ +  L+    LI+  + PNA T+   +     K   +  A  
Sbjct: 523 LDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARG 582

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           L D  +  G  P+L   N L+    K G  EEA R F
Sbjct: 583 LFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIF 619


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 233/451 (51%), Gaps = 3/451 (0%)

Query: 94  HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           H   +++   +L  L K       I + + M   GI  +  + + L+NC C  G + ++ 
Sbjct: 6   HTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSF 65

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            L+ K+   GY  NT+T+ +L++GLC+ G + + L F D+++ +    N  +Y  LL   
Sbjct: 66  SLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGL 125

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K      A+KLL  I  +  +PN+V Y+ ++ GLCK+    EA   + ++ ++   PNV
Sbjct: 126 CKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNV 185

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           ++YN L+ + C+ G+   A  LL EM   + +P + T++ILI +L   GK  +A ++   
Sbjct: 186 ITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHA 243

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           MV+    P+  SYN +I  LC   +VD  +  L +M H+   P+  TYN L   LC  G+
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +  A  ++  + ++   +    Y  ++ +LC+     +A  L  +M + G  P  YTY++
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI GLC  G ++ A E+F  +       DV  +  ++ GLCK    D +L +   M + G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +PN  T+ I++  +  +DE + + ++L E+
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 11/418 (2%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
            + L ++M+  G   N VT + L+   C LG +  S   L ++++ G  PN  T++ L++
Sbjct: 29  VISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMK 88

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
               +  V   +   D ++A+  + N VSY  LL GLCK G T  AI+  R +  +   P
Sbjct: 89  GLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRP 148

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           NVV Y+ ++  LC +    EA +L +EMD  +  P ++TYN LI +    G+   A  +L
Sbjct: 149 NVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLL 208

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK----PNEGTYNGLAM- 386
            EM+     P   +++ +I  LC EGK         Q+FH   +    PN  +YN +   
Sbjct: 209 HEMILKNINPDVYTFSILIDALCKEGKNA------KQIFHAMVQMGVNPNVYSYNIMING 262

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC   +V EA  +++ + +K        Y  +I  LC+ G+   A  L+ EM   G   D
Sbjct: 263 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 322

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+SL+  LC    +++A  +F+ M+E   +P +  + AL+ GLCK  R   + E+FQ
Sbjct: 323 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 382

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
            ++ KG   +  TYT+++ G+  +   + +  +  +++    +  +    ++++  FE
Sbjct: 383 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFE 440



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 208/427 (48%), Gaps = 3/427 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  KG + ++V  + L+   C   +M  +  ++  ++  G  P+  ++T L+  LC K
Sbjct: 34  KQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLK 93

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V   +   +K+    + TN V+Y +L+ GLC  G    +++ L  +  +   PN   Y
Sbjct: 94  GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           S +++   K++ V+ A  L  ++ A+   PN+++YN L+   C  G+   A     ++  
Sbjct: 154 SAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMIL 213

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           K   P+V +++IL+ +LC EG+   A ++   M     +P + +YNI+I  L    + D 
Sbjct: 214 KNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A+ +L EM+     P   +YN +I  LC  G++   +  +++M HR    +  TY  L  
Sbjct: 272 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC    + +A A+   +  +        Y  +I  LC+ G+   A +L   +   G   
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI 391

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D +TY+ +I GLC EG+ +EAL I   ME+    P+   F  ++  L +    D + ++ 
Sbjct: 392 DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLL 451

Query: 506 QMMIEKG 512
             MI KG
Sbjct: 452 HEMIAKG 458



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 137/258 (53%), Gaps = 2/258 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  AF  L  M+ K   PDV   + L+  LCK  K  K  ++   MV  G+ P+  SY 
Sbjct: 200 QLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAK--QIFHAMVQMGVNPNVYSYN 257

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N LCK   V  AM L+ +M       +TVTYNSL+ GLC  G +  +L  ++ +  +
Sbjct: 258 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 317

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +  TY+ LL+A  K + +  A  L   +  +G +P + +Y  L+ GLCK GR + A
Sbjct: 318 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 377

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F+ L  KG   +V +Y +++  LC EG ++EA  + ++M+     P  VT+ I+I S
Sbjct: 378 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437

Query: 318 LAYHGKTDHALKVLDEMV 335
           L    + D A K+L EM+
Sbjct: 438 LFEKDENDKAEKLLHEMI 455



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 148/302 (49%), Gaps = 2/302 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +N+A+     M ++   P+V+    L+   C A ++  A  ++  M+   I 
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNIN 217

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++ L++ LCK+G    A Q+   M   G   N  +YN ++ GLC    +++++  
Sbjct: 218 PDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 275

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++ K +VP+  TY+ L++   K   + +A+ L++++  +G   ++V+Y  LL  LCK
Sbjct: 276 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 335

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
               ++A   F  +  +G +P + +Y  L+  LC  GR + A EL   +        + T
Sbjct: 336 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWT 395

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ++I  L   G  D AL +  +M      P+A ++  II  L  + + D   K L +M 
Sbjct: 396 YTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMI 455

Query: 371 HR 372
            +
Sbjct: 456 AK 457



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 96/192 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A   L  M+ K   PD V   +L+  LCK+ ++  A+ +M  M   G   D  +YT
Sbjct: 268 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 327

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK  N+  A  L  KM++ G      TY +L+ GLC  G L  + +    L+ K
Sbjct: 328 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 387

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   + +TY+ ++    KE     A+ +   +   G  PN V++ +++  L ++   ++A
Sbjct: 388 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 447

Query: 258 IRFFRDLPSKGF 269
            +   ++ +KG 
Sbjct: 448 EKLLHEMIAKGL 459



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L+ A     +M  +G +P +   T L+  LCK  ++K A ++ + ++  G  
Sbjct: 331 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 390

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +YT +++ LCK+G    A+ +  KMED G   N VT+  ++R L      +++ + 
Sbjct: 391 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 450

Query: 191 LDRLIQKGLV 200
           L  +I KGL+
Sbjct: 451 LHEMIAKGLL 460


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 226/466 (48%), Gaps = 1/466 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA     RM+     P +V  + LL  + +       + + + M S GI  +  +   
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    +G+A  ++  +   GY  +T T+ +L+RGLC+ G + ++LQ  D++  +G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY  L+    K      A++ L  +  +  +P +V Y+ ++  LCK+ +  EA+
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F D+ +KG  PN  +Y+ L+  LC+ G W+EA  L   M      P  +T+N L+ +L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A  V+D M++   +P   +YN ++   C   ++   V   D M  + C P+ 
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +Y  L    C +  + +A  + + +  +        Y  +I  LC  G+   A  L +E
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M  YG  PD  TY  L   LC    + EA+ +  V+E  +  PD+  ++ ++ G+C++  
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + + ++F  +  KG  P+  TYTI++ G+  Q  L  ++++  E+
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 500



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 231/458 (50%), Gaps = 1/458 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+   C  N++  A  V+  ++  G  P  +++T L+  LC +G +G A+QL +KM   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           +  + +TY +L+ GLC +GN + +++FL  + Q+   P    YS ++++  K+R +  A+
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L  D++AKG  PN  +Y+ L+ GLC  G  +EAIR F  +  +   P+ +++N L+ +L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C EG   +A+ ++  M   D  P +VTYN L+       +    + V D MV+    PS 
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
            SY  +I   C    +D  +   ++M  +   P+  TYN L   LC VG++++A A+   
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +           Y+ +   LC+  +  +A  LL  +      PD + YS ++ G+C  G 
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +E A ++F  +      PDV  +  ++ GLC+      + ++F  M E G  PN  TY +
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL 514

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +  G    +E   + ++ +E+  R    + +   L+++
Sbjct: 515 ITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 223/463 (48%), Gaps = 2/463 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++L  AF  L  ++  G++P     T L+  LC   K+ +A+++ + M   G  PD  +Y
Sbjct: 103 NRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTY 162

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N LCK GN   A++ +  ME        V Y++++  LC    L ++L     ++ 
Sbjct: 163 GTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLA 222

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ PN FTYS L+           A++L   +I +   P+ +++N L+  LCKEG   +
Sbjct: 223 KGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVK 282

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      +     +P+VV+YN L+   C+     +   +   M      P++++Y  LI 
Sbjct: 283 AHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLIN 342

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                   D A+ + +EM +    P   +YN +I  LC  G++   +    +M      P
Sbjct: 343 GYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP 402

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY  L   LC   ++ EA  +++ +           Y  V+  +CR G+   A  L 
Sbjct: 403 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF 462

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +++  G  PD  TY+ +I GLC +GL+ EA ++F  M+E    P+   +N +  G  ++
Sbjct: 463 SKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRN 522

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
             T  ++++FQ M+ +G   + +T T+LVE ++  D L+ S +
Sbjct: 523 NETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLS-DDGLDQSVK 564



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 188/400 (47%), Gaps = 34/400 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D +L +A      M++KG  P+    ++L++ LC     K+AI++   M+   I+
Sbjct: 202 DSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 261

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  LV+ LCK+G V  A  +V+ M       + VTYNSL+ G C+   + +++  
Sbjct: 262 PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNV 321

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +++KG VP+  +Y+ L+    K + +  AM L +++  +G  P+ V+YN L+ GLC 
Sbjct: 322 FDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH 381

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  +AI  F ++   G  P++V+Y IL   LC   R  EA  LL  ++G +  P I  
Sbjct: 382 VGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHI 441

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+I++  +   G+ + A  +  ++      P   +Y  +I  LC +G +    K   +M 
Sbjct: 442 YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 501

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C PN  TYN                                   +     R  +T +
Sbjct: 502 ENGCSPNACTYN----------------------------------LITRGFLRNNETLR 527

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           A QL  EM   GF+ D  T + L+  L  +GL +   +I 
Sbjct: 528 AIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQIL 567



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 183/382 (47%), Gaps = 1/382 (0%)

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           +  ++ +L   +R+++    P+   +S LL +  + +     + L   + + G   N  +
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
            N+L+   C   R   A     D+   G++P+  ++  L+R LC+EG+  EA +L  +M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G    P ++TY  LI  L   G T  A++ L  M +   RP+   Y+ II  LC + ++ 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
             +     M  +   PN  TY+ L   LC +G  +EA  +  ++ +++    Q  +  ++
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
            +LC++G   +A  ++  M +    PD  TY+SL+ G C+   + + + +F  M      
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P V ++  L+ G CK +  D ++ +F+ M ++G +P+  TY  L+ G+ H   L  +  +
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391

Query: 540 LKELQLRQVVSESAVERLVMQY 561
             E+ +   + +    R++  Y
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDY 413



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 35/286 (12%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ M+    KPDVV   +L+   C  ++M K + V + MV  G +P   SYT L+N  CK
Sbjct: 287 VDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCK 346

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  AM L E+M   G   +TVTYN+L+ GLC +G L  ++     ++  G +P+  T
Sbjct: 347 IQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 406

Query: 206 YSFLLEAAYKERGVHAAMKLLDDI-----------------------------------I 230
           Y  L +   K   +  AM LL  I                                    
Sbjct: 407 YRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLS 466

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           +KG  P++ +Y +++ GLC++G   EA + F ++   G  PN  +YN++ R         
Sbjct: 467 SKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETL 526

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
            A +L  EM     S  + T  +L+  L+  G      ++L E V+
Sbjct: 527 RAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 237/461 (51%), Gaps = 1/461 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M   G KPD +    L+    +   +K +  V   ++  G  PDA ++T L+  LC K
Sbjct: 82  QQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLK 141

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V  A+   +K+   G+  + V+Y +L+ GLC +G    ++Q L R+  K + PN   Y
Sbjct: 142 GEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMY 201

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           S ++++  K++ V+ A  L  ++++K   P++V+Y+ L++G C  G+ + A+  F  + S
Sbjct: 202 STIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMIS 261

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               PNV +++IL+   C EG+  EA  +LA M   +    +VTYN L+       + + 
Sbjct: 262 DNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNK 321

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A  + + M +    P   SY+ +I   C    VD  +K  ++M  ++  PN  TYN L  
Sbjct: 322 AKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVD 381

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G+   A  ++  + ++   S    Y  ++ ++C+     +A  LL ++ + G  P
Sbjct: 382 GLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQP 441

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D +TY+ LI GLC  G +++A ++F  +    Y P++  + +L+ G C     D  L + 
Sbjct: 442 DIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAML 501

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             M + G +PN  TY IL+  +  +DE + + ++L+E+  R
Sbjct: 502 SKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIAR 542



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 169/311 (54%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  +NDAF     MVSK   PDVV  ++L+   C   K+K A+ +   M+S  I 
Sbjct: 206 DSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNIN 265

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +++ L++  CK+G V  A  ++  M       + VTYNSL+ G C++  +N++   
Sbjct: 266 PNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSL 325

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + + Q+G+ P+ ++YS ++    K + V  AMKL +++  K   PN+V+YN L+ GLCK
Sbjct: 326 FNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCK 385

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GRT  A+    ++  +G   N+++YN +L ++C     ++A  LL ++      P I T
Sbjct: 386 SGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFT 445

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y +LI  L   G+ D A KV ++++   + P+  +Y  +I   C++G  D  +  L +M 
Sbjct: 446 YTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505

Query: 371 HRRCKPNEGTY 381
              C PN  TY
Sbjct: 506 DNGCIPNAITY 516



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 144/261 (55%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +A   L  M+ K  K DVV   +L+   C   ++ KA  +  +M   G+ PD  
Sbjct: 280 KEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVW 339

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY+ ++N  CK   V  AM+L E+M       N VTYNSLV GLC  G  + +L+ +D +
Sbjct: 340 SYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEM 399

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G   N  TY+ +L+A  K   V  A+ LL  I  KG +P++ +Y VL+ GLCK GR 
Sbjct: 400 HDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRL 459

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A + F DL  KG+ PN+ +Y  L+   C +G ++E   +L++M      P  +TY IL
Sbjct: 460 DDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEIL 519

Query: 315 IGSLAYHGKTDHALKVLDEMV 335
           I SL    + D A K+L EM+
Sbjct: 520 IHSLFEKDENDKAEKLLREMI 540



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 177/359 (49%), Gaps = 1/359 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L R+  K  +P+VV  + ++  +CK   +  A  +   MVS  I PD  +Y+ L++  C 
Sbjct: 186 LRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCV 245

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G + YA+ L  +M       N  T++ L+ G C  G + ++   L  +++K +  +  T
Sbjct: 246 VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVT 305

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++     + V+ A  L + +  +G  P++ SY++++ G CK    +EA++ F ++ 
Sbjct: 306 YNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH 365

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            K   PNVV+YN L+  LC  GR   A EL+ EM    +   I+TYN ++ ++  +   D
Sbjct: 366 CKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVD 425

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+ +L ++ +   +P   +Y  +I  LC  G++D   K  + +  +   PN  TY  L 
Sbjct: 426 KAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C  G   E  A++  + +         Y+ +I SL  K +  +A +LL EM   G 
Sbjct: 486 NGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 35/227 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++N A      M  +G  PDV   + ++   CK   + +A+K+ E M    I P+  +Y 
Sbjct: 318 QVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYN 377

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS------------------------ 173
            LV+ LCK G    A++LV++M D G P+N +TYNS                        
Sbjct: 378 SLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEK 437

Query: 174 -----------LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                      L+ GLC +G L+ + +  + L+ KG  PN +TY+ L+     +      
Sbjct: 438 GIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEG 497

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           + +L  +   G  PN ++Y +L+  L ++   ++A +  R++ ++G 
Sbjct: 498 LAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 69/130 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +++ ++ A + L ++  KG +PD+   T L+  LCK  ++  A KV E ++  G  
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L+N  C KG     + ++ KM+D G   N +TY  L+  L      +++ + 
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKL 535

Query: 191 LDRLIQKGLV 200
           L  +I +GL+
Sbjct: 536 LREMIARGLL 545


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/450 (31%), Positives = 236/450 (52%), Gaps = 9/450 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P+ V    L+    K  +     +++E M + GI P+  SY  L+  LCK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 149 VGYAMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
              A +LV  M   G  +  + VTY++L+ G C  G + +S + L  +I +GL P+A  Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++ +  K   +  A++LL+++I  G  P L+++N L++G C+E   E A    + + +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G + +VV+YN L+  LC  GR +EA +LL  M     +P +V Y+  +  L   GK  +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-CKPNEGTYNGLA 385
           A +VL++M      P+  +YN I+  LC  GK+D  ++ ++QM     C  N   Y+ + 
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC +G+ QEA ++++++           Y  ++  LC+ GK  +A + + EM   G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 445 PDSYTYSSLIRGLCMEGLIEEA----LEIFVVMEEYDY-KPDVDNFNALLLGLCKSRRTD 499
           P++ TY SL+ GLC  G + EA     E+       D+  P V  +NAL+ GLCK+ R D
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
            +L+ FQ M  +G  P+  +Y+ +VEG+A 
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 221/422 (52%), Gaps = 9/422 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTYLVNCL 143
           LE M ++G +P+VV    LL  LCK  +  +A +++  M+S G    PD  +Y+ L++  
Sbjct: 33  LETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGY 92

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK G V  + +L++++   G   + + Y  ++  LC    L ++L+ L+ +I+ G  P  
Sbjct: 93  CKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTL 152

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            T++ L+    +E+ +  A  LL  + A G K ++V+YN L+ GLCK GR +EA +    
Sbjct: 153 ITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLER 212

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + + G  P+VV+Y+  +  LC  G+   A+++L +M   D  P +VTYN ++  L   GK
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK 272

Query: 324 TDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
            D AL+++++M        +   Y+ ++  LC  G+       ++ M    C+P+  TY+
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC  GK++EA   ++ +  +        Y  ++  LC  G+  +A +++ EM+  
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392

Query: 442 GFT-----PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           G       P   TY++LI GLC  G I++AL+ F  M      PD  +++ ++ GL +S 
Sbjct: 393 GGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452

Query: 497 RT 498
           R 
Sbjct: 453 RA 454



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 200/389 (51%), Gaps = 4/389 (1%)

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+  G P N+VT+N+LV G    G      + L+ +  +G+ PN  +Y+ LLE   K   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 219 VHAAMKLLDDIIAKGGK--PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
            H A +L+ D+I++GG+  P+LV+Y+ LL+G CK G+ EE+    +++ S+G  P+ + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
             ++ SLC   R  EA ELL EM      PT++T+N LI         + A  +L  M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQE 395
              +    +YN ++  LC  G++    + L++M    C P+   Y+     LC  GKV  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY-GFTPDSYTYSSLI 454
           A  +++ + +  +      Y  ++  LC+ GK   A +++ +M    G   +   YS+++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC  G  +EA  +   M     +PDV  +++L+ GLCK+ + + ++E  + M  +G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
           PN  TY  LV G+     L  +  +++E+
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 188/361 (52%), Gaps = 7/361 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ ++   L+ ++S+G +PD +  T ++  LCK+ ++ +A++++E M+ +G  P   ++ 
Sbjct: 97  KVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFN 156

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C++ N+  A  L++ M   G   + VTYN+L+ GLC  G L ++ Q L+R+   
Sbjct: 157 TLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+   YS  +    K   V  A ++L+ +      PN+V+YN +L GLCK G+ + A
Sbjct: 217 GCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTA 276

Query: 258 IRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           +     + S  G   NVV Y+ ++  LC  GR +EA  ++  M      P +VTY+ L+ 
Sbjct: 277 LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR---- 372
            L   GK + A++ + EM     +P+A +Y  ++  LCS G++    + +++M       
Sbjct: 337 GLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGG 396

Query: 373 -RCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             C P+  TYN L   LC  G++ +A    Q + ++        Y  ++  L R G+  Q
Sbjct: 397 DHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQ 456

Query: 431 A 431
           A
Sbjct: 457 A 457



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 160/293 (54%), Gaps = 8/293 (2%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R ++ ++ D+ LQ   M + G K DVV    L+  LCKA ++++A +++E M +SG  PD
Sbjct: 164 REKNLEMADSLLQT--MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +Y+  V  LCK G V  A Q++E+M D  +  N VTYN+++ GLC  G ++ +L+ ++
Sbjct: 222 VVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMME 281

Query: 193 RLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           ++    G   N   YS +++   K      A  +++ +   G +P++V+Y+ L+ GLCK 
Sbjct: 282 QMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKA 341

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS-----P 306
           G+ EEA+   R++  +G +PN V+Y  L+  LC  GR  EA  ++ EM  G        P
Sbjct: 342 GKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPP 401

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           ++ TYN LIG L   G+ D ALK    M      P   SY+ I+  L   G+ 
Sbjct: 402 SVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 184/354 (51%), Gaps = 4/354 (1%)

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PN+ T++ L+    K+       +LL+ + A+G +PN+VSYN LL GLCK  R  
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62

Query: 256 EAIRFFRDLPSKGFE--PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           EA    RD+ S+G    P++V+Y+ LL   C  G+ EE+ ELL E+      P  + Y  
Sbjct: 63  EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           ++ SL    +   AL++L+EM++    P+  ++N +I+  C E  +++    L  M    
Sbjct: 123 VMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASG 182

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            K +  TYN L   LC  G++QEA  +++ +     +     Y   +  LC+ GK   A 
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAH 242

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-YKPDVDNFNALLLG 491
           Q+L +M      P+  TY++++ GLC  G I+ ALE+   M   D    +V  ++ ++ G
Sbjct: 243 QVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           LCK  RT  +  V + M   G  P+  TY+ LV G+    ++E + E ++E+ +
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 121/249 (48%), Gaps = 3/249 (1%)

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           MD     P  VT+N L+   +  G+     ++L+ M     +P+  SYN ++  LC   +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 359 VDLVVKCLDQMFHR--RCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
                + +  M  R  R  P+  TY+ L +  C  GKV+E+  +++ + ++        Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             V+ SLC+  +  +A +LL EM + G  P   T+++LI G C E  +E A  +   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              K DV  +N L+ GLCK+ R   + ++ + M   G  P+   Y+  V G+    ++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 536 SAEVLKELQ 544
           + +VL++++
Sbjct: 241 AHQVLEQMR 249



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 9/192 (4%)

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  T+N L       G+  +   +++++  +        Y  ++  LC+  + ++A 
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 433 QLLYEMTKYG--FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           +L+ +M   G   TPD  TYS+L+ G C  G +EE+ E+   +     +PD   +  ++ 
Sbjct: 66  ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
            LCKS R   +LE+ + MI  G  P   T+  L+ G   +  LE++  +L      Q ++
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL------QTMA 179

Query: 551 ESAVERLVMQYD 562
            S V+  V+ Y+
Sbjct: 180 ASGVKADVVTYN 191


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 231/452 (51%), Gaps = 2/452 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA   L +M   G  PD V    LL   C+   + +A  ++  M   GI+P  ++Y  
Sbjct: 225 LADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNT 284

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV+   + G +  A  +VE M  +G+  +  TYN L  GLC  G ++++ +  D + Q G
Sbjct: 285 LVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLG 344

Query: 199 LV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           +V P+  TY+ L++A +K +    A+ LL+++  KG K +LV++N+++ GLC+EG+ EEA
Sbjct: 345 IVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEA 404

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     +  +G  P+V++YN L+ + C  G   +A  L+ EM          T N L+ +
Sbjct: 405 LGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 464

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + + A ++L    +  F P   SY  ++A    E K +  +   D+M  R+  P+
Sbjct: 465 LCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPS 524

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L   L  +GK+ EA   +  L           Y  +I + C++G   +AFQ   
Sbjct: 525 ISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHN 584

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M +  F PD  T ++L+ GLC+ G +E+A+++F    E   K DV  +N L+  LCK  
Sbjct: 585 KMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDN 644

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
             D +L  F  M  +G  P+  TY +L+  ++
Sbjct: 645 DVDTALRFFADMEVRGLQPDVFTYNVLLSALS 676



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 245/517 (47%), Gaps = 18/517 (3%)

Query: 32  LHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVS 91
           LHSF   +G +R   S Q   +   ++   P+  P  + D  H              +++
Sbjct: 159 LHSFR-RRGCVR--PSLQAANAVLSALARSPSTSPQASLDAFHS-------------LIA 202

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
               P+      L++  C    +  A+  +  M   G+ PDA +Y  L+N  C+KG +G 
Sbjct: 203 LRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGE 262

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A  L+ +M+  G      TYN+LV     LG + Q+   ++ +   G  P+ +TY+ L  
Sbjct: 263 ARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAA 322

Query: 212 AAYKERGVHAAMKLLDDIIAKG-GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
              +   V  A KL D++   G   P++V+YN L+    K  R+ +A+    ++  KG +
Sbjct: 323 GLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVK 382

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
            ++V++NI+++ LC EG+ EEA   L  M     +P ++TYN LI +    G    A  +
Sbjct: 383 SSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVL 442

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCG 389
           +DEMV+   +    + N ++  LC E + +   + L     R   P+E +Y   +A    
Sbjct: 443 MDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFK 502

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
             K + A  +   +  ++ +     Y  +I  L   GK  +A   L E+ + G  PD  T
Sbjct: 503 EYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTT 562

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y+ +I   C EG +E+A +    M E  +KPDV   N L+ GLC   R + ++++F+  +
Sbjct: 563 YNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWV 622

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           EKG+  +  TY  L++ +   ++++ +     ++++R
Sbjct: 623 EKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVR 659



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 231/480 (48%), Gaps = 38/480 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDASSYTYLVNCLC 144
           +E M + G +PD+     L   LC+A K+ +A K+ + M   GI+ PD  +Y  LV+   
Sbjct: 302 VEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACF 361

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K      A+ L+E+M + G  ++ VT+N +V+GLC  G L ++L  L+ + ++GL P+  
Sbjct: 362 KCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVI 421

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+ L++A+ K   V  A  L+D+++  G K +  + N LL  LCKE R EEA    R  
Sbjct: 422 TYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAP 481

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
           P +GF P+ VSY  ++ +   E + E A  L  EM     +P+I TYN LI  L+  GK 
Sbjct: 482 PQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKL 541

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A+  L+E+++    P   +YN II   C EG ++   +  ++M     KP+  T N L
Sbjct: 542 TEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTL 601

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC  G++++A  + +S   K        Y  +I +LC+      A +   +M   G 
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661

Query: 444 TPDSYTYSSLIRGLCMEGL-------------------------IEEALEIFVVMEEYDY 478
            PD +TY+ L+  L   G                          I+ ++E     ++ + 
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEV 721

Query: 479 KPDV-----------DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           K D+           +++N  +  LC   +   +  V   M++KG   + +TY  L+EG+
Sbjct: 722 KSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 199/416 (47%), Gaps = 39/416 (9%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA   LE M  KG K  +V    ++  LC+  ++++A+  +EMM   G+ PD  +Y  L
Sbjct: 367 SDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTL 426

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  CK GNV  A  L+++M   G   +T T N+L+  LC      ++ + L    Q+G 
Sbjct: 427 IDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGF 486

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           VP+  +Y  ++ A +KE     A+ L D++I +   P++ +YN L+ GL   G+  EAI 
Sbjct: 487 VPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAID 546

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              +L   G  P+  +YNI++ + C EG  E+A +   +M      P +VT N L+  L 
Sbjct: 547 KLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLC 606

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
            +G+ + A+K+ +  V+   +    +YN +I  LC +  VD  ++    M  R  +P+  
Sbjct: 607 LYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVF 666

Query: 380 TYNGL-----------------------AMLCG---------------VGKVQEAFAIIQ 401
           TYN L                         L G                GK  E  + I+
Sbjct: 667 TYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIE 726

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           S+GN Q    + + KY I  LC  G+  +A  +L EM + G + D+ TY +L+ GL
Sbjct: 727 SVGNTQGDDQESYNKY-IKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 188/395 (47%), Gaps = 35/395 (8%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  T+N LV   C  G L  +L  L ++   GL P+A TY+ LL A  ++  +  A  LL
Sbjct: 208 NHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLL 267

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             +  +G  P   +YN L++   + G  ++A      + + GFEP++ +YN+L   LC  
Sbjct: 268 ARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQA 327

Query: 287 GRWEEANELLAEMDG-GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           G+ +EA +L  EM+  G  SP +VTYN L+ +     ++  AL +L+EM +   + S  +
Sbjct: 328 GKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVT 387

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN 405
           +N I+  LC EG+++  +  L+ M      P+  T                         
Sbjct: 388 HNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVIT------------------------- 422

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                    Y  +I + C+ G   +AF L+ EM + G   D++T ++L+  LC E   EE
Sbjct: 423 ---------YNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 473

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A E+     +  + PD  ++  ++    K  + + +L ++  MI++   P+ +TY  L++
Sbjct: 474 AEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIK 533

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           G++   +L  + + L EL    +V +     +++ 
Sbjct: 534 GLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIH 568



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 167/371 (45%), Gaps = 9/371 (2%)

Query: 203 AFTYSFLLEAAY----KERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRT--E 255
           +F  S L +AA     + R  H A +LL     +G  +P+L + N +L+ L +   T  +
Sbjct: 132 SFPTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQ 191

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            ++  F  L +    PN  ++N+L+ + C +G   +A   L++M G   SP  VTYN L+
Sbjct: 192 ASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLL 251

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            +    G    A  +L  M K    P+ A+YN +++     G +      ++ M     +
Sbjct: 252 NAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFE 311

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK-GKTYQAFQ 433
           P+  TYN LA  LC  GKV EAF +   +      SP       +   C K  ++  A  
Sbjct: 312 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALN 371

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM + G      T++ +++GLC EG +EEAL    +M E    PDV  +N L+   C
Sbjct: 372 LLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASC 431

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K+     +  +   M+  G   +  T   L+  +  +   E + E+L+    R  V +  
Sbjct: 432 KAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEV 491

Query: 554 VERLVMQYDFE 564
               VM   F+
Sbjct: 492 SYGTVMAAYFK 502


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 241/470 (51%), Gaps = 14/470 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYD-----LCKANKMKKAIKVMEMMVSSGIIPDASS 135
           DA     RMV +    D V  T   +      LC+  +  +A+ ++  M   G +PDA  
Sbjct: 157 DALALYRRMVHR----DRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVL 212

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +++ LC +G V  A  L+ +M   G   +  T++ +VRG+C LG + ++ + +DR++
Sbjct: 213 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 272

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            KG +P   TY FLL+   + R    A  +L  +     + N+V +N ++ G   EG+  
Sbjct: 273 TKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLA 328

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA   +  +  KG +P+  +Y+IL+  LC  GR   A  LL EM+    +P +VTY I++
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 388

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            S   +G  D    +L+EM       ++  YN +I  LC +G++D  +  + +M  + C 
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  +YN +   LC   +++EA  + ++L  +   +    Y  +I +L R G+   A +L
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM  +G + D  +Y+ LI+ +C +G ++ +L +   M E   KP+  ++N L+  LCK
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 568

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            RR   +LE+ + M+ +G  P+  TY  L+ G+     +  +  +L++L 
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 618



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 197/420 (46%), Gaps = 65/420 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA-------------------------- 111
           ++ +A   ++RM++KG  P V+    LL  LC+                           
Sbjct: 260 RVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIG 319

Query: 112 -----NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT 166
                 K+ +A ++ E M   G  PDA +Y+ L++ LCK G +G A++L+ +ME  G+  
Sbjct: 320 GCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP 379

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N VTY  ++   C  G  + +   L+ +  KGL  N+  Y+ ++ A  K+  +  AM L+
Sbjct: 380 NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLI 439

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            ++ ++G  P++ SYN ++  LC   + EEA   F +L  +G   N ++YN ++ +L  +
Sbjct: 440 QEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRD 499

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GRW++A  L  EM     S  +V+YN LI ++   G  D +L +L+EM +   +P+  SY
Sbjct: 500 GRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSY 559

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
           N +I+ LC E +V   ++   QM ++   P+  TYN L                      
Sbjct: 560 NILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL---------------------- 597

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                       I  LC+ G  + A  LL ++      PD  TY+ LI   C   L+++A
Sbjct: 598 ------------INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 151/297 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  A   L  M  KG  P+VV  T +L+  CK         ++E M + G+  ++  Y 
Sbjct: 361 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK G +  AM L+++M   G   +  +YN+++  LC    + ++    + L+++
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+V N  TY+ ++ A  ++     A++L  ++I  G   ++VSYN L+  +CK+G  + +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++  KG +PN VSYNIL+  LC E R  +A EL  +M     +P IVTYN LI  
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           L   G    AL +L+++      P   +YN +I+  C    +D     L++     C
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 194/420 (46%), Gaps = 41/420 (9%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQ 186
           G+ P   SY  +++ L +      A+ L  +M      P  T T+    R LC LG  ++
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +L  L  + + G VP+A  Y  ++ A   + GV  A  LL++++  G   ++ +++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           G+C  GR  EA R    + +KG  P V++Y  LL+ LC   + +EA  +L       R P
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG------RVP 307

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            +   N+++                              +N +I    +EGK+    +  
Sbjct: 308 EL---NVVL------------------------------FNTVIGGCLAEGKLAEATELY 334

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           + M  + C+P+  TY+ L   LC +G++  A  +++ +  K  +     Y  V+ S C+ 
Sbjct: 335 ETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKN 394

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G       LL EM+  G T +S  Y+ +I  LC +G ++EA+ +   M      PD+ ++
Sbjct: 395 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSY 454

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           N ++  LC + + + +  +F+ ++E+G + N  TY  ++  +      + +  + KE+ L
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 124/210 (59%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D ++++A   ++ M S+G  PD+     ++Y LC   +M++A  + E ++  G++ +  
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ L + G    A++L ++M  +G   + V+YN L++ +C  GN+++SL  L+ +
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG+ PN  +Y+ L+    KER V  A++L   ++ +G  P++V+YN L+ GLCK G  
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
             A+     L ++   P++++YNIL+   C
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHC 637



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 170/369 (46%), Gaps = 7/369 (1%)

Query: 185 NQSLQFLDRLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYN 242
            ++L  LD+L ++ G+ P+  +Y+ +L    +      A+ L   ++ +    P   ++ 
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           V    LC+ GR +EA+   R +   G  P+ V Y  ++ +LC +G   EA  LL EM   
Sbjct: 180 VAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
             +  + T++ ++  +   G+   A +++D M+     P   +Y  ++  LC   + D  
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
                 M  R  + N   +N +   C   GK+ EA  + +++G K        Y  ++  
Sbjct: 300 ----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 355

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC+ G+   A +LL EM K GF P+  TY+ ++   C  G+ ++   +   M       +
Sbjct: 356 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              +N ++  LCK  R D ++ + Q M  +G  P+  +Y  ++  + + +++E +  + +
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475

Query: 542 ELQLRQVVS 550
            L    VV+
Sbjct: 476 NLLEEGVVA 484



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 7/300 (2%)

Query: 256 EAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIVTYNI 313
            A+     LP + G +P+  SYN++L  L       +A  L   M   DR  PT  T+ +
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
              +L   G+ D AL +L  M +    P A  Y  +I  LC +G V      L++M    
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C  +  T++ +   +CG+G+V+EA  ++  +  K        Y +++  LCR  +  +A 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            +L  + +         ++++I G   EG + EA E++  M     +PD   ++ L+ GL
Sbjct: 301 AMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           CK  R   ++ + + M +KG  PN  TYTI++         + +  +L+E+  + +   S
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 19/196 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +  DA    + M+  G   DVV    L+  +CK   + +++ ++E M   GI P+  
Sbjct: 498 RDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV 557

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++ LCK+  V  A++L ++M + G   + VTYN+L+ GLC +G ++ +L  L++L
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + + P+  TY+ L+         H  ++LLDD          +  N  +  +C  G  
Sbjct: 618 HNENVHPDIITYNILIS-------WHCKVRLLDDAA--------MLLNRAMAAVCPVGDR 662

Query: 255 EEAIRFFRDLPSKGFE 270
               R  + LP K F+
Sbjct: 663 ----RIMQILPDKNFK 674


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 226/466 (48%), Gaps = 1/466 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     R++     P +V    LL  + K       + +   M S G+ P+  +   
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    VG+A  ++ K+   G+  +  T+ +L+RGLC+ G + ++L   D++I +G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY  L+    K     AA++LL  +     +P++V Y  ++  LCK+ +  EA 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  +  +G  P++ +Y  L+ +LC    W+    LL +M      P +V ++ ++ +L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A +++D M++    P   +Y  ++   C + ++D  VK  D M  +   P+ 
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +Y  L    C + K+ +A  + + +  K+     + Y  ++  LC  G+   A  L +E
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TYS L+  LC    +EEA+ +   +E  +  PD+  +N ++ G+C++  
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + + ++F  +  KG  P+  TY I++ G+  +  L  + ++  E+
Sbjct: 466 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 228/466 (48%), Gaps = 1/466 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M S G  P+V     L+   C  N++  A  V+  ++  G  PD +++T L+  LC +G
Sbjct: 90  QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEG 149

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +G A+ L +KM D G+  N VTY +L+ GLC +GN + +++ L  + Q    P+   Y+
Sbjct: 150 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT 209

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            ++++  K+R V  A  L   ++ +G  P++ +Y  L+  LC     +        + + 
Sbjct: 210 SIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 269

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              P+VV ++ ++ +LC EG+  EA+E++  M      P +VTY  L+       + D A
Sbjct: 270 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 329

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
           +KV D MV+  F P   SY  +I   C   K+D  +   ++M  +   P+  TYN L   
Sbjct: 330 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYG 389

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC VG++Q+A A+   +  +        Y  ++ SLC+     +A  LL  +      PD
Sbjct: 390 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPD 449

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
              Y+ +I G+C  G +E A ++F  +      P V  +N ++ GLCK    + + ++F 
Sbjct: 450 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 509

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            M      P+  TY  +  G    +E   + ++L+E+  R   ++S
Sbjct: 510 EMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 222/437 (50%), Gaps = 1/437 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++  AF  L +++  GH+PD    T L+  LC   K+ +A+ + + M+  G  P+  +Y
Sbjct: 114 NRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTY 173

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N LCK GN   A++L+  ME      + V Y S++  LC    + ++     +++ 
Sbjct: 174 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG 233

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+ P+ FTY+ L+ A            LL+ ++     P++V ++ ++  LCKEG+  E
Sbjct: 234 QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 293

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      +  +G EP+VV+Y  L+   C++   +EA ++   M     +P +++Y  LI 
Sbjct: 294 AHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLIN 353

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 K D A+ + +EM +  + P   +YN ++  LC  G++   +    +M  R   P
Sbjct: 354 GYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMP 413

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY+ L   LC    ++EA A+++++     +   + Y  +I  +CR G+   A  L 
Sbjct: 414 DLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLF 473

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             ++  G  P  +TY+ +I GLC  GL+ EA ++F+ M+  D  PD   +N +  G  ++
Sbjct: 474 SNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQN 533

Query: 496 RRTDLSLEVFQMMIEKG 512
             T  ++++ + M+ +G
Sbjct: 534 NETLRAIQLLEEMLARG 550



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 191/377 (50%), Gaps = 34/377 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF    +MV +G  PD+   T+L++ LC   + K    ++  MV+S I+
Sbjct: 213 DSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKIL 272

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   ++ +V+ LCK+G V  A ++V+ M   G   + VTY +L+ G C+   ++++++ 
Sbjct: 273 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 332

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +++KG  P+  +Y+ L+    K   +  AM L +++  K   P+  +YN L+ GLC 
Sbjct: 333 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCH 392

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++AI  F ++ ++G  P++V+Y+ILL SLC     EEA  LL  ++  + +P I  
Sbjct: 393 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQV 452

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI+I  +   G+ + A  +   +      PS  +YN +I  LC  G ++   K   +M 
Sbjct: 453 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 512

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C P+  TYN +A                  G  QN+                 +T +
Sbjct: 513 GNDCSPDGCTYNTIAR-----------------GFLQNN-----------------ETLR 538

Query: 431 AFQLLYEMTKYGFTPDS 447
           A QLL EM   GF+ DS
Sbjct: 539 AIQLLEEMLARGFSADS 555



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 188/381 (49%), Gaps = 1/381 (0%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P + V +  L+  +  + + +  L    ++   G+ PN +T + L+ +      V  A  
Sbjct: 62  PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 121

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +L  I+  G +P+  ++  L+ GLC EG+  EA+  F  +  +GF+PNVV+Y  L+  LC
Sbjct: 122 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 181

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G    A  LL  M+ G+  P +V Y  +I SL    +   A  +  +MV     P   
Sbjct: 182 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 241

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL 403
           +Y  ++  LC+  +   V   L+QM + +  P+   ++ +   LC  GKV EA  I+  +
Sbjct: 242 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 301

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
             +        Y  ++   C + +  +A ++   M + GF PD  +Y++LI G C    I
Sbjct: 302 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 361

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           ++A+ +F  M   ++ PD   +N L+ GLC   R   ++ +F  M+ +GQMP+  TY+IL
Sbjct: 362 DKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSIL 421

Query: 524 VEGIAHQDELELSAEVLKELQ 544
           ++ +     LE +  +LK ++
Sbjct: 422 LDSLCKNRHLEEAMALLKAIE 442


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 242/516 (46%), Gaps = 61/516 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L+ M S+   P       ++   C++     A++V+E + + G   D  +  
Sbjct: 131 RIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCN 190

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N +C +G V   ++++ K+  +G   + V+YN++++GLC         + +D +++ 
Sbjct: 191 LVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVK- 249

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
                                VH A   L  +   G  P++  Y  ++ G+CKEG  E A
Sbjct: 250 ---------------------VHEA---LSQMAQHGCTPDIRMYATIIDGICKEGHHEVA 285

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +PS G +PNVV YN +L+ +C   RWE+A ELL EM   +     VT+NIL+  
Sbjct: 286 NEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDF 345

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D  +++L++M++    P   +Y  +I   C EG +D  V  L  M    CKPN
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405

Query: 378 EGTYN----GLA--------------------------------MLCGVGKVQEAFAIIQ 401
             +Y     GL                                  LC  G V++A  +++
Sbjct: 406 TISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLK 465

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +     +     Y  VI  L + GKT +A +LL  M   G TP+  TYSS+   L  EG
Sbjct: 466 QMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREG 525

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I++ +++F  +++   + D   +NA++  LCK R TDL+++    M+  G MPNE+TYT
Sbjct: 526 RIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYT 585

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
            L++G+A +  L  + ++L EL  R+ V +    R 
Sbjct: 586 ALIKGLASEGLLCEAQDLLSELCSRRAVRKHLTRRF 621



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 147/336 (43%), Gaps = 20/336 (5%)

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           +  A  +  D    GG   L   + L+  LC  GRT +A+R    L + G    VV YN 
Sbjct: 36  ISTAATVSADTAVGGGSGRL---SALIRSLCVAGRTADAVRA---LDAAGNAAGVVDYNA 89

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++   C  G+ E A  L A +      P   TY  ++  L   G+   AL VLDEM    
Sbjct: 90  MVAGYCRVGQVEAARRLAAAV---PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRS 146

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAF 397
             P    Y+ II   C  G     ++ L+ +  +    + G  N  +  +C  G V E  
Sbjct: 147 CVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGL 206

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK----------YGFTPDS 447
            +++ L      +    Y  V+  LC   +     +L+ EM K          +G TPD 
Sbjct: 207 EMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDI 266

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             Y+++I G+C EG  E A EI   M  Y  KP+V  +N +L G+C + R + + E+   
Sbjct: 267 RMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTE 326

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M +K    ++ T+ ILV+       ++   E+L+++
Sbjct: 327 MYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 362


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 229/457 (50%), Gaps = 7/457 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  L+ AF   +RMV +G  P+ V  + L+  LC   ++ +A+ ++E M+  GI P   
Sbjct: 287 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 346

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  +  LC   +   A++LV +M+  G   N  TY +L+ GL  LG L  ++    ++
Sbjct: 347 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 406

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++GLVPN  TY+ L+           A+K+   +   G   N  +YN ++ GLC  G  
Sbjct: 407 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 466

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+  F  +   G  P VV+YN L+     +G    A  LL  M      P   TYN L
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 526

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  GK + A     EMV+    P+  SY  +I     +GKVD+ +  L++M    C
Sbjct: 527 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGC 586

Query: 375 KPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
            PN  +YN  A++ G+ K     EA  I   +  +Q   P    Y  +I  LCR G+T  
Sbjct: 587 NPNVESYN--AVINGLSKENRFSEAEKICDKMA-EQGLLPNVITYTTLIDGLCRNGRTQF 643

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF++ ++M K    P+ YTYSSLI GLC EG  +EA  +   ME     PD   F +L+ 
Sbjct: 644 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 703

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           G     R D +  + + M++ G  PN  TY++L++G+
Sbjct: 704 GFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL 740



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 237/488 (48%), Gaps = 25/488 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + + A      M   G   +      ++  LC    ++KA+ + E M+  G +P   +Y 
Sbjct: 430 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 489

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N    KGNV  A +L++ M++ G   +  TYN LV G    G L  +  +   +++ 
Sbjct: 490 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 549

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN  +Y+ L++   K+  V  A+ LL+ +   G  PN+ SYN ++ GL KE R  EA
Sbjct: 550 GLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEA 609

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +    +  +G  PNV++Y  L+  LC  GR + A ++  +M+     P + TY+ LI  
Sbjct: 610 EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 669

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   GK D A  +L EM +    P   ++  +I      G++D     L +M    CKPN
Sbjct: 670 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPN 729

Query: 378 EGTYN----GLAMLC-----GVGKVQEA------------FAIIQSLGNKQNSSPQE--- 413
             TY+    GL   C      V    EA            F I+ +L  + +    E   
Sbjct: 730 YRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTL 789

Query: 414 -FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  +++ LCRKG+ Y+A QL+ +M + GF PD   Y SL+   C    ++ AL+IF  
Sbjct: 790 DTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHS 849

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           +E   ++  +  + AL+  LCK+ + + +  +F  M+EK    +E  +T+LV+G+  + E
Sbjct: 850 IEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGE 909

Query: 533 LELSAEVL 540
           L+L  ++L
Sbjct: 910 LDLCMKLL 917



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 244/460 (53%), Gaps = 3/460 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M++ G +P ++    L+  L K  K+++A  ++  +    + PD  +YT L+   C+ 
Sbjct: 229 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 288

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            N+  A  + ++M   G   N+VTY++L+ GLC  G ++++L  L+ +I+KG+ P  +TY
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 348

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  + A         A++L+  +  +G +PN+ +Y  L++GL + G+ E AI  +  +  
Sbjct: 349 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 408

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  PN V+YN L+  LC+ GR+  A ++   M+G        TYN +I  L   G  + 
Sbjct: 409 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 468

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-A 385
           A+ + ++M+K    P+  +YN +I    ++G V+   + LD M    C+P+E TYN L +
Sbjct: 469 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 528

Query: 386 MLCGVGKVQEA-FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                GK++ A F   + +    N +P   Y  +I    + GK   A  LL  M + G  
Sbjct: 529 GFSKWGKLESASFYFQEMVECGLNPNPVS-YTTLIDGHSKDGKVDIALSLLERMEEMGCN 587

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  +Y+++I GL  E    EA +I   M E    P+V  +  L+ GLC++ RT  + ++
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F  M ++  +PN  TY+ L+ G+  + + + +  +LKE++
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEME 687



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 234/473 (49%), Gaps = 27/473 (5%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM  +G +P+V   T L+  L +  K++ AI +   M+  G++P+  +Y  L+N LC  G
Sbjct: 370 RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 429

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
               A+++   ME +G   NT TYN +++GLC+ G++ +++   +++++ G +P   TY+
Sbjct: 430 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 489

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+     +  V+ A +LLD +   G +P+  +YN L++G  K G+ E A  +F+++   
Sbjct: 490 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 549

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  PN VSY  L+     +G+ + A  LL  M+    +P + +YN +I  L+   +   A
Sbjct: 550 GLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEA 609

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            K+ D+M +    P+  +Y  +I  LC  G+     K    M  R+C PN  TY+ L   
Sbjct: 610 EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 669

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  GK  EA  +++ +  K  +  +  +  +I      G+   AF LL  M   G  P+
Sbjct: 670 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPN 729

Query: 447 SYTYSSLIRGLCMEG-LIEEALEI-----------------------FVVMEEYDYKPDV 482
             TYS L++GL  E  L+EE + +                          M E   +P +
Sbjct: 730 YRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTL 789

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
           D ++ L+ GLC+  R   + ++ + M E+G  P+   Y  L+  IAH   LE+
Sbjct: 790 DTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL--IAHCKNLEV 840



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 183 NLNQSLQFLDRLIQ-KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           N+N  +  L+RL++ +   P       +++A   E  +      L++I   G   +L S 
Sbjct: 149 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSC 208

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           N LL  L K    E A   ++ + + G +P+++++N L+  L  +G+  EA  +L+++  
Sbjct: 209 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 268

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
            D SP + TY  LI     +   D A  V D MVK    P++ +Y+ +I  LC+EG+VD 
Sbjct: 269 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 328

Query: 362 VVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +  L++M  +  +P   TY   +  LC +   +EA  ++  +  +      + Y  +I+
Sbjct: 329 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 388

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L R GK   A  L ++M K G  P++ TY++LI  LC+ G    AL+IF  ME +    
Sbjct: 389 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 448

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +   +N ++ GLC     + ++ +F+ M++ G +P   TY  L+ G   +  +  +A +L
Sbjct: 449 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 508



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 183/388 (47%), Gaps = 12/388 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D K++ A   LERM   G  P+V     ++  L K N+  +A K+ + M   G++
Sbjct: 563 DGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLL 622

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++ LC+ G   +A ++   ME      N  TY+SL+ GLC  G  +++   
Sbjct: 623 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEIL 682

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + +KGL P+  T++ L++       +  A  LL  ++  G KPN  +Y+VLL GL K
Sbjct: 683 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQK 742

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           E    E     +      F P+    N           +E  + LLA M      PT+ T
Sbjct: 743 ECLLLEEKVAVQHEAVYSFSPHEKDVN-----------FEIVSNLLARMSEIGCEPTLDT 791

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ L+  L   G+   A +++ +M +  F P    Y  ++   C   +VD  +K    + 
Sbjct: 792 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE 851

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +  + +   Y  L   LC  G+V+EA A+  ++  K+ ++ +  +  ++  L ++G+  
Sbjct: 852 AKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELD 911

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
              +LL+ M    FTP+  TY  L R L
Sbjct: 912 LCMKLLHIMESKNFTPNIQTYVILGREL 939



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 24/284 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K ++A + L+ M  KG  PD V  T+L+       ++  A  ++  MV  G  P+  
Sbjct: 672 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYR 731

Query: 135 SYTYLVN-----CLC-------------------KKGNVGYAMQLVEKMEDYGYPTNTVT 170
           +Y+ L+      CL                    K  N      L+ +M + G      T
Sbjct: 732 TYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDT 791

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           Y++LV GLC  G   ++ Q +  + ++G  P+   Y  LL A  K   V  A+K+   I 
Sbjct: 792 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE 851

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           AKG + +L  Y  L+  LCK G+ EEA   F ++  K +  + + + +L+  L  EG  +
Sbjct: 852 AKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELD 911

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
              +LL  M+  + +P I TY IL   L+  GK+  +  + D++
Sbjct: 912 LCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 229/455 (50%), Gaps = 3/455 (0%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DAF   + M  KG  P +     +L    K N+ +    +   M    I     ++  +
Sbjct: 183 DDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIM 242

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N LCK+G +  A   +  ME+ G   N VTYN+++ G C  G +  +   LD +  +G+
Sbjct: 243 INVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGV 302

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+++TY  L+    K   +  A  +L+ +   G  P  V+YN L+ G C +G   +A  
Sbjct: 303 EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFG 362

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
           +  ++  +   P V +YN+L+ +L +EG+ +EA+ ++ +M      P  +TYNILI    
Sbjct: 363 YRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYC 422

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G    A  + DEM+    +P+  +Y  +I  L    ++       +++      P+  
Sbjct: 423 RCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLI 482

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
            +N L    C  G +  AFA+++ + +K+N  P E  Y  ++   CR+GK  +A +LL E
Sbjct: 483 MFNALIDGHCANGNLDRAFALLKEM-DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKE 541

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + G  PD  +Y++LI G    G I +A  I   M    + P +  +NAL+ GLCK+++
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQ 601

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
            DL+ E+ + M+ KG  P+++TY  L+EGI   D+
Sbjct: 602 GDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDD 636



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 203/384 (52%), Gaps = 1/384 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL  A   +  M + G KP+VV    +++  C   +++ A  V+++M + G+ PD+ 
Sbjct: 248 KEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSY 307

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ +CK G +  A  ++EKM++ G     VTYN+L+ G C  G+L ++  + D +
Sbjct: 308 TYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEM 367

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++ ++P   TY+ L+ A + E  +  A  ++ D+   G  P+ ++YN+L+ G C+ G  
Sbjct: 368 VRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNA 427

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A     ++ SKG +P +V+Y  L+  L    R + A++L  ++     SP ++ +N L
Sbjct: 428 KKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNAL 487

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     +G  D A  +L EM K    P   +YN ++   C EGKV+   + L +M  R  
Sbjct: 488 IDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGI 547

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+  +YN L +     G + +AF I   + +   +     Y  +I  LC+  +   A +
Sbjct: 548 RPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEE 607

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGL 457
           LL EM   G TPD  TY SLI G+
Sbjct: 608 LLKEMVSKGITPDDSTYFSLIEGI 631



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 163/319 (51%), Gaps = 2/319 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL +A   LE+M   G  P  V    L+   C    + KA    + MV   I+P  S+Y 
Sbjct: 321 KLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYN 380

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L  +G +  A  +++ M D G   +++TYN L+ G C  GN  ++    D +I K
Sbjct: 381 LLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISK 440

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P   TY+ L+    K   + AA  L + II +G  P+L+ +N L+ G C  G  + A
Sbjct: 441 GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRA 500

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               +++  +   P+ V+YN L++  C EG+ EEA ELL EM      P  ++YN LI  
Sbjct: 501 FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +  G  + A  + DEM+   F P+  +YN +I  LC   + DL  + L +M  +   P+
Sbjct: 561 YSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPD 620

Query: 378 EGTYNGLAMLCGVGKVQEA 396
           + TY   +++ G+GKV ++
Sbjct: 621 DSTY--FSLIEGIGKVDDS 637



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 189/383 (49%), Gaps = 1/383 (0%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +++ ++ L+R  C L   + + +  D + +KG+VP   T++ +L    K         L 
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            ++     K  + ++N+++  LCKEG+ ++A  F   + + G +PNVV+YN ++   C  
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GR E A  +L  M      P   TY  LI  +   GK + A  +L++M +    P+A +Y
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
           N +I   C++G +       D+M  R   P   TYN L   L   GK+ EA  +I+ +G+
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                    Y  +I   CR G   +AF L  EM   G  P   TY+SLI  L     ++ 
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A ++F  +      PD+  FNAL+ G C +   D +  + + M ++  +P+E TY  L++
Sbjct: 465 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQ 524

Query: 526 GIAHQDELELSAEVLKELQLRQV 548
           G   + ++E + E+LKE++ R +
Sbjct: 525 GRCREGKVEEARELLKEMKRRGI 547



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 151/327 (46%), Gaps = 6/327 (1%)

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
           G  + + +++L+   C+  R ++A   F  +  KG  P + ++N +L       + E   
Sbjct: 162 GTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVW 221

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L AEM       T+ T+NI+I  L   GK   A   +  M     +P+  +YN +I   
Sbjct: 222 VLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGY 281

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           CS G+V+     LD M +R  +P+  TY  L + +C  GK++EA  I++ +         
Sbjct: 282 CSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTA 341

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  +I   C KG   +AF    EM +    P   TY+ LI  L +EG ++EA  +   
Sbjct: 342 VTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKD 401

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M +    PD   +N L+ G C+      +  +   MI KG  P   TYT L+  ++ ++ 
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNR 461

Query: 533 LELSAEVLKELQLRQVVSESAVERLVM 559
           ++ + ++ +     +++ E A   L+M
Sbjct: 462 MKAADDLFE-----KIIREGASPDLIM 483



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 97/185 (52%), Gaps = 3/185 (1%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R+R    +D F   E+++ +G  PD++    L+   C    + +A  +++ M    I+PD
Sbjct: 459 RNRMKAADDLF---EKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPD 515

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +Y  L+   C++G V  A +L+++M+  G   + ++YN+L+ G    G++N +    D
Sbjct: 516 EVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRD 575

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            ++  G  P   TY+ L++   K +    A +LL ++++KG  P+  +Y  L+ G+ K  
Sbjct: 576 EMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVD 635

Query: 253 RTEEA 257
            + EA
Sbjct: 636 DSSEA 640



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 112/289 (38%), Gaps = 42/289 (14%)

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P V+++  LL S+    +W     L   +     SP++++  +L    + H K+D AL+ 
Sbjct: 53  PLVITHQSLLDSI-QSSQWHLIKHLAPNL-----SPSLISATLL----SLHKKSDLALQF 102

Query: 331 LDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL----- 384
           +  +  KG                     +D+  KCL      R    + T + L     
Sbjct: 103 VTHIGFKG---------------------LDIKTKCLAVAVVSRSPSPKSTLHLLKQTIE 141

Query: 385 AMLCGVGKVQEAFAIIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           + + GV  V    AI +  LG K +      +  +I + C   +   AF+    M + G 
Sbjct: 142 SRVAGVKDVFHELAITRDRLGTKSSI----VFDMLIRACCELKRGDDAFECFDMMKEKGV 197

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P   T+++++         E    ++  M     K  V  FN ++  LCK  +   + +
Sbjct: 198 VPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKD 257

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
               M   G  PN  TY  ++ G   +  +E +  VL  ++ R V  +S
Sbjct: 258 FIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDS 306


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 234/466 (50%), Gaps = 1/466 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
            RM+S+G +P+++    ++  LCK   +  A  +M+ +  S + PD  +YT ++   C+K
Sbjct: 374 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 433

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            ++  A+Q+  +M   G   NTVTY++L+ GLC  G +N++   +  +I  G++P A T 
Sbjct: 434 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 493

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  + A         A +L  D+  KG +PN+ +Y  L++GLC  G  + AI  F  +  
Sbjct: 494 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 553

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  PN V+YN L+  L    R + A  +L  M        IVTYN +I      G    
Sbjct: 554 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKK 613

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+ V++ M++     +  +YN II   C  G     ++ LD M    CKP+E +Y  L  
Sbjct: 614 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 673

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C + K++ AF +   + +      +  Y  +I   C+  K   A  LL  M + G  P
Sbjct: 674 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 733

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TY+ LI GL  +     A E+  VM E    P+V  + A++ GLCK+  T L+LE+F
Sbjct: 734 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 793

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             MIE+G +PN  TY+ L+  +  + ++E +  +  EL+   ++ +
Sbjct: 794 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 839



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 222/460 (48%), Gaps = 7/460 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H L+ A     +M  +G +P+ V  + L+  LC + ++ +A  ++  M+  GI+P A 
Sbjct: 432 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 491

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + T  +  LC  G    A +L   M++ G   N  TY +L+ GLC+ G L  ++    R+
Sbjct: 492 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+ PN  TY+ L+    + R +  A  +L+ +   G   N+V+YN ++ G C  G  
Sbjct: 552 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDP 611

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+    ++  +G   N+V+YN +++  C  G    A  +L  M  G   P   +Y  L
Sbjct: 612 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       K + A  + +EMV     P+  +Y  +I   C + K+D     L+ M    C
Sbjct: 672 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN---KQNSSPQEF-YKYVITSLCRKGKTYQ 430
           +PN  TYN   ++ G+ K Q  F+  + L     ++   P    Y  +I  LC+ G T  
Sbjct: 732 RPNVQTYN--VLIHGLTK-QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 788

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A ++  +M + G  P+  TYSSLIR L  EG +EEA  +F  +E +   PD   +  ++ 
Sbjct: 789 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIE 848

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
               S + + +      MI+ G  P   TY +L++G+ ++
Sbjct: 849 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 888



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 225/490 (45%), Gaps = 27/490 (5%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA+     M +KG +P+V   T L+  LC +  +K AI +   M   G+ P+  +Y  L+
Sbjct: 508 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 567

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N L +   + YA  ++  M   G  TN VTYN +++G C+LG+  +++  ++ ++Q+G  
Sbjct: 568 NILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 627

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            N  TY+ +++         +A+++LD +   G KP+  SY  L+ G CK  + E A   
Sbjct: 628 ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 687

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++   G  PN V+Y  L+   C + + + A  LL  M      P + TYN+LI  L  
Sbjct: 688 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 747

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                 A ++   M++    P+  +Y  +I  LC  G   L ++  ++M  + C PN  T
Sbjct: 748 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 807

Query: 381 YNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEM 438
           Y+ L    G  GKV+EA  +   L  +    P E  Y  +I +    GK   AF  L  M
Sbjct: 808 YSSLIRALGQEGKVEEAENLFAEL-ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 866

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLI-----------------------EEALEIFVV-ME 474
            K G  P  +TY  LI+GL  E L+                       ++A+ +    + 
Sbjct: 867 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 926

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E D    V   NAL+  L  + R   + E+   MI +G  P++  Y  L+  +     ++
Sbjct: 927 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 986

Query: 535 LSAEVLKELQ 544
           L+  V K + 
Sbjct: 987 LAMGVFKHMS 996



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 223/471 (47%), Gaps = 20/471 (4%)

Query: 82   AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            A L +  M+ +GH  ++V    ++   C +     A++++++M   G  PD  SYT L+ 
Sbjct: 614  AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 673

Query: 142  CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
              CK   +  A  L  +M D G   N VTY +L+ G C    L+ +   L+ + + G  P
Sbjct: 674  GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 733

Query: 202  NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
            N  TY+ L+    K+     A +L   +I +G  PN+V+Y  ++ GLCK G T  A+  F
Sbjct: 734  NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 793

Query: 262  RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
              +  +G  PN+++Y+ L+R+L  EG+ EEA  L AE++     P  +TY  +I +    
Sbjct: 794  NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMS 853

Query: 322  GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQMFHRRCKPNEGT 380
            GK +HA   L  M+K   +P+  +Y  +I  L +E  + D  +  L  +      PN   
Sbjct: 854  GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV-----PN--- 905

Query: 381  YNGLAMLCGVG---KVQEAFAIIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
                   C  G     Q+A +++ + L         +    ++++L   G+ ++A +LL 
Sbjct: 906  -------CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLG 958

Query: 437  EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
             M   G  PD   Y+SL+  L     ++ A+ +F  M     +  ++ +  L+  LC+  
Sbjct: 959  SMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLH 1018

Query: 497  RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
            R   +   F+ M+ +   P++    +L++G+      +L  E L  ++ R+
Sbjct: 1019 RRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 1069



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 192/408 (47%), Gaps = 1/408 (0%)

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           +L+     K  +   M  ++ +   G       Y++L+  L  LG     +    R++ +
Sbjct: 320 HLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 379

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN   Y+ ++ A  K+  V  A  ++  +      P+  +Y  ++ G C++   + A
Sbjct: 380 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 439

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F  +  +G EPN V+Y+ L+  LC  GR  EA +L+ EM      PT  T    I +
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 499

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A ++  +M      P+  +Y  +I+ LC  G + + +    +M      PN
Sbjct: 500 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L  +L    +++ AF ++  +G     +    Y  +I   C  G   +A  ++ 
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN 619

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M + G + +  TY+++I+G C  G    AL I  +M +   KPD  ++  L+ G CK  
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + + +  +F  M++ G  PNE TYT L++G    ++L+ +  +L+ ++
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 727



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 192/439 (43%), Gaps = 31/439 (7%)

Query: 86   LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            L+ M   G KPD    T L+   CK +KM+ A  +   MV  G+ P+  +YT L++  CK
Sbjct: 653  LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 712

Query: 146  KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
               +  A  L+E M+  G   N  TYN L+ GL    N + + +    +I++G+ PN  T
Sbjct: 713  DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 772

Query: 206  YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            Y+ +++   K      A+++ + +I +G  PNL++Y+ L+  L +EG+ EEA   F +L 
Sbjct: 773  YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 832

Query: 266  SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG--------- 316
              G  P+ ++Y  ++ +  M G+ E A   L  M      PT+ TY +LI          
Sbjct: 833  RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 892

Query: 317  --------------SLAYHGKTDHALKVLDEMVKGRFRP--SAASYNPIIARLCSEGKVD 360
                          S  Y      A+ V+   +     P  S    N +++ L + G+  
Sbjct: 893  DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL-AELDPGLSVQVQNALVSNLSTAGRWF 951

Query: 361  LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKY 417
               + L  M  +   P++  YN L  LC + +V+    A  + + +  +        YK 
Sbjct: 952  EANELLGSMISQGLCPDQEAYNSL--LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 1009

Query: 418  VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            +I +LC+  +  +A      M    + PD    + LI GL  +G  +  +E   +ME   
Sbjct: 1010 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRR 1069

Query: 478  YKPDVDNFNALLLGLCKSR 496
            Y P    +  L     K R
Sbjct: 1070 YMPSFHIYTILAREASKKR 1088



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 68/135 (50%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  ++  L R G T       + M   G  P+   Y+++I  LC +G + +A  I   + 
Sbjct: 353 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVF 412

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E +  PD   + +++LG C+    D +L+VF  M ++G  PN  TY+ L+ G+     + 
Sbjct: 413 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVN 472

Query: 535 LSAEVLKELQLRQVV 549
            + ++++E+ L  ++
Sbjct: 473 EAFDLIREMILHGIL 487



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 31/258 (12%)

Query: 83   FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            F +LER    G  PD +    ++     + K++ A   +  M+ +G  P   +Y  L+  
Sbjct: 828  FAELER---HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 884

Query: 143  LCKKGNVGYAMQLVEKMED------YGYPT--------------------NTVTYNSLVR 176
            L  K     A Q +  + D      +GY T                    +    N+LV 
Sbjct: 885  L--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 942

Query: 177  GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             L   G   ++ + L  +I +GL P+   Y+ LL +  + R V  AM +   +  +G + 
Sbjct: 943  NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEV 1002

Query: 237  NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            +L  Y  L+  LC+  R +EA   F ++  + + P+ V   +L+  L  +G  +   E L
Sbjct: 1003 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 1062

Query: 297  AEMDGGDRSPTIVTYNIL 314
              M+     P+   Y IL
Sbjct: 1063 HIMETRRYMPSFHIYTIL 1080


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 218/460 (47%), Gaps = 3/460 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD K   A     +M++ G  P  V    L+  LC   + + A  + + M+S G +P   
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++ C C  G++  AM + +KM   G   N +TYN+L+ G C  GNLN +++ L+ +
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GL P+A+TY+ L+    +   +  A  L   ++  G  PN V+Y  ++ G     + 
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F  +   G  P+  +YN+++          EA     +M      P ++TY   
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD--LVVKCLDQMFHR 372
           I  L  +G+T  A K+  EM K  + P+  +Y+ +I  LC EG+ +   +   L ++ H 
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C+PN  TY  L   LCG G+  EA  ++ S+  K     +E Y+ ++   C+  K   A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             + Y M   GF      Y +LI  LC E  IEEA  IF  M E  +  D   +  LL G
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDG 773

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           L K   TDL L++  +M  +    N  TY +L   ++  D
Sbjct: 774 LLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALD 813



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 217/457 (47%), Gaps = 7/457 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+H L+ AF   +RMV  G  P+ V  + L+  LC   ++++A+ ++E MV  GI P   
Sbjct: 249 RNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVY 308

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  +  LC  G    A++L+ KM+  G   N  T+ +L+ GL   G    ++    ++
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GLVP   TY+ L+     E     A  +   +++ G  P+  +YN ++   C  G  
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F  +   G  PNV++YN L+   C +G    A  LL  M G    P   TY  L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  GK +HA  +   M++    P+  +Y  II    +  KVD  +    +M     
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN--KQNSSPQEF-YKYVITSLCRKGKTYQA 431
            P+  TYN   M+ G  K           G   KQ   P    Y   I  LCR G+T  A
Sbjct: 549 LPSSQTYN--VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLA 606

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA--LEIFVVMEEYDYKPDVDNFNALL 489
           F++ +EM K  + P+ YTYSSLI GLC EG  E+A    +   +  Y  +P+VD +  L+
Sbjct: 607 FKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            GLC   R   + ++   M +KG  P+E  Y  L+ G
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 232/464 (50%), Gaps = 3/464 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M  +G  P++   T L+  L +  K + AI +   M++ G++P   +Y  L+N LC 
Sbjct: 330 LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCV 389

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G    A  + + M  +G   +T TYN +++  C++G++ +++   D++++ G  PN  T
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K+  ++ AM+LL+ +   G KP+  +Y  L++G  + G+ E A   F  + 
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PN V+Y  ++       + ++A  L  +M      P+  TYN++I   +      
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A     +MVK    P+  +Y   I  LC  G+  L  K   +M  R   PN  TY+ L 
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629

Query: 386 M-LCGVGKVQEA--FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
             LC  G+ ++A  + ++  L +       + Y  ++  LC +G+ Y+A QL+  M K G
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             P    Y +L+ G C    +E AL IF  M+   ++  + ++ AL+  LCK    + + 
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQ 749

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +FQ M+EK    +E  +T+L++G+  + E +L  ++L  ++ R
Sbjct: 750 CIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESR 793



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 224/448 (50%), Gaps = 1/448 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M++ G +P ++    ++  LCK  ++++A  +M  +      P+A +YT L+   C+  
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N+  A  + ++M   G   N+VTY++L+ GLC  G L +++  L+ ++QKG+ P  +TY+
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             L +         A++LL  +  +G  PN+ ++  L++GL ++G+ E AI  +  + + 
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P  V+YN L+  LC+EGR+E A  +   M      P+  TYN +I      G    A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
           + + D+M+K    P+  +YN +I   C +G ++  ++ L+ M     KP+  TY  L + 
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
               GK++ A ++   +     S     Y  +I       K   A  L ++M + G  P 
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           S TY+ +I G      I EA      M +    P+V  + + + GLC++ RT L+ ++F 
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFH 611

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELE 534
            M ++   PN  TY+ L+ G+  +   E
Sbjct: 612 EMEKRNYFPNLYTYSSLIYGLCQEGRAE 639



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 213/446 (47%), Gaps = 1/446 (0%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           T LL  L K + +  A  +   M++SGI P   ++  ++N LCKKG V  A  ++  +  
Sbjct: 171 TTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFR 230

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           Y    N  TY SL+ G C   NL+ +    DR+++ G  PN+ TYS L+     E  +  
Sbjct: 231 YDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEE 290

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           AM +L++++ KG +P + +Y + L  LC  G + EA+     +  +G  PN+ ++  L+ 
Sbjct: 291 AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALIS 350

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            L  +G++E A  L  +M      PT VTYN LI  L   G+ + A  +   M+     P
Sbjct: 351 GLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP 410

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
           S  +YN II   C  G +   +   D+M      PN  TYN L    C  G +  A  ++
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + +           Y  +I+   R GK   A  L Y M ++G +P+  TY+++I G    
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
             +++AL +F  M E    P    +N ++ G  K+     +      M+++G +PN  TY
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 521 TILVEGIAHQDELELSAEVLKELQLR 546
           T  ++G+       L+ ++  E++ R
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKR 616



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 200/401 (49%), Gaps = 3/401 (0%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+T L+  L K   V  A  +  KM + G   + +T+N+++  LC  G + ++   +  +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +    PNAFTY+ L+    +   +  A  + D ++  G  PN V+Y+ L+ GLC EGR 
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+    ++  KG EP V +Y I L SLC  G   EA ELL +M      P I T+  L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L+  GK + A+ +  +M+     P+  +YN +I +LC EG+ +        M     
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            P+  TYN  +   C +G +Q+A  I   +  K  SSP    Y  +I   C++G    A 
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKML-KAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +LL  M   G  PD++TY+ LI G    G +E A  +F  M E+   P+   + A++ G 
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
               + D +L +F  M+E G +P+  TY +++ G +  + +
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 212/459 (46%), Gaps = 25/459 (5%)

Query: 75  RDHKLNDAFLQLERMVS--KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           + HK  D+ L+    +S  K  K D+    ++L  L +      A  V  +M+ S     
Sbjct: 86  QTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKS----- 140

Query: 133 ASSYTYLVNCLCK-KGNVGYAMQLVEKME---DYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
                      C+ +G V    Q + ++    D+GY     ++ +L+  L     ++ + 
Sbjct: 141 -----------CRNEGEVKRVTQFLSEINSKYDFGY--TLCSFTTLLIQLGKFDMVDLAR 187

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
               +++  G+ P+  T++ ++    K+  V  A  ++  I      PN  +Y  L+ G 
Sbjct: 188 DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH 247

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C+    + A   F  +   G +PN V+Y+ L+  LC EGR EEA ++L EM      PT+
Sbjct: 248 CRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTV 307

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            TY I + SL   G +  A+++L +M K    P+  ++  +I+ L  +GK ++ +    +
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M      P   TYN L   LC  G+ + AF I + + +  +    + Y  +I   C  G 
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A  +  +M K G +P+  TY++LI G C +G +  A+ +  +M+    KPD   +  
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L+ G  +  + + +  +F  M+E G  PN  TYT +++G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 72/135 (53%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  +I  LC+KG+  +A  ++  + +Y   P+++TY+SLI G C    ++ A  +F  M 
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +    P+   ++ L+ GLC   R + ++++ + M++KG  P   TYTI +  +       
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 535 LSAEVLKELQLRQVV 549
            + E+L +++ R  V
Sbjct: 325 EAVELLGKMKKRGCV 339



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 410 SPQEFYKYVITSLCR-KGKTYQAFQLLYEM-TKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
           +P +  + ++   CR +G+  +  Q L E+ +KY F     ++++L+  L    +++ A 
Sbjct: 128 APADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLAR 187

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++++ M     +P +  FN ++  LCK  R   +  +   +      PN  TYT L+ G 
Sbjct: 188 DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH 247

Query: 528 AHQDELELS 536
                L+L+
Sbjct: 248 CRNHNLDLA 256


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 237/464 (51%), Gaps = 5/464 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA L   RM+     P           LC+  +   A+ ++  M   G +PDA  Y  ++
Sbjct: 160 DALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVI 219

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           + L  +G V  A  L+++M   G   +  T+N LV GLC LG + ++ + +DR++ +G +
Sbjct: 220 HALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCM 279

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY FLL+   + R    A  +L  +     + N+V  N ++ G   EG+   A   
Sbjct: 280 PSVVTYGFLLQGLCRTRQADEACAMLGRL----PEVNVVMLNTVIRGCLTEGKLARATEL 335

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           +  + SKG  P+V +Y+IL+  LC  GR+  A  +L EM+    +P IVTY+ L+ S   
Sbjct: 336 YEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCR 395

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           +G  D A  +LD+M+   F  ++  YN II  LC +GK+D   + + +M  + CKP+  T
Sbjct: 396 NGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICT 455

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN +   LC    ++EA  I ++L  +   +    Y  +I +L R G+  +  +L  EM 
Sbjct: 456 YNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEML 515

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
            +G   D  +Y+ LI+ LC EG ++ ++ +   M     KP+  ++N L+  LCK+ +  
Sbjct: 516 LHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVR 575

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +LE+ + M+ +G  P+  TY  L+ G+        +  +L++L
Sbjct: 576 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 619



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 224/489 (45%), Gaps = 34/489 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  DA   L  M   G  PD V    +++ L     + +A  +++ M+  G   D +
Sbjct: 189 RLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVN 248

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  LV  LC  G V  A +LV++M   G   + VTY  L++GLC     +++   L RL
Sbjct: 249 TFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRL 308

Query: 195 IQ-------------------------------KGLVPNAFTYSFLLEAAYKERGVHAAM 223
            +                               KG  P+  TYS L+    K     +A+
Sbjct: 309 PEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAV 368

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           ++LD++  KG  PN+V+Y+ LL   C+ G  ++A      + +KGF  N   YN ++ +L
Sbjct: 369 RMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYAL 428

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C +G+ ++A  L+ EM      P I TYN +I  L  +   + A  +   +++     + 
Sbjct: 429 CKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANG 488

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQS 402
            +YN +I  L   G+    ++   +M    C+ +  +YNGL   LC  G V  + A+++ 
Sbjct: 489 ITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEE 548

Query: 403 LGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           +  K    P  F Y  +I  LC+ GK   A +L  EM   G TPD  TY++LI GLC  G
Sbjct: 549 MVTK-GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVG 607

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
               AL +   +   +  PD+  +N L+   CK R  D +  +    I  G +PNE T+ 
Sbjct: 608 WTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWG 667

Query: 522 ILVEGIAHQ 530
           ++V+    Q
Sbjct: 668 MMVQNFVRQ 676



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 213/468 (45%), Gaps = 45/468 (9%)

Query: 116 KAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           +A+ +++ M     + P   SY  +++ L +      A+ L  +M     P  T T+   
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
            R LC LG    +L  L  + + G VP+A  Y  ++ A   + GV  A  LLD+++  G 
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
             ++ ++N L+ GLC  GR  EA R    + ++G  P+VV+Y  LL+ LC   + +EA  
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           +L  +        +V  N +I      GK   A ++ + M      P   +Y+ ++  LC
Sbjct: 304 MLGRLP----EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE 413
             G+    V+ LD+M  + C PN  TY+ L    C  G   +A A++  +  K  S   +
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--- 470
            Y  +I +LC+ GK  QA +L+ EM   G  PD  TY+++I  LC   L+EEA  IF   
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 471 ----VVMEEYDYKP----------------------------DVDNFNALLLGLCKSRRT 498
               VV     Y                              DV ++N L+  LCK    
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNV 539

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAH----QDELELSAEVLKE 542
           D S+ + + M+ KG  PN  +Y +L+  +      +D LELS E+L +
Sbjct: 540 DRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ 587



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 156/362 (43%), Gaps = 33/362 (9%)

Query: 222 AMKLLDDIIAK-GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A+ LLD +  +    P+  SYNV+L+ L +     +A+  +R +      P   ++ +  
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           R+LC  GR  +A  LL  M      P  V Y  +I +L   G    A  +LDEM+     
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
               ++N ++  LC  G+V    + +D+M  + C P+  TY  L   LC   +  EA A+
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 400 I-------------------------------QSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           +                               + +G+K        Y  ++  LC+ G+ 
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A ++L EM + G  P+  TYS+L+   C  G+ ++A  +   M    +  +   +N +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +  LCK  + D +  + Q M  +G  P+  TY  ++  + + D +E +  + + L    V
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 549 VS 550
           V+
Sbjct: 485 VA 486



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 5/234 (2%)

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNG 383
           D AL +LD +   R  P   S    + R    G+    +  LDQM  R    P+  +YN 
Sbjct: 91  DRALALLDSLPASRLPPLRESLLLPLLRSLPPGRA---LHLLDQMPRRFAVSPSFRSYNV 147

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           +              ++     +    P  F +     +LCR G+   A  LL  M ++G
Sbjct: 148 VLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHG 207

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD+  Y ++I  L  +G + EA  +   M       DV+ FN L+LGLC   R   + 
Sbjct: 208 CVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAA 267

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
            +   M+ +G MP+  TY  L++G+    + + +  +L  L    VV  + V R
Sbjct: 268 RLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIR 321


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/460 (31%), Positives = 231/460 (50%), Gaps = 7/460 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  L+ AF   +RMV +G  P+ V  + L+  LC   ++ +A+ ++E M+  GI P   
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 304

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  +  LC   +   A++LV +M+  G   N  TY +L+ GL  LG L  ++    ++
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++GLVPN  TY+ L+           A+K+   +   G   N  +YN ++ GLC  G  
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 424

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+  F  +   G  P VV+YN L+     +G    A  LL  M      P   TYN L
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  GK + A     EMV+    P+  SY  +I     +GKVD+ +  L +M    C
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK---QNSSPQEF-YKYVITSLCRKGKTYQ 430
            PN  +YN  A++ G+ K +  F+  + + +K   Q   P    Y  +I  LCR G+T  
Sbjct: 545 NPNVESYN--AVINGLSK-ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF++ ++M K    P+ YTYSSLI GLC EG  +EA  +   ME     PD   F +L+ 
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 661

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
           G     R D +  + + M++ G  PN  TY++L++G+  +
Sbjct: 662 GFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 244/460 (53%), Gaps = 3/460 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M++ G +P ++    L+  L K  K+++A  ++  +    + PD  +YT L+   C+ 
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            N+  A  + ++M   G   N+VTY++L+ GLC  G ++++L  L+ +I+KG+ P  +TY
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  + A         A++L+  +  +G +PN+ +Y  L++GL + G+ E AI  +  +  
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  PN V+YN L+  LC+ GR+  A ++   M+G        TYN +I  L   G  + 
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-A 385
           A+ + ++M+K    P+  +YN +I    ++G V+   + LD M    C+P+E TYN L +
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 386 MLCGVGKVQEA-FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                GK++ A F   + +    N +P   Y  +I    + GK   A  LL  M + G  
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVS-YTALIDGHSKDGKVDIALSLLKRMEEMGCN 545

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  +Y+++I GL  E    EA +I   M E    P+V  +  L+ GLC++ RT  + ++
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F  M ++  +PN  TY+ L+ G+  + + + +  +LKE++
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEME 645



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 205/390 (52%), Gaps = 2/390 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM  +G +P+V   T L+  L +  K++ AI +   M+  G++P+  +Y  L+N LC  G
Sbjct: 328 RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
               A+++   ME +G   NT TYN +++GLC+ G++ +++   +++++ G +P   TY+
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+     +  V+ A +LLD +   G +P+  +YN L++G  K G+ E A  +F+++   
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  PN VSY  L+     +G+ + A  LL  M+    +P + +YN +I  L+   +   A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            K+ D+MV+    P+  +Y  +I  LC  G+     K    M  R+C PN  TY+ L   
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  GK  EA  +++ +  K  +  +  +  +I      G+   AF LL  M   G  P+
Sbjct: 628 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPN 687

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
             TYS L++GL  E L+ E  +IF +++ Y
Sbjct: 688 YRTYSVLLKGLQKECLLLEE-KIFPLVDNY 716



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 183 NLNQSLQFLDRLIQ-KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           N+N  +  L+RL++ +   P       +++A   E  +      L++I   G   +L S 
Sbjct: 107 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSC 166

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           N LL  L K    E A   ++ + + G +P+++++N L+  L  +G+  EA  +L+++  
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
            D SP + TY  LI     +   D A  V D MVK    P++ +Y+ +I  LC+EG+VD 
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 362 VVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +  L++M  +  +P   TY   +  LC +   +EA  ++  +  +      + Y  +I+
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L R GK   A  L ++M K G  P++ TY++LI  LC+ G    AL+IF  ME +    
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +   +N ++ GLC     + ++ +F+ M++ G +P   TY  L+ G   +  +  +A +L
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 97/181 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D K++ A   L+RM   G  P+V     ++  L K N+  +A K+ + MV  G++
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLL 580

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++ LC+ G   +A ++   ME      N  TY+SL+ GLC  G  +++   
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEIL 640

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + +KGL P+  T++ L++       +  A  LL  ++  G KPN  +Y+VLL GL K
Sbjct: 641 LKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700

Query: 251 E 251
           E
Sbjct: 701 E 701


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 229/461 (49%), Gaps = 4/461 (0%)

Query: 68  NNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS 127
           +NN T   +  ++DA     RMV    +P V +    L    K  +    + +   M   
Sbjct: 61  SNNST---NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLF 117

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G+  +  S   L+NCLC+  +V +A+ ++ KM   G      T+N+L+ GLC  G + ++
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEA 177

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           ++  + ++++G  PN  +Y+ ++    K      A+ +   +   G KP++V+YN ++  
Sbjct: 178 VELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           LCK+    +A+ F  ++  +G  PNV +YN ++   C+ G+  EA  L  EM G D  P 
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            VT  IL+  L   G    A  V + M +    P+ ++YN ++   C +  ++   K  +
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            M  + C P   +YN L    C   ++ EA +++  + +K  +     Y  ++  LC+ G
Sbjct: 358 IMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFG 417

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  +  EM  YG  P+  TYS L+ G C  G ++EAL++   M+E   +P++ +  
Sbjct: 418 RPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHT 477

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            L+ G+  + + +++ E+F  +   G  P   TYT++++G+
Sbjct: 478 ILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGL 518



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 236/467 (50%), Gaps = 8/467 (1%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDL-------CKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           Q   +VS  ++ D+   T+ +Y L       C+ N +  A+ ++  M   GI P AS++ 
Sbjct: 103 QYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFN 162

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LC +G +  A++L  +M   G+  N ++YN+++ GLC  GN + ++    ++ Q 
Sbjct: 163 ALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQN 222

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  TY+ ++++  K+R V+ AM+ L +++ +G  PN+ +YN ++ G C  G+  EA
Sbjct: 223 GCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEA 282

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R F+++  +   P+ V+  IL+  LC EG   EA  +   M      P I TYN L+  
Sbjct: 283 TRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDG 342

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                  + A KV + M++    P   SYN +I   C   ++D     L +M+H+   P+
Sbjct: 343 YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPD 402

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ L   LC  G+ +EA  I + + +         Y  ++   C+ G   +A +LL 
Sbjct: 403 TVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLK 462

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M +    P+   ++ LI G+ + G +E A E+F  +     +P +  +  ++ GL K  
Sbjct: 463 SMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEG 522

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +D + ++F+ M + G +PN  +Y ++++G     +   +  ++ E+
Sbjct: 523 LSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 569



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 223/456 (48%), Gaps = 35/456 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A      MV +GH+P+V+    ++  LCK      A+ V + M  +G  PD  +Y 
Sbjct: 173 KIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYN 232

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  AM+ + +M D G P N  TYN +V G C+LG LN++ +    ++ +
Sbjct: 233 TIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR 292

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++P+  T + L++   KE  V  A  + + +  KG +PN+ +YN L+ G C +    EA
Sbjct: 293 DVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEA 352

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F  +  +G  P V SYNIL+   C   R +EA  LLAEM     +P  VTY+ L+  
Sbjct: 353 KKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 412

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+   AL +  EM      P+  +Y+ ++   C  G +D  +K L  M  ++ +PN
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPN 472

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                                I+              +  +I  +   GK   A +L  +
Sbjct: 473 ---------------------IVH-------------HTILIEGMFIAGKLEVAKELFSK 498

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +   G  P   TY+ +I+GL  EGL +EA ++F  ME+  + P+  ++N ++ G  +++ 
Sbjct: 499 LFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQD 558

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           +  ++ +   M+ K    N +T+ +L++ +  QDE+
Sbjct: 559 SSTAIRLIDEMVGKRFSANLSTFQMLLD-LESQDEI 593



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 172/331 (51%), Gaps = 2/331 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  +NDA   L  M+ +G  P+V     +++  C   ++ +A ++ + MV   ++
Sbjct: 236 DSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVM 295

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  + T LV+ LCK+G V  A  + E M + G   N  TYN+L+ G C+   +N++ + 
Sbjct: 296 PDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKV 355

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +I++G  P   +Y+ L+    K R +  A  LL ++  K   P+ V+Y+ L+ GLC+
Sbjct: 356 FEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR +EA+  F+++ S G  PN+V+Y+ILL   C  G  +EA +LL  M      P IV 
Sbjct: 416 FGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVH 475

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           + ILI  +   GK + A ++  ++     RP+  +Y  +I  L  EG  D       +M 
Sbjct: 476 HTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKME 535

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQ 401
                PN  +YN   M+ G  + Q++   I+
Sbjct: 536 DDGFLPNSCSYN--VMIQGFLQNQDSSTAIR 564



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 190/419 (45%), Gaps = 36/419 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P  + +   +    KK      + L  +M+ +G   N  + N L+  LC L +++ ++  
Sbjct: 86  PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L ++ + G+ P A T+                                   N L+ GLC 
Sbjct: 146 LGKMFKLGIHPTASTF-----------------------------------NALINGLCN 170

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG+ +EA+  F ++  +G EPNV+SYN ++  LC  G    A ++  +M+     P +VT
Sbjct: 171 EGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVT 230

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN +I SL      + A++ L EM+     P+  +YN ++   C  G+++   +   +M 
Sbjct: 231 YNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMV 290

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            R   P+  T   L   LC  G V EA  + +++  K        Y  ++   C +    
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMN 350

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A ++   M + G  P  ++Y+ LI G C    ++EA  +   M      PD   ++ L+
Sbjct: 351 EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            GLC+  R   +L +F+ M   G +PN  TY+IL++G      L+ + ++LK +Q +++
Sbjct: 411 QGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 170/378 (44%), Gaps = 34/378 (8%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           +++ +L    R+++    P+   +   L +  K++     + L + +   G   N+ S N
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           VL+  LC+    + A+     +   G  P   ++N L+  LC EG+ +EA EL  EM   
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P +++YN +I  L   G T  A+ V  +M +   +P   +YN II  LC +  V+  
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           ++ L +M  R   PN  TYN +                                  +   
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCM----------------------------------VHGF 273

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C  G+  +A +L  EM      PD+ T + L+ GLC EG++ EA  +F  M E   +P++
Sbjct: 274 CILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNI 333

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +NAL+ G C  R  + + +VF++MI +G  P   +Y IL+ G      ++ +  +L E
Sbjct: 334 STYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAE 393

Query: 543 LQLRQVVSESAVERLVMQ 560
           +  + +  ++     +MQ
Sbjct: 394 MYHKALNPDTVTYSTLMQ 411



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 144/276 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A L  E M  KG +P++     L+   C    M +A KV E+M+  G  P   
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+N  CK   +  A  L+ +M       +TVTY++L++GLC  G   ++L     +
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GL+PN  TYS LL+   K   +  A+KLL  +  K  +PN+V + +L+ G+   G+ 
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL 489

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A   F  L + G  P + +Y ++++ L  EG  +EA +L  +M+     P   +YN++
Sbjct: 490 EVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVM 549

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           I     +  +  A++++DEMV  RF  + +++  ++
Sbjct: 550 IQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 238/470 (50%), Gaps = 1/470 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K +DA    + M+     P +V  +     + +  +    +   + +  +GI  +  +
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              ++NC C+     +A  ++ K+   GY  +T T+N+L+ GLC+ G +++++  +DR++
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  TY+ ++    +      A  +L  +  +  K ++ +Y+ ++  LC++G  +
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            AI  F+++ +KG + +VV+YN L+R LC  G+W +   LL +M   +  P ++T+N+L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 GK   A ++  EM+     P+  +YN ++   C + ++      LD M   +C 
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  T+  L    C V +V +   + +++  +   +    Y  ++   C+ GK   A +L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM  +G  PD  TY  L+ GLC  G +E+ALEIF  +++      +  +  ++ G+CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             + + +  +F  +  KG  PN  TYT+++ G+  +  L  +  +L++++
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 234/459 (50%), Gaps = 1/459 (0%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
            C+  K   A  V+  ++  G  PD +++  L+N LC +G V  A+ LV++M + G   +
Sbjct: 133 FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPD 192

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            VTYNS+V G+C  G+ + +   L ++ ++ +  + FTYS ++++  ++  + AA+ L  
Sbjct: 193 MVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           ++  KG K ++V+YN L+ GLCK G+  +     +D+ S+   PNV+++N+LL     EG
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           + +EANEL  EM     SP I+TYN L+       +   A  +LD MV+ +  P   ++ 
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            +I   C   +VD  +K    +  R    N  TY+ L    C  GK++ A  + Q + + 
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  ++  LC  GK  +A ++  ++ K         Y+++I G+C  G +E+A
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             +F  +     KP+V  +  ++ GLCK      +  + + M E G  PN+ TY  L+  
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
                +L  SA++++E++     ++++  ++V+     G
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 162/314 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  RD  ++ A    + M +KG K  VV   +L+  LCKA K      +++ MVS  I+
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L++   K+G +  A +L ++M   G   N +TYN+L+ G CM   L+++   
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD +++    P+  T++ L++     + V   MK+  +I  +G   N V+Y++L+ G C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A   F+++ S G  P+V++Y ILL  LC  G+ E+A E+  ++        IV 
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  +I  +   GK + A  +   +     +P+  +Y  +I+ LC +G +      L +M 
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535

Query: 371 HRRCKPNEGTYNGL 384
                PN+ TYN L
Sbjct: 536 EDGNAPNDCTYNTL 549



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 149/290 (51%), Gaps = 1/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + M+++G  P+++    L+   C  N++ +A  ++++MV +   
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++T L+   C    V   M++   +   G   N VTY+ LV+G C  G +  + + 
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  G++P+  TY  LL+       +  A+++ +D+        +V Y  ++ G+CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+A   F  LP KG +PNV++Y +++  LC +G   EAN LL +M+    +P   T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YN LI +    G    + K+++EM    F   A+S   +I  L S G++D
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GELD 594



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 34/296 (11%)

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + ++AI  F+++      P +V ++    ++    ++    +   +++    +  I T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I+I       KT  A  VL +++K  + P   ++N +I  LC EGKV   V  +D+M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            C+P+  T                                  Y  ++  +CR G T  AF
Sbjct: 188 GCQPDMVT----------------------------------YNSIVNGICRSGDTSLAF 213

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            +L +M +     D +TYS++I  LC +G I+ A+ +F  ME    K  V  +N+L+ GL
Sbjct: 214 DMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           CK+ + +    + + M+ +  +PN  T+ +L++    + +L+ + E+ KE+  R +
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 7/231 (3%)

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  EM++ R  P    ++   + +    + +LV+    Q+       N  T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 383 GLA-MLCGVGKVQEAFAI---IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            +    C   K   A+++   +  LG + +++    +  +I  LC +GK  +A  L+  M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTT---FNTLINGLCLEGKVSKAVVLVDRM 184

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            + G  PD  TY+S++ G+C  G    A ++   MEE + K DV  ++ ++  LC+    
Sbjct: 185 VENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           D ++ +F+ M  KG   +  TY  LV G+    +    A +LK++  R++V
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 79/133 (59%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   CR  KT  A+ +L ++ K G+ PD+ T+++LI GLC+EG + +A+ +   M E  
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENG 188

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            +PD+  +N+++ G+C+S  T L+ ++ + M E+    +  TY+ +++ +     ++ + 
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 538 EVLKELQLRQVVS 550
            + KE++ + + S
Sbjct: 249 SLFKEMETKGIKS 261


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 234/504 (46%), Gaps = 36/504 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA  Q  RM+   H P ++Q   +L    K      A+ +   +   GI PD  +   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NC C  G + +   ++ K+   GY  +T+T+ +L++GLC+ G +N++L F D+L+ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +  +  +Y  L+    K      A+KL+  I  +  KPN+  YN ++  LCK     EA 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG   +VV+Y  L+   C+  + +EA  LL EM     +P + TYNIL+ +L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAA---------------------------------- 344
              GK   A  VL  M+K   +P                                     
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339

Query: 345 -SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            SY  +I   C    VD  +    +M  +   P   TY+ L   LC  G++   + +I  
Sbjct: 340 HSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + ++   +    Y  +I  LC+ G   +A  L  +M   G  P S+T++ L+ GLC  G 
Sbjct: 400 MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGR 459

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++A E F  +    Y  DV  +N ++ G CK    + +L +   M E G +PN  T+ I
Sbjct: 460 LKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDI 519

Query: 523 LVEGIAHQDELELSAEVLKELQLR 546
           ++  +  +DE + + ++L+++  R
Sbjct: 520 IINALFKKDENDKAEKLLRQMICR 543



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 204/466 (43%), Gaps = 69/466 (14%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            F  L +++ +G++P  +  T L+  LC   ++ KA+   + +++ GI  D  SY  L+N
Sbjct: 113 GFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLIN 172

Query: 142 CLCKKGNVGYAMQLVEK-----------------------------------MEDYGYPT 166
            +CK G+   A++LV K                                   M   G   
Sbjct: 173 GVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISA 232

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           + VTY +L+ G C+   L +++  L+ ++ K + PN +TY+ L++A  KE  V  A  +L
Sbjct: 233 DVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVL 292

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             ++    KP++++Y+ L+ G       ++A   F  +   G  P+V SY IL+   C  
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKN 352

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
              +EA  L  EM   +  P IVTY+ LI  L   G+  +   ++DEM       +  +Y
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITY 412

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
           N +I  LC  G +D  +   ++M  +  +P   T+  L                      
Sbjct: 413 NSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTIL---------------------- 450

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                       +  LC+ G+   A +   ++   G+  D Y Y+ +I G C +GL+EEA
Sbjct: 451 ------------LDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L +   MEE    P+   F+ ++  L K    D + ++ + MI +G
Sbjct: 499 LTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 187/435 (42%), Gaps = 42/435 (9%)

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           NV  A+    +M    +    + +N ++     + + + ++    RL  KG+ P+  T +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+        +     +L  I+ +G +P+ +++  L+ GLC +G+  +A+ F   L ++
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158

Query: 268 GF-----------------------------------EPNVVSYNILLRSLCMEGRWEEA 292
           G                                    +PNV  YN ++ +LC      EA
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA 218

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             L +EM     S  +VTY  LI       K   A+ +L+EMV     P+  +YN ++  
Sbjct: 219 YGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQN 408
           LC EGKV      L  M     KP+  TY    +G  ++  + K Q  F  +  +G   +
Sbjct: 279 LCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPD 338

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  +I   C+     +A  L  EM +    P   TYSSLI GLC  G I    +
Sbjct: 339 VHS---YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD 395

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   M +     +V  +N+L+ GLCK+   D ++ +F  M ++G  P   T+TIL++G+ 
Sbjct: 396 LIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLC 455

Query: 529 HQDELELSAEVLKEL 543
               L+ + E  ++L
Sbjct: 456 KGGRLKDAQEAFQDL 470



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 158/328 (48%), Gaps = 1/328 (0%)

Query: 56  DSVYTKPNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKM 114
           D   TKPN +  N   D   +   +++A+     M +KG   DVV  T L+Y  C A+K+
Sbjct: 191 DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKL 250

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           K+AI ++  MV   I P+  +Y  LV+ LCK+G V  A  ++  M       + +TY++L
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTL 310

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           + G  ++  L ++    + +   G+ P+  +Y+ L+    K + V  A+ L  ++  K  
Sbjct: 311 MDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P +V+Y+ L+ GLCK GR         ++  +G   NV++YN L+  LC  G  + A  
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIA 430

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L  +M      P   T+ IL+  L   G+   A +   +++   +      YN +I   C
Sbjct: 431 LFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC 490

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
            +G ++  +  L +M    C PN  T++
Sbjct: 491 KQGLLEEALTMLSKMEENGCVPNAVTFD 518



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 141/265 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L  M+    KPDV+  + L+       ++KKA  V   M   G+ 
Sbjct: 277 DALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVT 336

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SYT L+N  CK   V  A+ L ++M         VTY+SL+ GLC  G ++     
Sbjct: 337 PDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +  +G+  N  TY+ L++   K   +  A+ L + +  +G +P   ++ +LL GLCK
Sbjct: 397 IDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCK 456

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++A   F+DL +KG+  +V  YN+++   C +G  EEA  +L++M+     P  VT
Sbjct: 457 GGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVT 516

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           ++I+I +L    + D A K+L +M+
Sbjct: 517 FDIIINALFKKDENDKAEKLLRQMI 541



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 142/315 (45%), Gaps = 1/315 (0%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P ++ +N +L    K      A+     L  KG +P++++ NIL+   C  G+      +
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           LA++      P  +T+  LI  L   G+ + AL   D+++    +    SY  +I  +C 
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G     +K + ++  R  KPN   YN +   LC    V EA+ +   +  K  S+    
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I   C   K  +A  LL EM      P+ YTY+ L+  LC EG ++EA  +  VM 
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +   KPDV  ++ L+ G         +  VF  M   G  P+  +YTIL+ G      ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 535 LSAEVLKELQLRQVV 549
            +  + KE+  + +V
Sbjct: 357 EALNLFKEMHQKNMV 371



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 141/299 (47%), Gaps = 1/299 (0%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +      P ++ +N +L S      +  A  L   ++     P ++T NI
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI    + G+      VL +++K  ++P   ++  +I  LC +G+V+  +   D++  + 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            K ++ +Y  L   +C +G  + A  +++ +  +      E Y  +I +LC+     +A+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L  EMT  G + D  TY++LI G C+   ++EA+ +   M      P+V  +N L+  L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           CK  +   +  V  +M++    P+  TY+ L++G     EL+ +  V   + L  V  +
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPD 338



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 99/195 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +++A    + M  K   P +V  ++L+  LCK+ ++     +++ M   GI  +  
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVI 410

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK G++  A+ L  KM+D G    + T+  L+ GLC  G L  + +    L
Sbjct: 411 TYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDL 470

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG   + + Y+ ++    K+  +  A+ +L  +   G  PN V++++++  L K+   
Sbjct: 471 LTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDEN 530

Query: 255 EEAIRFFRDLPSKGF 269
           ++A +  R +  +G 
Sbjct: 531 DKAEKLLRQMICRGL 545



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 66/126 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A     +M  +G +P     T LL  LCK  ++K A +  + +++ G   D  
Sbjct: 421 KNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVY 480

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  ++N  CK+G +  A+ ++ KME+ G   N VT++ ++  L      +++ + L ++
Sbjct: 481 KYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540

Query: 195 IQKGLV 200
           I +GL+
Sbjct: 541 ICRGLL 546



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/157 (17%), Positives = 66/157 (42%)

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           +  V +A +    +   +++ P   +  ++ S  +      A  L + +   G  PD  T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
            + LI   C  G I     +   + +  Y+P    F  L+ GLC   + + +L     ++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +G   ++ +Y  L+ G+    +   + ++++++  R
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGR 193


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 244/489 (49%), Gaps = 7/489 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDA 133
           R      A   L  +  +G   DV     +L  +C    + +A++++ +++ S G  PD 
Sbjct: 158 RASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDV 217

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            SY  ++  LC     G+   L+E+M   G P N VT+++L+  LC  G   +  +   +
Sbjct: 218 VSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQ 277

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + + G  P+   Y+ +++   KE  +  A  +L+ + + G  PN+V YN LL GLC   R
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA     ++  K    + V++NIL+  LC  G  +   E+L +M      P ++TY  
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTT 397

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I      G  D A+ +L  M     RP+  SY  ++  LCS  +     + + QM  + 
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  T+N L   LC  G V++A  +++ +     S     Y  VI  L + G T +A 
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +LL  M K G +P++  YSS+   L  EG I + +++F  +++   + D   +NA++  L
Sbjct: 518 ELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSL 577

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           CK   TD ++E    M+  G +PNE+TYTIL+ G+A +  ++ + E+L EL      S+ 
Sbjct: 578 CKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL-----CSKG 632

Query: 553 AVERLVMQY 561
           A+ + +M++
Sbjct: 633 ALRKHLMKH 641



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 199/379 (52%), Gaps = 2/379 (0%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  TY  LVR LC  G +  +L  LD + ++G  P    Y   LEAA +  G   A+ +L
Sbjct: 110 NAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVL 169

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD-LPSKGFEPNVVSYNILLRSLCM 285
            D+  +G   ++ + N++L  +C +G  +EA+R  RD LPS G EP+VVSYN +LR LCM
Sbjct: 170 RDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCM 229

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
             RW    +L+ EM      P IVT++ LIG L  +G  +   +V  +M +    P    
Sbjct: 230 ARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRM 289

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
           Y  II  +C E ++++    L++M      PN   YN L   LC   + +EA  ++  + 
Sbjct: 290 YATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF 349

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           +K        +  ++  LC+ G   +  ++L +M ++G  PD  TY+++I G C EGLI+
Sbjct: 350 DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLID 409

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+ +   M     +P+  ++  +L GLC + R   + E+   MI++G  PN  T+  L+
Sbjct: 410 EAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLI 469

Query: 525 EGIAHQDELELSAEVLKEL 543
             +  +  +E + E+LK++
Sbjct: 470 NFLCKKGLVEQAIELLKQM 488



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 137/319 (42%), Gaps = 10/319 (3%)

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           DD    GG    +S   L+  LC  GRT EA R      + G    VV+YN ++   C  
Sbjct: 38  DDAPGGGGPRRRLS--ALIRSLCAAGRTAEAARALS---AAGGGAGVVAYNAMVAGYCRA 92

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G+   A  L A +     +P   TY  L+ +L   G+   AL VLD+M +    P+   Y
Sbjct: 93  GQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMY 149

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGN 405
           +  +   C        V  L  +  R C  + G  N  L  +C  G V EA  +++ L  
Sbjct: 150 HVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLP 209

Query: 406 KQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                P    Y  V+  LC   +      L+ EM   G  P+  T+S+LI  LC  GL E
Sbjct: 210 SFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFE 269

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
              E+   M E+   PDV  +  ++ G+CK  R +++  +   M   G  PN   Y  L+
Sbjct: 270 RVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLL 329

Query: 525 EGIAHQDELELSAEVLKEL 543
           +G+   D  E +  +L E+
Sbjct: 330 KGLCSADRWEEAEGLLAEM 348


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 241/478 (50%), Gaps = 37/478 (7%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MVS+G +PDV     L+  LC+A++++ AI +ME M   G++PD  ++T ++    ++GN
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGN 245

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL-IQKGLVPNAFTYS 207
           +  AM++ E+M + G     VT N LV G C  G + ++L+F++ + +++G  P+ +T++
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFN 305

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    K   V  A++++D ++ +G  P++ +YN L++GLCK G  +EA++    +  +
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              PN V+YN ++ +LC E + EEA +L   + G    P + TYN LI  L        A
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVA 425

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
           +++  EM      P   +YN +I  LC  GK+   +  L +M    C  N  TYN L   
Sbjct: 426 MELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDG 485

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C   ++ EA  I   +  +  S     Y  +I  LC+  +  +A QL+ +M   G  PD
Sbjct: 486 FCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPD 545

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS----------- 495
            +TY+SL+   C  G I++A +I   M     +PD+  +  L+ GLCK+           
Sbjct: 546 KFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLR 605

Query: 496 ------------------------RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
                                   +R+  ++ +F+ MIEK + P+  TY I+  G+  
Sbjct: 606 TIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQ 663



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 237/456 (51%), Gaps = 11/456 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME-MMVSSGIIPDASSYT 137
           L+ A    E+MV  G     V    L+   CK  ++++A++ +E M +  G  PD  ++ 
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFN 305

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN L K G+V +A+++++ M   G+  +  TYNSL+ GLC LG ++++++ L+++I++
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  TY+ ++    KE  V  A KL   +  KG  P++ +YN L+ GLC       A
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVA 425

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  ++++ +KG  P+  +YN+L+ SLC  G+ +EA  LL EM+    +  ++TYN LI  
Sbjct: 426 MELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDG 485

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              + +   A ++ D+M       ++ +YN +I  LC   +V+   + +DQM     +P+
Sbjct: 486 FCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPD 545

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           + TYN  L   C  G +++A  I+Q++ +         Y  +I  LC+ G+   A +LL 
Sbjct: 546 KFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLR 605

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK-- 494
            +   G     + Y+ +I+ L      +EA+ +F  M E    PD   +  +  GLC+  
Sbjct: 606 TIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665

Query: 495 ---SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
                  D  +E    M+E+G +P  +++ +L EG+
Sbjct: 666 GPIGEAVDFVME----MLERGYVPEFSSFYMLAEGL 697



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 231/449 (51%), Gaps = 4/449 (0%)

Query: 75  RDHKLNDAFLQLERM-VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           ++ ++ +A   +E M + +G  PD      L+  L K   +K A++VM+MM+  G  PD 
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI 336

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  L++ LCK G V  A++++ +M +     NTVTYN+++  LC    + ++ +    
Sbjct: 337 YTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALV 396

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L  KG++P+  TY+ L++     R    AM+L  ++  KG  P+  +YN+L+  LC  G+
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EA+   +++   G   NV++YN L+   C   R  EA E+  +M+    S   VTYN 
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L    + + A +++D+M+    RP   +YN ++   C  G +      +  M    
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C+P+  TY  L A LC  G+V+ A  +++++  K  +     Y  VI +L R+ ++ +A 
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAV 636

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEG-LIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           +L  EM +    PD+ TY  + RGLC  G  I EA++  + M E  Y P+  +F  L  G
Sbjct: 637 RLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEG 696

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMP-NETT 519
           L         +++  M++EK +   NE T
Sbjct: 697 LFSLAMVGTLIKLIDMVMEKAKFSDNEVT 725



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 233/447 (52%), Gaps = 2/447 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LL  L   NK+K        MVS GI PD S++  L+  LC+   +  A+ L+E+MED+G
Sbjct: 166 LLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFG 225

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              +  T+ ++++G    GNL+ +++  +++++ G V    T + L+    KE  +  A+
Sbjct: 226 LLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEAL 285

Query: 224 KLLDDI-IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           + ++++ + +G  P+  ++N+L+ GL K G  + A+     +  +GF+P++ +YN L+  
Sbjct: 286 RFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISG 345

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  G  +EA ++L +M   D SP  VTYN +I +L    + + A K+   +      P 
Sbjct: 346 LCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPD 405

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
             +YN +I  LC      + ++   +M  + C P+E TYN L   LC  GK+QEA  +++
Sbjct: 406 VCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLK 465

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +     +     Y  +I   C+  +  +A ++  +M   G + +S TY++LI GLC   
Sbjct: 466 EMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSE 525

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +EEA ++   M     +PD   +N+LL   CK+     + ++ Q M   G  P+  TY 
Sbjct: 526 RVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYG 585

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQV 548
            L+ G+     +E + ++L+ +Q++ +
Sbjct: 586 TLIAGLCKAGRVEAATKLLRTIQMKGI 612



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 225/439 (51%), Gaps = 14/439 (3%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE----KMEDYGYPTN 167
           N++ + +  ME  V  G++ +   Y +L+N L      G  ++LVE     M   G   +
Sbjct: 141 NEILQFVDAME--VEFGVVANTHFYNFLLNVLVD----GNKLKLVEIAHSNMVSRGIRPD 194

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
             T+N L++ LC    +  ++  ++ +   GL+P+  T++ +++   +E  +  AM++ +
Sbjct: 195 VSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKE 254

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP-SKGFEPNVVSYNILLRSLCME 286
            ++  G     V+ NVL+ G CKEGR EEA+RF  ++   +GF P+  ++N+L+  L   
Sbjct: 255 QMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKT 314

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G  + A E++  M      P I TYN LI  L   G+ D A+KVL++M++    P+  +Y
Sbjct: 315 GHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTY 374

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN 405
           N II+ LC E +V+   K    +  +   P+  TYN L   LC       A  + + +  
Sbjct: 375 NTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKT 434

Query: 406 KQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           K    P EF Y  +I SLC +GK  +A  LL EM   G   +  TY++LI G C    I 
Sbjct: 435 K-GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIA 493

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA EIF  ME      +   +N L+ GLCKS R + + ++   MI +G  P++ TY  L+
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553

Query: 525 EGIAHQDELELSAEVLKEL 543
                  +++ +A++++ +
Sbjct: 554 TYFCKAGDIKKAADIVQTM 572



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 192/419 (45%), Gaps = 39/419 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A   L +M+ +   P+ V    ++  LCK N++++A K+  ++   GI+PD  +Y 
Sbjct: 351 EVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYN 410

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC   N   AM+L ++M+  G   +  TYN L+  LC  G L ++L  L  +   
Sbjct: 411 SLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVS 470

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   N  TY+ L++   K + +  A ++ D +  +G   N V+YN L+ GLCK  R EEA
Sbjct: 471 GCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEA 530

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +    +  +G  P+  +YN LL   C  G  ++A +++  M      P IVTY  LI  
Sbjct: 531 SQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAG 590

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A K+L  +       +  +YNP+I  L                F R+    
Sbjct: 591 LCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQAL----------------FRRK---- 630

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY-QAFQLLY 436
                         + +EA  + + +  K  +     YK V   LC+ G    +A   + 
Sbjct: 631 --------------RSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVM 676

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNALLLGLCK 494
           EM + G+ P+  ++  L  GL    ++   +++  +VME+  +    DN   ++ G  K
Sbjct: 677 EMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFS---DNEVTMIRGFLK 732



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 203/425 (47%), Gaps = 3/425 (0%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P +S +  +++ L K G       ++++M+      +  +    +      G  N+ LQF
Sbjct: 87  PSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQF 146

Query: 191 LDRL-IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           +D + ++ G+V N   Y+FLL        +        +++++G +P++ ++N+L+  LC
Sbjct: 147 VDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALC 206

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           +  +   AI    ++   G  P+  ++  +++    EG  + A  +  +M       T V
Sbjct: 207 RAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNV 266

Query: 310 TYNILIGSLAYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           T N+L+      G+ + AL+ ++EM ++  F P   ++N ++  L   G V   ++ +D 
Sbjct: 267 TVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDM 326

Query: 369 MFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M      P+  TYN L + LC +G+V EA  ++  +  +  S     Y  +I++LC++ +
Sbjct: 327 MLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQ 386

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A +L   +T  G  PD  TY+SLI+GLC+      A+E++  M+     PD   +N 
Sbjct: 387 VEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNM 446

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+  LC   +   +L + + M   G   N  TY  L++G      +  + E+  +++L+ 
Sbjct: 447 LIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQG 506

Query: 548 VVSES 552
           V   S
Sbjct: 507 VSRNS 511


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 236/472 (50%), Gaps = 1/472 (0%)

Query: 94  HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           H P +++   +L  L K  +   AI + + M   GI  +  +   L+NC C  G + ++ 
Sbjct: 6   HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            ++ K+   GY  +T+T N+L++GLC+ G + +SL F D+++ +G   +  +Y  LL   
Sbjct: 66  SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGL 125

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K      A+KLL  I  +  +PN+V YN ++ GLCK+    EA   + ++ ++G  P+ 
Sbjct: 126 CKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA 185

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           ++Y  L+   C+ G+   A  LL EM   + +P +  YNILI +L   G    A  +L  
Sbjct: 186 ITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAV 245

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
           M K   +P   +Y+ ++   C  G+V    +    M      PN  +YN +   LC   +
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           V EA  +++ + +K        Y  +I  LC+ G+   A  L+ EM   G   D  TY+S
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+  LC    +++A  +F+ M+E   +P +  + AL+ GLCK  R   + E+FQ ++ KG
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
              +  TYT+++ G+  +   + +  +  +++    +  +    ++++  FE
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFE 477



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 214/432 (49%), Gaps = 1/432 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +F  L +++  G++PD +    L+  LC   ++KK++   + +V+ G   D  SY  L+N
Sbjct: 64  SFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLN 123

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G    A++L+  +ED     N V YN+++ GLC    +N++      +  +G+ P
Sbjct: 124 GLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +A TY+ L+        +  A  LLD++I K   P +  YN+L+  LCKEG  +EA    
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G +P VV+Y+ L+   C+ G  + A ++   M     +P + +YNI+I  L   
Sbjct: 244 AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKC 303

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D A+ +L EM+     P   +YN +I  LC  G++   +  +++M HR    +  TY
Sbjct: 304 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 363

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L   LC    + +A A+   +  +        Y  +I  LC+ G+   A +L   +  
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV 423

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G   D +TY+ +I GLC EG+ +EAL I   ME+    P+   F  ++  L +    D 
Sbjct: 424 KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDK 483

Query: 501 SLEVFQMMIEKG 512
           + ++   MI KG
Sbjct: 484 AEKLLHEMIAKG 495



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 160/323 (49%), Gaps = 1/323 (0%)

Query: 60  TKPNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI 118
           T+PN    N   D   +D  +N+A+     M ++G  PD +  T L+Y  C   ++  A 
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAF 205

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
            +++ M+   I P    Y  L+N LCK+GNV  A  L+  M   G     VTY++L+ G 
Sbjct: 206 SLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY 265

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C++G +  + Q    ++Q G+ PN ++Y+ ++    K + V  AM LL +++ K   P+ 
Sbjct: 266 CLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 325

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+YN L+ GLCK GR   A+    ++  +G   +VV+Y  LL +LC     ++A  L  +
Sbjct: 326 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      PT+ TY  LI  L   G+  +A ++   ++         +Y  +I+ LC EG 
Sbjct: 386 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGM 445

Query: 359 VDLVVKCLDQMFHRRCKPNEGTY 381
            D  +    +M    C PN  T+
Sbjct: 446 FDEALAIKSKMEDNGCIPNAVTF 468



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 4/222 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A   L  M+ K   PD V   +L+  LCK+ ++  A+ +M  M   G   D  +YT
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK  N+  A  L  KM++ G      TY +L+ GLC  G L  + +    L+ K
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   + +TY+ ++    KE     A+ +   +   G  PN V++ +++  L ++   ++A
Sbjct: 425 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 484

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            +   ++ +KG    ++  +  +  + ++   ++A +LL EM
Sbjct: 485 EKLLHEMIAKG----LLVLDFKVADVFVQNENDKAEKLLHEM 522



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 4/163 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L+ A     +M  +G +P +   T L+  LCK  ++K A ++ + ++  G  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +YT +++ LCK+G    A+ +  KMED G   N VT+  ++R L      +++ + 
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 487

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L  +I KGL+       F +   + +     A KLL ++IAKG
Sbjct: 488 LHEMIAKGLL----VLDFKVADVFVQNENDKAEKLLHEMIAKG 526


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 218/460 (47%), Gaps = 3/460 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD K   A     +M++ G  P  V    L+  LC   + + A  + + M+S G +P   
Sbjct: 354 RDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++ C C  G++  AM + +KM   G   N +TYN+L+ G C  GNLN +++ L+ +
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GL P+A+TY+ L+    +   +  A  L   ++  G  PN V+Y  ++ G     + 
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F  +   G  P+  +YN+++          EA     +M      P ++TY   
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD--LVVKCLDQMFHR 372
           I  L  +G+T  A K+  EM K  + P+  +Y+ +I  LC EG+ +   +   L ++ H 
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C+PN  TY  L   LCG G+  EA  ++ S+  K     +E Y+ ++   C+  K   A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             + Y M   GF      Y +LI  LC E  IEEA  IF  M E  +  D   +  LL G
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDG 773

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           L K   TDL L++  +M  +    N  TY +L   ++  D
Sbjct: 774 LLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALD 813



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 217/457 (47%), Gaps = 7/457 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+H L+ AF   +RMV  G  P+ V  + L+  LC   ++++A+ ++E MV  GI P   
Sbjct: 249 RNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVY 308

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  +  LC  G    A++L+ KM+  G   N  T+ +L+ GL   G    ++    ++
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GLVP   TY+ L+     E     A  +   +++ G  P+  +YN ++   C  G  
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F  +   G  PNV++YN L+   C +G    A  LL  M G    P   TY  L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  GK +HA  +   M++    P+  +Y  II    +  KVD  +    +M     
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN--KQNSSPQEF-YKYVITSLCRKGKTYQA 431
            P+  TYN   M+ G  K           G   KQ   P    Y   I  LCR G+T  A
Sbjct: 549 LPSSQTYN--VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLA 606

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA--LEIFVVMEEYDYKPDVDNFNALL 489
           F++ +EM K  + P+ YTYSSLI GLC EG  E+A    +   +  Y  +P+VD +  L+
Sbjct: 607 FKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            GLC   R   + ++   M +KG  P+E  Y  L+ G
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 232/464 (50%), Gaps = 3/464 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M  +G  P++   T L+  L +  K + AI +   M++ G++P   +Y  L+N LC 
Sbjct: 330 LGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCV 389

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G    A  + + M  +G   +T TYN +++  C++G++ +++   D++++ G  PN  T
Sbjct: 390 EGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVIT 449

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K+  ++ AM+LL+ +   G KP+  +Y  L++G  + G+ E A   F  + 
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMM 509

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PN V+Y  ++       + ++A  L  +M      P+  TYN++I   +      
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A     +MVK    P+  +Y   I  LC  G+  L  K   +M  R   PN  TY+ L 
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629

Query: 386 M-LCGVGKVQEA--FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
             LC  G+ ++A  + ++  L +       + Y  ++  LC +G+ Y+A QL+  M K G
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             P    Y +L+ G C    +E AL IF  M+   ++  + ++ AL+  LCK    + + 
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQ 749

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +FQ M+EK    +E  +T+L++G+  + E +L  ++L  ++ R
Sbjct: 750 CIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESR 793



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 224/448 (50%), Gaps = 1/448 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M++ G +P ++    ++  LCK  ++++A  +M  +      P+A +YT L+   C+  
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N+  A  + ++M   G   N+VTY++L+ GLC  G L +++  L+ ++QKG+ P  +TY+
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             L +         A++LL  +  +G  PN+ ++  L++GL ++G+ E AI  +  + + 
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P  V+YN L+  LC+EGR+E A  +   M      P+  TYN +I      G    A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
           + + D+M+K    P+  +YN +I   C +G ++  ++ L+ M     KP+  TY  L + 
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
               GK++ A ++   +     S     Y  +I       K   A  L ++M + G  P 
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           S TY+ +I G      I EA      M +    P+V  + + + GLC++ RT L+ ++F 
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFH 611

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELE 534
            M ++   PN  TY+ L+ G+  +   E
Sbjct: 612 EMEKRNYFPNLYTYSSLIYGLCQEGRAE 639



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 213/446 (47%), Gaps = 1/446 (0%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           T LL  L K + +  A  +   M++SGI P   ++  ++N LCKKG V  A  ++  +  
Sbjct: 171 TTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFR 230

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           Y    N  TY SL+ G C   NL+ +    DR+++ G  PN+ TYS L+     E  +  
Sbjct: 231 YDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEE 290

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           AM +L++++ KG +P + +Y + L  LC  G + EA+     +  +G  PN+ ++  L+ 
Sbjct: 291 AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALIS 350

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            L  +G++E A  L  +M      PT VTYN LI  L   G+ + A  +   M+     P
Sbjct: 351 GLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP 410

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
           S  +YN II   C  G +   +   D+M      PN  TYN L    C  G +  A  ++
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + +           Y  +I+   R GK   A  L Y M ++G +P+  TY+++I G    
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
             +++AL +F  M E    P    +N ++ G  K+     +      M+++G +PN  TY
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 521 TILVEGIAHQDELELSAEVLKELQLR 546
           T  ++G+       L+ ++  E++ R
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKR 616



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 200/401 (49%), Gaps = 3/401 (0%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+T L+  L K   V  A  +  KM + G   + +T+N+++  LC  G + ++   +  +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +    PNAFTY+ L+    +   +  A  + D ++  G  PN V+Y+ L+ GLC EGR 
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+    ++  KG EP V +Y I L SLC  G   EA ELL +M      P I T+  L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L+  GK + A+ +  +M+     P+  +YN +I +LC EG+ +        M     
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            P+  TYN  +   C +G +Q+A  I   +  K  SSP    Y  +I   C++G    A 
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKML-KAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +LL  M   G  PD++TY+ LI G    G +E A  +F  M E+   P+   + A++ G 
Sbjct: 468 RLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
               + D +L +F  M+E G +P+  TY +++ G +  + +
Sbjct: 528 FNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 212/459 (46%), Gaps = 25/459 (5%)

Query: 75  RDHKLNDAFLQLERMVS--KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           + HK  D+ L+    +S  K  K D+    ++L  L +      A  V  +M+ S     
Sbjct: 86  QTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKS----- 140

Query: 133 ASSYTYLVNCLCK-KGNVGYAMQLVEKME---DYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
                      C+ +G V    Q + ++    D+GY     ++ +L+  L     ++ + 
Sbjct: 141 -----------CRNEGEVKRVTQFLSEINSKYDFGY--TLCSFTTLLIQLGKFDMVDLAR 187

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
               +++  G+ P+  T++ ++    K+  V  A  ++  I      PN  +Y  L+ G 
Sbjct: 188 DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH 247

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C+    + A   F  +   G +PN V+Y+ L+  LC EGR EEA ++L EM      PT+
Sbjct: 248 CRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTV 307

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            TY I + SL   G +  A+++L +M K    P+  ++  +I+ L  +GK ++ +    +
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M      P   TYN L   LC  G+ + AF I + + +  +    + Y  +I   C  G 
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A  +  +M K G +P+  TY++LI G C +G +  A+ +  +M+    KPD   +  
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L+ G  +  + + +  +F  M+E G  PN  TYT +++G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 72/135 (53%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  +I  LC+KG+  +A  ++  + +Y   P+++TY+SLI G C    ++ A  +F  M 
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +    P+   ++ L+ GLC   R + ++++ + M++KG  P   TYTI +  +       
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 535 LSAEVLKELQLRQVV 549
            + E+L +++ R  V
Sbjct: 325 EAVELLGKMKKRGCV 339



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 410 SPQEFYKYVITSLCR-KGKTYQAFQLLYEM-TKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
           +P +  + ++   CR +G+  +  Q L E+ +KY F     ++++L+  L    +++ A 
Sbjct: 128 APADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLAR 187

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++++ M     +P +  FN ++  LCK  R   +  +   +      PN  TYT L+ G 
Sbjct: 188 DMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGH 247

Query: 528 AHQDELELS 536
                L+L+
Sbjct: 248 CRNHNLDLA 256


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 240/460 (52%), Gaps = 4/460 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M+ +   PDV    N+L+ LC+   + ++  ++  ++  G+  +  +    +  LC+
Sbjct: 199 FDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCE 258

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A+ LVE+M  Y  P + VTYN+L+RGLC    + ++ Q+L R++ +G +P+ FT
Sbjct: 259 DGRLEEAVALVERMGAYVAP-DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFT 317

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++   K   +  A +LL D + KG  P+ V+Y  L+ GLC EG  E A+  F +  
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK-T 324
           +K  +P++V YN L++ LC +G    A +++ EM      P I TYNI+I  L   G  +
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNIS 437

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG- 383
           D A+ + D +VKG + P   ++N +I   C   K+D  ++ +++M+     P+  TYN  
Sbjct: 438 DAAVVMNDAIVKG-YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L  LC  GK +E     + +  K        Y  +I + C+  +  +A  ++  M + G 
Sbjct: 497 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD+ ++++LI G C  G ++ A  +F  ++E  Y    D FN L+          ++ +
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +F  MI KG  P+  TY ILV+G+     ++ +   L E+
Sbjct: 617 IFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEM 656



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 225/467 (48%), Gaps = 2/467 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L  A    ERM      P       ++  L  A    +A KV   M+++G+ PDA 
Sbjct: 83  RAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDAR 142

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T  +   C  G    A++L+  + + G       Y ++VRGL   G+   +    D +
Sbjct: 143 THTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEM 202

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + + + P+  T++ +L A  ++  V  +  LL  ++ +G   N  + N+ + GLC++GR 
Sbjct: 203 LGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRL 262

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+     + +    P+VV+YN L+R LC + + +EA + L  M      P   TYN +
Sbjct: 263 EEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTI 321

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G    A ++L + V   F P   +Y  +I  LC+EG ++  ++  ++   +  
Sbjct: 322 IDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDL 381

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+   YN L   LC  G +  A  ++  +  +        Y  +I  LC+ G    A  
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV 441

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           ++ +    G+ PD +T+++LI G C    ++ AL++   M  Y   PDV  +N++L GLC
Sbjct: 442 VMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLC 501

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           K+ +     E F+ MI KG  PN  TY IL+E     ++LE ++ V+
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 548



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 243/485 (50%), Gaps = 10/485 (2%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D +L +A   +ERM +    PDVV    L+  LCK +K+++A + +  M++ G IPD  +
Sbjct: 259 DGRLEEAVALVERMGAYV-APDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFT 317

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +++  CK G +  A +L++     G+  + VTY SL+ GLC  G++ ++L+  +   
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            K L P+   Y+ L++   ++  +  A++++++++ +G  P++ +YN+++ GLCK G   
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNIS 437

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A     D   KG+ P+V ++N L+   C   + + A +L+  M     +P ++TYN ++
Sbjct: 438 DAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   GK     +  +EM+    RP+A +YN +I   C   +++     + +M      
Sbjct: 498 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  ++N L    C  G +  A+ + Q L  K  S+  + +  +I +   K     A ++
Sbjct: 558 PDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 617

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM   G+ PD YTY  L+ GLC    ++ A      M    + P +  F  +L  L  
Sbjct: 618 FGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAM 677

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE--VLKELQLRQVVSES 552
           + R   ++ +  +M+  G +P       +V+ I   D+ E++A   +++EL  +  +S  
Sbjct: 678 NHRVSEAVAIIHIMVRMGVVPE------VVDTILSTDKKEIAAPKILVEELMKKGHISYR 731

Query: 553 AVERL 557
           A E L
Sbjct: 732 AYEVL 736



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 219/491 (44%), Gaps = 35/491 (7%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM++ G  PD    T  L   C   +   A++++  +   G     ++Y  +V  L   G
Sbjct: 131 RMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHG 190

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF--- 204
           +   A  L ++M       +  T+N+++  LC  G++ +S   L +++++G+  N F   
Sbjct: 191 HGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCN 250

Query: 205 -------------------------------TYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
                                          TY+ L+    K+  V  A + L  ++ +G
Sbjct: 251 IWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQG 310

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             P+  +YN ++ G CK G  +EA    +D   KGF P+ V+Y  L+  LC EG  E A 
Sbjct: 311 CIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERAL 370

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           EL  E    D  P +V YN L+  L   G   HAL+V++EMV+    P   +YN II  L
Sbjct: 371 ELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGL 430

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C  G +      ++    +   P+  T+N L    C   K+  A  +++ +     +   
Sbjct: 431 CKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDV 490

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  V+  LC+ GK  +  +   EM   G  P++ TY+ LI   C    +EEA  + V 
Sbjct: 491 ITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 550

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M +    PD  +FN L+ G C++   D +  +FQ + EKG      T+ IL+   + +  
Sbjct: 551 MCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 610

Query: 533 LELSAEVLKEL 543
           ++++ ++  E+
Sbjct: 611 MQMAEKIFGEM 621



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 194/418 (46%), Gaps = 37/418 (8%)

Query: 127 SGIIPDASSYTYL--VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
           S + PD+    Y+  +    + G +  A+   E+M+ +  P     YN+++  L      
Sbjct: 63  SHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYH 122

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           +Q+ +   R++  G+ P+A T++  L++       H A++LL  +  +G      +Y  +
Sbjct: 123 DQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTV 182

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + GL   G    A   F ++  +   P+V ++N +L +LC +G   E+  LLA++     
Sbjct: 183 VRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGM 242

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           S    T NI I  L   G+ + A+ +++ M      P   +YN ++  LC + KV    +
Sbjct: 243 SANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQ 301

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
            L +M ++ C P++ TYN                                   +I   C+
Sbjct: 302 YLGRMMNQGCIPDDFTYNT----------------------------------IIDGYCK 327

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G   +A +LL +    GF PD  TY SLI GLC EG IE ALE+F   +  D KPD+  
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVV 387

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           +N+L+ GLC+      +L+V   M+E+G  P+  TY I++ G+     +  +A V+ +
Sbjct: 388 YNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMND 445


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 262/559 (46%), Gaps = 78/559 (13%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L+ A L L+ M      PD+V  T ++  LC+  ++ +A  V+E  V +G  PD  +Y 
Sbjct: 24  QLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYN 80

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             ++ LCK   V  A QL++KM++      TVTY +LV GL   G L++++  L+++++K
Sbjct: 81  VFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEK 140

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   TY+ +++   K   V  A ++  D++  G +P+   Y  L++GL K G+ +EA
Sbjct: 141 GNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEA 200

Query: 258 IRFFRDLP----SKGFEPNVVSYNILLRSLCMEGRWEEA------------------NEL 295
           + +   +     ++G EP+VV +N+++R LC  G  E+A                  N L
Sbjct: 201 LVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPL 260

Query: 296 LAEMDGGDRS----------------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +A +   +R+                PT+ TY  L+      G+ D AL  L E V+  F
Sbjct: 261 VAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGF 320

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-------------- 385
            P A +Y  II  LC  G+V+   +   +M +R  +P+  TY  L               
Sbjct: 321 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 380

Query: 386 ----------------------MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
                                  LC  G+V EA+A   ++  +   +    Y  ++   C
Sbjct: 381 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 440

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            +G    A +L   M   G  P+  +Y+ +IRGLC  G + +A   F  + +    PDV 
Sbjct: 441 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 500

Query: 484 NFNALLLGLCKSRRT-DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            FN+ L GLC+   T    +E+F+ M+ +G  PN  +Y+IL++GI     LE++ E+  E
Sbjct: 501 TFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHE 560

Query: 543 LQLRQVVSESAVERLVMQY 561
           +  R V  +  V   ++++
Sbjct: 561 MVSRGVAPDVVVFNTLIRW 579



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 229/476 (48%), Gaps = 7/476 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L++A   LE+MV KG+ P +   T ++  L KA ++++A ++   M+ +G  PDA  YT
Sbjct: 126 RLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 185

Query: 138 YLVNCLCKKGNVGYAM----QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            L++ L K G +  A+    Q+VE     G   + V +N ++R LC  GNL  +L + D 
Sbjct: 186 ALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE 245

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L    L    FT++ L+ A  K      A+  +  +  +   P L +Y  L+ G  K GR
Sbjct: 246 L-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGR 304

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EA+   ++   +GF P+ V+Y  ++  LC  GR EE  E   EM      P  VTY  
Sbjct: 305 LDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 364

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI           A +V  +M++     S  +YN I+  LC  G+V         M  R 
Sbjct: 365 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG 424

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C     TY+ L    C  G V  A  + + + ++        Y  +I  LCR GK  +A+
Sbjct: 425 CVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAY 484

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCME-GLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
               ++ +    PD YT++S + GLC     + + +E+F  M      P++ +++ L+ G
Sbjct: 485 FYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDG 544

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           +C++   +++LE+F  M+ +G  P+   +  L+  +     ++ + EV +EL+ R 
Sbjct: 545 ICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS 600



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 199/401 (49%), Gaps = 9/401 (2%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D    T L+N LCK G +  AM L+++M       + V +  ++ GLC    L+++   L
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           +R ++ G  P+  TY+  ++   K   V  A +LL  +  K   P  V+Y  L+ GL K 
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR +EA+     +  KG  P + +Y +++  L   GR EEA  +  +M G    P    Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 312 NILIGSLAYHGKTDHALKVLDEMVK-GRFR---PSAASYNPIIARLCSEGKVDLVVKCLD 367
             LI  LA  GK D AL  L++MV+ G  R   P    +N +I +LC+ G ++  +   D
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFD 244

Query: 368 QMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           ++          T+N L A LC   + +EA A ++ +  ++       Y  ++    + G
Sbjct: 245 EL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLG 303

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A   L E  + GF PD+ TY+S+I GLC  G +EE  E F  M    Y+PD   + 
Sbjct: 304 RLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 363

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           AL+ G  K++    +  V++ M++ G + +  TY I+++G+
Sbjct: 364 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 404



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 194/420 (46%), Gaps = 36/420 (8%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+  LCKA + ++AI  ++ M      P   +YT LV+   K G +  A+  +++  + G
Sbjct: 260 LVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERG 319

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           +  + VTY S++ GLC LG + +  +    +  +G  P+A TY+ L++   K + +  A 
Sbjct: 320 FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAH 379

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           ++   ++  G   + V+YN++L GLCK GR  EA   F  +  +G    VV+Y+ L+   
Sbjct: 380 RVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF 439

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C EG    A EL   M      P +V+YNI+I  L   GK   A    +++++ R  P  
Sbjct: 440 CSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDV 499

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
            ++N  +  LC           LD                      VG   E F  + S 
Sbjct: 500 YTFNSFLHGLCQR---------LDT---------------------VGDGVELFESMVSQ 529

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
           G   N      Y  ++  +CR G      ++ +EM   G  PD   +++LIR LC+ G +
Sbjct: 530 GTSPNLHS---YSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRV 586

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS-LEVFQMMIEKGQMPNETTYTI 522
           +EALE+F  +E     PD  ++ +LL  L +  R + + L  F M ++ G  P     T+
Sbjct: 587 DEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQ-GCAPRHYDLTV 644



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 194/391 (49%), Gaps = 10/391 (2%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            +T    +L+ GLC  G L++++  LD +      P+   ++ ++    +E+ +  A  +
Sbjct: 7   VDTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSV 63

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           L+  +  G +P+ V+YNV + GLCK  R ++A +  + +  K   P  V+Y  L+  L  
Sbjct: 64  LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 123

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            GR +EA  +L +M     SPT+ TY ++I  L+  G+ + A ++  +M+    RP A  
Sbjct: 124 AGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 183

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRC----KPNEGTYN-GLAMLCGVGKVQEAFAII 400
           Y  +I+ L   GK+D  +  L+QM    C    +P+   +N  +  LC  G +++A A  
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYF 243

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             L +  + +   F   ++ +LC+  +T +A   + +M++    P  +TY+SL+ G    
Sbjct: 244 DELDDSLDLTHFTFNP-LVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G ++EAL       E  + PD   + +++ GLCK  R +   E F  M  +G  P+  TY
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362

Query: 521 TILVEGIAHQDELELSAEVLKE-LQLRQVVS 550
             L++G      +  +  V ++ LQ   VVS
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVS 393



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 159/308 (51%), Gaps = 2/308 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L++A LQL+  V +G  PD V  T+++  LCK  ++++  +    M + G  PDA +Y 
Sbjct: 304 RLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 363

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++   K   +  A ++  +M   G   +TVTYN ++ GLC  G + ++      + ++
Sbjct: 364 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEER 423

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G V    TYS L++    E  V AA++L   ++ +G +PNLVSYN+++ GLC+ G+  +A
Sbjct: 424 GCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKA 483

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCME-GRWEEANELLAEMDGGDRSPTIVTYNILIG 316
             +F  L  +   P+V ++N  L  LC       +  EL   M     SP + +Y+IL+ 
Sbjct: 484 YFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMD 543

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            +   G  +  L++  EMV     P    +N +I  LC  G+VD  ++   ++  RR  P
Sbjct: 544 GICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAP 602

Query: 377 NEGTYNGL 384
           +  +Y  L
Sbjct: 603 DAWSYWSL 610


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 232/466 (49%), Gaps = 5/466 (1%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+++    +L   CK   M  A      ++     PD  +YT LV   C+  +V  A  +
Sbjct: 187 PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGV 246

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
              M       N V+Y +L+ GLC  G L+++L+F  R+ + G  P   TY+ L+ A  +
Sbjct: 247 FCVMPR----RNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCE 302

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                 A+ L  ++  +G +PN+ +Y VL+  LCKEGR +EA++   ++  KG  P+VV 
Sbjct: 303 SGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVP 362

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +N L+ S C  G  E+A  +L  M+     P + TYN LI         D A+ +L++MV
Sbjct: 363 FNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMV 422

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
           + +  P   +YN +I  LC  G VD   +    M      P++ T+N  +  LC +G+V 
Sbjct: 423 ESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVG 482

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  I++SL  K   + +  Y  +I   C+ GK   A  L   M      P+S T++ +I
Sbjct: 483 EAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMI 542

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GL  EG +++A+ +   M ++D KP +  +N L+  + K    D + E+   +I  G  
Sbjct: 543 DGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ 602

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           PN  TYT  ++    Q  LE + E++ +++   V+ +S +  L++ 
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLIN 648



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 220/481 (45%), Gaps = 30/481 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++ A   L +MV     PDVV    L++ LC+   +  A ++  +M+  G  PD  
Sbjct: 407 RGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQW 466

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++   + CLC+ G VG A Q++E +++     N   Y +L+ G C  G +  +     R+
Sbjct: 467 TFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM 526

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +  +PN+ T++ +++   KE  V  AM L++D+     KP L +YN+L+  + KE   
Sbjct: 527 LAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDF 586

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A      L S G++PNVV+Y   +++ C +GR EEA E++ ++           YN+L
Sbjct: 587 DRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLL 646

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE------------------ 356
           I +    G  D A  VL  M      PS  +Y+ ++  L  E                  
Sbjct: 647 INAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTN 706

Query: 357 ---------GKVDLVVKCL--DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
                     K+D  +  +  ++M    C PN  TY+ L   LC VG++  AF++   + 
Sbjct: 707 ISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMR 766

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
               S  +  +  +++S C+ G   +A  LL  M +        +Y  LI GL  +   E
Sbjct: 767 EGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKE 826

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A  +F  +    Y  D   +  L+ GL K+   D   E+  +M + G   +  TY++L+
Sbjct: 827 KAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886

Query: 525 E 525
           +
Sbjct: 887 Q 887



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 245/535 (45%), Gaps = 65/535 (12%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++++A   L  MV KG  P VV    L+   CK   M+ A+ V+ +M S  + P+  
Sbjct: 337 KEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVR 396

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   C+  ++  AM L+ KM +     + VTYN+L+ GLC +G ++ + +    +
Sbjct: 397 TYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLM 456

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ G  P+ +T++  +    +   V  A ++L+ +  K  K N  +Y  L+ G CK G+ 
Sbjct: 457 IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKI 516

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A   F+ + ++   PN +++N+++  L  EG+ ++A  L+ +M   D  PT+ TYNIL
Sbjct: 517 EHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNIL 576

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVK------ 364
           +  +      D A ++L+ ++   ++P+  +Y   I   CS+G++    ++V+K      
Sbjct: 577 VEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGV 636

Query: 365 -------------------------CLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEA--- 396
                                     L +MF   C+P+  TY+ L     + K ++    
Sbjct: 637 LLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSN 696

Query: 397 -----------------------FAIIQSLGNKQNSS---PQ-EFYKYVITSLCRKGKTY 429
                                  F I   L  K       P    Y  +I  LC+ G+  
Sbjct: 697 PVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLN 756

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF L + M + G +P    ++SL+   C  G+  EA+ +   M E  +   ++++  L+
Sbjct: 757 VAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLI 816

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            GL +    + +  VF  ++  G   +E  + +L++G+A    ++  +E+L  ++
Sbjct: 817 CGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLME 871



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 214/444 (48%), Gaps = 8/444 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           + + V  TNL++ LC+A K+ +A++    M   G  P   +YT LV  LC+ G    A+ 
Sbjct: 252 RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALS 311

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L  +M + G   N  TY  L+  LC  G ++++L+ L+ +++KG+ P+   ++ L+ +  
Sbjct: 312 LFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYC 371

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K   +  A+ +L  + +K   PN+ +YN L+ G C+    + A+     +      P+VV
Sbjct: 372 KRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV 431

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YN L+  LC  G  + A+ L   M     SP   T+N  +  L   G+   A ++L+ +
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---G 391
            +   + +  +Y  +I   C  GK++       +M    C PN  T+N   M+ G+   G
Sbjct: 492 KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN--VMIDGLRKEG 549

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           KVQ+A  +++ +           Y  ++  + ++    +A ++L  +   G+ P+  TY+
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYT 609

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           + I+  C +G +EEA E+ + ++      D   +N L+         D +  V + M   
Sbjct: 610 AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT 669

Query: 512 GQMPNETTYTILVEGIA---HQDE 532
           G  P+  TY+IL++ +    H+ E
Sbjct: 670 GCEPSYLTYSILMKHLVIEKHKKE 693



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 214/466 (45%), Gaps = 30/466 (6%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  +G +P+V   T L+  LCK  +M +A+K++  MV  G+ P    +  L+   CK+G 
Sbjct: 316 MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGM 375

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+ ++  ME      N  TYN L+ G C   ++++++  L+++++  L P+  TY+ 
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNT 435

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    +   V +A +L   +I  G  P+  ++N  +  LC+ GR  EA +    L  K 
Sbjct: 436 LIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKH 495

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + N  +Y  L+   C  G+ E A  L   M   +  P  +T+N++I  L   GK   A+
Sbjct: 496 VKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAM 555

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAML 387
            ++++M K   +P+  +YN ++  +  E   D   + L+++     +PN  TY   +   
Sbjct: 556 LLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAY 615

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G+++EA  ++  + N+        Y  +I +    G    AF +L  M   G  P  
Sbjct: 616 CSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSY 675

Query: 448 YTYSSLIRGLCMEGLIEEALE-----------------------------IFVVMEEYDY 478
            TYS L++ L +E   +E                                +F  M E   
Sbjct: 676 LTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGC 735

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            P+++ ++ L+ GLCK  R +++  ++  M E G  P+E  +  L+
Sbjct: 736 VPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLL 781



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 150/343 (43%), Gaps = 29/343 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ DA L +E M     KP +     L+ ++ K     +A +++  ++SSG  
Sbjct: 543 DGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ 602

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT  +   C +G +  A ++V K+++ G   ++  YN L+     +G L+ +   
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGV 662

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKER---------GVHAAMKLLD----DIIAK----- 232
           L R+   G  P+  TYS L++    E+         G+  ++  +     DI +K     
Sbjct: 663 LRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGI 722

Query: 233 -----------GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
                      G  PNL +Y+ L+ GLCK GR   A   +  +   G  P+ + +N LL 
Sbjct: 723 TTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLS 782

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           S C  G + EA  LL  M        + +Y +LI  L      + A  V   +++  +  
Sbjct: 783 SCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNY 842

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
              ++  +I  L   G VD   + L+ M    C+ +  TY+ L
Sbjct: 843 DEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSML 885



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 6/240 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ AF  L RM   G +P  +  + L+  L      K+    + + VS   I   ++  +
Sbjct: 656 LDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIW 715

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
                  K + G    L EKM + G   N  TY+ L+ GLC +G LN +      + + G
Sbjct: 716 ------SKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGG 769

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+   ++ LL +  K      A+ LLD ++      +L SY +L+ GL ++   E+A 
Sbjct: 770 ISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAE 829

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  L   G+  + V++ +L+  L   G  ++ +ELL  M+         TY++L+  L
Sbjct: 830 AVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 238/491 (48%), Gaps = 33/491 (6%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++ A   L  M   G  P+ V    L++ L K N++ +A++++E M   G +PDA ++
Sbjct: 225 NEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 284

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL----- 191
             ++  LCK   +  A ++V +M   G+  + +TY  L+ GLC +G ++ +         
Sbjct: 285 NDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 344

Query: 192 ---------------------------DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
                                      D +   G+VP+  TY+ L+   +K+  V  A++
Sbjct: 345 PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALE 404

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +L D+  KG KPN+ SY +L+ G CK G+ +EA     ++ + G +PN V +N L+ + C
Sbjct: 405 VLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFC 464

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
            E R  EA E+  EM      P + T+N LI  L    +  HAL +L +M+      +  
Sbjct: 465 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 524

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSL 403
           +YN +I      G++    K +++M  +    +E TYN L   LC  G+V +A ++ + +
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                         +I  LCR G   +A +   EM   G TPD  T++SLI GLC  G I
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           E+ L +F  ++     PD   +N L+  LCK      +  +    IE G +PN+ T++IL
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704

Query: 524 VEGIAHQDELE 534
           ++ +  Q+ L+
Sbjct: 705 LQSLVPQETLD 715



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 240/479 (50%), Gaps = 6/479 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+S+   P +     ++  LC  N++  A+ V+  M   G +P++  Y  L++ L K   
Sbjct: 202 MLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNR 261

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A+QL+E+M   G   +  T+N ++ GLC    +N++ + ++R++ +G  P+  TY +
Sbjct: 262 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGY 321

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSK 267
           L+    K   V AA     D+  +  KP  V +N L+ G    GR ++A     D+  S 
Sbjct: 322 LMNGLCKIGRVDAA----KDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 377

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+V +YN L+     +G    A E+L +M      P + +Y IL+      GK D A
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
             +L+EM     +P+   +N +I+  C E ++   V+   +M  + CKP+  T+N L + 
Sbjct: 438 YNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 497

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC V +++ A  +++ + ++   +    Y  +I +  R+G+  +A +L+ EM   G   D
Sbjct: 498 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+SLI+GLC  G +++A  +F  M      P   + N L+ GLC+S   + ++E  +
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQK 617

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
            M+ +G  P+  T+  L+ G+     +E    + ++LQ   +  ++     +M +  +G
Sbjct: 618 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKG 676



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 189/414 (45%), Gaps = 39/414 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   SY  ++  L        A  +   M     P    T+  +++ LC +  ++ +L  
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSV 233

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + + G VPN+  Y  L+ +  K   V+ A++LL+++   G  P+  ++N ++ GLCK
Sbjct: 234 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 293

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R  EA +    +  +GF P+ ++Y  L+  LC  GR + A +L   +      PT V 
Sbjct: 294 FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVI 349

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +N LI     HG+ D A  VL +MV      P   +YN +I     +G V L ++ L  M
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            ++ CKPN  +Y  L                                  +   C+ GK  
Sbjct: 410 RNKGCKPNVYSYTIL----------------------------------VDGFCKLGKID 435

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A+ LL EM+  G  P++  ++ LI   C E  I EA+EIF  M     KPDV  FN+L+
Sbjct: 436 EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 495

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            GLC+      +L + + MI +G + N  TY  L+     + E++ + +++ E+
Sbjct: 496 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 549



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 142/245 (57%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++H++ +A      M  KG KPDV    +L+  LC+ +++K A+ ++  M+S G++ +  
Sbjct: 465 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 524

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N   ++G +  A +LV +M   G   + +TYNSL++GLC  G ++++    +++
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ GLVP++ + + L+    +   V  A++   +++ +G  P++V++N L+ GLC+ GR 
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+ +  FR L ++G  P+ V+YN L+  LC  G   +A  LL E       P   T++IL
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704

Query: 315 IGSLA 319
           + SL 
Sbjct: 705 LQSLV 709



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/217 (19%), Positives = 95/217 (43%), Gaps = 16/217 (7%)

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-------G 391
           +R S   Y  +I +L S G+   + + L QM       +EG     ++   +       G
Sbjct: 101 YRHSFDVYQVLIGKLGSNGEFKTIDRLLMQM------KDEGIVFKESLFISIMRDYDKAG 154

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKY-VITSLCRKGKTYQ-AFQLLYEMTKYGFTPDSYT 449
              +   ++  + N  +  P  F  Y V+  +   G  ++ A  + Y+M      P  +T
Sbjct: 155 FPGQTTRLMLEMRNVYSCEPT-FKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 213

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           +  +++ LC    ++ AL +   M ++   P+   +  L+  L K  R + +L++ + M 
Sbjct: 214 FGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 273

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             G +P+  T+  ++ G+   D +  +A+++  + +R
Sbjct: 274 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 310



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%)

Query: 424 RKGKTYQAFQLLYEMTK-YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           + G   Q  +L+ EM   Y   P   +Y+ ++  L      + A  +F  M      P +
Sbjct: 152 KAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTL 211

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             F  ++  LC     D +L V + M + G +PN   Y  L+  ++  + +  + ++L+E
Sbjct: 212 FTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 271

Query: 543 LQLRQVVSES 552
           + L   V ++
Sbjct: 272 MFLMGCVPDA 281


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 229/477 (48%), Gaps = 17/477 (3%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           TR RD KLNDA      MV     P +V    LL  + K  K    I + + M   GI  
Sbjct: 59  TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  ++  ++NC C    V  A+ ++ KM   GY  + VT  SLV G C    ++ ++  +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           D++++ G  P+   Y+ ++++  K + V+ A     +I  KG +PN+V+Y  L+ GLC  
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            R  +A R   D+  K   PNV++Y+ LL +    G+  EA EL  EM      P IVTY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           + LI  L  H + D A ++ D MV         SYN +I   C   +V+  +K   +M  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 372 RRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKG 426
           R    N  TYN    G      V K QE F+ +   G     SP  + Y  ++  LC  G
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG----ISPDIWTYNILLGGLCDNG 414

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  +  +M K     D  TY+++IRG+C  G +EEA  +F  +     KPD+  + 
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            ++ GLC          ++  M ++G M N+ T   L +G     ++ LSAE++K++
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT---LSDG-----DITLSAELIKKM 523



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 205/434 (47%), Gaps = 34/434 (7%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K+  AI +   MV S   P    +  L++ + K       + L +KME  G   +  T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            ++   C    ++ +L  L ++++ G  P+  T   L+    +   V  A+ L+D ++  
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KP++V+YN ++  LCK  R  +A  FF+++  KG  PNVV+Y  L+  LC   RW +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL++M     +P ++TY+ L+ +   +GK   A ++ +EMV+    P   +Y+ +I  
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           LC   ++D   +  D M  + C  +  +YN L                            
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTL---------------------------- 336

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                 I   C+  +     +L  EM++ G   ++ TY++LI+G    G +++A E F  
Sbjct: 337 ------INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M+ +   PD+  +N LL GLC +   + +L +F+ M ++    +  TYT ++ G+    +
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 533 LELSAEVLKELQLR 546
           +E +  +   L L+
Sbjct: 451 VEEAWSLFCSLSLK 464



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 150/287 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  ++NDAF   + +  KG +P+VV  T L+  LC +++   A +++  M+   I 
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++   K G V  A +L E+M       + VTY+SL+ GLC+   ++++ Q 
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG + +  +Y+ L+    K + V   MKL  ++  +G   N V+YN L+ G  +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A  FF  +   G  P++ +YNILL  LC  G  E+A  +  +M   +    IVT
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           Y  +I  +   GK + A  +   +     +P   +Y  +++ LC++G
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 1/320 (0%)

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           ++ +  +AI  F D+      P++V +N LL ++    +++    L  +M+       + 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+NI+I       +   AL +L +M+K  + P   +   ++   C   +V   V  +D+M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                KP+   YN +   LC   +V +AF   + +  K        Y  ++  LC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A +LL +M K   TP+  TYS+L+      G + EA E+F  M      PD+  +++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + GLC   R D + ++F +M+ KG + +  +Y  L+ G      +E   ++ +E+  R +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 549 VSESAVERLVMQYDFEGIEV 568
           VS +     ++Q  F+  +V
Sbjct: 362 VSNTVTYNTLIQGFFQAGDV 381


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 244/468 (52%), Gaps = 15/468 (3%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +L DA   LE + + G   D V    L+   C+   +  A +V+E   +SG   +  +Y
Sbjct: 133 RRLADAERVLEALKTSGAA-DAVSHNTLVAGYCRDGSLWDAERVLEAARASGA-ANVVTY 190

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L++  C+ G +  A++L+  M       +T TYN++++GLC      ++ + +  +I+
Sbjct: 191 TALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQWEEAEELMREMIR 247

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
               PN  T++  + A  +   +  A++LL+ +   G  P++V Y+ L+ G  + GR ++
Sbjct: 248 NNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDD 307

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++    +  +   PN V YN  L+ LC+ GRW+E  EL+AEM   D  P   T++ LI 
Sbjct: 308 ALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLIN 364

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           SL  +   ++A++VL++M K  + P   SYN II+    +   D  +K L+ M    CKP
Sbjct: 365 SLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKP 421

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  ++N  L  LC   +  +A  ++  +  +   + +  +  +I SLC+ G+   A ++ 
Sbjct: 422 DTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMF 481

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M KY  TPD  TYSSLI G   +GL + A ++F  M     + D+ ++NA L GLC +
Sbjct: 482 ELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLCMA 538

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            R D + E+   M+ K  +PNE T+ IL+  +  +  +  + EV +++
Sbjct: 539 ARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQM 586



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 230/436 (52%), Gaps = 13/436 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  M+     P+ V     +   C+   + +A++++E M   G +PD   Y+ LVN   +
Sbjct: 242 MREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSE 301

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  A++L+  M     P NTV YN+ ++GLC+ G  ++  + +  +++K   PN  T
Sbjct: 302 HGRVDDALKLLSTM--LCRP-NTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDAT 358

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +S L+ +  + R    A+++L+ +   G  P++VSYN +++   ++   ++A++    + 
Sbjct: 359 FSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML 418

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            K   P+ +S+N +L+ LC   RW +A EL+A+M   D     +T+NILI SL  +G+  
Sbjct: 419 CK---PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVK 475

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A+++ + M K R  P   +Y+ +I    SE  +D V    D      C+ +  +YN  L
Sbjct: 476 DAIEMFELMPKYRCTPDIVTYSSLINGF-SEQGLDKVA--FDLFRSMPCRADIFSYNATL 532

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC   +  +A  +I  +  K     +  +  +I SLC+KG   +A ++  +M KYG T
Sbjct: 533 KGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGIT 592

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD +TY++LI G   +G +++AL+    M     +PD  ++N++L GLC++ R   + ++
Sbjct: 593 PDIFTYNALINGYSEQGCLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKL 649

Query: 505 FQMMIEKGQMPNETTY 520
              M+ K   PNE T+
Sbjct: 650 VTEMLRKNCTPNEVTF 665



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 191/415 (46%), Gaps = 41/415 (9%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P   +T N L++ LC    L  + + L+ L   G   +A +++ L+    ++  +  A +
Sbjct: 116 PPAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAER 174

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +L+   A G   N+V+Y  L+ G C+ GR  +A+R    +P     P+  +YN +L+ LC
Sbjct: 175 VLEAARASGAA-NVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLC 230

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
              +WEEA EL+ EM   +  P  VT+   I +   +G  D A+++L++M K    P   
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVV 290

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSL 403
            Y+ ++      G+VD  +K L  M    C+PN   YN  L  LC  G+  E   +I  +
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEM 347

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI--------- 454
             K        +  +I SLC+      A ++L +M KYG+ PD  +Y+++I         
Sbjct: 348 VRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACA 407

Query: 455 -----------------------RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
                                  + LC      +A E+   M + D   +   FN L+  
Sbjct: 408 DDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDS 467

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           LC++ +   ++E+F++M +    P+  TY+ L+ G + Q   +++ ++ + +  R
Sbjct: 468 LCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCR 522



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 176/335 (52%), Gaps = 12/335 (3%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  MV K   P+    + L+  LC+    + AI+V+E M   G +PD  SY  +++C  +
Sbjct: 344 IAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSE 403

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +     A++L+  M     P +T+++N++++ LC       + + + +++++    N  T
Sbjct: 404 QACADDALKLLNSM--LCKP-DTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMT 460

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+++  +   V  A+++ + +      P++V+Y+ L+ G  ++G  + A   FR +P
Sbjct: 461 FNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP 520

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +    ++ SYN  L+ LCM  RW++A EL+A+M   D  P  VT+NILI SL   G  +
Sbjct: 521 CRA---DIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVN 577

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A++V ++M K    P   +YN +I     +G +D  +K L  M    C+P+  +YN  L
Sbjct: 578 RAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTM---PCEPDTISYNSIL 634

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYV 418
             LC   + ++A  ++  +  K N +P E  +KY 
Sbjct: 635 KGLCRAERWKDAEKLVTEMLRK-NCTPNEVTFKYA 668


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 239/470 (50%), Gaps = 1/470 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K +DA    + M+     P +V  +     + +  +    +   + +  +GI  +  +
Sbjct: 56  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 115

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              ++NC C+     +A  ++ K+   GY  +T T+N+L++GL + G +++++  +DR++
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  TY+ ++    +      A+ LL  +  +  K ++ +Y+ ++  LC++G  +
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            AI  F+++ +KG + +VV+YN L+R LC  G+W +   LL +M   +  P ++T+N+L+
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 GK   A ++  EM+     P+  +YN ++   C + ++      LD M   +C 
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  T+  L    C V +V +   + +++  +   +    Y  ++   C+ GK   A +L
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM  +G  PD  TY  L+ GLC  G +E+ALEIF  +++      +  +  ++ G+CK
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 475

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             + + +  +F  +  KG  PN  TYT+++ G+  +  L  +  +L++++
Sbjct: 476 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 525



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 235/493 (47%), Gaps = 48/493 (9%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+  L +++  G++PD      L+  L    K+ +A+ +++ MV +G  PD  +Y  +VN
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            +C+ G+   A+ L+ KME+     +  TY++++  LC  G ++ ++     +  KG+  
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ L+    K    +    LL D++++   PN++++NVLL    KEG+ +EA   +
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +++ ++G  PN+++YN L+   CM+ R  EAN +L  M     SP IVT+  LI      
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D  +KV   + K     +A +Y+ ++   C  GK+ L  +   +M      P+  TY
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
              L  LC  GK+++A  I + L   +       Y  +I  +C+ GK   A+ L   +  
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P+  TY+ +I GLC +G + EA                   N LL           
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEA-------------------NILL----------- 521

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ----------LRQVVS 550
                + M E G  PN+ TY  L+       +L  SA++++E++          ++ V+ 
Sbjct: 522 -----RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576

Query: 551 E--SAVERLVMQY 561
              SA++RL ++Y
Sbjct: 577 MLLSAMKRLTLRY 589



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 203/413 (49%), Gaps = 36/413 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A + ++RMV  G +PDVV   +++  +C++     A+ ++  M    +  D  +Y+
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC+ G +  A+ L ++ME  G  ++ VTYNSLVRGLC  G  N     L  ++ +
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            +VPN  T++ LL+   KE  +  A +L  ++I +G  PN+++YN L+ G C + R  EA
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 342

Query: 258 -----------------------------------IRFFRDLPSKGFEPNVVSYNILLRS 282
                                              ++ FR++  +G   N V+Y+IL++ 
Sbjct: 343 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 402

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C  G+ + A EL  EM      P ++TY IL+  L  +GK + AL++ +++ K +    
Sbjct: 403 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 462

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQ 401
              Y  II  +C  GKV+        +  +  KPN  TY   ++ LC  G + EA  +++
Sbjct: 463 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 522

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            +    N+     Y  +I +  R G    + +L+ EM   GF+ D+ +   +I
Sbjct: 523 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 162/314 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  RD  ++ A    + M +KG K  VV   +L+  LCKA K      +++ MVS  I+
Sbjct: 226 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 285

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L++   K+G +  A +L ++M   G   N +TYN+L+ G CM   L+++   
Sbjct: 286 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 345

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD +++    P+  T++ L++     + V   MK+  +I  +G   N V+Y++L+ G C+
Sbjct: 346 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 405

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A   F+++ S G  P+V++Y ILL  LC  G+ E+A E+  ++        IV 
Sbjct: 406 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 465

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  +I  +   GK + A  +   +     +P+  +Y  +I+ LC +G +      L +M 
Sbjct: 466 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 525

Query: 371 HRRCKPNEGTYNGL 384
                PN+ TYN L
Sbjct: 526 EDGNAPNDCTYNTL 539



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 149/294 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL +A    + M+++G  P+++    L+   C  N++ +A  ++++MV +   PD  
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L+   C    V   M++   +   G   N VTY+ LV+G C  G +  + +    +
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 419

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G++P+  TY  LL+       +  A+++ +D+        +V Y  ++ G+CK G+ 
Sbjct: 420 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 479

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A   F  LP KG +PNV++Y +++  LC +G   EAN LL +M+    +P   TYN L
Sbjct: 480 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 539

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           I +    G    + K+++EM    F   A+S   +I  L S  K   +  CL +
Sbjct: 540 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSK 593



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 38/230 (16%)

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  EM++ R  PS   ++   + +    + +LV+    Q+            N
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQL----------ELN 107

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY--KYVITSLCRKGKTYQAFQLLYEMTK 440
           G+A                             Y    +I   CR  KT  A+ +L ++ K
Sbjct: 108 GIA--------------------------HNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 141

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G+ PD+ T+++LI+GL +EG + EA+ +   M E   +PDV  +N+++ G+C+S  T L
Sbjct: 142 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 201

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           +L++ + M E+    +  TY+ +++ +     ++ +  + KE++ + + S
Sbjct: 202 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251



 Score = 42.4 bits (98), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           RK     A +L  EM + G  P++ TYSSLI G C E  ++EA ++  +M     K D D
Sbjct: 711 RKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVT---KGDSD 767

Query: 484 NFNALLLGLCKSRR 497
               LL GL + +R
Sbjct: 768 -IRYLLAGLMRKKR 780



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 10/151 (6%)

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKG---NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           ++MV   +  DA  Y +    + + G    V  A +L ++M   G   NT+TY+SL+ G 
Sbjct: 685 DLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGF 744

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG--KP 236
           C    L+++ Q LD ++ KG     +  + L+    K         L DD+         
Sbjct: 745 CKENRLDEANQMLDLMVTKGDSDIRYLLAGLMRKKRKGSETEGWENLPDDLSCSTASRSS 804

Query: 237 NLVSYNVL-----LTGLCKEGRTEEAIRFFR 262
           N  S+  L     L   CKE    E++  F+
Sbjct: 805 NFRSHFSLEGYARLKKRCKETEAVESVGSFK 835


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 239/470 (50%), Gaps = 1/470 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K +DA    + M+     P +V  +     + +  +    +   + +  +GI  +  +
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              ++NC C+     +A  ++ K+   GY  +T T+N+L++GL + G +++++  +DR++
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  TY+ ++    +      A+ LL  +  +  K ++ +Y+ ++  LC++G  +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            AI  F+++ +KG + +VV+YN L+R LC  G+W +   LL +M   +  P ++T+N+L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 GK   A ++  EM+     P+  +YN ++   C + ++      LD M   +C 
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  T+  L    C V +V +   + +++  +   +    Y  ++   C+ GK   A +L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM  +G  PD  TY  L+ GLC  G +E+ALEIF  +++      +  +  ++ G+CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             + + +  +F  +  KG  PN  TYT+++ G+  +  L  +  +L++++
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 237/494 (47%), Gaps = 50/494 (10%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+  L +++  G++PD      L+  L    K+ +A+ +++ MV +G  PD  +Y  +VN
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            +C+ G+   A+ L+ KME+     +  TY++++  LC  G ++ ++     +  KG+  
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ L+    K    +    LL D++++   PN++++NVLL    KEG+ +EA   +
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +++ ++G  PN+++YN L+   CM+ R  EAN +L  M     SP IVT+  LI      
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D  +KV   + K     +A +Y+ ++   C  GK+ L  +   +M      P+  TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 382 NGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
            G+ +  LC  GK+++A  I + L   +       Y  +I  +C+ GK   A+ L   + 
Sbjct: 442 -GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  P+  TY+ +I GLC +G + EA                   N LL          
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEA-------------------NILL---------- 531

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ----------LRQVV 549
                 + M E G  PN+ TY  L+       +L  SA++++E++          ++ V+
Sbjct: 532 ------RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585

Query: 550 SE--SAVERLVMQY 561
               SA++RL ++Y
Sbjct: 586 DMLLSAMKRLTLRY 599



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 203/413 (49%), Gaps = 36/413 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A + ++RMV  G +PDVV   +++  +C++     A+ ++  M    +  D  +Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC+ G +  A+ L ++ME  G  ++ VTYNSLVRGLC  G  N     L  ++ +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            +VPN  T++ LL+   KE  +  A +L  ++I +G  PN+++YN L+ G C + R  EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 258 -----------------------------------IRFFRDLPSKGFEPNVVSYNILLRS 282
                                              ++ FR++  +G   N V+Y+IL++ 
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C  G+ + A EL  EM      P ++TY IL+  L  +GK + AL++ +++ K +    
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQ 401
              Y  II  +C  GKV+        +  +  KPN  TY   ++ LC  G + EA  +++
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            +    N+     Y  +I +  R G    + +L+ EM   GF+ D+ +   +I
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 162/314 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  RD  ++ A    + M +KG K  VV   +L+  LCKA K      +++ MVS  I+
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L++   K+G +  A +L ++M   G   N +TYN+L+ G CM   L+++   
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD +++    P+  T++ L++     + V   MK+  +I  +G   N V+Y++L+ G C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A   F+++ S G  P+V++Y ILL  LC  G+ E+A E+  ++        IV 
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  +I  +   GK + A  +   +     +P+  +Y  +I+ LC +G +      L +M 
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535

Query: 371 HRRCKPNEGTYNGL 384
                PN+ TYN L
Sbjct: 536 EDGNAPNDCTYNTL 549



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 150/298 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + M+++G  P+++    L+   C  N++ +A  ++++MV +   
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++T L+   C    V   M++   +   G   N VTY+ LV+G C  G +  + + 
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  G++P+  TY  LL+       +  A+++ +D+        +V Y  ++ G+CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+A   F  LP KG +PNV++Y +++  LC +G   EAN LL +M+    +P   T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           YN LI +    G    + K+++EM    F   A+S   +I  L S  K   +  CL +
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSK 603



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 38/230 (16%)

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  EM++ R  PS   ++   + +    + +LV+    Q+            N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQL----------ELN 117

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY--KYVITSLCRKGKTYQAFQLLYEMTK 440
           G+A                             Y    +I   CR  KT  A+ +L ++ K
Sbjct: 118 GIA--------------------------HNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 151

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G+ PD+ T+++LI+GL +EG + EA+ +   M E   +PDV  +N+++ G+C+S  T L
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           +L++ + M E+    +  TY+ +++ +     ++ +  + KE++ + + S
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 236/448 (52%), Gaps = 4/448 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA    + M+ +   PDV    N+L+ LC+   + ++  ++  ++  G+  +  +    +
Sbjct: 98  DARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWI 157

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LC+ G +  A+ LVE M+ Y  P + VTYN+L+RGLC    + ++ Q+L R++ +G +
Sbjct: 158 RGLCEGGRLEEAVALVESMDAYIAP-DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCI 216

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ FTY+ +++   K   +  A +LL D I KG  P+ V+Y  L+ GLC EG  E A+  
Sbjct: 217 PDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALEL 276

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F +  +K  +P++V YN L++ LC +G    A +++ EM      P I TYNI+I  L  
Sbjct: 277 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCK 336

Query: 321 HGK-TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
            G  +D A+ + D +VKG + P   ++N +I   C   K+D  ++ +++M+     P+  
Sbjct: 337 MGNISDAAVVMNDAIVKG-YLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAI 395

Query: 380 TYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TYN  L  LC  GK +E     + +  K        Y  +I + C+  +  +A  ++  M
Sbjct: 396 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 455

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
           ++ G  PD+ ++++LI G C  G ++ A  +F  ++E  Y    D FN L+         
Sbjct: 456 SQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNM 515

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEG 526
            ++ ++F  MI KG  P+  TY +LV+G
Sbjct: 516 QMAEKIFGEMISKGYKPDLYTYRVLVDG 543



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 222/459 (48%), Gaps = 3/459 (0%)

Query: 96  PDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           P    A N + D L       +A KV   M+S+G+ PDA ++T  +   C  G    A++
Sbjct: 7   PPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALR 66

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L+  + + G     + Y ++VRGL   G+   +    D ++++ + P+  T++ +L A  
Sbjct: 67  LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC 126

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           ++  +  +  LL  ++ +G   N  + N+ + GLC+ GR EEA+     + +    P+VV
Sbjct: 127 QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVV 185

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YN L+R LC + + +EA + L  M      P   TYN +I           A ++L + 
Sbjct: 186 TYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDA 245

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
           +   F P   +Y  +I  LC+EG V+  ++  ++   +  KP+   YN L   LC  G +
Sbjct: 246 IFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLI 305

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
             A  ++  +           Y  VI  LC+ G    A  ++ +    G+ PD +T++++
Sbjct: 306 LHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTM 365

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G C    ++ AL++   M  Y   PD   +N++L GLCK+ +     E F+ MI KG 
Sbjct: 366 IDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGC 425

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            PN  TY IL+E     ++LE ++ V+  +    +V ++
Sbjct: 426 RPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDT 464



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 227/467 (48%), Gaps = 2/467 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +++ +G   +       +  LC+  ++++A+ ++E M  + I PD  +Y  L+  LCK
Sbjct: 138 LAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCK 196

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A Q + +M + G   +  TYN+++ G C    L ++ + L   I KG VP+  T
Sbjct: 197 DSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVT 256

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+     E  V  A++L ++  AK  KP+LV YN L+ GLC++G    A++   ++ 
Sbjct: 257 YCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMV 316

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P++ +YNI++  LC  G   +A  ++ +       P + T+N +I       K D
Sbjct: 317 EDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLD 376

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL++++ M      P A +YN ++  LC  GK   V +  ++M  + C+PN  TYN L 
Sbjct: 377 SALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 436

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C + +++EA  +I  +           +  +I   CR G    A+ L  ++ + G++
Sbjct: 437 ENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 496

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
             + T++ LI     +  ++ A +IF  M    YKPD+  +  L+ G CK+   D +   
Sbjct: 497 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVH 556

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
              M+ KG +P+  T+  ++  +A    +  +  ++  +    VV E
Sbjct: 557 LAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPE 603



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 224/485 (46%), Gaps = 42/485 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+ +A   L RM+++G  PD      ++   CK + +++A ++++  +  G +PD  
Sbjct: 196 KDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRV 255

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LC +G+V  A++L  + +      + V YNSLV+GLC  G +  +LQ ++ +
Sbjct: 256 TYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 315

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+ +TY+ ++    K   +  A  +++D I KG  P++ ++N ++ G CK  + 
Sbjct: 316 VEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKL 375

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A++    +   G  P+ ++YN +L  LC  G+ +E NE   EM      P  +TYNIL
Sbjct: 376 DSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 435

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +     + + A  V+  M +    P   S+N +I   C  G +D              
Sbjct: 436 IENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD-------------- 481

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                                A+ + Q L  K  S+  + +  +I +   K     A ++
Sbjct: 482 --------------------GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 521

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM   G+ PD YTY  L+ G C    ++ A      M    + P +  F  +L  L  
Sbjct: 522 FGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAM 581

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE--VLKELQLRQVVSES 552
           + R   ++ +  +M+  G +P       +V+ I   D+ E++A   +++EL  +  +S  
Sbjct: 582 NHRVSEAVAIIHIMVRMGVVPE------VVDTILSTDKKEIAAPKILVEELMKKGHISYP 635

Query: 553 AVERL 557
             E L
Sbjct: 636 TYEVL 640



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 219/453 (48%), Gaps = 12/453 (2%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM+S G  PD    T  +   C   +   A++++  +   G      +Y  +V  L   G
Sbjct: 35  RMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHG 94

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +   A  L ++M       +  T+N+++  LC  G++ +S   L +++++G+  N FT +
Sbjct: 95  HGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCN 154

Query: 208 F----LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
                L E    E  V A ++ +D  IA    P++V+YN L+ GLCK+ + +EA ++ R 
Sbjct: 155 IWIRGLCEGGRLEEAV-ALVESMDAYIA----PDVVTYNTLMRGLCKDSKVQEAAQYLRR 209

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + ++G  P+  +YN ++   C     +EA ELL +       P  VTY  LI  L   G 
Sbjct: 210 MMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGD 269

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN- 382
            + AL++ +E      +P    YN ++  LC +G +   ++ +++M    C P+  TYN 
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNI 329

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +  LC +G + +A A++ +    +   P  F +  +I   C++ K   A QL+  M  Y
Sbjct: 330 VINGLCKMGNISDA-AVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMY 388

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD+ TY+S++ GLC  G  +E  E F  M     +P+   +N L+   CK  + + +
Sbjct: 389 GIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 448

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             V   M + G +P+  ++  L+ G     +L+
Sbjct: 449 SGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 187/420 (44%), Gaps = 2/420 (0%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G  P A +Y  +++ L        A ++  +M   G   +  T+   ++  C+ G  + +
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           L+ L  L ++G       Y  ++   Y     + A  L D+++ +   P++ ++N +L  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           LC++G   E+      +  +G   N  + NI +R LC  GR EEA  L+  MD    +P 
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPD 183

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           +VTYN L+  L    K   A + L  M+     P   +YN II   C    +    + L 
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
               +   P+  TY  L   LC  G V+ A  +      K        Y  ++  LCR+G
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
               A Q++ EM + G  PD +TY+ +I GLC  G I +A  +        Y PDV  FN
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 363

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ G CK  + D +L++ + M   G  P+  TY  ++ G+    + +   E  +E+ L+
Sbjct: 364 TMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILK 423



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 194/395 (49%), Gaps = 2/395 (0%)

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+ +G P     YN+++  L      +Q+ +   R++  G+ P+A T++  +++      
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
            H A++LL  +  +G     ++Y  ++ GL   G   +A   F ++  +   P+V ++N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           +L +LC +G   E+  LLA++     S    T NI I  L   G+ + A+ +++ M    
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
             P   +YN ++  LC + KV    + L +M ++ C P++ TYN +    C    +QEA 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +++    K     +  Y  +I  LC +G   +A +L  E       PD   Y+SL++GL
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C +GLI  AL++   M E    PD+  +N ++ GLCK      +  V    I KG +P+ 
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            T+  +++G   + +L+ + ++++ + +  +  ++
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDA 394


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 247/507 (48%), Gaps = 41/507 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCK---ANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ DA   L+ M  +G  P       +L   C        + A++V++ +   G   D  
Sbjct: 130 RIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVG 189

Query: 135 SYTYLVNCLCKKG-NVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           +   ++N +C +G +V  A++L+  +   +G   + V+YN++++GLCM     +    ++
Sbjct: 190 NCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLME 249

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +++ G  PN  T++ L+    +        ++L  ++  G  P++  Y  +L G+CKEG
Sbjct: 250 EMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEG 309

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             E A      +PS G +PNVV YN +L+ LC   RWE+A ELLAEM   D     VT+N
Sbjct: 310 HLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFN 369

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD------------ 360
           IL+     +G     +++L++M++    P   +Y  +I   C EG +D            
Sbjct: 370 ILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC 429

Query: 361 ----------LVVKCL-------------DQMFHRRCKPNEGTYNG-LAMLCGVGKVQEA 396
                     +V+K L              QM  + C PN  T+N  +  LC  G V++A
Sbjct: 430 GCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQA 489

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             +++ +     S     Y  VI  L + GKT +A +LL  M   G +P++  YSS+   
Sbjct: 490 IELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 549

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           L  EG I   +++F  +++   + D   +NA++  LCK   TD ++E    M+  G MPN
Sbjct: 550 LSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPN 609

Query: 517 ETTYTILVEGIAHQDELELSAEVLKEL 543
           E+TYTIL+ G+A +  ++ + E+L EL
Sbjct: 610 ESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 217/416 (52%), Gaps = 9/416 (2%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +V+  C+ G +  A +L   +     P N  TY  +VR LC  G +  +L  LD + 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 196 QKGLVPNAFTYSFLLEAAYKERGV---HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++G  P    Y  +LEAA    G     +A+++L D+  +G   ++ + N++L  +C +G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 253 -RTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              +EA+R  RDLP+  G +P+VVSYN +L+ LCM  RW    +L+ EM      P +VT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +N LIG L  +G  +   +VL +MV     P    Y  ++  +C EG +++  + LD+M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
               KPN   YN  L  LC   + ++A  ++  + +         +  ++   C+ G  Y
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +  +LL +M ++G  PD  TY+++I G C EGLI+EA+ +   M     +P+  ++  +L
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            GLC + R   + ++   MIE+G  PN  T+  ++  +  +  +E + E+LK++ L
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLL 498



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 1/256 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE+M+  G  PDV+  T ++   CK   + +A+ +++ M + G  P+  SYT ++  LC 
Sbjct: 388 LEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCS 447

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A  L+ +M + G   N VT+N+++  LC  G + Q+++ L +++  G  P+  +
Sbjct: 448 AERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLIS 507

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS +++   K      A++LL+ ++ KG  PN + Y+ + + L KEGR    I+ F ++ 
Sbjct: 508 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQ 567

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
                 + V YN ++ SLC  G  + A E LA M      P   TY ILI  LA  G   
Sbjct: 568 DVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVK 627

Query: 326 HALKVLDEMV-KGRFR 340
            A ++L E+  KG  R
Sbjct: 628 EAQEMLTELCSKGALR 643



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 136/308 (44%), Gaps = 10/308 (3%)

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + L+  LC  GRT EA R      +      VV+YN ++   C  G+   A  L A +  
Sbjct: 53  SALIRSLCAAGRTAEAARALSAA-AARGGAGVVAYNAMVSGYCRAGQLASARRLAASV-- 109

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P   TY  ++ +L   G+   AL VLDEM +    P    Y+ I+   CS G    
Sbjct: 110 -PVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGG 168

Query: 362 ---VVKCLDQMFHRRCKPNEGTYN-GLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEF-Y 415
               V+ L  +  R C  + G  N  L  +C   G V EA  +++ L       P    Y
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             V+  LC   +  +   L+ EM + G  P+  T+++LI  LC  GL E   ++   M +
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
           +   PD+  +  +L G+CK    +++ E+   M   G  PN   Y  +++G+   +  E 
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348

Query: 536 SAEVLKEL 543
           + E+L E+
Sbjct: 349 AEELLAEM 356



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 35/225 (15%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A + L+ M + G +P+ +  T +L  LC A +   A  +M  M+  G  P+  ++  
Sbjct: 416 IDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNT 475

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LCKKG V  A++L+++M   G   + ++Y++++ GL   G  +++L+ L+ ++ KG
Sbjct: 476 VINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 535

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDI----------------------------- 229
           + PN   YS +  A  KE  ++  +++ D+I                             
Sbjct: 536 MSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAI 595

Query: 230 ------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
                 ++ G  PN  +Y +L+ GL  EG  +EA     +L SKG
Sbjct: 596 EFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K ++A   L  MV+KG  P+ +  +++   L K  ++ + I++ + +    I 
Sbjct: 513 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIR 572

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            DA  Y  +++ LCK+G    A++ +  M   G   N  TY  L+RGL   G + ++ + 
Sbjct: 573 SDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEM 632

Query: 191 LDRLIQKGLVPNAFTYSF 208
           L  L  KG +   F   F
Sbjct: 633 LTELCSKGALRKHFMKHF 650


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 236/483 (48%), Gaps = 4/483 (0%)

Query: 64  RKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA-IKVME 122
           R    N+ +  R+  ++DA      M+ +  +P ++Q   LL  + K      A I + +
Sbjct: 89  RDKHQNDASSFRN--IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSK 146

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
            M  +G+ PD  +   L+NC  +   V     ++ K+   G     VT+N+L+ GLC +G
Sbjct: 147 QMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVG 206

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
              Q+++  D ++ +G  P+  TY+ ++    K     AA  L   +   G +P++V+Y+
Sbjct: 207 KFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYS 266

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            ++  LCK+ R  EA+  F  + +KG  PN+ +YN L++ LC   RW EA+ +L EM   
Sbjct: 267 TIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL 326

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           +  P IVT+++LI      G    A  VL  M +    P+  +Y+ ++     + +V   
Sbjct: 327 NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEA 386

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            K  D M  + CKP+  +YN L    C   ++ EA  +   + ++  +     Y  +I  
Sbjct: 387 RKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDG 446

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC+ G+  +A  L   M   G  PD  TYS L+ G C +G + +A  +F  M+    KP+
Sbjct: 447 LCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPN 506

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           +  +N L+  +CKSR    + ++F  +  +G  PN   YT ++ G+  +  L+ + E  +
Sbjct: 507 MVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFR 566

Query: 542 ELQ 544
            ++
Sbjct: 567 NME 569



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 223/454 (49%), Gaps = 11/454 (2%)

Query: 77  HKLNDAFLQLER----------MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS 126
           H L + F QL+R          ++  G +  +V    L+  LCK  K  +A+++ + MV+
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVA 220

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
            G  PD  +YT ++N LCK G    A  L  KM + G   + VTY++++  LC    +N+
Sbjct: 221 RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 280

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +L     +  KG+ PN FTY+ L++          A  +L+++++    PN+V++++L+ 
Sbjct: 281 ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 340

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
             CKEG   EA    + +   G EPNVV+Y+ L+    ++    EA +L   M      P
Sbjct: 341 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKP 400

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            + +YNILI       +   A ++ +EM+     P   SYN +I  LC  G++       
Sbjct: 401 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 460

Query: 367 DQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             M      P+  TY+ L    C  G + +AF + +++ +         Y  +I ++C+ 
Sbjct: 461 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 520

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
               +A +L  E+   G  P+   Y+++I GLC EGL++EALE F  MEE    P+  ++
Sbjct: 521 RNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSY 580

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           N ++ G  + +    ++++   M EKG + +  T
Sbjct: 581 NVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 169/312 (54%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++N+A      M +KG  P++    +L+  LC  ++ ++A  ++  M+S  I+
Sbjct: 270 DSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIM 329

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +++ L+N  CK+GNV  A  +++ M + G   N VTY+SL+ G  +   + ++ + 
Sbjct: 330 PNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKL 389

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I KG  P+ F+Y+ L+    K + +  A +L +++I +G  P++VSYN L+ GLC+
Sbjct: 390 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 449

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA   F+++ + G  P++ +Y+ILL   C +G   +A  L   M      P +V 
Sbjct: 450 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 509

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNILI ++        A K+  E+     +P+   Y  II  LC EG +D  ++    M 
Sbjct: 510 YNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 569

Query: 371 HRRCKPNEGTYN 382
              C PNE +YN
Sbjct: 570 EDGCPPNEFSYN 581



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 4/146 (2%)

Query: 29  IPNLHSFS-LNKGFIR--VLASTQVTISPKDSVYTKPNRKPGNN-NDTRHRDHKLNDAFL 84
           +P+L ++S L  GF +   LA          S Y KPN    N   D   +   L +A  
Sbjct: 469 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARK 528

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
               +  +G +P+V   T ++  LCK   + +A++    M   G  P+  SY  ++    
Sbjct: 529 LFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFL 588

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVT 170
           +  +   A+QL+ +M + G+  +  T
Sbjct: 589 QHKDESRAVQLIGEMREKGFVADVAT 614


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 240/482 (49%), Gaps = 4/482 (0%)

Query: 81  DAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D  L++++ M+ KG  PD    T L+   CK  + K+A  + E M SSG+ P+  +YT L
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++   K+GN+  A+++ ++M   G   N VTYN+++ G+   G + +++   + ++  G+
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+ +TY+ L++   K   +  A +LL ++ A+   P+  +Y+VL++GLC     ++A  
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               +   G +PNV  Y  L+++   E R+E A ELL  M      P +  YN LI  L 
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
              K + A  +L +M +   +P+A +Y   I      G++ +  +    M      PN  
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            Y  L    C VG   EA +  + +  K        Y  +I SL + GKT +A  +  + 
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL--LGLCKSR 496
            K G  PD + Y+SLI G C EG IE+A +++  M      P++  +N L+   G CKS 
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSG 712

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
               + ++F  MI KG  P+   Y IL++G   +  LE +  +  E Q + V S SA   
Sbjct: 713 NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNS 772

Query: 557 LV 558
           L+
Sbjct: 773 LI 774



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 242/501 (48%), Gaps = 37/501 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           LN+A       +S+G  P ++   NL+ DL KAN M    KV   MV + I+PD  +YT 
Sbjct: 188 LNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTN 247

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK- 197
           ++   CK G+V     ++ +ME    P N  TYN+ + GLC  G ++++L+    +++K 
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEMEKECKP-NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG 306

Query: 198 ----------------------------------GLVPNAFTYSFLLEAAYKERGVHAAM 223
                                             GL PN FTY+ L++   KE  +  A+
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           ++ D++I +G K N+V+YN ++ G+ K G   +A+  F ++   G EP+  +YN+L+   
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGY 426

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
                  +A ELLAEM     +P+  TY++LI  L +      A +VLD+M++   +P+ 
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
             Y  +I     E + ++ ++ L  M      P+   YN L + LC   KV+EA  ++  
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +G K        Y   I    + G+   A +   +M   G  P++  Y+ LI+G C  G 
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
             EAL  F  M E    PD+  ++A++  L K+ +T  ++ VF   ++ G +P+   Y  
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666

Query: 523 LVEGIAHQDELELSAEVLKEL 543
           L+ G   + ++E ++++  E+
Sbjct: 667 LISGFCKEGDIEKASQLYDEM 687



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 235/510 (46%), Gaps = 68/510 (13%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  + +A    + M+++G K +VV    ++  + KA +M KA+ +   M+ +GI PD  
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTW 417

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++   K  ++  A +L+ +M+      +  TY+ L+ GLC   +L ++ + LD++
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ G+ PN F Y  L++A  +E     A++LL  +IA G  P+L  YN L+ GLC+  + 
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKV 537

Query: 255 EEAI-----------------------------------RFFRDLPSKGFEPNVVSYNIL 279
           EEA                                    R+F+D+ S G  PN V Y IL
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           ++  C  G   EA      M      P I  Y+ +I SL+ +GKT  A+ V  + +K   
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAI 399
            P    YN +I+  C EG ++   +  D+M H    PN   YN L               
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL--------------- 702

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           I   G                  C+ G   +AF+L  EM   G +PD Y Y  LI G   
Sbjct: 703 INDYG-----------------YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGK 745

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           EG +E+AL +F   ++      +  FN+L+   CK  +   + E+F  M++K   PN  T
Sbjct: 746 EGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVT 804

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVV 549
           YTIL++     + +E + ++  +++ R ++
Sbjct: 805 YTILIDAYGKAEMMEEAEQLFLDMETRNII 834



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 206/443 (46%), Gaps = 5/443 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M++ G  PD+     L+  LC+A K+++A  ++  M   GI P+A +Y   +N   K
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +  + M   G   N V Y  L++G C +GN  ++L     +++KGL+P+   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS ++ +  K      AM +    +  G  P++  YN L++G CKEG  E+A + + ++ 
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 266 SKGFEPNVVSYNILLRSL--CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
             G  PN+V YN L+     C  G   EA +L  EM     SP    Y ILI      G 
Sbjct: 689 HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 748

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            + AL +  E  + +   S +++N +I   C  GKV    +  D M  ++  PN  TY  
Sbjct: 749 LEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 807

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L    G  ++ E    +      +N  P    Y  ++ S  + G  ++   L  +M   G
Sbjct: 808 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 867

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
              D+  Y  +    C EG   EAL++         K + D F+AL+  LCK ++    L
Sbjct: 868 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 927

Query: 503 EVF-QMMIEKGQMPNETTYTILV 524
           E+  +M  E+  + ++T  T+L+
Sbjct: 928 ELLSEMGKEELSLSSKTCNTLLL 950



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 193/403 (47%), Gaps = 10/403 (2%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+    +  N+L+R L     +    +    +++  +VP+ +TY+ +++A  K   V   
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             +L ++  K  KPNL +YN  + GLC+ G  +EA+   + +  KG  P+  +Y +L+  
Sbjct: 262 KMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C + R +EA  +   M     +P   TY  LI      G  + AL++ DEM+    + +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFA 398
             +YN +I  +   G++   +   ++M     +P+  TYN    G      + K  E  A
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLA 440

Query: 399 IIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +++    +  +P  F Y  +I+ LC      +A ++L +M + G  P+ + Y +LI+  
Sbjct: 441 EMKA----RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAY 496

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
             E   E A+E+  +M      PD+  +N L++GLC++++ + +  +   M EKG  PN 
Sbjct: 497 VQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNA 556

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            TY   +   +   E++++    K++    +V  + +  ++++
Sbjct: 557 HTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIK 599



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 157/342 (45%), Gaps = 36/342 (10%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A    + M+ KG  PD+   + +++ L K  K K+A+ V    + +G++PD   Y  L+
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR--GLCMLGNLNQSLQFLDRLIQKG 198
           +  CK+G++  A QL ++M   G   N V YN+L+   G C  GNL ++ +  D +I KG
Sbjct: 669 SGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG 728

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAM----------------------------------K 224
           + P+ + Y  L++   KE  +  A+                                  +
Sbjct: 729 ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARE 788

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           L DD++ K   PN+V+Y +L+    K    EEA + F D+ ++   PN ++Y  LL S  
Sbjct: 789 LFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYN 848

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G   +   L  +M+    +   + Y ++  +    GK+  ALK+L++ +    +    
Sbjct: 849 QIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDD 908

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
            ++ +I  LC E ++  V++ L +M       +  T N L +
Sbjct: 909 VFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 950



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 139/312 (44%), Gaps = 38/312 (12%)

Query: 87  ERMVSKGHKPDVVQATNLL--YDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           + M+  G  P++V    L+  Y  CK+  + +A K+ + M+S GI PD   Y  L++   
Sbjct: 685 DEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCG 744

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K+GN+  A+ L  + +     + +  +NSL+   C  G + ++ +  D ++ K L PN  
Sbjct: 745 KEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 803

Query: 205 TYSFLLEA----------------------------------AYKERGVHAAM-KLLDDI 229
           TY+ L++A                                  +Y + G    M  L  D+
Sbjct: 804 TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 863

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
            A+G   + ++Y V+ +  CKEG++ EA++       +G +     ++ L+  LC E + 
Sbjct: 864 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 923

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
               ELL+EM   + S +  T N L+      G  D A KVL  M +  + P++ S    
Sbjct: 924 STVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDS 983

Query: 350 IARLCSEGKVDL 361
           I+    + K D+
Sbjct: 984 ISTGRDDMKSDI 995


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 223/467 (47%), Gaps = 1/467 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     RM+     P +V    +L  + K  +    + +   M S GI  +  +   
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    V +A  ++ K+   G   +T ++ +L++GLC+ G + ++L   D++I +G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+   Y+ L+    K     AA++LL  +     +P++V Y  L+  LCK+ +  +A 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG  PN+V+ N L+ +LC  G W+  N LL EM      P  ++   ++ +L
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A  V+D M +    P   +Y  +I   C   ++D  VK  D M H+ C PN 
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNV 354

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +YN L    C + ++ +A  + + +  ++       Y  +I  LC  G+   A  L  E
Sbjct: 355 FSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFRE 414

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TY  L+  LC    +++A+ +   +E  +  PD+  +  ++ G+C++  
Sbjct: 415 MVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGE 474

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + + ++F  +  KG  PN  TY I+  G+  +  L+ + ++  E+ 
Sbjct: 475 LEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMD 521



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 223/461 (48%), Gaps = 2/461 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++N AF  L +++  G +PD    T L+  LC   ++ +A+ + + M+  G  PD   Y
Sbjct: 123 NRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIY 182

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N LCK G+   A++L+  ME      + V Y +L+  LC      Q+      +I 
Sbjct: 183 ATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMIT 242

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ PN  T + L+ A            LL++++     PN +S   ++  LCKEG   +
Sbjct: 243 KGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQ 302

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      +   G EP+VV+Y  L+   C+    +EA ++   M     +P + +YN LI 
Sbjct: 303 AHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLIN 362

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A+ + +EM + +  P+  +YN +I  LC  G++   +    +M      P
Sbjct: 363 GYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIP 422

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY  L   LC    + +A A+++++         + Y  VI  +CR G+   A  L 
Sbjct: 423 DLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLF 482

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             ++  G  P+ +TY+ +  GLC  GL++EA ++F+ M+E     D   +N +  G  ++
Sbjct: 483 SNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRN 542

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
             T  ++++ + M+ +G   + +T T+LV G+   D L+ S
Sbjct: 543 NETSRAIQLLEEMLARGFSCDVSTTTLLV-GMLSDDGLDQS 582



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 211/434 (48%), Gaps = 3/434 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  A+     M+     P    +  ++  + K       + L  KM+ +G P N  T 
Sbjct: 53  NTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTL 112

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+   C L  +N +   L ++++ G  P+  +++ L++    E  +  A+ L D +I 
Sbjct: 113 NVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIW 172

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G +P++V Y  L+ GLCK G T  AIR  R +     +P+VV Y  L+ SLC + +  +
Sbjct: 173 EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQ 232

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  L +EM     SP IVT N L+ +L   G+  H   +L+EMV  +  P+A S   ++ 
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC EG V      +D MF    +P+  TY  L    C   ++ EA  +   + +K   +
Sbjct: 293 ALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK-GCA 351

Query: 411 PQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           P  F Y  +I   C+  +  +A  L  EM +    P++ TY++LI GLC  G +++A+ +
Sbjct: 352 PNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIAL 411

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M      PD+  +  LL  LCK+   D ++ + + +      P+   YTI+++G+  
Sbjct: 412 FREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCR 471

Query: 530 QDELELSAEVLKEL 543
             ELE + ++   L
Sbjct: 472 AGELEDARDLFSNL 485



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 188/388 (48%), Gaps = 34/388 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +   AF     M++KG  P++V   +L+Y LC   + K    ++  MV S I+P+A 
Sbjct: 226 KDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAI 285

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S T +V+ LCK+G V  A  +V+ M   G   + VTY +L+ G C+   ++++++  D +
Sbjct: 286 SLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMM 345

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG  PN F+Y+ L+    K   +  AM L +++  +   PN V+YN L+ GLC  GR 
Sbjct: 346 VHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRL 405

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++AI  FR++ + G  P++V+Y ILL  LC     ++A  LL  ++G +  P I  Y I+
Sbjct: 406 QDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIV 465

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +   G+ + A  +   +     +P+  +YN +   LC  G +D   K   +M    C
Sbjct: 466 IDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENAC 525

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             +  TYN +                           Q F         R  +T +A QL
Sbjct: 526 SADGCTYNTIT--------------------------QGFL--------RNNETSRAIQL 551

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           L EM   GF+ D  T + L+  L  +GL
Sbjct: 552 LEEMLARGFSCDVSTTTLLVGMLSDDGL 579



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 157/309 (50%), Gaps = 1/309 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ M   G +PDVV  T L+   C  ++M +A+KV +MMV  G  P+  SY  L+N  CK
Sbjct: 307 VDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCK 366

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  AM L E+M       NTVTYN+L+ GLC +G L  ++     ++  G +P+  T
Sbjct: 367 IERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVT 426

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  LL+   K   +  AM LL  I      P++  Y +++ G+C+ G  E+A   F +L 
Sbjct: 427 YRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLS 486

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           SKG +PNV +YNI+   LC  G  +EA +L  EMD    S    TYN +      + +T 
Sbjct: 487 SKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETS 546

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF-HRRCKPNEGTYNGL 384
            A+++L+EM+   F    ++   ++  L  +G        L+ MF H R +  +  +   
Sbjct: 547 RAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDTVFCKE 606

Query: 385 AMLCGVGKV 393
             +  +GKV
Sbjct: 607 DDINALGKV 615



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 1/117 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L DA      + SKG KP+V     + + LCK   + +A K+   M  +   
Sbjct: 467 DGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACS 526

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
            D  +Y  +     +      A+QL+E+M   G+  + V+  +L+ G+     L+QS
Sbjct: 527 ADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCD-VSTTTLLVGMLSDDGLDQS 582


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 263/544 (48%), Gaps = 15/544 (2%)

Query: 7   SVSTLANPSPEPFRKAYGFYSQIPNLHS---FSLNKGFIRVLASTQVTISPKDSVYTKPN 63
           SVS    P+P+ F  +   YSQ+ + H     SL   F R+L      I+P     T P 
Sbjct: 8   SVSHFQFPNPK-FIISTSLYSQLHHHHQDDEHSLVSSFNRIL-----NINP-----TPPI 56

Query: 64  RKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM 123
            + G    +  + +    A      M   G   D+V    L+    +      +  V   
Sbjct: 57  FEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFAN 116

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           ++  G  P+A + T L+  LC KG +  A+   +K+   G+  N V Y +L+ GLC +G 
Sbjct: 117 ILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQ 176

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            + +LQ L R+  K + PN   Y+ ++++  K + V+ A  L  ++++KG  P++V+Y+ 
Sbjct: 177 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSA 236

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L++G C  G+  +AI  F  + S+   P+V +++IL+   C EGR +EA  +LA M    
Sbjct: 237 LISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG 296

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  L+       + + A  + + M +G    +  SYN +I   C   KVD  +
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAM 356

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
               +M  +   P+  TYN L   LC  GK+  A  ++  + ++     +  Y  ++ +L
Sbjct: 357 NLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDAL 416

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+  +  +A  LL +M   G  PD YTY+ LI GLC  G +++A  IF  +    Y   V
Sbjct: 417 CKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITV 476

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +  ++ G C +   D +L +   M + G +PN  TY I++  +  +DE +++ ++L+E
Sbjct: 477 YTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLRE 536

Query: 543 LQLR 546
           +  R
Sbjct: 537 MIAR 540



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 238/495 (48%), Gaps = 6/495 (1%)

Query: 73  RHRD--HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            H+D  H L  +F    R+++    P + +   +L  L K N  + AI +   M  +GI 
Sbjct: 32  HHQDDEHSLVSSF---NRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIA 88

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  ++  L+NC  + G+  ++  +   +   GY  N +T  +L++GLC+ G ++Q+L F
Sbjct: 89  SDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHF 148

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D+++  G   N   Y  L+    K     AA++LL  +  K  +PN+V YN ++  +CK
Sbjct: 149 HDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCK 208

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
                EA   + ++ SKG  P+VV+Y+ L+   C+ G+  +A  L  +M   + +P + T
Sbjct: 209 VKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYT 268

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           ++IL+      G+   A  VL  M+K   +P   +Y  ++   C   +V+      + M 
Sbjct: 269 FSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMA 328

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 N  +YN +    C + KV EA  + + +  K        Y  +I  LC+ GK  
Sbjct: 329 QGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKIS 388

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +L+ EM   G   D  TY+S++  LC    +++A+ +   M++   +PD+  +  L+
Sbjct: 389 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILI 448

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            GLCK  R   +  +F+ ++ KG      TYT++++G    D  + +  +L +++    +
Sbjct: 449 DGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCI 508

Query: 550 SESAVERLVMQYDFE 564
             +    +++   FE
Sbjct: 509 PNAKTYEIIILSLFE 523



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 97/192 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A    + M  K   PDVV   +L+  LCK+ K+  A+K+++ M   G+  D  +Y 
Sbjct: 351 KVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYN 410

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A+ L+ KM+D G   +  TY  L+ GLC  G L  +    + L+ K
Sbjct: 411 SILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVK 470

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G     +TY+ +++          A+ LL  +   G  PN  +Y +++  L ++   + A
Sbjct: 471 GYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMA 530

Query: 258 IRFFRDLPSKGF 269
            +  R++ ++G 
Sbjct: 531 EKLLREMIARGL 542



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 63/130 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H+++ A   L +M  +G +PD+   T L+  LCK  ++K A  + E ++  G  
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
               +YT ++   C       A+ L+ KMED G   N  TY  ++  L      + + + 
Sbjct: 474 ITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKL 533

Query: 191 LDRLIQKGLV 200
           L  +I +GL+
Sbjct: 534 LREMIARGLL 543


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 245/477 (51%), Gaps = 10/477 (2%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII---PDASSYTYLVNCLCKKGNVGYAM 153
           D V    +L  LC+   +  A+ ++ +M     +   P+A SYT L+  LC       A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            L+  M+D G   + VTY +L+RGLC   +++ +++ L+ + + G+ PN   YS LL   
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K     +  K+ +++  +G +P++V Y  L+  LC+ G+ ++A R    +  +G EPNV
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V+YN+L+ S+C EG   EA +L   M      P +VTYN LI  L+   + D A+ +L+E
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 334 MVKG--RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGV 390
           M++G  R RP   ++N +I  LC  G +   ++    M    C+ N   +N L   L  V
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRV 354

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            KV++A  ++  + +     P  F Y  +I   C+  +  +A   L EM   G  P+   
Sbjct: 355 HKVKKAMELMDEMAS-SGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVH 413

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y  L++ +C +G++ +A ++F  M+  + K D   ++ ++ G  KS    ++ E  + MI
Sbjct: 414 YIPLLKAMCDQGMMGQARDLFNEMDR-NCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMI 472

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV-ERLVMQYDFEG 565
           ++G +P+  TY+I +   A   +L  +  VLK++     V + AV + L+  Y  +G
Sbjct: 473 DEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKG 529



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 208/439 (47%), Gaps = 4/439 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D +   A   L  M   G +PDVV    L+  LC A  +  A++++  M  SGI P+   
Sbjct: 107 DRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVV 166

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y+ L++  CK G      ++ E+M   G   + V Y +L+  LC  G + ++ + +D + 
Sbjct: 167 YSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT 226

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++GL PN  TY+ L+ +  KE  V  A+ L  ++  KG +P++V+YN L+TGL      +
Sbjct: 227 ERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMD 286

Query: 256 EAIRFFRDL--PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           EA+    ++        P+++++N ++  LC  G   +A ++ A M        +V +N+
Sbjct: 287 EAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNL 346

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LIG L    K   A++++DEM     +P + +Y+ +I   C   +V+     L +M H+ 
Sbjct: 347 LIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQG 406

Query: 374 CKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            +P    Y   L  +C  G + +A  +   + ++        Y  +I    + G+   A 
Sbjct: 407 MEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAE 465

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           + L +M   G  PD+ TYS  I      G +  A  +   M    + PDV  F++L+ G 
Sbjct: 466 EFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGY 525

Query: 493 CKSRRTDLSLEVFQMMIEK 511
                T+  LE+ + M  K
Sbjct: 526 GAKGDTEKILELTREMTAK 544



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 207/437 (47%), Gaps = 11/437 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M   G +P+VV  + LL+  CK  + +   KV E M   GI PD   YT L++ LC+
Sbjct: 152 LNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCR 211

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  A ++++ M + G   N VTYN L+  +C  G++ ++L     + +KG+ P+  T
Sbjct: 212 HGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVT 271

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGK--PNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           Y+ L+        +  AM LL++++    +  P+L+++N ++ GLCK G   +A++    
Sbjct: 272 YNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAM 331

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   G   N+V++N+L+  L    + ++A EL+ EM      P   TY+ILI       +
Sbjct: 332 MAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQ 391

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            + A   L EM      P    Y P++  +C +G +       ++M  R CK +   Y+ 
Sbjct: 392 VERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYST 450

Query: 384 L---AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           +   A   G  K+ E F  ++ + ++        Y   I    + G    A ++L +MT 
Sbjct: 451 MIHGAFKSGEKKIAEEF--LKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTA 508

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS---RR 497
            GF PD   + SLI+G   +G  E+ LE+   M   D   D    + ++  L  S   ++
Sbjct: 509 SGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQK 568

Query: 498 TDLSLEVFQMMIEKGQM 514
              SL  F   I KG +
Sbjct: 569 LLQSLPGFDTEISKGDV 585



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 178/375 (47%), Gaps = 9/375 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  R  K+  A   ++ M  +G +P+VV    L+  +CK   +++A+ + + M   G+ 
Sbjct: 207 DSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQ 266

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKM---EDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           PD  +Y  L+  L     +  AM L+E+M   E    P + +T+NS++ GLC +G + Q+
Sbjct: 267 PDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRP-DLMTFNSVIHGLCKIGWMRQA 325

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           LQ    + + G   N   ++ L+    +   V  AM+L+D++ + G +P+  +Y++L+ G
Sbjct: 326 LQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILING 385

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK  + E A  +  ++  +G EP  V Y  LL+++C +G   +A +L  EMD   +   
Sbjct: 386 FCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDA 445

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
              Y+ +I      G+   A + L +M+     P A +Y+  I      G +    + L 
Sbjct: 446 -AAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLK 504

Query: 368 QMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           QM      P+   ++ L    G  G  ++   + + +  K  +   +    ++TSL   G
Sbjct: 505 QMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL---G 561

Query: 427 KTYQAFQLLYEMTKY 441
            + +  +LL  +  +
Sbjct: 562 ASIEGQKLLQSLPGF 576



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 114/231 (49%), Gaps = 8/231 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R HK+  A   ++ M S G +PD    + L+   CK  ++++A   +  M   G+ P+  
Sbjct: 353 RVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPV 412

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+  +C +G +G A  L  +M D     +   Y++++ G    G    + +FL  +
Sbjct: 413 HYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDM 471

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +GL+P+A TYS  +    K   + AA ++L  + A G  P++  ++ L+ G   +G T
Sbjct: 472 IDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDT 531

Query: 255 EEAIRFFRDLPSK--GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           E+ +   R++ +K    +P ++S   ++ SL   G   E  +LL  + G D
Sbjct: 532 EKILELTREMTAKDVALDPKIIS--TIVTSL---GASIEGQKLLQSLPGFD 577


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 236/478 (49%), Gaps = 6/478 (1%)

Query: 81  DAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D  ++L+R M  KG  P+    T +   LC+A +M +A    E M  +G+ PD ++ + L
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 339

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++   ++G++   +++ + M   G P N +TYN L+ GLC  G + ++ + L  ++  G 
Sbjct: 340 IDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGC 399

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PN+ T+  L+E   +E  +  A++LLD++  +   P+ VSY  ++ GLC       A +
Sbjct: 400 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANK 459

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               +   G +PNVV Y+IL+ +   EGR EEA  LL  M     +P I  YN +I  L+
Sbjct: 460 LLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 519

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             GK + A   L E+     +P A ++   I      GK+    K  D+M      PN  
Sbjct: 520 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579

Query: 380 TYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            Y    ++ G    G + EA +I + L         +     I  L + G+  +A ++  
Sbjct: 580 LYT--VLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 637

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+ + G  PD +TYSSLI G C +G +E+A E+   M      P++  +NAL+ GLCKS 
Sbjct: 638 ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSG 697

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
               + ++F  M EKG  P+  TY+ +++G    + +  +  +  E+  + V   S V
Sbjct: 698 DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 755



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 236/489 (48%), Gaps = 3/489 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++N+A L  E M   G KPD    + L+    +   + + +++ ++MVS GI  +  
Sbjct: 310 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 369

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK G +  A ++++ M   G   N+ T+  L+ G C   N+ ++L+ LD +
Sbjct: 370 TYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 429

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ LVP+A +Y  ++      + +  A KLL+ +   G KPN+V Y++L+     EGR 
Sbjct: 430 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRI 489

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA R    +   G  P++  YN ++  L   G+ EEA+  L E+ G    P  VT+   
Sbjct: 490 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 549

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  GK   A K  DEM+     P+   Y  +I      G +   +    ++     
Sbjct: 550 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGV 609

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            P+  T +     L   G+VQEA  +   L  K    P  F Y  +I+  C++G+  +AF
Sbjct: 610 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK-GLVPDVFTYSSLISGFCKQGEVEKAF 668

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L  EM   G  P+ + Y++L+ GLC  G I+ A ++F  M E   +PD   ++ ++ G 
Sbjct: 669 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           CKS     +  +F  M  KG  P+   Y  LV G   + ++E +  + +E+  +   +  
Sbjct: 729 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 788

Query: 553 AVERLVMQY 561
           +   L+  Y
Sbjct: 789 SFNTLIDGY 797



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 234/475 (49%), Gaps = 2/475 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE+M   G KP+VV  + L+       ++++A ++++ M  SG+ PD   Y  +++CL K
Sbjct: 461 LEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 520

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A   + +++  G   + VT+ + + G    G + ++ ++ D ++  GL+PN   
Sbjct: 521 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 580

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+   +K   +  A+ +   + A G  P++ + +  + GL K GR +EA++ F +L 
Sbjct: 581 YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 640

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+V +Y+ L+   C +G  E+A EL  EM     +P I  YN L+  L   G   
Sbjct: 641 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 700

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A K+ D M +    P + +Y+ +I   C    V        +M  +  +P+   YN L 
Sbjct: 701 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G +++A  + + +  K  ++   F   +I   C+  K  +A QL  EM      
Sbjct: 761 HGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIM 819

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY+++I   C  G +EEA  +F  M+E +   D   + +L+ G  K  ++     +
Sbjct: 820 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           F+ M+ KG  P+E TY +++     +D L  + ++  E+  + ++++  +  L++
Sbjct: 880 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 934



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 240/487 (49%), Gaps = 36/487 (7%)

Query: 98  VVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           +++  +LL DL K   M+   KV   M+ + +  D  +YTYLV  LCK G++  A +++ 
Sbjct: 193 LIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLI 252

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY----------- 206
           +M++ G   N   Y+ ++ G+C +G+++++++    + +KGLVPN +TY           
Sbjct: 253 EMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAK 312

Query: 207 ------------------------SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
                                   S L++   +E  +   +++ D +++ G   NL++YN
Sbjct: 313 RMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYN 372

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           VL+ GLCK G+ E+A    + + + G +PN  ++ +L+   C E     A ELL EM+  
Sbjct: 373 VLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 432

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           +  P+ V+Y  +I  L +      A K+L++M     +P+   Y+ +I    SEG+++  
Sbjct: 433 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEA 492

Query: 363 VKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            + LD M      P+   YN  ++ L   GK++EA   +  +  +        +   I  
Sbjct: 493 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 552

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
             + GK  +A +   EM  +G  P++  Y+ LI G    G + EAL IF  +      PD
Sbjct: 553 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPD 612

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           V   +A + GL K+ R   +L+VF  + EKG +P+  TY+ L+ G   Q E+E + E+  
Sbjct: 613 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 672

Query: 542 ELQLRQV 548
           E+ L+ +
Sbjct: 673 EMCLKGI 679



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 223/502 (44%), Gaps = 37/502 (7%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K+ +A   L  +  +G KPD V     +    K  KM +A K  + M+  G++P+   YT
Sbjct: 523  KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 582

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+N   K GN+  A+ +  ++   G   +  T ++ + GL   G + ++L+    L +K
Sbjct: 583  VLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 642

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            GLVP+ FTYS L+    K+  V  A +L D++  KG  PN+  YN L+ GLCK G  + A
Sbjct: 643  GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 702

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             + F  +P KG EP+ V+Y+ ++   C      EA  L  EM      P    YN L+  
Sbjct: 703  RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                G  + A+ +  EM++  F  +  S+N +I   C   K+    +   +M  ++  P+
Sbjct: 763  CCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 821

Query: 378  EGTYNG-LAMLCGVGKVQEA-----------------------------------FAIIQ 401
              TY   +   C  GK++EA                                   FA+ +
Sbjct: 822  HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 881

Query: 402  SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
             +  K     +  Y  VI + C++    +AF+L  E+   G       +  LI  LC   
Sbjct: 882  KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 941

Query: 462  LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
             + EA ++   M E   KP +   N L+    ++ + D +  VF+ +   G +P+ TT  
Sbjct: 942  DLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 1001

Query: 522  ILVEGIAHQDELELSAEVLKEL 543
             LV G  +  + E +  ++K+L
Sbjct: 1002 DLVNGNLNDTDSEDARNLIKQL 1023



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 142/319 (44%), Gaps = 7/319 (2%)

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +L+  N LL  L K G  E   + +  +       +V +Y  L+ +LC  G    A  +L
Sbjct: 192 SLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVL 251

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EMD    +P    Y+++I  +   G  D A+++   M +    P+  +Y  I A LC  
Sbjct: 252 IEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRA 311

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGV---GKVQEAFAIIQSLGNKQNSSPQ 412
            +++      ++M     KP+   YN   A++ G    G + E   I   + +       
Sbjct: 312 KRMNEAKLTFEEMQKTGLKPD---YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINL 368

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  +I  LC+ GK  +A ++L  M   G  P+S T+  LI G C E  +  ALE+   
Sbjct: 369 ITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 428

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           ME+ +  P   ++ A++ GLC  +   L+ ++ + M   G  PN   Y+IL+   A +  
Sbjct: 429 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488

Query: 533 LELSAEVLKELQLRQVVSE 551
           +E +  +L  +    V  +
Sbjct: 489 IEEARRLLDGMSCSGVAPD 507



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 138/345 (40%), Gaps = 57/345 (16%)

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-------------------D 300
           F+      G    + S++IL   LC    +  AN +L +M                   +
Sbjct: 93  FYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRN 152

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHA--------------------------------- 327
            G  SP  V ++ILI S    G  D A                                 
Sbjct: 153 YGGSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMME 210

Query: 328 --LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GL 384
              KV + M+  +      +Y  ++  LC  G +    + L +M  +   PNE  Y+  +
Sbjct: 211 LFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVI 270

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             +C VG + EA  + +S+G K        Y  +   LCR  +  +A     EM K G  
Sbjct: 271 EGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLK 330

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD    S+LI G   EG I+E L I  VM       ++  +N L+ GLCK  + + + E+
Sbjct: 331 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI 390

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            + M+  G  PN  T+ +L+EG   +  +  + E+L E++ R +V
Sbjct: 391 LKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 435


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 239/470 (50%), Gaps = 1/470 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K +DA    + M+     P +V  +     + +  +    +   + +  +GI  +  +
Sbjct: 66  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              ++NC C+     +A  ++ K+   GY  +T T+N+L++GL + G +++++  +DR++
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  TY+ ++    +      A+ LL  +  +  K ++ +Y+ ++  LC++G  +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            AI  F+++ +KG + +VV+YN L+R LC  G+W +   LL +M   +  P ++T+N+L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 GK   A ++  EM+     P+  +YN ++   C + ++      LD M   +C 
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  T+  L    C V +V +   + +++  +   +    Y  ++   C+ GK   A +L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM  +G  PD  TY  L+ GLC  G +E+ALEIF  +++      +  +  ++ G+CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             + + +  +F  +  KG  PN  TYT+++ G+  +  L  +  +L++++
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 233/486 (47%), Gaps = 38/486 (7%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+  L +++  G++PD      L+  L    K+ +A+ +++ MV +G  PD  +Y  +VN
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            +C+ G+   A+ L+ KME+     +  TY++++  LC  G ++ ++     +  KG+  
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ L+    K    +    LL D++++   PN++++NVLL    KEG+ +EA   +
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +++ ++G  PN+++YN L+   CM+ R  EAN +L  M     SP IVT+  LI      
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D  +KV   + K     +A +Y+ ++   C  GK+ L  +   +M      P+  TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 382 NGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
            G+ +  LC  GK+++A  I + L   +       Y  +I  +C+ GK   A+ L   + 
Sbjct: 442 -GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  P+  TY+ +I GLC +G + EA                   N LL          
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEA-------------------NILL---------- 531

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
                 + M E G  PN+ TY  L+       +L  SA++++E++     ++++  ++V+
Sbjct: 532 ------RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585

Query: 560 QYDFEG 565
                G
Sbjct: 586 DMLLSG 591



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 203/413 (49%), Gaps = 36/413 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A + ++RMV  G +PDVV   +++  +C++     A+ ++  M    +  D  +Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC+ G +  A+ L ++ME  G  ++ VTYNSLVRGLC  G  N     L  ++ +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            +VPN  T++ LL+   KE  +  A +L  ++I +G  PN+++YN L+ G C + R  EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 258 -----------------------------------IRFFRDLPSKGFEPNVVSYNILLRS 282
                                              ++ FR++  +G   N V+Y+IL++ 
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C  G+ + A EL  EM      P ++TY IL+  L  +GK + AL++ +++ K +    
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQ 401
              Y  II  +C  GKV+        +  +  KPN  TY   ++ LC  G + EA  +++
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            +    N+     Y  +I +  R G    + +L+ EM   GF+ D+ +   +I
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 162/314 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  RD  ++ A    + M +KG K  VV   +L+  LCKA K      +++ MVS  I+
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L++   K+G +  A +L ++M   G   N +TYN+L+ G CM   L+++   
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD +++    P+  T++ L++     + V   MK+  +I  +G   N V+Y++L+ G C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A   F+++ S G  P+V++Y ILL  LC  G+ E+A E+  ++        IV 
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  +I  +   GK + A  +   +     +P+  +Y  +I+ LC +G +      L +M 
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535

Query: 371 HRRCKPNEGTYNGL 384
                PN+ TYN L
Sbjct: 536 EDGNAPNDCTYNTL 549



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 149/290 (51%), Gaps = 1/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + M+++G  P+++    L+   C  N++ +A  ++++MV +   
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++T L+   C    V   M++   +   G   N VTY+ LV+G C  G +  + + 
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  G++P+  TY  LL+       +  A+++ +D+        +V Y  ++ G+CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+A   F  LP KG +PNV++Y +++  LC +G   EAN LL +M+    +P   T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YN LI +    G    + K+++EM    F   A+S   +I  L S G++D
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GELD 594



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 34/296 (11%)

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + ++AI  F+++      P++V ++    ++    ++    +   +++    +  I T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I+I       KT  A  VL +++K  + P   ++N +I  L  EGKV   V  +D+M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            C+P+  TYN                                   ++  +CR G T  A 
Sbjct: 188 GCQPDVVTYNS----------------------------------IVNGICRSGDTSLAL 213

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            LL +M +     D +TYS++I  LC +G I+ A+ +F  ME    K  V  +N+L+ GL
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           CK+ + +    + + M+ +  +PN  T+ +L++    + +L+ + E+ KE+  R +
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 7/231 (3%)

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  EM++ R  PS   ++   + +    + +LV+    Q+       N  T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 383 GLA-MLCGVGKVQEAFAI---IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            +    C   K   A+++   +  LG + +++    +  +I  L  +GK  +A  L+  M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTT---FNTLIKGLFLEGKVSEAVVLVDRM 184

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            + G  PD  TY+S++ G+C  G    AL++   MEE + K DV  ++ ++  LC+    
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           D ++ +F+ M  KG   +  TY  LV G+    +    A +LK++  R++V
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 238/474 (50%), Gaps = 9/474 (1%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD+V  T ++  LC+  ++ +A  V+E  V +G  PD  +Y   ++ LCK   V  A QL
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           ++KM++      TVTY +LV GL   G L++++  L+++++KG  P   TY+ +++   K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE----P 271
              V  A ++  D++  G +P+   Y  L+ GLCK G+ EEA   +++  ++       P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS--PTIVTYNILIGSLAYHGKTDHALK 329
           +VV+Y  L+  LC  GR  EA ++  + +  +R   P  VTY  +I  L   G+ +   +
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDD-EAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLC 388
              EM    + P A +Y  +I        +    +   QM       +  TYN  L  LC
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             G+V EA+A   ++  +   +    Y  ++   C +G    A +L   M   G  P+  
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT-DLSLEVFQM 507
           +Y+ +IRGLC  G + +A   F  + +    PDV  FNA L GLC+   T    +E+F+ 
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFES 423

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           M+ +G  PN  +Y+IL++GI     LE++ E+ +E+  R V  +  V   ++++
Sbjct: 424 MVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRW 477



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 231/480 (48%), Gaps = 7/480 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L++AF  LER V  G +PD V     +  LCKA ++  A ++++ M     +P   
Sbjct: 19  REKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTV 78

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT LV+ L K G +  AM ++E+M + G      TY  ++ GL   G + ++ +    +
Sbjct: 79  TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 138

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK----GGKPNLVSYNVLLTGLCK 250
           +  G  P+AF Y+ L++   K      A  L  +  A+       P++V+Y  L+ GLCK
Sbjct: 139 LGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCK 198

Query: 251 EGRTEEAIRFFRD-LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
            GR  EA + F D    +GF P+ V+Y  ++  LC  GR EE  E   EM      P  V
Sbjct: 199 AGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV 258

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  LI           A +V  +M++     S  +YN I+  LC  G+V         M
Sbjct: 259 TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 318

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             R C     TY+ L    C  G V  A  + + + ++        Y  +I  LCR GK 
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME-GLIEEALEIFVVMEEYDYKPDVDNFNA 487
            +A+    ++ +    PD YT+++ + GLC     + + +E+F  M      P++ +++ 
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSI 438

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+ G+C++   +++LE+F+ M+ +G  P+   +  L+  +     ++ + EV +EL+ R 
Sbjct: 439 LMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS 498



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 195/387 (50%), Gaps = 12/387 (3%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS----SGIIPDASSYTYLVNCLC 144
           M+  G +PD    T L+  LCK+ K ++A  + +   +    +  +PD  +YT L++ LC
Sbjct: 138 MLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLC 197

Query: 145 KKGNVGYAMQLVE-KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           K G +  A Q+ + +  + G+  + VTY S++ GLC LG + +  +    +  +G  P+A
Sbjct: 198 KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 257

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ L++   K + +  A ++   ++  G   + V+YN++L GLCK GR  EA   F  
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  +G    VV+Y+ L+   C EG    A EL   M      P +V+YNI+I  L   GK
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV---VKCLDQMFHRRCKPNEGT 380
              A    +++++ R  P   ++N  +  LC   ++D V   V+  + M  +   PN  +
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ--RLDTVSDGVELFESMVSQGTSPNLHS 435

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y+ L   +C  G ++ A  I + + ++  +     +  +I  LC  G+  +A ++  E+ 
Sbjct: 436 YSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 495

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           +    PD+++Y SL+ GL     +EEA
Sbjct: 496 RRS-APDAWSYWSLLDGLSRCERMEEA 521



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 137/267 (51%), Gaps = 2/267 (0%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           +   M ++G++PD V    L+    KA  + KA +V   M+ SG +    +Y  +++ LC
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K G V  A      ME+ G     VTY++L+ G C  GN++ +++   R++ +G  PN  
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT-EEAIRFFRD 263
           +Y+ ++    +   +  A    + ++ +   P++ ++N  L GLC+   T  + +  F  
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFES 423

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + S+G  PN+ SY+IL+  +C  G  E A E+  EM     +P +V +N LI  L   G+
Sbjct: 424 MVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGR 483

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPII 350
            D AL+V  E+ + R  P A SY  ++
Sbjct: 484 VDEALEVFRELER-RSAPDAWSYWSLL 509



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 6/248 (2%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           SP +V + ++I  L    + D A  VL+  V+    P   +YN  I  LC   +VD   +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            L +M  ++C P   TY  L   L   G++ EA A+++ +  K NS   + Y  VI  L 
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK---- 479
           + G+  +A ++  +M   G  PD++ Y++LI+GLC  G  EEA  ++       +     
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVF-QMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           PDV  + +L+ GLCK+ R   + +VF    +E+G +P+  TYT +++G+     +E   E
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 539 VLKELQLR 546
              E++ R
Sbjct: 244 RFHEMRNR 251



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 3/138 (2%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
            R   ++D     E MVS+G  P++   + L+  +C+A  ++ A+++   MVS G+ PD 
Sbjct: 409 QRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDV 468

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             +  L+  LC  G V  A+++  ++E    P +  +Y SL+ GL     + ++      
Sbjct: 469 VVFNTLIRWLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDGLSRCERMEEARLLSFH 527

Query: 194 LIQKGLVPNAF--TYSFL 209
           +  +G  P  +  T  FL
Sbjct: 528 MKLQGCAPRHYDLTVRFL 545


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 240/468 (51%), Gaps = 14/468 (2%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYD-----LCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           F    RMV +    D V  T   +      LC+  +  +A+ ++  M   G +PDA  Y 
Sbjct: 143 FALYRRMVHR----DRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQ 198

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC +G V  A  L+ +M   G   +  T++ +VRG+C LG + ++ + +DR++ K
Sbjct: 199 TVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTK 258

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P   TY FLL+   + R    A  +L  +     + N+V +N ++ G   EG+  EA
Sbjct: 259 GCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEA 314

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              +  +  KG +P+  +Y+IL+  LC  GR   A  LL EM+    +P +VTY I++ S
Sbjct: 315 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D    +L+EM       ++  YN +I  LC +G++D  +  + +M  + C P+
Sbjct: 375 FCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 434

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             +YN +   LC   +++EA  + ++L  +   +    Y  +I +L R G+   A +L  
Sbjct: 435 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 494

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM  +G + D  +Y+ LI+ +C +G ++ +L +   M E   KP+  ++N L+  LCK R
Sbjct: 495 EMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKER 554

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           R   +LE+ + M+ +G  P+  TY  L+ G+     +  +  +L++L 
Sbjct: 555 RVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 602



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 197/420 (46%), Gaps = 65/420 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA-------------------------- 111
           ++ +A   ++RM++KG  P V+    LL  LC+                           
Sbjct: 244 RVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIG 303

Query: 112 -----NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT 166
                 K+ +A ++ E M   G  PDA +Y+ L++ LCK G +G A++L+ +ME  G+  
Sbjct: 304 GCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP 363

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N VTY  ++   C  G  + +   L+ +  KGL  N+  Y+ ++ A  K+  +  AM L+
Sbjct: 364 NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLI 423

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            ++ ++G  P++ SYN ++  LC   + EEA   F +L  +G   N ++YN ++ +L  +
Sbjct: 424 QEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRD 483

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GRW++A  L  EM     S  +V+YN LI ++   G  D +L +L+EM +   +P+  SY
Sbjct: 484 GRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSY 543

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
           N +I+ LC E +V   ++   QM ++   P+  TYN L                      
Sbjct: 544 NILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL---------------------- 581

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                       I  LC+ G  + A  LL ++      PD  TY+ LI   C   L+++A
Sbjct: 582 ------------INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 629



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 151/297 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  A   L  M  KG  P+VV  T +L+  CK         ++E M + G+  ++  Y 
Sbjct: 345 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 404

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK G +  AM L+++M   G   +  +YN+++  LC    + ++    + L+++
Sbjct: 405 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 464

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+V N  TY+ ++ A  ++     A++L  ++I  G   ++VSYN L+  +CK+G  + +
Sbjct: 465 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 524

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++  KG +PN VSYNIL+  LC E R  +A EL  +M     +P IVTYN LI  
Sbjct: 525 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 584

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           L   G    AL +L+++      P   +YN +I+  C    +D     L++     C
Sbjct: 585 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 641



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 124/210 (59%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D ++++A   ++ M S+G  PD+     ++Y LC   +M++A  + E ++  G++ +  
Sbjct: 412 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 471

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ L + G    A++L ++M  +G   + V+YN L++ +C  GN+++SL  L+ +
Sbjct: 472 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 531

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG+ PN  +Y+ L+    KER V  A++L   ++ +G  P++V+YN L+ GLCK G  
Sbjct: 532 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 591

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
             A+     L ++   P++++YNIL+   C
Sbjct: 592 HAALNLLEKLHNENVHPDIITYNILISWHC 621



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 145/316 (45%), Gaps = 5/316 (1%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P   ++ V    LC+ GR +EA+   R +   G  P+ V Y  ++ +LC +G   EA  L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L EM     +  + T++ ++  +   G+   A +++D M+     P   +Y  ++  LC 
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEF 414
             + D        M  R  + N   +N +   C   GK+ EA  + +++G K        
Sbjct: 277 VRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  ++  LC+ G+   A +LL EM K GF P+  TY+ ++   C  G+ ++   +   M 
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 392

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
                 +   +N ++  LCK  R D ++ + Q M  +G  P+  +Y  ++  + + +++E
Sbjct: 393 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 452

Query: 535 LSAEVLKELQLRQVVS 550
            +  + + L    VV+
Sbjct: 453 EAEHMFENLLEEGVVA 468



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 5/248 (2%)

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           PT  T+ +   +L   G+ D AL +L  M +    P A  Y  +I  LC +G V      
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L++M    C  +  T++ +   +CG+G+V+EA  ++  +  K        Y +++  LCR
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
             +  +A  +L  + +     +   ++++I G   EG + EA E++  M     +PD   
Sbjct: 277 VRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++ L+ GLCK  R   ++ + + M +KG  PN  TYTI++         + +  +L+E+ 
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 392

Query: 545 LRQVVSES 552
            + +   S
Sbjct: 393 AKGLTLNS 400



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 19/196 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +  DA    + M+  G   DVV    L+  +CK   + +++ ++E M   GI P+  
Sbjct: 482 RDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV 541

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++ LCK+  V  A++L ++M + G   + VTYN+L+ GLC +G ++ +L  L++L
Sbjct: 542 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 601

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + + P+  TY+ L+         H  ++LLDD          +  N  +  +C  G  
Sbjct: 602 HNENVHPDIITYNILIS-------WHCKVRLLDDAA--------MLLNRAMAAVCPVGDR 646

Query: 255 EEAIRFFRDLPSKGFE 270
               R  + LP K F+
Sbjct: 647 ----RIMQILPDKNFK 658


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/477 (30%), Positives = 229/477 (48%), Gaps = 17/477 (3%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           TR RD KLNDA      MV     P +V    LL  + K  K    I + + M   GI  
Sbjct: 59  TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  ++  ++NC C    V  A+ ++ KM   GY  + VT  SLV G C    ++ ++  +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           D++++ G  P+   Y+ ++++  K + V+ A     +I  KG +PN+V+Y  L+ GLC  
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            R  +A R   D+  K   PNV++Y+ LL +    G+  EA EL  EM      P IVTY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           + L+  L  H + D A ++ D MV         SYN +I   C   +V+  +K   +M  
Sbjct: 299 SSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 372 RRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKG 426
           R    N  TYN    G      V K QE F+ +   G     SP  + Y  ++  LC  G
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG----ISPDIWTYNILLGGLCDNG 414

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  +  +M K     D  TY+++IRG+C  G +EEA  +F  +     KPD+  + 
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            ++ GLC          ++  M ++G M N+ T   L +G     ++ LSAE++K++
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT---LSDG-----DITLSAELIKKM 523



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 205/434 (47%), Gaps = 34/434 (7%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K+  AI +   MV S   P    +  L++ + K       + L +KME  G   +  T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            ++   C    ++ +L  L ++++ G  P+  T   L+    +   V  A+ L+D ++  
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KP++V+YN ++  LCK  R  +A  FF+++  KG  PNVV+Y  L+  LC   RW +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL++M     +P ++TY+ L+ +   +GK   A ++ +EMV+    P   +Y+ ++  
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           LC   ++D   +  D M  + C  +  +YN L                            
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTL---------------------------- 336

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                 I   C+  +     +L  EM++ G   ++ TY++LI+G    G +++A E F  
Sbjct: 337 ------INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M+ +   PD+  +N LL GLC +   + +L +F+ M ++    +  TYT ++ G+    +
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 533 LELSAEVLKELQLR 546
           +E +  +   L L+
Sbjct: 451 VEEAWSLFCSLSLK 464



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 150/287 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  ++NDAF   + +  KG +P+VV  T L+  LC +++   A +++  M+   I 
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++   K G V  A +L E+M       + VTY+SLV GLC+   ++++ Q 
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQM 317

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG + +  +Y+ L+    K + V   MKL  ++  +G   N V+YN L+ G  +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A  FF  +   G  P++ +YNILL  LC  G  E+A  +  +M   +    IVT
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           Y  +I  +   GK + A  +   +     +P   +Y  +++ LC++G
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 1/320 (0%)

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           ++ +  +AI  F D+      P++V +N LL ++    +++    L  +M+       + 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+NI+I       +   AL +L +M+K  + P   +   ++   C   +V   V  +D+M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                KP+   YN +   LC   +V +AF   + +  K        Y  ++  LC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A +LL +M K   TP+  TYS+L+      G + EA E+F  M      PD+  +++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + GLC   R D + ++F +M+ KG + +  +Y  L+ G      +E   ++ +E+  R +
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 549 VSESAVERLVMQYDFEGIEV 568
           VS +     ++Q  F+  +V
Sbjct: 362 VSNTVTYNTLIQGFFQAGDV 381


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 233/470 (49%), Gaps = 1/470 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K +DA    + M+     P +V  +     +    +    +   + M  +GI  +  +
Sbjct: 43  DIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              ++NC C+     +A  ++ K+   GY  +T T+N+L+ GLC+   +++++  + R++
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PN  TY+ ++    K      A+ LL  +  +  K ++ +Y+ ++  LC++G  +
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            AI  F+++ +KG + ++V+YN L+  LC  G+W +  +LL +M      P ++T+N+LI
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 GK   A ++  EM+     P+  +YN ++   C + ++      LD M    C 
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  T+  L    C V +V E   + + +  +   +    Y  ++   C+ GK   A +L
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM   G  PD  TY  L+ GLC  G +E+ALEIF  +++     D+  +  ++ G+CK
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCK 462

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             + + +  +F  +  KG  PN  TYT+++ G+  +  L  +  +L++++
Sbjct: 463 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 512



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 225/438 (51%), Gaps = 1/438 (0%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
            C+  K   A  V+  ++  G  PD +++  L+N LC +  V  A+ LV +M + G   N
Sbjct: 110 FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPN 169

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            VTYNS+V G+C  G+ + +L  L ++ ++ +  + FTYS ++++  ++  + AA+ L  
Sbjct: 170 VVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 229

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           ++  KG K +LV+YN L+ GLCK G+  + ++  +D+ S+   PNV+++N+L+     EG
Sbjct: 230 EMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEG 289

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           + +EANEL  EM     SP  +TYN L+       +   A  +LD MV+    P   ++ 
Sbjct: 290 KLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFT 349

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            +I   C   +VD  +K   ++  R    N  TY+ L    C  GK++ A  + Q + + 
Sbjct: 350 SLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSL 409

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  ++  LC  GK  +A ++  ++ K     D   Y+ +I G+C  G +E+A
Sbjct: 410 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDA 469

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             +F  +     KP+V  +  ++ GLCK      +  + + M E G  PN+ TY  L+  
Sbjct: 470 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529

Query: 527 IAHQDELELSAEVLKELQ 544
                +L  SA++++E++
Sbjct: 530 HLRDGDLTASAKLIEEMK 547



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 214/410 (52%), Gaps = 3/410 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+  L +++  G++PD      L+  LC  +K+ +A+ ++  MV +G  P+  +Y  +VN
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            +CK G+   A+ L+ KM++     +  TY++++  LC  G ++ ++     +  KG+  
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ L+    K    +  ++LL D+ ++   PN++++NVL+    KEG+ +EA   +
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +++ +KG  PN ++YN L+   CM+ R  EAN +L  M   + SP IVT+  LI      
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D  +K+  ++ K     +  +Y+ ++   C  GK+++  +   +M      P+  TY
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418

Query: 382 NGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
            G+ +  LC  GK+++A  I + L   + +     Y  +I  +C+ GK   A+ L   + 
Sbjct: 419 -GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLP 477

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             G  P+  TY+ +I GLC +G + EA  +   MEE   +P+   +N L+
Sbjct: 478 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLI 527



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 200/415 (48%), Gaps = 36/415 (8%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + K+++A + + RMV  G +P+VV   +++  +CK+     A+ ++  M    +  D  +
Sbjct: 148 ESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFT 207

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y+ +++ LC+ G +  A+ L ++ME  G  ++ VTYNSLV GLC  G  N  +Q L  + 
Sbjct: 208 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMT 267

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL---------- 245
            + ++PN  T++ L++   KE  +  A +L  ++I KG  PN ++YN L+          
Sbjct: 268 SRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLS 327

Query: 246 -------------------------TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
                                     G CK  R +E ++ FR +  +G   N V+Y+IL+
Sbjct: 328 EANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           +  C  G+ E A EL  EM      P ++TY IL+  L  +GK + AL++ +++ K +  
Sbjct: 388 QGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMN 447

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAI 399
                Y  II  +C  GKV+        +  +  KPN  TY   ++ LC  G + EA  +
Sbjct: 448 LDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 507

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           ++ +    N      Y  +I +  R G    + +L+ EM   GF+ D+ +   +I
Sbjct: 508 LRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 167/314 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  RD  ++ A    + M +KG K  +V   +L+  LCKA K    +++++ M S  II
Sbjct: 213 DSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKII 272

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L++   K+G +  A +L ++M   G   NT+TYNSL+ G CM   L+++   
Sbjct: 273 PNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNM 332

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD +++    P+  T++ L++   K + V   MKL   I  +G   N V+Y++L+ G C+
Sbjct: 333 LDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQ 392

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E A   F+++ S G  P+V++Y ILL  LC  G+ E+A E+  ++     +  IV 
Sbjct: 393 SGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVM 452

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y I+I  +   GK + A  +   +     +P+  +Y  +I+ LC +G +      L +M 
Sbjct: 453 YTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 512

Query: 371 HRRCKPNEGTYNGL 384
               +PN+ TYN L
Sbjct: 513 EDGNEPNDCTYNTL 526



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 149/285 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + M++KG  P+ +   +L+   C  N++ +A  ++++MV +   
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++T L+   CK   V   M+L  K+   G   NTVTY+ LV+G C  G L  + + 
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  G++P+  TY  LL+       +  A+++ +D+       ++V Y +++ G+CK
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCK 462

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+A   F  LP KG +PNV++Y +++  LC +G   EAN LL +M+     P   T
Sbjct: 463 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCT 522

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           YN LI +    G    + K+++EM    F   A+S   +I  L S
Sbjct: 523 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSS 567



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 1/210 (0%)

Query: 81  DAFLQLERMVSK-GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D  ++L R +SK G   + V  + L+   C++ K++ A ++ + MVS G++PD  +Y  L
Sbjct: 362 DEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGIL 421

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++ LC  G +  A+++ E ++      + V Y  ++ G+C  G +  +      L  KG+
Sbjct: 422 LDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGV 481

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PN  TY+ ++    K+  +  A  LL  +   G +PN  +YN L+    ++G    + +
Sbjct: 482 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAK 541

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
              ++ S GF  +  S  +++  L     W
Sbjct: 542 LIEEMKSCGFSADASSIKMVIDMLSSAVWW 571



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 34/228 (14%)

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  EM++ R  PS   ++   + + S  + +LV+          CK  E   N
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLD--------FCKKME--LN 94

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           G+A           + +                  +I   CR  KT  A+ +L ++ K G
Sbjct: 95  GIA--------HNIYTL----------------NIMINCFCRCCKTCFAYSVLGKVMKLG 130

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           + PD+ T+++LI GLC+E  + EA+ +   M E   +P+V  +N+++ G+CKS  T L+L
Sbjct: 131 YEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLAL 190

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           ++ + M E+    +  TY+ +++ +     ++ +  + KE++ + + S
Sbjct: 191 DLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/492 (30%), Positives = 254/492 (51%), Gaps = 34/492 (6%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H+L +A   L+ M      P+VV   +L+  LC+A ++ +A ++ ++M  SG   D  +Y
Sbjct: 292 HRLEEAIQLLKAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITY 348

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDY-GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
             L+  LCK   +  A + VE M    G   N VT+++L++GLC  G +NQ+ +  +R++
Sbjct: 349 NILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408

Query: 196 Q-KGLVPNAFTYSFLLEAAYK---------------ERGVHAAMKL------LDDIIAKG 233
             +G+ PN FTY+FLLE   K               ER   ++         +D ++ + 
Sbjct: 409 AVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV 468

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            +P LV+YN L+TGL K G   +A+     +   G  P+V+++N +L  LC E R  +A+
Sbjct: 469 CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAH 528

Query: 294 ELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            +    ++ G R P +VTY+ LI  L+   K D AL++L +MV+   R +  +Y+ ++  
Sbjct: 529 NVFKRALERGCR-PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 587

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ---EAFAIIQSLGNKQNS 409
           L   G+++  V  L QM    C P+  TYN L  + G  K Q   EA  +++ +      
Sbjct: 588 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL--IDGFFKRQRLREAVGLLREMLEAGFH 645

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  +   LCR G+  +A ++L  M   G  P++ TYSS++ GLC  G + EAL  
Sbjct: 646 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 705

Query: 470 FVVMEEYD-YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           F  M   +   P V  ++AL+ GLCK+ R D + E  + MI  G++P+  T++IL+ G+ 
Sbjct: 706 FEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLC 765

Query: 529 HQDELELSAEVL 540
               ++   E+ 
Sbjct: 766 DAGRIDTGLELF 777



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 248/478 (51%), Gaps = 5/478 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + DA   LE M+  G  PDV+   ++L  LCK  ++  A  V +  +  G  P+  +Y+ 
Sbjct: 489 VRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 548

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ L K   +  A+QL+ KM + G   NTVTY+++V GL  +G +  ++  L ++   G
Sbjct: 549 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 608

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
            +P+A TY+ L++  +K + +  A+ LL +++  G  P++V+Y  L  GLC+ GR +EA+
Sbjct: 609 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 668

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD-RSPTIVTYNILIGS 317
                + ++G  PN ++Y+ ++  LC  GR  EA     +M   +  +P ++ Y+ LI  
Sbjct: 669 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 728

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D A + L+ M++    P   +++ +I  LC  G++D  ++    M  R CK +
Sbjct: 729 LCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKAD 788

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              YN +    C  G+   A+A+++ +     +     +  VI +LC   +  +A    +
Sbjct: 789 IYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFH 848

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            + +     D  +Y++LI  L      E+ALE+   M      PD  N+  ++ GL K+ 
Sbjct: 849 SIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAG 906

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             +++ ++ Q M  +G  P+  TYTI++ G++   +L L+ +  +E+ LR+ +   A+
Sbjct: 907 SPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEM-LRKNLKPDAI 963



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 240/454 (52%), Gaps = 4/454 (0%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           +P +V    L+  L K+  ++ A+ ++E M+ SG+ PD  ++  +++ LCK+  +  A  
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           + ++  + G   N VTY++L+ GL  +  ++++LQ L ++++ G   N  TYS +++   
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K   +  A+ +L  +   G  P+ V+YN L+ G  K  R  EA+   R++   GF P+VV
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y  L   LC  GR++EA E+L  M     +P  +TY+ ++  L   G+   AL   ++M
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709

Query: 335 VKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
            +     P   +Y+ +I  LC  G++D   + L++M      P+  T++ L   LC  G+
Sbjct: 710 ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 769

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +     +   +  +   +    Y  +I + C KG+   A+ LL EM  +G   ++ T+  
Sbjct: 770 IDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGI 829

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +I+ LC    I+EA+  F  + E D + ++ ++N L+  L  SRR++ +LE+ + M+  G
Sbjct: 830 VIKALCGNDRIDEAVSYFHSIPE-DCRDEI-SYNTLITSLVASRRSEQALELLRAMVADG 887

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             P+   Y  +++G+      E++A++L+E++ R
Sbjct: 888 GSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSR 921



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 247/559 (44%), Gaps = 98/559 (17%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DAF    + +  G +P VV  + ++  LC+ N++ K  K++E M   G  P+A +Y 
Sbjct: 16  RVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYN 75

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN L  +G    A  L+E+M   G P   +T+  +++GLC  G +  + + +D ++ +
Sbjct: 76  TLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDR 135

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G VP+   ++ LL A  +   V  A      ++  G  P+ V+YN ++ GL K GR E A
Sbjct: 136 GFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAA 195

Query: 258 -----------------------------------IRFFRDLPSKGFEPNVVSYNILLRS 282
                                                FF  +P  G  PN V+Y+ L+  
Sbjct: 196 GMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDG 255

Query: 283 LCMEG--------------------------------RWEEANELLAEMDGGDRSPTIVT 310
           LC  G                                R EEA +LL  M      P +V 
Sbjct: 256 LCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPC---VPNVVC 312

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +N L+  L    + D A ++ D M +        +YN ++  LC   ++    + ++ M 
Sbjct: 313 FNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELM- 371

Query: 371 HRR---CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRK 425
            RR   C PN  T++ L   LC  G+V +A+ + + +   +  SP  F Y +++  LC+ 
Sbjct: 372 -RRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKA 430

Query: 426 GKTYQAFQLLYEMTKYGF---------------------TPDSYTYSSLIRGLCMEGLIE 464
           G + +  Q   +M +  +                      P   TY++L+ GL   G++ 
Sbjct: 431 GDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVR 490

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +AL +   M E    PDV  FN++L GLCK +R   +  VF+  +E+G  PN  TY+ L+
Sbjct: 491 DALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 550

Query: 525 EGIAHQDELELSAEVLKEL 543
           +G++   +++ + ++L ++
Sbjct: 551 DGLSKMAKMDEALQLLAKM 569



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 232/470 (49%), Gaps = 13/470 (2%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+  LCKA ++  A       +  G  P   +Y+ +++ LC+   V    +L+E+M   G
Sbjct: 7   LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N VTYN+LV  L   G   ++   L+R+   G  P   T+  +++   KE  + AA 
Sbjct: 67  CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAF 126

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +++D+++ +G  P++  + VLL  LC+ GR +EA  FF+ +   GF P+ V+YN ++  L
Sbjct: 127 RVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL 186

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
              GR E A  +L  +     SPT+ T+ I +  L+  G    A +  D M +    P+ 
Sbjct: 187 YKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNT 246

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY---NGLAMLCGVGKVQEAFAII 400
            +Y+ +I  LC  GK+D+ +  L     R      G +   + L  LC   +++EA  ++
Sbjct: 247 VTYDALIDGLCKAGKLDIALGLL-----RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           +++    N      +  ++  LC+  +  +AF+L   M + G + D  TY+ L++GLC  
Sbjct: 302 KAMPCVPNVV---CFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKL 358

Query: 461 GLIEEALEIFVVMEEYD-YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE-KGQMPNET 518
             I EA     +M   +   P+V  F+ L+ GLC + R + + EV++ M+  +G  PN  
Sbjct: 359 RRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF 418

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGIEV 568
           TY  L+EG+    +     +  +++  R+  S S+      + DF  ++V
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV 468



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 215/434 (49%), Gaps = 11/434 (2%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK G V  A     K   +G+    VTY++++ GLC    +++  + L+ +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G  PNA TY+ L+ A   +     A  LL+ + A G  P L+++ +++ GLCKEG  
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A R   ++  +GF P+V  + +LL +LC  GR +EA     ++     +P  VTYN +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G+ + A  VL  + +    P+  ++   +  L   G +    +  D M     
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TY+ L   LC  GK+  A  +++   +K + +    +  ++  LC+  +  +A Q
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M      P+   ++SL+ GLC    ++EA E+F VM+E     DV  +N LL GLC
Sbjct: 300 LLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356

Query: 494 KSRRTDLSLEVFQMMIE-KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           K RR   +    ++M   +G  PN  T++ L++G+ +   +  + EV + +   + +S +
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416

Query: 553 AVERLVMQYDFEGI 566
              R    +  EG+
Sbjct: 417 ---RFTYAFLLEGL 427



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 239/508 (47%), Gaps = 50/508 (9%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K+++A   L +MV  G + + V  + ++  L K  +M+ A+ V+  M  +G +PDA +Y 
Sbjct: 558  KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++   K+  +  A+ L+ +M + G+  + VTY +L  GLC  G  +++++ LD +  +
Sbjct: 618  TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 677

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLL-----DDIIAKGGKPNLVSYNVLLTGLCKEG 252
            G  PNA TYS +++   K   V  A+        D+++A    P++++Y+ L+ GLCK G
Sbjct: 678  GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA----PHVIAYSALIDGLCKAG 733

Query: 253  RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
            R +EA  F   +   G  P+VV+++IL+  LC  GR +   EL   M        I  YN
Sbjct: 734  RIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYN 793

Query: 313  ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH- 371
             +I +    G+   A  +L+EM       +  ++  +I  LC   ++D  V      FH 
Sbjct: 794  AMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAV----SYFHS 849

Query: 372  --RRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                C+ +E +YN L   L    + ++A  +++++     S     Y  V+  L + G  
Sbjct: 850  IPEDCR-DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSP 908

Query: 429  YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD------- 481
              A +LL EM   G +PD  TY+ +I GL     +  A + F  M   + KPD       
Sbjct: 909  EVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSL 968

Query: 482  ---------VDN----------------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
                     VD+                ++ ++  LCK+R TD +LEV + M  K   P 
Sbjct: 969  IDAFCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPG 1028

Query: 517  ETTYTILVEGIAHQDELELSAEVLKELQ 544
               +T L      +  ++ + +++ +LQ
Sbjct: 1029 IHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 175/360 (48%), Gaps = 7/360 (1%)

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           VTYN L+ GLC  G +  +     + IQ G  P   TYS +++   ++  V    KLL++
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +  +G  PN V+YN L+  L  +GR +EA      + + G  P ++++ ++++ LC EG 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            E A  ++ EM      P +  + +L+ +L   G+ D A     +++   F P A +YN 
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQ 407
           ++  L   G+++     L  +      P   T+   +  L   G +  A+    S+    
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            S     Y  +I  LC+ GK   A  LL +          + +SSL+ GLC    +EEA+
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA---GMFAFSSLLHGLCQAHRLEEAI 298

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++   M      P+V  FN+L+ GLC++RR D + E+F +M E G   +  TY IL++G+
Sbjct: 299 QLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 243/483 (50%), Gaps = 6/483 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+ KG +P++V  T L++      + K+ +++++ M + G+ PD  +Y  L++ LCK
Sbjct: 262 FQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCK 321

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG    A +L + M   G   +   Y  ++ G    G L++   FLD ++  G+ PN + 
Sbjct: 322 KGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYI 381

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ +  A  K+  +  AM + + +  +G  PN+V+Y  L+  LCK GR ++A   F  + 
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMI 441

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           ++G  PN+V +  L+  LC   +WE+A EL  EM      P +V +N ++ +L   G+  
Sbjct: 442 NEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVM 501

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A +++D M +   RP   SYN +I   C  GK D   K LD M     KPNE TYN L 
Sbjct: 502 KAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLL 561

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G++ +A+++ Q + +   +     Y  ++  L +  +  +A +L   M   G  
Sbjct: 562 HGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQ 621

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
              YTY+ ++ GL     ++EAL++F  +   D + D+  FN ++  L K  R + ++ +
Sbjct: 622 WSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNL 681

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES-----AVERLVM 559
           F  +   G +P+ TTY ++ E +  +  LE    +  E++       S      V RL++
Sbjct: 682 FATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLL 741

Query: 560 QYD 562
           + D
Sbjct: 742 RGD 744



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 218/464 (46%), Gaps = 40/464 (8%)

Query: 104 LLYDLCKANKMKKAIKV-MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED- 161
           LL  LC A ++ +A+ V +  M   G  P+  SY  L+   C +     A++L+  M D 
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 162 --YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
                P N V+YN+++ G    G ++++      +  +G+ PN  TY+ +++   K + V
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A  +   +I KG +PN+V+Y  L+ G    G+ +E +R  +++ + G EP+  +Y +L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 280 LRSLCMEGRWEEANEL----------------------------LAEMD-------GGDR 304
           L  LC +G+  EA +L                            L+EM        G   
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           SP    +NI+  + A       A+ + ++M +    P+  +Y  +I  LC  G+VD    
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
             +QM +    PN   +  L   LC + K ++A  +   + N+       F+  ++ +LC
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            +G+  +A +L+  M + G  PD  +Y++LIRG C+ G  +EA ++  +M     KP+  
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +N LL G C+  R D +  VFQ M+  G  P   TY  ++ G+
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGL 599



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 165/308 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA L+  +M+++G  P++V  T+L+Y LC  +K +KA ++   MV+ GI P+   + 
Sbjct: 429 RVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFN 488

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC +G V  A +L++ ME  G   + ++YN+L+RG C++G  +++ + LD ++  
Sbjct: 489 TIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSV 548

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN  TY+ LL    ++  +  A  +  ++++ G  P +V+YN +L GL K  R  EA
Sbjct: 549 GLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEA 608

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              + ++ + G + ++ +YNI+L  L      +EA ++   +   D    I+T+NI+IG+
Sbjct: 609 KELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGA 668

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A+ +   +      P   +Y  I   L  EG ++       +M    C PN
Sbjct: 669 LLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPN 728

Query: 378 EGTYNGLA 385
               N L 
Sbjct: 729 SLMLNFLV 736



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 191/447 (42%), Gaps = 52/447 (11%)

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS------LQFLDRLIQ---KG 198
           +V  A++L ++   +  P + + +N L+  +        S      +   +R+I+     
Sbjct: 30  SVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSK 89

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV-LLTGLCKEGRTEEA 257
           + P+ FTYS L+    +   +         I+  G + N V     LL GLC   R  EA
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 258 IR-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRS--PTIVTYNI 313
           +    R +   G  PNVVSYN LL+  C E R EEA ELL  M DG  RS  P +V+YN 
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I      G+ D A  +  +M      P+  +Y  +I  LC    VD       QM  + 
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
            +PN  TY  L      +G+ +E   +++ + +     P  F Y  ++  LC+KGK  +A
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM-SAHGLEPDCFTYGLLLDYLCKKGKCTEA 328

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEG------------------------------ 461
            +L   M + G  PD   Y  ++ G   +G                              
Sbjct: 329 RKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCA 388

Query: 462 -----LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
                +I EA++IF  M +    P+V N+  L+  LCK  R D +   F  MI +G  PN
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPN 448

Query: 517 ETTYTILVEGIAHQDELELSAEVLKEL 543
              +T LV G+   D+ E + E+  E+
Sbjct: 449 IVVFTSLVYGLCTIDKWEKAGELFFEM 475



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 138/271 (50%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ M   G +PD++    L+   C   K  +A K++++M+S G+ P+  +Y  L++  C+
Sbjct: 507 IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCR 566

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A  + ++M   G     VTYN+++ GL      +++ +    +I  G   + +T
Sbjct: 567 DGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYT 626

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +L    K   V  A+K+   + +K  + +++++N+++  L K+GR E+A+  F  + 
Sbjct: 627 YNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATIS 686

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G  P+V +Y ++  +L  EG  EE + + +EM+    +P  +  N L+  L   G   
Sbjct: 687 ANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDIS 746

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            A   L ++ +  F   A++ + +I+    E
Sbjct: 747 RAGAYLSKIDEKNFSLEASTTSMLISLFSRE 777



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 52/300 (17%)

Query: 314 LIGSLAYHGK--TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKC 365
           +IG+ A  G    D ALK+ DE +      S  ++N ++A + S  +       +LVV C
Sbjct: 19  IIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSC 78

Query: 366 LDQMFHRRCK---PNEGTYNGL-AMLCGVGKVQEAFAIIQ-SLGNKQNSSPQEFYKYVIT 420
            ++M    C    P+  TY+ L    C +G+++  FA     L      +       ++ 
Sbjct: 79  FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLK 138

Query: 421 SLCRKGKTYQAFQ-LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI---------- 469
            LC   +  +A   LL  M++ G TP+  +Y++L++G C E   EEALE+          
Sbjct: 139 GLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVR 198

Query: 470 ----------------------------FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
                                       F+ M +    P+V  +  ++ GLCK++  D +
Sbjct: 199 SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRA 258

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
             VFQ MI+KG  PN  TYT L+ G     + +    +LKE+    +  +     L++ Y
Sbjct: 259 EGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDY 318



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 43/280 (15%)

Query: 57  SVYTKPNRKPGNNNDTRH---RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK 113
           SV  KPN      N   H   RD +++DA+   + M+S G  P VV    +L+ L K  +
Sbjct: 547 SVGLKPNE--CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRR 604

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
             +A ++   M++SG      +Y  ++N L K   V  A+++ + +       + +T+N 
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           ++  L   G    ++     +   GLVP+  TY  + E                      
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAE---------------------- 702

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
              NL+          +EG  EE    F ++   G  PN +  N L+R L + G    A 
Sbjct: 703 ---NLI----------EEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAG 749

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
             L+++D  + S    T ++LI   +   + +H  K L E
Sbjct: 750 AYLSKIDEKNFSLEASTTSMLI---SLFSREEHQAKSLPE 786


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 254/528 (48%), Gaps = 40/528 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ +++ A+     M+ +G  PDVV   +L+  LCKA  M KA+ +++ M   G++
Sbjct: 208 DGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVM 267

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  ++   C  G +  A++L++KM   G   + VTY+ L++  C +G   ++   
Sbjct: 268 PDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSV 327

Query: 191 LDRLIQKGLVPNAFTYSFLLEA----------------------------------AYKE 216
            D +++KG  PN+  Y  LL                                    AY +
Sbjct: 328 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 387

Query: 217 RG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            G V  AM    ++   G +P++VSY+ ++  LCK GR E+A+  F  + S+G  PN++S
Sbjct: 388 HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIIS 447

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +  L+  LC  G W++  EL  EM      P  +  N ++ +L   G+   A    D ++
Sbjct: 448 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI 507

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GK 392
               +P   SYN +I   C  GK+D  +K LD+M     +P+  TYN L  L G    G+
Sbjct: 508 HIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSL--LNGYFKNGR 565

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           V++A A+ + +  K           ++  L + G+   A +L  +M   G      TY++
Sbjct: 566 VEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNT 625

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           ++ GLC    ++EAL +F  +   +++ DV  F+ ++  L K  R D +  +F  M+ +G
Sbjct: 626 VLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRG 685

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            +P+  TY+++++    +  LE S  +   ++     ++S +  ++++
Sbjct: 686 PVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVR 733



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 227/474 (47%), Gaps = 6/474 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           G +   V    L+  LC  N+   A+  V   M   G  PD  SY  L+  LC +     
Sbjct: 121 GWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 180

Query: 152 AMQLVEKM-EDYGY--PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           A++L+  M  D GY    N V+YN+++ G    G ++++      ++ +GL P+  TY+ 
Sbjct: 181 ALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNS 240

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K + +  A+ +L  +  KG  P+  +YN+++ G C  G+ EEA+R  + +   G
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 300

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P+VV+Y++L++  C  GR  EA  +   M    + P    Y+IL+   A  G      
Sbjct: 301 LQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 360

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAML 387
            +LD M++        ++N +I      G VD  +    +M     +P+  +Y+  + +L
Sbjct: 361 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G+V++A      + ++  S     +  +I  LC  G+  +  +L +EM   G  PD+
Sbjct: 421 CKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 480

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
              ++++  LC EG + EA + F ++     KPDV ++N L+ G C   + D S++    
Sbjct: 481 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDR 540

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           M+  G  P+  TY  L+ G      +E +  + +E+  R+ V   A+   +M +
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREM-FRKDVKFCAITSNIMLH 593



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 158/317 (49%), Gaps = 35/317 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA     +MVS+G  P+++  T+L++ LC   + KK  ++   M++ GI PDA    
Sbjct: 425 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMN 484

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK+G V  A    + +   G   + V+YN+L+ G C +G +++S++ LDR++  
Sbjct: 485 TIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSI 544

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI---------------------------- 229
           GL P+++TY+ LL   +K   V  A+ L  ++                            
Sbjct: 545 GLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAA 604

Query: 230 -------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                  + +G +  + +YN +L GLC+    +EA+R F DL SK FE +V +++I++ +
Sbjct: 605 RELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINA 664

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           L   GR +EA  L + M      P ++TY+++I S    G  + +  +   M K      
Sbjct: 665 LLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAAD 724

Query: 343 AASYNPIIARLCSEGKV 359
           +   N I+ RL  +G V
Sbjct: 725 SHMLNIIVRRLLEKGDV 741



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 5/240 (2%)

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+ + + MV+      AA    +I   C+ G++DL             +    T N L  
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTK---Y 441
            LC   +  +A  ++     +   +P  F Y  +I  LC + K+ +A +LL  MT    Y
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
             +P+  +Y+++I G   EG +++A  +F  M      PDV  +N+L+ GLCK++  D +
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           + + Q M +KG MP+  TY I++ G     +LE +  +LK++    +  +     L++QY
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 35/265 (13%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + ++  G KPDVV    L+   C   KM ++IK ++ MVS G+ PD+ +Y  L+N   K
Sbjct: 503 FDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFK 562

Query: 146 KGNVGYAM-----------------------------------QLVEKMEDYGYPTNTVT 170
            G V  A+                                   +L  KM D G      T
Sbjct: 563 NGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIET 622

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN+++ GLC    ++++L+  + L  K    +  T+S ++ A  K   +  A  L   ++
Sbjct: 623 YNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMV 682

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +G  P++++Y++++    +EG  EE+   F  +   G   +    NI++R L  +G   
Sbjct: 683 LRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVR 742

Query: 291 EANELLAEMDGGDRSPTIVTYNILI 315
            A   L ++D  + S    T  +LI
Sbjct: 743 RAGTYLTKIDEKNFSLEASTAALLI 767



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 36/256 (14%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++++  QL+RMVS G +PD     +LL    K  +++ A+ +   M    +   A +  
Sbjct: 530 KMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSN 589

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC------------------ 179
            +++ L + G +  A +L  KM D G      TYN+++ GLC                  
Sbjct: 590 IMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 649

Query: 180 -----------------MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                             +G ++++      ++ +G VP+  TYS ++++  +E  +  +
Sbjct: 650 EFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEES 709

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             L   +   G   +    N+++  L ++G    A  +   +  K F     S   LL  
Sbjct: 710 DNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLE-ASTAALLIP 768

Query: 283 LCMEGRWEEANELLAE 298
           +  E ++++  + L E
Sbjct: 769 IVSEKKYQKEVKFLPE 784


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 227/440 (51%), Gaps = 7/440 (1%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A SYT ++  LC     G A+ L+  M+  G   + VTY +L+RGLC    L+ +L+ 
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD +   G+ PN   YS LL    +        K+ +D+  +G KP+++ +  L+  LCK
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG+T +A +    +  +G EPNVV+YN+L+ SLC EG   EA  L  EMD    +P +VT
Sbjct: 241 EGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           YN LI  L+   + D A+  L+EM++G     P   ++N +I  LC  G++   VK  + 
Sbjct: 301 YNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREM 360

Query: 369 MFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKG 426
           M  R C  N  TYN L      V KV+ A  ++  L       P  F Y  +I    +  
Sbjct: 361 MAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELA-ISGLEPDSFTYSILINGFSKMW 419

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A + L  M + G   + + Y  L+  +C +G++E A+ +F  M++ +   D   ++
Sbjct: 420 EVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYS 478

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ G CKS       ++ Q M+++G  P+  TY++L+   A   +LE +  VLK++   
Sbjct: 479 TMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTAS 538

Query: 547 QVVSESAV-ERLVMQYDFEG 565
             V + AV + L+  Y  EG
Sbjct: 539 GFVPDVAVFDSLIKGYSAEG 558



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 236/486 (48%), Gaps = 16/486 (3%)

Query: 73  RHRDH--KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           R  DH  +     + + R      +P+ V  T ++  LC + +  +A+ ++  M +SG+ 
Sbjct: 96  RGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVR 155

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L+  LC    +  A++L+++M   G   N V Y+ L+RG C  G      + 
Sbjct: 156 ADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKV 215

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + + ++G+ P+   ++ L++   KE     A K+ D ++ +G +PN+V+YNVL+  LCK
Sbjct: 216 FEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCK 275

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTI 308
           EG   EA+   +++  KG  P+VV+YN L+  L      +EA   L EM  GD    P +
Sbjct: 276 EGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDV 335

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VT+N +I  L   G+   A+KV + M +     +  +YN +I       KV + +  +D+
Sbjct: 336 VTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDE 395

Query: 369 MFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV--ITSL 422
           +     +P+  TY    NG + +  V + ++    ++  G K      E + Y+  + ++
Sbjct: 396 LAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIK-----AELFHYIPLLAAM 450

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++G   +A  L  EM K     D+  YS++I G C  G ++   ++   M +    PD 
Sbjct: 451 CQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDA 509

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             ++ L+    K    + +  V + M   G +P+   +  L++G + + + +   +++ E
Sbjct: 510 VTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHE 569

Query: 543 LQLRQV 548
           ++ + V
Sbjct: 570 MRAKNV 575


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 238/465 (51%), Gaps = 9/465 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P+ V    L+    K  +     +++E M +  I P+  SY  L+  LCK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 149 VGYAMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
              A +LV  M   G  +  + VTY++L+ G C  G + +S + L  +I +GL P+A  Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++ +  K   +  A++LL+++I  G  P L+++N L++G C+E   E A    + + +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G + +VV+YN L+  LC  GR +EA +LL  M     +P +V Y+  +  L   GK   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-CKPNEGTYNGLA 385
           A +VL++M      P+  +YN I+  LC  GK+D  ++ ++QM     C  N   Y+ + 
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC +G+ QEA ++++++           Y  ++  LC+ GK  +A + + EM   G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK-----PDVDNFNALLLGLCKSRRTD 499
           P++ TY SL+ GLC  G + EA  +   M           P V  +NAL+ GLCK+ R D
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +L+ FQ M  +G  P+  +Y+ +VEG+A       +  +L E++
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 220/422 (52%), Gaps = 9/422 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTYLVNCL 143
           LE M ++  +P+VV    LL  LCK  +  +A +++  M+S G    PD  +Y+ L++  
Sbjct: 33  LETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGY 92

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK G V  + +L++++   G   + + Y  +V  LC    L ++L+ L+ +I+ G  P  
Sbjct: 93  CKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTL 152

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            T++ L+    +E+ +  A  LL  + A G K ++V+YN L+ GLCK GR +EA +    
Sbjct: 153 ITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLER 212

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + + G  P+VV+Y+  +  LC  G+  +A+++L +M      P +VTYN ++  L   GK
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGK 272

Query: 324 TDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
            D AL+++++M        +   Y+ ++  LC  G+       ++ M    C+P+  TY+
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC  GK++EA   ++ +  +        Y  ++  LC  G+  +A +++ EM+  
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392

Query: 442 GFT-----PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           G       P   TY++LI GLC  G I++AL+ F  M      PD  +++ ++ GL +S 
Sbjct: 393 GGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452

Query: 497 RT 498
           R 
Sbjct: 453 RA 454



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 193/368 (52%), Gaps = 7/368 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ ++   L+ ++S+G +PD +  T ++  LCK+ ++ +A++++E M+ +G  P   ++ 
Sbjct: 97  KVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFN 156

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C++ N+  A  L++KM   G   + VTYN+L+ GLC  G L ++ Q L+R+   
Sbjct: 157 TLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+   YS  +    K   V  A ++L+ +      PN+V+YN +L GLCK G+ + A
Sbjct: 217 GCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA 276

Query: 258 IRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           +     + S  G   NVV Y+ ++  LC  GR +EA  ++  M      P +VTY+ L+ 
Sbjct: 277 LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM-----FH 371
            L   GK + A++ + EM     +P+A +Y  ++  LCS G++    + +++M       
Sbjct: 337 GLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGG 396

Query: 372 RRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             C P+  TYN L   LC  G++ +A    Q + ++        Y  ++  L R G+  Q
Sbjct: 397 HHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQ 456

Query: 431 AFQLLYEM 438
           A  +L E+
Sbjct: 457 AEMILSEV 464



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 161/293 (54%), Gaps = 8/293 (2%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R ++ ++ D+ LQ  +M + G K DVV    L+  LCKA ++++A +++E M +SG  PD
Sbjct: 164 REKNLEMADSLLQ--KMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +Y+  V  LCK G V  A Q++E+M D  +  N VTYN+++ GLC  G ++ +L+ ++
Sbjct: 222 VVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMME 281

Query: 193 RLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           ++    G   N   YS +++   K      A  +++ +   G +P++V+Y+ L+ GLCK 
Sbjct: 282 QMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKA 341

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS-----P 306
           G+ EEA+   R++  +G +PN V+Y  L+  LC  GR  EA  ++ EM  G        P
Sbjct: 342 GKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPP 401

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           ++ TYN LIG L   G+ D ALK    M      P   SY+ I+  L   G+ 
Sbjct: 402 SVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 184/354 (51%), Gaps = 4/354 (1%)

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PN+ T++ L+    K+       +LL+ + A+  +PN+VSYN LL GLCK  R  
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62

Query: 256 EAIRFFRDLPSKGFE--PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           EA    RD+ S+G    P++V+Y+ LL   C  G+ EE+ ELL E+      P  + Y  
Sbjct: 63  EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           ++ SL    +   AL++L+EM++    P+  ++N +I+  C E  +++    L +M    
Sbjct: 123 VVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASG 182

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            K +  TYN L   LC  G++QEA  +++ +     +     Y   +  LC+ GK   A 
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAH 242

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-YKPDVDNFNALLLG 491
           Q+L +M      P+  TY++++ GLC  G I+ ALE+   M   D    +V  ++ ++ G
Sbjct: 243 QVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           LCK  RT  +  V + M   G  P+  TY+ LV G+    ++E + E ++E+ +
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 230/462 (49%), Gaps = 4/462 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTYLVNCL 143
           L RM   G  P+ +    ++  LC  ++ ++A+ +++ M   G    PD  S+  +++  
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
            K+G V  A  L+ +M   G   + VTYNS+V  LC    ++++   L +++ KG+ P+ 
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ ++           + K+   + +KG  P +V++N  ++ LCK GR+++A   F+ 
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + +KG  P++VSY+ILL     EGR+ + N L   M           +NILI + A  G 
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+ V  EM     RP   +Y+ +I+  C  G++   ++   QM     +PN   Y+ 
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHS 514

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
           L    C  G + +A  ++  + +K    P   F+  +I SLC +G+   A  +   +   
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHI 574

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P   T++SLI G C+ G +E+A  +   M     +PDV  +N L+ G CKS + D  
Sbjct: 575 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG 634

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L +F+ M+ K   P   TY+I+++G+ H      + ++  E+
Sbjct: 635 LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEM 676



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 233/486 (47%), Gaps = 37/486 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  MV KG +PDVV   +++  LCKA  M KA  V+  MV  G+ PD  +YT +++    
Sbjct: 287 INEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSC 346

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G+   + ++  KM   G     VT+NS +  LC  G    + +    +  KG +P+  +
Sbjct: 347 SGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVS 406

Query: 206 YSFLLE----------------------------------AAYKERGV-HAAMKLLDDII 230
           YS LL                                   +A+ +RG+   AM +  ++ 
Sbjct: 407 YSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQ 466

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +G +P++V+Y+ L++  C+ GR  +A+  F  + S G EPN V Y+ L+   CM G   
Sbjct: 467 GQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLV 526

Query: 291 EANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           +A EL++EM   G   P IV ++ +I SL   G+   A  V + ++    RP+  ++N +
Sbjct: 527 KAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSL 586

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQN 408
           I   C  GK++     LD M     +P+  TYN L +  C  GK+ +   + + + +K+ 
Sbjct: 587 IDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKV 646

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  V+  L   G+T  A ++ +EM   G   D  TY  L++GLC   L +EA+ 
Sbjct: 647 KPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAIT 706

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +F  +   D K D+   N ++  L K RR + + ++F  +   G +PN +TY +++  + 
Sbjct: 707 LFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLL 766

Query: 529 HQDELE 534
            +  +E
Sbjct: 767 KEGSVE 772



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 224/463 (48%), Gaps = 10/463 (2%)

Query: 76  DHKLNDAFLQLERMVSKGHK--PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           D +  +A   ++RM  +G +  PDVV    +++   K  ++ KA  ++  MV  G+ PD 
Sbjct: 240 DSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDV 299

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  +V+ LCK   +  A  ++ +M D G   + +TY +++ G    G+  +S +   +
Sbjct: 300 VTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRK 359

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  KGL+P   T++  + +  K      A ++   +  KG  P+LVSY++LL G   EGR
Sbjct: 360 MTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGR 419

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +    F  +  KG   N   +NIL+ +    G  +EA  +  EM G    P +VTY+ 
Sbjct: 420 FADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYST 479

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI +    G+   A++   +M+     P+   Y+ +I   C  G +    + + +M  + 
Sbjct: 480 LISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKG 539

Query: 374 C-KPNEGTYNGLAM-LCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +PN   ++ +   LC  G+V +A   F ++  +G++        +  +I   C  GK 
Sbjct: 540 IPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT---FNSLIDGYCLVGKM 596

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +AF +L  M   G  PD  TY++L+ G C  G I++ L +F  M     KP    ++ +
Sbjct: 597 EKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIV 656

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           L GL  + RT  + ++F  MI+ G   +  TY IL++G+   D
Sbjct: 657 LDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRND 699



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 244/501 (48%), Gaps = 13/501 (2%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIP 131
           R R   L  AF    R++  G +   ++A   L  LC A +  +A+ V+   M   G +P
Sbjct: 168 RARRPDLGPAFFA--RLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVP 225

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +A SY  ++  LC       A+ +V++M   G     + V++N+++ G    G ++++  
Sbjct: 226 NAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 285

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            ++ ++QKG+ P+  TY+ +++A  K R +  A  +L  ++ KG +P+ ++Y  ++ G  
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
             G  +E+ + FR + SKG  P +V++N  + SLC  GR ++A E+   M      P +V
Sbjct: 346 CSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV 405

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +Y+IL+   A  G+      +   M       +   +N +I+     G +D  +    +M
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465

Query: 370 FHRRCKPNEGTYNGL-AMLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             +  +P+  TY+ L +  C +G++ +A   F+ + S+G + N+     Y  +I   C  
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTV---VYHSLIHGFCMH 522

Query: 426 GKTYQAFQLLYEMTKYGFT-PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           G   +A +L+ EM   G   P+   +SS+I  LC EG + +A ++F ++     +P +  
Sbjct: 523 GDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT 582

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           FN+L+ G C   + + +  V   M+  G  P+  TY  LV G     +++    + +E+ 
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREML 642

Query: 545 LRQVVSESAVERLVMQYDFEG 565
            ++V   +    +V+   F  
Sbjct: 643 HKKVKPTTVTYSIVLDGLFHA 663



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 167/384 (43%), Gaps = 41/384 (10%)

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR-FFRD 263
           TY  L++   + R           ++  G +   +  N  L  LC   RT+EA+      
Sbjct: 158 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHR 217

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIGSLAYH 321
           +   G  PN +SYN +++SLC + R +EA +++  M  +GG  SP +V++N +I      
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G+   A  +++EMV+    P   +YN I+  LC    +D     L QM  +  +P+  TY
Sbjct: 278 GEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTY 337

Query: 382 NGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
             +     C  G  +E+  + + + +K        +   ++SLC+ G++  A ++   MT
Sbjct: 338 TAIIHGYSCS-GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396

Query: 440 KYGFTPDSYTYSSLIRGLCMEG-----------------------------------LIE 464
             G  PD  +YS L+ G   EG                                   +++
Sbjct: 397 TKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMD 456

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+ +F  M+    +PDV  ++ L+   C+  R   ++E F  MI  G  PN   Y  L+
Sbjct: 457 EAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLI 516

Query: 525 EGIAHQDELELSAEVLKELQLRQV 548
            G     +L  + E++ E+  + +
Sbjct: 517 HGFCMHGDLVKAKELVSEMMSKGI 540



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 1/275 (0%)

Query: 86  LERMVSKG-HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           +  M+SKG  +P++V  +++++ LC   ++  A  V  +++  G  P   ++  L++  C
Sbjct: 532 VSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYC 591

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
             G +  A  +++ M   G   + VTYN+LV G C  G ++  L     ++ K + P   
Sbjct: 592 LVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV 651

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TYS +L+  +      AA K+  ++I  G   ++ +Y +LL GLC+   T+EAI  F  L
Sbjct: 652 TYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 711

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            +   + ++   N ++ +L    R EEAN+L A +      P + TY ++I +L   G  
Sbjct: 712 GAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSV 771

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           + A  +   M K    PS+   N II  L  +G +
Sbjct: 772 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDI 806



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 2/324 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDA 133
           R  +L DA  +  +M+S G +P+ V   +L++  C    + KA +++  M+S GI  P+ 
Sbjct: 486 RMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNI 545

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             ++ +++ LC +G V  A  +   +   G     VT+NSL+ G C++G + ++   LD 
Sbjct: 546 VFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDA 605

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++  G+ P+  TY+ L+    K   +   + L  +++ K  KP  V+Y+++L GL   GR
Sbjct: 606 MVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGR 665

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A + F ++   G   ++ +Y ILL+ LC     +EA  L  ++   D    I   N 
Sbjct: 666 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 725

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I +L    + + A  +   +      P+ ++Y  +I  L  EG V+        M    
Sbjct: 726 VINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSG 785

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEA 396
           C P+    N +  ML   G + +A
Sbjct: 786 CAPSSRLLNDIIRMLLQKGDIVKA 809



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 30/146 (20%), Positives = 72/146 (49%), Gaps = 1/146 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   ++A     ++ +   K D+     ++  L K  + ++A  +   + +SG++P+ S
Sbjct: 697 RNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVS 756

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ L K+G+V  A  +   ME  G   ++   N ++R L   G++ ++  ++ ++
Sbjct: 757 TYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV 816

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVH 220
               +   A T S L+ + +  +G H
Sbjct: 817 DGTIISLEASTTSLLM-SLFSSKGKH 841


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 229/472 (48%), Gaps = 5/472 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M  KG  P+    T +   LC+A +M +A    E M  +G+ PD ++ + L++   +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G++   +++ + M   G P N +TYN L+ GLC  G + ++ + L  +I  G  PN+ T
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +  L+E   +E  +  A++LLD++  +   P+ VSY  ++ GLC       A +    + 
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 376

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G +PNVV Y+ L+     EGR EEA  LL  M     +P I  YN +I  L+  GK +
Sbjct: 377 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 436

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A   L E+     +P A ++   I      GK+    K  D+M      PN   Y    
Sbjct: 437 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT--V 494

Query: 386 MLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           ++ G    G + EA +I + L         +     I  L + G+  +A ++  E+ + G
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD +TYSSLI G C +G +E+A E+   M      P++  +NAL+ GLCKS     + 
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           ++F  M EKG  P+  TY+ +++G    + +  +  +  E+  + V   S V
Sbjct: 615 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 666



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 235/489 (48%), Gaps = 3/489 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++N+A L  E M   G KPD    + L+    +   + + +++ ++MVS GI  +  
Sbjct: 221 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 280

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK G +  A ++++ M   G   N+ T+  L+ G C   N+ ++L+ LD +
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 340

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ LVP+A +Y  ++      + +  A KLL+ +   G KPN+V Y+ L+ G   EGR 
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA R    +   G  P++  YN ++  L   G+ EEA+  L E+ G    P  VT+   
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  GK   A K  DEM+     P+   Y  +I      G +   +     +     
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            P+  T +     L   G+VQEA  +   L  K    P  F Y  +I+  C++G+  +AF
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK-GLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L  EM   G  P+ + Y++L+ GLC  G I+ A ++F  M E   +PD   ++ ++ G 
Sbjct: 580 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           CKS     +  +F  M  KG  P+   Y  LV G   + ++E +  + +E+  +   +  
Sbjct: 640 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 699

Query: 553 AVERLVMQY 561
           +   L+  Y
Sbjct: 700 SFNTLIDGY 708



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 234/475 (49%), Gaps = 2/475 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE+M   G KP+VV  + L+       ++++A ++++ M  SG+ PD   Y  +++CL K
Sbjct: 372 LEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 431

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A   + +++  G   + VT+ + + G    G + ++ ++ D ++  GL+PN   
Sbjct: 432 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 491

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+   +K   +  A+ +   + A G  P++ + +  + GL K GR +EA++ F +L 
Sbjct: 492 YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 551

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+V +Y+ L+   C +G  E+A EL  EM     +P I  YN L+  L   G   
Sbjct: 552 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 611

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A K+ D M +    P + +Y+ +I   C    V        +M  +  +P+   YN L 
Sbjct: 612 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G +++A  + + +  K  ++   F   +I   C+  K  +A QL  EM      
Sbjct: 672 HGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIM 730

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY+++I   C  G +EEA  +F  M+E +   D   + +L+ G  K  ++     +
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           F+ M+ KG  P+E TY +++     +D L  + ++  E+  + ++++  +  L++
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 845



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 222/502 (44%), Gaps = 37/502 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   L  +  +G KPD V     +    K  KM +A K  + M+  G++P+   YT
Sbjct: 434 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 493

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N   K GN+  A+ +   +   G   +  T ++ + GL   G + ++L+    L +K
Sbjct: 494 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLVP+ FTYS L+    K+  V  A +L D++  KG  PN+  YN L+ GLCK G  + A
Sbjct: 554 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 613

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F  +P KG EP+ V+Y+ ++   C      EA  L  EM      P    YN L+  
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  + A+ +  EM++  F  +  S+N +I   C   K+    +   +M  ++  P+
Sbjct: 674 CCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732

Query: 378 EGTYNG-LAMLCGVGKVQEA-----------------------------------FAIIQ 401
             TY   +   C  GK++EA                                   FA+ +
Sbjct: 733 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 792

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  K     +  Y  VI + C++    +AF+L  E+   G       +  LI  LC   
Sbjct: 793 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 852

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            + EA ++   M E   KP +   + L+    ++ + D +  VF+ +   G +P+ TT  
Sbjct: 853 DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 912

Query: 522 ILVEGIAHQDELELSAEVLKEL 543
            LV G  +  + E +  ++K+L
Sbjct: 913 DLVNGNLNDTDSEDARNLIKQL 934



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 129/318 (40%), Gaps = 46/318 (14%)

Query: 275 SYNILLRSLCMEGRWEEANELLAEM-------------------DGGDRSPTIVTYNILI 315
           S++IL   LC    +  AN +L +M                   + G  SP  V ++ILI
Sbjct: 106 SFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSP--VVFDILI 163

Query: 316 GSLAYHGKTDHALKV------------------LDEMVKGRFRPSAASYNPIIARLCSEG 357
            S    G  D A  V                  L  M +    P+  +Y  I A LC   
Sbjct: 164 DSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAK 223

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGV---GKVQEAFAIIQSLGNKQNSSPQE 413
           +++      ++M     KP+   YN   A++ G    G + E   I   + +        
Sbjct: 224 RMNEAKLTFEEMQKTGLKPD---YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 280

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I  LC+ GK  +A ++L  M   G  P+S T+  LI G C E  +  ALE+   M
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 340

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           E+ +  P   ++ A++ GLC  +   L+ ++ + M   G  PN   Y+ L+ G A +  +
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400

Query: 534 ELSAEVLKELQLRQVVSE 551
           E +  +L  +    V  +
Sbjct: 401 EEARRLLDGMSCSGVAPD 418


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 242/515 (46%), Gaps = 61/515 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + DA   L+ M  +G          +L   C+    + A++ ++++ + G   D+ +   
Sbjct: 124 IADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNL 183

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V+ +C++G V   ++L+ K+  +G   + V+YN++++GLCM    +   + +  +++  
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR-- 241

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
                               VH A+  + +    G  P+L  Y  ++ G+CK+G  E A 
Sbjct: 242 --------------------VHEALSQMPE---HGCTPDLRMYATIIDGICKDGHHEVAN 278

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                +PS G +PNVV YN +L+ LC   RWEEA +LLAEM   D     VT+NIL+   
Sbjct: 279 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 338

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +G  D  +++L++M++    P   +Y  +I   C EG VD  V  L  M    CKPN 
Sbjct: 339 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT 398

Query: 379 GTYN----GLA--------------------------------MLCGVGKVQEAFAIIQS 402
            +Y     GL                                  +C  G  ++A  +++ 
Sbjct: 399 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQ 458

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +     S     Y  VI  L + GKT +A +LL  M   G TP++  YSS+   L  EG 
Sbjct: 459 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 518

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            ++ +++F  +++   + D   +NA++  LCK   TD +++ F  M+  G MPNE+TYTI
Sbjct: 519 TDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTI 578

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
           L+ G+A +  +  + ++L EL  R+ V +  V   
Sbjct: 579 LIRGLASEGLVREAQDLLSELCSRRAVRKHLVRHF 613



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 52/349 (14%)

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + L+  LC  GRT +A R    L + G    VV+YN ++   C  G+   A  L A +  
Sbjct: 48  SALIRSLCAAGRTADAARA---LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV-- 102

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV--------------------KGRFRP 341
               P   TY  ++ SL   G    AL VLDEM                      G FR 
Sbjct: 103 -PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 342 S---------------AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN---- 382
           +               + + N +++ +C +G VD  V+ L ++    C+P+  +YN    
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE-------FYKYVITSLCRKGKTYQAFQLL 435
           GL M      V+E    +  +    +  P+         Y  +I  +C+ G    A  +L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M  YG  P+   Y+++++GLC     EEA ++   M + D   D   FN L+   C++
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              D  +E+ + M+E G +P+  TYT ++ G   +  ++ +  +LK + 
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 390



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 60/138 (43%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K  +A   L  M++KG  P+ +  +++   L +  +  K I++ + +  + + 
Sbjct: 476 DGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR 535

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            DA+ Y  +++ LCK+     A+     M   G   N  TY  L+RGL   G + ++   
Sbjct: 536 SDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDL 595

Query: 191 LDRLIQKGLVPNAFTYSF 208
           L  L  +  V       F
Sbjct: 596 LSELCSRRAVRKHLVRHF 613


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 217/410 (52%), Gaps = 7/410 (1%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +++  ++  LC  G    A++L+ +M       N VTYN+++ G C  G +  +L  +  
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 97

Query: 194 LIQKG-LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKE 251
           + ++G + PN +TY  ++    K   V  A+K+ D+++ KG  KP  V YN L+ G C +
Sbjct: 98  MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ + A+ +   +  +G    V +YN+L+ +L M+GR  EA EL+ EM G   +P + TY
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI      G    AL++ + M +   R +  +Y  +I  L  +G+V    K  D+   
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277

Query: 372 RRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R  +P+   YN L       G +  AF I+  +  K+ +     Y  ++  LC  G+  +
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L+ EMTK G  PD  TY++LI G  M+G +++AL I   M    + P +  +NAL+ 
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           GLCK+ + D +  + + M+E G  P+++TY  L+EG+  +DE  +  E L
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERL 447



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 196/392 (50%), Gaps = 7/392 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDY 162
           +L  LC A K  +A++++  M      P+A +Y  ++   C +G V  A+ ++ +M E  
Sbjct: 47  MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 102

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHA 221
           G   N  TY +++ G C +G ++++++  D ++ KG V P A  Y+ L+     +  +  
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+   D ++ +G    + +YN+L+  L  +GR  EA     ++  KG  P+V +YNIL+ 
Sbjct: 163 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 222

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C EG  ++A E+   M       T+VTY  LI +L+  G+     K+ DE V+   RP
Sbjct: 223 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 282

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
               YN +I    + G +D   + + +M  +R  P++ TYN L   LC +G+V EA  +I
Sbjct: 283 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +  +        Y  +I+    KG    A ++  EM   GF P   TY++LI+GLC  
Sbjct: 343 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 402

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           G  ++A  +   M E    PD   + +L+ GL
Sbjct: 403 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 156/305 (51%), Gaps = 1/305 (0%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++A    + M++KG  KP+ V    L+   C   K+  A+   + MV  G+    ++Y
Sbjct: 123 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 182

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             LV+ L   G    A +LVE+M   G   +  TYN L+ G C  GN+ ++L+  + + +
Sbjct: 183 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+     TY+ L+ A  K+  V    KL D+ + +G +P+LV YN L+      G  + 
Sbjct: 243 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 302

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++  K   P+ V+YN L+R LC+ GR +EA +L+ EM      P +VTYN LI 
Sbjct: 303 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 362

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             +  G    AL++ +EM+   F P+  +YN +I  LC  G+ D     + +M      P
Sbjct: 363 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 422

Query: 377 NEGTY 381
           ++ TY
Sbjct: 423 DDSTY 427



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 150/279 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A L  +RMV +G    V     L++ L    +  +A +++E M   G+ PD  +Y 
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK+GNV  A+++ E M   G     VTY SL+  L   G + ++ +  D  +++
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   Y+ L+ +      +  A +++ ++  K   P+ V+YN L+ GLC  GR +EA
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +   ++  +G +P++V+YN L+    M+G  ++A  +  EM     +PT++TYN LI  
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           L  +G+ D A  ++ EMV+    P  ++Y  +I  L +E
Sbjct: 399 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 157/314 (50%), Gaps = 9/314 (2%)

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            ++N++L  LC  G+   A+   R +P     PN V+YN ++   C  GR + A +++ E
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 97

Query: 299 M-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSE 356
           M + G  +P   TY  +I      G+ D A+KV DEM+ KG  +P A  YN +I   C +
Sbjct: 98  MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF- 414
           GK+D  +   D+M  R       TYN L   L   G+  EA+ +++ +G K   +P  F 
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK-GLAPDVFT 216

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I   C++G   +A ++   M++ G      TY+SLI  L  +G ++E  ++F    
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               +PD+  +NAL+     S   D + E+   M +K   P++ TY  L+ G+     ++
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 336

Query: 535 LSAEVLKELQLRQV 548
            + +++ E+  R +
Sbjct: 337 EARKLIDEMTKRGI 350



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 155/312 (49%), Gaps = 3/312 (0%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEAN 293
           +PN V+YN ++ G C  GR + A+   R++  +G   PN  +Y  ++   C  GR +EA 
Sbjct: 69  RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 294 ELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
           ++  EM   G+  P  V YN LIG     GK D AL   D MV+     + A+YN ++  
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
           L  +G+     + +++M  +   P+  TYN L    C  G V++A  I +++  +   + 
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I +L +KG+  +  +L  E  + G  PD   Y++LI      G I+ A EI  
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 308

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            ME+    PD   +N L+ GLC   R D + ++   M ++G  P+  TY  L+ G + + 
Sbjct: 309 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368

Query: 532 ELELSAEVLKEL 543
           +++ +  +  E+
Sbjct: 369 DVKDALRIRNEM 380



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 131/243 (53%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D +  +A+  +E M  KG  PDV     L+   CK   +KKA+++ E M   G+     +
Sbjct: 192 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 251

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L+  L KKG V    +L ++    G   + V YN+L+      GN++++ + +  + 
Sbjct: 252 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 311

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K + P+  TY+ L+        V  A KL+D++  +G +P+LV+YN L++G   +G  +
Sbjct: 312 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 371

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+R   ++ +KGF P +++YN L++ LC  G+ ++A  ++ EM     +P   TY  LI
Sbjct: 372 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431

Query: 316 GSL 318
             L
Sbjct: 432 EGL 434



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 124/228 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +  A    E M  +G +  VV  T+L+Y L K  ++++  K+ +  V  GI PD  
Sbjct: 226 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 285

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+N     GN+  A +++ +ME      + VTYN+L+RGLC+LG ++++ + +D +
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 345

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P+  TY+ L+     +  V  A+++ ++++ KG  P L++YN L+ GLCK G+ 
Sbjct: 346 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 405

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           ++A    +++   G  P+  +Y  L+  L  E      +E LA  D  
Sbjct: 406 DDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 453



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF L  +M +      + T++ ++R LC  G    ALE+   M     +P+   +N ++ 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 80

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           G C   R   +L++ + M E+G + PN+ TY  ++ G      ++ + +V  E+  +  V
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 550 SESAV 554
              AV
Sbjct: 141 KPEAV 145


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 228/458 (49%), Gaps = 1/458 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K N+A      +  KG  P++     +L    K N+ + A  +   M    I     ++ 
Sbjct: 161 KPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFN 220

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N LCK+G +  A + +  ME  G   N VTYN+++ G C+ G   ++      +  K
Sbjct: 221 IMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDK 280

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+ +TY+  +    KE  +  A  L+  ++  G  PN V+YN L+ G C +G  ++A
Sbjct: 281 GLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKA 340

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             +  ++ SKG   ++V+YN+ + +L MEGR  +A+ ++ EM      P  VT+NILI  
Sbjct: 341 YAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILING 400

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A  +LDEMV    +P+  +Y  +I  L    ++        ++      P+
Sbjct: 401 YCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPD 460

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              +N L    C  G +  AF +++ + N +    +  Y  ++   CR+GK  +A QLL 
Sbjct: 461 IIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLD 520

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM + G  PD  +Y++LI G    G +++A  +   M    + P +  +NAL+ GLCK++
Sbjct: 521 EMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQ 580

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             + + E+ + M+ KG  P+++TY  ++E +   D+LE
Sbjct: 581 EGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 197/384 (51%), Gaps = 1/384 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL  A   +  M + G KP+VV    +++  C   K ++A  + + M   G+ PD  
Sbjct: 228 KEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCY 287

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y   ++ LCK+G +  A  L+ KM + G   N VTYN+L+ G C  G+L+++  + D +
Sbjct: 288 TYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEM 347

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I KG++ +  TY+  + A + E  +  A  ++ ++  KG  P+ V++N+L+ G C+ G  
Sbjct: 348 ISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDA 407

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A     ++  KG +P +V+Y  L+  L    R +EA+ L +++      P I+ +N L
Sbjct: 408 KRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNAL 467

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     +G  D A ++L EM   +  P   +YN ++   C EGKV+   + LD+M  R  
Sbjct: 468 IDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGI 527

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+  +YN L +     G +++AF +   +           Y  +I  LC+  +   A +
Sbjct: 528 KPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEE 587

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGL 457
           LL EM   G TPD  TY S+I  +
Sbjct: 588 LLKEMVSKGITPDDSTYLSIIEAM 611


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 237/481 (49%), Gaps = 1/481 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++++AF   + M  KG   DV   + L+    K  +  +A  ++E M S G+ P   
Sbjct: 283 RAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV 342

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++   ++G+ G A ++ E+M   G   N  TYN+LV+G+C  G++ ++   L+ +
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I  G+ P+  TY+ ++E   KE+       LL ++      P   +  +++ GLC+ G  
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A R F  + S G +PN V Y  L++    EGR++EA  +L  MD     P ++ YN +
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K + A   L EM++   +P+  +Y  +I   C  G++ +  +   +M     
Sbjct: 523 IIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGI 582

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN+     L    C  G   EA +I + +  +        Y  +I  L R GK   A +
Sbjct: 583 APNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAME 642

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL E  + G  PD +TY+S+I G C +G I +A ++   M +    P++  +NAL+ GLC
Sbjct: 643 LLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLC 702

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K+   + + E+F  +  KG   N  TY  +++G      L  +  +  E+ L+ V  +S 
Sbjct: 703 KAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSF 762

Query: 554 V 554
           V
Sbjct: 763 V 763



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 229/465 (49%), Gaps = 2/465 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M+  G KPD     N++    K     +   ++  M  S ++P A +   ++N LC+
Sbjct: 399 LNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCR 458

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G++  A ++ E M   G   N V Y +L++G    G   ++++ L  + +KG+ P+   
Sbjct: 459 HGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLC 518

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++    K R +  A   L ++I +G KPN+ +Y  L+ G CK G  + A R+F+++ 
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML 578

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PN V    L+   C EG   EA  +   M G    P + TY+ LI  L  +GK  
Sbjct: 579 GCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQ 638

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+++L E ++    P   +YN II+  C +G +    +  + M  +   PN  TYN L 
Sbjct: 639 GAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALI 698

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  G+++ A  +   +  K  +     Y  +I   C+ G   +AF+L  EMT  G  
Sbjct: 699 NGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVP 758

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PDS+ YS+LI G   EG  E+AL +F+   +  +     + NAL+ G CKS +   + ++
Sbjct: 759 PDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQL 817

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            + M++K   P+  TYTIL++       L+ + +   ++Q R ++
Sbjct: 818 LEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLM 862



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 225/449 (50%), Gaps = 1/449 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LL DL KANK++   +    M+ + ++ D  +YT+L+N   + GN     +L+ +ME+ G
Sbjct: 207 LLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKG 266

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              + VTYN ++ GLC  G ++++ +    + +KGLV + FTYS L++   K++    A 
Sbjct: 267 CSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAK 326

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            +L+++ +KG KP  V+Y  L+ G  ++G + EA R   ++ ++G + N+ +YN L++ +
Sbjct: 327 LMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGV 386

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G  E+A+ LL EM      P   TYN +I        T     +L EM K    P+A
Sbjct: 387 CKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTA 446

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
            +   II  LC  G ++   +  + M     KPN   Y  L       G+ QEA  I++ 
Sbjct: 447 YTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKV 506

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  K        Y  VI  LC+  K  +A   L EM + G  P+ YTY +LI G C  G 
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++ A   F  M      P+     AL+ G CK   T  +  +F+ M+ +   P+  TY+ 
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSA 626

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSE 551
           L+ G+    +L+ + E+L E   + +V +
Sbjct: 627 LIHGLLRNGKLQGAMELLSEFLEKGLVPD 655



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 228/490 (46%), Gaps = 3/490 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +  +A L LE M SKG KP  V  T L+    +     +A +V E M++ G+ 
Sbjct: 314 DGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVK 373

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  +Y  LV  +CK G++  A  L+ +M   G   +T TYN+++ G     N ++    
Sbjct: 374 LNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDL 433

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + +  LVP A+T   ++    +   +  A ++ + +++ G KPN V Y  L+ G  +
Sbjct: 434 LSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQ 493

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EGR +EA+R  + +  KG +P+V+ YN ++  LC   + EEA + L EM      P + T
Sbjct: 494 EGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYT 553

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI      G+   A +   EM+     P+      +I   C EG           M 
Sbjct: 554 YGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCML 613

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKT 428
            R   P+  TY+ L   L   GK+Q A  ++     K    P  F Y  +I+  C++G  
Sbjct: 614 GRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK-GLVPDVFTYNSIISGFCKQGGI 672

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +AFQL   M + G +P+  TY++LI GLC  G IE A E+F  +       +   +  +
Sbjct: 673 GKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + G CKS     +  +F  M  KG  P+   Y+ L++G   +   E +  +  E   +  
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF 792

Query: 549 VSESAVERLV 558
            S S++  L+
Sbjct: 793 ASTSSLNALM 802



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 224/481 (46%), Gaps = 4/481 (0%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            +  K+ +A   L  M+ +G KP+V     L++  CK+ +M+ A +  + M+  GI P+  
Sbjct: 528  KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV 587

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
              T L++  CK+G+   A  +   M       +  TY++L+ GL   G L  +++ L   
Sbjct: 588  VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++KGLVP+ FTY+ ++    K+ G+  A +L + +  KG  PN+++YN L+ GLCK G  
Sbjct: 648  LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            E A   F  +P KG   N V+Y  ++   C  G   +A  L  EM      P    Y+ L
Sbjct: 708  ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
            I      G T+ AL +  E V+  F  S +S N ++   C  GKV    + L+ M  +  
Sbjct: 768  IDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHV 826

Query: 375  KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            KP+  TY  L    C  G ++EA      +  K+N  P    Y  +++     G+  + F
Sbjct: 827  KPDHVTYTILIDYHCKTGFLKEAEQFFVDM-QKRNLMPNALTYTALLSGYNMAGRRSEMF 885

Query: 433  QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             L  EM      PD  T+S +I     EG   + L++   M +       +  + L+  L
Sbjct: 886  ALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPL 945

Query: 493  CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            C+       L+V + + E+G   +  T + LV       +++ +A VLK +   + V +S
Sbjct: 946  CRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDS 1005

Query: 553  A 553
             
Sbjct: 1006 T 1006



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 216/459 (47%), Gaps = 4/459 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   + DA    E MVS G KP+ V  T L+    +  + ++A++++++M   G+ PD  
Sbjct: 458 RHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVL 517

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  ++  LCK   +  A   + +M + G   N  TY +L+ G C  G +  + ++   +
Sbjct: 518 CYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM 577

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ PN    + L++   KE     A  +   ++ +   P++ +Y+ L+ GL + G+ 
Sbjct: 578 LGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+    +   KG  P+V +YN ++   C +G   +A +L   M     SP I+TYN L
Sbjct: 638 QGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNAL 697

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+ + A ++ D +       +A +Y  II   C  G +    +  D+M  +  
Sbjct: 698 INGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV 757

Query: 375 KPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+   Y+ L   C   G  ++A ++      K  +S       ++   C+ GK  +A Q
Sbjct: 758 PPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSGKVIEANQ 816

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL +M      PD  TY+ LI   C  G ++EA + FV M++ +  P+   + ALL G  
Sbjct: 817 LLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYN 876

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
            + R      +F  MI K   P+  T++++++  AH  E
Sbjct: 877 MAGRRSEMFALFDEMIAKDIEPDGVTWSVMID--AHLKE 913



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 221/470 (47%), Gaps = 3/470 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +  +A   L+ M  KG +PDV+   +++  LCK+ KM++A   +  M+  G+ P+  
Sbjct: 493 QEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVY 552

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK G +  A +  ++M   G   N V   +L+ G C  G+  ++      +
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + + + P+  TYS L+    +   +  AM+LL + + KG  P++ +YN +++G CK+G  
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGI 672

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A +    +  KG  PN+++YN L+  LC  G  E A EL   + G   +   VTY  +
Sbjct: 673 GKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G    A ++ DEM      P +  Y+ +I     EG  +  +    +   +  
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF 792

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                    +   C  GKV EA  +++ + +K        Y  +I   C+ G   +A Q 
Sbjct: 793 ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M K    P++ TY++L+ G  M G   E   +F  M   D +PD   ++ ++    K
Sbjct: 853 FVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
                 +L++   M++KG   ++    +L++ +  ++ +   +EVLK L+
Sbjct: 913 EGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHV---SEVLKVLE 959



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 200/411 (48%), Gaps = 5/411 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L++   KKG    A+      +  G+    +  N L+  L     L    +F + ++
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +  ++ + +TY+ L+ A ++        +LL ++  KG  P+LV+YNV++ GLC+ G  +
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA    + +  KG   +V +Y+IL+     + R  EA  +L EM      P  V Y  LI
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G +  A +V +EM+    + +  +YN ++  +C  G ++     L++M     K
Sbjct: 349 DGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLG--NKQNSSPQEFY-KYVITSLCRKGKTYQAF 432
           P+  TYN   M+ G  K Q    +   L    K N  P  +    +I  LCR G    A 
Sbjct: 409 PDTQTYNN--MIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++   M   G  P++  Y++LI+G   EG  +EA+ I  VM++   +PDV  +N++++GL
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           CKSR+ + + +    MIE+G  PN  TY  L+ G     E++++    KE+
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM 577



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 3/273 (1%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            L+ AF   + M  KG  PD    + L+    K    +KA+ +    V  G     SS   
Sbjct: 742  LSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNA 800

Query: 139  LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            L++  CK G V  A QL+E M D     + VTY  L+   C  G L ++ QF   + ++ 
Sbjct: 801  LMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRN 860

Query: 199  LVPNAFTYSFLLEAAYKERGVHAAM-KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L+PNA TY+ LL + Y   G  + M  L D++IAK  +P+ V+++V++    KEG   + 
Sbjct: 861  LMPNALTYTALL-SGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKT 919

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            ++   D+  KG   +    ++L+  LC +    E  ++L +++    + ++ T + L+  
Sbjct: 920  LKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRC 979

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
                GK D A +VL  MV+ ++ P +   N +I
Sbjct: 980  FHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 263/589 (44%), Gaps = 48/589 (8%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYG--FYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSV 58
           +A  L  V  L + SP P R  +   F S + +L  F+L    +R+ A       P  + 
Sbjct: 94  LAVALPVVLRLHSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTA 153

Query: 59  YTKPNRKPGNNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKK 116
                  P  N   R   R   L  A   L  MV  G +PD     +L+   C+ N++  
Sbjct: 154 -------PTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDV 206

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL--------------------- 155
           A  + + M   G   D  SY  L+  LC+ G +  A++L                     
Sbjct: 207 ARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCN 266

Query: 156 ----------VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                     + +M++ G+  +T  Y ++V   C      ++ + L  + +KGL P   T
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            + ++ A  KE  +  A+++L+ +  +G KPN+ +YN L+ G C EG+  +A+     + 
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G  P+ V+YN+L+R  C++G  E A  LL  M+G        TYN LI +L   G+TD
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A  + D +     +P+A ++N +I  LC  GK D+  K L++M    C P+  TY+  +
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC +   QE  + I  +  K        Y  VI  L ++       +   EM   G  
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 566

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY++ +R  C+EG + EA  + + M +     D   +N L+ G     +TD ++ +
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 626

Query: 505 FQMMIEKGQMPNETTYTILVEGIAH----QDELELS-AEVLKELQLRQV 548
            + M     +PN+ TY IL+  +      +D L L+ A V K ++L  V
Sbjct: 627 LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDV 675



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 229/472 (48%), Gaps = 18/472 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++ A   L +M + G  PD V    L+   C    ++ A +++ +M   G+I D  +Y 
Sbjct: 374 KVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 433

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK G    A  L + +E  G   N VT+NSL+ GLC  G  + + +FL++++  
Sbjct: 434 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 493

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+ +TYS  +E   K +G    +  + +++ K  KP+ V+Y +++  L KE      
Sbjct: 494 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 553

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R + ++ S G  P+VV+Y   +R+ C+EGR  EA  +L EM     +   + YN L+  
Sbjct: 554 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 613

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC------------ 365
            A  G+TDHA+ +L +M      P+  +Y  ++  L     V+ V+              
Sbjct: 614 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 673

Query: 366 -----LDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                 D M      PN GTY+  L      G+ +EA +++  +     S  ++ Y  ++
Sbjct: 674 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 733

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
           T  C+  +   A+ L+  M ++GF P   +Y  L+ GL  EG  ++A EIF+     DY 
Sbjct: 734 TCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 793

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           PD   +  ++ GL K   +D+S E+  M+      P+  TY +L E +  ++
Sbjct: 794 PDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDRE 845



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 237/507 (46%), Gaps = 18/507 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D R R+ K  +A   L+ M  KG  P VV  T ++   CK  +M  A++V+E+M   G  
Sbjct: 297 DFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 356

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  LV   C +G V  AM L+ KM   G   + VTYN L+RG C+ G++  + + 
Sbjct: 357 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 416

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   GL+ + +TY+ L+ A  K+     A  L D +  +G KPN V++N L+ GLCK
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A +F   + S G  P+  +Y+  +  LC     +E    + EM   D  P+ V 
Sbjct: 477 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 536

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y I+I  L          +   EMV     P   +Y   +   C EG+++     L +M 
Sbjct: 537 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 596

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR----- 424
                 +   YN L      +G+   A +I++ + +  +   Q  Y  ++  L R     
Sbjct: 597 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVE 656

Query: 425 ------KGKTYQAFQL-----LYE-MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                     ++A +L     L++ M K  F P+S TYSS++ G   +G  EEA  +  +
Sbjct: 657 DVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSL 716

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M+E     + D + AL+   CKS+R   +  +   MI+ G +P   +Y  L+ G+  + +
Sbjct: 717 MKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQ 776

Query: 533 LELSAEVLKELQLRQVVSESAVERLVM 559
            + + E+    + +    +  V ++++
Sbjct: 777 TDKAKEIFMNSRWKDYSPDEIVWKVII 803



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 224/462 (48%), Gaps = 18/462 (3%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +  L L RM   G +P       ++   C+  K K+A ++++ M   G+ P   + T ++
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 331

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N  CK+G +  A++++E M+  G   N  TYN+LV+G C  G +++++  L+++   G+ 
Sbjct: 332 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 391

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+A TY+ L+     +  + +A +LL  +   G   +  +YN L+  LCK+GRT++A   
Sbjct: 392 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 451

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  L ++G +PN V++N L+  LC  G+ + A + L +M     +P   TY+  I  L  
Sbjct: 452 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 511

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
              +   L  + EM++   +PS  +Y  +I +L  E    LV +   +M    C P+  T
Sbjct: 512 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 571

Query: 381 Y-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y   +   C  G++ EA  ++  +     +     Y  ++      G+T  A  +L +MT
Sbjct: 572 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 631

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALE-----------------IFVVMEEYDYKPDV 482
                P+ +TY  L+R L    L+E+ L                  +F VM++ ++ P+ 
Sbjct: 632 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 691

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
             ++++L G  +  RT+ +  +  +M E     NE  YT LV
Sbjct: 692 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 733



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 5/257 (1%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           +PT  TYN +I SL        AL+ L  MV+  +RP A ++N +I   C   +VD+   
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
             D+M  R    +  +Y  L   LC  G++ EA  +      + +      Y  ++  LC
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF----GEMDQPDMHMYAALVKGLC 265

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
              +  +   +L  M + G+ P +  Y++++   C E   +EA E+   M E    P V 
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              A++   CK  R   +L V ++M  +G  PN  TY  LV+G  ++ ++  +  +L ++
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 544 QLRQVVSESAVERLVMQ 560
           +   V  ++    L+++
Sbjct: 386 RACGVNPDAVTYNLLIR 402


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 237/483 (49%), Gaps = 2/483 (0%)

Query: 64  RKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA-IKVME 122
           R    N+D       ++DA      M+ +   P ++Q   LL  + +  +   A I + +
Sbjct: 56  RYKHKNDDASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSK 115

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
            M  +G+ P+  +   L+NC C   +V     ++ K+   G     +T+ +L+ GLC  G
Sbjct: 116 QMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAG 175

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
              Q+L+  D ++ +G  P+ +TY+ ++    K     AA  L+  +   G +P++V+Y+
Sbjct: 176 EFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYS 235

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            L+  LCK+    EA+  F  + +KG  P VVSY  L++ LC   RW+EA+ +L EM   
Sbjct: 236 TLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL 295

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           +  P IVT+++LI      G    A  VL  M +    P+  +YN ++     + +V   
Sbjct: 296 NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEA 355

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            K  D M  R CKP+  +Y+ L    C V ++ EA  +   + ++  +     Y  +I +
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            C+ GK  +A +L  +M   G+ PD  TYS L+ G C +G + +A  +F  M+    KP+
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           +  +  L+  +CKS   + + ++F  +   G  P+   YT ++ G+  +  L+ + E  +
Sbjct: 476 LVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFR 535

Query: 542 ELQ 544
           +++
Sbjct: 536 KME 538



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 222/439 (50%), Gaps = 1/439 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            F  L +++  G +P ++  T L+  LCKA +  +A+++ + MV+ G  PD  +YT ++N
Sbjct: 145 GFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIIN 204

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G    A  L++KM + G   + VTY++L+  LC    +N++L     +  KG+ P
Sbjct: 205 GLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISP 264

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
              +Y+ L++          A  +L+++ +    P++V++++L+   CKEG   EA    
Sbjct: 265 TVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVL 324

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           + +   G EPNV++YN L+    ++    EA +L   M      P + +Y+ILI      
Sbjct: 325 KTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMV 384

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D A ++ +EM+     P+  SY  +I   C  GK+    +    M      P+  TY
Sbjct: 385 KRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTY 444

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           +  L   C  G + +AF + +++           Y  +I S+C+ G    A +L  E+  
Sbjct: 445 SVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFV 504

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
           +G  PD   Y+++I GLC EGL++EALE F  MEE    P+  ++N ++ G  + +    
Sbjct: 505 HGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESR 564

Query: 501 SLEVFQMMIEKGQMPNETT 519
           ++++   M +KG + +E T
Sbjct: 565 AVQLIGEMRDKGFVADEGT 583



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 167/312 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  +N+A      M +KG  P VV  T+L+  LC  ++ K+A  ++  M S  I+
Sbjct: 239 DSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIM 298

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++ L++  CK+GNV  A  +++ M + G   N +TYNSL+ G  +   + ++ + 
Sbjct: 299 PDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKL 358

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I +G  P+ F+YS L+      + +  A +L +++I +G  PN VSY  L+   C+
Sbjct: 359 FDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQ 418

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA   F+D+ + G+ P++ +Y++LL   C +G   +A  L   M G    P +V 
Sbjct: 419 LGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVM 478

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ILI S+   G  +HA K+  E+     +P    Y  II  LC EG +D  ++   +M 
Sbjct: 479 YTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKME 538

Query: 371 HRRCKPNEGTYN 382
              C PNE +YN
Sbjct: 539 EDGCPPNEFSYN 550



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 97/192 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A      M+ +G  P+ V  T L++  C+  K+++A ++ + M ++G +PD  +Y+
Sbjct: 386 RIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYS 445

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK+G +G A +L   M+      N V Y  L+  +C  GNLN + +    L   
Sbjct: 446 VLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVH 505

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+   Y+ ++    KE  +  A++    +   G  PN  SYNV++ G  +      A
Sbjct: 506 GLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRA 565

Query: 258 IRFFRDLPSKGF 269
           ++   ++  KGF
Sbjct: 566 VQLIGEMRDKGF 577



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  AF     M     KP++V  T L+  +CK+  +  A K+   +   G+ PD   YT 
Sbjct: 457 LGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTT 516

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LCK+G +  A++   KME+ G P N  +YN ++RG     + ++++Q +  +  KG
Sbjct: 517 IINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576

Query: 199 LVPNAFTYSF 208
            V +  T ++
Sbjct: 577 FVADEGTTAW 586



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 43/94 (45%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +   LN A      +   G +PDV   T ++  LCK   + +A++    M   G  
Sbjct: 484 DSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCP 543

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY 164
           P+  SY  ++    +  +   A+QL+ +M D G+
Sbjct: 544 PNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGF 577


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 256/528 (48%), Gaps = 40/528 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ +++ A+   + M+ +G  PDVV  ++L+  LCKA  M KA  +++ M   G++
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM 270

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  ++   C  G +  A++L++KM   G   + VTY  L++  C +G   ++   
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330

Query: 191 LDRLIQKGLVPNAFTYSFLLEA----------------------------------AYKE 216
            D +++KG  PN+  Y  LL                                    AY +
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 390

Query: 217 RG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            G V  AM    ++   G +P++VSY+ ++  LCK GR E+A+  F  + S+G  PN++S
Sbjct: 391 HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIIS 450

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +  L+  LC  G W++  EL  EM      P  +  N ++ +L   G+   A    D ++
Sbjct: 451 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI 510

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GK 392
               +P+  SYN +I   C  GK+D  +K  D+M     +P+  TYN  A+L G    G+
Sbjct: 511 HIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYN--ALLNGYFKNGR 568

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           V++A A+ + +  K           ++  L + G+   A +L  +M   G      TY++
Sbjct: 569 VEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNT 628

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           ++ GLC    ++EAL +F  +   +++ DV  FN ++  L K  R D +  +F  M+ +G
Sbjct: 629 VLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRG 688

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            +P+  TY+++++    +  LE S ++   ++     ++S +  ++++
Sbjct: 689 PVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIR 736



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 221/461 (47%), Gaps = 5/461 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           G +   V    L+  LC   +   A+  V   M   G  PD  SY  L+  LC +     
Sbjct: 124 GWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 183

Query: 152 AMQLVEKM-EDYGY--PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           A++L+  M  D GY    N V+Y++++ G    G ++++    D +I +G  P+  TYS 
Sbjct: 184 ALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSS 243

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K + ++ A  +L  +  KG  PN  +YN+++ G C  G+ EEA+R  + +   G
Sbjct: 244 LIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P+VV+Y +L++  C  GR  EA  +   M    + P    Y+IL+   A  G      
Sbjct: 304 LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 363

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAML 387
            +LD M++        ++N +I      G VD  +    +M     +P+  +Y+  + +L
Sbjct: 364 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 423

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C +G+V++A      + ++  S     +  +I  LC  G+  +  +L +EM   G  PD+
Sbjct: 424 CKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 483

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
              ++++  LC EG + EA + F ++     KP+V ++N L+ G C   + D S++ F  
Sbjct: 484 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDR 543

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           M+  G  P+  TY  L+ G      +E +  + +E+  + V
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDV 584



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 157/317 (49%), Gaps = 35/317 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA     +MVS+G  P+++  T+L++ LC   + KK  ++   M++ GI PDA    
Sbjct: 428 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMN 487

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK+G V  A    + +   G   N V+YN+L+ G C +G +++S++  DR++  
Sbjct: 488 TIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSI 547

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI---------------------------- 229
           GL P+++TY+ LL   +K   V  A+ L  ++                            
Sbjct: 548 GLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAA 607

Query: 230 -------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                  + +G +  + +YN +L GLC+    +EA+R F DL SK FE +V ++NI++ +
Sbjct: 608 RELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINA 667

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           L   GR +EA  L + M      P ++TY+++I S    G  + +  +   M K      
Sbjct: 668 LLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAAD 727

Query: 343 AASYNPIIARLCSEGKV 359
           +   N II RL  +G V
Sbjct: 728 SHMLNVIIRRLLEKGDV 744



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 5/218 (2%)

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I   C+ G++DL             +    T N L   LC   +  +A  ++     + 
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159

Query: 408 NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTK---YGFTPDSYTYSSLIRGLCMEGLI 463
             +P  F Y  +I  LC + K+ +A +LL  MT    Y  +P+  +YS++I G   EG +
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           ++A  +F  M    + PDV  +++L+ GLCK++  + +  + Q M +KG MPN  TY I+
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           + G     +LE +  +LK++    +  +     L++QY
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQY 317



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 115/238 (48%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++++  Q +RMVS G +PD      LL    K  +++ A+ +   M    +   A +  
Sbjct: 533 KMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSN 592

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ L + G +  A +L  KM D G      TYN+++ GLC    ++++L+  + L  K
Sbjct: 593 IILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 652

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               + +T++ ++ A  K   +  A  L   ++ +G  P++++Y++++    +EG  EE+
Sbjct: 653 EFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEES 712

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
              F  +   G   +    N+++R L  +G    A   L ++D  + S    T  +LI
Sbjct: 713 DDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/224 (19%), Positives = 100/224 (44%), Gaps = 1/224 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ DA      M  K  K   + +  +L+ L +A ++  A ++   MV  G      
Sbjct: 565 KNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIE 624

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  LC+   V  A+++ E +    +  +  T+N ++  L  +G ++++      +
Sbjct: 625 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAM 684

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G VP+  TYS ++++  +E  +  +  L   +   G   +    NV++  L ++G  
Sbjct: 685 VLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDV 744

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
             A  +   +  K F     S   LL  +  E ++++  + L E
Sbjct: 745 RRAGTYLTKIDEKNFSVE-ASTAALLIPIVSEKKYQKEVKFLPE 787



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 431 AFQLLYEMTKYG---FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
           A  L   M + G      + Y    LIR  C  G ++ A   F +  +  ++      N 
Sbjct: 75  AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134

Query: 488 LLLGLCKSRRTDLSLE-VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           L+ GLC  +RTD +++ VF+ M E G  P+  +Y  L++G+  + + + + E+L
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELL 188


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 226/438 (51%), Gaps = 1/438 (0%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
            C+  K+  A  V+   +  G  P+  +++ L+N  C +G V  A+ LV++M +  Y  N
Sbjct: 114 FCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPN 173

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            VT N+L+ GLC+ G + ++L  +DR+++ G   N  TY  +L    K      A+ L  
Sbjct: 174 VVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFR 233

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            +  +  K ++V Y++++  LCK+G  ++A+  F ++  KG + +VV+Y+ ++  LC +G
Sbjct: 234 KMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDG 293

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           RW++  ++L EM G +  P +VT++ LI      GK   A ++ +EMV     P   +Y+
Sbjct: 294 RWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYS 353

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNK 406
            +I   C E ++    + LD M  + C+PN  TY+ L    C   +V     +   + +K
Sbjct: 354 SLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSK 413

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
              +    Y  ++   C+ GK   A +L  EM   G  P   TY  L+ GLC  G +++A
Sbjct: 414 GLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKA 473

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           LEIF  M++      +  +N ++ G+C + + D +  +F  +  KG  P+  TY +++ G
Sbjct: 474 LEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGG 533

Query: 527 IAHQDELELSAEVLKELQ 544
           +  +  L  +  + ++++
Sbjct: 534 LCKKGSLSEADMLFRKMK 551



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 243/486 (50%), Gaps = 1/486 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL  AF  + R +  G +P+ +  + L+   C   ++ +A+ +++ MV     P+  
Sbjct: 116 RKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVV 175

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N LC KG V  A+ L+++M  YG   N +TY  ++  +C  GN   +L    ++
Sbjct: 176 TVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKM 235

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ +  +   YS ++++  K+  +  A+ L +++  KG K ++V+Y+ ++ GLC +GR 
Sbjct: 236 EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRW 295

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++  +  R++  +   PNVV+++ L+     EG+  EA EL  EM     +P  +TY+ L
Sbjct: 296 DDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSL 355

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       +   A ++LD MV     P+  +Y+ +I   C   +VD  ++   ++  +  
Sbjct: 356 IDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL 415

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TYN L    C  GK+  A  + Q + ++        Y  ++  LC  G+  +A +
Sbjct: 416 VADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALE 475

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  +M K         Y+ +I G+C    +++A  +F  +     KPDV  +N ++ GLC
Sbjct: 476 IFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLC 535

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K      +  +F+ M E G  P++ TY IL+        +  S E+++E+++R   ++++
Sbjct: 536 KKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADAS 595

Query: 554 VERLVM 559
             ++V+
Sbjct: 596 TIKMVV 601



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 208/421 (49%), Gaps = 3/421 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A + ++RMV  G + + +    +L  +CK+     A+ +   M    I      Y+
Sbjct: 189 RVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYS 248

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK GN+  A+ L  +ME  G   + V Y+S++ GLC  G  +   + L  +I +
Sbjct: 249 IVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++PN  T+S L++   KE  +  A +L ++++A+G  P+ ++Y+ L+ G CKE R  EA
Sbjct: 309 NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEA 368

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +    + SKG EPN+V+Y+IL+ S C   R +    L  E+         VTYN L+  
Sbjct: 369 NQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQG 428

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK + A ++  EMV     PS  +Y  ++  LC  G++   ++  ++M   R    
Sbjct: 429 FCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILG 488

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            G YN +   +C   KV +A+++  SL  K        Y  +I  LC+KG   +A  L  
Sbjct: 489 IGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFR 548

Query: 437 EMTKYGFTPDSYTYSSLIRG-LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           +M + G  P   TY+ LIR  L   G+I  ++E+   M+   +  D      +++ L   
Sbjct: 549 KMKEDGCAPSDCTYNILIRAHLGGSGVI-SSVELIEEMKMRGFAADASTIKMVVVMLSDG 607

Query: 496 R 496
           R
Sbjct: 608 R 608



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 181/363 (49%), Gaps = 5/363 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  L+DA      M  KG K DVV  ++++  LC   +     K++  M+   II
Sbjct: 252 DSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNII 311

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +++ L++   K+G +  A +L  +M   G   +T+TY+SL+ G C    L ++ Q 
Sbjct: 312 PNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQM 371

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD ++ KG  PN  TYS L+ +  K + V   M+L  +I +KG   + V+YN L+ G C+
Sbjct: 372 LDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQ 431

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+   A   F+++ S+G  P+VV+Y ILL  LC  G  ++A E+  +M        I  
Sbjct: 432 SGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGI 491

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI+I  +    K D A  +   +     +P   +YN +I  LC +G +        +M 
Sbjct: 492 YNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMK 551

Query: 371 HRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC--RKG 426
              C P++ TYN L  A L G G V  +  +I+ +  +  ++     K V+  L   R  
Sbjct: 552 EDGCAPSDCTYNILIRAHLGGSG-VISSVELIEEMKMRGFAADASTIKMVVVMLSDGRLD 610

Query: 427 KTY 429
           KT+
Sbjct: 611 KTF 613



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 181/393 (46%), Gaps = 1/393 (0%)

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           V+Y   +R   +   +N+++   + +IQ   +P+   +S L  A  + +     +    +
Sbjct: 35  VSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKE 94

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +   G + N+ + N+++   C++ +   A          GFEPN ++++ L+   C+EGR
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             EA  L+  M      P +VT N LI  L   G+   AL ++D MVK     +  +Y P
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQ 407
           ++ R+C  G   L +    +M  R  K +   Y+  +  LC  G + +A ++   +  K 
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             +    Y  +I  LC  G+     ++L EM      P+  T+S+LI     EG + EA 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           E++  M      PD   +++L+ G CK  R   + ++  +M+ KG  PN  TY+IL+   
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
                ++    +  E+  + +V+++     ++Q
Sbjct: 395 CKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQ 427


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 221/446 (49%), Gaps = 4/446 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS---GIIPDASSYTYLVNC 142
           ++RM   G  PDVV    LL   C   + ++A++++ MM  S      P+  SY  ++N 
Sbjct: 153 IKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVING 212

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
              +G V  A  L  +M D G   N VTY +++ GLC    ++++     ++I KG+ P+
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+            +++L+++ A G KP+  +Y  LL  LC  GR  EA  FF 
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFD 332

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  KG +PNV  Y IL+     +G   E ++LL  M     SP    +NI+  + A   
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             D A+ + ++M +    P   ++  +I  LC  G+VD  V   +QM +    PN   +N
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC V K ++A      + N+       F+  ++ +LC KG+  +A +L+  M + 
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD  +Y++LI G C+ G I+EA +   VM     KPD   +N LL G C++ R D +
Sbjct: 513 GTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDA 572

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGI 527
             VF+ M+  G  P   TY+ ++ G+
Sbjct: 573 YGVFREMLRNGITPGVVTYSTILHGL 598



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 220/450 (48%), Gaps = 1/450 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+ KG KPD      L++      K K+ ++++E M + G+ PD  +Y  L+N LC 
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A    + M   G   N   Y  L+ G    G L++    L+ +++ GL P+   
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ +  A  K+  +  AM + + +  +G  P++V++  L+  LCK GR ++A+  F  + 
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM 440

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           ++G  PN+  +N L+  LC   +WE+A E   EM      P +V +N ++ +L   G+  
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A +++D M +   RP   SY  +I   C  G++D   K LD M     KP+E TYN L 
Sbjct: 501 KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G++ +A+ + + +     +     Y  ++  L    +  +A +L   M   G  
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            + + Y+ ++ GL     ++EA ++F  +   D++ ++  FN ++  L KS R + ++ +
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           F  +   G +P+  TY ++ E +  +  LE
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLE 710



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 208/479 (43%), Gaps = 48/479 (10%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS----------SG 128
           L+DA    + +++      ++   +LL  + + +  + +    E++VS            
Sbjct: 30  LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + PD  +Y+ L+ C C+ G + +       +   G+  N +  N L++GLC    L +++
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 189 QFL-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK---PNLVSYNVL 244
             L  R+ + G  P+  +Y+ LL+    E+    A++LL  +    G+   PN+VSY  +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + G   EG+ ++A   F ++  +G +PNVV+Y  ++  LC     + A  +  +M     
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P   TYN LI      GK    +++L+EM     +P   +Y  ++  LC+ G+      
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
             D M  +  KPN   Y  L                                  I     
Sbjct: 330 FFDSMIRKGIKPNVAIYGIL----------------------------------IHGYAT 355

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           KG   +   LL  M + G +PD + ++ +      + +I+EA+ IF  M++    PDV N
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           F AL+  LCK  R D ++  F  M+ +G  PN   +  LV G+   D+ E + E   E+
Sbjct: 416 FGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM 474



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 1/358 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA L+  +M+++G  P++    +L+Y LC  +K +KA +    M++ GI PD   + 
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC KG V  A +L++ ME  G   + ++Y +L+ G C++G ++++ + LD ++  
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+ +TY+ LL    +   +  A  +  +++  G  P +V+Y+ +L GL    R  EA
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              + ++ + G + N+  YNI+L  L      +EA +L   +   D    I T+NI+IG+
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A+ +   +      P   +Y  I   L  EG ++        M      PN
Sbjct: 668 LFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
               N L   L   G +  A A +  L  K  S        +I+ L R    + A  L
Sbjct: 728 SRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 152/377 (40%), Gaps = 50/377 (13%)

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL----------------------------- 248
           G+  A+KL D ++      +++++N LLT +                             
Sbjct: 29  GLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTI 88

Query: 249 ----------------CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
                           C+ GR E     F  +   G+  N +  N LL+ LC   R  EA
Sbjct: 89  KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148

Query: 293 NELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR---PSAASYNP 348
            ++L + M     +P +V+YN L+       + + AL++L  M   + R   P+  SY  
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQ 407
           +I    +EG+VD       +M  R  +PN  TY   +  LC    V  A  + Q + +K 
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                + Y  +I      GK  +  ++L EM+ +G  PD YTY SL+  LC  G   EA 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
             F  M     KP+V  +  L+ G           ++  +M+E G  P+   + I+    
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 528 AHQDELELSAEVLKELQ 544
           A +  ++ +  +  +++
Sbjct: 389 AKKAMIDEAMHIFNKMK 405



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 88/221 (39%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++DA+     M+  G  P VV  + +L+ L    +  +A ++   M++SG   +  
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  ++N L K   V  A +L + +    +     T+N ++  L   G    ++     +
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATI 684

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GLVP+ FTY  + E   +E  +     L   +   G  PN    N L+  L   G  
Sbjct: 685 SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI 744

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
             A  +   L  K F     +  +L+  L  +     A  L
Sbjct: 745 TRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 224/466 (48%), Gaps = 15/466 (3%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A     RM+     P  V    LL  + K       + +   M S GI P+  +   
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N  C    VG+A  ++ K+   G+  +T T+ +L+RG+C+ G + ++L   D++I +G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY  L+    K     AA++LL  ++ K  +PN+ +YN ++  LCK+ +  EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ +KG  P++ +YN L+ +LC    W+    LL EM      P +V++N ++ +L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A  V+D+M++    P+  +Y  ++   C   ++D  VK  D M  + C PN 
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            +YN L  + G  K+Q     I              Y  ++   C      +A ++   M
Sbjct: 342 ISYNTL--INGYCKIQRIDKAIH-------------YTXLMDXXCCYLNMDEAVKVFDTM 386

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  P+  +Y++LI G C    I++A+ +F  M   +  PD   ++ L+ GLC   R 
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 446

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             ++ +F  M+   Q+PN  TY IL++ +     L  +  +LK ++
Sbjct: 447 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 492



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 231/499 (46%), Gaps = 20/499 (4%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L +++  GH+PD    T L+  +C   K+ +A+ + + M+  G  PD  +Y  L+N
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK GN   A++L+  M       N   YN+++  LC    + ++      ++ KG+ P
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           + FTY+ L+ A            LL++++     P++VS+N ++  LCKEG+  EA    
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVV 294

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL--- 318
             +  +G EPNVV+Y  L+   C+    +EA ++   M      P +++YN LI      
Sbjct: 295 DKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354

Query: 319 -----AYHGKT-----------DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
                A H              D A+KV D MV     P+  SYN +I   C   ++D  
Sbjct: 355 QRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 414

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
           +    +M  +   P+  TY+ L   LC V ++Q+A A+   +           Y+ ++  
Sbjct: 415 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 474

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC+     +A  LL  +      PD    +  I G+C  G +E A ++F  +     +PD
Sbjct: 475 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 534

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           V  ++ ++ GLC+    D + ++F+ M E G   N   Y  +  G    +E   + ++L+
Sbjct: 535 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 594

Query: 542 ELQLRQVVSESAVERLVMQ 560
           E+  R   ++++   L ++
Sbjct: 595 EMVARGFSADASTMTLFVK 613



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 223/471 (47%), Gaps = 20/471 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    ++M+ +G +PDVV    L+  LCK      AI+++  MV     P+  +Y 
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 205

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A  L  +M   G   +  TYNSL+  LC L         L+ ++  
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++P+  +++ +++A  KE  V  A  ++D +I +G +PN+V+Y  L+ G C     +EA
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG------DRS------ 305
           ++ F  +  KG  PNV+SYN L+   C   R ++A      MD        D +      
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDT 385

Query: 306 -------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
                  P +++YN LI       + D A+ +  EM +    P   +Y+ +I  LC   +
Sbjct: 386 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 445

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +   +    +M      PN  TY  L   LC    + EA A+++++         +    
Sbjct: 446 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 505

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            I  +CR G+   A  L   ++  G  PD +TYS +I GLC  GL++EA ++F  M+E  
Sbjct: 506 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
              +   +N +  G  ++  T  ++++ Q M+ +G   + +T T+ V+ ++
Sbjct: 566 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 616



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 206/423 (48%), Gaps = 26/423 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF     MV+KG  PD+    +L++ LC   + K    ++  MV S I+
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  S+  +V+ LCK+G V  A  +V+KM   G   N VTY +L+ G C+L  ++++++ 
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYK----ERGVH---------------AAMKLLDDIIA 231
            D ++ KG +PN  +Y+ L+    K    ++ +H                A+K+ D ++ 
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVC 388

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KG  PN++SYN L+ G CK  R ++A+  F ++  +   P+ V+Y+ L+  LC   R ++
Sbjct: 389 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 448

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  L  EM    + P +VTY IL+  L  +     A+ +L  +      P     N  I 
Sbjct: 449 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 508

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQ 407
            +C  G+++        +  +  +P+  TY    NG   LC  G + EA  + + +    
Sbjct: 509 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING---LCRRGLLDEASKLFREMDENG 565

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            +     Y  +     R  +T +A QLL EM   GF+ D+ T +  ++ L  +GL +   
Sbjct: 566 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLK 625

Query: 468 EIF 470
           +I 
Sbjct: 626 QIL 628



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 150/317 (47%), Gaps = 23/317 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI------------------- 118
           ++++A    + MV KG  P+V+    L+   CK  ++ KAI                   
Sbjct: 321 EMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAV 380

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           KV + MV  G +P+  SY  L+N  CK   +  AM L  +M       +TVTY++L+ GL
Sbjct: 381 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 440

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C +  L  ++     ++    +PN  TY  LL+   K R +  AM LL  I      P++
Sbjct: 441 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 500

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
              N+ + G+C+ G  E A   F +L SKG +P+V +Y+I++  LC  G  +EA++L  E
Sbjct: 501 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 560

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           MD    +     YN +      + +T  A+++L EMV   F   A++    +  L  +G 
Sbjct: 561 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG- 619

Query: 359 VDLVVKCLDQMFHRRCK 375
              + + L Q+    CK
Sbjct: 620 ---LDQSLKQILRNGCK 633


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 215/394 (54%), Gaps = 5/394 (1%)

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSL--VRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           K  +  A+ L+ KM+D+    +  +YN++  V  LC  G  +QS+  L+ L++ GLVP+ 
Sbjct: 205 KNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQ 264

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ ++    +E  V  A +  + ++ K  KP+L + N+LL GLC EG  + A++ F  
Sbjct: 265 ITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNT 324

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA-YHG 322
             SKG   + V+YN ++  LC EGR+EEA +LLAEM+     P   TYN ++ +LA   G
Sbjct: 325 WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEG 384

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + + A +  ++MV+  F+P   + N ++  LC+EG +D  +K  +    +    +  TYN
Sbjct: 385 QVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYN 444

Query: 383 G-LAMLCGVGKVQEAFAIIQSLGNKQNSSP-QEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             ++ LC  G+ +EAF ++  +  K    P Q  Y  +I   CR+G+  +AFQ   +M +
Sbjct: 445 TIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVE 504

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
             F PD +T + L+RGLC EG++ +AL++F          D   +N ++ GLCK  R + 
Sbjct: 505 KSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEE 564

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           + ++   M EK   P+  TY  ++  +A    +E
Sbjct: 565 AFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 14/242 (5%)

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           V  +  IG+     +  HA ++ + M +   +P+  + N +I  L        V  CL +
Sbjct: 136 VILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSV--CLSK 193

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV--ITSLCRKG 426
                       +  +       K+ EA  +I  + +         Y  +  +  LCR G
Sbjct: 194 ----------AIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSG 243

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           KT Q+   L E+ + G  P   TY+++I G C EG +E+A +    M E  +KPD+   N
Sbjct: 244 KTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCN 303

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            LL GLC     D +L++F   I KG+  +  TY  ++ G+  +   E + ++L E++ +
Sbjct: 304 ILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEK 363

Query: 547 QV 548
           ++
Sbjct: 364 KL 365


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 242/468 (51%), Gaps = 15/468 (3%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +L DA   L+ + + G   D V    L+   C+  ++  A +++     SG   +  +Y
Sbjct: 126 RRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADAERLLAAAGLSGAA-NVVTY 183

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+N  C+ G +  A+ L+  M       +T TYN+++ GLC       +   +  +++
Sbjct: 184 TTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVR 240

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
               PN  T++  + A  +   +  A++LLD +   G  P++V Y+ L+ G  ++GR ++
Sbjct: 241 NHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDD 300

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           AI     +  K   PN + YN  L+ LC+  RWE+  +L+ EM   D  P   T+++L  
Sbjct: 301 AIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTS 357

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L  +G  D A++VL++M K   RP A  YN +I     +G+VD  +K L+ M    C P
Sbjct: 358 CLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSP 414

Query: 377 NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  ++N  L  LC   +  +A  +I  +  +     +  +  +I SLC+ G+   A ++ 
Sbjct: 415 DVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVF 474

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +M KYG TPD  TYSSLI GL  +GL+E A+E+F  M     KPD+  +NA+L GLC++
Sbjct: 475 EQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVLKGLCRA 531

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            R + + E+   M  K   PNE T+ IL+  +  +  ++ + EV +++
Sbjct: 532 ARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQM 579



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 231/445 (51%), Gaps = 13/445 (2%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +  DA   +  MV     P+ V     +   C+   + +A+++++ M   G  PD   Y
Sbjct: 226 RQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIY 285

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           + LVN   ++G V  A++L+  M       NT+ YN+ ++GLC+        Q +  +++
Sbjct: 286 STLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVR 342

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           K  +PN  T+S L     +   V  AM++L+ +   G +P+ V YN L+    ++GR ++
Sbjct: 343 KDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDD 402

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++    +P     P+V+S+N  L+ LC   RW++A EL+ +M   D     +T+NILI 
Sbjct: 403 ALKLLNSMPCS---PDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILID 459

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           SL  +G+ ++A++V ++M K    P   +Y+ +I  L  +G V+  ++    M    CKP
Sbjct: 460 SLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKP 516

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +   YN  L  LC   + ++A  +I ++  K     +  +  +I SLC+KG   +A ++ 
Sbjct: 517 DIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVF 576

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +M KYG TPD +TY++LI G   +G +++A  +   M     KPD  ++N+ L GLC++
Sbjct: 577 EQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMS---CKPDAVSYNSALKGLCRA 633

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTY 520
            R   + EV   M+     PNE T+
Sbjct: 634 ERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 235/503 (46%), Gaps = 48/503 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +L DA  +L          +VV  T L+   C++ ++  A+    ++ S  + PD  
Sbjct: 158 RDGRLADAE-RLLAAAGLSGAANVVTYTTLINGYCRSGRLADALA---LIASMPVAPDTY 213

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  LC       A  L+ +M     P N VT+ + +R  C  G L++++Q LDR+
Sbjct: 214 TYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRM 273

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q G  P+   YS L+    ++  V  A++LL+ ++ K   PN + YN  L GLC   R 
Sbjct: 274 PQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRW 330

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+  +   ++  K   PN  ++++L   LC  G  + A E+L +M      P  V YN L
Sbjct: 331 EDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTL 390

Query: 315 IGSLAYHGKTDHALKVLDEM------------VKGRFRPS-------------------- 342
           I S +  G+ D ALK+L+ M            +KG  R                      
Sbjct: 391 IYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLI 450

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             ++N +I  LC  G+V+  ++  +QM    C P+  TY+ L   L   G V+ A  + Q
Sbjct: 451 EMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQ 510

Query: 402 SLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           S+  K    P  F Y  V+  LCR  +   A +L+  M +    P+  T++ LI  LC +
Sbjct: 511 SMPCK----PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQK 566

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           GL++ A+E+F  M +Y   PD+  +NAL+ G  +  R D +  +   M  K   P+  +Y
Sbjct: 567 GLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSY 623

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
              ++G+   +  + + EV+ E+
Sbjct: 624 NSALKGLCRAERWKEAEEVVAEM 646



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 184/374 (49%), Gaps = 42/374 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA   L  M+ K   P+ +     L  LC A + +   +++  MV    +P+ ++++
Sbjct: 297 RVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFS 353

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV---------------------- 175
            L +CLC+ G V  AM+++E+M  YG   + V YN+L+                      
Sbjct: 354 MLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCS 413

Query: 176 ----------RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
                     +GLC     + + + + +++++       T++ L+++  +   V+ A+++
Sbjct: 414 PDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEV 473

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            + +   G  P++V+Y+ L+ GL ++G  E AI  F+ +P K   P++  YN +L+ LC 
Sbjct: 474 FEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNAVLKGLCR 530

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
             RWE+A EL++ M   D  P  +T+NILI SL   G  D A++V ++M K    P   +
Sbjct: 531 AARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFT 590

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLG 404
           YN +I     +G++D   + L  M    CKP+  +YN  L  LC   + +EA  ++  + 
Sbjct: 591 YNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEML 647

Query: 405 NKQNSSPQEFYKYV 418
             +    +  +KY 
Sbjct: 648 RMKCPPNEVTFKYA 661



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 156/372 (41%), Gaps = 72/372 (19%)

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEP------------------------- 271
           +V+ N+L+  LC + R  +A R    L + G  +P                         
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADAERLLAA 171

Query: 272 -------NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
                  NVV+Y  L+   C  GR  +A  L+A M     +P   TYN ++  L    + 
Sbjct: 172 AGLSGAANVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQW 228

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM--------------- 369
           + A  ++ EMV+    P+  ++   I   C  G +D  V+ LD+M               
Sbjct: 229 EDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTL 288

Query: 370 ---FHRR--------------CKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
              F  +              CKPN   YN  L  LC   + ++   +I  +  K     
Sbjct: 289 VNGFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPN 348

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           +  +  + + LC+ G    A ++L +M KYG  PD+  Y++LI     +G +++AL++  
Sbjct: 349 EATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLN 408

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M      PDV +FNA L GLC++ R D + E+   M+ +     E T+ IL++ +    
Sbjct: 409 SMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNG 465

Query: 532 ELELSAEVLKEL 543
            +  + EV +++
Sbjct: 466 RVNNAIEVFEQM 477



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 134/274 (48%), Gaps = 11/274 (4%)

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMD-GGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           VV+ NIL++ LC + R  +A  +L  +   G   P  V++N L+      G+   A ++L
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAADP--VSHNTLVAGYCRDGRLADAERLL 169

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
                     +  +Y  +I   C  G++   +  +  M      P+  TYN + M LCG 
Sbjct: 170 AAAGLSGAA-NVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGA 225

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
            + ++A A++  +        +  +   I + C+ G   +A QLL  M +YG TPD   Y
Sbjct: 226 RQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIY 285

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S+L+ G   +G +++A+E+   M     KP+   +NA L GLC ++R +   ++   M+ 
Sbjct: 286 STLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVR 342

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K  +PNE T+++L   +     ++ + EVL+++ 
Sbjct: 343 KDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMH 376



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 6/206 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++ ++N+A    E+M   G  PD+V  ++L+  L +   ++ AI++ + M      
Sbjct: 459 DSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK--- 515

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   Y  ++  LC+      A +L+  M     P N +T+N L+  LC  G ++++++ 
Sbjct: 516 PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEV 575

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            +++ + G  P+ FTY+ L+    ++  +  A +LL  +     KP+ VSYN  L GLC+
Sbjct: 576 FEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCR 632

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSY 276
             R +EA     ++      PN V++
Sbjct: 633 AERWKEAEEVVAEMLRMKCPPNEVTF 658


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 234/472 (49%), Gaps = 3/472 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +   A    + +VS G +PDV   T ++  LC+     +A +V+  M SSG     +
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVA 251

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y   +  LCK   V  A+++   +   G   +  TY +LV GLC +       + ++ +
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ G VP+    S L++   K+  + +A  L++ +   G  P+L  YN L+  +CK+G+ 
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F ++  KG  PN V+Y+IL+ S C  G+ + A   L +M       T+  Y+ L
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK   A  + DEM+    +P+   Y  +I+  C EG++    +   +M  +  
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            PN  T+  L + LC   ++ EA  +   +  + N  P E  Y  +I   C++G T +AF
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEM-VEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +LL EM + G  PD+YTY  LI GLC  G + EA E    ++    K +   F+ALL G 
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGY 610

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           CK  R D +L+  + M+ +G   +   Y++L+ GI  Q +     ++LK++ 
Sbjct: 611 CKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMH 662



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 236/497 (47%), Gaps = 44/497 (8%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           KG + DV     L+  LCK  + +   ++M  M+  G +P  ++ + LV+ L KKGN+G 
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A  LV K++ +G   +   YN+L+  +C  G L+++    + +  KGL PN  TYS L++
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398

Query: 212 AAYKERG------------------------------------VHAAMKLLDDIIAKGGK 235
           + + +RG                                    + AA  L D++IA G K
Sbjct: 399 S-FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           PN+V Y  L++G CKEG    A R + ++  KG  PN  ++  L+  LC   R  EAN+L
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             EM   +  P  VTYN+LI      G T  A ++LDEMV+    P   +Y P+I+ LCS
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G+V    + ++ +   + K NE  ++ L    C  G++ +A    + +  +  +     
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVC 637

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I  + R+        LL +M   G  PD+  Y+++I      G ++ A  ++ +M 
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV 697

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
                P+V  + AL+ GLCK    D +  + + M+    +PN+ TY   ++ +  +  +E
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 757

Query: 535 LSAEVLKELQLRQVVSE 551
                 K +QL  V+ E
Sbjct: 758 ------KAIQLHDVLLE 768



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 237/481 (49%), Gaps = 6/481 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  KL+ A   L +M   G K  V   ++L+   CK  K++ A  + + M+++G+ 
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   YT L++  CK+G +  A +L  +M   G   NT T+ +L+ GLC    + ++ + 
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +++  ++PN  TY+ L+E   KE     A +LLD+++ KG  P+  +Y  L++GLC 
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA  F  DL  +  + N + ++ LL   C EGR ++A +   EM G   +  +V 
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVC 637

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y++LI  +         + +L +M     RP    Y  +I      G + +     D M 
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV 697

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C PN  TY  L   LC +G + +A  + + +    +   Q  Y   +  L  +G   
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 757

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A Q L+++   GF  ++ TY+ LIRG C  G I+EA E+ V M +    PD  +++ ++
Sbjct: 758 KAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816

Query: 490 LGLCKSRRTDL--SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
              C  RR DL  ++++++ M+ +G  P+   Y  L+ G     EL  + E+  ++  R 
Sbjct: 817 YEYC--RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874

Query: 548 V 548
           V
Sbjct: 875 V 875



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 224/464 (48%), Gaps = 6/464 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A    + M++ G KP+VV  T+L+   CK  ++  A ++   M   GI P+  ++T
Sbjct: 440 KLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFT 499

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC    +  A +L  +M ++    N VTYN L+ G C  GN  ++ + LD +++K
Sbjct: 500 ALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK 559

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLVP+ +TY  L+        V  A + ++D+  +  K N + ++ LL G CKEGR ++A
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   R++  +G   ++V Y++L+  +  +       +LL +M      P  V Y  +I +
Sbjct: 620 LDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDA 679

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            A  G    A  + D MV     P+  +Y  +I  LC  G +D       +M      PN
Sbjct: 680 NAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 739

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSL--GNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           + TY   L  L   G +++A  +   L  G   N+     Y  +I   C+ G+  +A ++
Sbjct: 740 QNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVT---YNILIRGFCKLGRIQEAAEV 796

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L  M   G +PD  +YS++I   C  G ++EA++++  M      PD   +N L+ G C 
Sbjct: 797 LVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCV 856

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           +     + E+   M+ +G  PN  TY  L+ G      +  +A+
Sbjct: 857 TGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 222/473 (46%), Gaps = 6/473 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   +  AF  + ++   G  P +     L+  +CK  K+ +A  +   M   G+ 
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++  CK+G +  A+  + KM + G       Y+SL+ G C LG L  +   
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I  GL PN   Y+ L+    KE  +H A +L  ++  KG  PN  ++  L++GLC 
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R  EA + F ++      PN V+YN+L+   C EG    A ELL EM      P   T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI  L   G+   A + ++++   + + +   ++ ++   C EG++D  +    +M 
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREML 627

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLG--NKQNSSPQE-FYKYVITSLCRKGK 427
            R    +   Y+   ++ G+ + Q+  +II  L   + Q   P    Y  +I +  + G 
Sbjct: 628 GRGVAMDLVCYS--VLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGN 685

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              AF L   M   G  P+  TY++LI GLC  GL+++A  +   M   +  P+ + +  
Sbjct: 686 LKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 745

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            L  L      + ++++  +++E G + N  TY IL+ G      ++ +AEVL
Sbjct: 746 FLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVL 797



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 143/280 (51%), Gaps = 1/280 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L+DA      M+ +G   D+V  + L+Y + +    +  I +++ M   G+ PD  
Sbjct: 612 KEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV 671

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT +++   K GN+  A  L + M   G   N VTY +L+ GLC +G ++++      +
Sbjct: 672 LYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 731

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +    +PN  TY+  L+    E  +  A++L  D++ +G   N V+YN+L+ G CK GR 
Sbjct: 732 LASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRI 790

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA     ++   G  P+ +SY+ ++   C  G  +EA +L   M     +P  V YN L
Sbjct: 791 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL 850

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           I      G+   A ++ D+M++   +P+ A+YN +I   C
Sbjct: 851 IYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 169/357 (47%), Gaps = 1/357 (0%)

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++  G++P   T S +L    + R    A+ L D+I++ G +P++  Y  ++  LC+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              A      + S G + +V +YN+ +R LC   R  EA E+   +        + TY  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L    + +   ++++EM++  F PS A+ + ++  L  +G +      ++++    
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P+   YN L   +C  GK+ EA ++  ++G+K        Y  +I S C++GK   A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             L +MT+ G     Y YSSLI G C  G +  A  +F  M     KP+V  + +L+ G 
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           CK      +  ++  M  KG  PN  T+T L+ G+ H + +  + ++  E+    V+
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 14/237 (5%)

Query: 52  ISPKDSVYT---KPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL 108
           + P + +YT     N K GN          L  AF   + MVS+G  P+VV  T L+  L
Sbjct: 666 LRPDNVLYTTMIDANAKAGN----------LKMAFGLWDIMVSEGCLPNVVTYTALINGL 715

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           CK   M KA  +   M++S  +P+ ++Y   ++ L  +GN+  A+QL + + + G+  NT
Sbjct: 716 CKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANT 774

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           VTYN L+RG C LG + ++ + L  +I  G+ P+  +YS ++    +   +  A+KL + 
Sbjct: 775 VTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWES 834

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           ++ +G  P+ V+YN L+ G C  G   +A     D+  +G +PN  +YN L+   C+
Sbjct: 835 MLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCL 891


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 226/470 (48%), Gaps = 1/470 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P ++Q   +L    K      A+ +   +   GI PD  +   L+NC C  G + +   +
Sbjct: 305 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + K+   GYP +TVT N+L++GLC+ G + ++L F D+L+ +G   N  +Y+ L+    K
Sbjct: 365 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                 A+KLL  I  +  KPN+  Y+ ++  LCK     EA   F ++  KG   +VV+
Sbjct: 425 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 484

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ L+   C+ G+ +EA  LL EM     +P + TY IL+ +L   GK   A  VL  M+
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           K   +P   +YN ++       +V       + M      P+  TY  L    C    V 
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  + + +  K        Y  ++  LC+ G+    + L+ EM   G   D  TY+SLI
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLI 664

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC  G +++A+ +F  M++   +P+   F  LL GLCK  R   + EVFQ ++ KG  
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 724

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
            +   Y +++ G   Q  LE +  +L +++    +  +    +++   F+
Sbjct: 725 LDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFK 774



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 232/500 (46%), Gaps = 3/500 (0%)

Query: 56  DSVYTKPNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKM 114
           D    KPN +  N   D   +   +++A+     M  KG   +VV  + L+Y  C   K+
Sbjct: 125 DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKL 184

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           K+A+ ++ +MV   I P+  +Y  LV+ LCK+G V  A  ++  M      +N +TY++L
Sbjct: 185 KEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTL 244

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           + G  ++  + ++    + +   G+ P+  +Y+ ++    K + V  A+ L  ++I    
Sbjct: 245 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF 304

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P ++ +N +L    K      A+     L  KG +P++ + NIL+   C  G+      
Sbjct: 305 PP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFS 363

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           +LA++      P+ VT N LI  L   G+   AL   D+++   F+ +  SY  +I  +C
Sbjct: 364 VLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 423

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
             G     +K L ++  R  KPN   Y+ +   LC    V EA+ +   +  K  S+   
Sbjct: 424 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 483

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I   C  GK  +A  LL EM      PD  TY+ L+  L  EG ++EA  +  VM
Sbjct: 484 TYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVM 543

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            +   KPDV  +N L+ G         +  VF  M   G  P+  TYTIL+ G      +
Sbjct: 544 LKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMV 603

Query: 534 ELSAEVLKELQLRQVVSESA 553
           + +  + KE+  + +V ++ 
Sbjct: 604 DEALNLFKEMHQKNMVPDTV 623



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 216/468 (46%), Gaps = 37/468 (7%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           ++ V+  ++  G  PD  +   L+  LC KG V  A+   +K+   G+  N V+Y +L+ 
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           G+C +G+   +++FL ++  +   PN   Y+ +++A  K + V  A  L  ++  KG   
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N+V+Y+ L+ G C  G+ +EA+     +  K   PNV +YNIL+ +LC EG+ +EA  +L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 297 AE----------------MDG-------------------GDRSPTIVTYNILIGSLAYH 321
           A                 MDG                      +P + +YNI+I      
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D AL +  EM+  RF P    +N I+            V    ++  +  +P+  T 
Sbjct: 287 KRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N L    C +G++   F+++  +  +           +I  LC KG+  +A     ++  
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 405

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            GF  +  +Y++LI G+C  G    A+++   ++    KP+V+ ++ ++  LCK +    
Sbjct: 406 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 465

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +  +F  M  KG   +  TY+ L+ G     +L+ +  +L E+ L+ +
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 141/265 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L  M+    KPDV     L+       ++KKA  V   M   G+ 
Sbjct: 525 DALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVT 584

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L+N  CK   V  A+ L ++M       +TVTY+SLV GLC  G ++     
Sbjct: 585 PDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDL 644

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +  +G   +  TY+ L++   K   +  A+ L + +  +G +PN  ++ +LL GLCK
Sbjct: 645 IDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCK 704

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR ++A   F+DL +KG+  +V  YN+++   C +G  EEA  +L++M+     P  VT
Sbjct: 705 GGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVT 764

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           ++I+I +L    + D A K+L +M+
Sbjct: 765 FDIIINALFKKDENDKAEKLLRQMI 789



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 1/328 (0%)

Query: 56  DSVYTKPNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKM 114
           D   TKPN +  +   D   +   +++A+     M  KG   DVV  + L+Y  C   K+
Sbjct: 439 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKL 498

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           K+AI ++  MV   I PD  +YT LV+ L K+G V  A  ++  M       +  TYN+L
Sbjct: 499 KEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTL 558

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           + G  ++  + ++    + +   G+ P+  TY+ L+    K + V  A+ L  ++  K  
Sbjct: 559 MNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNM 618

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P+ V+Y+ L+ GLCK GR         ++  +G   +V++YN L+  LC  G  ++A  
Sbjct: 619 VPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIA 678

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L  +M      P   T+ IL+  L   G+   A +V  +++   +      YN +I   C
Sbjct: 679 LFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHC 738

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
            +G ++  +  L +M    C PN  T++
Sbjct: 739 KQGLLEEALTMLSKMEENGCIPNAVTFD 766



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 98/191 (51%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A    + M  K   PD V  ++L+  LCK+ ++     +++ M   G   D  +Y  
Sbjct: 603 VDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNS 662

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ LCK G++  A+ L  KM+D G   NT T+  L+ GLC  G L  + +    L+ KG
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 722

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              + + Y+ ++    K+  +  A+ +L  +   G  PN V++++++  L K+   ++A 
Sbjct: 723 YHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAE 782

Query: 259 RFFRDLPSKGF 269
           +  R + ++G 
Sbjct: 783 KLLRQMIARGL 793



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 68/130 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L+ A     +M  +G +P+    T LL  LCK  ++K A +V + +++ G  
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 724

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D   Y  ++   CK+G +  A+ ++ KME+ G   N VT++ ++  L      +++ + 
Sbjct: 725 LDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKL 784

Query: 191 LDRLIQKGLV 200
           L ++I +GL+
Sbjct: 785 LRQMIARGLL 794


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 227/453 (50%), Gaps = 1/453 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++ ++AF     M  KG  P +    +LL    K N+ + A  +   M    I     ++
Sbjct: 165 NRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTF 224

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++N LCK+G +  A   V  ME  G   N VTYN++V G C  G +  +   L  + +
Sbjct: 225 NIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKR 284

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           + + P++FTY  L+    K+  +  A K+ ++++ KG +P+ V YN L+ G C +G  + 
Sbjct: 285 QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDM 344

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A  +  ++  KG  P + +YN L+ +L ME R +EA  ++ E+     SP  +TYNILI 
Sbjct: 345 ASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                     A  + DEM+    +P+  +Y  ++  L  + ++        ++      P
Sbjct: 405 GYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP 464

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +   +N L    C    V+ AF +++ +   +    +  +  ++   CR+GK  +A +L 
Sbjct: 465 DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM + G  PD  ++++LI G    G I++A  +   M +  + P V  +NAL+ GLCK+
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +  DL+ E+ + M+ KG  P++TTY  L+EGIA
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 200/392 (51%), Gaps = 1/392 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL  A   +  M + G KP++V    +++  C + +++ A  ++  M    I PD+ 
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ +CK+G +  A ++ E+M   G   + V YN+L+ G C  GNL+ +  + D +
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG+ P   TY+ L+ A + E+    A  ++ +I  KG  P+ ++YN+L+ G C+    
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANA 412

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A     ++ + G +P   +Y  LL  L  + R +EA++L  ++      P  + +N L
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNAL 472

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     +     A ++L +M + +  P   ++N I+   C EGKV+   +  D+M  R  
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI 532

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+  ++N L +     G +++AF +   + +   +     Y  ++  LC+  +   A +
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEE 592

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           LL EM   G TPD  TY +LI G+    + +E
Sbjct: 593 LLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 188/383 (49%), Gaps = 1/383 (0%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +++ ++ L++  C +   +++ +    + +KG++P   T + LL    K     AA  L 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            ++     K ++ ++N+++  LCKEG+ ++A  F   + + G +PN+V+YN ++   C  
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GR E A+ +L  M      P   TY  LI  +   G+ + A K+ +EMV+   RPSA  Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
           N +I   C++G +D+     D+M  +   P   TYN L   L    +  EA  +I+ +  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K  S     Y  +I   CR     +AF L  EM   G  P   TY+SL+  L  +  ++E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A ++F  +      PD   FNAL+ G C +     + E+ + M      P+E T+  +++
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 526 GIAHQDELELSAEVLKELQLRQV 548
           G   + ++E + E+  E++ R +
Sbjct: 510 GHCREGKVEEARELFDEMKRRGI 532



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 219/511 (42%), Gaps = 43/511 (8%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI---I 130
           H  HKL+DA      +V     P    A +LL             ++ E + +S      
Sbjct: 89  HFHHKLSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGF 148

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
             +  + YL+   C       A +    M++ G      T NSL+     L     +   
Sbjct: 149 KSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVL 208

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV------- 243
              + +  +  + +T++ ++    KE  +  A   +  +   G KPN+V+YN        
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268

Query: 244 ----------------------------LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                                       L++G+CK+GR EEA + F ++  KG  P+ V 
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN L+   C +G  + A+    EM     SPT+ TYN LI +L    +TD A  ++ E+ 
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
           +    P A +YN +I   C            D+M     KP + TY   L +L    +++
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  + + + ++        +  +I   C       AF+LL +M +    PD  T+++++
Sbjct: 449 EADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL--SLEVFQMMIEKG 512
           +G C EG +EEA E+F  M+    KPD  +FN L+ G   SRR D+  +  V   M++ G
Sbjct: 509 QGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY--SRRGDIKDAFRVRNEMLDTG 566

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             P   TY  LV+G+    E +L+ E+LKE+
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 148/321 (46%), Gaps = 2/321 (0%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G K ++V ++ L+   C   R +EA   F  +  KG  P + + N LL       R E A
Sbjct: 147 GFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             L AEM       ++ T+NI+I  L   GK   A   +  M     +P+  +YN I+  
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSP 411
            CS G+V+     L  M  ++ +P+  TY  L + +C  G+++EA  I + +  K     
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I   C KG    A     EM K G +P   TY+SLI  L ME   +EA  +  
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIK 385

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            ++E    PD   +N L+ G C+      +  +   M+  G  P + TYT L+  ++ ++
Sbjct: 386 EIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKN 445

Query: 532 ELELSAEVLKELQLRQVVSES 552
            ++ + ++ K++    V+ ++
Sbjct: 446 RMKEADDLFKKITSEGVLPDA 466



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 67/160 (41%)

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++E F  + +  ++        + Y+I S C   +  +AF+  Y M + G  P   T +S
Sbjct: 132 IREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNS 191

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+         E A  ++  M     K  V  FN ++  LCK  +   + +    M   G
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG 251

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             PN  TY  +V G      +E +  +L  ++ +++  +S
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 251/496 (50%), Gaps = 19/496 (3%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F ++ER    G  P+VV    L+   CK  ++ +A  +++ M S G+ P+  SY  ++N 
Sbjct: 33  FGEMER---NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIING 89

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LC++G++  A +++E+M   G+  + VTYN+L+ G C  GN +Q+L     +++ G+ P+
Sbjct: 90  LCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPS 149

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+ +  K R ++ AM+  D +  +G +PN  +Y  L+ G  ++G   EA R   
Sbjct: 150 VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILN 209

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++   GF P+VV+YN  +   C+  R EEA  ++ EM     +P +V+Y+ +I      G
Sbjct: 210 EMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 269

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + D A ++  EMV+    P A +Y+ +I  LC   ++        +M      P+E TY 
Sbjct: 270 ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYT 329

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L    C  G + +A  +   + +K        Y  +I  L ++ +T +A +LL+++   
Sbjct: 330 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE 389

Query: 442 GFTPDSYTYSS---------------LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              P   TY +               LI+G CM+GL+ EA  +F  M E ++KP    +N
Sbjct: 390 ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYN 449

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ G C+      +  +++ MI  G +P+  T   L++ +  +   E  +EV+ +    
Sbjct: 450 VIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRS 509

Query: 547 QVVSESAVERLVMQYD 562
             ++E+ + +++++ +
Sbjct: 510 CRLNEAELAKVLVEIN 525



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 200/412 (48%), Gaps = 16/412 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + +A+  LE M  KG  PD V    LL   CK     +A+ +   MV +G+ P   
Sbjct: 92  REGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 151

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+N +CK  N+  AM+  ++M   G   N  TY +L+ G    G LN++ + L+ +
Sbjct: 152 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 211

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G  P+  TY+  +        +  A+ ++ +++ KG  P++VSY+ +++G C++G  
Sbjct: 212 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 271

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A +  +++  KG  P+ V+Y+ L++ LC   R  EA +L  EM      P   TY  L
Sbjct: 272 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 331

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G  + AL + DEM+   F P A +Y+ +I  L  + +     + L ++ +   
Sbjct: 332 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 391

Query: 375 KPNEGTYNGL----------------AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
            P++ TY+ L                   C  G + EA  + +S+  + +   +  Y  +
Sbjct: 392 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 451

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           I   CR G   +AF L  EM   GF P + T  +LI+ L  EG+ EE  E+ 
Sbjct: 452 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 503



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 56/122 (45%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+   C    M +A +V E MV     P  + Y  +++  C+ GN+  A  L ++M   G
Sbjct: 416 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 475

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           +  +TVT  +L++ L   G   +  + +   ++   +  A     L+E  +KE  + A +
Sbjct: 476 FVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVL 535

Query: 224 KL 225
            +
Sbjct: 536 NV 537


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 226/466 (48%), Gaps = 18/466 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++ A   L +M + G  PD V    L+   C    ++ A +++ +M   G+I D  +Y 
Sbjct: 196 KVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 255

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK G    A  L + +E  G   N VT+NSL+ GLC  G  + + +FL++++  
Sbjct: 256 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 315

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+ +TYS  +E   K +G    +  + +++ K  KP+ V+Y +++  L KE      
Sbjct: 316 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 375

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R + ++ S G  P+VV+Y   +R+ C+EGR  EA  +L EM     +   + YN L+  
Sbjct: 376 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 435

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC------------ 365
            A  G+TDHA+ +L +M      P+  +Y  ++  L     V+ V+              
Sbjct: 436 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 495

Query: 366 -----LDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                 D M      PN GTY+  L      G+ +EA +++  +     S  ++ Y  ++
Sbjct: 496 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 555

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
           T  C+  +   A+ L+  M ++GF P   +Y  L+ GL  EG  ++A EIF+     DY 
Sbjct: 556 TCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 615

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           PD   +  ++ GL K   +D+S E+  M+      P+  TY +L E
Sbjct: 616 PDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 661



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 235/480 (48%), Gaps = 10/480 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R ++++ A    ++M  +G   DVV    L+  LC+A ++ +A+++   M      PD  
Sbjct: 22  RTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMH 77

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  LV  LC        + ++ +M++ G+  +T  Y ++V   C      ++ + L  +
Sbjct: 78  MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEM 137

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KGL P   T + ++ A  KE  +  A+++L+ +  +G KPN+ +YN L+ G C EG+ 
Sbjct: 138 FEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKV 197

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+     + + G  P+ V+YN+L+R  C++G  E A  LL  M+G        TYN L
Sbjct: 198 HKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNAL 257

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   G+TD A  + D +     +P+A ++N +I  LC  GK D+  K L++M    C
Sbjct: 258 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGC 317

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY+  +  LC +   QE  + I  +  K        Y  VI  L ++       +
Sbjct: 318 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 377

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
              EM   G  PD  TY++ +R  C+EG + EA  + + M +     D   +N L+ G  
Sbjct: 378 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 437

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH----QDELELS-AEVLKELQLRQV 548
              +TD ++ + + M     +PN+ TY IL+  +      +D L L+ A V K ++L  V
Sbjct: 438 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDV 497



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 233/508 (45%), Gaps = 20/508 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D R R+ K  +A   L+ M  KG  P VV  T ++   CK  +M  A++V+E+M   G  
Sbjct: 119 DFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 178

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  LV   C +G V  AM L+ KM   G   + VTYN L+RG C+ G++  + + 
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 238

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   GL+ + +TY+ L+ A  K+     A  L D +  +G KPN V++N L+ GLCK
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A +F   + S G  P+  +Y+  +  LC     +E    + EM   D  P+ V 
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 358

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y I+I  L          +   EMV     P   +Y   +   C EG+++     L +M 
Sbjct: 359 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 418

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI---------- 419
                 +   YN L      +G+   A +I++ +     S P +F  +++          
Sbjct: 419 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM-TSVASVPNQFTYFILLRHLVRMRLV 477

Query: 420 --------TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
                     + +  +    F L   M K  F P+S TYSS++ G   +G  EEA  +  
Sbjct: 478 EDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVS 537

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           +M+E     + D + AL+   CKS+R   +  +   MI+ G +P   +Y  L+ G+  + 
Sbjct: 538 LMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEG 597

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVM 559
           + + + E+    + +    +  V ++++
Sbjct: 598 QTDKAKEIFMNSRWKDYSPDEIVWKVII 625



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 224/462 (48%), Gaps = 18/462 (3%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +  L L RM   G +P       ++   C+  K K+A ++++ M   G+ P   + T ++
Sbjct: 94  EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 153

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N  CK+G +  A++++E M+  G   N  TYN+LV+G C  G +++++  L+++   G+ 
Sbjct: 154 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 213

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+A TY+ L+     +  + +A +LL  +   G   +  +YN L+  LCK+GRT++A   
Sbjct: 214 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 273

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  L ++G +PN V++N L+  LC  G+ + A + L +M     +P   TY+  I  L  
Sbjct: 274 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 333

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
              +   L  + EM++   +PS  +Y  +I +L  E    LV +   +M    C P+  T
Sbjct: 334 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 393

Query: 381 Y-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y   +   C  G++ EA  ++  +     +     Y  ++      G+T  A  +L +MT
Sbjct: 394 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 453

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALE-----------------IFVVMEEYDYKPDV 482
                P+ +TY  L+R L    L+E+ L                  +F VM++ ++ P+ 
Sbjct: 454 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 513

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
             ++++L G  +  RT+ +  +  +M E     NE  YT LV
Sbjct: 514 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 555



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 158/350 (45%), Gaps = 36/350 (10%)

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           ++  G +P+  ++N L+ G C+  + + A   F  +P +GF  +VVSY  L+  LC  GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 289 WEEANELLAEMDGGD-------------------------------RSPTIVTYNILIGS 317
            +EA EL  EMD  D                                 P+   Y  ++  
Sbjct: 61  IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                K   A ++L EM +    P   +   +I   C EG++   ++ L+ M  R CKPN
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L    C  GKV +A  ++  +     +     Y  +I   C  G    AF+LL 
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G   D YTY++LI  LC +G  ++A  +F  +E    KP+   FN+L+ GLCKS 
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGI----AHQDELELSAEVLKE 542
           + D++ +  + M+  G  P+  TY+  +E +      Q+ L    E+L++
Sbjct: 301 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 350



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 5/212 (2%)

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
           MV+  +RP A ++N +I   C   +VD+     D+M  R    +  +Y  L   LC  G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + EA  +      + +      Y  ++  LC   +  +   +L  M + G+ P +  Y++
Sbjct: 61  IDEAVELF----GEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           ++   C E   +EA E+   M E    P V    A++   CK  R   +L V ++M  +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             PN  TY  LV+G  ++ ++  +  +L +++
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 208


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 242/509 (47%), Gaps = 40/509 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++MV KG KP+ V    ++  LCKA ++  A  V + MV  G+ P   +Y  +++ LCK
Sbjct: 248 FQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK 307

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A  + ++M D G   + VTYN+++ GLC    ++++     ++I KG+ P+  T
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLT 367

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++   K + V  A  +   +I KG KPN  +YN L+ G    G+ EE ++  +++ 
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI------GSL- 318
           +   EP+V +Y +LL  LC  G+  EA  L   M      P++  Y I++      G+L 
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALS 487

Query: 319 ----------------------------AYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
                                       A     D  + +  +M +    P+  +Y  +I
Sbjct: 488 EMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
             LC  G+VD  V   +QM +    PN   +N L   LC V K ++   +   + N+   
Sbjct: 548 DALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIR 607

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
               F+  V+ +LC++G+  +A +L+  M   G  PD  +Y++LI G C    ++EA+++
Sbjct: 608 PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL 667

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              M     KP++ ++N LL G CK+ R D +  +F+ M+ KG  P   TY  ++ G+  
Sbjct: 668 LDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFR 727

Query: 530 QDEL----ELSAEVLKELQLRQVVSESAV 554
                   EL   ++K  +L  + + S +
Sbjct: 728 SGRFSEARELYVNMIKSRKLWSICTYSII 756



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 225/452 (49%), Gaps = 7/452 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  PDVV    ++  LCKA ++ +A  V + MV  G+ P+  +Y  +++ LCK   V  A
Sbjct: 220 GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMA 279

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             + +KM D G   + VTYN+++ GLC    ++++     ++I +G+ P+  TY+ +++ 
Sbjct: 280 EGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDG 339

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K + +  A  +   +I KG KP+ ++Y +++ GLCK    + A   F+ +  KG +PN
Sbjct: 340 LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             +YN L+      G+WEE  + + EM   D  P + TY +L+  L  +GK + A  + D
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFD 459

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
            M++   +PS   Y  ++     +G +  +   L+ M      PN   +N   ++C   K
Sbjct: 460 SMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFN--TVICAYAK 517

Query: 393 ---VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
              + E   I   +  +Q  SP    Y  +I +LC+ G+   A     +M   G TP++ 
Sbjct: 518 RAMIDEVMHIFIKM-KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNV 576

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
            ++SL+ GLC     E+  E+F+ M     +PD+  FN +L  LCK  R   +  +   M
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +  G  P+  +Y  L++G      ++ + ++L
Sbjct: 637 VCMGLKPDVISYNTLIDGHCFASRMDEAVKLL 668



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 228/511 (44%), Gaps = 36/511 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+ +G KPD V    ++  LCKA  + KA  V + M+  G+ PD  +YT +++ LCK
Sbjct: 318 FQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCK 377

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG---------------------------- 177
             +V  A  + ++M D G   N  TYN L+ G                            
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437

Query: 178 -------LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
                  LC  G  N++    D +I+KG+ P+   Y  +L    K+  +     LL+ ++
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           A G  PN   +N ++    K    +E +  F  +  +G  PNVV+Y  L+ +LC  GR +
Sbjct: 498 ANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVD 557

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +A     +M     +P  V +N L+  L    K +   ++  EM+    RP    +N ++
Sbjct: 558 DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVL 617

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
             LC EG+V    + +D M     KP+  +YN L    C   ++ EA  ++  + +    
Sbjct: 618 CNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLK 677

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  ++   C+ G+   A+ L  EM + G TP   TY++++ GL   G   EA E+
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           +V M +      +  ++ +L G CK+   D + ++FQ +       +  T+ I+++G+  
Sbjct: 738 YVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797

Query: 530 QDELELSAEVLKELQLRQVVSESAVERLVMQ 560
               E + ++   +    +V      RL+ +
Sbjct: 798 GGRKEDAMDLFAAIPANGLVPSVVTYRLIAE 828



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 215/474 (45%), Gaps = 16/474 (3%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-------MEMM 124
            R  +  L+DA    + ++    +P  V+A N L  +    K   + K+       M   
Sbjct: 17  ARSGNLGLHDALKLFDELLLHA-RPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRD 75

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
            S+ + PD  +Y+ ++ C C+ G +         +   G+  + +  N L++GLC    +
Sbjct: 76  CSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRV 135

Query: 185 NQSLQFLDR-LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII---AKGGKPNLVS 240
            +++  L R + + G      +Y+ LL+     R    A +LL  ++        P++VS
Sbjct: 136 GEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVS 195

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YN+++ G   EG+ ++A   F ++   G  P+VV+YN ++  LC     + A ++  +M 
Sbjct: 196 YNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMV 252

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P  VTYN +I  L    + D A  V  +MV    +PS  +YN II  LC    VD
Sbjct: 253 EKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVD 312

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                  QM  R  KP+  TYN +   LC    + +A  + Q + +K        Y  +I
Sbjct: 313 RAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIII 372

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC+     +A  +  +M   G  P++ TY+ LI G    G  EE ++    M  +D +
Sbjct: 373 DGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLE 432

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           PDV  +  LL  LCK+ + + +  +F  MI KG  P+ T Y I++ G   +  L
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 205/450 (45%), Gaps = 34/450 (7%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           +++ M +   +PDV     LL  LCK  K  +A  + + M+  GI P  + Y  +++   
Sbjct: 422 RIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYG 481

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           KKG +     L+  M   G   N   +N+++        +++ +    ++ Q+GL PN  
Sbjct: 482 KKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY  L++A  K   V  A+   + +I +G  PN V +N L+ GLC   + E+    F ++
Sbjct: 542 TYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            ++G  P++V +N +L +LC EGR  EA  L+  M      P +++YN LI    +  + 
Sbjct: 602 LNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRM 661

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           D A+K+LD MV    +P+  SYN ++   C  G++D       +M  +   P   TYN  
Sbjct: 662 DEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYN-- 719

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                                            ++  L R G+  +A +L   M K    
Sbjct: 720 --------------------------------TILNGLFRSGRFSEARELYVNMIKSRKL 747

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
               TYS ++ G C     +EA +IF  +   D + D+  FN ++ GL K  R + ++++
Sbjct: 748 WSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDL 807

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           F  +   G +P+  TY ++ E +  +  LE
Sbjct: 808 FAAIPANGLVPSVVTYRLIAENLIEEGSLE 837



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 200/431 (46%), Gaps = 18/431 (4%)

Query: 145 KKGNVGY--AMQLVEKMEDYGYPTNTVTYNSLV----RGLCMLGNLNQSLQFLDRLIQ-- 196
           + GN+G   A++L +++  +  P +    N L+    R  C   +   ++   +R+++  
Sbjct: 18  RSGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSS-KLAVSRFNRMLRDC 76

Query: 197 -KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              + P+  TYS ++    +   +         I+  G + + +  N LL GLC   R  
Sbjct: 77  SNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVG 136

Query: 256 EAIR-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRS--PTIVTY 311
           EA+    R +P  G    VVSYN LL+ LC   R EEA ELL  M DG D S  P +V+Y
Sbjct: 137 EAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSY 196

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NI+I      G+ D A  +  EM      P   +YN II  LC   +VD       QM  
Sbjct: 197 NIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVE 253

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +  KPN  TYN +   LC   +V  A  + Q + +K        Y  +I  LC+     +
Sbjct: 254 KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDR 313

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  +  +M   G  PD  TY+++I GLC    I++A  +F  M +   KPD   +  ++ 
Sbjct: 314 AEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIID 373

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           GLCK++  D +  VFQ MI+KG  PN  TY  L+ G     + E   + +KE+    +  
Sbjct: 374 GLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEP 433

Query: 551 ESAVERLVMQY 561
           +     L++ Y
Sbjct: 434 DVFTYGLLLDY 444



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 204/447 (45%), Gaps = 17/447 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K N+A    + M+ KG KP V     +L+   K   + +   ++ +MV++GI P+  
Sbjct: 447 KNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHR 506

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  ++    K+  +   M +  KM+  G   N VTY +L+  LC LG ++ ++   +++
Sbjct: 507 IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +G+ PN   ++ L+             +L  +++ +G +P++V +N +L  LCKEGR 
Sbjct: 567 INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA R    +   G +P+V+SYN L+   C   R +EA +LL  M      P IV+YN L
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTL 686

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G+ D+A  +  EM++    P   +YN I+  L   G+     +    M   R 
Sbjct: 687 LHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRK 746

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TY+  L   C      EAF I QSL +         +  +I  L + G+   A  
Sbjct: 747 LWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMD 806

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   +   G  P   TY  +   L  EG +EE   +F VME+    P+    NAL+    
Sbjct: 807 LFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALI---- 862

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTY 520
                       + ++++G++P    Y
Sbjct: 863 ------------RKLLDRGEIPRAGAY 877



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 1/333 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA LQ  +M+++G  P+ V   +L+Y LC  +K +K  ++   M++ GI PD   + 
Sbjct: 555 RVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFN 614

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK+G V  A +L++ M   G   + ++YN+L+ G C    ++++++ LD ++  
Sbjct: 615 TVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSA 674

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN  +Y+ LL    K   +  A  L  +++ KG  P + +YN +L GL + GR  EA
Sbjct: 675 GLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEA 734

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              + ++       ++ +Y+I+L   C    ++EA ++   +   D    I+T+NI+I  
Sbjct: 735 RELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDG 794

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A+ +   +      PS  +Y  I   L  EG ++ +      M      PN
Sbjct: 795 LFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPN 854

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
               N L   L   G++  A A +  L  K  S
Sbjct: 855 SHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFS 887



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 147/282 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ +A   ++ MV  G KPDV+    L+   C A++M +A+K+++ MVS+G+ P+  
Sbjct: 622 KEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV 681

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++  CK G +  A  L  +M   G      TYN+++ GL   G  +++ +    +
Sbjct: 682 SYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNM 741

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+   + +  TYS +L+   K      A K+   + +   + +++++N+++ GL K GR 
Sbjct: 742 IKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRK 801

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+  F  +P+ G  P+VV+Y ++  +L  EG  EE + L + M+    +P     N L
Sbjct: 802 EDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNAL 861

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           I  L   G+   A   L ++ +  F   A++ + +I+    E
Sbjct: 862 IRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 224/451 (49%), Gaps = 1/451 (0%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DAF   + M  KG  P V    ++L    K+N+ +KA  +   M    I     ++  +
Sbjct: 138 DDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIM 197

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N LCK+G +  A + +  ME  G   N VTYN+++ G C  G +  +    D +  +G+
Sbjct: 198 INVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGV 257

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+++TY   +    KE  +  A  +L+ +   G +P  V+YN L+ G C +G  E A  
Sbjct: 258 KPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFD 317

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
           +   +  +G  P V +YN+L+ +L ++ + +EA+ ++ EM      P  VTYNILI    
Sbjct: 318 YRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYC 377

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G    A  + DEM+    +P+  +Y  +I  L   G++       +++  +   P+  
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            +N L    C  G +  AFA+++ +   +    +  +  ++   CR+GK   A +L+ EM
Sbjct: 438 MFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEM 497

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  PD  +Y++LI G    G +++A  +   M    + P +  +NAL+ GLCK+   
Sbjct: 498 KSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEG 557

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           D + ++ + MI KG  PN+ TY  L+EGI +
Sbjct: 558 DHAEQLLKEMISKGITPNDNTYLSLIEGIGN 588



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 206/384 (53%), Gaps = 1/384 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL  A   +  M + G KP+VV    +++  C   +++ A  + ++M   G+ PD+ 
Sbjct: 203 KEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSY 262

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y   ++ +CK+G +  A  ++EKM++ G     VTYN+L+ G C  GNL  +  + D++
Sbjct: 263 TYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKM 322

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++GL+P   TY+ L+ A + +  +  A  ++ ++  KG  P+ V+YN+L+ G C+ G  
Sbjct: 323 VREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNV 382

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A     ++ SKG +P  V+Y  L+  L   GR ++A++L  ++      P ++ +N L
Sbjct: 383 KKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNAL 442

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     +G  D A  +L EM + +  P   ++N ++   C EGKV+   + +++M  R  
Sbjct: 443 IDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGI 502

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+  +YN L +     G +++AF +   + +   +     Y  +I  LC+  +   A Q
Sbjct: 503 KPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQ 562

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGL 457
           LL EM   G TP+  TY SLI G+
Sbjct: 563 LLKEMISKGITPNDNTYLSLIEGI 586



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 188/384 (48%), Gaps = 7/384 (1%)

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           V Y+ L+R  C L   + + +  D +  KG++P+    + +L    K      A  L  +
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +     K ++V++N+++  LCKEG+ ++A  F   + + G +PNVV+YN ++   C  GR
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            E A  +   M      P   TY   I  +   GK + A  +L++M +   RP+A +YN 
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLG 404
           +I   C++G +++     D+M      P   TYN     L + C   K+ EA  II+ + 
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDC---KMDEADGIIKEMS 358

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K        Y  +I   CR G   +AF L  EM   G  P   TY+SLI  L   G ++
Sbjct: 359 EKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMK 418

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A ++F  +      PD+  FNAL+ G C +   D +  + + M +   +P+E T+  L+
Sbjct: 419 QADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLM 478

Query: 525 EGIAHQDELELSAEVLKELQLRQV 548
           +G   + ++E + E+++E++ R +
Sbjct: 479 QGRCREGKVEAARELIEEMKSRGI 502



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 4/330 (1%)

Query: 218 GVHAAMKLLDDI-IAKG--GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           GV++  ++ +++ +A+G  G    V Y++L+   C+  R ++A   F  +  KG  P+V 
Sbjct: 98  GVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVH 157

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           + N +L       R E+A  L AEM       ++VT+NI+I  L   GK   A + +  M
Sbjct: 158 ACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLM 217

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKV 393
                +P+  +YN II   CS G+V+      D M  R  KP+  TY   ++ +C  GK+
Sbjct: 218 EALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKL 277

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +EA  +++ +           Y  +I   C KG    AF    +M + G  P   TY+ L
Sbjct: 278 EEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNML 337

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I  L ++  ++EA  I   M E    PD   +N L+ G C+      +  +   MI KG 
Sbjct: 338 IHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGI 397

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            P   TYT L+  ++ +  ++ + ++ +++
Sbjct: 398 QPTRVTYTSLIYVLSKRGRMKQADDLFEKI 427



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 34/287 (11%)

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V Y++L+R+ C   R ++A E    M G    P +   N ++       +T+ A  +  E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
           M + R + S  ++N +I  LC EGK+                                K 
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLK-------------------------------KA 210

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +E   ++++LG K N      Y  +I   C +G+   A  +   M   G  PDSYTY S 
Sbjct: 211 KEFIGLMEALGIKPNVVT---YNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSF 267

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G+C EG +EEA  +   M+E   +P    +N L+ G C     +++ +    M+ +G 
Sbjct: 268 ISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           MP  +TY +L+  +    +++ +  ++KE+  + +V +S    +++ 
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILIN 374



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 54/106 (50%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R R+ K+  A   +E M S+G KPD +    L+    K   MK A +V + M+S G  P 
Sbjct: 481 RCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPT 540

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
             +Y  L+  LCK     +A QL+++M   G   N  TY SL+ G+
Sbjct: 541 LLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 226/466 (48%), Gaps = 18/466 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++ A   L +M   G  PD V    L+   C    ++ A +++ +M   G+I D  +Y 
Sbjct: 232 KVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYN 291

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK G    A  L + +E  G   N VT+NSL+ GLC  G ++ + +FL++++  
Sbjct: 292 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSA 351

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+ +TYS  +E   K +G    +  + +++ K  KP+ V+Y +++  L KE      
Sbjct: 352 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 411

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R + ++ S G  P+VV+Y   +R+ C+EGR  EA  +L EM     +   + YN L+  
Sbjct: 412 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 471

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC------------ 365
            A  G+TDHA+ +L +M      P+  +Y  ++  L     V+ V+              
Sbjct: 472 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 531

Query: 366 -----LDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                 D M      PN GTY+  L      G+ +EA +++  +     S  ++ Y  ++
Sbjct: 532 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 591

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
           T  C+  +   A+ L+  M ++GF P   +Y  L+ GL  EG  ++A EIF+     DY 
Sbjct: 592 TCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 651

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           PD   +  ++ GL K   +D+S E+  M+      P+  TY +L E
Sbjct: 652 PDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 697



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 235/480 (48%), Gaps = 10/480 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R ++++ A    ++M  +G   DVV    L+   C+  ++ +A+++   M      PD  
Sbjct: 58  RTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMH 113

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  LV  LCK G     + ++ +M++ G+  +T  Y ++V   C      ++ + L  +
Sbjct: 114 MYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEM 173

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KGL P   T + ++ A  KE  +  A+++L+ +  +G KPN+ +YN L+ G C EG+ 
Sbjct: 174 FEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKV 233

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+     +   G  P+ V+YN+L+R  C++G  E A  LL  M+G        TYN L
Sbjct: 234 HKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNAL 293

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   G+TD A  + D +     +P+A ++N +I  LC  GKVD+  K L++M    C
Sbjct: 294 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGC 353

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY+  +  LC +   QE  + I  +  K        Y  VI  L ++       +
Sbjct: 354 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 413

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
              EM   G  PD  TY++ +R  C+EG + EA  + + M +     D   +N L+ G  
Sbjct: 414 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 473

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH----QDELELS-AEVLKELQLRQV 548
              +TD ++ + + M     +PN+ TY IL+  +      +D L L+ A V K ++L  V
Sbjct: 474 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDV 533



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 233/508 (45%), Gaps = 20/508 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D R  + K  +A   L+ M  KG  P VV  T ++   CK  +M  A++V+E+M   G  
Sbjct: 155 DFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 214

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  LV   C +G V  AM L+ KM   G   + VTYN L+RG C+ G++  + + 
Sbjct: 215 PNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRL 274

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   GL+ + +TY+ L+ A  K+     A  L D +  +G KPN V++N L+ GLCK
Sbjct: 275 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 334

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A +F   + S G  P+  +Y+  +  LC     +E    + EM   D  P+ V 
Sbjct: 335 SGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 394

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y I+I  L          +   EMV     P   +Y   +   C EG+++     L +M 
Sbjct: 395 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 454

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI---------- 419
                 +   YN L      +G+   A +I++ +     S P +F  +++          
Sbjct: 455 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM-TSVASVPNQFTYFILLRHLVRMRLV 513

Query: 420 --------TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
                     + +  +    F L   M K  F P+S TYSS++ G   +G  EEA  +  
Sbjct: 514 EDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVS 573

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           +M+E     + D + AL+   CKS+R   +  +   MI+ G +P+  +Y  L+ G+  + 
Sbjct: 574 LMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEG 633

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVM 559
           + + + E+    + +    +  V ++++
Sbjct: 634 QTDKAKEIFMNSRWKDYSPDEIVWKVII 661



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 223/462 (48%), Gaps = 18/462 (3%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +  L L RM   G +P       ++   C   K K+A ++++ M   G+ P   + T ++
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N  CK+G +  A++++E M+  G   N  TYN+LV+G C  G +++++  L+++   G+ 
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+A TY+ L+     +  + +A +LL  +   G   +  +YN L+  LCK+GRT++A   
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  L ++G +PN V++N L+  LC  G+ + A + L +M     +P   TY+  I  L  
Sbjct: 310 FDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 369

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
              +   L  + EM++   +PS  +Y  +I +L  E    LV +   +M    C P+  T
Sbjct: 370 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 429

Query: 381 Y-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y   +   C  G++ EA  ++  +     +     Y  ++      G+T  A  +L +MT
Sbjct: 430 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 489

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALE-----------------IFVVMEEYDYKPDV 482
                P+ +TY  L+R L    L+E+ L                  +F VM++ ++ P+ 
Sbjct: 490 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 549

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
             ++++L G  +  RT+ +  +  +M E     NE  YT LV
Sbjct: 550 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 591



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 190/378 (50%), Gaps = 9/378 (2%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TYN+++R LC   +L  +L++L  +++ G  P+A+T++ L+    +   V  A  L D +
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
             +G   ++VSY  L+ G C+ GR +EA+  F ++     +P++  Y  L++ LC  GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           EE   +L  M      P+   Y  ++    +  K   A ++L EM +    P   +   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I   C EG++   ++ L+ M  R CKPN  TYN L    C  GKV +A A++  +     
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +     Y  +I   C  G    AF+LL  M   G   D YTY++LI  LC +G  ++A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI- 527
           +F  +E    KP+   FN+L+ GLCKS + D++ +  + M+  G  P+  TY+  +E + 
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 528 ---AHQDELELSAEVLKE 542
                Q+ L    E+L++
Sbjct: 369 KMKGSQEGLSFIGEMLQK 386



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 202/410 (49%), Gaps = 5/410 (1%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  LC++ ++  A++ +  M   G+  +  T+NSL+ G C    ++ +    D++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G   +  +Y+ L+E   +   +  A++L  ++     +P++  Y  L+ GLCK GR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRG 128

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EE +   R +   G+ P+  +Y  ++   C E + +EA E+L EM     +P +VT   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G+   AL+VL+ M     +P+  +YN ++   C+EGKV   +  L++M     
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN L    C  G ++ AF +++ +      + Q  Y  +I +LC+ G+T QA  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   +   G  P++ T++SLI GLC  G ++ A +    M      PD   +++ +  LC
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K + +   L     M++K   P+   YTI++  +  +    L A    E+
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 5/252 (1%)

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TYN +I SL        AL+ L  MV+  +RP A ++N +I   C   +VD+     D+M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             R    +  +Y  L    C  G++ EA  +      + +      Y  ++  LC+ G+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELF----GEMDQPDMHMYAALVKGLCKAGRG 128

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +   +L  M + G+ P +  Y++++   C E   +EA E+   M E    P V    A+
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +   CK  R   +L V ++M  +G  PN  TY  LV+G  ++ ++  +  +L ++++  V
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 549 VSESAVERLVMQ 560
             ++    L+++
Sbjct: 249 NPDAVTYNLLIR 260


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 217/410 (52%), Gaps = 7/410 (1%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +++  ++  LC  G    A++L+ +M       N VTYN+++ G C  G +  +L  +  
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 170

Query: 194 LIQKG-LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKE 251
           + ++G + PN +TY  ++    K   V  A+K+ D+++ KG  KP  V YN L+ G C +
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ + A+ +   +  +G    V +YN+L+ +L M+GR  EA EL+ EM G   +P + TY
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI      G    AL++ + M +   R +  +Y  +I  L  +G+V    K  D+   
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350

Query: 372 RRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R  +P+   YN L       G +  AF I+  +  K+ +     Y  ++  LC  G+  +
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L+ EMT+ G  PD  TY++LI G  M+G +++AL I   M    + P +  +NAL+ 
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           GLCK+ + D +  + + M+E G  P+++TY  L+EG+  +DE  +  E L
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERL 520



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 196/392 (50%), Gaps = 7/392 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDY 162
           +L  LC A K  +A++++  M      P+A +Y  ++   C +G V  A+ ++ +M E  
Sbjct: 120 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 175

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHA 221
           G   N  TY +++ G C +G ++++++  D ++ KG V P A  Y+ L+     +  +  
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+   D ++ +G    + +YN+L+  L  +GR  EA     ++  KG  P+V +YNIL+ 
Sbjct: 236 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 295

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C EG  ++A E+   M       T+VTY  LI +L+  G+     K+ DE V+   RP
Sbjct: 296 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 355

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
               YN +I    + G +D   + + +M  +R  P++ TYN L   LC +G+V EA  +I
Sbjct: 356 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 415

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +  +        Y  +I+    KG    A ++  EM   GF P   TY++LI+GLC  
Sbjct: 416 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 475

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           G  ++A  +   M E    PD   + +L+ GL
Sbjct: 476 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 1/308 (0%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++A    + M++KG  KP+ V    L+   C   K+  A+   + MV  G+    ++Y
Sbjct: 196 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 255

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             LV+ L   G    A +LVE+M   G   +  TYN L+ G C  GN+ ++L+  + + +
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+     TY+ L+ A  K+  V    KL D+ + +G +P+LV YN L+      G  + 
Sbjct: 316 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 375

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++  K   P+ V+YN L+R LC+ GR +EA +L+ EM      P +VTYN LI 
Sbjct: 376 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 435

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             +  G    AL++ +EM+   F P+  +YN +I  LC  G+ D     + +M      P
Sbjct: 436 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 495

Query: 377 NEGTYNGL 384
           ++ TY  L
Sbjct: 496 DDSTYISL 503



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 150/279 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A L  +RMV +G    V     L++ L    +  +A +++E M   G+ PD  +Y 
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK+GNV  A+++ E M   G     VTY +L+  L   G + ++ +  D  +++
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   Y+ L+ +      +  A +++ ++  K   P+ V+YN L+ GLC  GR +EA
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +   ++  +G +P++V+YN L+    M+G  ++A  +  EM     +PT++TYN LI  
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 471

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           L  +G+ D A  ++ EMV+    P  ++Y  +I  L +E
Sbjct: 472 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 176/395 (44%), Gaps = 42/395 (10%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A  L   M     P  T T+N ++R LC  G   ++L+ L ++                 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----------------- 140

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FE 270
                                  +PN V+YN ++ G C  GR + A+   R++  +G   
Sbjct: 141 ----------------------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 178

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           PN  +Y  ++   C  GR +EA ++  EM   G+  P  V YN LIG     GK D AL 
Sbjct: 179 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 238

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LC 388
             D MV+     + A+YN ++  L  +G+     + +++M  +   P+  TYN L    C
Sbjct: 239 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 298

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             G V++A  I +++  +   +    Y  +I +L +KG+  +  +L  E  + G  PD  
Sbjct: 299 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 358

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
            Y++LI      G I+ A EI   ME+    PD   +N L+ GLC   R D + ++   M
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 418

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            E+G  P+  TY  L+ G + + +++ +  +  E+
Sbjct: 419 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 453



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 157/314 (50%), Gaps = 9/314 (2%)

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            ++N++L  LC  G+   A+   R +P     PN V+YN ++   C  GR + A +++ E
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 170

Query: 299 M-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSE 356
           M + G  +P   TY  +I      G+ D A+KV DEM+ KG  +P A  YN +I   C +
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF- 414
           GK+D  +   D+M  R       TYN L   L   G+  EA+ +++ +G K   +P  F 
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK-GLAPDVFT 289

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I   C++G   +A ++   M++ G      TY++LI  L  +G ++E  ++F    
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               +PD+  +NAL+     S   D + E+   M +K   P++ TY  L+ G+     ++
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 535 LSAEVLKELQLRQV 548
            + +++ E+  R +
Sbjct: 410 EARKLIDEMTERGI 423



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 131/243 (53%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D +  +A+  +E M  KG  PDV     L+   CK   +KKA+++ E M   G+     +
Sbjct: 265 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 324

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L+  L KKG V    +L ++    G   + V YN+L+      GN++++ + +  + 
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 384

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K + P+  TY+ L+        V  A KL+D++  +G +P+LV+YN L++G   +G  +
Sbjct: 385 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+R   ++ +KGF P +++YN L++ LC  G+ ++A  ++ EM     +P   TY  LI
Sbjct: 445 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504

Query: 316 GSL 318
             L
Sbjct: 505 EGL 507



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 119/217 (54%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E M  +G +  VV  T L+Y L K  ++++  K+ +  V  GI PD   Y  L+N    
Sbjct: 310 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 369

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A +++ +ME      + VTYN+L+RGLC+LG ++++ + +D + ++G+ P+  T
Sbjct: 370 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 429

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+     +  V  A+++ ++++ KG  P L++YN L+ GLCK G+ ++A    +++ 
Sbjct: 430 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 489

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
             G  P+  +Y  L+  L  E      +E LA  D  
Sbjct: 490 ENGITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 526



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF L  +M +      + T++ ++R LC  G    ALE+   M     +P+   +N ++ 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 153

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           G C   R   +L++ + M E+G + PN+ TY  ++ G      ++ + +V  E+  +  V
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 550 SESAV 554
              AV
Sbjct: 214 KPEAV 218


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 230/479 (48%), Gaps = 2/479 (0%)

Query: 68  NNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA-IKVMEMMVS 126
           + ND       ++DA      M+ +   P ++Q   LL  + K  +     I + + M  
Sbjct: 62  HKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMEL 121

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
            G+ P+  + +  +NC C+   V     ++ K+   G     VT+ +L+ GLC +G   Q
Sbjct: 122 VGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQ 181

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +++  D ++ KG  P+ +TY+ ++    K     AA  LL  +   G +PN+V+Y+ L+ 
Sbjct: 182 AVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLID 241

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            LC++    EA+  F  + +KG  P++ +Y  L++ LC   RW+EA+ LL EM   +  P
Sbjct: 242 SLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMP 301

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            IVT+N+L+ +    GK   AL VL  M +    P+  +Y+ ++        V    K  
Sbjct: 302 DIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF 361

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             M  + CKPN  +YN L    C   ++ EA  +   + ++  +     Y  +I   C+ 
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +A  L   M   G  PD +TYS L+ G C +G + +A  +F  M+    KP++  +
Sbjct: 422 GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 481

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             L+  +CKS     + ++F  +  +G  P+   YT ++ G+  +  L+ + E  + ++
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 223/437 (51%), Gaps = 1/437 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +++  F  L +++  G +P +V  T L+  LCK  +  +A+++ + MV+ G  PD  +Y
Sbjct: 142 QRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTY 201

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++N LCK G    A  L++KME+ G   N VTY++L+  LC    +N++L     +  
Sbjct: 202 NTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKA 261

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ P+ FTY+ L++   K      A  LL+++ +    P++V++NVL+   CKEG+  E
Sbjct: 262 KGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSE 321

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+   + +   G EPNVV+Y+ L+    +     EA +L   M      P I +YNILI 
Sbjct: 322 ALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILIN 381

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A+++ +EM+     P+  SYN +I   C  GK+         M      P
Sbjct: 382 GYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLP 441

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY+ L    C  G + +AF + +++ +         Y  ++ ++C+ G    A +L 
Sbjct: 442 DLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLF 501

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            E+   G  P    Y+++I GLC EGL++EALE F  ME     PD  ++N ++ GL + 
Sbjct: 502 SELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQH 561

Query: 496 RRTDLSLEVFQMMIEKG 512
           +    +L +   M ++G
Sbjct: 562 KDESRALLLVGEMRDRG 578



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 166/312 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  RD  +N+A      M +KG  PD+   T+L+  LCK ++ K+A  ++  M S  I+
Sbjct: 241 DSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIM 300

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  LV+  CK+G V  A+ +++ M + G   N VTY+SL+ G  +  ++ ++ + 
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL 360

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +I KG  PN F+Y+ L+    K + +  AM+L +++I +G  PN VSYN L+ G C+
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA   FR++ + G  P++ +Y+ILL   C +G   +A  L   M      P +V 
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 480

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y IL+ ++   G    A K+  E+     +P    Y  II  LC EG +D  ++    M 
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540

Query: 371 HRRCKPNEGTYN 382
              C P+E +YN
Sbjct: 541 ADGCPPDEISYN 552



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 150/289 (51%), Gaps = 3/289 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++ K+++A   L+ M   G +P+VV  ++L+Y       + +A K+  +M++ G  
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCK 370

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SY  L+N  CK   +  AMQL  +M   G   N V+YN+L+ G C LG L ++   
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G +P+ FTYS LL+   K+  +  A +L   + +   KPNLV Y +L+  +CK
Sbjct: 431 FRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCK 490

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A + F +L  +G +P+V  Y  ++  LC EG  +EA E    M+     P  ++
Sbjct: 491 SGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEIS 550

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           YN++I  L  H     AL ++ EM   R R   A   P ++ +C   KV
Sbjct: 551 YNVIIRGLLQHKDESRALLLVGEM---RDRGFIADVRPCLSEVCQGKKV 596


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 236/513 (46%), Gaps = 37/513 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ +  +A+   + M  +G   D V  T L+ +L +  K+ +A  V + M S G +
Sbjct: 64  DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  + + +++ L K G +G A+++ + ME  G   N V Y++L+ GLC    ++ +L+ 
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L ++ +    P+  TY+ L++   K   V AA    D+++  G KP++ +YN+L++G CK
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243

Query: 251 EGRT------------------------------------EEAIRFFRDLPSKGFEPNVV 274
            G T                                    EEA+     + + G  P + 
Sbjct: 244 AGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIA 303

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YN LL  LC  GR EEA +LL ++     +P +VTY  LI  L    ++  A K+  EM
Sbjct: 304 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 363

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKV 393
                      Y  +I  L   GK+         M    C P+  T + +   L   G++
Sbjct: 364 ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 423

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
             A  I +S+  +  +  +  Y  +I  LC+  K   A ++L +M K   TPD+ TY+ L
Sbjct: 424 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 483

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I GLC  G +E A   F  M E   KPDV  +N L+ G CK+  TD +  VF  M     
Sbjct: 484 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 543

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             N  TY  L+ G+  + +L  ++   + ++ R
Sbjct: 544 SANVVTYGALISGLCKRRQLTKASLYFQHMKER 576



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 233/469 (49%), Gaps = 2/469 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   +E++ + G  P +     LL  LCK  ++++AI ++  +V +G  PD  +YT
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L K+     A +L ++M   G   +TV Y +L+R L   G + Q+      +   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G VP+  T S +++   K   + AA+++   + A+G  PN V Y+ L+ GLCK  + + A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     +      P+ ++YN+L+  LC  G  E A     EM      P + TYNILI  
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 318 LAYHGKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
               G TD A   L  E           +Y  I+  L    K++  V  ++++    C P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
              TYN L   LC +G+++EA  +++ + +   +     Y  +I  L ++ ++++A++L 
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G   D+  Y++LIR L   G I +A  ++  M  +   PDV   + ++ GL K+
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            R   ++ +F+ M  +G  PNE  Y+ L+ G+    +++ + E+L +++
Sbjct: 421 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 469



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 207/445 (46%), Gaps = 4/445 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++  A    + M ++G  P+ V  + L++ LCKA KM  A++++  M  +   
Sbjct: 134 DGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 193

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L++ LCK G+V  A    ++M + G   +  TYN L+ G C  GN + +   
Sbjct: 194 PDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHS 253

Query: 191 LDR-LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           L +     G   +  TY+ +++   K + +  A+ L++ I A G  P + +YN LL GLC
Sbjct: 254 LAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLC 313

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K GR EEAI   R +   G  P+VV+Y  L+  L  E R  EA +L  EM     +   V
Sbjct: 314 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 373

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            Y  LI  L   GK   A  V   M      P   + + +I  L   G++   V+    M
Sbjct: 374 CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 433

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGK 427
             R   PNE  Y+ L   LC   K+  A  ++  +  K   +P    Y  +I  LC+ G 
Sbjct: 434 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGD 492

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A     EM + G  PD YTY+ LI G C  G  + A  +F  M       +V  + A
Sbjct: 493 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGA 552

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ GLCK R+   +   FQ M E+G
Sbjct: 553 LISGLCKRRQLTKASLYFQHMKERG 577



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           IEEA+ +   +      P +  +NALL GLCK  R + ++++ + +++ G  P+  TYT 
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 523 LVEGIAHQDELELSAEVLKELQLR----QVVSESAVERLVMQ 560
           L++G+  +     + ++ KE+ LR      V  +A+ R ++Q
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQ 103


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 227/453 (50%), Gaps = 1/453 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++ ++AF     M  KG  P +    +LL    K N+ + A  +   M    I     ++
Sbjct: 165 NRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTF 224

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++N LCK+G +  A   V  ME  G   N VTYN++V G C  G +  +   L  + +
Sbjct: 225 NIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKR 284

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           + + P++FTY  L+    K+  +  A K+ ++++ KG +P+ V YN L+ G C +G  + 
Sbjct: 285 QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDM 344

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A  +  ++  KG  P + +YN L+ +L ME R +EA  ++ E+     SP  +TYNILI 
Sbjct: 345 ASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                     A  + DEM+    +P+  +Y  ++  L  + ++        ++      P
Sbjct: 405 GYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLP 464

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +   +N L    C    V+ AF +++ +   +    +  +  ++   CR+GK  +A +L 
Sbjct: 465 DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM + G  PD  ++++LI G    G I++A  +   M +  + P V  +NAL+ GLCK+
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +  DL+ E+ + M+ KG  P++TTY  L+EGIA
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 201/392 (51%), Gaps = 1/392 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL  A   +  M + G KP++V    +++  C + +++ A  ++  M    I PD+ 
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ +CK+G +  A ++ E+M   G   + V YN+L+ G C  GNL+ +  + D +
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG+ P   TY+ L+ A + E+    A  ++ +I  KG  P+ ++YN+L+ G C+    
Sbjct: 353 LKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANA 412

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A     ++ + G +P   +Y  LL  L  + R +EA++L  ++      P ++ +N L
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNAL 472

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     +     A ++L +M + +  P   ++N I+   C EGKV+   +  D+M  R  
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI 532

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+  ++N L +     G +++AF +   + +   +     Y  ++  LC+  +   A +
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEE 592

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           LL EM   G TPD  TY +LI G+    + +E
Sbjct: 593 LLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 189/383 (49%), Gaps = 1/383 (0%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +++ ++ L++  C +   +++ +    + +KG++P   T + LL    K     AA  L 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            ++     K ++ ++N+++  LCKEG+ ++A  F   + + G +PN+V+YN ++   C  
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GR E A+ +L  M      P   TY  LI  +   G+ + A K+ +EMV+   RPSA  Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
           N +I   C++G +D+     D+M  +   P   TYN L   L    +  EA  +I+ +  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K  S     Y  +I   CR     +AF L  EM   G  P   TY+SL+  L  +  ++E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A ++F  +      PDV  FNAL+ G C +     + E+ + M      P+E T+  +++
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 526 GIAHQDELELSAEVLKELQLRQV 548
           G   + ++E + E+  E++ R +
Sbjct: 510 GHCREGKVEEARELFDEMKRRGI 532



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 219/511 (42%), Gaps = 43/511 (8%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI---I 130
           H  HKL+DA      +V     P    A +LL             ++ E + +S      
Sbjct: 89  HFHHKLSDARTLCLAIVIVARLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGF 148

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
             +  + YL+   C       A +    M++ G      T NSL+     L     +   
Sbjct: 149 KSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVL 208

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV------- 243
              + +  +  + +T++ ++    KE  +  A   +  +   G KPN+V+YN        
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268

Query: 244 ----------------------------LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                                       L++G+CK+GR EEA + F ++  KG  P+ V 
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN L+   C +G  + A+    EM     SPT+ TYN LI +L    +TD A  ++ E+ 
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
           +    P A +YN +I   C            D+M     KP + TY   L +L    +++
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  + + + ++        +  +I   C       AF+LL +M +    PD  T+++++
Sbjct: 449 EADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL--SLEVFQMMIEKG 512
           +G C EG +EEA E+F  M+    KPD  +FN L+ G   SRR D+  +  V   M++ G
Sbjct: 509 QGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGY--SRRGDIKDAFRVRNEMLDTG 566

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             P   TY  LV+G+    E +L+ E+LKE+
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 7/328 (2%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G K ++V ++ L+   C   R +EA   F  +  KG  P + + N LL       R E A
Sbjct: 147 GFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             L AEM       ++ T+NI+I  L   GK   A   +  M     +P+  +YN I+  
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSP 411
            CS G+V+     L  M  ++ +P+  TY  L + +C  G+++EA  I + +  K     
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I   C KG    A     EM K G +P   TY+SLI  L ME   +EA  +  
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIK 385

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            ++E    PD   +N L+ G C+      +  +   M+  G  P + TYT L+  ++ ++
Sbjct: 386 EIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKN 445

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVM 559
            ++ + ++ K     ++ SE  +  ++M
Sbjct: 446 RMKEADDLFK-----KITSEGVLPDVIM 468



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 67/160 (41%)

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++E F  + +  ++        + Y+I S C   +  +AF+  Y M + G  P   T +S
Sbjct: 132 IREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNS 191

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+         E A  ++  M     K  V  FN ++  LCK  +   + +    M   G
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG 251

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             PN  TY  +V G      +E +  +L  ++ +++  +S
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 231/455 (50%), Gaps = 2/455 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDA 133
           R  +L   F     ++  G + +V+  + LL  LC A ++ +A  ++ + +S  G  PD 
Sbjct: 102 RMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDV 161

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  ++N   ++G V  A  L  +M D G P N VTY +++ GLC    ++++     +
Sbjct: 162 VAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQ 221

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +I +G+ P+  TY+ L+            +++L+++   G +P+ ++Y +LL  LCK GR
Sbjct: 222 MIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGR 281

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA  FF  +  KG +P+V  Y ILL     +G   E +  L  M G   SP    +NI
Sbjct: 282 CREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNI 341

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +  + A     + A+ + ++M +    P   S+  +I  LC  G+VD  V   +QM +  
Sbjct: 342 MFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG 401

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             PN   ++ L   LC VGK ++A  +   + ++       F+  ++ +LC +G+  +A 
Sbjct: 402 VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQ 461

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L+  M + G  P+  +Y++L+ G C+ G I+EA ++  VM     KP+   +  LL G 
Sbjct: 462 RLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGY 521

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           CK+RR D +  +F+ M+ KG  P   TY  ++ G+
Sbjct: 522 CKARRVDDAYSLFREMLMKGVTPVVATYNTILHGL 556



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 225/449 (50%), Gaps = 1/449 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+ +G KPD      L++      K K+ ++++E M + G+ PD  +Y  L++ LCK
Sbjct: 219 FQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCK 278

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A    + M   G   +   Y  L+ G    G L++   FLD ++  G+ PN   
Sbjct: 279 NGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRI 338

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ +  A  K+  +  AM + + +  +G  P++VS+  L+  LCK GR ++A+  F  + 
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMI 398

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           ++G  PN+  ++ L+  LC  G+WE+A EL  E+         V +N L+ +L   G+  
Sbjct: 399 NEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVM 458

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A +++D M++   RP+  SYN ++A  C  G++D   K LD M     KPNE TY  L 
Sbjct: 459 EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILL 518

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C   +V +A+++ + +  K  +     Y  ++  L + G+  +A +L   M      
Sbjct: 519 RGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTK 578

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            D YTY+ ++ GLC    ++EA ++F  +   D + D   FN ++  L K  R + ++++
Sbjct: 579 CDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDL 638

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           F  +   G +P+  TY ++ E +  +  L
Sbjct: 639 FATISAYGLVPDVVTYRLIAENLIEEGSL 667



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 238/489 (48%), Gaps = 5/489 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++  A+     M+ +G  P+VV  T ++  LCKA  + +A  V + M+  G+ PD  
Sbjct: 173 REGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNG 232

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++     G     +Q++E+M  +G   + +TY  L+  LC  G   ++  F D +
Sbjct: 233 TYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSM 292

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAM-KLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            +KG+ P+   Y+ LL   Y  +G  + M   LD ++  G  PN   +N++     K+  
Sbjct: 293 FRKGIKPDVAIYAILLHG-YATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAM 351

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA+  F  +  +G  P+VVS+  L+ +LC  GR ++A     +M     +P I  ++ 
Sbjct: 352 IEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSS 411

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L   GK + A ++  E++       A  +N ++  LC+EG+V    + +D M    
Sbjct: 412 LVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVG 471

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
            +PN  +YN L A  C  G++ EA  ++  + +     P EF Y  ++   C+  +   A
Sbjct: 472 VRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS-NGLKPNEFTYTILLRGYCKARRVDDA 530

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           + L  EM   G TP   TY++++ GL   G   EA E+++ M     K D+  +N +L G
Sbjct: 531 YSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNG 590

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           LCK+   D + ++F+ +  K    +  T+ I++  +      E + ++   +    +V +
Sbjct: 591 LCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPD 650

Query: 552 SAVERLVMQ 560
               RL+ +
Sbjct: 651 VVTYRLIAE 659



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 215/470 (45%), Gaps = 4/470 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +  +A L  + M  KG KPDV     LL+       + +    +++MV +G+ P+  
Sbjct: 278 KNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRR 337

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  +     KK  +  AM +  KM   G   + V++ +L+  LC LG ++ ++   +++
Sbjct: 338 IFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQM 397

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +G+ PN F +S L+           A +L  +++ +G   + V +N L+  LC EGR 
Sbjct: 398 INEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRV 457

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA R    +   G  PNV+SYN L+   C+ GR +EA +LL  M      P   TY IL
Sbjct: 458 MEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTIL 517

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +       + D A  +  EM+     P  A+YN I+  L   G+     +    M + R 
Sbjct: 518 LRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRT 577

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           K +  TYN  L  LC    V EAF + + L +K        +  +I +L + G+   A  
Sbjct: 578 KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMD 637

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   ++ YG  PD  TY  +   L  EG + E   +F  ME+    P+    NAL+  L 
Sbjct: 638 LFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLL 697

Query: 494 KSRRTDLSLE-VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
              R D+S   V+   +++     E + T ++  +  + E +  A+ L E
Sbjct: 698 --HRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSLPE 745



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 163/415 (39%), Gaps = 79/415 (19%)

Query: 218 GVHAAMKLLDD------------------IIAKGG-----------------------KP 236
           G+  A+KL D+                  ++++ G                        P
Sbjct: 29  GLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAP 88

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE-L 295
           N  +Y++L+   C+ GR E     F  +   G+  NV+  + LL+ LC   R +EA + L
Sbjct: 89  NACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDIL 148

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L  M      P +V YN +I      G+ + A  +  EM+     P+  +Y  +I  LC 
Sbjct: 149 LLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCK 208

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
              VD       QM  R  KP+ GTYN L       GK +E   +++ +           
Sbjct: 209 AQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCIT 268

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG------------- 461
           Y  ++  LC+ G+  +A      M + G  PD   Y+ L+ G   +G             
Sbjct: 269 YALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMV 328

Query: 462 ----------------------LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
                                 +IEEA+ IF  M +    PDV +F AL+  LCK  R D
Sbjct: 329 GNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVD 388

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            ++  F  MI +G  PN   ++ LV G+    + E + E+  E+ L Q +   AV
Sbjct: 389 DAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV-LDQGICVDAV 442


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 228/469 (48%), Gaps = 5/469 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  KG  P+    T +   LC+A +M +A    E M  +G+ PD ++ + L++   ++G+
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +   +++ + M   G P N +TYN L+ GLC  G + ++ + L  +I  G  PN+ T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+E   +E  +  A++LLD++  +   P+ VSY  ++ GLC       A +    +   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +PNVV Y+ L+     EGR EEA  LL  M     +P I  YN +I  L+  GK + A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
             L E+     +P A ++   I      GK+    K  D+M      PN   Y    ++ 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT--VLIN 298

Query: 389 G---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
           G    G + EA +I + L         +     I  L + G+  +A ++  E+ + G  P
Sbjct: 299 GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 358

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D +TYSSLI G C +G +E+A E+   M      P++  +NAL+ GLCKS     + ++F
Sbjct: 359 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 418

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             M EKG  P+  TY+ +++G    + +  +  +  E+  + V   S V
Sbjct: 419 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 467



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 238/491 (48%), Gaps = 7/491 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++N+A L  E M   G KPD    + L+    +   + + +++ ++MVS GI  +  
Sbjct: 22  RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 81

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK G +  A ++++ M   G   N+ T+  L+ G C   N+ ++L+ LD +
Sbjct: 82  TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 141

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ LVP+A +Y  ++      + +  A KLL+ +   G KPN+V Y+ L+ G   EGR 
Sbjct: 142 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA R    +   G  P++  YN ++  L   G+ EEA+  L E+ G    P  VT+   
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  GK   A K  DEM+     P+   Y  +I      G +   +     +     
Sbjct: 262 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 321

Query: 375 KPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
            P+  T +  A + G+   G+VQEA  +   L  K    P  F Y  +I+  C++G+  +
Sbjct: 322 LPDVQTCS--AFIHGLLKNGRVQEALKVFSELKEK-GLVPDVFTYSSLISGFCKQGEVEK 378

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF+L  EM   G  P+ + Y++L+ GLC  G I+ A ++F  M E   +PD   ++ ++ 
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 438

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           G CKS     +  +F  M  KG  P+   Y  LV G   + ++E +  + +E+  +   +
Sbjct: 439 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT 498

Query: 551 ESAVERLVMQY 561
             +   L+  Y
Sbjct: 499 TLSFNTLIDGY 509



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 227/475 (47%), Gaps = 20/475 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE+M   G KP+VV  + L+       ++++A ++++ M  SG+ PD   Y  +++CL K
Sbjct: 173 LEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 232

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A   + +++  G   + VT+ + + G    G + ++ ++ D ++  GL+PN   
Sbjct: 233 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 292

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+   +K   +  A+ +   + A G  P++ + +  + GL K GR +EA++ F +L 
Sbjct: 293 YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 352

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+V +Y+ L+   C +G  E+A EL  EM     +P I  YN L+  L   G   
Sbjct: 353 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 412

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A K+ D M +    P + +Y+ +I   C    V        +M  +  +P+   YN L 
Sbjct: 413 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 472

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G +++A  + + +  K  ++   F   +I   C+  K  +A QL  EM      
Sbjct: 473 HGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIM 531

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY+++I   C  G +EEA  +F  M+E                  ++   D    +
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQE------------------RNLIVDTVFAL 573

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           F+ M+ KG  P+E TY +++     +D L  + ++  E+  + ++++  +  L++
Sbjct: 574 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 628



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 222/484 (45%), Gaps = 19/484 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   L  +  +G KPD V     +    K  KM +A K  + M+  G++P+   YT
Sbjct: 235 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 294

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N   K GN+  A+ +   +   G   +  T ++ + GL   G + ++L+    L +K
Sbjct: 295 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 354

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLVP+ FTYS L+    K+  V  A +L D++  KG  PN+  YN L+ GLCK G  + A
Sbjct: 355 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 414

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F  +P KG EP+ V+Y+ ++   C      EA  L  EM      P    YN L+  
Sbjct: 415 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 474

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  + A+ +  EM++  F  +  S+N +I   C   K+    +   +M  ++  P+
Sbjct: 475 CCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533

Query: 378 EGTYNG-LAMLCGVGKVQEA-----------------FAIIQSLGNKQNSSPQEFYKYVI 419
             TY   +   C  GK++EA                 FA+ + +  K     +  Y  VI
Sbjct: 534 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVI 593

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
            + C++    +AF+L  E+   G       +  LI  LC    + EA ++   M E   K
Sbjct: 594 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 653

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P +   + L+    ++ + D +  VF+ +   G +P+ TT   LV G  +  + E +  +
Sbjct: 654 PSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 713

Query: 540 LKEL 543
           +K+L
Sbjct: 714 IKQL 717



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 18/243 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   + +AF     M SKG +P       L++  CK   M+KA+ +   M+  G  
Sbjct: 438 DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF- 496

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS--- 187
               S+  L++  CK   +  A QL ++M       + VTY +++   C  G + ++   
Sbjct: 497 ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 556

Query: 188 --------------LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
                             ++++ KG+ P+  TY  ++ A  KE  +  A KL D+++ KG
Sbjct: 557 FKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 616

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
                  +++L+T LCK     EA +   ++   G +P++ + + L+RS    G+ +EA 
Sbjct: 617 MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEAT 676

Query: 294 ELL 296
            + 
Sbjct: 677 RVF 679



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 18/242 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +  A      M+ KG     +    L+   CK+ K+++A ++ + M++  I+PD  
Sbjct: 477 KEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 535

Query: 135 SYTYLVNCLCKKGN-----------------VGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
           +YT +++  CK G                  V     L EKM   G   + VTY  ++  
Sbjct: 536 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYA 595

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
            C   NL ++ +  D ++ KG++     +  L+ A  K   +  A KLLD++   G KP+
Sbjct: 596 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 655

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           L + + L+    + G+ +EA R F  + S G  P+  +   L+     +   E+A  L+ 
Sbjct: 656 LAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIK 715

Query: 298 EM 299
           ++
Sbjct: 716 QL 717



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 82/160 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           + + R+  ++  F   E+MV+KG KPD V    ++Y  CK + + +A K+ + +V  G++
Sbjct: 559 EMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 618

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
              + +  L+  LCK+ ++  A +L+++M + G   +    ++LVR     G ++++ + 
Sbjct: 619 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 678

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
            + +   GLVP+  T   L+     +     A  L+  ++
Sbjct: 679 FEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 222/457 (48%), Gaps = 1/457 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P      N+L  L         I + +    +GI PD  + + L+NC C + ++  A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
              +   G+  N +T N+L++GLC  G + ++L F D+L+ +G   +  +Y  L+    K
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                A  +LL  +     KP++V YN ++  LCK     +A   + ++  KG  P+VV+
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+   C+ G  +EA  LL EM   + +P + T+NILI +L+  GK   A  +L  M+
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY-NGLAMLCGVGKVQ 394
           K   +P   +YN +I       +V         M  R   P+   Y N +  LC    V 
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA ++ + + +K        Y  +I  LC+     +A  L   M + G  PD Y+Y+ L+
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC  G +E+A EIF  +    Y  +V  +  L+  LCK+   D +L++   M +KG M
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM 474

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           P+  T+ I++  +  +DE + + ++L+E+  R ++ E
Sbjct: 475 PDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 208/440 (47%), Gaps = 5/440 (1%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +  +++ L    +    + L ++ E  G   +  T + L+   C   ++  +   
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++++G  PNA T + L++       +  A+   D ++A+G + + VSY  L+ GLCK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G T+   R  R L     +P+VV YN ++ SLC      +A ++ +EM     SP +VT
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI      G    A  +L+EM      P+  ++N +I  L  EGK+      L  M 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 371 HRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
               KP+  TYN L  + G   V +V+ A  +  S+  +  +   + Y  +I  LC+   
Sbjct: 295 KACIKPDVFTYNSL--IDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKM 352

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A  L  EM      PD  TY+SLI GLC    +E A+ +   M+E   +PDV ++  
Sbjct: 353 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTI 412

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           LL GLCKS R + + E+FQ ++ KG   N   YT+L+  +      + + ++  +++ + 
Sbjct: 413 LLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKG 472

Query: 548 VVSESAVERLVMQYDFEGIE 567
            + ++    ++++  FE  E
Sbjct: 473 CMPDAVTFDIIIRALFEKDE 492



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 125/229 (54%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A + L  M+    KPDV    +L+      +++K A  V   M   G+ 
Sbjct: 275 DALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVT 334

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   YT ++N LCK   V  AM L E+M+      + VTYNSL+ GLC   +L +++  
Sbjct: 335 PDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIAL 394

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ ++G+ P+ ++Y+ LL+   K   +  A ++   ++AKG   N+ +Y VL+  LCK
Sbjct: 395 CKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCK 454

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            G  +EA+     +  KG  P+ V+++I++R+L  +   ++A ++L EM
Sbjct: 455 AGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 217/410 (52%), Gaps = 7/410 (1%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +++  ++  LC  G    A++L+ +M       N VTYN+++ G C  G +  +L  +  
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 544

Query: 194 LIQKG-LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKE 251
           + ++G + PN +TY  ++    K   V  A+K+ D+++ KG  KP  V YN L+ G C +
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ + A+ +   +  +G    V +YN+L+ +L M+GR  EA EL+ EM G   +P + TY
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI      G    AL++ + M +   R +  +Y  +I  L  +G+V    K  D+   
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 372 RRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R  +P+   YN L       G +  AF I+  +  K+ +     Y  ++  LC  G+  +
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L+ EMT+ G  PD  TY++LI G  M+G +++AL I   M    + P +  +NAL+ 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           GLCK+ + D +  + + M+E G  P+++TY  L+EG+  +DE  +  E L
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERL 894



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 196/392 (50%), Gaps = 7/392 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDY 162
           +L  LC A K  +A++++  M      P+A +Y  ++   C +G V  A+ ++ +M E  
Sbjct: 494 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 549

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHA 221
           G   N  TY +++ G C +G ++++++  D ++ KG V P A  Y+ L+     +  +  
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+   D ++ +G    + +YN+L+  L  +GR  EA     ++  KG  P+V +YNIL+ 
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 669

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C EG  ++A E+   M       T+VTY  LI +L+  G+     K+ DE V+   RP
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
               YN +I    + G +D   + + +M  +R  P++ TYN L   LC +G+V EA  +I
Sbjct: 730 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +  +        Y  +I+    KG    A ++  EM   GF P   TY++LI+GLC  
Sbjct: 790 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 849

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           G  ++A  +   M E    PD   + +L+ GL
Sbjct: 850 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 1/308 (0%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++A    + M++KG  KP+ V    L+   C   K+  A+   + MV  G+    ++Y
Sbjct: 570 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 629

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             LV+ L   G    A +LVE+M   G   +  TYN L+ G C  GN+ ++L+  + + +
Sbjct: 630 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+     TY+ L+ A  K+  V    KL D+ + +G +P+LV YN L+      G  + 
Sbjct: 690 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 749

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++  K   P+ V+YN L+R LC+ GR +EA +L+ EM      P +VTYN LI 
Sbjct: 750 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 809

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             +  G    AL++ +EM+   F P+  +YN +I  LC  G+ D     + +M      P
Sbjct: 810 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 869

Query: 377 NEGTYNGL 384
           ++ TY  L
Sbjct: 870 DDSTYISL 877



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 150/279 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A L  +RMV +G    V     L++ L    +  +A +++E M   G+ PD  +Y 
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK+GNV  A+++ E M   G     VTY +L+  L   G + ++ +  D  +++
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   Y+ L+ +      +  A +++ ++  K   P+ V+YN L+ GLC  GR +EA
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +   ++  +G +P++V+YN L+    M+G  ++A  +  EM     +PT++TYN LI  
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 845

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           L  +G+ D A  ++ EMV+    P  ++Y  +I  L +E
Sbjct: 846 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 176/395 (44%), Gaps = 42/395 (10%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A  L   M     P  T T+N ++R LC  G   ++L+ L ++                 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----------------- 514

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FE 270
                                  +PN V+YN ++ G C  GR + A+   R++  +G   
Sbjct: 515 ----------------------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 552

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           PN  +Y  ++   C  GR +EA ++  EM   G+  P  V YN LIG     GK D AL 
Sbjct: 553 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 612

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LC 388
             D MV+     + A+YN ++  L  +G+     + +++M  +   P+  TYN L    C
Sbjct: 613 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 672

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             G V++A  I +++  +   +    Y  +I +L +KG+  +  +L  E  + G  PD  
Sbjct: 673 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 732

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
            Y++LI      G I+ A EI   ME+    PD   +N L+ GLC   R D + ++   M
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 792

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            E+G  P+  TY  L+ G + + +++ +  +  E+
Sbjct: 793 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 827



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 157/314 (50%), Gaps = 9/314 (2%)

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            ++N++L  LC  G+   A+   R +P     PN V+YN ++   C  GR + A +++ E
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 544

Query: 299 M-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSE 356
           M + G  +P   TY  +I      G+ D A+KV DEM+ KG  +P A  YN +I   C +
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF- 414
           GK+D  +   D+M  R       TYN L   L   G+  EA+ +++ +G K   +P  F 
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK-GLAPDVFT 663

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I   C++G   +A ++   M++ G      TY++LI  L  +G ++E  ++F    
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               +PD+  +NAL+     S   D + E+   M +K   P++ TY  L+ G+     ++
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 783

Query: 535 LSAEVLKELQLRQV 548
            + +++ E+  R +
Sbjct: 784 EARKLIDEMTERGI 797



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 131/243 (53%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D +  +A+  +E M  KG  PDV     L+   CK   +KKA+++ E M   G+     +
Sbjct: 639 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 698

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L+  L KKG V    +L ++    G   + V YN+L+      GN++++ + +  + 
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 758

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K + P+  TY+ L+        V  A KL+D++  +G +P+LV+YN L++G   +G  +
Sbjct: 759 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+R   ++ +KGF P +++YN L++ LC  G+ ++A  ++ EM     +P   TY  LI
Sbjct: 819 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878

Query: 316 GSL 318
             L
Sbjct: 879 EGL 881



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 119/217 (54%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E M  +G +  VV  T L+Y L K  ++++  K+ +  V  GI PD   Y  L+N    
Sbjct: 684 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 743

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A +++ +ME      + VTYN+L+RGLC+LG ++++ + +D + ++G+ P+  T
Sbjct: 744 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 803

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+     +  V  A+++ ++++ KG  P L++YN L+ GLCK G+ ++A    +++ 
Sbjct: 804 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 863

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
             G  P+  +Y  L+  L  E      +E LA  D  
Sbjct: 864 ENGITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 900



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF L  +M +      + T++ ++R LC  G    ALE+   M     +P+   +N ++ 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 527

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           G C   R   +L++ + M E+G + PN+ TY  ++ G      ++ + +V  E+  +  V
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 550 SESAV 554
              AV
Sbjct: 588 KPEAV 592


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 244/474 (51%), Gaps = 7/474 (1%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           D V    +L  LC+      A   +  +++    P A SYT L+  LC +   G A+ L+
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
             M+  G   + VTY +L+RGLC   +++++++ L  + + G+ PN   YS LL+   K 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
                  K+ +++  +G +P++V Y  L+  LC+EG+ ++A +    +  +G EPNVV+Y
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N+L+ S+C EG  +EA  L   M     +   VTYN LI  L+   + D A+ +L+EM+ 
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 337 GR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKV 393
           G     P+  ++N +I  LC  G++    +  D M    C  N  T+N L   L  V KV
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 394 QEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++A  ++  + +     P  F Y  +I   C+  +  +A  LL +M + G  P+   Y  
Sbjct: 377 KKAMELMDEMAS-SGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIP 435

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+  LC +G++E+A   F  M + + K DV  ++ ++ G C+ R    + E  + M+++G
Sbjct: 436 LLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV-ERLVMQYDFEG 565
            +P+  TY++L+   A+  +L  +  VLK++     V + AV + L+  Y  +G
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKG 548



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 158/336 (47%), Gaps = 38/336 (11%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  R+ K+  A   +++M+ +G +P+VV    L+  +CK   +K+A+ +   M+  G+ 
Sbjct: 226 DSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVA 285

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKM---EDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
            DA +Y  L+  L     +  AM L+E+M   E    P N VT+NS++ GLC  G + Q+
Sbjct: 286 LDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEP-NVVTFNSVIHGLCKTGRMRQA 344

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
            Q  D + + G   N  T++ L+    +   V  AM+L+D++ + G +P+  +Y++L+ G
Sbjct: 345 FQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILING 404

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG----- 302
            CK  + + A      +   G EP +V Y  LL +LC +G  E+A     EM        
Sbjct: 405 FCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDV 464

Query: 303 --------------DRS---------------PTIVTYNILIGSLAYHGKTDHALKVLDE 333
                         DR                P  VTY++LI   A  G    A +VL +
Sbjct: 465 VAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQ 524

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           M    F P  A ++ +I    ++G  + V++ + +M
Sbjct: 525 MTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 1/226 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  AF   + M   G   ++V    L+  L + +K+KKA+++M+ M SSG+ PD+ +Y+
Sbjct: 340 RMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYS 399

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK   V  A  L+ KM   G     V Y  L+  LC  G + Q+  F D +  K
Sbjct: 400 ILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HK 458

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               +   YS ++  A + R   +A + L  ++ +G  P+ V+Y++L+      G    A
Sbjct: 459 NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAA 518

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
            R  + + + GF P+V  ++ L++    +G  E+  EL+ EM   D
Sbjct: 519 ERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKD 564


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 232/474 (48%), Gaps = 3/474 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+ +A    ERM     +P V     ++  L +     +A KV   M   GI PD  
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T  +   C  G    A++L+  M   G   N V+Y +++ G        ++    D +
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G+ P+  T++ L+    K+  V  + KL   ++ +G  PNL ++N+ + GLC++G  
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA R    + S+G  P+V+SYN L+   C   +  EA   L +M      P   TYN +
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 315 IGSLAYHGKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           I      G   +A K+L D M KG F P   +Y+ +I  LC++G ++  +    +   + 
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKG-FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            K +   YN L   L   G V +A  +++ +     S     Y  V+  LC+ G    A 
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            +L +    G  PD +T+++LI G C +  +++A+EI   M  +   PDV  +N LL GL
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           CK+R+ D  ++ F+ M+EKG  PN  TY IL+E      ++  + E+ KE++ R
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 233/464 (50%), Gaps = 2/464 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A+   + M+ +G  PD++    L++ LCK   ++++ K+   ++  G+ P+  ++   +
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LC+KG +  A +L+E +   G   + ++YN+L+ G C    L ++  +L +++  G+ 
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN FTY+ ++    K   +  A K+L D + KG  P+  +Y+ L+ GLC +G    A+  
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F +   KGF+ +++ YN L++ L  +G   +A +L+ +M     SP I TYN+++  L  
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G    A  +L++ +     P   ++N +I   C +  +D  ++ LD M      P+  T
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN L   LC   K+       +++  K  +     Y  +I S C+  K  +A +L  EM 
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGLCKSRRT 498
             G TPD  T  +LI GLC  G +++A E+FV +E EY +      FN ++   C+    
Sbjct: 559 TRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNV 618

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            ++ ++F  M      P+  TY ++++       ++L+   L E
Sbjct: 619 SMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 228/465 (49%), Gaps = 8/465 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +++A   LE +VS+G  PDV+    L+   CK +K+ +A   +  MV+SG+ P+  
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N  CK G +  A +++      G+  +  TY+SL+ GLC  G++N+++      
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG   +   Y+ L++   K+  V  A++L+ D++  G  P++ +YN+++ GLCK G  
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A     D  +KG  P++ ++N L+   C +   ++A E+L  M     +P ++TYN L
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L    K D+ +     M++    P+  +YN +I   C + KV   ++   +M  R  
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK-QNSSPQEFYKYVITSLCRKGKTYQAF 432
            P+  T   L   LC  G++ +A+ +  ++  + + S     +  +I + C K     A 
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAE 622

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L ++M      PD+YTY  +I   C  G I+ A    +        P       +L  L
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           C + R   ++ +  +M++ G +P E      V  I   D+ E++A
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPEE------VNSIFEADKKEVAA 721



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 154/353 (43%), Gaps = 45/353 (12%)

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS------YNVLLTGLCKEGRTEEAI 258
           TY  ++E    + G+H   + ++D++A+  K N+ S      Y  ++    ++G+ +EA+
Sbjct: 42  TYKCMIE----KLGLHGKFEAMEDVLAEMRK-NVDSKMLEGVYIGIMRDYGRKGKVQEAV 96

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  +     EP+V SYN ++  L   G + +A+++   M      P + T+ I + S 
Sbjct: 97  NVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSF 156

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+   AL++L+ M       +A SY  +I+    E          D+M  +   P+ 
Sbjct: 157 CITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDI 216

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            T+N L                                  I  LC+KG   ++ +L  ++
Sbjct: 217 LTFNKL----------------------------------IHVLCKKGNVQESEKLFSKV 242

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            K G  P+ +T++  I+GLC +G I+EA  +   +      PDV ++N L+ G CK  + 
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             +      M+  G  PNE TY  ++ G      ++ + ++L++   +  + +
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPD 355


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 237/471 (50%), Gaps = 5/471 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA   +  M  KG  P V   T ++  L +A KM+ AI +   M+  G++P+  +Y 
Sbjct: 317 RVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYN 376

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LC +G  G A+++ + ME +G   N  TYN +++GL  + ++ +++   +++++ 
Sbjct: 377 ALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKD 436

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   TY+ L+    K   ++ A + L  +     +P+  +Y  L++G CK G+ + A
Sbjct: 437 GPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSA 496

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             FF ++   G  PN  +Y  ++   C EG+ + A  L   M+    S +I TYN +I  
Sbjct: 497 TSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISG 556

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L+   +   A K   +M +   +P+  +Y  +I  LC     +L  K   +M  + C PN
Sbjct: 557 LSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPN 616

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC  GKV  A    + L         + Y  +++ LCR+G++ +A QL+ 
Sbjct: 617 AHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVE 672

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M + G +P    Y SL+   C    ++ ALEIF +M    ++P +  +  L+  LC   
Sbjct: 673 NMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVS 732

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           R + +L +FQ +++K    +   +T+LV+G+  + + +L  + L  ++ R 
Sbjct: 733 RAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRN 783



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 225/462 (48%), Gaps = 34/462 (7%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           ++ S G KP ++    ++  LCK  K+++A+ V   +    + PDA +YT L+   C+  
Sbjct: 187 QIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNR 246

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A ++ ++M   G   N+VTY++L+ GLC  G + +++  L+ + +KG+ P  +TY+
Sbjct: 247 KLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYT 306

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             + +      V  A+ L+  +  KG  P++ +Y  +++GL + G+ E AI  +  +  +
Sbjct: 307 VPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE 366

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  PN V+YN L+  LC EGR+  A ++   M+G        TYN +I  L      + A
Sbjct: 367 GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKA 426

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           + V ++M+K    P+  +YN +I      G ++   + L  M    C+P+E TY  L   
Sbjct: 427 MVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL--- 483

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
                                          I+  C+ GK   A    YEM K G +P+ 
Sbjct: 484 -------------------------------ISGFCKGGKLDSATSFFYEMLKCGISPNQ 512

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           +TY+++I G C EG I+ AL +F  MEE      ++ +NA++ GL K  R   + +    
Sbjct: 513 WTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAK 572

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           M E+G  PN  TYT L+ G+       L+ ++  E++ +  +
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCL 614



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 233/468 (49%), Gaps = 5/468 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A L   ++      PD    T+L+   C+  K+ KA +V + MV  G  P++ +Y+
Sbjct: 212 KVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYS 271

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LC +G +G AM ++E+M + G      TY   +  LC +G ++ ++  +  + +K
Sbjct: 272 TLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKK 331

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  TY+ ++   ++   +  A+ +   ++ +G  PN V+YN L+  LC EGR   A
Sbjct: 332 GCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIA 391

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F  +   G   N  +YN +++ L      E+A  +  +M     SPT+VTYN LI  
Sbjct: 392 LKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVE 451

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  ++A + L  M +    P   +Y  +I+  C  GK+D       +M      PN
Sbjct: 452 NLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN 511

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           + TY  +    C  GK+  A ++ + +     S+  E Y  +I+ L +  +  +A +   
Sbjct: 512 QWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCA 571

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +MT+ G  P++ TY+SLI GLC       A +IF  ME+ +  P+   + +L+ GLC+  
Sbjct: 572 KMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG 631

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + D +    + + E G  P   TY+ LV G+  +     ++++++ ++
Sbjct: 632 KVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMK 675



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 227/469 (48%), Gaps = 13/469 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ KL+ AF   +RMV  G  P+ V  + L+  LC   ++ +A+ ++E M   GI P   
Sbjct: 244 RNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVY 303

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  ++ LC  G V  A+ LV  M   G   +  TY +++ GL   G +  ++    ++
Sbjct: 304 TYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKM 363

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++GLVPN  TY+ L+     E     A+K+ D +   G   N  +YN ++ GL      
Sbjct: 364 LKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDI 423

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+  F  +   G  P VV+YN L+      G    A   L  M   +  P   TY  L
Sbjct: 424 EKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL 483

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK D A     EM+K    P+  +Y  +I   C EGK+D+ +   ++M    C
Sbjct: 484 ISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543

Query: 375 KPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
             +  TYN  A++ G+ K     EA      +  +Q   P    Y  +I  LC+   T  
Sbjct: 544 SASIETYN--AIISGLSKGNRFSEAEKFCAKM-TEQGLQPNTITYTSLINGLCKNTATNL 600

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF++ +EM K    P+++TY+SLI GLC EG ++ A      + E   +P +D ++ L+ 
Sbjct: 601 AFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVS 656

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           GLC+  R++ + ++ + M EKG  P+   Y  L+  +AH   L++   +
Sbjct: 657 GLCREGRSNEASQLVENMKEKGLSPSMEIYCSLL--VAHCKSLKVDCAL 703



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 178/384 (46%), Gaps = 5/384 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +  A +   +M+  G  P VV    L+ +  K   +  A + + MM  S   PD  +Y  
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++  CK G +  A     +M   G   N  TY +++ G C  G ++ +L   +R+ + G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              +  TY+ ++    K      A K    +  +G +PN ++Y  L+ GLCK   T  A 
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           + F ++  K   PN  +Y  L+  LC EG+ + A  L    +G +  PTI TY+ L+  L
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE--NGCE--PTIDTYSTLVSGL 658

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+++ A ++++ M +    PS   Y  ++   C   KVD  ++  + M  +  +P+ 
Sbjct: 659 CREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHL 718

Query: 379 GTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             Y  L   LCGV + +EA  I QSL  KQ +S    +  ++  L ++G +    + LY 
Sbjct: 719 FIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYL 778

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEG 461
           M     TP  +TY  L R L   G
Sbjct: 779 MESRNCTPSLHTYIILARELSKVG 802



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 174/346 (50%), Gaps = 6/346 (1%)

Query: 188 LQFLDRLIQ-KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP---NLVSYNV 243
           +  L+RL++ K L P       +++A   E  +      L  I +         L S+N 
Sbjct: 108 VSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNT 167

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           LL  L K      A   +  + S G +P+++++N ++  LC +G+ +EA  +  ++   D
Sbjct: 168 LLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFD 227

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P   TY  LI     + K D A +V D MVK    P++ +Y+ +I  LC+EG++   +
Sbjct: 228 LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAM 287

Query: 364 KCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
             L++M  +  +P   TY   ++ LC +G+V +A  +++S+G K  S   + Y  +I+ L
Sbjct: 288 DMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL 347

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
            R GK   A  + ++M K G  P++ TY++LI  LC EG    AL+IF  ME +    + 
Sbjct: 348 FRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANA 407

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY-TILVEGI 527
             +N ++ GL      + ++ VF  M++ G  P   TY T++VE +
Sbjct: 408 QTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENL 453



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 172/377 (45%), Gaps = 36/377 (9%)

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           ++++ LL    K   V +A  +   I + G KP+L+++N ++  LCK+G+ +EA+  F  
Sbjct: 163 YSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNK 222

Query: 264 L------------------------PSKGFE-----------PNVVSYNILLRSLCMEGR 288
           +                          K FE           PN V+Y+ L+  LC EGR
Sbjct: 223 IFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGR 282

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             EA ++L EM      PT+ TY + I SL   G+ D A+ ++  M K    PS  +Y  
Sbjct: 283 IGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTA 342

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQ 407
           II+ L   GK++L +    +M      PN  TYN L   LC  G+   A  I   +    
Sbjct: 343 IISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHG 402

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             +  + Y  +I  L       +A  +  +M K G +P   TY++LI      G +  A 
Sbjct: 403 TLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNAT 462

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
               +M+E + +PD   +  L+ G CK  + D +   F  M++ G  PN+ TYT +++G 
Sbjct: 463 RFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGY 522

Query: 528 AHQDELELSAEVLKELQ 544
             + +++++  + + ++
Sbjct: 523 CKEGKIDVALSLFERME 539



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 158/346 (45%), Gaps = 32/346 (9%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           LN+A   L  M     +PD      L+   CK  K+  A      M+  GI P+  +YT 
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++  CK+G +  A+ L E+ME+ G   +  TYN+++ GL      +++ +F  ++ ++G
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-------------------------- 232
           L PN  TY+ L+    K    + A K+  ++  K                          
Sbjct: 578 LQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAE 637

Query: 233 -----GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
                G +P + +Y+ L++GLC+EGR+ EA +   ++  KG  P++  Y  LL + C   
Sbjct: 638 RLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSL 697

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           + + A E+   M      P +  Y +LI +L    + + AL +   ++K ++      + 
Sbjct: 698 KVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWT 757

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
            ++  L  EG  DL +K L  M  R C P+  TY  LA  L  VGK
Sbjct: 758 VLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 126/237 (53%), Gaps = 4/237 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M  +G +P+ +  T+L+  LCK      A K+   M     +P+A +YT L+  LC++G
Sbjct: 572 KMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG 631

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A    E++ + G      TY++LV GLC  G  N++ Q ++ + +KGL P+   Y 
Sbjct: 632 KVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYC 687

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            LL A  K   V  A+++ + +  KG +P+L  Y VL+  LC   R EEA+  F+ L  K
Sbjct: 688 SLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKK 747

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            +  +++ + +L+  L  EG  +   + L  M+  + +P++ TY IL   L+  GK+
Sbjct: 748 QWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKS 804



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 139/307 (45%), Gaps = 11/307 (3%)

Query: 52  ISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA 111
           ISP    YT          D   ++ K++ A    ERM   G    +     ++  L K 
Sbjct: 508 ISPNQWTYTA-------MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKG 560

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N+  +A K    M   G+ P+  +YT L+N LCK      A ++  +ME      N  TY
Sbjct: 561 NRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTY 620

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
            SL+ GLC  G ++ +    +RL + G  P   TYS L+    +E   + A +L++++  
Sbjct: 621 TSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKE 676

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KG  P++  Y  LL   CK  + + A+  F  +  KGF+P++  Y +L+ +LC   R EE
Sbjct: 677 KGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEE 736

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  +   +     +  ++ + +L+  L   G +D  +K L  M      PS  +Y  +  
Sbjct: 737 ALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILAR 796

Query: 352 RLCSEGK 358
            L   GK
Sbjct: 797 ELSKVGK 803



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 121/250 (48%), Gaps = 1/250 (0%)

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           ++  D G    T+ ++N L+  L        A  V  ++     +PS  ++N +I  LC 
Sbjct: 150 ISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCK 209

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
           +GKV   V   +++F     P+  TY  L +  C   K+ +AF +   +     +     
Sbjct: 210 KGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVT 269

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I  LC +G+  +A  +L EMT+ G  P  YTY+  I  LC  G +++A+ +   M 
Sbjct: 270 YSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMG 329

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +    P V  + A++ GL ++ + +L++ ++  M+++G +PN  TY  L+  +  +    
Sbjct: 330 KKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFG 389

Query: 535 LSAEVLKELQ 544
           ++ ++   ++
Sbjct: 390 IALKIFDWME 399


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 241/474 (50%), Gaps = 8/474 (1%)

Query: 90   VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
            + +G +PD V  T L+  +   N +  A+++ + M   G++ DA +Y  L+N LCK    
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067

Query: 150  GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
            G A++L EKM+      +  TY  ++  LC  G   ++L     +I  G++P+   YS L
Sbjct: 1068 GLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 210  LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
            ++   +   +  A++   ++  +G   ++ +YN L+ GL + G  +E   F   +  +GF
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 270  EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
             P+  ++ IL+  LC EG+  EA ++L  M    + P I+TYN L+  L   G+ + A K
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 330  VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLC 388
            + + +     + +  SYN +I   C + K+D   +  ++M  +  KP+  TYN L   LC
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC 1306

Query: 389  GVGKV---QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
              G+V   Q+ F  +Q+ G     S    Y  ++  LC+ G   +A  L   + K    P
Sbjct: 1307 QSGRVRTAQKLFVEMQTCGQFLKLST---YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKP 1363

Query: 446  DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
            +   +S L+ G+C  G +EEA + F  + +   +PD   +N L+ GLC       ++++ 
Sbjct: 1364 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 1423

Query: 506  QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
              M EKG +P+  T+ ++++ +  ++E+  + ++L+E++ R    + AV  +++
Sbjct: 1424 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 223/451 (49%), Gaps = 14/451 (3%)

Query: 81   DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
            DA    + M  KG   D      L+  LCKA K   AIK+ E M       D  +Y  ++
Sbjct: 1034 DAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMII 1092

Query: 141  NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
            + LCK G    A+ +  +M   G   + V Y+SL+ GLC  G L ++L+F   +  +G+ 
Sbjct: 1093 DALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 1152

Query: 201  PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
             + +TY+ L+    +          L+ ++ +G  P+  ++ +L+ GLCKEG+  EA + 
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212

Query: 261  FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
               +  KG EP++++YN L+  LC+ G+ E+A +L   +        + +YNILI     
Sbjct: 1213 LELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272

Query: 321  HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
              K D A +  +EM     +PS  +YN +I  LC  G+V    K   +M  + C    G 
Sbjct: 1273 DQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM--QTC----GQ 1326

Query: 381  YNGLAM-------LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            +  L+        LC  G ++EA  + QS+   ++    E +  ++  +CR GK  +A++
Sbjct: 1327 FLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 1386

Query: 434  LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
               E++K G  PD+  Y+ LI GLC +G++ EA+++   MEE    PD   FN ++  L 
Sbjct: 1387 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 1446

Query: 494  KSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            K      ++++ + M  +   P+E   ++L+
Sbjct: 1447 KENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 231/468 (49%), Gaps = 4/468 (0%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            KLNDA    +R +     P      +LL  + K         +   +   GI PD  +  
Sbjct: 926  KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++C C    VG    +       G+  + VT  +LV+G+ M   +  ++Q  D + +K
Sbjct: 986  ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEE 256
            GL+ +A TY  L+    K R    A+KL + +  KG  K ++ +Y +++  LCK+G T E
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMIIDALCKDGMTTE 1103

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            A+  F ++   G  P+VV Y+ L+  LC  GR +EA E   EM+G   S  + TYN LI 
Sbjct: 1104 ALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIH 1163

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             L+  G        L+ MV   F P A ++  +I  LC EGKV    + L+ M H+  +P
Sbjct: 1164 GLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEP 1223

Query: 377  NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            +  TYN L   LC VG++++A  + +SL ++        Y  +I   C+  K  +AF+  
Sbjct: 1224 DILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFF 1283

Query: 436  YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             EM   G  P + TY++LI  LC  G +  A ++FV M+       +  +  LL GLCK+
Sbjct: 1284 EEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN 1343

Query: 496  RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
               + ++++FQ + +    PN   ++IL++G+    +LE + +   E+
Sbjct: 1344 GHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 1391



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 188/380 (49%), Gaps = 34/380 (8%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R  +L +A    + M  +G   DV    +L++ L +A   K+    + +MV  G  PDA 
Sbjct: 1132 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 1191

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++T L++ LCK+G VG A Q++E M   G   + +TYN+L+ GLC++G L  + +  + L
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              +G+  N F+Y+ L+    K++ +  A +  +++  KG KP+ V+YN L+  LC+ GR 
Sbjct: 1252 ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRV 1311

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
              A + F ++ + G    + +Y +LL  LC  G  EEA +L   +   +  P I  ++IL
Sbjct: 1312 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSIL 1371

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
            +  +   GK + A K  DE+ K    P   +YN +I  LC++G +   VK L QM  + C
Sbjct: 1372 LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGC 1431

Query: 375  KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             P+  T+N                                   +I +L ++ + ++A QL
Sbjct: 1432 LPDSITFN----------------------------------VIIQNLLKENEIHEAIQL 1457

Query: 435  LYEMTKYGFTPDSYTYSSLI 454
            L EM    F+PD    S L+
Sbjct: 1458 LEEMRNRNFSPDEAVTSMLL 1477



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 114/218 (52%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            +D K+++AF   E M  KG KP  V    L+  LC++ +++ A K+   M + G     S
Sbjct: 1272 KDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 1331

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +Y  L++ LCK G++  AM L + ++   +  N   ++ L+ G+C  G L ++ +  D +
Sbjct: 1332 TYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 1391

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + GL P+   Y+ L+     +  +  A+KLL  +  KG  P+ +++NV++  L KE   
Sbjct: 1392 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI 1451

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
             EAI+   ++ ++ F P+    ++LL     + +W  A
Sbjct: 1452 HEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAA 1489



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 81/140 (57%)

Query: 94   HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
            HKP++   + LL  +C+A K+++A K  + +  +G+ PD  +Y  L+N LC KG +  A+
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 1420

Query: 154  QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            +L+ +ME+ G   +++T+N +++ L     +++++Q L+ +  +   P+    S LL  A
Sbjct: 1421 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLA 1480

Query: 214  YKERGVHAAMKLLDDIIAKG 233
              +   HAA+  L + + KG
Sbjct: 1481 SFDPQWHAALVSLPNALQKG 1500


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 219/418 (52%), Gaps = 7/418 (1%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +++  ++  LC  G    A++L+ +M       N VTYN+++ G C  G +  +L  +  
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 539

Query: 194 LIQKG-LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKE 251
           + ++G + PN +TY  ++    K   V  A+K+ D+++ KG  KP  V YN L+ G C +
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ + A+ +   +  +G    V +YN+L+ +L M+GR  EA EL+ EM G   +P + TY
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI      G    AL++ + M +   R +  +Y  +I  L  +G+V    K  D+   
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719

Query: 372 RRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R  +P+   YN L       G +  AF I+  +  K+ +     Y  ++  LC  G+  +
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L+ EMT+ G  PD  TY++LI G  M+G +++AL I   M    + P +  +NAL+ 
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           GLCK+ + D +  + + M+E G  P+++TY  L+EG+  +DE  +  E L      +V
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERLAAADAAKV 897



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 196/392 (50%), Gaps = 7/392 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDY 162
           +L  LC A K  +A++++  M      P+A +Y  ++   C +G V  A+ ++ +M E  
Sbjct: 489 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 544

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHA 221
           G   N  TY +++ G C +G ++++++  D ++ KG V P A  Y+ L+     +  +  
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+   D ++ +G    + +YN+L+  L  +GR  EA     ++  KG  P+V +YNIL+ 
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 664

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C EG  ++A E+   M       T+VTY  LI +L+  G+     K+ DE V+   RP
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
               YN +I    + G +D   + + +M  +R  P++ TYN L   LC +G+V EA  +I
Sbjct: 725 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +  +        Y  +I+    KG    A ++  EM   GF P   TY++LI+GLC  
Sbjct: 785 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 844

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           G  ++A  +   M E    PD   + +L+ GL
Sbjct: 845 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 1/308 (0%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++A    + M++KG  KP+ V    L+   C   K+  A+   + MV  G+    ++Y
Sbjct: 565 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 624

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             LV+ L   G    A +LVE+M   G   +  TYN L+ G C  GN+ ++L+  + + +
Sbjct: 625 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+     TY+ L+ A  K+  V    KL D+ + +G +P+LV YN L+      G  + 
Sbjct: 685 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 744

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++  K   P+ V+YN L+R LC+ GR +EA +L+ EM      P +VTYN LI 
Sbjct: 745 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 804

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             +  G    AL++ +EM+   F P+  +YN +I  LC  G+ D     + +M      P
Sbjct: 805 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 864

Query: 377 NEGTYNGL 384
           ++ TY  L
Sbjct: 865 DDSTYISL 872



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 150/279 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A L  +RMV +G    V     L++ L    +  +A +++E M   G+ PD  +Y 
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK+GNV  A+++ E M   G     VTY +L+  L   G + ++ +  D  +++
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   Y+ L+ +      +  A +++ ++  K   P+ V+YN L+ GLC  GR +EA
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +   ++  +G +P++V+YN L+    M+G  ++A  +  EM     +PT++TYN LI  
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 840

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           L  +G+ D A  ++ EMV+    P  ++Y  +I  L +E
Sbjct: 841 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 131/243 (53%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D +  +A+  +E M  KG  PDV     L+   CK   +KKA+++ E M   G+     +
Sbjct: 634 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 693

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L+  L KKG V    +L ++    G   + V YN+L+      GN++++ + +  + 
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 753

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K + P+  TY+ L+        V  A KL+D++  +G +P+LV+YN L++G   +G  +
Sbjct: 754 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+R   ++ +KGF P +++YN L++ LC  G+ ++A  ++ EM     +P   TY  LI
Sbjct: 814 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873

Query: 316 GSL 318
             L
Sbjct: 874 EGL 876



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 119/217 (54%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E M  +G +  VV  T L+Y L K  ++++  K+ +  V  GI PD   Y  L+N    
Sbjct: 679 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 738

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A +++ +ME      + VTYN+L+RGLC+LG ++++ + +D + ++G+ P+  T
Sbjct: 739 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 798

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+     +  V  A+++ ++++ KG  P L++YN L+ GLCK G+ ++A    +++ 
Sbjct: 799 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 858

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
             G  P+  +Y  L+  L  E      +E LA  D  
Sbjct: 859 ENGITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 895



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF L  +M +      + T++ ++R LC  G    ALE+   M     +P+   +N ++ 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 522

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           G C   R   +L++ + M E+G + PN+ TY  ++ G      ++ + +V  E+  +  V
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 550 SESAV 554
              AV
Sbjct: 583 KPEAV 587


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 223/449 (49%), Gaps = 10/449 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII---PDASSYTYLVNC 142
           L+RM   G  PD V    LL  LC   + ++A++++ MM    +    P+  SY+ ++N 
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
              +G V     L  +M D G P + VTY +++ GLC     +++     ++I  G+ PN
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPN 272

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+            +++L+++ A G KPN  +Y  LL  LCK GR  EA  FF 
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFD 332

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  KG +P+V +Y I+L     +G   E ++LL  M     SP    +NI   + A  G
Sbjct: 333 SMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCG 392

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             D A+ + ++M +    P A SY  +I  LC  G+VD      +QM +    P+   ++
Sbjct: 393 IIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFS 452

Query: 383 GLAM-LCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            L   LC V    KV+E F  + ++G   N     F+  ++ +LC++G+  +  +L+  +
Sbjct: 453 SLVYGLCTVDKWEKVEELFFEMLNVGIHPNIV---FFNTILCNLCKEGRVMEGQRLVDSI 509

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  PD  +Y++LI G C+ G I+EA ++   M     KPD  ++N LL G CK+ R 
Sbjct: 510 ECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRI 569

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           D +   F+ M+  G  P   TY  ++ G+
Sbjct: 570 DSAYSHFRKMLSNGITPGVVTYNTILHGL 598



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 239/487 (49%), Gaps = 16/487 (3%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G  PDVV  T ++  LCKA    +A  V + M+ +G+ P+  +Y  L++     G 
Sbjct: 229 MMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK 288

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
               ++++E+M   G   N  TY SL+  LC  G   ++  F D +I KG+ P+  TY  
Sbjct: 289 WKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGI 348

Query: 209 LLEAAYKERGVHAAMK-LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           +L   Y  +G  + M  LL+ ++A G  PN   +N+  +   K G  ++A+  F  +  +
Sbjct: 349 MLHG-YATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQ 407

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+ VSY  L+ +LC  GR ++A     +M     +P IV ++ L+  L    K +  
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
            ++  EM+     P+   +N I+  LC EG+V    + +D +     +P+  +YN L   
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527

Query: 387 LCGVGKVQEAFAIIQ---SLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            C  G + EA  +++   S+G K    P  F Y  ++   C+ G+   A+    +M   G
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLK----PDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG 583

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            TP   TY++++ GL       EA E+++ M     K D+  +N +L GLCKS   D ++
Sbjct: 584 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI 643

Query: 503 EVFQMMIEKGQMPNETTYTI----LVEGIAHQDELELSAEVLKELQLRQVVS-ESAVERL 557
           ++FQ +  KG   N  T+ I    L++G   +D ++L A +     ++ VV+    VE L
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703

Query: 558 VMQYDFE 564
           + +   E
Sbjct: 704 IEEGSLE 710



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 267/540 (49%), Gaps = 65/540 (12%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA ++  +M+++G  PD+V  ++L+Y LC  +K +K  ++   M++ GI P+   + 
Sbjct: 428 RVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFN 487

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK+G V    +LV+ +E  G   + ++YN+L+ G C+ G ++++ + L+ ++  
Sbjct: 488 TILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV 547

Query: 198 GLVPNAF-----------------------------------TYSFLLEAAYKERGVHAA 222
           GL P++F                                   TY+ +L   ++ +    A
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            +L  ++I  G K ++ +YN++L GLCK    +EAI+ F++L SKG + N++++NI++ +
Sbjct: 608 KELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           L   GR E+A +L A +        +VTY +++ +L   G  +    +   M K    P+
Sbjct: 668 LLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPN 727

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
           +   N ++ RL   G +      L ++  R       T    +ML  +    E     +S
Sbjct: 728 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST---TSMLISIFSSDEYQHHAKS 784

Query: 403 LG------NKQNSSPQEFYKYVITSLCRKGKTY-QAFQLLYEMTKYGFTPDSYTYSSLIR 455
           L       N+ NSS          +L +K +    A+ L  EM   G TPD  TY++++ 
Sbjct: 785 LPKKYRILNEANSS----------ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 834

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GL   G   EA E+++ M     + ++  +N +L GLCKS   D + ++FQ +  KG   
Sbjct: 835 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 894

Query: 516 NETTYTI----LVEGIAHQDELELSAEV-----LKELQLRQVVSESAVERLVMQYDFEGI 566
           N  T+ I    L++G   +D ++L A +     + ++   ++V+E+ +E   ++ +F+G+
Sbjct: 895 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLE-EFDGL 953



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 210/457 (45%), Gaps = 34/457 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  +    LE M + G KP+     +LL  LCK  + ++A    + M+  GI P  ++Y 
Sbjct: 288 KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYG 347

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++    KG +     L+  M   G   N   +N         G +++++   +++ Q+
Sbjct: 348 IMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQ 407

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+A +Y  L++A  K   V  A    + +I +G  P++V ++ L+ GLC   + E+ 
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F ++ + G  PN+V +N +L +LC EGR  E   L+  ++     P +++YN LI  
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  D A K+L+ MV    +P + SYN ++   C  G++D       +M      P 
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPG 587

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN   +L G+ +             K+ S  +E Y  +I S                
Sbjct: 588 VVTYN--TILHGLFQT------------KRFSEAKELYLNMINS---------------- 617

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
               G   D YTY+ ++ GLC    ++EA+++F  +     + ++  FN ++  L K  R
Sbjct: 618 ----GTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            + ++++F  +   G + N  TY ++VE +  +  LE
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLE 710



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 211/499 (42%), Gaps = 52/499 (10%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS----------SG 128
           L DA    + ++       VV   +LL  + +++  +      E +VS            
Sbjct: 30  LGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIK 89

Query: 129 IIPDASSYTYLVNCLCKKGN-----------------------------------VGYAM 153
           + P+  +Y+ L+ C C+ G+                                   VG AM
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 154 Q-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV---PNAFTYSFL 209
             L+++M + G   +TV+YN L++GLC      ++L+ L  +    +    PN  +YS +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           +   + E  V     L  +++ +G  P++V+Y  ++ GLCK    + A   F+ +   G 
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           +PN+ +YN L+      G+W+E   +L EM  G   P   TY  L+  L  +G+   A  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLC 388
             D M+    +PS  +Y  ++    ++G +  +   L+ M      PN   +N   +   
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
             G + +A  I   +  +Q  SP    Y  +I +LC+ G+   A     +M   G TPD 
Sbjct: 390 KCGIIDKAMDIFNKM-RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             +SSL+ GLC     E+  E+F  M      P++  FN +L  LCK  R      +   
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDS 508

Query: 508 MIEKGQMPNETTYTILVEG 526
           +   G  P+  +Y  L++G
Sbjct: 509 IECMGVRPDVISYNTLIDG 527



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 207/468 (44%), Gaps = 4/468 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +  +A    + M+ KG KP V     +L+       + +   ++ +MV++GI P+  
Sbjct: 320 KNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHH 379

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +    +   K G +  AM +  KM   G   + V+Y +L+  LC LG ++ +    +++
Sbjct: 380 IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQM 439

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +G+ P+   +S L+             +L  +++  G  PN+V +N +L  LCKEGR 
Sbjct: 440 INEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRV 499

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            E  R    +   G  P+V+SYN L+   C+ G  +EA++LL  M      P   +YN L
Sbjct: 500 MEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTL 559

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G+ D A     +M+     P   +YN I+  L    +     +    M +   
Sbjct: 560 LHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 619

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           K +  TYN  L  LC    V EA  + Q+L +K        +  +I +L + G+   A  
Sbjct: 620 KWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMD 679

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   +   G   +  TY  ++  L  EG +EE   +F  ME+    P+    NAL+  L 
Sbjct: 680 LFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 739

Query: 494 KSRRTDLSLE-VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
              R D+S    +   +++     E + T ++  I   DE +  A+ L
Sbjct: 740 --HRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 785



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 1/219 (0%)

Query: 152  AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
            A  L  +M   G   + VTYN+++ GL   G  +++ +    +I      N +TY+ +L 
Sbjct: 810  AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILN 869

Query: 212  AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
               K   V  A K+   + +KG + N++++N+++  L K GR E+A+  F  +P+ G  P
Sbjct: 870  GLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVP 929

Query: 272  NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
            +VV+Y ++  +L  EG  EE + L   M+           N L+  L   G    A   L
Sbjct: 930  DVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYL 989

Query: 332  DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
             ++ +  F   A++ + +I+ L S G+     K L + +
Sbjct: 990  SKLDEKNFSLEASTTSELIS-LFSRGEYQHHAKSLPEKY 1027



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 1/224 (0%)

Query: 110  KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
            KA ++  A  +   M+  G+ PD  +Y  +++ L + G    A +L   M +     N  
Sbjct: 803  KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 862

Query: 170  TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            TYN ++ GLC    ++++ +    L  KGL  N  T++ ++ A  K      AM L   I
Sbjct: 863  TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 922

Query: 230  IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
             A G  P++V+Y ++   L +EG  EE    F  +   G   +    N L+R L   G  
Sbjct: 923  PANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDI 982

Query: 290  EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
              A   L+++D  + S    T + LI SL   G+  H  K L E
Sbjct: 983  SRAGAYLSKLDEKNFSLEASTTSELI-SLFSRGEYQHHAKSLPE 1025



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+  TYS LI   C  G +E     F ++ +  ++ D    N LL GLC  +R   +++
Sbjct: 91  APNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMD 150

Query: 504 VF-QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           V  Q M E G MP+  +Y IL++G+ ++   E + E+L  +   QV S
Sbjct: 151 VLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWS 198


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 246/514 (47%), Gaps = 52/514 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A     ++   G  P +V  + LL+ LC  +++ +A+     +      P+  ++T
Sbjct: 126 KLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFT 181

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LC++G V  A+ L+++M + G   N +TY ++V G+C +G+   +L  L ++ + 
Sbjct: 182 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 241

Query: 198 GLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             + PN   YS +++  +K+     A  L  ++  KG  PNL +YN ++ G C  GR  E
Sbjct: 242 SRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSE 301

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----------------- 299
           A R  R++  +   P+VV++++L+ +L  EG++ EA EL  EM                 
Sbjct: 302 AQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMID 361

Query: 300 --------DGGDR----------SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
                   D  +R          SP ++T++ILI       + D  +K+L EM +     
Sbjct: 362 GFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVA 421

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA---F 397
           +  +Y  +I   C  G ++  +  L +M      PN  T N L   LC  GK+++A   F
Sbjct: 422 NTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF 481

Query: 398 AIIQ-SLGNKQNSSP-------QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            ++Q S  +   S P        + Y  +I  L  +GK  +A +L  EM   G  PD+ T
Sbjct: 482 KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTIT 541

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y+S+I GLC +  ++EA ++F  M    + PDV  F  L+ G CK  R    LEVF  M 
Sbjct: 542 YNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMG 601

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +G + N  TY  L+ G      +  + ++ +E+
Sbjct: 602 RRGIVANAITYRTLIHGFCQVGNINGALDIFQEM 635



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 239/514 (46%), Gaps = 44/514 (8%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L+DA      MV     P V+    LL  + +  +    I +   M    I  + 
Sbjct: 52  HEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNI 111

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF--- 190
            S+T L+ C C    + +A+    K+   G+  + VT+++L+ GLC+   ++++L F   
Sbjct: 112 YSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ 171

Query: 191 ----------------------------LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                                       LDR+++ GL PN  TY  +++   K     +A
Sbjct: 172 ICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 231

Query: 223 MKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           + LL  +      KPN+V Y+ ++ GL K+GR  +A   F ++  KG  PN+ +YN ++ 
Sbjct: 232 LNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  GRW EA  LL EM     SP +VT+++LI +L   GK   A ++ +EM+     P
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
           +  +YN +I     + ++D   +    M  + C P+  T++ L    CG  +V +   ++
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLL 411

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +  +   +    Y  +I   C+ G    A  LL EM   G  P+  T ++L+ GLC  
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN 471

Query: 461 GLIEEALEIFVVMEEY-----------DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           G +++ALE+F VM++            D +PDV  +N L+ GL    +   + E+++ M 
Sbjct: 472 GKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMP 531

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +G +P+  TY  +++G+  Q  L+ + ++   +
Sbjct: 532 HRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSM 565



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 237/481 (49%), Gaps = 17/481 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RMV  G +P+ +    ++  +CK      A+ ++  M   S I P+ 
Sbjct: 189 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNV 248

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ L K G    A  L  +M++ G   N  TYN ++ G C  G  +++ + L  
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + ++ + P+  T+S L+ A  KE     A +L ++++ +G  PN ++YN ++ G  K+ R
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A R F  + +KG  P+V++++IL+   C   R ++  +LL EM         +TY  
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +L EM+     P+  + N ++  LC+ GK+   ++    M   +
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488

Query: 374 -----------CKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                       +P+  TYN   ++CG+   GK  EA  + + + ++        Y  VI
Sbjct: 489 MDLDASHPFNDVEPDVQTYN--ILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVI 546

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC++ +  +A Q+   M   GF+PD  T+++LI G C  G + + LE+F  M      
Sbjct: 547 DGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIV 606

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
            +   +  L+ G C+    + +L++FQ MI  G  P+  T   ++ G+  ++EL+ + + 
Sbjct: 607 ANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQC 666

Query: 540 L 540
           L
Sbjct: 667 L 667



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 164/364 (45%), Gaps = 40/364 (10%)

Query: 191 LDRLIQKGLVP-NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           L R ++   +P N ++++ L++       +  A+     I   G  P+LV+++ LL GLC
Sbjct: 98  LHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC 157

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
            E R  EA+ FF  +     +PNV+++  L+  LC EGR  EA  LL  M      P  +
Sbjct: 158 VEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 213

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           TY  ++  +   G T  AL +L +M +  R +P+   Y+ II  L  +G+         +
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           M  +   PN  TYN +                                  I   C  G+ 
Sbjct: 274 MQEKGISPNLFTYNCM----------------------------------INGFCSSGRW 299

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A +LL EM +   +PD  T+S LI  L  EG   EA E++  M      P+   +N++
Sbjct: 300 SEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSM 359

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + G  K  R D +  +F +M  KG  P+  T++IL++G      ++   ++L E+  R +
Sbjct: 360 IDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGL 419

Query: 549 VSES 552
           V+ +
Sbjct: 420 VANT 423


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 236/475 (49%), Gaps = 6/475 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SKG  P V     ++  LC  N++  A  +++ M   G +P+A  Y  L++ L K G 
Sbjct: 208 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGR 267

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V   ++L+E+M   G   +  T+N  + GLC +  ++++ + +DR++ +G  PN+FTY  
Sbjct: 268 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 327

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD-LPSK 267
           L+    +   V  A  LL+ +      PN+V +N L+ G    GR +EA     + + S 
Sbjct: 328 LMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 383

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P++ +YN L+  LC +G    A EL+ EM      P ++TY ILI      G+ + A
Sbjct: 384 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 443

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
             VLDEM       +A  YN +I+ LC + KV   +     M  + CKP+  T+N L   
Sbjct: 444 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 503

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC V K +EA  + Q +  +   +    Y  +I +  R+G   +A +L+ +M   G   D
Sbjct: 504 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 563

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ LI+ LC  G IE+ L +F  M      P+  + N L+ GLC++     +LE  +
Sbjct: 564 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 623

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            MI +G  P+  TY  L+ G+      + +  +  +LQ+  +  ++     ++ +
Sbjct: 624 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 678



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 236/460 (51%), Gaps = 6/460 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++N+    LE M+  G  PDV    + ++ LCK  ++ +A K+++ M+  G  P++ +Y 
Sbjct: 267 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 326

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL-DRLIQ 196
            L++ LC+ G V  A  L+ K+ +     N V +N+L+ G    G L+++   + + ++ 
Sbjct: 327 VLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 382

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G  P+ FTY+ L+    K+  + +A +L++++  KG +PN+++Y +L+   CKEGR EE
Sbjct: 383 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 442

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++  KG   N V YN L+ +LC + + ++A  +  +M      P I T+N LI 
Sbjct: 443 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 502

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L    K + AL +  +M+      +  +YN +I      G +   +K ++ M  R C  
Sbjct: 503 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 562

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           ++ TYNGL   LC  G +++  A+ + + +K  +        +I  LCR G    A + L
Sbjct: 563 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 622

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +M   G TPD  TY+SLI GLC  G  +EAL +F  ++     PD   +N L+   CK 
Sbjct: 623 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 682

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              D +  +    ++ G +PNE T+ ILV     + + E 
Sbjct: 683 GMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQEF 722



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 141/248 (56%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+ DA      M SKG KPD+    +L++ LCK NK ++A+ + + M+  G+I +  
Sbjct: 471 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 530

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++   ++G +  A++LV  M   G P + +TYN L++ LC  GN+ + L   + +
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KGL PN  + + L+    +   +  A++ L D+I +G  P++V+YN L+ GLCK GR 
Sbjct: 591 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 650

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+  F  L  +G  P+ ++YN L+   C EG +++A+ LL+        P  VT+ IL
Sbjct: 651 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 710

Query: 315 IGSLAYHG 322
           + +    G
Sbjct: 711 VSNFIKEG 718



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 147/287 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ +L +A   L+ M  KG   + V    L+  LCK  K++ A+ +   M S G  
Sbjct: 432 DRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCK 491

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  L+  LCK      A+ L + M   G   NT+TYN+L+      G + ++L+ 
Sbjct: 492 PDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 551

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++ ++ +G   +  TY+ L++A  +   +   + L +D+++KG  PN +S N+L+ GLC+
Sbjct: 552 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 611

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  + A+ F RD+  +G  P++V+YN L+  LC  GR +EA  L  ++      P  +T
Sbjct: 612 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 671

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           YN LI      G  D A  +L   V   F P+  ++  +++    EG
Sbjct: 672 YNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 186/455 (40%), Gaps = 73/455 (16%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV--H 220
           GY      Y  L+  L   G        L ++ Q+G+V     +  L+   Y   G+   
Sbjct: 106 GYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLF-ILIMKHYGRAGLPGQ 164

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A   LLD       +P   SYNV+L  L      +     F ++ SKG  P V ++ +++
Sbjct: 165 ATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVM 224

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           ++LC+    + A  LL +M      P  + Y  LI +L   G+ +  LK+L+EM+     
Sbjct: 225 KALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCI 284

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM--LCGVGKVQEAFA 398
           P   ++N  I  LC   ++    K +D+M  R   PN  TY G+ M  LC +GKV EA  
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTY-GVLMHGLCRMGKVDEARM 343

Query: 399 IIQSLGNKQ-------------------------------NSSPQEF-YKYVITSLCRKG 426
           ++  + N                                    P  F Y  +I  LC+KG
Sbjct: 344 LLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 403

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE--------------------- 465
               A +L+ EM   G  P+  TY+ LI   C EG +EE                     
Sbjct: 404 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 463

Query: 466 --------------ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
                         AL +F  M     KPD+  FN+L+ GLCK  + + +L ++Q M+ +
Sbjct: 464 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 523

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           G + N  TY  L+     +  ++ + +++ ++  R
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 558



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 35/152 (23%)

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-------YK------ 479
            + YEM   G +P  YT+  +++ LC+   ++ A  +   M  +        Y+      
Sbjct: 203 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 262

Query: 480 ----------------------PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
                                 PDV+ FN  + GLCK  R   + ++   M+ +G  PN 
Sbjct: 263 XKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNS 322

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            TY +L+ G+    +++ +  +L ++    VV
Sbjct: 323 FTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV 354


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 232/463 (50%), Gaps = 2/463 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G+K        LL    +  K ++A  + +        PD+ +Y+ L+N  CK  +   A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            +L+++ME  G   +   YN++++GLC  G ++ +L    R +Q+   P+  TY+ L++A
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY-RDMQRNCAPSVITYTILVDA 245

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K   +  A  +L+D+I  G  PN+V+YN L+ G CK G  +EA+  F  +      P+
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V +YNIL+   C + R ++  +LL EM      P  +TYN L+ SL   GK   A  +  
Sbjct: 306 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 365

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVG 391
            M++   +PS  ++N +I   C  G++DL  +    M  R C P+  TYN  ++  C   
Sbjct: 366 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 425

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           ++ +A  +++ +           Y  +++ LC+  +  +A+++   +   G+  D  T S
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LI GLC    +++A ++   ME     PDV  +  L+ G CK+ + D SL  F  M++K
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 545

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           G +P   TY+I+++ +     +     +LK +  R V  ++ V
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIV 588



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 231/473 (48%), Gaps = 1/473 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +++DA L LE M+  G  P+VV    L+   CK   M +A+ +   M+ +   
Sbjct: 244 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 303

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L++  CK+       +L+++M  YG   N +TYN+L+  L   G    +   
Sbjct: 304 PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL 363

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++++   P+ FT++ +++   K   +  A +L   +  +G  P++ +YN++++G C+
Sbjct: 364 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACR 423

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R ++A +    +   G  P+VV+YN ++  LC   + +EA E+   +  G     +VT
Sbjct: 424 ANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVT 483

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
            + LI  L    + D A K+L EM +    P   +Y  +I   C   ++D  +    +M 
Sbjct: 484 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 543

Query: 371 HRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            + C P   TY+  +  LC   +V++   +++++  +  +     Y  VI  LC+     
Sbjct: 544 DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYD 603

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A++L   M + G  P   TY+ L+  LC    ++EA+ +  VME     PD   +N++ 
Sbjct: 604 EAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVF 663

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            G  KS   D +  +FQ M  +G  P    Y++L+  +  +++++ + E+ +E
Sbjct: 664 DGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEE 716



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/521 (24%), Positives = 231/521 (44%), Gaps = 70/521 (13%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS--------------------- 134
           PD +  + L+   CKA   ++A ++++ M   GI+P  +                     
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224

Query: 135 -------------SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
                        +YT LV+ LCK   +  A  ++E M + G   N VTYN+L+ G C L
Sbjct: 225 YRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 284

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           GN+++++   +++++    P+ FTY+ L++   K+       KLL +++  G +PN ++Y
Sbjct: 285 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 344

Query: 242 NVLLTGL-----------------------------------CKEGRTEEAIRFFRDLPS 266
           N L+  L                                   CK G+ + A   F+ +  
Sbjct: 345 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD 404

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  P++ +YNI++   C   R ++A +LL  M      P +VTYN ++  L    + D 
Sbjct: 405 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDE 464

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A +V + +  G +     + + +I  LC   ++D   K L +M      P+   Y  L  
Sbjct: 465 AYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIH 524

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C   ++ ++ A    + +K        Y  VI  LC+  +      LL  M + G TP
Sbjct: 525 GFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTP 584

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D+  Y+S+I GLC     +EA E++ +M++    P V  +N L+  LCK  R D ++ + 
Sbjct: 585 DAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLL 644

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           ++M   G +P+  TY  + +G     E + +  + + ++ R
Sbjct: 645 EVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 189/380 (49%), Gaps = 7/380 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL-CKANKMKKAIKVMEMMVSSGI 129
           D+  +  K  DAF   + M+ +  KP      NL+ D+ CK  ++  A ++ ++M   G 
Sbjct: 349 DSLVKSGKYIDAFNLAQMMLRRDCKPSHF-TFNLMIDMFCKVGQLDLAYELFQLMTDRGC 407

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +PD  +Y  +++  C+   +  A QL+E+M + G P + VTYNS+V GLC    ++++ +
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             + L   G   +  T S L++   K R +  A KLL ++   G  P++V+Y +L+ G C
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K  + ++++ FF ++  KG  P V++Y+I++  LC   R  +   LL  M     +P  +
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            Y  +I  L      D A ++   M +    P+  +YN ++ +LC   ++D  +  L+ M
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVM 647

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
               C P+  TYN  ++  G  K  E   AF + Q++ ++  S     Y  ++T L  + 
Sbjct: 648 ESDGCLPDTVTYN--SVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEE 705

Query: 427 KTYQAFQLLYEMTKYGFTPD 446
           K  QA ++  E  + G   D
Sbjct: 706 KMDQAMEIWEEALEAGADVD 725



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 195/407 (47%), Gaps = 40/407 (9%)

Query: 176 RGLCMLGNLNQSLQFLDRLI-QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           R L  L +L+++++F D    Q G   + FT + LL A  +++    A  L  +      
Sbjct: 104 RVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLC 163

Query: 235 KPNLVSYNVLLTGLCK-----------------------------------EGRTEEAIR 259
            P+ ++Y+ L+ G CK                                    GR + A+ 
Sbjct: 164 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 223

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            +RD+  +   P+V++Y IL+ +LC   R  +A+ +L +M     +P +VTYN LI    
Sbjct: 224 HYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G  D A+ + ++M++    P   +YN +I   C + +     K L +M    C+PN  
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           TYN L   L   GK  +AF + Q +  +++  P  F +  +I   C+ G+   A++L   
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMM-LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           MT  G  PD YTY+ +I G C    I++A ++   M E    PDV  +N+++ GLCK+ +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            D + EV++++   G   +  T + L++G+     L+ + ++L+E++
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 508


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 240/474 (50%), Gaps = 8/474 (1%)

Query: 90  VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           + +G +PD V  T L+  +   N +  A+++ + M   G+  DA +Y  L+N LCK    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
           G A++L EKM+      +  TY  ++  LC  G   ++L     +I  G++P+   YS L
Sbjct: 129 GLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           ++   +   +  A++   ++  +G   ++ +YN L+ GL + G  +E   F   +  +GF
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            P+  ++ IL+  LC EG+  EA ++L  M    + P I+TYN L+  L   G+ + A K
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLC 388
           + + +     + +  SYN +I   C + K+D   +  ++M  +  KP+  TYN L   LC
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 389 GVGKV---QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             G+V   Q+ F  +Q+ G     S    Y  ++  LC+ G   +A  L   + K    P
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLST---YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKP 424

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +   +S L+ G+C  G +EEA + F  + +   +PD   +N L+ GLC       ++++ 
Sbjct: 425 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
             M EKG +P+  T+ ++++ +  ++E+  + ++L+E++ R    + AV  +++
Sbjct: 485 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 227/456 (49%), Gaps = 14/456 (3%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           ++ + DA    + M  KG   D      L+  LCKA K   AIK+ E M       D  +
Sbjct: 90  ENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFT 148

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +++ LCK G    A+ +  +M   G   + V Y+SL+ GLC  G L ++L+F   + 
Sbjct: 149 YGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 208

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            +G+  + +TY+ L+    +          L+ ++ +G  P+  ++ +L+ GLCKEG+  
Sbjct: 209 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 268

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA +    +  KG EP++++YN L+  LC+ G+ E+A +L   +        + +YNILI
Sbjct: 269 EAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 328

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                  K D A ++ +EM     +PS  +YN +I  LC  G+V    K   +M  + C 
Sbjct: 329 NGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM--QTC- 385

Query: 376 PNEGTYNGLAM-------LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
              G +  L+        LC  G ++EA  + QS+   ++    E +  ++  +CR GK 
Sbjct: 386 ---GQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKL 442

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A++   E++K G  PD+  Y+ LI GLC +G++ EA+++   MEE    PD   FN +
Sbjct: 443 EEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 502

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +  L K      ++++ + M  +   P+E   ++L+
Sbjct: 503 IQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 221/435 (50%), Gaps = 39/435 (8%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+  + VT  +LV+G+ M   +  ++Q  D + +KGL  +A TY  L+    K R    A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 223 MKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           +KL + +  KG  K ++ +Y +++  LCK+G T EA+  F ++   G  P+VV Y+ L+ 
Sbjct: 132 IKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC  GR +EA E   EM+G   S  + TYN LI  L+  G        L+ MV   F P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
            A ++  +I  LC EGKV    + L+ M H+  +P+  TYN L   LC VG++++A  + 
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI------ 454
           +SL ++        Y  +I   C+  K  +AF+L  EM   G  P + TY++LI      
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369

Query: 455 -----------------------------RGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
                                         GLC  G +EEA+++F  +++ ++KP+++ F
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF 429

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           + LL G+C++ + + + + F  + + G  P+   Y IL+ G+ ++  L  + ++L +++ 
Sbjct: 430 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 489

Query: 546 RQVVSESAVERLVMQ 560
           +  + +S    +++Q
Sbjct: 490 KGCLPDSITFNVIIQ 504



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 192/385 (49%), Gaps = 1/385 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D    +A      M+  G  PDVV  ++L+  LC+  ++K+A++  + M   GI 
Sbjct: 154 DSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L++ L + G        +  M D G+  +  T+  L+ GLC  G + ++ Q 
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ +  KG  P+  TY+ L+        +  A KL + +  +G K N+ SYN+L+ G CK
Sbjct: 274 LELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           + + +EA R F ++  KG +P+ V+YN L+ +LC  GR   A +L  EM    +   + T
Sbjct: 334 DQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 393

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y +L+  L  +G  + A+ +   + K   +P+   ++ ++  +C  GK++   K  D++ 
Sbjct: 394 YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 453

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
               +P+   YN L   LC  G + EA  ++  +  K        +  +I +L ++ + +
Sbjct: 454 KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIH 513

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A QLL EM    F+PD    S L+
Sbjct: 514 EAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 180/370 (48%), Gaps = 37/370 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L +A    + M  +G   DV    +L++ L +A   K+    + +MV  G  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PDA ++T L++ LCK+G VG A Q++E M   G   + +TYN+L+ GLC++G L  + + 
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN-------- 242
            + L  +G+  N F+Y+ L+    K++ +  A +L +++  KG KP+ V+YN        
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 243 ---------------------------VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                                      VLL GLCK G  EEAI  F+ +     +PN+  
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           ++ILL  +C  G+ EEA +   E+      P  + YNILI  L   G    A+K+L +M 
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +    P + ++N II  L  E ++   ++ L++M +R   P+E   +   +LC      +
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTS--MLLCLASFDPQ 546

Query: 396 AFAIIQSLGN 405
             A + SL N
Sbjct: 547 WHAALVSLPN 556



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 89/163 (54%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L +A    + +    HKP++   + LL  +C+A K+++A K  + +  +G+ 
Sbjct: 399 DGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N LC KG +  A++L+ +ME+ G   +++T+N +++ L     +++++Q 
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 518

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L+ +  +   P+    S LL  A  +   HAA+  L + + KG
Sbjct: 519 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 561


>gi|255561941|ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538783|gb|EEF40383.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 496

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 199/392 (50%), Gaps = 27/392 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA   ++ M  +   P+    TNL+    K +++ KA +++++MV SG +PD  +Y 
Sbjct: 113 RLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGGVPDVITYN 172

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V  LCK+G +  A+ L+E M   G P + VTYN+++R +    N +Q+++F    +++
Sbjct: 173 MMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVRFWKEQLRR 232

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   TY+ L+E   K  G   AM++L+D+  +G  P+LV+YN L+   CK+G+ E+A
Sbjct: 233 GCPPYLITYTILIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTCKQGKYEDA 292

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ S G EPN ++YN LL SLC  G W+E +E+L  M      PT+VTYN LI  
Sbjct: 293 ALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVVTYNTLING 352

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A+    +MV     P   +YN ++  LC E                     
Sbjct: 353 LCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEE-------------------- 392

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                    +    + ++A  I++ +G + +      Y+ VI  LC   KT  A Q+L  
Sbjct: 393 -------CWMSPSSQFEDAVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEI 445

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           M      PD   YS+LI  L   G++EEA E+
Sbjct: 446 MISSRCKPDEEIYSALINSLADAGMMEEANEL 477



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 197/390 (50%), Gaps = 12/390 (3%)

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           ++ LC  G L  + + +D + ++  +PN    + L+    K   ++ A ++L  ++  GG
Sbjct: 105 LQHLCNKGRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGG 164

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P++++YN+++ GLCK G+ + AI    D+   G  P+VV+YN ++R +     +++A  
Sbjct: 165 VPDVITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVR 224

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
              E       P ++TY ILI  +  H  T  A++VL++M      P   +YN ++   C
Sbjct: 225 FWKEQLRRGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTC 284

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            +GK +     +  M     +PN  TYN L   LC  G   E   I+  +  K+ S P  
Sbjct: 285 KQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVM--KETSHPPT 342

Query: 414 FYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME-------GLIE 464
              Y  +I  LC+ G   +A    ++M      PD  TY++L+  LC E          E
Sbjct: 343 VVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFE 402

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A+EI   M + D++ +   + +++ GLC +++TD++++V ++MI     P+E  Y+ L+
Sbjct: 403 DAVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSRCKPDEEIYSALI 462

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAV 554
             +A    +E + E+ ++L   +V+ + ++
Sbjct: 463 NSLADAGMMEEANELRQKLINIKVLKDQSI 492



 Score = 42.0 bits (97), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA   L  M  + H+ +     +++  LC   K   AI+V+E+M+SS   PD   Y+
Sbjct: 400 QFEDAVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSRCKPDEEIYS 459

Query: 138 YLVNCLCKKGNVGYAMQLVEKM 159
            L+N L   G +  A +L +K+
Sbjct: 460 ALINSLADAGMMEEANELRQKL 481


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 236/475 (49%), Gaps = 6/475 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SKG  P V     ++  LC  N++  A  +++ M   G +P+A  Y  L++ L K G 
Sbjct: 226 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGR 285

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V   ++L+E+M   G   +  T+N  + GLC +  ++++ + +DR++ +G  PN+FTY  
Sbjct: 286 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 345

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD-LPSK 267
           L+    +   V  A  LL+ +      PN+V +N L+ G    GR +EA     + + S 
Sbjct: 346 LMHGLCRMGKVDEARMLLNKV----PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 401

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P++ +YN L+  LC +G    A EL+ EM      P ++TY ILI      G+ + A
Sbjct: 402 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 461

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
             VLDEM       +A  YN +I+ LC + KV   +     M  + CKP+  T+N L   
Sbjct: 462 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 521

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC V K +EA  + Q +  +   +    Y  +I +  R+G   +A +L+ +M   G   D
Sbjct: 522 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 581

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ LI+ LC  G IE+ L +F  M      P+  + N L+ GLC++     +LE  +
Sbjct: 582 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 641

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            MI +G  P+  TY  L+ G+      + +  +  +LQ+  +  ++     ++ +
Sbjct: 642 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 696



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 236/460 (51%), Gaps = 6/460 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++N+    LE M+  G  PDV    + ++ LCK  ++ +A K+++ M+  G  P++ +Y 
Sbjct: 285 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 344

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL-DRLIQ 196
            L++ LC+ G V  A  L+ K+ +     N V +N+L+ G    G L+++   + + ++ 
Sbjct: 345 VLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 400

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G  P+ FTY+ L+    K+  + +A +L++++  KG +PN+++Y +L+   CKEGR EE
Sbjct: 401 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 460

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++  KG   N V YN L+ +LC + + ++A  +  +M      P I T+N LI 
Sbjct: 461 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 520

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L    K + AL +  +M+      +  +YN +I      G +   +K ++ M  R C  
Sbjct: 521 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 580

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           ++ TYNGL   LC  G +++  A+ + + +K  +        +I  LCR G    A + L
Sbjct: 581 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 640

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +M   G TPD  TY+SLI GLC  G  +EAL +F  ++     PD   +N L+   CK 
Sbjct: 641 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 700

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              D +  +    ++ G +PNE T+ ILV     + + E 
Sbjct: 701 GMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQEF 740



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 141/248 (56%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+ DA      M SKG KPD+    +L++ LCK NK ++A+ + + M+  G+I +  
Sbjct: 489 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 548

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++   ++G +  A++LV  M   G P + +TYN L++ LC  GN+ + L   + +
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KGL PN  + + L+    +   +  A++ L D+I +G  P++V+YN L+ GLCK GR 
Sbjct: 609 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 668

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+  F  L  +G  P+ ++YN L+   C EG +++A+ LL+        P  VT+ IL
Sbjct: 669 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 728

Query: 315 IGSLAYHG 322
           + +    G
Sbjct: 729 VSNFIKEG 736



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 147/287 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ +L +A   L+ M  KG   + V    L+  LCK  K++ A+ +   M S G  
Sbjct: 450 DRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCK 509

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  L+  LCK      A+ L + M   G   NT+TYN+L+      G + ++L+ 
Sbjct: 510 PDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 569

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++ ++ +G   +  TY+ L++A  +   +   + L +D+++KG  PN +S N+L+ GLC+
Sbjct: 570 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 629

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  + A+ F RD+  +G  P++V+YN L+  LC  GR +EA  L  ++      P  +T
Sbjct: 630 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 689

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           YN LI      G  D A  +L   V   F P+  ++  +++    EG
Sbjct: 690 YNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 188/455 (41%), Gaps = 73/455 (16%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV--H 220
           GY      Y  L+  L   G    +   L ++ Q+G+V     +  L+   Y   G+   
Sbjct: 124 GYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLF-ILIMKHYGRAGLPGQ 182

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A   LLD       +P   SYNV+L  L      +     F ++ SKG  P V ++ +++
Sbjct: 183 ATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVM 242

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           ++LC+    + A  LL +M      P  + Y  LI +L+  G+ +  LK+L+EM+     
Sbjct: 243 KALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCI 302

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM--LCGVGKVQEAFA 398
           P   ++N  I  LC   ++    K +D+M  R   PN  TY G+ M  LC +GKV EA  
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTY-GVLMHGLCRMGKVDEARM 361

Query: 399 IIQSLGNKQ-------------------------------NSSPQEF-YKYVITSLCRKG 426
           ++  + N                                    P  F Y  +I  LC+KG
Sbjct: 362 LLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 421

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE--------------------- 465
               A +L+ EM   G  P+  TY+ LI   C EG +EE                     
Sbjct: 422 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 481

Query: 466 --------------ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
                         AL +F  M     KPD+  FN+L+ GLCK  + + +L ++Q M+ +
Sbjct: 482 CLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 541

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           G + N  TY  L+     +  ++ + +++ ++  R
Sbjct: 542 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 576



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 35/152 (23%)

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-------YK------ 479
            + YEM   G +P  YT+  +++ LC+   ++ A  +   M  +        Y+      
Sbjct: 221 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 280

Query: 480 ----------------------PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
                                 PDV+ FN  + GLCK  R   + ++   M+ +G  PN 
Sbjct: 281 SKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNS 340

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            TY +L+ G+    +++ +  +L ++    VV
Sbjct: 341 FTYGVLMHGLCRMGKVDEARMLLNKVPNPNVV 372


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 221/454 (48%), Gaps = 37/454 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ K+   F   +R    G K  ++    LL  L K ++      V   M+   I  +  
Sbjct: 97  RNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVI 156

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ---FL 191
           S+  +VN LCK G +  A  ++E M+ +G   N +TYN+L+ G C +G + +  +    L
Sbjct: 157 SFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAIL 216

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++ KG+ PN  TY+ L++   K+  V  AM++  ++  +G +PN+V+YN+L+ GLC +
Sbjct: 217 KEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSD 276

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ +EA+     + S   EPNVV++N+L+   C      EA  L  +M+     P  +TY
Sbjct: 277 GKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTY 336

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             LI +    G+ + A  + + M+     P  ++YN +IA LC +G V      +++M  
Sbjct: 337 TTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS 396

Query: 372 RRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           ++   +  TYN L                                  I SLC+KG++ +A
Sbjct: 397 KKLSADVVTYNIL----------------------------------IDSLCKKGESRKA 422

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL EM + G  P   TY++L+ G C EG +  AL +   ME    + +V   N L+ G
Sbjct: 423 VKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKG 482

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
            C   R + +  +   M+E+G +PN TTY I+ E
Sbjct: 483 FCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKE 516



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 191/381 (50%), Gaps = 4/381 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +  + +V+    ++  LCK  K+ +A  V+E M   G+ P+  +Y  L++  CK G 
Sbjct: 146 MIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205

Query: 149 VGY---AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G    A  ++++M   G   N VTYN L+ G C   N++ +++    + ++GL PN  T
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+     +  V  A+ L D +++   +PN+V++NVL+ G CK     EAI  F D+ 
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G +PN ++Y  L+ + C +GR E+A  L   M      P + TYN LI  L   G   
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +++EMV  +      +YN +I  LC +G+    VK LD+MF +   P+  TYN L 
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G ++ A  +   +  K   +    +  +I   C KG+   A  LL EM + G  
Sbjct: 446 DGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV 505

Query: 445 PDSYTYSSLIRGLCMEGLIEE 465
           P+  TY  +   +  +G + +
Sbjct: 506 PNRTTYEIIKEEMMEKGFVPD 526



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 193/394 (48%), Gaps = 6/394 (1%)

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR-LIQKGLVPNAFTYSFLLEAAYKERGV 219
           DYG+  + ++ N L+ GL      N  ++F+ R +I++ +  N  +++ ++    K   +
Sbjct: 113 DYGFKLSLISCNPLLSGLVKESE-NGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKL 171

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE---AIRFFRDLPSKGFEPNVVSY 276
           + A  +++D+   G  PN+++YN L+ G CK GR  +   A    +++ +KG  PN V+Y
Sbjct: 172 NRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTY 231

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           NIL+   C +     A  +  EM      P +VTYNILI  L   GK D A+ + D+MV 
Sbjct: 232 NILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVS 291

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQE 395
               P+  ++N +I   C    V+  +   + M  +   PN  TY  L    C  G++++
Sbjct: 292 SDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMED 351

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           AFA+   + ++        Y  +I  LCRKG    A  L+ EM     + D  TY+ LI 
Sbjct: 352 AFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILID 411

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
            LC +G   +A+++   M E    P    +N L+ G C+      +L V   M  KG+  
Sbjct: 412 SLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQA 471

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           N  T+ +L++G   +  LE +  +L E+  R +V
Sbjct: 472 NVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV 505



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 148/285 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  ++ A      M  +G +P+VV    L+  LC   K+ +A+ + + MVSS + P+  
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N  CK   V  A+ L   ME  G   N +TY +L+   C  G +  +    + +
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +G+ P   TY+ L+    ++  V AA  L++++++K    ++V+YN+L+  LCK+G +
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A++   ++  KG  P+ V+YN L+   C EG    A  +   M+   +   +VT+N+L
Sbjct: 420 RKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVL 479

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           I      G+ + A  +L+EM++    P+  +Y  I   +  +G V
Sbjct: 480 IKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 145/322 (45%), Gaps = 10/322 (3%)

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N +  ++L+    +  +       F+     GF+ +++S N LL  L  E    +   + 
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVY 143

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM        ++++NI++  L   GK + A  V+++M      P+  +YN +I   C  
Sbjct: 144 REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203

Query: 357 GKVDLVVKC---LDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNS 409
           G++  + K    L +M  +   PNE TYN    G      V      F  +Q  G + N 
Sbjct: 204 GRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNV 263

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  +I  LC  GK  +A  L  +M      P+  T++ LI G C    + EA+ +
Sbjct: 264 VT---YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  ME+    P+   +  L+   CK  R + +  ++ MMI++G  P  +TY  L+ G+  
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380

Query: 530 QDELELSAEVLKELQLRQVVSE 551
           + +++ +  ++ E+  +++ ++
Sbjct: 381 KGDVKAARSLMNEMVSKKLSAD 402



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 98/182 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D ++ DAF     M+ +G  P+V     L+  LC+   +K A  +M  MVS  + 
Sbjct: 341 DAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLS 400

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L++ LCKKG    A++L+++M + G   + VTYN+L+ G C  GNL  +L  
Sbjct: 401 ADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIV 460

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ +KG   N  T++ L++    +  +  A  LL++++ +G  PN  +Y ++   + +
Sbjct: 461 RTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMME 520

Query: 251 EG 252
           +G
Sbjct: 521 KG 522


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 243/507 (47%), Gaps = 12/507 (2%)

Query: 44  VLASTQVTISPK--DSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQA 101
           VLA  +  +  K  + VY    R  G       R  K+ +A    ERM     +P V   
Sbjct: 62  VLAEMRKNVDSKMLEGVYIGIMRDYG-------RKGKVQEAVNVFERMDFYDCEPSVQSY 114

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
             ++  L +     +A KV   M   GI PD  ++T  +   C  G    A++L+  M  
Sbjct: 115 NAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPG 174

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   N V+Y +++ G        ++    D ++++G+ P+  T++ L+    K+  V  
Sbjct: 175 QGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQE 234

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           + KL   ++ +G  PNL ++N+ + GLC++G  +EA R    + S+G  P+V+SYN L+ 
Sbjct: 235 SEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLIC 294

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL-DEMVKGRFR 340
             C   +  EA   L +M      P   TYN +I      G   +A K+L D M KG F 
Sbjct: 295 GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG-FI 353

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
           P   +Y+ +I  LC++G ++  +    +   +  K +   YN L   L   G V +A  +
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           ++ +     S     Y  V+  LC+ G    A  +L +    G  PD +T+++LI G C 
Sbjct: 414 MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK 473

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           +  +++A+EI   M  +   PDV  +N LL GLCK+R+ D  ++ F+ M+EKG  PN  T
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533

Query: 520 YTILVEGIAHQDELELSAEVLKELQLR 546
           Y IL+E      ++  + E+ KE++ R
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTR 560



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 232/464 (50%), Gaps = 2/464 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A+   + M+ +G  PD++    L++ LCK   ++++ K+   ++  G+ P+  ++   +
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LC+KG +  A +L+E +   G   + ++YN+L+ G C    L ++  +L +++  G+ 
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN FTY+ ++    K   +  A K+L D + KG  P+  +Y+ L+ GLC +G    A+  
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F +   KGF+ +++ YN L++ L  +G   +A +L+ +M     SP I TYN+++  L  
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G    A  +L++ +     P   ++N +I   C +  +D  ++ LD M      P+  T
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN L   LC   K+       +++  K  +     Y  +I S C+  K  +A +L  EM 
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGLCKSRRT 498
             G TPD  T  +LI GLC  G +++A E+FV +E EY +      FN ++   C     
Sbjct: 559 TRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNV 618

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            ++ ++F  M      P+  TY ++++       ++L+   L E
Sbjct: 619 SMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 228/465 (49%), Gaps = 8/465 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +++A   LE +VS+G  PDV+    L+   CK +K+ +A   +  MV+SG+ P+  
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N  CK G +  A +++      G+  +  TY+SL+ GLC  G++N+++      
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG   +   Y+ L++   K+  V  A++L+ D++  G  P++ +YN+++ GLCK G  
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A     D  +KG  P++ ++N L+   C +   ++A E+L  M     +P ++TYN L
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L    K D+ +     M++    P+  +YN +I   C + KV   ++   +M  R  
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK-QNSSPQEFYKYVITSLCRKGKTYQAF 432
            P+  T   L   LC  G++ +A+ +  ++  + + S     +  +I + C K     A 
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L ++M      PD+YTY  +I   C  G I+ A    +        P       +L  L
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           C + R   ++ +  +M++ G +P E      V  I   D+ E++A
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPEE------VNSIFEADKKEVAA 721



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 154/353 (43%), Gaps = 45/353 (12%)

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS------YNVLLTGLCKEGRTEEAI 258
           TY  ++E    + G+H   + ++D++A+  K N+ S      Y  ++    ++G+ +EA+
Sbjct: 42  TYKCMIE----KLGLHGKFEAMEDVLAEMRK-NVDSKMLEGVYIGIMRDYGRKGKVQEAV 96

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  +     EP+V SYN ++  L   G + +A+++   M      P + T+ I + S 
Sbjct: 97  NVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSF 156

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+   AL++L+ M       +A SY  +I+    E          D+M  +   P+ 
Sbjct: 157 CITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDI 216

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            T+N L                                  I  LC+KG   ++ +L  ++
Sbjct: 217 LTFNKL----------------------------------IHVLCKKGNVQESEKLFSKV 242

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            K G  P+ +T++  I+GLC +G I+EA  +   +      PDV ++N L+ G CK  + 
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             +      M+  G  PNE TY  ++ G      ++ + ++L++   +  + +
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPD 355


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 234/484 (48%), Gaps = 2/484 (0%)

Query: 63  NRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKM-KKAIKVM 121
           NR+    +D       ++DA      M+ +   P ++Q T LL  + K  +     I + 
Sbjct: 62  NRRDKRKHDDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLT 121

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
           + M  +G+ P+  + + L+NC      V  A  ++ K+   G     VT+ +L+  LC +
Sbjct: 122 KQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKV 181

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           G   Q+++  D ++ +G  P+ +TY+ ++    K     AA  LL  +   G +PN+V+Y
Sbjct: 182 GKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTY 241

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + ++    K+ R  EA+  F  +  KG  P++ +YN L++ LC   +W+EA+ LL EM  
Sbjct: 242 STIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRS 301

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
            +  P IVT+N+L+ ++   GK   A  VL  M +    P   +Y+ ++       +V  
Sbjct: 302 LNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE 361

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
             K  D M  + CKP+  +YN L    C V ++ EA  +   + ++  +     Y  +I 
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIH 421

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            LC+ G   +A  L   M   G  P+ +TYS L+ G C +G   +A  +F  M+    KP
Sbjct: 422 GLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKP 481

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           ++  +N L+  +CKS     + ++F  +  KG  PN   YT ++ G+  +  L+ + E  
Sbjct: 482 NLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAF 541

Query: 541 KELQ 544
           + ++
Sbjct: 542 RNME 545



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 235/466 (50%), Gaps = 1/466 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M   G  P++   + L+       ++  A  V+  ++  G+ P   ++T L+N LCK 
Sbjct: 122 KQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKV 181

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G    AM+L + M   G   +  TY +++ GLC +G    +   L ++ + G  PN  TY
Sbjct: 182 GKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTY 241

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           S ++++  K+R V+ A+ +   +  KG  P++ +YN L+ GLC   + +EA     ++ S
Sbjct: 242 STIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRS 301

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               P++V++N+L+ ++C EG+  EA  +L  M      P +VTY+ L+   +   +   
Sbjct: 302 LNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE 361

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A K+ D M+    +P   SYN +I   C   ++D   +  ++M H+   PN  +YN L  
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIH 421

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC +G ++EA  + +++    N      Y  ++   C++G   +AF+L   M      P
Sbjct: 422 GLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKP 481

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +   Y+ LI  +C  G + +A ++F  +     +P+   +  ++ GLCK    D +LE F
Sbjct: 482 NLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAF 541

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           + M E G  P+E +Y +++ G  H  +   + +++ E++ +  +++
Sbjct: 542 RNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 223/437 (51%), Gaps = 1/437 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +++ AF  L +++  G +P +V  T L+  LCK  K  +A+++ + MV+ G  PD  +Y
Sbjct: 147 QRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTY 206

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T ++N LCK G    A  L++KME+ G   N VTY++++        +N++L     +  
Sbjct: 207 TTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKV 266

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+ P+ FTY+ L++          A  LL+++ +    P++V++NVL+  +CKEG+  E
Sbjct: 267 KGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSE 326

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A    + +   G EP+VV+Y+ L+    +     EA +L   M      P + +YNILI 
Sbjct: 327 AQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILIN 386

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A ++ +EM+     P+  SYN +I  LC  G +         M      P
Sbjct: 387 GYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLP 446

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TY+ L    C  G   +AF + +++ +  +      Y  +I ++C+ G    A +L 
Sbjct: 447 NLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLF 506

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            E+   G  P++  Y+++I GLC EGL++EALE F  MEE    PD  ++N ++ G    
Sbjct: 507 SELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHH 566

Query: 496 RRTDLSLEVFQMMIEKG 512
           +    ++++   M +KG
Sbjct: 567 KDESRAVQLIGEMRDKG 583



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 167/312 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++N+A      M  KG  PD+    +L+  LC  ++ K+A  ++  M S  I+
Sbjct: 246 DSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIM 305

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  LV+ +CK+G V  A  +++ M + G   + VTY+SL+ G  +   + ++ + 
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL 365

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I KG  P+ F+Y+ L+    K + +  A +L +++I +G  PN VSYN L+ GLC+
Sbjct: 366 FDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQ 425

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G   EA   F+++ + G  PN+ +Y+ILL   C +G + +A  L   M      P +V 
Sbjct: 426 LGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVM 485

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNILI ++   G    A K+  E+     +P+A  Y  II  LC EG +D  ++    M 
Sbjct: 486 YNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNME 545

Query: 371 HRRCKPNEGTYN 382
              C P+E +YN
Sbjct: 546 EDGCPPDEISYN 557



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 142/264 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++ K+++A   L+ M   G +PDVV  ++L+Y     +++ +A K+ + M++ G  
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCK 375

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SY  L+N  CK   +  A QL  +M   G   N V+YN+L+ GLC LG+L ++   
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNL 435

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G +PN FTYS LL+   K+     A +L   + +   KPNLV YN+L+  +CK
Sbjct: 436 FKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCK 495

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G   +A + F +L  KG +PN   Y  ++  LC EG  +EA E    M+     P  ++
Sbjct: 496 SGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEIS 555

Query: 311 YNILIGSLAYHGKTDHALKVLDEM 334
           YN++I    +H     A++++ EM
Sbjct: 556 YNVIIRGFLHHKDESRAVQLIGEM 579



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 100/196 (51%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A      M+ +G  P+ V    L++ LC+   +++A  + + M ++G +P+  +Y+
Sbjct: 393 RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYS 452

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK+G  G A +L   M+      N V YN L+  +C  GNL  + +    L  K
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PNA  Y+ ++    KE  +  A++   ++   G  P+ +SYNV++ G         A
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRA 572

Query: 258 IRFFRDLPSKGFEPNV 273
           ++   ++  KGF  +V
Sbjct: 573 VQLIGEMRDKGFIADV 588



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 69/127 (54%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF     M S   KP++V    L+  +CK+  ++ A K+   +   G+ P+A  YT ++N
Sbjct: 467 AFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIIN 526

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK+G +  A++    ME+ G P + ++YN ++RG     + ++++Q +  +  KG + 
Sbjct: 527 GLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIA 586

Query: 202 NAFTYSF 208
           +  T ++
Sbjct: 587 DVGTTAW 593



 Score = 45.8 bits (107), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 4/146 (2%)

Query: 29  IPNLHSFS-LNKGFIR--VLASTQVTISPKDSVYTKPNRKPGNN-NDTRHRDHKLNDAFL 84
           +PNL ++S L  GF +               S Y+KPN    N   D   +   L DA  
Sbjct: 445 LPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARK 504

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
               +  KG +P+    T ++  LCK   + +A++    M   G  PD  SY  ++    
Sbjct: 505 LFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFL 564

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVT 170
              +   A+QL+ +M D G+  +  T
Sbjct: 565 HHKDESRAVQLIGEMRDKGFIADVGT 590


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 234/476 (49%), Gaps = 2/476 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA   L  M   G  PD V    LL   C+   + +A  ++  M   G+ P   +Y  
Sbjct: 220 LADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNT 279

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV+   + G +  A ++VE M   G+  +  TYN L  GLC  G ++++ +  D + + G
Sbjct: 280 LVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLG 339

Query: 199 -LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L+P+  TY+ L +A +K R    A++LL+++  KG K  LV++N+++ GLCK+G  E A
Sbjct: 340 TLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGA 399

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     +   G  P+V++YN L+ + C  G   +A  L+ EM          T N ++ +
Sbjct: 400 LGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYN 459

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + + A  +L    +  F P   SY  ++A    E   +  ++  D+M  ++  P+
Sbjct: 460 LCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPS 519

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L   L  +G+++EA   +  L  K        Y  +I + C++G    AFQ   
Sbjct: 520 ISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHN 579

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M +  F PD  T ++L+ GLC+ G +++AL++F    E   K DV  +N L+  +CK  
Sbjct: 580 KMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDG 639

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             D +L  F  M  +G  P+  TY +++  ++     E +  +L +L     +S+S
Sbjct: 640 DVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQS 695



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 232/492 (47%), Gaps = 41/492 (8%)

Query: 95  KPDVVQATNLLYDLCKA--NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           +P +  A  +L  L ++     + ++     +V+  + P+  ++  LV+  C KG +  A
Sbjct: 164 RPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADA 223

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           +  +  M+ +G   + VTYN+L+   C  G L ++   L R+ + G+ P   TY+ L+ A
Sbjct: 224 LSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSA 283

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEP 271
             +   +  A K+++ + A G +P+L +YNVL  GLC+ G+ +EA R   ++   G   P
Sbjct: 284 YARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLP 343

Query: 272 NVVSYNILLRSLCMEGRWE-EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           +VV+YN L  + C + R   +A  LL EM       T+VT+NI+I  L   G+ + AL  
Sbjct: 344 DVVTYNTLADA-CFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCG 389
           L++M      P   +YN +I   C  G +      +D+M  R  K +  T N  L  LC 
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462

Query: 390 VGKVQEAFAIIQSLGNKQ-------------------NSSPQ----------------EF 414
             + +EA  ++QS   +                    NS P                   
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I  L R G+  +A   L E+ + G  PD  TY+ +I   C EG +E A +    M 
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E  +KPDV   N L+ GLC + + D +L++F+  +EKG+  +  TY  L++ +    +++
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642

Query: 535 LSAEVLKELQLR 546
            +     +++ R
Sbjct: 643 TALHFFADMEAR 654



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 199/415 (47%), Gaps = 38/415 (9%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA   LE M  KG K  +V    ++  LCK  +++ A+  +  M   G+ PD  +Y  L
Sbjct: 362 SDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTL 421

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  CK GN+  A  L+++M   G   +T T N+++  LC      ++   L    Q+G 
Sbjct: 422 IHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGF 481

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P+  +Y  ++ A +KE     A++L D++I K   P++ +YN L+ GL + GR +EAI 
Sbjct: 482 MPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAID 541

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              +L  KG  P+  +YNI++ + C EG  E A +   +M      P +VT N L+  L 
Sbjct: 542 KLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLC 601

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
            +GK D ALK+ +  V+   +    +YN +I  +C +G VD  +     M  R  +P+  
Sbjct: 602 LNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAF 661

Query: 380 TYN-GLAMLCGVGKVQEAFAIIQSLG---------------------------------- 404
           TYN  L+ L   G+ +EA  ++  L                                   
Sbjct: 662 TYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEET 721

Query: 405 --NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
             N Q+S+  E Y  ++  LC  G+  +A  +L EM + G + DS TY +L+ GL
Sbjct: 722 VENPQDSA-SEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 146/320 (45%), Gaps = 5/320 (1%)

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRT-- 254
           G +P+       L A  + R  H A +LL  +  +   +P+L + N +L+ L +   T  
Sbjct: 126 GNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSP 185

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + ++  FR + +    PN  ++N+L+ + C +G   +A   L+ M G   SP  VTYN L
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + +    G    A  +L  M K    P+  +YN +++     G +    K ++ M     
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK-TYQAF 432
           +P+  TYN LA  LC  GKV EAF +   +       P       +   C K + +  A 
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +LL EM + G      T++ +I+GLC +G +E AL     M +    PDV  +N L+   
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 493 CKSRRTDLSLEVFQMMIEKG 512
           CK+     +  +   M+ +G
Sbjct: 426 CKAGNIAKAYTLMDEMVRRG 445



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 37/181 (20%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A    E  V KG K DV+    L+  +CK   +  A+     M + G+ PDA +Y 
Sbjct: 605 KLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGY--------------------------------- 164
            +++ L + G    A  ++ K+ + G                                  
Sbjct: 665 VVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVEN 724

Query: 165 PTNTVT--YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK--ERGVH 220
           P ++ +  Y  LV GLC  G   ++   LD ++QKG+  ++ TY  L+E   K  +R  H
Sbjct: 725 PQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKRLTH 784

Query: 221 A 221
           A
Sbjct: 785 A 785


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 230/426 (53%), Gaps = 13/426 (3%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+ V     +   C+   + +A+++++ M   G  PD   Y+ L+N   ++G+V  A+ L
Sbjct: 223 PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 282

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +  M       NTV YN+ ++GLC+        + +  +++KG  PN  T+S L+ +  +
Sbjct: 283 LNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 339

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              V +A+++L+ +   G +P+ V+YN+++  L + GR ++A+R    +  K   P+ + 
Sbjct: 340 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALG 396

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +N +L+  C   RW +A+EL+A+M   D     +T+NILI +L  +G  ++A +V ++M 
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMP 456

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
           + R  P   +Y+ ++     +G V++ ++    M    CKP+  +YN  L  LC   + +
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWE 513

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A  +I  +  K     +  +  +I SLC+KG   +A ++L +M  YG TPD +TY++LI
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G   +G +++AL++   M     KPD  ++N+ L GLC++ R   + E+   M+     
Sbjct: 574 NGFSEQGRLDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCT 630

Query: 515 PNETTY 520
           PNE T+
Sbjct: 631 PNEVTF 636



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 236/446 (52%), Gaps = 14/446 (3%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           V    L+   C+  ++  A +V+    ++G   +  +YT L++  C+ G +  A++L+  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M       +T TYN++++GLC+     ++ + +  +I+    PN  T++  + +  +   
Sbjct: 184 MP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           +  A++LLD +   G  P++V Y+ L+ G  ++G  ++A+     +  K   PN V YN 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNA 297

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
            L+ LC+  RWE+  EL+AEM     SP   T+++LI SL  +   D A++VL++M K  
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAF 397
             P   +YN II  L   G+VD  ++ L+ M    CKP+   +N  L   C   +  +A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDAS 414

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +I  +        +  +  +I +LC+ G    A Q+  +M +Y  TPD  TYSSL+ G 
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
             +GL+E A+++F  M     KPD+ ++NA+L GLC++ R + + E+   M+ K   PNE
Sbjct: 475 SEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 518 TTYTILVEGIAHQDELELSAEVLKEL 543
            T+ IL+  +  +  ++ + EVL+++
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQM 557



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 243/507 (47%), Gaps = 56/507 (11%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +L DA   L    + G   +VV  T L+   C++ ++  A++   ++ S  + PD  
Sbjct: 136 RDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALR---LIASMPVAPDTY 191

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  LC       A +L+ +M     P N VT+ + +R  C  G L++++Q LD++
Sbjct: 192 TYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM 251

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G  P+   YS L+    ++  V  A+ LL+ ++ K   PN V YN  L GLC   R 
Sbjct: 252 PRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERW 308

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+      ++  KG  PN  ++++L+ SLC     + A E+L +M+     P  V YNI+
Sbjct: 309 EDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNII 368

Query: 315 IGSLAYHGKTDHALKVLDEMV------------KG----------------RFRPSAA-- 344
           I SL+  G+ D AL++L+ MV            KG                 FR      
Sbjct: 369 INSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLI 428

Query: 345 --SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAI 399
             ++N +I  LC  G V+   +  +QM   RC P+  TY+ L  L G    G V+ A  +
Sbjct: 429 EMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSL--LNGFSEQGLVEVAIQL 486

Query: 400 IQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            +S+  K    P  F Y  V+  LCR  +   A +L+ EM      P+  T++ LI  LC
Sbjct: 487 FRSMPCK----PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLC 542

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            +GL++ A+E+   M  Y   PD+  +NAL+ G  +  R D +L++   M  K   P+  
Sbjct: 543 QKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAI 599

Query: 519 TYTILVEGIAH----QDELELSAEVLK 541
           +Y   ++G+      QD  EL AE+L+
Sbjct: 600 SYNSTLKGLCRAERWQDAEELVAEMLR 626



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 181/360 (50%), Gaps = 45/360 (12%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP+ V     L  LC A + +   ++M  MV  G  P+ ++++ L++ LC+   V  A++
Sbjct: 289 KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 348

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           ++E+ME YG   +TV YN ++  L   G ++ +L+ L+ ++ K   P+A  ++ +L+   
Sbjct: 349 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFC 405

Query: 215 KERGVHAAMKL------------------LDDIIAKGG-----------------KPNLV 239
           +    H A +L                  L D + + G                  P++V
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIV 465

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +Y+ LL G  ++G  E AI+ FR +P K   P++ SYN +L+ LC   RWE+A EL+AEM
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            G D  P  VT+NILI SL   G  D A++VL++M      P   +YN +I     +G++
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D  +K L  M    CKP+  +YN  L  LC   + Q+A  ++  +   + +  +  +KY 
Sbjct: 583 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYA 639



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 6/206 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++  +N A    E+M      PD+V  ++LL    +   ++ AI++   M      
Sbjct: 437 DTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK--- 493

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SY  ++  LC+      A +L+ +M     P N VT+N L+  LC  G ++++++ 
Sbjct: 494 PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEV 553

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+++   G  P+ FTY+ L+    ++  +  A+KLL  +     KP+ +SYN  L GLC+
Sbjct: 554 LEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCR 610

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSY 276
             R ++A     ++      PN V++
Sbjct: 611 AERWQDAEELVAEMLRNKCTPNEVTF 636


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 236/476 (49%), Gaps = 4/476 (0%)

Query: 73  RHRDH---KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
           RH++     +NDA      MV+    P +V+   L   L +    K  + + + M  +GI
Sbjct: 63  RHKNRTFRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGI 122

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
             D  S T L+NC C+  +V Y   ++ K+   G   N +T+++L+ G C+ G + ++++
Sbjct: 123 SHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIE 182

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             D ++ +G  PN  +YS +++   +       +KLL+ +   G +P++V YN ++  LC
Sbjct: 183 LFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLC 242

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K+    EA+  F  +   G  P VV+Y  L+  L   GRW+EA  LL EM GG+  P +V
Sbjct: 243 KDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLV 302

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            +++LI  +   G+   A  +L  M +    P  A+YN ++   C   +V    K  + M
Sbjct: 303 AFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVM 362

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +   P+  +++ L    C   ++ EA  +   + ++        Y  +I+ LC+  + 
Sbjct: 363 ISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRP 422

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A +L  +M   G+ P+  TYS L+  L  +G +++A+ +F  ME    KPD+  +N +
Sbjct: 423 LEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIM 482

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + G+CK  +   + E+F  +  KG  PN    T  ++G+     L+ + +  ++++
Sbjct: 483 IDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQME 538



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 190/360 (52%), Gaps = 4/360 (1%)

Query: 30  PNLHSFSLN-KGFIRVLASTQVT--ISPKDSVYTKPNRKPGNN-NDTRHRDHKLNDAFLQ 85
           PN+HS+S+  KG  RV  +T+V   +     V  +P+    N   D   +D  +N+A   
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHI 253

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
             +M   G  P VV  T+L++ L    + K+A  ++  M    I+PD  +++ L++ +CK
Sbjct: 254 FCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCK 313

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G V  A  +++ M + G   +  TYN+L+ G C+   + ++ +  + +I KG +P+ F+
Sbjct: 314 EGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFS 373

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +S L+    K + +  A +L D++  +G  P+ VSYN L++GLC+  R  EA   F+D+ 
Sbjct: 374 FSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMH 433

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S G+ PN+V+Y+ILL  L  +G  ++A  L   M+     P +VTYNI+I  +  +GK  
Sbjct: 434 SNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFK 493

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++  E+     +P+     P I  +C  G +D   K   QM    C P +G  NG A
Sbjct: 494 DARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCINGRA 553



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 157/338 (46%), Gaps = 1/338 (0%)

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
           R ++ A+   + ++     P++V +  L + L +    +  +   + +   G   +V+S 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
            IL+   C     +    +L ++      P ++T++ LI      GK   A+++ D MV 
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQE 395
             ++P+  SY+ II  LC  GK   V+K L+ M    C+P+   YN +   LC    V E
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  I   +           Y  +I  L   G+  +AF LL EM      PD   +S LI 
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
            +C EG + EA  I   M E   +PDV  +N L+ G C       + +VF++MI KG+MP
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +  +++ILV G      ++ + ++  E+  R ++ ++ 
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTV 407



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+  F  + +    P++V +  L  +L     ++    L  +M+    S  +++  ILI
Sbjct: 74  DALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILI 133

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                    D+   VL +++K    P+  +++ +I   C EGK+                
Sbjct: 134 NCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKI---------------- 177

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
                          G+  E F ++ + G K N      Y  +I  LCR GKT +  +LL
Sbjct: 178 ---------------GRAIELFDVMVARGYKPNVHS---YSIIIKGLCRVGKTTEVIKLL 219

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M   G  PD   Y++++  LC + L+ EA+ IF  M+     P V  + +L+ GL   
Sbjct: 220 EHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNL 279

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            R   +  +   M     MP+   +++L++ +  + E+  +  +LK +      +E  VE
Sbjct: 280 GRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM------TEMGVE 333

Query: 556 RLVMQYD 562
             V  Y+
Sbjct: 334 PDVATYN 340


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 238/453 (52%), Gaps = 7/453 (1%)

Query: 96  PDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           P   + ++++ D LC  ++ + A+  +         P   S+  +++  CK G    A  
Sbjct: 147 PQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKS 206

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
               M  YG   +T +YN L+ GL + G++ ++L+  + + ++GL P+  TY  + +  +
Sbjct: 207 FFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFH 266

Query: 215 KERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
               +  A +++  ++   G KP+LV+Y VL+ G C+ G  EEA+R  RDL S GF+ NV
Sbjct: 267 LLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNV 326

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           + Y++LL SLC  G+ +EA +LL EM+  +  P +VTY+ILI  L   GK   A+++  E
Sbjct: 327 ILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKE 386

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---V 390
           M   R  P++ +++ I+  LC +G +       D +     +P+   YN   M+ G   +
Sbjct: 387 MCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYN--IMIDGYVKL 444

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V+EA  + + L +K  +     +  +I   C+  K  +A +LL  +  +G  P + TY
Sbjct: 445 GDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTY 504

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++L+   C EG I +  E+ + M   D +P V  +  ++ GLCK R+ + S+++ + M  
Sbjct: 505 TTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRA 564

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           KG  P++ TY  +++      ++  + E+L ++
Sbjct: 565 KGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM 597



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 223/431 (51%), Gaps = 2/431 (0%)

Query: 84  LQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           L+L R ++S G + +V+  + LL  LCK  ++ +A++++  M ++ + PD  +Y+ L++ 
Sbjct: 311 LRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHG 370

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LCK+G V  A+QL ++M       N+  ++ +++GLC  G L+ +  + D LI   L P+
Sbjct: 371 LCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPD 430

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              Y+ +++   K   V  A++L   +  K   P++V++N L+ G CK  +  EA R   
Sbjct: 431 VTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLE 490

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +   G EP+ V+Y  L+ + C EG   + +ELL EM+  D  PT+VTY ++I  L    
Sbjct: 491 SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K + ++++L++M      P   +YN II   C    +    + LD M     +P   TYN
Sbjct: 551 KLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYN 610

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC  G V++A  ++ SL ++  +  +  Y  +I + C KG   +A ++ ++M + 
Sbjct: 611 VLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEK 670

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           GF      YS++I  LC   LI EA   F +M      PD + F  +L    ++      
Sbjct: 671 GFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSV 730

Query: 502 LEVFQMMIEKG 512
            E+  +MI+ G
Sbjct: 731 FELLAVMIKFG 741



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 220/457 (48%), Gaps = 2/457 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G  PD      L++ L  A  M++A+++   M   G+ PD  +Y  +       G 
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL 270

Query: 149 VGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +  A ++++KM  D G   + VTY  L+ G C +GN+ ++L+    L+  G   N   YS
Sbjct: 271 MSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYS 330

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            LL +  K   V  A++LL ++ A   +P+LV+Y++L+ GLCK+G+ ++AI+ ++++   
Sbjct: 331 VLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFN 390

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              PN  +++ +L+ LC +G   +A      +   +  P +  YNI+I      G  + A
Sbjct: 391 RIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEA 450

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
           +++   +      PS  ++N +I   C   KV    + L+ +     +P+  TY  L   
Sbjct: 451 VRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C  G + +   ++  +  K        Y  VI  LC++ K  ++ QLL +M   G  PD
Sbjct: 511 YCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPD 570

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+++I+  C    + +A E+   M  ++ +P    +N L+ GLC+    + +  V  
Sbjct: 571 QITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLV 630

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + ++     +  YT +++    + + + + +V  ++
Sbjct: 631 SLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQM 667



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 207/426 (48%), Gaps = 2/426 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME-MMVSSGIIPDASSYTYLVNCLCKKG 147
           M  +G +PD+V    +         M  A ++++ M+   G+ PD  +YT L+   C+ G
Sbjct: 246 MEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMG 305

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N+  A++L   +   G+  N + Y+ L+  LC  G ++++LQ L  +    L P+  TYS
Sbjct: 306 NIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYS 365

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    K+  V  A++L  ++      PN  +++ +L GLC++G   +A  +F  L   
Sbjct: 366 ILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMS 425

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              P+V  YNI++      G  EEA  L   +     +P+IVT+N LI     + K   A
Sbjct: 426 NLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEA 485

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            ++L+ +      PSA +Y  ++   C EG ++ + + L +M  +  +P   TY  +   
Sbjct: 486 RRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKG 545

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC   K++E+  +++ +  K  +  Q  Y  +I   C+     +AF+LL +M  +   P 
Sbjct: 546 LCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPT 605

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ LI GLC  G +E+A  + V +++ +       +  ++   C       +++VF 
Sbjct: 606 PATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFH 665

Query: 507 MMIEKG 512
            M+EKG
Sbjct: 666 QMVEKG 671



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 228/484 (47%), Gaps = 5/484 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA   L +M  +  +P +    +LLY+L   + M     V   +  SG    A + + 
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIM---WDVYNDIKDSGTPQSARTSSI 155

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V+ LC +     A+  + + +   +  + V++N+++   C LG  + +  F   +++ G
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++P+ ++Y+ L+        +  A++L +D+  +G +P++V+Y ++  G    G    A 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 259 RFFRD-LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              +  L  +G +P++V+Y +L+   C  G  EEA  L  ++        ++ Y++L+ S
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D AL++L EM     +P   +Y+ +I  LC +GKV   ++   +M   R  PN
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              ++G L  LC  G + +A     SL           Y  +I    + G   +A +L  
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            +     TP   T++SLI G C    + EA  +   ++ +  +P    +  L+   C+  
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
             +   E+   M  K   P   TYT++++G+  Q +LE S ++L++++ + +  +     
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 557 LVMQ 560
            ++Q
Sbjct: 576 TIIQ 579



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 198/408 (48%), Gaps = 42/408 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A   L  M +   +PD+V  + L++ LCK  K+++AI++ + M  + I P++ +++
Sbjct: 341 QVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHS 400

Query: 138 YLVNCLCKKG-----------------------------------NVGYAMQLVEKMEDY 162
            ++  LC+KG                                   +V  A++L +++ D 
Sbjct: 401 GILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDK 460

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
               + VT+NSL+ G C    + ++ + L+ +   GL P+A TY+ L+ A  +E  ++  
Sbjct: 461 AITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKL 520

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            +LL ++  K  +P +V+Y V++ GLCK+ + EE+++   D+ +KG  P+ ++YN +++ 
Sbjct: 521 HELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQC 580

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C      +A ELL +M   +  PT  TYN+LI  L  +G  + A +VL  +       +
Sbjct: 581 FCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLT 640

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQM----FHRRCKPNEGTYNGLAMLCGVGKVQEAFA 398
             +Y  +I   C +G     VK   QM    F    K      N L   C + + +  F 
Sbjct: 641 KVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFC 700

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           I+ S G    S  QE ++ ++ +  R G  +  F+LL  M K+G   D
Sbjct: 701 IMLSDGV---SPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 228/471 (48%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+ +A    ERM      P V     ++  L +     +A KV   M    +  D  
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  +   C+ G    A++L+  M   G  +N V Y ++V G    G+ +++ +  D +
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++  L P+  T++ L+ A  K+  V  + +L D ++ +G  PNL ++N+ + GLCKEG  
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+R    +  +G  P+VV+YN ++  LC + R  EA E L +M  G   P   TYN +
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G    A ++L + V   F+P   +Y  ++   C +G  D  +        +  
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+   YN L   LC  G +  A  ++  +  K        Y  +I  LC+ G    A  
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+ +    G  PD +TY++L+ G C +  ++ A+E+   M      PDV  +N LL GLC
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K+ +++  +E+F+ M EKG  PN  TY  ++E + +  ++  + ++L E++
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK 637



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 238/477 (49%), Gaps = 3/477 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            N A     RM  K  + DV   T  +   C+  +   A++++  M   G   +A +Y  
Sbjct: 206 FNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCT 265

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V    + G+   A +L ++M +     +  T+N LV  LC  G + +S +  D+++++G
Sbjct: 266 VVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRG 325

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + PN FT++  ++   KE  +  A++LL  +  +G +P++V+YN ++ GLC++ R  EA 
Sbjct: 326 VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE 385

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                + + GFEPN  +YN ++   C +G   +AN +L +       P   TY  L+   
Sbjct: 386 ECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGF 445

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  D A+ V  + +    RPS   YN +I  LC +G +   ++ +++M  + CKP+ 
Sbjct: 446 CQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDI 505

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            TYN +   LC +G + +A  +I     K    P  F Y  ++   CR+ K   A +L+ 
Sbjct: 506 WTYNLIINGLCKMGCLSDANHLIGDAITK-GCIPDIFTYNTLVDGYCRQLKLDSAIELVN 564

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G TPD  TY++L+ GLC     EE +EIF  M E    P++  +N ++  LC S+
Sbjct: 565 RMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSK 624

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           + + ++++   M  KG  P+  ++  L+ G     +L+ +  + + ++ +  VS + 
Sbjct: 625 KVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTT 681



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 226/435 (51%), Gaps = 2/435 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDV     L++ LCK   + ++ ++ + ++  G+ P+  ++   +  LCK+G++  A++L
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +  +   G   + VTYN+++ GLC    + ++ + L +++  G  PN FTY+ +++   K
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +  V  A ++L D + KG KP+  +Y  L+ G C++G  ++A+  F+D   KG  P+++ 
Sbjct: 413 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN L++ LC +G    A +L+ EM      P I TYN++I  L   G    A  ++ + +
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
                P   +YN ++   C + K+D  ++ +++M+ +   P+  TYN L   LC   K +
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           E   I +++  K  +     Y  +I SLC   K  +A  LL EM   G TPD  ++ +LI
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 652

Query: 455 RGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
            G C  G ++ A  +F  ME +YD       +N ++    +     ++L +F  M + G 
Sbjct: 653 TGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGC 712

Query: 514 MPNETTYTILVEGIA 528
            P+  TY +L++G  
Sbjct: 713 DPDNYTYRVLIDGFC 727



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 230/451 (50%), Gaps = 3/451 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A   L  +  +G +PDVV    ++  LC+ +++ +A + +  MV+ G  P+  
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  CKKG V  A ++++     G+  +  TY SLV G C  G+ +Q++      
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KGL P+   Y+ L++   ++  +  A++L++++  KG KP++ +YN+++ GLCK G  
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A     D  +KG  P++ +YN L+   C + + + A EL+  M     +P ++TYN L
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L    K++  +++   M +    P+  +YN II  LC+  KV+  V  L +M  +  
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN-SSPQEFYKYVITSLCRKGKTYQAF 432
            P+  ++  L    C VG +  A+ + + +  + + S     Y  +I++   +     A 
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMAL 701

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L  EM K G  PD+YTY  LI G C  G + +  +  +   E  + P +  F  +L  L
Sbjct: 702 RLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           C   +   ++ +  +M++K  +P +T  TI 
Sbjct: 762 CVEHKVQEAVGIIHLMVQKDIVP-DTVNTIF 791



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 135/313 (43%), Gaps = 37/313 (11%)

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG-DRSPTIVTYNILIGSLAYHGKTD 325
           +GF+  + +Y  +L+ L   G++ E   LL+EM    D +     Y   +      GK  
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQ 172

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GL 384
            A+   + M      PS  SYN I+  L   G  +   K   +M  ++ + +  TY   +
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232

Query: 385 AMLCGVGKVQEAFAIIQS---LGNKQNSSP-----QEFYKY------------------- 417
              C  G+   A  ++++   LG   N+         FY++                   
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLC 292

Query: 418 --------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                   ++ +LC+KG   ++ +L  ++ K G  P+ +T++  I+GLC EG ++ A+ +
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              +     +PDV  +N ++ GLC+  R   + E    M+  G  PN+ TY  +++G   
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412

Query: 530 QDELELSAEVLKE 542
           +  +  +  +LK+
Sbjct: 413 KGMVVDANRILKD 425



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 100/248 (40%), Gaps = 51/248 (20%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKAN------------------------- 112
           K+N+A   L  M SKG  PDVV    L+   CK                           
Sbjct: 625 KVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATY 684

Query: 113 -----------KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
                       MK A+++   M  +G  PD  +Y  L++  CK GNV    + + +  +
Sbjct: 685 NIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIE 744

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G+  +  T+  ++  LC+   + +++  +  ++QK +VP+  T + + EA  K    + 
Sbjct: 745 KGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFEADKKGHITYH 802

Query: 222 AMKLL-----DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEPNVVS 275
           A + L     D  I K   PN  S       L +E R+   +  F  +   G F+PNVV 
Sbjct: 803 AYEFLYDGVRDKKILKKKHPNWNS-------LRREPRSSADVWCFWFVSRMGAFKPNVVK 855

Query: 276 YNILLRSL 283
             +   SL
Sbjct: 856 ITLKSSSL 863


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 251/523 (47%), Gaps = 43/523 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLC-KANKMKKAIKVMEMMVSSGIIPDASSYT 137
           L    L   +MVSKG  PDV     +L  L  + N +  A +V  +MV  GI P   +Y 
Sbjct: 147 LEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYN 206

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CKKG V  A+QL+ +M+  G   N VTYN LV GL   G + Q+ + +  +++ 
Sbjct: 207 TMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRL 266

Query: 198 GLVPNAFTYSFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           GL  + +TY  L+   Y E+G +  A +L ++++++G  P +V+YN ++ GLCK GR  +
Sbjct: 267 GLEVSVYTYDPLIRG-YCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSD 325

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A +    + +K   P++VSYN L+      G   EA  L AE+     +P++VTYN LI 
Sbjct: 326 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLID 385

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G  D A+++ DEM+K    P   ++   +   C  G + +  +  D+M +R  +P
Sbjct: 386 GLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQP 445

Query: 377 NEGTYNGLAMLCG---VGKVQEAFAI----------------------IQSLGNKQNSS- 410
           +   Y  +  + G   +G   +AF +                      +  LGN + +S 
Sbjct: 446 DRFAY--ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASE 503

Query: 411 -----------PQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
                      P    Y  +I +    G   +A  L  EM   G  P   TY+ LI    
Sbjct: 504 LVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYA 563

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
           + G ++ A+  F  M E    P+V  +NAL+ GLCK R+ D +   F  M  KG  PN+ 
Sbjct: 564 VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKY 623

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           TYTIL+    +    + +  + K++  R++  +S   R ++++
Sbjct: 624 TYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKH 666



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 194/408 (47%), Gaps = 34/408 (8%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M+S+G  P VV    ++Y LCK  ++  A K++++MV+  ++PD  SY  L+    + 
Sbjct: 296 EEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 355

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           GN+G A  L  ++       + VTYN+L+ GLC LG+L+ +++  D +I+ G  P+ FT+
Sbjct: 356 GNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTF 415

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  +    K   +  A +L D+++ +G +P+  +Y   + G  K G   +A     ++ +
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 475

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +GF P++++YN+ +  L   G  +EA+EL+ +M      P  VTY  +I +    G    
Sbjct: 476 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRK 535

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A  +  EM+     PS  +Y  +I      G++ L +    +M  +   PN  TYN L  
Sbjct: 536 ARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL-- 593

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
                                           I  LC+  K  QA+    EM   G +P+
Sbjct: 594 --------------------------------INGLCKVRKMDQAYNFFAEMQAKGISPN 621

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
            YTY+ LI   C  G  +EAL ++  M + + +PD     +LL  L K
Sbjct: 622 KYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 141/276 (51%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M+  G  PDV   T  +   CK   +  A ++ + M++ G+ PD  +Y   +    K 
Sbjct: 401 DEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 460

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G+   A  + E+M   G+P + +TYN  + GL  LGNL ++ + + +++  GLVP+  TY
Sbjct: 461 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 520

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++ A      +  A  L  ++++KG  P++V+Y VL+      GR + AI  F ++  
Sbjct: 521 TSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 580

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG  PNV++YN L+  LC   + ++A    AEM     SP   TY ILI      G    
Sbjct: 581 KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQE 640

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           AL++  +M+    +P + ++  ++  L  + K+ +V
Sbjct: 641 ALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVV 676



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 3/209 (1%)

Query: 78  KLND---AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           KL D   AF   E M+++G  PD++     +  L K   +K+A ++++ M+ +G++PD  
Sbjct: 459 KLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV 518

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT +++     G++  A  L  +M   G   + VTY  L+    + G L  ++     +
Sbjct: 519 TYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEM 578

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG+ PN  TY+ L+    K R +  A     ++ AKG  PN  +Y +L+   C  G  
Sbjct: 579 HEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHW 638

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +EA+R ++D+  +  +P+  ++  LL+ L
Sbjct: 639 QEALRLYKDMLDREIQPDSCTHRSLLKHL 667



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 101/198 (51%), Gaps = 1/198 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D  H+   L +A   +++M+  G  PD V  T++++    A  ++KA  +   M+S GI 
Sbjct: 490 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIF 549

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +YT L++    +G +  A+    +M + G   N +TYN+L+ GLC +  ++Q+  F
Sbjct: 550 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNF 609

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG+ PN +TY+ L+           A++L  D++ +  +P+  ++  LL  L K
Sbjct: 610 FAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669

Query: 251 EGRTEEAIRFFRDLPSKG 268
           + +    +R   ++ + G
Sbjct: 670 DYKL-HVVRHLENVIAAG 686


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 235/463 (50%), Gaps = 1/463 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  +G KP++V    L+   C+   +  A  V   ++  G +PD  ++T L+  LC K
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A    +K+   G+  + ++Y +L+ GLC +G    +L  L R+    + PN   Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++++  K + V+ A  L  ++I+KG  P++V+Y+ L++G C  G+  +AI  F  +  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +  +P+V ++NIL+ + C +G+ +E   +   M      P  VTYN L+       + + 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A  + + M +G   P   SY+ +I   C   K D  +    +M  +   P+  TY+ L  
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            L   G++  A  ++  + ++        Y  ++ +LC+  +  +A  LL ++   G  P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           + YTYS LI+GLC  G +E+A ++F  +    +  +VD +  ++ G C     + +L + 
Sbjct: 469 NMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALL 528

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             M + G +P+  TY I++  +  +DE +++ ++L+E+  R V
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGV 571



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 220/437 (50%), Gaps = 1/437 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF    +++  G+ PD +  T L+  LC   ++++A    + +V+ G   D  SY  L++
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G    A+ L+++++      N V YN+++  +C +  +N++      +I KG+ P
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISP 258

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TYS L+        ++ A+ L + +I +  KP++ ++N+L+   CK+G+ +E    F
Sbjct: 259 DVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G +PN V+YN L+   C+     +A  +   M  G  +P I +Y+I+I      
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            K D A+ +  EM +    P   +Y+ +I  L   G++   ++ +DQM  R   P   TY
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTY 438

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N  L  LC + +V +A A++  L +K        Y  +I  LC+ GK   A ++   +  
Sbjct: 439 NSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLV 498

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G   +  TY+ +I+G C+EGL  EAL +   ME+    PD   +  ++L L K    D+
Sbjct: 499 KGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDM 558

Query: 501 SLEVFQMMIEKGQMPNE 517
           + ++ + MI +G  P +
Sbjct: 559 AEKLLREMIARGVRPRQ 575



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 201/381 (52%), Gaps = 1/381 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  AFL  +++V+ G   D +    L++ LCK  + + A+ +++ +  + + P+   Y 
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ +CK   V  A  L  +M   G   + VTY++L+ G C+LG LN ++   +++I +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+ +T++ L+ A  K+  +     + D ++ +G KPN V+YN L+ G C      +A
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +   G  P++ SY+I++   C   +++EA  L  EM   +  P +VTY+ LI  
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L+  G+  +AL+++D+M      P+  +YN I+  LC   +VD  +  L ++  +  +PN
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ L   LC  GK+++A  + + L  K ++   + Y  +I   C +G   +A  LL 
Sbjct: 470 MYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLS 529

Query: 437 EMTKYGFTPDSYTYSSLIRGL 457
           +M   G  PD+ TY  +I  L
Sbjct: 530 KMEDNGCIPDAKTYEIIILSL 550



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 146/267 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+ +     + M+ +G KP+ V   +L+   C   ++ KA  +   M   G+ PD  
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY+ ++N  CK      AM L ++M       + VTY+SL+ GL   G ++ +LQ +D++
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+ P   TY+ +L+A  K   V  A+ LL  +  KG +PN+ +Y++L+ GLC+ G+ 
Sbjct: 427 HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKL 486

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A + F  L  KG   NV +Y I+++  C+EG + EA  LL++M+     P   TY I+
Sbjct: 487 EDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRP 341
           I SL    + D A K+L EM+    RP
Sbjct: 547 ILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 35/335 (10%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N+AF     M+SKG  PDVV  + L+   C   K+  AI +   M+   I PD  ++  
Sbjct: 241 VNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNI 300

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LVN  CK G +     + + M   G   N VTYNSL+ G C++  +N++    + + Q G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 199 -----------------------------------LVPNAFTYSFLLEAAYKERGVHAAM 223
                                              ++P+  TYS L++   K   +  A+
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L+D +  +G  P + +YN +L  LCK  + ++AI     L  KG +PN+ +Y+IL++ L
Sbjct: 421 QLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGL 480

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G+ E+A ++   +     +  + TY I+I      G  + AL +L +M      P A
Sbjct: 481 CQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDA 540

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
            +Y  II  L  + + D+  K L +M  R  +P +
Sbjct: 541 KTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 104/198 (52%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A    + M  K   PDVV  ++L+  L K+ ++  A+++++ M   G+ P   +Y 
Sbjct: 380 KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYN 439

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A+ L+ K++D G   N  TY+ L++GLC  G L  + +  + L+ K
Sbjct: 440 SILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVK 499

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   N  TY+ +++    E   + A+ LL  +   G  P+  +Y +++  L K+   + A
Sbjct: 500 GHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559

Query: 258 IRFFRDLPSKGFEPNVVS 275
            +  R++ ++G  P  ++
Sbjct: 560 EKLLREMIARGVRPRQIA 577



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 94/170 (55%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +++ A   +++M  +G  P +    ++L  LCK +++ KAI ++  +   GI 
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQ 467

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L+  LC+ G +  A ++ E +   G+  N  TY  +++G C+ G  N++L  
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALAL 527

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           L ++   G +P+A TY  ++ + +K+     A KLL ++IA+G +P  ++
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 10/190 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + H+++ A   L ++  KG +P++   + L+  LC++ K++ A KV E ++  G  
Sbjct: 443 DALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHN 502

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  +YT ++   C +G    A+ L+ KMED G   +  TY  ++  L      + + + 
Sbjct: 503 LNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKL 562

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYK---------ERGVHAAMKLLDDIIAKGGKPNLVSY 241
           L  +I +G+ P      F  +  Y          E+ V     +   +I  G + N V +
Sbjct: 563 LREMIARGVRPRQIAIWFQKKKEYDVSSEPKTLTEQSVPKFKAMFGLVICDGMEWNGVVH 622

Query: 242 NVL-LTGLCK 250
           N + L G  K
Sbjct: 623 NYIPLFGFAK 632


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 225/456 (49%), Gaps = 8/456 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G +P +V    LL  LC   K+  A+K+ + MV  G  PD  +Y+ ++N LCK GN
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+QL++KME+ G   N V YN+++  LC    + +++ F   ++++G+ P+ FTYS 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L        V+ A  L   ++ +   PN V++ +L+ GLCK+    EA   F  +  KG
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            EP+V +YN L+   C   + +EA +L   MD    +P + +YNILI      G+ D A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAML 387
            +L EM      P   +Y+ ++   C  G+     + L +M      PN  TY+  L  L
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G + EAF +++++   +       Y  +I  +C  GK   A +L   +   G  P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ +I GL   GL  EA E+F  M      P+   +N ++ G  ++  T  ++ + + 
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M+ KG   + +T+ +L        +LE S E++ + 
Sbjct: 421 MVGKGFSADSSTFRML-------SDLESSDEIISQF 449



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 207/412 (50%), Gaps = 1/412 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ DA    + MV  GH+PDV+  + ++  LCK      A+++++ M   G  P+  +Y 
Sbjct: 25  KIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYN 84

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  AM    +M   G P +  TY+S++ G C LG +N++     +++++
Sbjct: 85  TIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVER 144

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++PN  T++ L++   K+R +  A  + + +  KG +P++ +YN L+ G C   + +EA
Sbjct: 145 NVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEA 204

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F  +  KG  PNV SYNIL+   C  GR +EA  LLAEM     +P I TY+ L+  
Sbjct: 205 QKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRG 264

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+   A ++L EM      P+  +Y+ ++  LC  G +D   + L  M   + +PN
Sbjct: 265 FCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPN 324

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              Y  L   +C  GK++ A  +  +L  K        Y  +I+ L + G + +A +L  
Sbjct: 325 IFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFR 384

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
           EM   G  P+S TY+ +I+G    G    A+ +   M    +  D   F  L
Sbjct: 385 EMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 223/436 (51%), Gaps = 1/436 (0%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M   G+ P   ++  L++ LC K  +  A++L ++M   G+  + +TY++++ GLC +GN
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
              +LQ L ++ +KG  PN   Y+ ++++  K+R V  AM    +++ +G  P++ +Y+ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           +L G C  GR  EA   F+ +  +   PN V++ IL+  LC +    EA  +   M    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P + TYN L+       + D A K+ + M +    P+  SYN +I   C  G++D   
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
             L +M H+   P+  TY+ L    C VG+ QEA  +++ + +         Y  V+  L
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ G   +AF+LL  M +    P+ + Y+ LI G+C  G +E A E+F  +     +P V
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +  ++ GL K   ++ + E+F+ M   G +PN  TY ++++G     +   +  +++E
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 543 LQLRQVVSESAVERLV 558
           +  +   ++S+  R++
Sbjct: 421 MVGKGFSADSSTFRML 436



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 201/403 (49%), Gaps = 1/403 (0%)

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M   G     VT+N+L+ GLC    +  +++  D +++ G  P+  TYS ++    K   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
              A++LL  +  KG KPN+V+YN ++  LCK+    EA+ FF ++  +G  P+V +Y+ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           +L   C  GR  EA  L  +M   +  P  VT+ ILI  L        A  V + M +  
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
             P   +YN ++   CS  ++D   K  + M  + C PN  +YN L    C  G++ EA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            ++  + +K  +     Y  ++   C+ G+  +A +LL EM  YG  P+  TYS ++ GL
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G ++EA E+   M+E   +P++  +  L+ G+C   + + + E+F  +  KG  P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            TYT+++ G+        + E+ +E+ +   +  S    +++Q
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQ 403



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 181/394 (45%), Gaps = 35/394 (8%)

Query: 61  KPNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK 119
           KPN    N   D+  +D  + +A      MV +G  PDV   +++L+  C   ++ +A  
Sbjct: 77  KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATS 136

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
           + + MV   +IP+  ++T L++ LCKK  +  A  + E M + G   +  TYN+LV G C
Sbjct: 137 LFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYC 196

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
               ++++ +  + + +KG  PN  +Y+ L+    K   +  A  LL ++  K   P++ 
Sbjct: 197 SRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIF 256

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +Y+ L+ G C+ GR +EA    +++ S G  PN+++Y+I+L  LC  G  +EA ELL  M
Sbjct: 257 TYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAM 316

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P I  Y ILI  +   GK + A ++   +     +P+  +Y  +I+ L   G  
Sbjct: 317 QESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLS 376

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
           +   +   +M    C PN  TYN                                   +I
Sbjct: 377 NEACELFREMAVNGCLPNSCTYN----------------------------------VII 402

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
               R G T  A +L+ EM   GF+ DS T+  L
Sbjct: 403 QGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 155/310 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++N+A    ++MV +   P+ V  T L+  LCK   + +A  V E M   G+ PD  +Y 
Sbjct: 130 RVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYN 189

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV+  C +  +  A +L   M+  G   N  +YN L+ G C  G ++++   L  +  K
Sbjct: 190 ALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK 249

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L P+ FTYS L+    +      A +LL ++ + G  PNL++Y+++L GLCK G  +EA
Sbjct: 250 SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEA 309

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + +     EPN+  Y IL+  +C  G+ E A EL + +      PT+VTY ++I  
Sbjct: 310 FELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISG 369

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G ++ A ++  EM      P++ +YN II      G     V+ +++M  +    +
Sbjct: 370 LLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSAD 429

Query: 378 EGTYNGLAML 387
             T+  L+ L
Sbjct: 430 SSTFRMLSDL 439


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 231/462 (50%), Gaps = 1/462 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M  +G KP+ V    L+   C+   +  A  V+  ++  G  PD  +    +   C 
Sbjct: 93  FQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCL 152

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG +  A+   +K+   G+  + V+Y +L+ GLC +G    +L+ L R+  K +  +   
Sbjct: 153 KGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 212

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS ++++  K++ V+ A  L  +++++    N+V+Y+ L++G C  G+ ++AI  F  + 
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S+   P+V ++NIL+ + C EGR +EA   LA M      P IVTYN L+       + +
Sbjct: 273 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVN 332

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L+ M       +  SYN +I   C    VD  +K   +M H++  PN  TYN L 
Sbjct: 333 MAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLI 392

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  G++  A  +I  + ++        Y  ++ +LC+     +A  LL ++   G  
Sbjct: 393 DGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIR 452

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+ YTY+ LI GLC  G +E+A  IF  +    Y   V+ +  ++ G C     D +L +
Sbjct: 453 PNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSL 512

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
              M +   +P+  TY I++  +  +DE + + ++L+E+  R
Sbjct: 513 LSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITR 554



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 197/416 (47%), Gaps = 34/416 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ ++ +A   L  M+ +G KPD+V   +L+   C  N++  A  ++  M   G+ 
Sbjct: 288 DAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVT 347

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
               SY  ++N  CK   V  AM+L ++M       N +TYNSL+ GLC  G ++ +L+ 
Sbjct: 348 ATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL 407

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +  +G  P+  TYS +L+A  K   V  A+ LL  +  +G +PN+ +Y +L+ GLCK
Sbjct: 408 IDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCK 467

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR E+A   F DL  KG+   V +Y ++++  C  G ++EA  LL++M      P  +T
Sbjct: 468 GGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAIT 527

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y I+I SL    + D A K+L EM+      S   Y          G   L        F
Sbjct: 528 YEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEY----------GSWSLSFMAAPAHF 577

Query: 371 ----HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS-LGNKQNSSPQEFYKYVITSLCRK 425
                 +C  ++ + N   +L  + ++     + +S + +K    P      +I S C  
Sbjct: 578 LNNDSLQCTSSQESGNWAKLL--LERIYCDCVLTKSNMRDKDVECPS----VIIYSTC-- 629

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
                      + +K G+  D  TY+ +I+G C  GL +E+L +   ME     PD
Sbjct: 630 -----------DWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPD 674



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 229/513 (44%), Gaps = 46/513 (8%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +++V+ G   D V    L+  LCK  + + A++++  +    +  D   Y+ +++ +CK 
Sbjct: 164 DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKD 223

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            NV  A  L  +M      +N VTY++L+ G C++G L  ++   +++  + + P+ +T+
Sbjct: 224 KNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTF 283

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L++A  KE  V  A   L  ++ +G KP++V+YN L+ G C       A      +  
Sbjct: 284 NILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSH 343

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G    V SYNI++   C     ++A +L  EM      P ++TYN LI  L   G+  +
Sbjct: 344 RGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISY 403

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           AL+++D M     +P   +Y+ I+  LC    VD  +  L ++  +  +PN  TY  L  
Sbjct: 404 ALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILID 463

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G++++A  I + L  K  +     Y  +I   C  G   +A  LL +M      P
Sbjct: 464 GLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIP 523

Query: 446 DSYTYS----------------SLIRGLCMEGLIEEALEIFVVMEEYDYKP--------- 480
           D+ TY                  L+R +   GL+   LE       +   P         
Sbjct: 524 DAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSL 583

Query: 481 ------DVDNFNALLLG-------LCKSRRTDLSLEVFQMMI-------EKGQMPNETTY 520
                 +  N+  LLL        L KS   D  +E   ++I       ++G + +  TY
Sbjct: 584 QCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTY 643

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           T++++G       + S  +L ++++   + ++ 
Sbjct: 644 TVMIQGFCSHGLFDESLALLSKMEVNGCIPDAV 676



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/252 (20%), Positives = 106/252 (42%), Gaps = 45/252 (17%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H ++ A   L ++  +G +P++   T L+  LCK  +++ A  + E ++  G  
Sbjct: 428 DALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYN 487

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
              ++YT ++   C  G    A+ L+ KM+D     + +TY  ++  L      +++ + 
Sbjct: 488 LTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKL 547

Query: 191 LDRLIQKGLVPNAFTY-----SFLLEAAY------------KERGVHAAMKL----LDDI 229
           L  +I +GL+ +   Y     SF+   A+            +E G  A + L     D +
Sbjct: 548 LREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCV 607

Query: 230 IAKGGK-------PNLV-----------------SYNVLLTGLCKEGRTEEAIRFFRDLP 265
           + K          P+++                 +Y V++ G C  G  +E++     + 
Sbjct: 608 LTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKME 667

Query: 266 SKGFEPNVVSYN 277
             G  P+ V+Y+
Sbjct: 668 VNGCIPDAVTYD 679


>gi|242034189|ref|XP_002464489.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
 gi|241918343|gb|EER91487.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
          Length = 585

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 235/499 (47%), Gaps = 41/499 (8%)

Query: 55  KDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKM 114
           K   Y    R+  NN        KL  A   ++ MV  G  PD      L+  L +  K 
Sbjct: 122 KAECYADSLRRHCNNG-------KLIQACRVIDEMVLHGQVPDSKCCVRLIRGLVRTGKT 174

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
            KA  V+E+MV SG +PD  +   L+  LC +G +  AM+++E M   G   + +T+N+L
Sbjct: 175 NKARHVLEVMVLSGGVPDTITCNMLIARLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTL 234

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +R +C     ++++ F    ++ G  P   T + L++   K+ G   A+++LD++  +G 
Sbjct: 235 IRCMCSHHMYDRAISFWKEQLKLGWPPYEMTSTLLVDLICKKCGPMRALEVLDELGLEGC 294

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P++VSYN L++  CK G  + A      L ++G EPN  +Y ILL SLC + RW E  +
Sbjct: 295 QPDVVSYNTLISVSCKAGCLKNAKLILTHLSAEGLEPNGTTYCILLHSLCDKRRWSEVGD 354

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           LLA M   +  P +  YNI I     +G  D A+ VL+ MV  +  P   +YN +     
Sbjct: 355 LLAHMKQANHKPDVTAYNIFINYFCRYGYLDQAIDVLEVMVNEKCFPDIVTYNTL----- 409

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
                      L+ +  R                  G V+EA  I  S+        +  
Sbjct: 410 -----------LNAISKR------------------GMVEEALGIFHSIRENGCQVVRIT 440

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I +L +KG+   A  L  EMT  G +PD  TY SL+ G C + + +EALE+   M 
Sbjct: 441 YNTLIDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSLVMGFCKKNMAKEALELLNQML 500

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
              ++     F+ ++  LCK   T+ + E+ ++M+ +        Y  +V  +A    ++
Sbjct: 501 ALGFEVKATTFSMMIQSLCKGCNTEAAAEILRVMVSRNVNHRSAFYLSIVTRVAKSGRVK 560

Query: 535 LSAEVLKELQLRQVVSESA 553
            +  + +EL   +V+ E++
Sbjct: 561 EAQILHQELVQSKVLKEAS 579



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 130/268 (48%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A L L  + ++G +P+      LL+ LC   +  +   ++  M  +   PD ++Y  
Sbjct: 314 LKNAKLILTHLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVTAYNI 373

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            +N  C+ G +  A+ ++E M +     + VTYN+L+  +   G + ++L     + + G
Sbjct: 374 FINYFCRYGYLDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVEEALGIFHSIRENG 433

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
                 TY+ L++A  K+  V  AM L D++   G  P+ V+Y  L+ G CK+   +EA+
Sbjct: 434 CQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSLVMGFCKKNMAKEAL 493

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                + + GFE    +++++++SLC     E A E+L  M   + +     Y  ++  +
Sbjct: 494 ELLNQMLALGFEVKATTFSMMIQSLCKGCNTEAAAEILRVMVSRNVNHRSAFYLSIVTRV 553

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASY 346
           A  G+   A  +  E+V+ +    A+ +
Sbjct: 554 AKSGRVKEAQILHQELVQSKVLKEASQF 581


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 220/451 (48%), Gaps = 15/451 (3%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF     M+     P +   T+LL  L K     +   +   M  SGI PD  +   L+N
Sbjct: 80  AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
           CLC    VG  + ++  +   GY  + VTY +L++GLCM   ++++     R+ + G  P
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KPNLVSYNVLLTGLCKEGRTE 255
           NA TY  L++   +   +  A+KL  +++          KP ++SY++++  LCK+ R +
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA   F ++  +G  P V+SY  L+        WEEA  L  EM      P +VT+N+LI
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLI 311

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   GK   A  +L+ M++    P+  +YN +I   C  G ++   +    M  + C+
Sbjct: 312 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 371

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+   Y  L    C   KV+EA  +   +         + Y  ++T L + GK   A +L
Sbjct: 372 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M  YG   D Y Y   + GLC  G + EA+E+F  ++ Y+ K D++ FN L+ GLCK
Sbjct: 432 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 491

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           + + + + E+F+ + ++   P+  TY I++ 
Sbjct: 492 AGKLETAWELFEKLPQEELQPDVVTYNIMIH 522



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 234/491 (47%), Gaps = 29/491 (5%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +  F    +M   G  PD      LL  LC  N++ + + VM  ++  G IPD  +YT L
Sbjct: 113 SQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTL 172

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LC +  +  A  L  +M+  G   N +TY +L++GLC  GN++ +L+    ++    
Sbjct: 173 IKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSS 232

Query: 200 V------PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +      P   +YS +++A  K+R    A  L +++  +G  P ++SY  L+        
Sbjct: 233 LYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW------- 285

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA R F ++ ++G +PNVV++N+L+  LC EG+  EA +LL  M      P ++TYN 
Sbjct: 286 -EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNS 344

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + A ++   M      P    Y  +I   C   KV+  +K  + M    
Sbjct: 345 LIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 404

Query: 374 CKPNEGTYNGLAMLCG------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVI--TSLCRK 425
            +P+  TY   A+L G      VG  ++ F +++  G      P + Y Y I    LC+ 
Sbjct: 405 KRPDVKTYG--ALLTGLFQGGKVGDAKKLFGVMKVYG-----IPGDLYIYGIFLNGLCKN 457

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G  ++A +L  ++  Y    D   ++ LI GLC  G +E A E+F  + + + +PDV  +
Sbjct: 458 GCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 517

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           N ++   C+  +   +  +FQ M + G  P++ TY  L+ G     +LE   E+L  +  
Sbjct: 518 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 577

Query: 546 RQVVSESAVER 556
           R V  +  + R
Sbjct: 578 RDVSLDVNILR 588



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 15/357 (4%)

Query: 179 CMLGNLN--QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           C  GN+   Q+ QF   ++     P   +++ LL    K +       L + +   G  P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +  + N+LL  LC   R  E +     +  +G+ P++V+Y  L++ LCME R  +A  L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG------RFRPSAASYNPII 350
             M     +P  +TY  L+  L   G    ALK+  EM+         F+P   SY+ II
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS 410
             LC + + D      ++M  +   P   +Y  L         +EA  +   + N+    
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW-------EEAKRLFNEMVNQGVQP 302

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               +  +I  LC++GK  +A  LL  M + G  P+  TY+SLI G C+ G +  A E+F
Sbjct: 303 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 362

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           V M     +PDV  +  L+ G CK+ + + +++++  M++ G+ P+  TY  L+ G+
Sbjct: 363 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGL 419



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 156/314 (49%), Gaps = 8/314 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D + ++A    E M  +G  P V+  T+L+++        +A ++   MV+ G+ 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWE--------EAKRLFNEMVNQGVQ 301

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L++ LCK+G V  A  L+E M   G   N +TYNSL+ G C++G+LN + + 
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  P+   Y+ L+    K   V  AMKL + ++  G +P++ +Y  LLTGL +
Sbjct: 362 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 421

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  +A + F  +   G   ++  Y I L  LC  G   EA EL  ++   +    I  
Sbjct: 422 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 481

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +N LI  L   GK + A ++ +++ +   +P   +YN +I   C  G+V        +M 
Sbjct: 482 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 541

Query: 371 HRRCKPNEGTYNGL 384
              C P++ TY  L
Sbjct: 542 KNGCTPDKITYATL 555



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 195/441 (44%), Gaps = 67/441 (15%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII----- 130
           +H+++ A L   RM   G  P+ +    L+  LC+   +  A+K+ + M++   +     
Sbjct: 179 EHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINF 238

Query: 131 -PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY-PT---------------------- 166
            P   SY+ +++ LCK      A  L E+M+  G  PT                      
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQ 298

Query: 167 ----NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
               N VT+N L+  LC  G + ++   L+ +IQ+G+VPN  TY+ L+E       +++A
Sbjct: 299 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSA 358

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            +L   + +KG +P+++ Y VL+ G CK  + EEA++ +  +   G  P+V +Y  LL  
Sbjct: 359 RELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTG 418

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           L   G+  +A +L   M        +  Y I +  L  +G    A+++ +++     +  
Sbjct: 419 LFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLD 478

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
              +N +I  LC  GK++   +  +++     +P+  TYN                    
Sbjct: 479 IECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYN-------------------- 518

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
                          +I   CR G+  +A  L  +M K G TPD  TY++LIRG      
Sbjct: 519 --------------IMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKK 564

Query: 463 IEEALEIFVVMEEYDYKPDVD 483
           +E+ +E+  +M + D   DV+
Sbjct: 565 LEKVVELLHMMVQRDVSLDVN 585



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 128/266 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   LE M+ +G  P+++   +L+   C    +  A ++   M S G  
Sbjct: 312 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 371

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   YT L+N  CK   V  AM+L   M   G   +  TY +L+ GL   G +  + + 
Sbjct: 372 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G+  + + Y   L    K   +  AM+L + + +   K ++  +N L+ GLCK
Sbjct: 432 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 491

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E A   F  LP +  +P+VV+YNI++   C  G+  +AN L  +M+    +P  +T
Sbjct: 492 AGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKIT 551

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVK 336
           Y  LI       K +  +++L  MV+
Sbjct: 552 YATLIRGFFESKKLEKVVELLHMMVQ 577


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 236/509 (46%), Gaps = 38/509 (7%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H DH  NDA     RM+     P   Q  N+L  L K  +   AI + + +   GI  D 
Sbjct: 47  HNDH--NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDL 104

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +   L+NC C  G +  +  ++  +   GY  + +T  +L++GLC+ G + ++L+F D 
Sbjct: 105 VTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDD 164

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++      +  +Y  L+    K     AA++L+ ++  +  KP++V YN+++  LCK   
Sbjct: 165 VVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKL 224

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA   + ++ +K   PNVV+Y  L+   C+ G   EA  LL EM   + +P + T++I
Sbjct: 225 VGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSI 284

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI------------------------ 349
           LI +L   GK   A  VL  M+K   +P   +YN +                        
Sbjct: 285 LIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSG 344

Query: 350 -----------IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
                      I  LC    VD  +   ++M H+   PN  T+N L   LC  G++   +
Sbjct: 345 VTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVW 404

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            ++  + ++   +    Y  +I +LC+     QA  L  +M      PD YTY+ LI GL
Sbjct: 405 DLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGL 464

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G ++ A E+F  +    Y  D+  +  ++ G CK+   D +L +   M + G +PN 
Sbjct: 465 CKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNA 524

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLR 546
            T+ I++  +  +DE + + ++L+E+  R
Sbjct: 525 ITFDIIICALFEKDENDKAEKLLREMIAR 553



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 143/265 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+  A + L  M+    KPDVV   +L+      N++K A  V   M  SG+ 
Sbjct: 287 DALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVT 346

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   SYT +++ LCK   V  A+ L E+M+      NT+T+NSL+ GLC  G +      
Sbjct: 347 PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDL 406

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D++  +  + +  TYS L++A  K   +  A+ L   +I +  +P++ +Y +L+ GLCK
Sbjct: 407 VDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCK 466

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR + A   F+ L  KG+  ++ +Y +++   C  G ++EA  LL++M+     P  +T
Sbjct: 467 GGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAIT 526

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           ++I+I +L    + D A K+L EM+
Sbjct: 527 FDIIICALFEKDENDKAEKLLREMI 551



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 181/376 (48%), Gaps = 7/376 (1%)

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           N ++   +R++     P  F ++ +L +  K +    A+ L   +  KG   +LV+ N+L
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           +   C  G+   +      +  +G+ P+V++   L++ LC+ G  ++A +   ++   + 
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
               ++Y  LI  L   G+T  A++++  + +   +P    YN II  LC    V     
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 365 CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSL 422
              +M  ++  PN  TY  L    C +G + EA A++  +  K N +P  + +  +I +L
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLK-NINPDVYTFSILIDAL 289

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
            ++GK   A  +L  M K    PD  TY+SL+ G  +   ++ A  +F  M +    P V
Sbjct: 290 GKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGV 349

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            ++  ++ GLCK++  D ++ +F+ M  K  +PN  T+  L++G+     +    +++ +
Sbjct: 350 QSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDK 409

Query: 543 L----QLRQVVSESAV 554
           +    QL  V++ S++
Sbjct: 410 MRDRSQLADVITYSSL 425



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 83/148 (56%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +++M  +    DV+  ++L+  LCK   + +AI + + M++  I PD  +YT L++ LCK
Sbjct: 407 VDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCK 466

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A ++ + +   GY  +  TY  ++ G C  G  +++L  L ++   G +PNA T
Sbjct: 467 GGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAIT 526

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           +  ++ A +++     A KLL ++IA+G
Sbjct: 527 FDIIICALFEKDENDKAEKLLREMIARG 554



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 93/191 (48%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A    E M  K   P+ +   +L+  LCK+ ++     +++ M     + D  +Y+ 
Sbjct: 365 VDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSS 424

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ LCK  ++  A+ L +KM       +  TY  L+ GLC  G L  + +    L+ KG
Sbjct: 425 LIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKG 484

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              +  TY+ ++    K      A+ LL  +   G  PN +++++++  L ++   ++A 
Sbjct: 485 YHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAE 544

Query: 259 RFFRDLPSKGF 269
           +  R++ ++G 
Sbjct: 545 KLLREMIARGL 555



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 70/130 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L+ A    ++M+++  +PD+   T L+  LCK  ++K A +V + ++  G  
Sbjct: 427 DALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYH 486

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +YT +++  CK G    A+ L+ KMED G   N +T++ ++  L      +++ + 
Sbjct: 487 LDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKL 546

Query: 191 LDRLIQKGLV 200
           L  +I +GL+
Sbjct: 547 LREMIARGLL 556


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 240/483 (49%), Gaps = 15/483 (3%)

Query: 86  LERMVSKGH--KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L+ MV++G   +P+ +    L+    + NK   A  +     S    P   ++T L++ L
Sbjct: 18  LKEMVAEGRPLRPNTL--VKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDIL 75

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
              G    A  + +K+   G   +   YN L+R     G L+ +++    +  KG  P+ 
Sbjct: 76  VNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDE 135

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           +TY FL+ A  K   V  A    D ++ +G  PN+ +YN+L+    K G+ + A+  F +
Sbjct: 136 YTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAE 195

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  +GF+P+VV+YNILL +LC  GR   A +L  +M G   SP   TY+ L+  L   G+
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGR 255

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            + A KV  EMV         +YN ++A L   G +D V K + +M  +   P+  ++N 
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFN- 314

Query: 384 LAMLCGVGK------VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             ++  +GK       +E FA +   G K +      Y  +I S  R G   QA Q+L E
Sbjct: 315 -TIMDALGKANKPDAAREVFARMVESGCKPDLIS---YNILIDSYARFGDAAQARQMLEE 370

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + GF P++ TY+SLI  L  +G ++EA  +   ME    +PDV  +N L+  L K   
Sbjct: 371 MVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE 430

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +  +FQ M +KG  P+  +Y + ++G+A  D L+ +  + K+++      + A+ R+
Sbjct: 431 NQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRI 490

Query: 558 VMQ 560
           +++
Sbjct: 491 LIR 493



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 209/447 (46%), Gaps = 37/447 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+ A      M  KG +PD      L+  L KA ++++A    + M+  G+ P+  
Sbjct: 112 RSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIP 171

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++   K G +  A+ L  +M+  G+  + VTYN L+  LC  G +  + +   ++
Sbjct: 172 TYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKM 231

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G  P+++TYS L+    K   V  A K+  +++ +G   +LV+YN LL  L K G  
Sbjct: 232 TGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNM 291

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +   +  +++  KGF P+  S+N ++ +L    + + A E+ A M      P +++YNIL
Sbjct: 292 DRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNIL 351

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I S A  G    A ++L+EMV+  F P   +YN +I  L ++G+VD     L++M    C
Sbjct: 352 IDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGC 411

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           +P+  TYN L  + G                                  ++G+  +A +L
Sbjct: 412 RPDVVTYNRLMDMLG----------------------------------KRGENQRAARL 437

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M   G  PD+ +Y+  I GL  +  ++EAL +F  M+      D   +  L+     
Sbjct: 438 FQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI--RAA 495

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYT 521
            R  D  LE  Q+  E   MP E+  T
Sbjct: 496 HRAGDTELEA-QLKHESQFMPVESRLT 521


>gi|357441367|ref|XP_003590961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480009|gb|AES61212.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 573

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 222/453 (49%), Gaps = 34/453 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A   +E M      P     TNL+  L +  ++ K  K+M MMV SG +PD  ++ 
Sbjct: 125 KLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFN 184

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK+G++  A++ +E M   G   +  TYN+++R +   G+ N ++ F    ++K
Sbjct: 185 AVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRK 244

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   TY+ L+E   K  G   A+++L+D+  +G  P++  YN L+    K+G  ++ 
Sbjct: 245 GFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDT 304

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                +L S G +PNVV+YNIL+ SL + G  +  +++L  M+    SPT+VTYNIL+ S
Sbjct: 305 ALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNS 364

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  D ++ +  +MV     P   +YN ++  LC EG +D  ++ L  +    C P 
Sbjct: 365 LCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPG 424

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN                                   VI  L R      A ++  E
Sbjct: 425 LVTYN----------------------------------IVINGLARMRSIKSAKEMYGE 450

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + G  PD  T+ +L+ GLC     EEA+EIF VM     K     +  ++LGLC+ ++
Sbjct: 451 MVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKK 510

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            D +++   +M++    P+   Y  L++ +A++
Sbjct: 511 LDSAIQALDLMVKAQCKPDGKIYYTLLKSVANE 543



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 209/442 (47%), Gaps = 34/442 (7%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           + +  +L  LC   K+  A +++E+M     IP   S T L+  L + G V    +++  
Sbjct: 111 LTSNKILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNM 170

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M   G   +T+T+N+++  LC  G+L  +L+FL+ +   G +P+A TY+ ++   + +  
Sbjct: 171 MVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGD 230

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
            + A+    D + KG  P L++Y +L+  +CK      A+    D+  +G  P++  YN 
Sbjct: 231 PNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNS 290

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+     +G +++   +++ +      P +VTYNILI SL+ HG +D    +L  M +  
Sbjct: 291 LVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETS 350

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFA 398
             P+  +YN ++  LC  G +D  +    +M    C P+  TYN L              
Sbjct: 351 ISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTL-------------- 396

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
                               + +LC++G   ++ QLL+ ++    +P   TY+ +I GL 
Sbjct: 397 --------------------LNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLA 436

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
               I+ A E++  M E    PD      L+ GLC+  + + ++E+F++M   GQ     
Sbjct: 437 RMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGY 496

Query: 519 TYTILVEGIAHQDELELSAEVL 540
            Y  ++ G+  Q +L+ + + L
Sbjct: 497 AYKCVILGLCEQKKLDSAIQAL 518



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 183/402 (45%), Gaps = 34/402 (8%)

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LC +G +  A +LVE M       +  +  +L+RGL  +G +++  + ++ ++  G VP+
Sbjct: 120 LCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPD 179

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             T++ ++ +  K   + +A++ L+ +   G  P+  +YN ++  +  +G    A+ F++
Sbjct: 180 TITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWK 239

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           D   KGF P +++Y +L+  +C       A E+L +M      P I  YN L+   +  G
Sbjct: 240 DQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQG 299

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
                  V+  ++    +P+  +YN +I  L   G  D+V   L  M      P   TYN
Sbjct: 300 NYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYN 359

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L                                  + SLC+ G   ++  L  +M    
Sbjct: 360 IL----------------------------------LNSLCKSGFLDRSISLYIKMVSEN 385

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            +PD  TY++L+  LC EG I+E++++   +   +  P +  +N ++ GL + R    + 
Sbjct: 386 CSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAK 445

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           E++  M+EKG  P+  T+  LV G+    + E + E+ K + 
Sbjct: 446 EMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKVMH 487



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/401 (20%), Positives = 167/401 (41%), Gaps = 39/401 (9%)

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           +T N +++ LC  G L  + + ++ + +   +P+  + + L+    +   V    K+++ 
Sbjct: 111 LTSNKILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNM 170

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           ++  GG P+ +++N ++  LCK G  + A+ F   +   G  P+  +YN ++R +  +G 
Sbjct: 171 MVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGD 230

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
              A     +       P ++TY +L+  +  H     AL+VL++M +    P    YN 
Sbjct: 231 PNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNS 290

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN 408
           ++     +G        +  +     +PN  TYN L                        
Sbjct: 291 LVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNIL------------------------ 326

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                     I SL   G +     +L  M +   +P   TY+ L+  LC  G ++ ++ 
Sbjct: 327 ----------IHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSIS 376

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +++ M   +  PD+  +N LL  LCK    D S+++   +      P   TY I++ G+A
Sbjct: 377 LYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLA 436

Query: 529 HQDELELSAEVLKELQLRQVVSESAVER-----LVMQYDFE 564
               ++ + E+  E+  + +  +    R     L   Y FE
Sbjct: 437 RMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFE 477


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 216/410 (52%), Gaps = 7/410 (1%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +++  ++  LC  G    A++L+ +M       N VTYN+++ G C  G +  +L  +  
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 210

Query: 194 LIQKG-LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKE 251
           + ++G + PN +TY  ++    K   V  A+K+ D+++ KG  KP  V YN L+ G C +
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ + A+ +   +  +G    V +YN+L+ +L M+GR  EA EL+ EM G   +  + TY
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI      G    AL++ + M +   R +  +Y  +I  L  +G+V    K  D+   
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 372 RRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R  +P+   YN L       G +  AF I+  +  K+ +     Y  ++  LC  G+  +
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L+ EMTK G  PD  TY++LI G  M+G +++AL I   M    + P +  +NAL+ 
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           GLCK+ + D +  + + M+E G  P+++TY  L+EG+  +DE  +  E L
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERL 560



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 195/392 (49%), Gaps = 7/392 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDY 162
           +L  LC A K  +A++++  M      P+A +Y  ++   C +G V  A+ ++ +M E  
Sbjct: 160 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 215

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHA 221
           G   N  TY +++ G C +G ++++++  D ++ KG V P A  Y+ L+     +  +  
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+   D ++ +G    + +YN+L+  L  +GR  EA     ++  KG   +V +YNIL+ 
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C EG  ++A E+   M       T+VTY  LI +L+  G+     K+ DE V+   RP
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
               YN +I    + G +D   + + +M  +R  P++ TYN L   LC +G+V EA  +I
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +  +        Y  +I+    KG    A ++  EM   GF P   TY++LI+GLC  
Sbjct: 456 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 515

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           G  ++A  +   M E    PD   + +L+ GL
Sbjct: 516 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 1/308 (0%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++++A    + M++KG  KP+ V    L+   C   K+  A+   + MV  G+    ++Y
Sbjct: 236 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 295

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             LV+ L   G    A +LVE+M   G   +  TYN L+ G C  GN+ ++L+  + + +
Sbjct: 296 NLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSR 355

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+     TY+ L+ A  K+  V    KL D+ + +G +P+LV YN L+      G  + 
Sbjct: 356 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 415

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++  K   P+ V+YN L+R LC+ GR +EA +L+ EM      P +VTYN LI 
Sbjct: 416 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 475

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             +  G    AL++ +EM+   F P+  +YN +I  LC  G+ D     + +M      P
Sbjct: 476 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 535

Query: 377 NEGTYNGL 384
           ++ TY  L
Sbjct: 536 DDSTYISL 543



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 155/313 (49%), Gaps = 7/313 (2%)

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            ++N++L  LC  G+   A+   R +P     PN V+YN ++   C  GR + A +++ E
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 210

Query: 299 M-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSE 356
           M + G  +P   TY  +I      G+ D A+KV DEM+ KG  +P A  YN +I   C +
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           GK+D  +   D+M  R       TYN L   L   G+  EA+ +++ +G K  +     Y
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I   C++G   +A ++   M++ G      TY+SLI  L  +G ++E  ++F     
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              +PD+  +NAL+     S   D + E+   M +K   P++ TY  L+ G+     ++ 
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 536 SAEVLKELQLRQV 548
           + +++ E+  R +
Sbjct: 451 ARKLIDEMTKRGI 463



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 149/279 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A L  +RMV +G    V     L++ L    +  +A +++E M   G+  D  +Y 
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK+GNV  A+++ E M   G     VTY SL+  L   G + ++ +  D  +++
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 391

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   Y+ L+ +      +  A +++ ++  K   P+ V+YN L+ GLC  GR +EA
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +   ++  +G +P++V+YN L+    M+G  ++A  +  EM     +PT++TYN LI  
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           L  +G+ D A  ++ EMV+    P  ++Y  +I  L +E
Sbjct: 512 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 120/217 (55%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E M  +G +  VV  T+L+Y L K  ++++  K+ +  V  GI PD   Y  L+N    
Sbjct: 350 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 409

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A +++ +ME      + VTYN+L+RGLC+LG ++++ + +D + ++G+ P+  T
Sbjct: 410 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 469

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+     +  V  A+++ ++++ KG  P L++YN L+ GLCK G+ ++A    +++ 
Sbjct: 470 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 529

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
             G  P+  +Y  L+  L  E      +E LA  D  
Sbjct: 530 ENGITPDDSTYISLIEGLTTEDERAIDDERLAAADAA 566



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 130/243 (53%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D +  +A+  +E M  KG   DV     L+   CK   +KKA+++ E M   G+     +
Sbjct: 305 DGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 364

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L+  L KKG V    +L ++    G   + V YN+L+      GN++++ + +  + 
Sbjct: 365 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 424

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K + P+  TY+ L+        V  A KL+D++  +G +P+LV+YN L++G   +G  +
Sbjct: 425 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+R   ++ +KGF P +++YN L++ LC  G+ ++A  ++ EM     +P   TY  LI
Sbjct: 485 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544

Query: 316 GSL 318
             L
Sbjct: 545 EGL 547



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF L  +M +      + T++ ++R LC  G    ALE+   M     +P+   +N ++ 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 193

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           G C   R   +L++ + M E+G + PN+ TY  ++ G      ++ + +V  E+  +  V
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 550 SESAV 554
              AV
Sbjct: 254 KPEAV 258


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 226/457 (49%), Gaps = 1/457 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L+ A+   + M+ +G  P+ +    LL+  C + K K+AI +   M   G+ PD  
Sbjct: 218 REGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVV 277

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+  LCK G    A ++ + M   G+  ++  Y +L+ G    G L Q  Q LD +
Sbjct: 278 TYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVM 337

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+ + ++ L+ A  K   V  AM     +  +G  PN+V+Y  ++  LC+ G+ 
Sbjct: 338 VRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKV 397

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F  L S+G  PN V +  L+  LC   +W++A EL  EM G    P  + +N L
Sbjct: 398 DDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTL 457

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G    A  + D MV+   +    +Y  +I   C +GKVD   K L+ M     
Sbjct: 458 LNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGV 517

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPNE TYN +    C  G++++A ++ + + +K  +     Y  ++  L +  +   A +
Sbjct: 518 KPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKE 577

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   M K G      TY+ +++GLC     ++AL +F  +   D+      FN ++  L 
Sbjct: 578 LYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALL 637

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
           K  R D + ++F  ++ +G +PN  TY ++++ +  Q
Sbjct: 638 KGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 674



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 221/471 (46%), Gaps = 6/471 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGIIPDA 133
           R   L+ AF  L R++  G     +  + LL  LC   +   A+ + +  M + G  P+A
Sbjct: 108 RAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNA 167

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKM--EDY--GYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            SY  L+  LC +     A+ L+  M  +D   G P + V+Y +++ GL   G L+++  
Sbjct: 168 FSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYC 227

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             D ++ +G+ PN  TY+ LL           A+ +   +   G +P++V+YN L+  LC
Sbjct: 228 LFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLC 287

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K GR+ EA + F  +  KG +P+   Y  LL     EG   + ++LL  M      P   
Sbjct: 288 KNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHY 347

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            +NILIG+ A HG  D A+    +M +    P+  +Y  ++  LC  GKVD  +   D++
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                 PN   +  L   LC   K  +A  +   +  +       F+  ++  LC++G  
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A  +   M +     D  TY++LI G C++G ++EA ++   M     KP+   +N +
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           + G CK+ R + +  +F+ M  KG  P    Y+ ++ G+     +  + E+
Sbjct: 528 INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKEL 578



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 218/458 (47%), Gaps = 41/458 (8%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF- 190
           D  +Y+ ++ C  + G++  A   + ++   G+    +T++ L++GLC     + ++   
Sbjct: 95  DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA---KGG-KPNLVSYNVLLT 246
           L R+   G  PNAF+Y+ LL+    E     A+ LL  ++A   +GG  P++VSY  ++ 
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           GL +EG+ ++A   F ++  +G  PN ++YN LL   C  G+ +EA  +  +M      P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            +VTYN L+  L  +G++  A KV D MVK   +P ++ Y  ++    +EG +  + + L
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334

Query: 367 DQMFHRRCKPNEGTYN----------------------------------GLAM--LCGV 390
           D M     +P+   +N                                  G  M  LC V
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRV 394

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           GKV +A +    L ++  +     ++ +I  LC   K  +A +L  EM   G  P++  +
Sbjct: 395 GKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++L+  LC EG++  A  IF +M   D + DV  +  L+ G C   + D + ++ + M+ 
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVL 514

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            G  PNE TY  ++ G      +E +  + +++  + V
Sbjct: 515 DGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGV 552



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 183/405 (45%), Gaps = 1/405 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + MV KGHKPD      LL+       + +  +++++MV +G  PD   +  L+    K
Sbjct: 299 FDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAK 358

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  AM    KM   G   N VTY +++  LC +G ++ ++   DRLI +GL PN   
Sbjct: 359 HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVV 418

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +  L+           A +L  ++I +G  PN + +N LL  LCKEG    A   F  + 
Sbjct: 419 FRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMV 478

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
               + +V++Y  L+   C++G+ +EA +LL  M      P  VTYN +I     +G+ +
Sbjct: 479 RVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIE 538

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GL 384
            A  +  +M      P    Y+ I+  L    ++    +    M     K   GTYN  L
Sbjct: 539 DACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIIL 598

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC      +A  +  +L           +  +I +L + G+  +A  L   +   G  
Sbjct: 599 QGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLV 658

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           P+  TY  +++ L  +GL+EE  ++F+ +E+     D    NAL+
Sbjct: 659 PNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALV 703



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 153/328 (46%), Gaps = 35/328 (10%)

Query: 67  GNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS 126
           G   D   R  K++DA  Q +R++S+G  P+ V    L++ LC  +K  KA ++   M+ 
Sbjct: 385 GTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIG 444

Query: 127 SGIIPDASSYTYLVNCLCKKGNV---------------------------GY-------- 151
            GI P+   +  L+N LCK+G V                           GY        
Sbjct: 445 RGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDE 504

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A +L+E M   G   N VTYN+++ G C  G +  +     ++  KG+ P    YS +L 
Sbjct: 505 ATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILH 564

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
             ++ R + AA +L   +I  G K  + +YN++L GLC+   T++A+R F +L    F  
Sbjct: 565 GLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHL 624

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
              ++NI++ +L   GR +EA +L A +      P +VTY +++ SL   G  +    + 
Sbjct: 625 QNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLF 684

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKV 359
             + K      +   N ++ +L  +G+V
Sbjct: 685 LSLEKNGCTADSRMLNALVGKLPQKGEV 712



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 5/155 (3%)

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +E+ A+  SL N+   +    Y  VI    R G    AF  L  + + G+T  + T+S L
Sbjct: 78  RESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPL 137

Query: 454 IRGLCMEGLIEEALEIFV-VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK- 511
           ++GLC +    +A++I +  M      P+  ++N LL GLC   R+  +L +   M+   
Sbjct: 138 LKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADD 197

Query: 512 ---GQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              G  P+  +YT ++ G+  + +L+ +  +  E+
Sbjct: 198 TRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM 232


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 232/472 (49%), Gaps = 1/472 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+DA      MV     P + +   LL  + K  K    I + E M   GI  +  +Y 
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+NC C++  +  A+ L+ KM   GY  + VT +SL+ G C    ++ ++  +D++++ 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  T++ L+   +       A+ L+D ++ +G +PNLV+Y V++ GLCK G  + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 + +   E NVV Y+ ++ SLC     ++A  L  EM+     P ++TY+ LI  
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  + +   A ++L +M++ +  P+  ++N +I     EGK+    K  D+M  R   P+
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ L    C   ++ EA  + + + +K        Y  +I   C+  +  +  +L  
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM++ G   ++ TY++LI G       + A  +F  M      P++  +N LL GLCK+ 
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + + ++ VF+ +      P   TY I++EG+    ++E   ++   L L+ V
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 217/449 (48%), Gaps = 7/449 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++ A   L +M+  G++P +V  ++LL   C   ++  A+ +++ MV  G  PD  
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++ L        A+ LV++M   G   N VTY  +V GLC  G+++ +   L+++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               +  N   YS ++++  K R    A+ L  ++  KG +PN+++Y+ L++ LC   R 
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A R   D+  +   PNVV++N L+ +   EG+  EA +L  EM      P I TY+ L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I     H + D A  + + M+     P+  +YN +I   C   ++D  V+   +M  R  
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431

Query: 375 KPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             N  TY    +G          Q  F  + S G   N      Y  ++  LC+ GK  +
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT---YNTLLDGLCKNGKLEK 488

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  +   + +    P  YTY+ +I G+C  G +E+  ++F  +     KPDV  +N ++ 
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           G C+    + +  +F+ M E G +P+  T
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 191/417 (45%), Gaps = 36/417 (8%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
            + + +  Y  ++R       L+ ++     +++   +P+ F ++ LL A  K +     
Sbjct: 45  AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           + L + +   G   NL +YN+L+   C+  +   A+     +   G+EP++V+ + LL  
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C   R  +A  L+ +M      P  +T+  LI  L  H K   A+ ++D MV+   +P+
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQM---------------FHRRCK------------ 375
             +Y  ++  LC  G +DL    L++M                   CK            
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284

Query: 376 --------PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
                   PN  TY+ L + LC   +  +A  ++  +  ++ +     +  +I +  ++G
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           K  +A +L  EM K    PD +TYSSLI G CM   ++EA  +F +M   D  P+V  +N
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            L+ G CK++R D  +E+F+ M ++G + N  TYT L+ G     + + +  V K++
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 136/316 (43%), Gaps = 15/316 (4%)

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
           G P +   ++ L G+C  GR               F      Y  +LR+     + ++A 
Sbjct: 25  GNPRIAPSSIDLCGMCYWGR--------------AFSSGSGDYREILRNGLHSMKLDDAI 70

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L   M      P+I  +N L+ ++A   K D  + + ++M +     +  +YN +I   
Sbjct: 71  GLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C   ++ L +  L +M     +P+  T + L    C   ++ +A A++  +         
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             +  +I  L    K  +A  L+  M + G  P+  TY  ++ GLC  G I+ A  +   
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           ME    + +V  ++ ++  LCK R  D +L +F  M  KG  PN  TY+ L+  + + + 
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310

Query: 533 LELSAEVLKELQLRQV 548
              ++ +L ++  R++
Sbjct: 311 WSDASRLLSDMIERKI 326



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 49/299 (16%)

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           R+L  KG  P +   +I L  +C  GR   +         GD       Y  ++ +  + 
Sbjct: 19  RNLQGKG-NPRIAPSSIDLCGMCYWGRAFSSGS-------GD-------YREILRNGLHS 63

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            K D A+ +   MVK R  PS   +N +++ +    K DLV+   ++M            
Sbjct: 64  MKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM------------ 111

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
                              Q LG   N      Y  +I   CR+ +   A  LL +M K 
Sbjct: 112 -------------------QRLGISHNLYT---YNILINCFCRRSQISLALALLGKMMKL 149

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G+ P   T SSL+ G C    I +A+ +   M E  Y+PD   F  L+ GL    +   +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           + +   M+++G  PN  TY ++V G+  + +++L+  +L +++  ++ +   +   V+ 
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 228/466 (48%), Gaps = 2/466 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           + +KG  P       LL  L +AN+ +K  +  ++ V  G+ PD   +T  +N  CK G 
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAINAFCKGGK 288

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A++L  KME+ G   N VT+N+++ GL M G  +++  F ++++++G+ P   TYS 
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   + + +  A  +L ++  KG  PN++ YN L+    + G   +AI     + SKG
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
                 +YN L++  C  G+ + A  LL EM     +    ++  +I  L  H   D AL
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           + + EM+     P       +I+ LC  GK    ++   Q  ++    +  T N L   L
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK+ EAF I + +  +     +  Y  +I+  C K K  +AF  L EM K G  PD+
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           YTYS LI GL     +EEA++ +   +     PDV  ++ ++ G CK+ RT+   E F  
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 648

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           M+ K   PN   Y  L+        L ++ E+ ++++ + +   SA
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 227/478 (47%), Gaps = 34/478 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++ DA+  L+ M  KG  P+V+   NL+    +A  + KAI++ ++MVS G+   +S
Sbjct: 355 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 414

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   CK G    A +L+++M   G+  N  ++ S++  LC     + +L+F+  +
Sbjct: 415 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 474

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + + + P     + L+    K      A++L    + KG   +  + N LL GLC+ G+ 
Sbjct: 475 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 534

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA R  +++  +G   + VSYN L+   C + + +EA   L EM      P   TY+IL
Sbjct: 535 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 594

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K + A++  D+  +    P   +Y+ +I   C   + +   +  D+M  +  
Sbjct: 595 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 654

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           +PN   YN                                  ++I + CR G+   A +L
Sbjct: 655 QPNTVVYN----------------------------------HLIRAYCRSGRLSMALEL 680

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M   G +P+S TY+SLI+G+ +   +EEA  +F  M     +P+V ++ AL+ G  K
Sbjct: 681 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 740

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             +      + + M  K   PN+ TYT+++ G A    +  ++ +L E++ + +V +S
Sbjct: 741 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 192/414 (46%), Gaps = 38/414 (9%)

Query: 77  HKLNDAFLQ-LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           H + D+ L+ +  M+ +   P     T L+  LCK  K  KA+++    ++ G + D  +
Sbjct: 461 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 520

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              L++ LC+ G +  A ++ +++   G   + V+YN+L+ G C    L+++  FLD ++
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++GL P+ +TYS L+   +    V  A++  DD    G  P++ +Y+V++ G CK  RTE
Sbjct: 581 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 640

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           E   FF ++ SK  +PN V YN L+R+ C  GR   A EL  +M     SP   TY  LI
Sbjct: 641 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             ++   + + A  + +EM      P+   Y  +I      G++  V   L +M  +   
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 760

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           PN+ TY                                    +I    R G   +A +LL
Sbjct: 761 PNKITYT----------------------------------VMIGGYARDGNVTEASRLL 786

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            EM + G  PDS TY   I G   +G +   LE F   +E +Y   ++ +N L+
Sbjct: 787 NEMREKGIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLI 837



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 76/154 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+ A    E M  KG  P+    T+L+  +   +++++A  + E M   G+ P+  
Sbjct: 670 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 729

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++   K G +     L+ +M       N +TY  ++ G    GN+ ++ + L+ +
Sbjct: 730 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
            +KG+VP++ TY   +    K+ GV  A K  D+
Sbjct: 790 REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 228/466 (48%), Gaps = 2/466 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           + +KG  P       LL  L +AN+ +K  +  ++ V  G+ PD   +T  +N  CK G 
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAINAFCKGGK 275

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A++L  KME+ G   N VT+N+++ GL M G  +++  F ++++++G+ P   TYS 
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   + + +  A  +L ++  KG  PN++ YN L+    + G   +AI     + SKG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
                 +YN L++  C  G+ + A  LL EM     +    ++  +I  L  H   D AL
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           + + EM+     P       +I+ LC  GK    ++   Q  ++    +  T N L   L
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK+ EAF I + +  +     +  Y  +I+  C K K  +AF  L EM K G  PD+
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           YTYS LI GL     +EEA++ +   +     PDV  ++ ++ G CK+ RT+   E F  
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           M+ K   PN   Y  L+        L ++ E+ ++++ + +   SA
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 227/478 (47%), Gaps = 34/478 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++ DA+  L+ M  KG  P+V+   NL+    +A  + KAI++ ++MVS G+   +S
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   CK G    A +L+++M   G+  N  ++ S++  LC     + +L+F+  +
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + + + P     + L+    K      A++L    + KG   +  + N LL GLC+ G+ 
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA R  +++  +G   + VSYN L+   C + + +EA   L EM      P   TY+IL
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K + A++  D+  +    P   +Y+ +I   C   + +   +  D+M  +  
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           +PN   YN                                  ++I + CR G+   A +L
Sbjct: 642 QPNTVVYN----------------------------------HLIRAYCRSGRLSMALEL 667

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M   G +P+S TY+SLI+G+ +   +EEA  +F  M     +P+V ++ AL+ G  K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             +      + + M  K   PN+ TYT+++ G A    +  ++ +L E++ + +V +S
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 192/414 (46%), Gaps = 38/414 (9%)

Query: 77  HKLNDAFLQ-LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           H + D+ L+ +  M+ +   P     T L+  LCK  K  KA+++    ++ G + D  +
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              L++ LC+ G +  A ++ +++   G   + V+YN+L+ G C    L+++  FLD ++
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++GL P+ +TYS L+   +    V  A++  DD    G  P++ +Y+V++ G CK  RTE
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           E   FF ++ SK  +PN V YN L+R+ C  GR   A EL  +M     SP   TY  LI
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             ++   + + A  + +EM      P+   Y  +I      G++  V   L +M  +   
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           PN+ TY                                    +I    R G   +A +LL
Sbjct: 748 PNKITYT----------------------------------VMIGGYARDGNVTEASRLL 773

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            EM + G  PDS TY   I G   +G +   LE F   +E +Y   ++ +N L+
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLI 824



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 76/154 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+ A    E M  KG  P+    T+L+  +   +++++A  + E M   G+ P+  
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++   K G +     L+ +M       N +TY  ++ G    GN+ ++ + L+ +
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
            +KG+VP++ TY   +    K+ GV  A K  D+
Sbjct: 777 REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 249/480 (51%), Gaps = 9/480 (1%)

Query: 77  HKLNDAFLQLER---MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           +KLN     ++R   ++ +G +P+++   +++  LCK   ++ A  ++  +  SG+ PD 
Sbjct: 204 NKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDT 263

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT ++   C+  ++  A ++  +M++ G   N  TY++L+ GLC  G +N++L F+  
Sbjct: 264 FTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISE 323

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + + G++P   T++  + A      +  A K+  D+  KG KPN+ +Y  L++G   +  
Sbjct: 324 MTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRV 380

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS-PTIVTYN 312
           +  AI  F  +   G  PN V+YN L+  L ME    ++  ++  M G     P   +YN
Sbjct: 381 SRMAIGLFHRMSRDGVVPNTVTYNALMNVL-MENMEIDSALIVFNMMGKHGCLPNTSSYN 439

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI      G T+ A+ +L  M+KGR  P+  +YN II   C  G  D+ ++ L+ M   
Sbjct: 440 ELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKAN 499

Query: 373 RCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C+P+E +Y  L +  C + K++ A  +   + ++     +  Y  +I+  C+  K   A
Sbjct: 500 GCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCA 559

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++L  M + G  P+  TY+ LI GL  +     A E+  VM E    PDV  ++ ++ G
Sbjct: 560 ARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVING 619

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           LC +    L+LE+F  M++ G +PN  TY+ L++ +  +  +E + E+  EL+ + ++ +
Sbjct: 620 LCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPD 679



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 231/470 (49%), Gaps = 4/470 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  + DA   + ++   G KPD    T+++   C+   +  A ++   M   G  P+A+
Sbjct: 240 KDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAA 299

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+N LC  G V  A+  + +M  +G      T+ + +  LC +G +  + +    +
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDM 359

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG  PN +TY+ L+     +R    A+ L   +   G  PN V+YN L+  L +    
Sbjct: 360 KKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+  F  +   G  PN  SYN L+R  C  G  E+A  +L  M  G  +PT+VTYNI+
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G TD A++VL+ M     +P   SY  +I+  C   K++L     ++M  R  
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGL 536

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PNE TY  L +  C   K+  A  +++ +         + Y  +I  L ++     A +
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 596

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   M +   +PD  TYS++I GLC  G I  ALE+F  M ++   P++  +++L+  L 
Sbjct: 597 LCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALG 656

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +  R + + E+F  + ++G +P+E TY  ++E      +++ + + L E+
Sbjct: 657 QEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEM 706



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 231/490 (47%), Gaps = 28/490 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA+     M  KG KP+V   T+L+    + ++M  AI +   M   G++P+  +Y 
Sbjct: 348 RIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRM--AIGLFHRMSRDGVVPNTVTYN 404

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N L +   +  A+ +   M  +G   NT +YN L+RG C +G+  +++  L  +++ 
Sbjct: 405 ALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKG 464

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P   TY+ +++          A+++L+ + A G +P+  SY  L++G CK  + E A
Sbjct: 465 RPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELA 524

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F ++  +G  PN V+Y  L+   C + + + A  +L  M      P + TYN+LI  
Sbjct: 525 SGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHG 584

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L        A ++   M++ +  P   +Y+ +I  LC+ G + L ++  ++M    C PN
Sbjct: 585 LTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPN 644

Query: 378 EGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC-RKGKTYQAFQLL 435
             TY+ L    G  G+V+EA  +   L  KQ   P E     +  +C   GK  +AF  L
Sbjct: 645 LHTYSSLIQALGQEGRVEEAEEMFSEL-KKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFL 703

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL------------------EIFVVME--- 474
            EM   G  P   TY  LI+GL  E +  + +                  ++  V+    
Sbjct: 704 GEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKL 763

Query: 475 -EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            E D++     ++ALL  L +S R   +  +++ M+ + Q PN+ TY   +  +    ++
Sbjct: 764 AELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKV 823

Query: 534 ELSAEVLKEL 543
           +L+ +V K +
Sbjct: 824 DLAMDVFKHM 833



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 196/415 (47%), Gaps = 18/415 (4%)

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR---L 194
           +++     K  +  A+  ++     G      TY +L   L  L  LN +   +DR   +
Sbjct: 163 HMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTL---LIQLNKLNMTSTVMDRYHQI 219

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++GL PN   Y+ ++ A  K+  V  A  +++ +   G KP+  +Y  ++ G C+    
Sbjct: 220 LREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDL 279

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A   F  +  +G EPN  +Y+ L+  LC  GR  EA + ++EM      PT+ T+   
Sbjct: 280 DSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAP 339

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   G+ + A K+  +M K   +P+  +Y  +I+          V +    +FHR  
Sbjct: 340 IVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-------QRVSRMAIGLFHRMS 392

Query: 375 K----PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +    PN  TYN L  +L    ++  A  +   +G          Y  +I   C  G T 
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A  +L  M K   TP   TY+ +I+G C  G  + A+ +  +M+    +PD  ++  L+
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            G CK  + +L+  +F  M+++G  PNE TYT L+ G    ++L+ +A +L+ ++
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 210/469 (44%), Gaps = 32/469 (6%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A   L  M+     P +V    ++   C +     AI+V+E+M ++G  PD  SYT L++
Sbjct: 454 AMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELIS 513

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK   +  A  +  +M D G   N VTY +L+ G C    L+ + + L+R+ + G  P
Sbjct: 514 GFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRP 573

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L+    K+     A +L   ++ +   P++V+Y+ ++ GLC  G    A+  F
Sbjct: 574 NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G  PN+ +Y+ L+++L  EGR EEA E+ +E+      P  VTY  +I      
Sbjct: 634 NKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMS 693

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           GK D A   L EM+    +P+  +Y             D+++K L          NE  Y
Sbjct: 694 GKVDRAFDFLGEMINAGCQPTLQTY-------------DVLIKGLQ---------NEMVY 731

Query: 382 NGLAMLCGVGKV---------QEAFAIIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           + L  L               ++  +++ S L        ++ Y  +++ L R G+ ++A
Sbjct: 732 HKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEA 791

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             L   M      P+  TY   +  L     ++ A+++F  M +   +  +  +  L+  
Sbjct: 792 NNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICT 851

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           LC+  R   +  VF+ M+ +    +E  +TIL+ G+      +L  E L
Sbjct: 852 LCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFL 900



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 146/336 (43%), Gaps = 26/336 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   LERM   G +P+V     L++ L K N    A ++ ++M+   I PD  
Sbjct: 552 KDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVV 611

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ ++N LC  G +  A+++  KM  +G   N  TY+SL++ L   G + ++ +    L
Sbjct: 612 TYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSEL 671

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++GL+P+  TY  ++E       V  A   L ++I  G +P L +Y+VL+ GL  E   
Sbjct: 672 KKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVY 731

Query: 255 EEAIRFFRDLPSKGFEPNVVS----------------------YNILLRSLCMEGRWEEA 292
            + +       +  F+  +++                      Y+ LL  L   GRW EA
Sbjct: 732 HKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEA 791

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
           N L   M    + P   TY   + SL    K D A+ V   M   R       Y  +I  
Sbjct: 792 NNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICT 851

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGL 384
           LC   +        ++M  R    +E  +    NGL
Sbjct: 852 LCQLHRRKEARFVFEKMLSRALNADEIVWTILINGL 887



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/290 (20%), Positives = 107/290 (36%), Gaps = 57/290 (19%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A     +MV  G  P++   ++L+  L +  ++++A ++   +   G+IPD  +Y  ++ 
Sbjct: 629 ALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIE 688

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL---------CMLGNLNQSLQFLD 192
                G V  A   + +M + G      TY+ L++GL           L N   +  F D
Sbjct: 689 VCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDD 748

Query: 193 RLIQKGLV------------------------------------------------PNAF 204
           ++I K ++                                                PN  
Sbjct: 749 QIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQD 808

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY   L +  +   V  AM +   +  +  + +L  Y  L+  LC+  R +EA   F  +
Sbjct: 809 TYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKM 868

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            S+    + + + IL+  L   G  +   E L  M+   R+P+     IL
Sbjct: 869 LSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTIL 918


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 216/446 (48%), Gaps = 4/446 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG---IIPDASSYTYLVNC 142
           L+RM   G  PD V  T LL  LC   + ++A++++ MM         P+  SY+ ++N 
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
              +G V     L  +M D G P + VTY +++ GLC     +++     ++I  G  PN
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            +TY+ L+            +++L+++ A+G KP+  +Y  LL  LCK GR  EA  FF 
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  KG +P V +Y IL+     +G   E +  L  M     SP    +NI   + A  G
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             D A+ + ++M +    P+  +Y  +I  LC  G+VD      +QM +    PN   +N
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC V K + A  ++  + ++       F+  +I +LC  G+  +  +L+  M   
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 508

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD+++Y+ LI G C+ G  +EA ++F  M      P    +N LL G C + R D +
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGI 527
             +F+ M+ KG  P   TY  ++ G+
Sbjct: 569 YCLFREMLRKGVTPGVVTYNTILHGL 594



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 215/450 (47%), Gaps = 1/450 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+  G KP+      L++      K K+ ++++E M + G+ PD  +Y  L+N LCK
Sbjct: 257 FQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCK 316

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A    + M   G      TY  L+ G    G L++   FLD +++ GL P+   
Sbjct: 317 NGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHI 376

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++    A  K   +  AM + + +   G  PN+V+Y  L+  LCK GR ++A   F  + 
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           ++G  PN+V +N L+  LC   +WE A EL+ EM      P  V +N LI +L   G+  
Sbjct: 437 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 496

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
              +++D M     RP A SY P+I+  C  G+ D   K  D M      P E TYN L 
Sbjct: 497 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 556

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C   ++ +A+ + + +  K  +     Y  ++  L +  +  +A +L   M   G  
Sbjct: 557 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 616

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            D YTY+ ++ GLC    ++EA ++F  +     + ++  F  ++  L K  R + ++++
Sbjct: 617 CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 676

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           F  +   G +PN  TY ++ E +  +  LE
Sbjct: 677 FAAIPANGLVPNVVTYRLVAENLIEEGSLE 706



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 228/474 (48%), Gaps = 3/474 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G  PDVV  T ++  LCKA    +A  V + M+ +G  P+  +Y  L++     G 
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK 284

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
               +Q++E+M   G   +  TY SL+  LC  G   ++  F D +I+KG+ P   TY  
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344

Query: 209 LLEAAYKERGVHAAM-KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           L+   Y  +G  + M   LD ++  G  P+   +N+  +   K G  ++A+  F  +   
Sbjct: 345 LIHG-YATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQH 403

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  PNVV+Y  L+ +LC  GR ++A     +M     +P IV +N L+  L    K + A
Sbjct: 404 GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERA 463

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
            +++ EM+     P+A  +N +I  LC+ G+V    + +D M H   +P+  +Y  L + 
Sbjct: 464 EELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISG 523

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C  G+  EA  +   + +   S  +  Y  ++   C   +   A+ L  EM + G TP 
Sbjct: 524 YCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPG 583

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY++++ GL       EA E+++ M     K D+  +N +L GLCKS   D + ++FQ
Sbjct: 584 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQ 643

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            +  KG   N  T+TI++  +      E + ++   +    +V      RLV +
Sbjct: 644 SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAE 697



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 208/470 (44%), Gaps = 4/470 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +  +A    + M+ KG KP V     L++       + +    +++MV +G+ PD  
Sbjct: 316 KNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHH 375

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +    +   K G +  AM +  KM  +G   N V Y +L+  LC LG ++ +    +++
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +G+ PN   ++ L+           A +L+ +++ +G  PN V +N L+  LC  GR 
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            E  R    +   G  P+  SY  L+   C+ GR +EA ++   M     SPT VTYN L
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +       + D A  +  EM++    P   +YN I+  L    +     +    M +   
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           K +  TYN  L  LC    V EAF + QSL +K        +  +I +L + G+   A  
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   +   G  P+  TY  +   L  EG +EE   +F  ME+    P+    NAL+  L 
Sbjct: 676 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 735

Query: 494 KSRRTDLSLE-VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
              R D+S    +   +++     E + T L+  I   DE +  A+ L E
Sbjct: 736 --HRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSLPE 783



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/493 (23%), Positives = 215/493 (43%), Gaps = 45/493 (9%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA---NKMKKAIKVMEMMV--- 125
            R R   L+DA    + ++       V    +LL  + +A   +  + A+     MV   
Sbjct: 23  ARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVREC 82

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           S  + P+  +Y+ L+   C+ G++ +       +   G+  + +  N L++GLC    + 
Sbjct: 83  SDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVG 142

Query: 186 QSLQ-FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK---PNLVSY 241
           +++   L R+ + G +P+  +Y+ LL+    E+    A++LL  +    G+   PN+VSY
Sbjct: 143 EAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSY 202

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           ++++ G   EG+ ++    F ++  +G  P+VV+Y  ++  LC    ++ A  +  +M  
Sbjct: 203 SIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMID 262

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P   TYN LI      GK    +++L+EM     +P   +Y  ++  LC  G+   
Sbjct: 263 NGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCRE 322

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
                D M  +  KP   TY  L                                  I  
Sbjct: 323 ARFFFDSMIRKGIKPKVSTYGIL----------------------------------IHG 348

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
              KG   +    L  M + G +PD + ++         G+I++A++IF  M ++   P+
Sbjct: 349 YATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPN 408

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           V N+ AL+  LCK  R D +   F  MI +G  PN   +  LV G+   D+ E + E++ 
Sbjct: 409 VVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVY 468

Query: 542 ELQLRQVVSESAV 554
           E+ L Q +  +AV
Sbjct: 469 EM-LDQGICPNAV 480


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 219/446 (49%), Gaps = 4/446 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS---GIIPDASSYTYLVNC 142
           ++RM   G  PDVV    LL   C   + ++A++++ MM  S      P+  SY  ++N 
Sbjct: 153 VKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVING 212

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
              +G V  A  L  +M D G   N VTY +++ GLC    ++++     ++I KG+ P+
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+            +++L+++ A G KP+  +Y  LL  LC  GR  EA   F 
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  KG +PNV  Y IL+     +G   E ++LL  M     SP    +NI+  + A   
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             D A+ + ++M +    P   +Y  +I  LC  G+VD  V   +QM +    PN   +N
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC V K ++A      + N+       F+  ++ +LC KG+  +A +L+  M + 
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P   +Y++LI G C+ G I+EA +   VM     KPD   +N LL G C++ R D +
Sbjct: 513 GTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDA 572

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGI 527
             VF+ M+  G  P   TY+ ++ G+
Sbjct: 573 YGVFREMLRNGITPGVVTYSTILHGL 598



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 221/450 (49%), Gaps = 1/450 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+ KG KPD      L++      K K+ ++++E M + G+ PD  +Y  L+N LC 
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A  L + M   G   N   Y  L+ G    G L++    L+ +++ GL P+   
Sbjct: 321 NGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ +  A  K+  +  AM + + +  +G  P++V+Y  L+  LCK GR ++A+  F  + 
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           ++G  PN+  +N L+  LC   +WE+A E   EM      P +V +N ++ +L   G+  
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A +++D M +   RP   SY  +I   C  G++D   K LD M     KP+E TYN L 
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G++ +A+ + + +     +     Y  ++  L    +  +A +L   M   G  
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            + + Y+ ++ GL     ++EA ++F  +   D++ ++  FN ++  L KS R + ++ +
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           F  +   G +P+  TY ++ E +  +  LE
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLE 710



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 209/479 (43%), Gaps = 48/479 (10%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS----------SG 128
           L+DA    + +++      V+   +LL  + + +  + +    E++VS            
Sbjct: 30  LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + PD  +Y+ L+ C C+ G + +       +   G+  N +  N L++GLC    L +++
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 189 QFL-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK---PNLVSYNVL 244
             L  R+ + G  P+  +Y+ LL+    E+    A++LL  +    G+   PN+VSY ++
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + G   EG+ ++A   F ++  +G +PNVV+Y  ++  LC     + A  +  +M     
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P   TYN LI      GK    +++L+EM     +P   +Y  ++  LC+ G+      
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
             D M  +  KPN   Y  L                                  I     
Sbjct: 330 LFDSMIRKGIKPNVAIYGIL----------------------------------IHGYAT 355

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           KG   +   LL  M + G +PD + ++ +      + +I+EA+ IF  M++    PDV N
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + AL+  LCK  R D ++  F  M+ +G  PN   +  LV G+   D+ E + E   E+
Sbjct: 416 YGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM 474



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 171/358 (47%), Gaps = 1/358 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA L+  +M+++G  P++    +L+Y LC  +K +KA +    M++ GI PD   + 
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC KG V  A +L++ ME  G     ++Y +L+ G C++G ++++ + LD ++  
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+ +TY+ LL    +   +  A  +  +++  G  P +V+Y+ +L GL    R  EA
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              + ++ + G + N+  YNI+L  L      +EA +L   +   D    I T+NI+IG+
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A+ +   +      P   +Y  I   L  EG ++        M      PN
Sbjct: 668 LFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
               N L   L   G +  A A +  L  K  S        +I+ L R    + A  L
Sbjct: 728 SRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 153/377 (40%), Gaps = 50/377 (13%)

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL----------------------------- 248
           G+  A+KL D ++      +++++N LLT +                             
Sbjct: 29  GLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTI 88

Query: 249 ----------------CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
                           C+ GR E     F  +   G+  N +  N LL+ LC   R  EA
Sbjct: 89  KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148

Query: 293 NELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR---PSAASYNP 348
            ++L + M     +P +V+YN L+       + + AL++L  M   + R   P+  SY  
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQ 407
           +I    +EG+VD       +M  R  +PN  TY   +  LC    V  A  + Q + +K 
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                + Y  +I      GK  +  ++L EM+ +G  PD YTY SL+  LC  G   EA 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +F  M     KP+V  +  L+ G           ++  +M+E G  P+   + I+    
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 528 AHQDELELSAEVLKELQ 544
           A +  ++ +  +  +++
Sbjct: 389 AKKAMIDEAMHIFNKMK 405



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 88/221 (39%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++DA+     M+  G  P VV  + +L+ L    +  +A ++   M++SG   +  
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  ++N L K   V  A +L + +    +     T+N ++  L   G    ++     +
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATI 684

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GLVP+ FTY  + E   +E  +     L   +   G  PN    N L+  L   G  
Sbjct: 685 SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI 744

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
             A  +   L  K F     +  +L+  L  +     A  L
Sbjct: 745 TRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 229/426 (53%), Gaps = 13/426 (3%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+ V     +   C+   + +A+++++ M   G  PD   Y+ L+N   ++G+V  A+ L
Sbjct: 223 PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 282

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +  M       NTV YN+ ++GLC+        + +  +++KG  PN  T+S L+ +  +
Sbjct: 283 LNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 339

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              V +A+++L+ +   G +P+ V+YN+++  L + GR ++A+R    +  K   P+ + 
Sbjct: 340 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALG 396

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +N +L+  C   RW +A+EL+A+M   D     +T+NILI  L  +G  ++A +V ++M 
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 456

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
           + R  P   +Y+ ++     +G V++ ++    M    CKP+  +YN  L  LC   + +
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWE 513

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A  +I  +  K     +  +  +I SLC+KG   +A ++L +M  YG TPD +TY++LI
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G   +G +++AL++   M     KPD  ++N+ L GLC++ R   + E+   M+     
Sbjct: 574 NGFSEQGRLDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCT 630

Query: 515 PNETTY 520
           PNE T+
Sbjct: 631 PNEVTF 636



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 235/446 (52%), Gaps = 14/446 (3%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           V    L+   C+  ++  A +V+    ++G   +  +YT L++  C+ G +  A++L+  
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATGA-ANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M       +T TYN++++GLC+     ++ + +  +I+    PN  T++  + +  +   
Sbjct: 184 MP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           +  A++LLD +   G  P++V Y+ L+ G  ++G  ++A+     +  K   PN V YN 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNA 297

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
            L+ LC+  RWE+  EL+AEM     SP   T+++LI SL  +   D A++VL++M K  
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAF 397
             P   +YN II  L   G+VD  ++ L+ M    CKP+   +N  L   C   +  +A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDAS 414

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +I  +        +  +  +I  LC+ G    A Q+  +M +Y  TPD  TYSSL+ G 
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 474

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
             +GL+E A+++F  M     KPD+ ++NA+L GLC++ R + + E+   M+ K   PNE
Sbjct: 475 SEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 531

Query: 518 TTYTILVEGIAHQDELELSAEVLKEL 543
            T+ IL+  +  +  ++ + EVL+++
Sbjct: 532 VTFNILINSLCQKGLVDRAIEVLEQM 557



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 230/473 (48%), Gaps = 14/473 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +L DA   L    + G   +VV  T L+   C++ ++  A++   ++ S  + PD  
Sbjct: 136 RDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALR---LIASMPVAPDTY 191

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  LC       A +L+ +M     P N VT+ + +R  C  G L++++Q LD++
Sbjct: 192 TYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM 251

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G  P+   YS L+    ++  V  A+ LL+ ++ K   PN V YN  L GLC   R 
Sbjct: 252 PRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERW 308

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+      ++  KG  PN  ++++L+ SLC     + A E+L +M+     P  V YNI+
Sbjct: 309 EDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNII 368

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL+  G+ D AL++L+ MV    +P A  +N ++   C   +     + + QMF   C
Sbjct: 369 INSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDC 425

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
              E T+N L  MLC  G V  A  + + +   + +     Y  ++     +G    A Q
Sbjct: 426 PLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQ 485

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   M      PD ++Y+++++GLC     E+A E+   M   D  P+   FN L+  LC
Sbjct: 486 LFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLC 542

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +    D ++EV + M   G  P+  TY  L+ G + Q  L+ + ++L  +  +
Sbjct: 543 QKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK 595



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 182/360 (50%), Gaps = 45/360 (12%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP+ V     L  LC A + +   ++M  MV  G  P+ ++++ L++ LC+   V  A++
Sbjct: 289 KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 348

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           ++E+ME YG   +TV YN ++  L   G ++ +L+ L+ ++ K   P+A  ++ +L+   
Sbjct: 349 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFC 405

Query: 215 KERGVHAAMKL------------------LDDIIAKGG-----------------KPNLV 239
           +    H A +L                  L D++ + G                  P++V
Sbjct: 406 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 465

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +Y+ LL G  ++G  E AI+ FR +P K   P++ SYN +L+ LC   RWE+A EL+AEM
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            G D  P  VT+NILI SL   G  D A++VL++M      P   +YN +I     +G++
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D  +K L  M    CKP+  +YN  L  LC   + Q+A  ++  +   + +  +  +KY 
Sbjct: 583 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYA 639


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 228/466 (48%), Gaps = 2/466 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           + +KG  P       LL  L +AN+ +K  +  ++ V  G+ PD   +T  +N  CK G 
Sbjct: 206 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAINAFCKGGK 264

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A++L  KME+ G   N VT+N+++ GL M G  +++  F ++++++G+ P   TYS 
Sbjct: 265 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   + + +  A  +L ++  KG  PN++ YN L+    + G   +AI     + SKG
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 384

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
                 +YN L++  C  G+ + A  LL EM     +    ++  +I  L  H   D AL
Sbjct: 385 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 444

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           + + EM+     P       +I+ LC  GK    ++   Q  ++    +  T N L   L
Sbjct: 445 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 504

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK+ EAF I + +  +     +  Y  +I+  C K K  +AF  L EM K G  PD+
Sbjct: 505 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 564

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           YTYS LI GL     +EEA++ +   +     PDV  ++ ++ G CK+ RT+   E F  
Sbjct: 565 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 624

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           M+ K   PN   Y  L+        L ++ E+ ++++ + +   SA
Sbjct: 625 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 670



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 227/478 (47%), Gaps = 34/478 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++ DA+  L+ M  KG  P+V+   NL+    +A  + KAI++ ++MVS G+   +S
Sbjct: 331 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 390

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   CK G    A +L+++M   G+  N  ++ S++  LC     + +L+F+  +
Sbjct: 391 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 450

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + + + P     + L+    K      A++L    + KG   +  + N LL GLC+ G+ 
Sbjct: 451 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 510

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA R  +++  +G   + VSYN L+   C + + +EA   L EM      P   TY+IL
Sbjct: 511 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 570

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K + A++  D+  +    P   +Y+ +I   C   + +   +  D+M  +  
Sbjct: 571 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 630

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           +PN   YN                                  ++I + CR G+   A +L
Sbjct: 631 QPNTVVYN----------------------------------HLIRAYCRSGRLSMALEL 656

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M   G +P+S TY+SLI+G+ +   +EEA  +F  M     +P+V ++ AL+ G  K
Sbjct: 657 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 716

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             +      + + M  K   PN+ TYT+++ G A    +  ++ +L E++ + +V +S
Sbjct: 717 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 774



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 192/414 (46%), Gaps = 38/414 (9%)

Query: 77  HKLNDAFLQ-LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           H + D+ L+ +  M+ +   P     T L+  LCK  K  KA+++    ++ G + D  +
Sbjct: 437 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 496

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              L++ LC+ G +  A ++ +++   G   + V+YN+L+ G C    L+++  FLD ++
Sbjct: 497 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 556

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++GL P+ +TYS L+   +    V  A++  DD    G  P++ +Y+V++ G CK  RTE
Sbjct: 557 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 616

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           E   FF ++ SK  +PN V YN L+R+ C  GR   A EL  +M     SP   TY  LI
Sbjct: 617 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 676

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             ++   + + A  + +EM      P+   Y  +I      G++  V   L +M  +   
Sbjct: 677 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 736

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           PN+ TY                                    +I    R G   +A +LL
Sbjct: 737 PNKITYT----------------------------------VMIGGYARDGNVTEASRLL 762

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            EM + G  PDS TY   I G   +G +   LE F   +E +Y   ++ +N L+
Sbjct: 763 NEMREKGIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLI 813



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 76/154 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+ A    E M  KG  P+    T+L+  +   +++++A  + E M   G+ P+  
Sbjct: 646 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 705

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++   K G +     L+ +M       N +TY  ++ G    GN+ ++ + L+ +
Sbjct: 706 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 765

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
            +KG+VP++ TY   +    K+ GV  A K  D+
Sbjct: 766 REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 216/448 (48%), Gaps = 43/448 (9%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           ++  LC+ +++ +A+++ E M    + PD+ SY  L++ L K G +  A  L +K+   G
Sbjct: 294 VILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSG 353

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              +TV Y SL+ GLCM  + + + +    + ++G  P+  TY+ +++A+ K   +  A 
Sbjct: 354 VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEAC 413

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L+  +I  G  P++V+YN ++ GLCK  R EEA+  F ++   G  PN  S+N ++  L
Sbjct: 414 DLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL 473

Query: 284 CME---------GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           C +         G+ +EA  LL  M      P +VTY+ LI  L    + D A  +L++M
Sbjct: 474 CQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 533

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ 394
           VK + +P+  + N +I  LC  G++    + LD M      P+  TYN L          
Sbjct: 534 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL---------- 583

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
                                   +   CR G+T +A +LL +M   G  P+  TY++L+
Sbjct: 584 ------------------------VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 619

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC    + EA  +F  M+     P++  + AL+LG C + + D  L++F  M+  G  
Sbjct: 620 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGIS 679

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKE 542
           P+   Y  L   +        + E+L+E
Sbjct: 680 PDHVVYGTLAAELCKSGRSARALEILRE 707



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 226/484 (46%), Gaps = 18/484 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++++A    E+M  +   PD      L+  L KA K+  A  + + ++ SG+ P   
Sbjct: 300 QNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTV 359

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++ LC   +   A +L   M   G P + VTYN ++   C  G L ++   + ++
Sbjct: 360 AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 419

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE--- 251
           I+ G VP+  TY+ +++   K   V  A+ L +++   G  PN  S+N ++ GLC++   
Sbjct: 420 IEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKI 479

Query: 252 ------GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
                 G+ +EA R  + +   G  P+VV+Y+ L+  LC   R ++A  LL +M      
Sbjct: 480 DQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 539

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           PT+VT N LI  L   G+   A +VLD MV     P   +YN ++   C  G+ +   + 
Sbjct: 540 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 599

Query: 366 LDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLC 423
           L  M  R   PN  TY  L + LC   ++ EA  +   +      +P  F Y  +I   C
Sbjct: 600 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM-KSSGCAPNLFTYTALILGFC 658

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY----DYK 479
             G+     +L  EM   G +PD   Y +L   LC  G    ALEI     E      + 
Sbjct: 659 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 718

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
            +V  F   + GL ++ + +++L   + M+  GQ+P       LV G+    +   +  V
Sbjct: 719 DEVYRFA--VDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAV 776

Query: 540 LKEL 543
           L+E+
Sbjct: 777 LEEI 780



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 221/457 (48%), Gaps = 31/457 (6%)

Query: 94  HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
            +P +V    LL   C   ++ KA +++  M      PD  SY  +++ LCK G V  A+
Sbjct: 208 REPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAV 267

Query: 154 QLVEKMEDYGYPTNTVT------YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +L    E     +++ +      YN ++ GLC    +++++Q  +++ ++ + P++++Y 
Sbjct: 268 RLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYG 327

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++   K   ++ A  L   ++  G  P+ V+Y  L+ GLC     ++A   F D+  +
Sbjct: 328 ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 387

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+ V+YN+++ + C  G  EEA +L+ +M      P +VTYN ++  L    + + A
Sbjct: 388 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 447

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           L + +EM +    P+  S+N II  LC + K+D                           
Sbjct: 448 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKID-------------------------QA 482

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK+ EAF +++ + +  +      Y  +I+ LC   +   A  LL +M K    P  
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            T ++LI GLC  G I+EA E+   M      PDV  +N L+ G C++ +T+ + E+   
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           M+ +G  PN  TYT LV G+   + L  +  V  +++
Sbjct: 603 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 639



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 236/520 (45%), Gaps = 58/520 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A L ++ M S+   P    ++ L ++LC    M++A +++E+M     + ++S+Y 
Sbjct: 94  KMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP----VANSSAYN 149

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V  LCK   V  A++L   M +   P    + +S++ GL   G ++++LQ      ++
Sbjct: 150 IVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE 209

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P   T + LLE       V  A +LL  +  +   P+ VSY  +L GLCK GR EEA
Sbjct: 210 ---PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEA 266

Query: 258 IRFFRD------LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           +R F D        S    P++  YNI++  LC   R +EA ++  +M+  + SP   +Y
Sbjct: 267 VRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSY 326

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
            ILI  LA  GK + A  +  +++     PS  +Y  +I  LC     D   +    M  
Sbjct: 327 GILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 386

Query: 372 RRCKPNEGTYNGLA------------------------------------MLCGVGKVQE 395
           R C P+  TYN +                                      LC   +V+E
Sbjct: 387 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEE 446

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSL---------CRKGKTYQAFQLLYEMTKYGFTPD 446
           A  +   +     +  +  +  +I  L         C++GK  +AF+LL  MT  G  PD
Sbjct: 447 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPD 506

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TYS+LI GLC    +++A  +   M +   KP V   N L+ GLCK+ R   + EV  
Sbjct: 507 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 566

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            M+  GQ P+  TY  LV G     + E + E+L ++  R
Sbjct: 567 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 606



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 238/510 (46%), Gaps = 74/510 (14%)

Query: 96  PDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           PDV    N+L D L K  + +   K++++MV  G  PD+ ++T ++  LCK G +  A  
Sbjct: 44  PDVY---NVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAEL 100

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           ++++M     P    T + L   LC+ G++ ++ Q L+ +     V N+  Y+ ++ A  
Sbjct: 101 VMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALC 156

Query: 215 KERGVHAAMKL---------------LDDIIA---KGGK--------------PNLVSYN 242
           K   V  A++L               LD ++      G+              P LV+ N
Sbjct: 157 KAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLN 216

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           VLL G C  G+ ++A    R +P +   P+ VSY  +L  LC  GR EEA  L      G
Sbjct: 217 VLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLF-----G 271

Query: 303 DRS-----------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           DR            P++  YNI+I  L  + + D A+++ ++M +    P + SY  +I 
Sbjct: 272 DRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILID 331

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQ 407
            L   GK++       ++ H    P+   Y    +GL M       +E FA +    N++
Sbjct: 332 GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM----NRR 387

Query: 408 NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
              P    Y  +I + C++G   +A  L+ +M + G  PD  TY++++ GLC    +EEA
Sbjct: 388 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 447

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL------EVFQM---MIEKGQMPNE 517
           L +F  ME     P+  + N ++LGLC+  + D +       E F++   M + G +P+ 
Sbjct: 448 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDV 507

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQ 547
            TY+ L+ G+     ++ +  +L+++  RQ
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDMVKRQ 537



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 218/492 (44%), Gaps = 50/492 (10%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  +G  P  +  T+++   C   +  +A+K+  +M      P    Y  L++ L K+  
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHS-PYPDVYNVLIDSLSKRQE 59

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
                ++V+ M D G   ++ T+ +++ GLC  G ++++   +D +  + + P   T SF
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L         +  A +LL+ +       N  +YN+++  LCK  R ++A+   R +  K 
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKR 175

Query: 269 F--------------------------------EPNVVSYNILLRSLCMEGRWEEANELL 296
                                            EP +V+ N+LL   C  G+ ++A ELL
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELL 235

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE------MVKGRFRPSAASYNPII 350
             M   + +P  V+Y  ++  L   G+ + A+++  +             PS   YN +I
Sbjct: 236 RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVI 295

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNK 406
             LC   ++D  V+  ++M  R   P+  +Y    +GLA     GK+ +A  + Q L + 
Sbjct: 296 LGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAK---AGKLNDARNLFQKLLHS 352

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
             +     Y  +I  LC       A +L  +M + G  P   TY+ +I   C  G++EEA
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 412

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            ++   M E  + PDV  +N ++ GLCKS R + +L +F  M   G  PN  ++  ++ G
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472

Query: 527 IAHQDELELSAE 538
           +  Q +++ + +
Sbjct: 473 LCQQSKIDQACQ 484



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 174/380 (45%), Gaps = 29/380 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK---------MKKAIKVM 121
           D   +  ++ +A L    M   G  P+      ++  LC+ +K         + +A +++
Sbjct: 436 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLL 495

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
           + M   G +PD  +Y+ L++ LC    V  A  L+E M         VT N+L+ GLC  
Sbjct: 496 KRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKA 555

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           G + ++ + LD ++  G  P+  TY+ L+    +      A +LL D++A+G  PN+V+Y
Sbjct: 556 GRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTY 615

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             L++GLCK  R  EA   F  + S G  PN+ +Y  L+   C  G+ +   +L  EM  
Sbjct: 616 TALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVC 675

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR-----LCSE 356
              SP  V Y  L   L   G++  AL++L E   GR    + ++   + R     L   
Sbjct: 676 AGISPDHVVYGTLAAELCKSGRSARALEILRE---GRESLRSEAWGDEVYRFAVDGLLEA 732

Query: 357 GKVDLVVKCLDQMFHRRCKPN-EGTYNGLAMLCGVGKVQEAFAIIQSL-----GNKQNSS 410
           GK+++ +  +  M      P  E   + +A LC  G+  EA A+++ +     G K    
Sbjct: 733 GKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGK 792

Query: 411 PQEFYKYVITSLCRKGKTYQ 430
             +F + ++      GK Y+
Sbjct: 793 AAKFVEEMV------GKGYE 806



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 191/415 (46%), Gaps = 50/415 (12%)

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           + S+++G C +G   ++++    L+++   P    Y+ L+++  K +   A  K++  ++
Sbjct: 13  FTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMV 71

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +G  P+  ++  +L GLCK G+ +EA     ++ S+   P   + + L   LC+ G  E
Sbjct: 72  DRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSME 131

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV---------------LDEMV 335
            A +LL  M   + S     YNI++ +L    + D AL++               LD ++
Sbjct: 132 RAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVL 187

Query: 336 KG-----------------RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
            G                 R  P   + N ++   CS G+VD   + L  M    C P+E
Sbjct: 188 VGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDE 247

Query: 379 GTY-NGLAMLCGVGKVQEAFAIIQSLGNKQ---------NSSPQEFYKYVITSLCRKGKT 428
            +Y   L  LC  G+V+EA   ++  G+++         +      Y  VI  LC+  + 
Sbjct: 248 VSYCTVLDGLCKAGRVEEA---VRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRI 304

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A Q+  +M +   +PDS++Y  LI GL   G + +A  +F  +      P    + +L
Sbjct: 305 DEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL 364

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + GLC +   D + E+F  M  +G  P+  TY ++++    +  LE + +++K++
Sbjct: 365 IHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 419



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 9/280 (3%)

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  P  + +  +++  C  GR  EA ++ + M+    SP    YN+LI SL+   +T+ 
Sbjct: 4   QGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEEC-HSPYPDVYNVLIDSLSKRQETEA 62

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
             K++  MV     P + ++  I+  LC  GK+D     +D+M  R   P   T + LA 
Sbjct: 63  VKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAH 122

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G ++ AF +++ +    +S+    Y  V+ +LC+  +   A +L   M++     
Sbjct: 123 ELCLRGSMERAFQLLEIMPVANSSA----YNIVVVALCKAARVDDALELARTMSEKRIPL 178

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
            + +  S++ GL   G I+EAL+++    E   +P +   N LL G C   + D + E+ 
Sbjct: 179 AAGSLDSVLVGLMDSGRIDEALQVY---RENRREPCLVTLNVLLEGFCSRGQVDKARELL 235

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           + M ++   P+E +Y  +++G+     +E +  +  + +L
Sbjct: 236 RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDREL 275



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + G  P    ++S+I+G C  G   EA++IF +MEE  + P  D +N L+  L K + 
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEEC-HSPYPDVYNVLIDSLSKRQE 59

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           T+   ++ Q+M+++G  P+  T+T ++ G+    +++ +  V+ E++ R +
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMI 110


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 227/460 (49%), Gaps = 7/460 (1%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            + +DA    + M+ K    D      L+  LC   ++++ +K++E    +G IP    Y 
Sbjct: 1127 RWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYN 1186

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++  C++G++G  + L+ +ME  G+    VTY SL+  L   G+L +       + ++
Sbjct: 1187 VLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR 1246

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            G  PN   Y+ +++A  K R    AM +L  + A G  P+++++N L+TGLC EG   +A
Sbjct: 1247 GFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 1306

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F R+   +   PN +SY  L+   CM G    A++LL EM G   +P +VT+  LI  
Sbjct: 1307 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHG 1366

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            L   GK   AL V ++M + +  P    YN +I+ LC +  +      L++M  +  +P+
Sbjct: 1367 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPD 1426

Query: 378  EGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            E  Y    +G      +G  ++ F  ++  G   +         +I   C+ G   +A  
Sbjct: 1427 EFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVS---CNAMIKGYCQFGMMSEAIL 1483

Query: 434  LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
             +  M K G  PD +TY+++I G   +G +  AL     M +   KP+V  +++L+ G C
Sbjct: 1484 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1543

Query: 494  KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            K+  TD +  +F  M  +   PN  TYTIL+  +  +D++
Sbjct: 1544 KTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKV 1583



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 186/432 (43%), Gaps = 35/432 (8%)

Query: 121  MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLC 179
            ++ M  +G  P  +    LV      G +G A ++ E++ E YG        N L++ L 
Sbjct: 1064 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLV 1123

Query: 180  MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
                 + + +  D ++ K    + ++   L+     ER V   +KL++     G  P++V
Sbjct: 1124 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1183

Query: 240  SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
             YNVL+ G C+ G     +    ++ +KGF P +V+Y  L+  L  +G  E+   L  EM
Sbjct: 1184 FYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1243

Query: 300  DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 SP +  YN +I +L        A+ +L +M      P   ++N +I  LC EG V
Sbjct: 1244 RKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1303

Query: 360  DLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                  L +   R   PN+ +Y  L                                  I
Sbjct: 1304 RKAEHFLREAIRRELNPNQLSYTPL----------------------------------I 1329

Query: 420  TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
               C +G+   A  LL EM   G TPD  T+ +LI GL + G + EAL +   M E    
Sbjct: 1330 HGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 1389

Query: 480  PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
            PDV+ +N L+ GLCK R    +  + + M+EK   P+E  Y  L++G    + L  + ++
Sbjct: 1390 PDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 1449

Query: 540  LKELQLRQVVSE 551
             + ++ + +  +
Sbjct: 1450 FEFMEHKGICPD 1461



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 199/457 (43%), Gaps = 14/457 (3%)

Query: 84   LQLERMVSKGHK-----------PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
            L LER V +G K           P VV    L+   C+   M + + ++  M + G +P 
Sbjct: 1157 LCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPT 1216

Query: 133  ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
              +Y  L+N L KKG++     L  +M   G+  N   YNS++  LC   +  Q++  L 
Sbjct: 1217 LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILK 1276

Query: 193  RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            ++   G  P+  T++ L+     E  V  A   L + I +   PN +SY  L+ G C  G
Sbjct: 1277 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 1336

Query: 253  RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
                A     ++  +G  P+VV++  L+  L + G+  EA  +  +M      P +  YN
Sbjct: 1337 ELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 1396

Query: 313  ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +LI  L        A  +L+EM++   +P    Y  +I        +    K  + M H+
Sbjct: 1397 VLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHK 1456

Query: 373  RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
               P+  + N +    C  G + EA   + ++  K    P EF Y  VI+   ++G    
Sbjct: 1457 GICPDIVSCNAMIKGYCQFGMMSEAILCMSNM-RKVGCIPDEFTYTTVISGYAKQGNLNG 1515

Query: 431  AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
            A + L +M K    P+  TYSSLI G C  G  + A  +F  M+     P+V  +  L+ 
Sbjct: 1516 ALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIG 1575

Query: 491  GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
             L K  +   +   F+ M+     PN+ T   LV G+
Sbjct: 1576 SLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1612



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 193/428 (45%), Gaps = 16/428 (3%)

Query: 82   AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            A + L++M + G  PD++    L+  LC    ++KA   +   +   + P+  SYT L++
Sbjct: 1271 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 1330

Query: 142  CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
              C +G +  A  L+ +M   G+  + VT+ +L+ GL + G ++++L   +++ ++ + P
Sbjct: 1331 GFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 1390

Query: 202  NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
            +   Y+ L+    K+R + AA  +L++++ K  +P+   Y  L+ G  +     +A + F
Sbjct: 1391 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1450

Query: 262  RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
              +  KG  P++VS N +++  C  G   EA   ++ M      P   TY  +I   A  
Sbjct: 1451 EFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1510

Query: 322  GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            G  + AL+ L +M+K + +P+  +Y+ +I   C  G  D        M      PN  TY
Sbjct: 1511 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTY 1570

Query: 382  NGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL------------CRKGKT 428
              L   L    KV  A    +++     S       Y++  L            C   + 
Sbjct: 1571 TILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEV 1630

Query: 429  YQAFQLLYEMTKYGFT---PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            +    LL    K  F    P +  Y+++I  LC   ++ EAL+    M +  Y P+   F
Sbjct: 1631 HGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 1690

Query: 486  NALLLGLC 493
             +LL G C
Sbjct: 1691 LSLLYGFC 1698



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 211/504 (41%), Gaps = 51/504 (10%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R   +    L L  M +KG  P +V   +L+  L K   ++K   +   M   G  P+  
Sbjct: 1194 RRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1253

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             Y  +++ LCK  +   AM ++++M   G   + +T+N+L+ GLC  G++ ++  FL   
Sbjct: 1254 IYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1313

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            I++ L PN  +Y+ L+        +  A  LL +++ +G  P++V++  L+ GL   G+ 
Sbjct: 1314 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1373

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--------------- 299
             EA+     +  +   P+V  YN+L+  LC +     A  +L EM               
Sbjct: 1374 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1433

Query: 300  -DGGDRS-------------------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
             DG  RS                   P IV+ N +I      G    A+  +  M K   
Sbjct: 1434 IDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1493

Query: 340  RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
             P   +Y  +I+    +G ++  ++ L  M  R+CKPN  TY+ L    C  G    A  
Sbjct: 1494 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEG 1553

Query: 399  IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL- 457
            +  ++  +  S     Y  +I SL +K K  +A      M     +P+  T   L+ GL 
Sbjct: 1554 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLT 1613

Query: 458  -----------CMEGLIEEALEIFVVMEEYDYK---PDVDNFNALLLGLCKSRRTDLSLE 503
                       C    +     + VV ++  +    P    +NA++  LC+      +L+
Sbjct: 1614 SCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALD 1673

Query: 504  VFQMMIEKGQMPNETTYTILVEGI 527
                M +KG +PN  T+  L+ G 
Sbjct: 1674 FKNRMAKKGYVPNPITFLSLLYGF 1697



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 174/376 (46%), Gaps = 19/376 (5%)

Query: 86   LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            L  M+ +GH PDVV    L++ L  A K+ +A+ V E M    + PD + Y  L++ LCK
Sbjct: 1345 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1404

Query: 146  KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            K  +  A  ++E+M +     +   Y +L+ G     NL  + +  + +  KG+ P+  +
Sbjct: 1405 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVS 1464

Query: 206  YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
             + +++   +   +  A+  + ++   G  P+  +Y  +++G  K+G    A+R+  D+ 
Sbjct: 1465 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 1524

Query: 266  SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             +  +PNVV+Y+ L+   C  G  + A  L A M     SP +VTY ILIGSL    K  
Sbjct: 1525 KRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVL 1584

Query: 326  HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
             A    + M+     P+  + + ++  L S         C   + +  C      +   A
Sbjct: 1585 RAGLYFETMLLNHCSPNDVTLHYLVNGLTS---------CTPCVINSICCNTSEVHGKDA 1635

Query: 386  MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            +L    K      ++  +G+ +NS+    Y  +I SLCR     +A      M K G+ P
Sbjct: 1636 LLVVFKK------LVFDIGDPRNSA----YNAIIFSLCRHNMLREALDFKNRMAKKGYVP 1685

Query: 446  DSYTYSSLIRGLCMEG 461
            +  T+ SL+ G C  G
Sbjct: 1686 NPITFLSLLYGFCSVG 1701



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 162/332 (48%), Gaps = 18/332 (5%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K+++A +  E+M  +   PDV     L+  LCK   +  A  ++E M+   + PD   Y 
Sbjct: 1372 KVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYA 1431

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++   +  N+G A ++ E ME  G   + V+ N++++G C  G +++++  +  + + 
Sbjct: 1432 TLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKV 1491

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            G +P+ FTY+ ++    K+  ++ A++ L D+I +  KPN+V+Y+ L+ G CK G T+ A
Sbjct: 1492 GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFA 1551

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               F ++ ++   PNVV+Y IL+ SL  + +   A      M     SP  VT + L+  
Sbjct: 1552 EGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 1611

Query: 318  LA----------------YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
            L                  HGK D  L V  ++V     P  ++YN II  LC    +  
Sbjct: 1612 LTSCTPCVINSICCNTSEVHGK-DALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLRE 1670

Query: 362  VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
             +   ++M  +   PN  T+  L    C VGK
Sbjct: 1671 ALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 121/290 (41%), Gaps = 32/290 (11%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R   L DA    E M  KG  PD+V    ++   C+   M +AI  M  M   G IPD  
Sbjct: 1439 RSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEF 1498

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +YT +++   K+GN+  A++ +  M       N VTY+SL+ G C  G+ + +      +
Sbjct: 1499 TYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANM 1558

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              + L PN  TY+ L+ + +K+  V  A    + ++     PN V+ + L+ GL      
Sbjct: 1559 QAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL------ 1612

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM------DGGDRSPTI 308
                            P V++      S+C         + L  +      D GD  P  
Sbjct: 1613 ------------TSCTPCVIN------SICCNTSEVHGKDALLVVFKKLVFDIGD--PRN 1652

Query: 309  VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
              YN +I SL  H     AL   + M K  + P+  ++  ++   CS GK
Sbjct: 1653 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 4/263 (1%)

Query: 289  WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR--PSAASY 346
            ++  ++ L  M     +PT      L+ + A  G    A K+  E V+ ++   P     
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMC-ERVREQYGSLPEVTHC 1115

Query: 347  NPIIARLCSEGKVDLVVKCLDQMFHRRCKP-NEGTYNGLAMLCGVGKVQEAFAIIQSLGN 405
            N ++  L  + + D   K  D+M  +     N  T   +  LC   +V+E   +I++   
Sbjct: 1116 NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1175

Query: 406  KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                    FY  +I   CR+G   +   LL EM   GF P   TY SLI  L  +G +E+
Sbjct: 1176 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEK 1235

Query: 466  ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
               +F+ M +  + P+V  +N+++  LCK R    ++ + + M   G  P+  T+  L+ 
Sbjct: 1236 IGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLIT 1295

Query: 526  GIAHQDELELSAEVLKELQLRQV 548
            G+ H+  +  +   L+E   R++
Sbjct: 1296 GLCHEGHVRKAEHFLREAIRREL 1318


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 238/512 (46%), Gaps = 39/512 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGI 129
           D   R  +L+ AF     ++ +G K DV+  ++LL  LC A +  +A+ V+   M   G 
Sbjct: 111 DCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGC 170

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           +PDA SY+ ++  +C  G   +A+ ++     +  G P N V Y+++V GL   G + ++
Sbjct: 171 VPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEA 230

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                 + Q+G+ PN  TY+ ++ A  K R V  A  +L  ++  G +P+ V+YN L+ G
Sbjct: 231 CDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHG 290

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               G+ ++A+R F+++ S+G  PN V+ +  +  LC  GR EEA E    M        
Sbjct: 291 YSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLN 350

Query: 308 IVTY-----------------------------------NILIGSLAYHGKTDHALKVLD 332
           I++Y                                   NIL+   A  G    A+ + +
Sbjct: 351 IISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFE 410

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
           +M K    P   +Y  +I   C  G +D  +   + M  +  +PN   Y  L    C  G
Sbjct: 411 DMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHG 470

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            + +A  ++  + NK        +  +I  LC++G+ ++A ++   + + G   D   ++
Sbjct: 471 DLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFT 530

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SLI G C+ G + EA  +   M     +PD+  +  L+ G CK+ R D  L +F+ ++ K
Sbjct: 531 SLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHK 590

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           G  P   TY I+++G+ H      + E+ +E+
Sbjct: 591 GVKPTTFTYGIILDGLFHAGRTAAAKEMFQEM 622



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 225/469 (47%), Gaps = 2/469 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +MV  G +PD V    L++      + K+A+++ + M S G+IP+  + +  V  LCK
Sbjct: 269 LRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCK 328

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +  + M   G+  N ++Y++L+ G    G L       + +++ G+VPN   
Sbjct: 329 HGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHV 388

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+    K   V  AM + +D+  +G  P++++Y  ++   C+ G  ++A+  F  + 
Sbjct: 389 FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI 448

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG EPN   Y  L++  C  G   +A EL+ E+      P I+++  LI  L   G+  
Sbjct: 449 DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVF 508

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++ D +++   +     +  +I   C  GK+    +  D M     +P+  TY  L 
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G++ +   + + L +K        Y  ++  L   G+T  A ++  EM + G  
Sbjct: 569 NGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIA 628

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
               TYS L+ GLC     EEA+ +F  +   + K D+   N ++  + K+RR + +  +
Sbjct: 629 VTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGL 688

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           F  + + G +P   TYTI++E +  +  +E  AE +  + L+  +S ++
Sbjct: 689 FASIPDYGLVPTVQTYTIMMENLIKEGSVE-EAEGVFSVMLKSGLSPTS 736



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 212/470 (45%), Gaps = 36/470 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +A      M  +G  P+VV   ++++ LCKA  + KA  ++  MV +G+ PD  
Sbjct: 223 KEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNV 282

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++     G    A+++ ++M   G   NTVT ++ V  LC  G + ++ +F D +
Sbjct: 283 TYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM 342

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGR 253
           + KG   N  +YS LL   Y   G    M  L +++ + G  PN   +N+L+ G  K G 
Sbjct: 343 LAKGHKLNIISYSTLLH-GYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA+  F D+  +G  P+V++Y  ++ + C  G  ++A +    M      P    Y  
Sbjct: 402 VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC 461

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI     HG    A +++ E+      P   S+  +I  LC EG+V              
Sbjct: 462 LIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVF------------- 508

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
                             + Q  F +I   G K + +    +  +I   C  GK  +AF+
Sbjct: 509 ------------------EAQRIFDMIIRTGEKADVN---IFTSLIDGYCLIGKMSEAFR 547

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M   G  PD  TY +L+ G C  G I++ L +F  +     KP    +  +L GL 
Sbjct: 548 VHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLF 607

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + RT  + E+FQ MIE G      TY+IL+ G+   +  E +  V ++L
Sbjct: 608 HAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 195/418 (46%), Gaps = 37/418 (8%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P   +Y+ L++C C+   +  A      +   G   + +  +SL+RGLC     ++++ 
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 190 FL-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG--KPNLVSYNVLLT 246
            L  R+ + G VP+A +YS +L++   +     A+ +L   + +GG    N+V Y+ ++ 
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           GL KEG+  EA   F ++  +G  PNVV+YN ++ +LC     ++A  +L +M G    P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
             VTYN LI   +  G+   A+++  EM      P+  + +  +A LC  G+++   +  
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339

Query: 367 DQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           D M  +  K N  +Y+ L            +A    L +  N                  
Sbjct: 340 DSMLAKGHKLNIISYSTLL---------HGYATAGCLVDMSN------------------ 372

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
                  L   M + G  P+ + ++ L+ G    G++ EA+ IF  M++    PDV  + 
Sbjct: 373 -------LFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYL 425

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           A++   C+    D +++ F  MI+KG  PN   Y  L++G     +L  + E++ E++
Sbjct: 426 AVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIR 483



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 196/442 (44%), Gaps = 17/442 (3%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M++KGHK +++  + LL+    A  +     +  +MV  GI+P+   +  LVN   K
Sbjct: 339 FDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAK 398

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  AM + E M+  G   + +TY +++   C +G+++ ++   + +I KG+ PN   
Sbjct: 399 CGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAV 458

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L++       +  A +L+ +I  KG  P ++S+  L+  LCKEGR  EA R F  + 
Sbjct: 459 YQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMII 518

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G + +V  +  L+   C+ G+  EA  +   M      P IVTY  L+     +G+ D
Sbjct: 519 RTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRID 578

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
             L +  E++    +P+  +Y  I+  L   G+     +   +M          TY+ L 
Sbjct: 579 DGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILL 638

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC     +EA  + Q L              +I+ + +  +  +A  L   +  YG  
Sbjct: 639 TGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLV 698

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P   TY+ ++  L  EG +EEA  +F VM +    P     N ++               
Sbjct: 699 PTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIV--------------- 743

Query: 505 FQMMIEKGQMPNETTYTILVEG 526
            + ++EKG++     Y   V+G
Sbjct: 744 -RTLLEKGEIVKAGIYMCRVDG 764



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 113/254 (44%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++AF   + MVS G +PD+V    L+   CK  ++   + +   ++  G+ P   +Y 
Sbjct: 541 KMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYG 600

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ L   G    A ++ ++M + G      TY+ L+ GLC      +++    +L   
Sbjct: 601 IILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAM 660

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            +  +    + ++   +K R    A  L   I   G  P + +Y +++  L KEG  EEA
Sbjct: 661 NVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEA 720

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +   G  P     N+++R+L  +G   +A   +  +DG        T ++L+  
Sbjct: 721 EGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSL 780

Query: 318 LAYHGKTDHALKVL 331
            +  GK    L +L
Sbjct: 781 FSCKGKHREHLNLL 794



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 1/146 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R++   +A    +++ +   K D+V    ++  + KA + ++A  +   +   G++P   
Sbjct: 643 RNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQ 702

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT ++  L K+G+V  A  +   M   G    +   N +VR L   G + ++  ++ R+
Sbjct: 703 TYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRV 762

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVH 220
             K ++  A T S LL + +  +G H
Sbjct: 763 DGKSILFEASTASMLL-SLFSCKGKH 787


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 229/426 (53%), Gaps = 13/426 (3%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+ V     +   C+   + +A+++++ M   G  PD   Y+ L+N   ++G+V  A+ L
Sbjct: 40  PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 99

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +  M       NTV YN+ ++GLC+        + +  +++KG  PN  T+S L+ +  +
Sbjct: 100 LNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 156

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              V +A+++L+ +   G +P+ V+YN+++  L + GR ++A+R    +  K   P+ + 
Sbjct: 157 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALG 213

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +N +L+  C   RW +A+EL+A+M   D     +T+NILI  L  +G  ++A +V ++M 
Sbjct: 214 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 273

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
           + R  P   +Y+ ++     +G V++ ++    M    CKP+  +YN  L  LC   + +
Sbjct: 274 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWE 330

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A  +I  +  K     +  +  +I SLC+KG   +A ++L +M  YG TPD +TY++LI
Sbjct: 331 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 390

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G   +G +++AL++   M     KPD  ++N+ L GLC++ R   + E+   M+     
Sbjct: 391 NGFSEQGRLDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCT 447

Query: 515 PNETTY 520
           PNE T+
Sbjct: 448 PNEVTF 453



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 204/378 (53%), Gaps = 10/378 (2%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +T TYN++++GLC+     ++ + +  +I+    PN  T++  + +  +   +  A++LL
Sbjct: 6   DTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLL 65

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           D +   G  P++V Y+ L+ G  ++G  ++A+     +  K   PN V YN  L+ LC+ 
Sbjct: 66  DQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIA 122

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            RWE+  EL+AEM     SP   T+++LI SL  +   D A++VL++M K    P   +Y
Sbjct: 123 ERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNY 182

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGN 405
           N II  L   G+VD  ++ L+ M    CKP+   +N  L   C   +  +A  +I  +  
Sbjct: 183 NIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFR 239

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                 +  +  +I  LC+ G    A Q+  +M +Y  TPD  TYSSL+ G   +GL+E 
Sbjct: 240 DDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEV 299

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A+++F  M     KPD+ ++NA+L GLC++ R + + E+   M+ K   PNE T+ IL+ 
Sbjct: 300 AIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILIN 356

Query: 526 GIAHQDELELSAEVLKEL 543
            +  +  ++ + EVL+++
Sbjct: 357 SLCQKGLVDRAIEVLEQM 374



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 204/419 (48%), Gaps = 10/419 (2%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + PD  +Y  ++  LC       A +L+ +M     P N VT+ + +R  C  G L++++
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           Q LD++ + G  P+   YS L+    ++  V  A+ LL+ ++ K   PN V YN  L GL
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGL 119

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C   R E+      ++  KG  PN  ++++L+ SLC     + A E+L +M+     P  
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           V YNI+I SL+  G+ D AL++L+ MV    +P A  +N ++   C   +     + + Q
Sbjct: 180 VNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQ 236

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           MF   C   E T+N L  MLC  G V  A  + + +   + +     Y  ++     +G 
Sbjct: 237 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGL 296

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A QL   M      PD ++Y+++++GLC     E+A E+   M   D  P+   FN 
Sbjct: 297 VEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNI 353

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           L+  LC+    D ++EV + M   G  P+  TY  L+ G + Q  L+ + ++L  +  +
Sbjct: 354 LINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK 412



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 182/359 (50%), Gaps = 45/359 (12%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP+ V     L  LC A + +   ++M  MV  G  P+ ++++ L++ LC+   V  A++
Sbjct: 106 KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 165

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           ++E+ME YG   +TV YN ++  L   G ++ +L+ L+ ++ K   P+A  ++ +L+   
Sbjct: 166 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFC 222

Query: 215 KERGVHAAMKL------------------LDDIIAKGG-----------------KPNLV 239
           +    H A +L                  L D++ + G                  P++V
Sbjct: 223 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 282

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +Y+ LL G  ++G  E AI+ FR +P K   P++ SYN +L+ LC   RWE+A EL+AEM
Sbjct: 283 TYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEM 339

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            G D  P  VT+NILI SL   G  D A++VL++M      P   +YN +I     +G++
Sbjct: 340 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 399

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           D  +K L  M    CKP+  +YN  L  LC   + Q+A  ++  +   + +  +  +KY
Sbjct: 400 DDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKY 455



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 155/307 (50%), Gaps = 9/307 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +++ ++ A   LE+M   G +PD V    ++  L +  ++  A++++  MV     PDA 
Sbjct: 156 QNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDAL 212

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  ++   C+      A +L+ +M     P   +T+N L+  LC  G +N + Q  +++
Sbjct: 213 GFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQM 272

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +    P+  TYS LL    ++  V  A++L   +     KP++ SYN +L GLC+  R 
Sbjct: 273 PRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPC---KPDIFSYNAVLKGLCRAARW 329

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A     ++  K   PN V++NIL+ SLC +G  + A E+L +M     +P I TYN L
Sbjct: 330 EDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNAL 389

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  G+ D ALK+L  M     +P A SYN  +  LC   +     + + +M   +C
Sbjct: 390 INGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKC 446

Query: 375 KPNEGTY 381
            PNE T+
Sbjct: 447 TPNEVTF 453



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 3/134 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  DA   +  MV K   P+ V    L+  LC+   + +AI+V+E M + G  PD  
Sbjct: 325 RAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIF 384

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N   ++G +  A++L+  M       + ++YNS ++GLC       + + +  +
Sbjct: 385 TYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEM 441

Query: 195 IQKGLVPNAFTYSF 208
           ++    PN  T+ +
Sbjct: 442 LRNKCTPNEVTFKY 455


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 239/472 (50%), Gaps = 19/472 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A   L +M+ +   P ++   +L++  CK N ++ A +++ +M  +G++PD  
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW 475

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+  ++ LCK+G V  A  L + ++  G   N V Y +L+ G C +G ++ +   L+R+
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +    +PN++TY+ L+E   KE+ +  A  L+  ++  G KP +V+Y +L+  + K+G  
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAF 595

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A++ F  + S G++P+V +Y   L +   +G  EE ++++A+M+     P +VTY +L
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV--------------- 359
           I   A  G T  A   L  MV    +PS    + +I  L  E ++               
Sbjct: 656 IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNT 715

Query: 360 ---DLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
              ++ +K  ++M    C  +   Y  L A  C   +++EA  ++  +  +  S  ++ Y
Sbjct: 716 LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 775

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             ++   C+ G   +A +L+  M + G  P   +Y  L+ GL +EG  E+A  +F  +  
Sbjct: 776 NSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLS 835

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
             Y  D   +  L+ GL K    D   E+  +M EKG  PN  TY++L+EG+
Sbjct: 836 CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 199/381 (52%), Gaps = 2/381 (0%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  T+N++V G C +GN+ ++  +  +++Q GL P+ FTY+ L+    + +GV  A ++ 
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             +  KG + N VSY  L+ GLC+ GR  EA++ F D+      P V +Y +L+ +L   
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGS 312

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GR  EA  L  EM      P + TY +LI  L    K D A K+L EM +    PS  +Y
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN 405
           N +I   C EG +D   + LD M    C PN  TYN L   LC   KV +A A++  +  
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           ++ S     Y  +I   C+      A++LL  M + G  PD +TYS  I  LC EG +EE
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A  +F  ++    K +   + AL+ G CK  + D++  + + M+    +PN  TY +L+E
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552

Query: 526 GIAHQDEL-ELSAEVLKELQL 545
           G+  + ++ E S+ V K L +
Sbjct: 553 GLCKEKKMKEASSLVAKMLTM 573



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 231/479 (48%), Gaps = 25/479 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +++K+++A   L  M  KG  P VV    L+   CK   +  A +++++M S+   
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L+  LCKK  V  AM L+ KM +     + +TYNSL+ G C + +L  + + 
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + + GLVP+ +TYS  ++   KE  V  A  L D + AKG K N V Y  L+ G CK
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A      + +    PN  +YN+L+  LC E + +EA+ L+A+M      PT+VT
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ILIG +   G  DHALKV + MV   ++P   +Y   +    S+G ++ V   + +M 
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641

Query: 371 HRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
                P+  TY    +G A L   G    AF  ++ + +            +I +L  + 
Sbjct: 642 EEGILPDLVTYTVLIDGYARL---GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHEN 698

Query: 427 KTYQ------------------AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +  +                  A +L  +M ++G T D   Y +LI G C +  +EEA  
Sbjct: 699 RMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQG 758

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +   M+E    P  D +N+LL   CK      ++ +   M+E G +P   +Y +LV G+
Sbjct: 759 LVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 817



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 221/450 (49%), Gaps = 1/450 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P++     ++   CK   + +A      +V +G+ PD  +YT L+   C+   V  A ++
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
              M   G   N V+Y +L+ GLC  G +N++L+    + +    P   TY+ L+ A   
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG 311

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                 A+ L +++  KG +PN+ +Y VL+ GLCKE + +EA +   ++  KG  P+VV+
Sbjct: 312 SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT 371

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN L+   C EG  ++A E+L  M+     P   TYN LI  L    K   A+ +L++M+
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
           + +  PS  +YN +I   C    ++   + L  M      P++ TY+  +  LC  G+V+
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  +  S+  K   + +  Y  +I   C+ GK   A+ LL  M      P+SYTY+ LI
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC E  ++EA  +   M     KP V  +  L+  + K    D +L+VF  M+  G  
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
           P+  TYT  +     Q  LE   +V+ ++ 
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 227/461 (49%), Gaps = 1/461 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  +++A+     M  KG + + V  TNL++ LC+A ++ +A+K+   M      P   
Sbjct: 241 RNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVR 300

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+  L   G    A+ L  +M++ G   N  TY  L+ GLC    ++++ + L  +
Sbjct: 301 TYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM 360

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KGL+P+  TY+ L++   KE  +  A ++LD + +    PN  +YN L+ GLCK+ + 
Sbjct: 361 SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKV 420

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+     +  +   P++++YN L+   C     E A  LL+ M+     P   TY++ 
Sbjct: 421 HKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVF 480

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   G+ + A  + D +     + +   Y  +I   C  GK+D+    L++M +  C
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN L   LC   K++EA +++  +           Y  +I  + + G    A +
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M   G+ PD  TY++ +     +G++EE  ++   M E    PD+  +  L+ G  
Sbjct: 601 VFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYA 660

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +   T  + +  + M++ G  P+    +IL++ ++H++ ++
Sbjct: 661 RLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 220/450 (48%), Gaps = 3/450 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A L   ++V  G  PD    T+L+   C+   +  A +V  +M   G   +  SYT L+
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 141 NCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           + LC+ G +  A++L   M ED   PT   TY  L+  L   G   ++L   + + +KG 
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPT-VRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PN  TY+ L++   KE  +  A K+L ++  KG  P++V+YN L+ G CKEG  ++A  
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFE 390

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               + S    PN  +YN L+  LC + +  +A  LL +M     SP+++TYN LI    
Sbjct: 391 ILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQC 450

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                + A ++L  M +    P   +Y+  I  LC EG+V+      D +  +  K NE 
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            Y  L    C VGK+  A+++++ + N         Y  +I  LC++ K  +A  L+ +M
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  P   TY+ LI  +  +G  + AL++F  M    Y+PDV  + A L         
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   +V   M E+G +P+  TYT+L++G A
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYA 660



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 187/419 (44%), Gaps = 37/419 (8%)

Query: 139 LVNCLCKKGNVGYAMQLVEKME---DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           ++   C   +V + +++  KM    ++ +      YN+++  L     +++       L+
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              + PN +T++ ++    K   V  A      I+  G  P+  +Y  L+ G C+    +
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A   F  +P KG + N VSY  L+  LC  GR  EA +L A+M   +  PT+ TY +LI
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            +L+  G+   AL + +EM +    P+  +Y  +I  LC E K+D   K L +M  +   
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           P+  TYN L                                  I   C++G    AF++L
Sbjct: 367 PSVVTYNAL----------------------------------IDGYCKEGMIDDAFEIL 392

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M      P++ TY+ LI GLC +  + +A+ +   M E    P +  +N+L+ G CK 
Sbjct: 393 DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKV 452

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
              + +  +  +M E G +P++ TY++ ++ +  +  +E +  +   ++ + V +   +
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 217/432 (50%), Gaps = 1/432 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF    +++  G+ PD +  T L   LC   ++++A    + +V+ G   D  SY  L++
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G    A+ L+++++      N V YN+++  +C +  +N++      ++ KG+ P
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISP 258

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TYS L+        +  A+ L + +I +  KP++ ++N+L+   CK+G+ +E    F
Sbjct: 259 DVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G +PN V+YN L+   C+     +A  +   M  G  +P I +Y+I+I      
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            K D A+ +  EM +    P   +Y+ +I  L   G++   ++ +DQM  R   PN  TY
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTY 438

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N  L  LC   +V +A A++    +K        Y  +I  LC+ GK   A ++  ++  
Sbjct: 439 NSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLV 498

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G+  D Y Y+ +I+G C+EGL  EAL +   ME+    PD   +  ++L L K    D+
Sbjct: 499 KGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDM 558

Query: 501 SLEVFQMMIEKG 512
           + ++ + MI +G
Sbjct: 559 AEKLLREMIARG 570



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 232/461 (50%), Gaps = 1/461 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  +G KP++V    L+   C+   +  A  V   ++  G +PD  ++T L   LC K
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A    +K+   G+  + ++Y +L+ GLC +G    +L  L R+    + PN   Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++++  K + V+ A  L  ++++KG  P++V+Y+ L++G C  G+ ++AI  F  +  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +  +P+V ++NIL+ + C +G+ +E   +   M      P  VTYN L+       + + 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A  + + M +G   P   SY+ +I   C   K D  +    +M  +   P+  TY+ L  
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            L   G++  A  ++  + ++        Y  ++ +LC+  +  +A  LL +    GF P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  TYS LI+GLC  G +E+A ++F  +    Y  DV  +  ++ G C     + +L + 
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             M + G +P+  TY I++  +  +DE +++ ++L+E+  R
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/536 (23%), Positives = 257/536 (47%), Gaps = 4/536 (0%)

Query: 26  YSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKP-GNNNDTRHRDHKLNDAFL 84
           Y  +P+ H         + L +T     P  S  +K N     + + T H ++ ++DA  
Sbjct: 14  YCVVPDSHFVPKKFQSFQFLKNTHFNFIPYSS--SKINFISYSSTSTTFHSNNDVDDAVS 71

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
              R++ +   P   +   +L  L K+      + + + M   GI P+  +   L+NC C
Sbjct: 72  LFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFC 131

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           + G + +A  +  K+   GY  +T+T+ +L +GLC+ G + Q+  F D+++  G   +  
Sbjct: 132 QLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQI 191

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           +Y  L+    K     AA+ LL  +     +PN+V YN ++  +CK     EA   F ++
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            SKG  P+VV+Y+ L+   C+ G+ ++A +L  +M   +  P + T+NIL+ +    GK 
Sbjct: 252 VSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKM 311

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
                V D M+K   +P+  +YN ++   C   +V+      + M      P+  +Y+ +
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIM 371

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C + K  EA  + + +  K        Y  +I  L + G+   A QL+ +M   G 
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+  TY+S++  LC    +++A+ +    ++  ++PD+  ++ L+ GLC+S + + + +
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           VF+ ++ KG   +   YTI+++G   +     +  +L +++    + ++    +++
Sbjct: 492 VFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 146/261 (55%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+ +     + M+ +G KP+ V   +L+   C   ++ KA  +   M   G+ PD  
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY+ ++N  CK      AM L ++M       + VTY+SL+ GL   G ++ +LQ +D++
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+ PN  TY+ +L+A  K   V  A+ LL     KG +P++ +Y++L+ GLC+ G+ 
Sbjct: 427 HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKL 486

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A + F DL  KG+  +V +Y I+++  C+EG + EA  LL++M+     P   TY I+
Sbjct: 487 EDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 315 IGSLAYHGKTDHALKVLDEMV 335
           I SL    + D A K+L EM+
Sbjct: 547 ILSLFKKDENDMAEKLLREMI 567



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 35/329 (10%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N+AF     MVSKG  PDVV  + L+   C   K+K AI +   M+   I PD  ++  
Sbjct: 241 VNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI 300

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LVN  CK G +     + + M   G   N VTYNSL+ G C++  +N++    + + Q G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 199 -----------------------------------LVPNAFTYSFLLEAAYKERGVHAAM 223
                                              ++P+  TYS L++   K   +  A+
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L+D +  +G  PN+ +YN +L  LCK  + ++AI        KGF+P++ +Y+IL++ L
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G+ E+A ++  ++     +  +  Y I+I      G  + AL +L +M      P A
Sbjct: 481 CQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDA 540

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +Y  II  L  + + D+  K L +M  R
Sbjct: 541 KTYEIIILSLFKKDENDMAEKLLREMIAR 569



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 108/206 (52%), Gaps = 2/206 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A    + M  K   PDVV  ++L+  L K+ ++  A+++++ M   G+ P+  +Y 
Sbjct: 380 KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYN 439

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A+ L+ K +D G+  +  TY+ L++GLC  G L  + +  + L+ K
Sbjct: 440 SILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVK 499

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   + + Y+ +++    E   + A+ LL  +   G  P+  +Y +++  L K+   + A
Sbjct: 500 GYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSL 283
            +  R++ ++G   N   Y++ L  L
Sbjct: 560 EKLLREMIARGLPLNF--YDLYLTRL 583



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 97/180 (53%), Gaps = 2/180 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +++ A   +++M  +G  P++    ++L  LCK +++ KAI ++      G  
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQ 467

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD S+Y+ L+  LC+ G +  A ++ E +   GY  +   Y  +++G C+ G  N++L  
Sbjct: 468 PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALAL 527

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L ++   G +P+A TY  ++ + +K+     A KLL ++IA+G   N   Y++ LT L +
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF--YDLYLTRLAQ 585


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 240/511 (46%), Gaps = 42/511 (8%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIP 131
           R R   L  AF+   R++  G K   +QAT  L  LC A +  +A+ V+   M     +P
Sbjct: 136 RARRPDLGPAFVA--RLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVP 193

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           DA SY  ++  LC       A+ +V++M   G     + V++N+++ G    G ++++  
Sbjct: 194 DAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 253

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             + ++QKG+VP+  TY+ +++A  K R +  A  +L  ++ KG +P+ V+YN ++ G  
Sbjct: 254 LFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYS 313

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
             G  +E+ + FR + SKG  P+ V+++  + SLC  GR ++A E+   M      P IV
Sbjct: 314 CSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIV 373

Query: 310 TY-----------------------------------NILIGSLAYHGKTDHALKVLDEM 334
           +Y                                   NILI + A  G  D A+ V  EM
Sbjct: 374 SYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEM 433

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
                RP+  +Y+ +I+  C  G++   ++   QM     +PN   Y+ L    C  G +
Sbjct: 434 QGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDL 493

Query: 394 QEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            +A   I  + +K    P   F+  +I SLC +G+   A  +   +   G  P   T++S
Sbjct: 494 VKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNS 553

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI G C+ G +E+A  +   M     +PDV   N L+ G CKS + D  L +F+ M+ K 
Sbjct: 554 LIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKK 613

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             P   TY I+++G+        + ++  E+
Sbjct: 614 VKPTTVTYNIVLDGLLRAGRTSAAKKMFHEM 644



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 228/466 (48%), Gaps = 2/466 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   ++ A   L +MV KG +PD V    +++    +   K++ K+   M S G+I
Sbjct: 275 DALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLI 334

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++  ++ LCK G    A ++ + M   G+  + V+Y+ L+ G    G        
Sbjct: 335 PDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNL 394

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG+V N    + L+ A  K   +  AM +  ++  +G +PN+V+Y+ L++  C+
Sbjct: 395 FHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCR 454

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIV 309
            GR  +A+  F  + S G EPN   Y+ L+   CM G   +A E ++EM   G   P IV
Sbjct: 455 MGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIV 514

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            ++ +I SL   G+   A  V + ++    RP+  ++N +I   C  GK++     LD M
Sbjct: 515 FFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM 574

Query: 370 FHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                +P+  T N L +  C  GK+ +   + + + +K+       Y  V+  L R G+T
Sbjct: 575 VSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRT 634

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A ++ +EM   G   D  TY  L++GLC   L +EA+ +F  +   D K D+   N +
Sbjct: 635 SAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTM 694

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +  L K RR + + ++F  +   G +PN +TY +++  +  +  +E
Sbjct: 695 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVE 740



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 227/466 (48%), Gaps = 16/466 (3%)

Query: 76  DHKLNDAFLQLERMVSKGHK--PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           D +  +A   ++RM  +G +  PDVV    +++   K  ++ KA  +   MV  G++PD 
Sbjct: 208 DSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDV 267

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  +V+ LCK   +  A  ++ +M D G   + VTYN+++ G    G+  +S +   +
Sbjct: 268 GTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRK 327

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  KGL+P+  T+S  + +  K      A ++   +  KG  P++VSY++LL G   EGR
Sbjct: 328 MTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGR 387

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +    F  +  KG   N    NIL+ +    G  +EA  +  EM G    P +VTY+ 
Sbjct: 388 FADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYST 447

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQM 369
           LI +    G+   A++   +M+     P+ A Y+ +I   C  G +    + + + + + 
Sbjct: 448 LISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKG 507

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKV---QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            HR   PN   ++ +   LC  G+V   Q+ F ++  +G++        +  +I   C  
Sbjct: 508 LHR---PNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVT---FNSLIDGYCLV 561

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +AF +L  M   G  PD  T ++L+ G C  G I++ L +F  M     KP    +
Sbjct: 562 GKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTY 621

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           N +L GL ++ RT  + ++F  MI+ G   +  TY IL++G+   D
Sbjct: 622 NIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRND 667



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 212/479 (44%), Gaps = 55/479 (11%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
             +M SKG  PD V  ++ +  LCK  + K A ++ + M + G +PD  SY+ L++    
Sbjct: 325 FRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYAT 384

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G       L   M D G  +N    N L+      G +++++     +  +G+ PN  T
Sbjct: 385 EGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT 444

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS L+ A  +   +  AM+    +I+ G +PN   Y+ L+ G C  G   +A  F  ++ 
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504

Query: 266 SKGFE-PNVVSYNILLRSLCMEGRWEEANELL-AEMDGGDRSPTIVTYNILIGSLAYHGK 323
           SKG   PN+V ++ ++ SLC+EGR  +A ++    +  GDR PTIVT+N LI      GK
Sbjct: 505 SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDR-PTIVTFNSLIDGYCLVGK 563

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN- 382
            + A  VLD MV     P   + N +++  C  GK+D  +    +M H++ KP   TYN 
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM---- 438
            L  L   G+   A  +   + +   +   + YK ++  LCR   T +A  L +++    
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 683

Query: 439 -------------------------------TKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                                          +  G  P+  TY  +IR L  EG +EEA 
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEAD 743

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            +F  ME+    P     N                ++ +M+++KG +     Y   V+G
Sbjct: 744 TMFSSMEKSGCAPSSRLLN----------------DIIRMLLQKGDIVKAGYYMSKVDG 786



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 163/379 (43%), Gaps = 41/379 (10%)

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR-FFRD 263
           TY  L++   + R        +  ++  G K   +     L  LC   RT+EA+      
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIGSLAYH 321
           +      P+ +SYN +++SLC + R +EA +++  M  +GG  SP +V++N +I      
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G+   A  + +EMV+    P   +YN I+  LC    +D     L QM  +  +P+  TY
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 382 NGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           N +     C  G  +E+  + + + +K        +   ++SLC+ G++  A ++   MT
Sbjct: 306 NAIIHGYSCS-GHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMT 364

Query: 440 KYGFTPDSYTYSSLIRGLCME-----------------------------------GLIE 464
             G  PD  +YS L+ G   E                                   G+++
Sbjct: 365 TKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMD 424

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+ +F  M+    +P+V  ++ L+   C+  R   ++E F  MI  G  PN   Y  L+
Sbjct: 425 EAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLI 484

Query: 525 EGIAHQDELELSAEVLKEL 543
            G     +L  + E + E+
Sbjct: 485 HGFCMHGDLVKAKEFISEM 503



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 2/324 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDA 133
           R  +L DA  +  +M+S G +P+     +L++  C    + KA + +  M+S G+  P+ 
Sbjct: 454 RMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNI 513

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             ++ +++ LC +G V  A  +   +   G     VT+NSL+ G C++G + ++   LD 
Sbjct: 514 VFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDA 573

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++  G+ P+  T + L+    K   +   + L  +++ K  KP  V+YN++L GL + GR
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A + F ++   G   ++ +Y ILL+ LC     +EA  L  ++   D    I   N 
Sbjct: 634 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 693

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I +L    + + A  +   +      P+ ++Y  +I  L  EG V+        M    
Sbjct: 694 MINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEA 396
           C P+    N +  ML   G + +A
Sbjct: 754 CAPSSRLLNDIIRMLLQKGDIVKA 777



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 89/172 (51%), Gaps = 3/172 (1%)

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L  LC   +  EA  ++    ++ +  P    Y  VI SLC   ++ +A  ++  M K G
Sbjct: 166 LKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 225

Query: 443 --FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
              +PD  +++++I G   +G + +A  +F  M +    PDV  +N+++  LCK+R  D 
Sbjct: 226 GRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDK 285

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           +  V + M++KG  P+  TY  ++ G +     + SA++ +++  + ++ ++
Sbjct: 286 AEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDT 337



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 30/146 (20%), Positives = 71/146 (48%), Gaps = 1/146 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   ++A     ++ +   K D+     ++  L K  + ++A  +   + +SG++P+ S
Sbjct: 665 RNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVS 724

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++  L K+G+V  A  +   ME  G   ++   N ++R L   G++ ++  ++ ++
Sbjct: 725 TYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV 784

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVH 220
               +   A T S L+ + +  +G H
Sbjct: 785 DGTIISLEASTTSLLM-SLFSSKGKH 809


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 232/453 (51%), Gaps = 1/453 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G + D+   T ++   C+  K+  A  V+      G  PD  +++ LVN  C +G V  A
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + LV++M +     + VT ++L+ GLC+ G ++++L  +DR+++ G  P+  TY  +L  
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 248

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K      A+ L   +  +  K ++V Y++++  LCK+G  ++A+  F ++  KG + +
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 308

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV+Y+ L+  LC +G+W++  ++L EM G +  P +VT++ LI      GK   A ++ +
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
           EM+     P   +YN +I   C E  +    +  D M  + C+P+  TY+ L    C   
Sbjct: 369 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 428

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           +V +   + + + +K        Y  ++   C+ GK   A +L  EM   G  P   TY 
Sbjct: 429 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 488

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            L+ GLC  G + +ALEIF  M++      +  +N ++ G+C + + D +  +F  + +K
Sbjct: 489 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 548

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           G  P+  TY +++ G+  +  L  +  + ++++
Sbjct: 549 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 245/487 (50%), Gaps = 1/487 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL  AF  L R    G++PD +  + L+   C   ++ +A+ +++ MV     PD  
Sbjct: 146 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 205

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L+N LC KG V  A+ L+++M +YG+  + VTY  ++  LC  GN   +L    ++
Sbjct: 206 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 265

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ +  +   YS ++++  K+     A+ L +++  KG K ++V+Y+ L+ GLC +G+ 
Sbjct: 266 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 325

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++  +  R++  +   P+VV+++ L+     EG+  EA EL  EM     +P  +TYN L
Sbjct: 326 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           A ++ D MV     P   +Y+ +I   C   +VD  ++   ++  +  
Sbjct: 386 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 445

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN L +  C  GK+  A  + Q + ++        Y  ++  LC  G+  +A +
Sbjct: 446 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 505

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  +M K   T     Y+ +I G+C    +++A  +F  + +   KPDV  +N ++ GLC
Sbjct: 506 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 565

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K      +  +F+ M E G  P++ TY IL+        L  S E+++E+++    ++S+
Sbjct: 566 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 625

Query: 554 VERLVMQ 560
             ++V+ 
Sbjct: 626 TIKMVID 632



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 219/427 (51%), Gaps = 4/427 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A + ++RMV  G +PD V    +L  LCK+     A+ +   M    I      Y+
Sbjct: 219 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 278

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK G+   A+ L  +ME  G   + VTY+SL+ GLC  G  +   + L  +I +
Sbjct: 279 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 338

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++P+  T+S L++   KE  +  A +L +++I +G  P+ ++YN L+ G CKE    EA
Sbjct: 339 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 398

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F  + SKG EP++V+Y+IL+ S C   R ++   L  E+      P  +TYN L+  
Sbjct: 399 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 458

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK + A ++  EMV     PS  +Y  ++  LC  G+++  ++  ++M   R    
Sbjct: 459 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 518

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            G YN +   +C   KV +A+++  SL +K        Y  +I  LC+KG   +A  L  
Sbjct: 519 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 578

Query: 437 EMTKYGFTPDSYTYSSLIRG-LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           +M + G TPD +TY+ LIR  L   GLI  ++E+   M+   +  D      +++ +   
Sbjct: 579 KMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTIK-MVIDMLSD 636

Query: 496 RRTDLSL 502
           RR D S 
Sbjct: 637 RRLDKSF 643



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 226/469 (48%), Gaps = 34/469 (7%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K+NDA    E M+     P  +    L   + +  +    +   + M  +GI  D  +
Sbjct: 77  DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 136

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            T ++NC C+K  + +A  ++ +    GY  +T+T+++LV G C+ G +++++  +DR++
Sbjct: 137 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 196

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +    P+  T S L+     +  V  A+ L+D ++  G +P+ V+Y  +L  LCK G + 
Sbjct: 197 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 256

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+  FR +  +  + +VV Y+I++ SLC +G +++A  L  EM+       +VTY+ LI
Sbjct: 257 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 316

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           G L   GK D   K+L EM+     P   +++ +I     EGK+    +  ++M  R   
Sbjct: 317 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 376

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           P+  TYN L                                  I   C++   ++A Q+ 
Sbjct: 377 PDTITYNSL----------------------------------IDGFCKENCLHEANQMF 402

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M   G  PD  TYS LI   C    +++ + +F  +      P+   +N L+LG C+S
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 462

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + + + E+FQ M+ +G  P+  TY IL++G+    EL  + E+ +++Q
Sbjct: 463 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 165/326 (50%), Gaps = 2/326 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D   +DA      M  KG K DVV  ++L+  LC   K     K++  M+   II
Sbjct: 282 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 341

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++ L++   K+G +  A +L  +M   G   +T+TYNSL+ G C    L+++ Q 
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG  P+  TYS L+ +  K + V   M+L  +I +KG  PN ++YN L+ G C+
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+   A   F+++ S+G  P+VV+Y ILL  LC  G   +A E+  +M     +  I  
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI+I  +    K D A  +   +     +P   +YN +I  LC +G +        +M 
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581

Query: 371 HRRCKPNEGTYNGL--AMLCGVGKVQ 394
              C P++ TYN L  A L G G + 
Sbjct: 582 EDGCTPDDFTYNILIRAHLGGSGLIS 607



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 7/195 (3%)

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL--GNKQNSSPQEFY 415
           KV+  +   + M   R  P    +N    LC      + + ++     G + N    + Y
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFN---RLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 135

Query: 416 K--YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
               +I   CRK K   AF +L    K G+ PD+ T+S+L+ G C+EG + EA+ +   M
Sbjct: 136 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 195

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            E   +PD+   + L+ GLC   R   +L +   M+E G  P+E TY  ++  +      
Sbjct: 196 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 255

Query: 534 ELSAEVLKELQLRQV 548
            L+ ++ ++++ R +
Sbjct: 256 ALALDLFRKMEERNI 270


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 216/437 (49%), Gaps = 36/437 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G+ P V     +L  L  A+ +  A + +  M+  G+ P+  +Y  LV  LC +G +  A
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLE 211
           + +V  M   G   N VTYN+LV   C  G L+ + + +  + ++G   PN  T++ ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K   +  A K+ D+++ +G  P++VSYN LL+G CK G   E++  F ++  +G  P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +VV++  L+ + C  G  E+A  L+A+M         VT+  LI      G  D AL  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG 391
           +EM K   +PS   YN +I   C  G++DL  + + +M  +R KP+  TY+         
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS--------- 402

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
                                     +I+  C+ G    AFQL  +M K G  PD+ TYS
Sbjct: 403 -------------------------TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 437

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SLIRGLC E  + +A E+F  M +   +PD   +  L+ G CK    + +L +   MI K
Sbjct: 438 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497

Query: 512 GQMPNETTYTILVEGIA 528
           G +P+  TY++L+ G++
Sbjct: 498 GVLPDVVTYSVLINGLS 514



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 237/504 (47%), Gaps = 52/504 (10%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D  L  A   L  M+  G  P+V     L+  LC   ++++A+ V+  M  +G  P+A +
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVT 189

Query: 136 YTYL------------------------------------VNCLCKKGNVGYAMQLVEKM 159
           Y  L                                    VN LCK G +  A ++ ++M
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
              G   + V+YN+L+ G C +G L++SL     + Q+GLVP+  T++ L+ A  K   +
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A+ L+  +  +G + N V++  L+ G CK+G  ++A+    ++   G +P+VV YN L
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +   C  GR + A EL+ EM+     P +VTY+ +I      G  D A ++  +M+K   
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
            P A +Y+ +I  LC E +++   +  + M     +P+E TY  L    C  G V++A +
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS------- 451
           +   +  K        Y  +I  L +  +T +A +LL+++      PD+  Y        
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549

Query: 452 --------SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
                   +L++G CM+GL++EA +++  M + ++K D   ++ L+ G C+      +L 
Sbjct: 550 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 609

Query: 504 VFQMMIEKGQMPNETTYTILVEGI 527
             + M+  G  PN T+   LV G+
Sbjct: 610 FHKQMLRSGFSPNSTSTISLVRGL 633



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 196/397 (49%), Gaps = 16/397 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + MV +G  PDVV    LL   CK   + +++ V   M   G++PD  ++T L++  CK
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCK 305

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A+ LV +M + G   N VT+ +L+ G C  G L+ +L  ++ + + G+ P+   
Sbjct: 306 AGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVC 365

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K   +  A +L+ ++ AK  KP++V+Y+ +++G CK G  + A +  + + 
Sbjct: 366 YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 425

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+ ++Y+ L+R LC E R  +A EL   M      P   TY  LI      G  +
Sbjct: 426 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 485

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL + DEM++    P   +Y+ +I  L    +     + L +++H    P+   Y+ L 
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545

Query: 386 MLCG----------------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           + C                  G ++EA  + QS+ ++        Y  +I   CR G   
Sbjct: 546 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           +A     +M + GF+P+S +  SL+RGL  EG++ EA
Sbjct: 606 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 197/398 (49%), Gaps = 7/398 (1%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           GY  +   YN+++  L    +L  + +FL  +++ G+ PN +TY+ L+ A      +  A
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEPNVVSYNILLR 281
           + ++ D+   G  PN V+YN L+   C+ G  + A R    +  +G  +PN+V++N ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC  GR E A ++  EM     +P +V+YN L+      G    +L V  EM +    P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
              ++  +I   C  G ++  V  + QM  R  + NE T+  L    C  G + +A   +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + +           Y  +I   C+ G+   A +L+ EM      PD  TYS++I G C  
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G ++ A ++   M +    PD   +++L+ GLC+ +R + + E+F+ M++ G  P+E TY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 521 TILVEGIAHQDELE----LSAEVLKELQLRQVVSESAV 554
           T L++G   +  +E    L  E++++  L  VV+ S +
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 114/270 (42%), Gaps = 22/270 (8%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + +LNDA    E M+  G +PD    T L+   CK   ++KA+ + + M+  G++PD  +
Sbjct: 446 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 505

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y+ L+N L K      A +L+ K+       + + Y++L+   C        +  L    
Sbjct: 506 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-CCSKAEFKSVVALLKGFC 564

Query: 196 QKGLVPNA-FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            KGL+  A   Y  +L+  +K          LD  +          Y++L+ G C+ G  
Sbjct: 565 MKGLMKEADKVYQSMLDRNWK----------LDGSV----------YSILIHGHCRGGNV 604

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+ F + +   GF PN  S   L+R L  EG   EA+  + ++              L
Sbjct: 605 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 664

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
           I      G  D  + VL  M +    PS+ 
Sbjct: 665 IDLNRKEGNVDALIDVLCGMARDGLLPSSG 694


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 232/464 (50%), Gaps = 5/464 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA L   RM+     P           LC+  + + A+ ++  M   G +PDA  Y  ++
Sbjct: 163 DALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVI 222

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           + L  +G V  A  L+++M   G   +  T+N +V GLC LG++ ++ + +DR++  G  
Sbjct: 223 HALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCT 282

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY FLL    + R    A  +L  +     + N+V  N ++ G   EG+   A   
Sbjct: 283 PSVVTYGFLLRGLCRTRQADEAYAMLGRV----PEVNVVMLNTVIRGCLAEGKLARATEL 338

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           +  + SKG  P+V +YNIL+  LC  GR   A  +L EM+    +P IVTY+ L+ S   
Sbjct: 339 YEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCR 398

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           +G  D A  +LD+M    F  ++  YN II  L  +GK+D  ++ + +M  + CKP+  T
Sbjct: 399 NGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICT 458

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN +   LC   ++ EA  I  +L  +   +    Y  +I +L   G+  +  +L  EM 
Sbjct: 459 YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV 518

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
            +G   D  +Y+ LI+ LC EG ++ ++ +   M     KP+  ++N L+  LCK+ +  
Sbjct: 519 LHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVR 578

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +LE+ + M+ +G  P+  TY  L+ G+        +  +L++L
Sbjct: 579 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 227/490 (46%), Gaps = 42/490 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA   L  M   G  PD V    +++ L     + +A  +++ M+  G   D +++ 
Sbjct: 195 RARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFN 254

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V  LC  G+V  A +LV++M  +G   + VTY  L+RGLC     +++   L R+ + 
Sbjct: 255 DVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV 314

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               N    + ++     E  +  A +L + + +KG  P++ +YN+L+ GLCK GR   A
Sbjct: 315 ----NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSA 370

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +R   ++  KG  PN+V+Y+ LL S C  G W++A  +L +M     S     YN +I +
Sbjct: 371 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYA 430

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV--------------- 362
           L   GK D A++++ EM     +P   +YN II  LC+  ++D                 
Sbjct: 431 LGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVAN 490

Query: 363 --------------------VKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQ 401
                               ++  ++M    C  +  +YNGL   LC  G V  +  +++
Sbjct: 491 GITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLE 550

Query: 402 SLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            +  K    P  F Y  +I  LC+ GK   A +L  EM   G TPD  TY++LI GLC  
Sbjct: 551 EMMTK-GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKV 609

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G    AL +   +   +  PD+  +N L+   CK R  D +  +    +  G +PNE T+
Sbjct: 610 GWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTW 669

Query: 521 TILVEGIAHQ 530
            ++V+    Q
Sbjct: 670 GMMVQNFVRQ 679



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 197/382 (51%), Gaps = 5/382 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + ++A+  L R+     + +VV    ++       K+ +A ++ EMM S G  PD  
Sbjct: 297 RTRQADEAYAMLGRV----PEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVH 352

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK G  G A++++++ME+ G   N VTY++L+   C  G  + +   LD++
Sbjct: 353 TYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 412

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG   N+  Y+ ++ A  K+  +  AM+L+ ++ ++G KP++ +YN ++  LC   + 
Sbjct: 413 SAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQM 472

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F +L  +G   N ++YN L+ +L   GRW+E   L  EM        +V+YN L
Sbjct: 473 DEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGL 532

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   G  D ++ +L+EM+    +P+  SYN +I  LC  GKV   ++   +M ++  
Sbjct: 533 IKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL 592

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN L   LC VG    A  +++ L N+        Y  +I+  C+      A  
Sbjct: 593 TPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASM 652

Query: 434 LLYEMTKYGFTPDSYTYSSLIR 455
           LL +    G  P+  T+  +++
Sbjct: 653 LLDKAVSGGIVPNERTWGMMVQ 674



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 205/464 (44%), Gaps = 37/464 (7%)

Query: 116 KAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           +A+ +++ M     + P   SY  +++ L +      A+ L  +M     P  T T+   
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
            R LC LG    +L  L  + + G VP+A  Y  ++ A   + GV  A  LLD+++  G 
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC---------- 284
             ++ ++N ++ GLC  G   EA R    +   G  P+VV+Y  LLR LC          
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306

Query: 285 ---------------------MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
                                 EG+   A EL   M      P + TYNIL+  L   G+
Sbjct: 307 MLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGR 366

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              A+++LDEM +    P+  +Y+ ++   C  G  D     LDQM  +    N   YNG
Sbjct: 367 CGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNG 426

Query: 384 LAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           +    G  GK+ EA  ++Q + ++        Y  +I  LC   +  +A  +   + + G
Sbjct: 427 IIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEG 486

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
              +  TY++LI  L   G  +E L +   M  +    DV ++N L+  LCK    D S+
Sbjct: 487 VVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSM 546

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAH----QDELELSAEVLKE 542
            + + M+ KG  PN  +Y +L+  +      +D LELS E+L +
Sbjct: 547 MLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ 590



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 154/362 (42%), Gaps = 33/362 (9%)

Query: 222 AMKLLDDIIAK-GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A+ LLD +  +    P+  SYN +L+ L +     +A+  +R +      P   ++ +  
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           R+LC  GR  +A  LL  M      P  V Y  +I +L   G    A  +LDEM+     
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
               ++N ++  LC  G V    + +D+M    C P+  TY  L   LC   +  EA+A+
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 400 I-------------------------------QSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           +                               + +G+K        Y  ++  LC+ G+ 
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A ++L EM + G  P+  TYS+L+   C  G+ ++A  +   M    +  +   +N +
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +  L K  + D ++ + Q M  +G  P+  TY  ++  + + D+++ +  +   L    V
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGV 487

Query: 549 VS 550
           V+
Sbjct: 488 VA 489



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 6/246 (2%)

Query: 314 LIGSLAYHGKTDHALKVLDEMVKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ++ S+   G  D AL +LD + +  R  P   S    + R    G+    +  LDQM  R
Sbjct: 82  ILASVGAAGDPDRALALLDSLPRSSRLPPLRESLLLPLLRSLPPGRA---LHLLDQMPRR 138

Query: 373 -RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
               P+  +YN +              ++     +    P  F +     +LCR G+   
Sbjct: 139 FAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARD 198

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL  M ++G  PD+  Y ++I  L  +G + EA  +   M       DV+ FN ++L
Sbjct: 199 ALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVL 258

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           GLC       +  +   M+  G  P+  TY  L+ G+    + + +  +L  +    VV 
Sbjct: 259 GLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVM 318

Query: 551 ESAVER 556
            + V R
Sbjct: 319 LNTVIR 324


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 232/453 (51%), Gaps = 1/453 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G + D+   T ++   C+  K+  A  V+      G  PD  +++ LVN  C +G V  A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + LV++M +     + VT ++L+ GLC+ G ++++L  +DR+++ G  P+  TY  +L  
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K      A+ L   +  +  K ++V Y++++  LCK+G  ++A+  F ++  KG + +
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV+Y+ L+  LC +G+W++  ++L EM G +  P +VT++ LI      GK   A ++ +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
           EM+     P   +YN +I   C E  +    +  D M  + C+P+  TY+ L    C   
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           +V +   + + + +K        Y  ++   C+ GK   A +L  EM   G  P   TY 
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            L+ GLC  G + +ALEIF  M++      +  +N ++ G+C + + D +  +F  + +K
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           G  P+  TY +++ G+  +  L  +  + ++++
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 245/487 (50%), Gaps = 1/487 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL  AF  L R    G++PD +  + L+   C   ++ +A+ +++ MV     PD  
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L+N LC KG V  A+ L+++M +YG+  + VTY  ++  LC  GN   +L    ++
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ +  +   YS ++++  K+     A+ L +++  KG K ++V+Y+ L+ GLC +G+ 
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++  +  R++  +   P+VV+++ L+     EG+  EA EL  EM     +P  +TYN L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           A ++ D MV     P   +Y+ +I   C   +VD  ++   ++  +  
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN L +  C  GK+  A  + Q + ++        Y  ++  LC  G+  +A +
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  +M K   T     Y+ +I G+C    +++A  +F  + +   KPDV  +N ++ GLC
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K      +  +F+ M E G  P++ TY IL+        L  S E+++E+++    ++S+
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596

Query: 554 VERLVMQ 560
             ++V+ 
Sbjct: 597 TIKMVID 603



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 219/427 (51%), Gaps = 4/427 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A + ++RMV  G +PD V    +L  LCK+     A+ +   M    I      Y+
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK G+   A+ L  +ME  G   + VTY+SL+ GLC  G  +   + L  +I +
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            ++P+  T+S L++   KE  +  A +L +++I +G  P+ ++YN L+ G CKE    EA
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F  + SKG EP++V+Y+IL+ S C   R ++   L  E+      P  +TYN L+  
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK + A ++  EMV     PS  +Y  ++  LC  G+++  ++  ++M   R    
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            G YN +   +C   KV +A+++  SL +K        Y  +I  LC+KG   +A  L  
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549

Query: 437 EMTKYGFTPDSYTYSSLIRG-LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           +M + G TPD +TY+ LIR  L   GLI  ++E+   M+   +  D      +++ +   
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTIK-MVIDMLSD 607

Query: 496 RRTDLSL 502
           RR D S 
Sbjct: 608 RRLDKSF 614



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 226/469 (48%), Gaps = 34/469 (7%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K+NDA    E M+     P  +    L   + +  +    +   + M  +GI  D  +
Sbjct: 48  DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            T ++NC C+K  + +A  ++ +    GY  +T+T+++LV G C+ G +++++  +DR++
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +    P+  T S L+     +  V  A+ L+D ++  G +P+ V+Y  +L  LCK G + 
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+  FR +  +  + +VV Y+I++ SLC +G +++A  L  EM+       +VTY+ LI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           G L   GK D   K+L EM+     P   +++ +I     EGK+    +  ++M  R   
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           P+  TYN L                                  I   C++   ++A Q+ 
Sbjct: 348 PDTITYNSL----------------------------------IDGFCKENCLHEANQMF 373

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M   G  PD  TYS LI   C    +++ + +F  +      P+   +N L+LG C+S
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + + + E+FQ M+ +G  P+  TY IL++G+    EL  + E+ +++Q
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 165/326 (50%), Gaps = 2/326 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D   +DA      M  KG K DVV  ++L+  LC   K     K++  M+   II
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++ L++   K+G +  A +L  +M   G   +T+TYNSL+ G C    L+++ Q 
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ KG  P+  TYS L+ +  K + V   M+L  +I +KG  PN ++YN L+ G C+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+   A   F+++ S+G  P+VV+Y ILL  LC  G   +A E+  +M     +  I  
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI+I  +    K D A  +   +     +P   +YN +I  LC +G +        +M 
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552

Query: 371 HRRCKPNEGTYNGL--AMLCGVGKVQ 394
              C P++ TYN L  A L G G + 
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLIS 578



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 7/195 (3%)

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL--GNKQNSSPQEFY 415
           KV+  +   + M   R  P    +N    LC      + + ++     G + N    + Y
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFN---RLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106

Query: 416 K--YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
               +I   CRK K   AF +L    K G+ PD+ T+S+L+ G C+EG + EA+ +   M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            E   +PD+   + L+ GLC   R   +L +   M+E G  P+E TY  ++  +      
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226

Query: 534 ELSAEVLKELQLRQV 548
            L+ ++ ++++ R +
Sbjct: 227 ALALDLFRKMEERNI 241


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 233/506 (46%), Gaps = 36/506 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            +DA     +MV     P + Q   LL  L +       + +   M   G+     + T 
Sbjct: 85  FDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NCLC    VG    ++ K+   G+  + +T+N+L+ GLC+ G + ++++ LD ++ +G
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P  +T++ ++    K     AA+  +  ++    +P +VSY++++  LCK     EA+
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  + S G  P VV+YN L+  +C  G+W++A+ L  EM   +  P +VT++IL+ +L
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324

Query: 319 AYHGKTDHALKV-----------------------------------LDEMVKGRFRPSA 343
              G    AL V                                   L+EM+    RP  
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +++  +   C +G V      ++ M  R  +PN  TYN L    C   ++ EA  +   
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + NK  +     Y  +I   C+  +  +A QL  EM+  G TP+S T+++LI GLC  G 
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
              A E+F  M  +   PD+  ++ LL G CK    D +L +F+ + +    PN     I
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKI 564

Query: 523 LVEGIAHQDELELSAEVLKELQLRQV 548
           L+ G+    +LE + E+   L + ++
Sbjct: 565 LLGGMCKAGKLEDAKELFSSLSIEEL 590



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 208/428 (48%), Gaps = 34/428 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A  QL+ ++S+G++P V   T ++  LCK  K   AI  M+ MV     P+  SY+
Sbjct: 189 RIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYS 248

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A+ L   M   G     VTYNSL+ G+C  G   Q+      +++ 
Sbjct: 249 IIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW 308

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+  T+S L++A  KE  V  A+ +   +I    +P++V+Y+ L+ G+CK    +E+
Sbjct: 309 NMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKES 368

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ S+   P+VV+++I +   C +G   EA  ++  M      P +VTYN L+  
Sbjct: 369 STLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDG 428

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              H + D A KV D MV     P   SYN +I   C   ++D   +  D+M H+   PN
Sbjct: 429 YCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             T+  L                                  I+ LC+ G+ Y A +L  +
Sbjct: 489 SITHTTL----------------------------------ISGLCQAGRPYAAKELFKK 514

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M  +G  PD  TYS+L+ G C  G ++EAL +F  +++   KP+      LL G+CK+ +
Sbjct: 515 MGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGK 574

Query: 498 TDLSLEVF 505
            + + E+F
Sbjct: 575 LEDAKELF 582



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 202/449 (44%), Gaps = 37/449 (8%)

Query: 107 DLCKANKMKK---AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           D CK         A+     MV     P  + +  L+  L +  +    + +  KME +G
Sbjct: 75  DKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFG 134

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              +  T   L+  LC L  +      L ++ + G  P+  T++ L+     E  +  AM
Sbjct: 135 VSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAM 194

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           + LD I+++G +P + ++ +++ GLCK G+T  AI + + +     EP VVSY+I++ SL
Sbjct: 195 EQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSL 254

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C      EA +L   M     SPT+VTYN LI  +   G+   A  +  EM++   +P  
Sbjct: 255 CKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDV 314

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
            +++ ++  LC EG V   +    +M     +P+  TY+ L                   
Sbjct: 315 VTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSL------------------- 355

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                          I  +C+     ++  LL EM      PD  T+S  +   C +G++
Sbjct: 356 ---------------IHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMV 400

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            EA  I  +M E   +P+V  +N+L+ G C   + D + +VF +M+ KG  P+  +Y IL
Sbjct: 401 SEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNIL 460

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSES 552
           ++G    + ++ + ++  E+  + +   S
Sbjct: 461 IKGYCKSERIDEAKQLFDEMSHKGLTPNS 489



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 173/334 (51%), Gaps = 1/334 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++  +N+A      M S G  P VV   +L+Y +C + + K+A  + + M+   + 
Sbjct: 252 DSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMK 311

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++ LV+ LCK+G V  A+ +  KM       + VTY+SL+ G+C      +S   
Sbjct: 312 PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTL 371

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ ++ + + P+  T+S  ++   K+  V  A  +++ +I +G +PN+V+YN L+ G C 
Sbjct: 372 LNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCL 431

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + +EA + F  + +KG  P+V+SYNIL++  C   R +EA +L  EM     +P  +T
Sbjct: 432 HSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSIT 491

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +  LI  L   G+   A ++  +M      P   +Y+ +++  C  G +D  +   + + 
Sbjct: 492 HTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALK 551

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSL 403
             + KPN       L  +C  GK+++A  +  SL
Sbjct: 552 KSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 63/129 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++++A    + M  KG  P+ +  T L+  LC+A +   A ++ + M S G  PD  
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++  CK G++  A+ L E ++      N V    L+ G+C  G L  + +    L
Sbjct: 526 TYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585

Query: 195 IQKGLVPNA 203
             + L P+ 
Sbjct: 586 SIEELQPDV 594


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 226/435 (51%), Gaps = 7/435 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQL-VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           Y  L+N L + G V    Q+ +E +ED   P N  TYN +V G C LGN+ ++ Q++ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCP-NIYTYNKMVNGYCKLGNVEEANQYVSKI 244

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ GL P+ FTY+ L+    + + + +A K+ +++  KG + N V+Y  L+ GLC   R 
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+  F  +      P V +Y +L++SLC   R  EA  L+ EM+     P I TY +L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL    K + A ++L +M++    P+  +YN +I   C  G ++  V  ++ M  R+ 
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            PN  TYN L        V +A  ++  +  ++       Y  +I   CR G    A++L
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L  M   G  PD +TY+S+I  LC    +EEA ++F  +E+    P+V  + AL+ G CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE---LSAEVLKELQLRQVVSE 551
           + + D +  + + M+ K  +PN  T+  L+ G+    +L+   L  E + ++ L+  VS 
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604

Query: 552 SA--VERLVMQYDFE 564
               + RL+   DF+
Sbjct: 605 DTILIHRLLKDGDFD 619



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 232/478 (48%), Gaps = 21/478 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M+ KG  P+V+    L+   CK   ++ A+ V+E+M S  + P+  +Y  L+   CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             NV  AM ++ KM +     + VTYNSL+ G C  GN + + + L  +  +GLVP+ +T
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++++  K + V  A  L D +  KG  PN+V Y  L+ G CK G+ +EA      + 
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           SK   PN +++N L+  LC +G+ +EA  L  +M      PT+ T  ILI  L   G  D
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           HA     +M+    +P A +Y   I   C EG++      + +M      P+  TY+ L 
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679

Query: 386 MLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC------RKGKTYQ-------- 430
              G +G+   AF +++ + +      Q  +  +I  L       +KG   +        
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739

Query: 431 ----AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-YKPDVDNF 485
                 +LL +M ++  TP++ +Y  LI G+C  G +  A ++F  M+  +   P    F
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           NALL   CK ++ + + +V   MI  G +P   +  +L+ G+  + E E    V + L
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 230/493 (46%), Gaps = 53/493 (10%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           ++A   ++ M   G KP++   T L+  LC   K +KA +++  M+  G++P+  +Y  L
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N  CK+G +  A+ +VE ME      NT TYN L++G C   N+++++  L++++++ +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKV 458

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P+  TY+ L++   +     +A +LL  +  +G  P+  +Y  ++  LCK  R EEA  
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F  L  KG  PNVV Y  L+   C  G+ +EA+ +L +M   +  P  +T+N LI  L 
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             GK   A  + ++MVK   +P+ ++   +I RL  +G  D       QM     KP+  
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           TY                                     I + CR+G+   A  ++ +M 
Sbjct: 639 TYTTF----------------------------------IQTYCREGRLLDAEDMMAKMR 664

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR--- 496
           + G +PD +TYSSLI+G    G    A ++   M +   +P    F +L+  L + +   
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724

Query: 497 ---------------RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
                            D  +E+ + M+E    PN  +Y  L+ GI     L ++ +V  
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784

Query: 542 ELQLRQVVSESAV 554
            +Q  + +S S +
Sbjct: 785 HMQRNEGISPSEL 797



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 213/444 (47%), Gaps = 3/444 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P++     ++   CK   +++A + +  +V +G+ PD  +YT L+   C++ ++  A ++
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
             +M   G   N V Y  L+ GLC+   +++++    ++      P   TY+ L+++   
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                 A+ L+ ++   G KPN+ +Y VL+  LC + + E+A      +  KG  PNV++
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN L+   C  G  E+A +++  M+    SP   TYN LI           A+ VL++M+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKML 454

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           + +  P   +YN +I   C  G  D   + L  M  R   P++ TY  +   LC   +V+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  +  SL  K  +     Y  +I   C+ GK  +A  +L +M      P+S T+++LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC +G ++EA  +   M +   +P V     L+  L K    D +   FQ M+  G  
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634

Query: 515 PNETTYTILVEGIAHQDELELSAE 538
           P+  TYT  ++    +  L L AE
Sbjct: 635 PDAHTYTTFIQTYCREGRL-LDAE 657



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 218/478 (45%), Gaps = 37/478 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           + ++V  G  PD    T+L+   C+   +  A KV   M   G   +  +YT+L++ LC 
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300

Query: 146 KGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
              +  AM L  KM +D  +PT   TY  L++ LC     +++L  +  + + G+ PN  
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPT-VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+ L+++   +     A +LL  ++ KG  PN+++YN L+ G CK G  E+A+     +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 265 PSKGFEPN----------------------------------VVSYNILLRSLCMEGRWE 290
            S+   PN                                  VV+YN L+   C  G ++
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            A  LL+ M+     P   TY  +I SL    + + A  + D + +    P+   Y  +I
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
              C  GKVD     L++M  + C PN  T+N L   LC  GK++EA  + + +      
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                   +I  L + G    A+    +M   G  PD++TY++ I+  C EG + +A ++
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
              M E    PD+  +++L+ G     +T+ + +V + M + G  P++ T+  L++ +
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 230/485 (47%), Gaps = 20/485 (4%)

Query: 62  PNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM 121
           PN +  N     +    ++ A   L +M+ +   PDVV   +L+   C++     A +++
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
            +M   G++PD  +YT +++ LCK   V  A  L + +E  G   N V Y +L+ G C  
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           G ++++   L++++ K  +PN+ T++ L+     +  +  A  L + ++  G +P + + 
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
            +L+  L K+G  + A   F+ + S G +P+  +Y   +++ C EGR  +A +++A+M  
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR--------- 352
              SP + TY+ LI      G+T+ A  VL  M      PS  ++  +I           
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725

Query: 353 ------LCSEGKV---DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
                 LC+   +   D VV+ L++M      PN  +Y  L + +C VG ++ A  +   
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785

Query: 403 LGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           +   +  SP E  +  +++  C+  K  +A +++ +M   G  P   +   LI GL  +G
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
             E    +F  + +  Y  D   +  ++ G+ K    +   E+F +M + G   +  TY+
Sbjct: 846 EKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYS 905

Query: 522 ILVEG 526
           +L+EG
Sbjct: 906 LLIEG 910



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 3/214 (1%)

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
           DE  + +++     YN ++  L   G VD + +   +M   +  PN  TYN +    C +
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           G V+EA   +  +  +    P  F Y  +I   C++     AF++  EM   G   +   
Sbjct: 232 GNVEEANQYVSKIV-EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y+ LI GLC+   I+EA+++FV M++ +  P V  +  L+  LC S R   +L + + M 
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           E G  PN  TYT+L++ +  Q + E + E+L ++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 231/472 (48%), Gaps = 2/472 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+DA      MV     P +V+ + LL  + K NK    I + E M + GI  +  
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+  +N  C++  +  A+ ++ KM   GY  + VT NSL+ G C    +++++  +D++
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  T++ L+   ++      A+ L++ ++ KG +P+LV+Y  ++ GLCK G  
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+     +     E +VV YN ++  LC     ++A +L  +M+     P + TYN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH-RR 373
           I  L  +G+   A ++L +M++    P    +N +I     EGK+    K  D+M   + 
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+   YN L    C   +V+E   + + +  +        Y  +I    +      A 
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            +  +M   G  PD  TY+ L+ GLC  G +E AL +F  M++ D K D+  +  ++  L
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           CK+ + +   ++F  +  KG  PN  TYT ++ G   +   E +  +  E++
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 205/438 (46%), Gaps = 2/438 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K+  AI +   MV S   P    ++ L++ + K       + L E+M++ G   N  TY+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
             +   C    L+ +L  L ++++ G  P+  T + LL        +  A+ L+D ++  
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G +P+ V++  L+ GL +  +  EA+     +  KG +P++V+Y  ++  LC  G  + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL +M+ G     +V YN +I  L  +   D A  + ++M     +P   +YNP+I+ 
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP 411
           LC+ G+     + L  M  +   P+   +N L       GK+ EA  +   +   ++  P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 412 QEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+  +  +  ++  EM++ G   ++ TY++LI G       + A  +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M      PD+  +N LL GLC +   + +L VF+ M ++    +  TYT ++E +   
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474

Query: 531 DELELSAEVLKELQLRQV 548
            ++E   ++   L L+ V
Sbjct: 475 GKVEDGWDLFCSLSLKGV 492



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 143/278 (51%), Gaps = 4/278 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DAF    +M +KG KPDV     L+  LC   +   A +++  M+   I PD   +  
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325

Query: 139 LVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           L++   K+G +  A +L ++M    + +P + V YN+L++G C    + + ++    + Q
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +GLV N  TY+ L+   ++ R    A  +   +++ G  P++++YN+LL GLC  G  E 
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+  F  +  +  + ++V+Y  ++ +LC  G+ E+  +L   +      P +VTY  ++ 
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII-ARL 353
                G  + A  +  EM +    P++ +YN +I ARL
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 137/284 (48%), Gaps = 2/284 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDASSY 136
           + +DA   L  M+ K   PD+V    L+    K  K+ +A K+ + MV S    PD  +Y
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+   CK   V   M++  +M   G   NTVTY +L+ G     + + +     +++ 
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+ P+  TY+ LL+       V  A+ + + +  +  K ++V+Y  ++  LCK G+ E+
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
               F  L  KG +PNVV+Y  ++   C +G  EEA+ L  EM      P   TYN LI 
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           +    G    + +++ EM    F   A+++  ++  +  +G++D
Sbjct: 540 ARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLD 582



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 34/232 (14%)

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ +  +MVK R  PS   ++ +++ +    K DLV+   +QM             
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM------------- 101

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
                             Q+LG   N      Y   I   CR+ +   A  +L +M K G
Sbjct: 102 ------------------QNLGISHNLYT---YSIFINYFCRRSQLSLALAILGKMMKLG 140

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           + P   T +SL+ G C    I EA+ +   M E  Y+PD   F  L+ GL +  +   ++
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            + + M+ KG  P+  TY  ++ G+  + E +L+  +L +++  ++ ++  +
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 226/466 (48%), Gaps = 1/466 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           + +KG  P +     LL  L KAN++K + +V ++M   G+ PD   ++ +VN  C  G 
Sbjct: 153 LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGR 212

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A++L  KME  G   N VTYN+++ GLC  G L+++ QF +++ ++ + P+  TY  
Sbjct: 213 VDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGV 272

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K      A  +L ++  +G  PN V YN L+ G C+ G    A++   D+ S G
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG 332

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN V+ N L++  C   + E A  LL EM  G       T+  +I  L    + D AL
Sbjct: 333 ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSAL 392

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
             + EM+   F+P+      +++ LC  GK    ++   ++  +    N  T N L   L
Sbjct: 393 LFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGL 452

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G  +EA  +++ +  +        Y  +I + C++GK  + F+L  EM + G  PD 
Sbjct: 453 CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDM 512

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           YTY+ L+ GLC  G IEEA  ++   ++    PD   +  ++ G CK+ R +   ++FQ 
Sbjct: 513 YTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQE 572

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           M+      N   Y  L+        +  +  +  +++ R +   SA
Sbjct: 573 MVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSA 618



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 245/518 (47%), Gaps = 48/518 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA     +M   G  P+VV   N+++ LCK  ++ +A +  E M    + P   +Y 
Sbjct: 212 RVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYG 271

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N L K      A  ++++M D GY  N V YN+L+ G C +GN++ +LQ  D +I  
Sbjct: 272 VLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISN 331

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG----------------------- 234
           G+ PN+ T + L++   K   +  A  LL++++  GG                       
Sbjct: 332 GISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSA 391

Query: 235 ------------KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                       KPN     +L++GLC+ G+  EAI  +  L  KGF  N V+ N L+  
Sbjct: 392 LLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHG 451

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  G  EEA +LL EM         ++YN LI +    GK +   K+ +EMV+   +P 
Sbjct: 452 LCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-----PNEGTYNGLAM--LCGVGKVQE 395
             +YN ++  LC+ GK++        ++H  CK     P+  TY G+ +   C   +V+E
Sbjct: 512 MYTYNMLLHGLCNMGKIEEA----GGLWH-ECKKNGNFPDAYTY-GIMIDGYCKANRVEE 565

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
              + Q +   +       Y  +I + C  G   +AF+L  +M   G    S TYSSLI 
Sbjct: 566 GEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIH 625

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GL   GL++ A ++   M +    P+V  + AL+ G CK  +      + Q M      P
Sbjct: 626 GLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHP 685

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           N+ TYTI++ G      ++ +A++L E+  + +V ++ 
Sbjct: 686 NKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAV 723



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 214/442 (48%), Gaps = 3/442 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M+S G  P+ V   +L+   CK+N+M+ A  ++E M++ G + +  ++T +++ LC K
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
                A+  + +M    +  N      LV GLC  G  +++++   RL++KG   N  T 
Sbjct: 386 CRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS 445

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L+    +      A KLL +++ +G   + +SYN L+   CKEG+ EE  +   ++  
Sbjct: 446 NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G +P++ +YN+LL  LC  G+ EEA  L  E       P   TY I+I       + + 
Sbjct: 506 RGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEE 565

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
             K+  EMV  +   +A  Y  +I   C  G +    +  D M  R       TY+ L  
Sbjct: 566 GEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIH 625

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
            L  +G V  A  ++  +  K+  SP    Y  +I   C+ G+ ++   +L EM+     
Sbjct: 626 GLSNIGLVDSANQLLDEM-RKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVH 684

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  TY+ +I G C  G ++ A ++   M +    PD   +NAL  G CK  + + +L+V
Sbjct: 685 PNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKV 744

Query: 505 FQMMIEKGQMPNETTYTILVEG 526
             +M   G   ++ TYT L++G
Sbjct: 745 CDLMSTGGISLDDITYTTLIDG 766



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 213/439 (48%), Gaps = 1/439 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
             ++  ++ + G+ P   +  +L++ L K   V  + Q+ + M   G   +   ++++V 
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             C  G ++ +++   ++ + G+ PN  TY+ ++    K   +  A +  + +  +  KP
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +LV+Y VL+ GL K  R +EA    +++  +G+ PN V YN L+   C  G    A ++ 
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIR 325

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            +M     SP  VT N LI       + +HA  +L+EM+ G    +  ++  +I RLC +
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            + D  +  + +M  R  KPN+G    L + LC  GK  EA  +   L  K  ++     
Sbjct: 386 CRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS 445

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I  LC  G   +A +LL EM + G   DS +Y++LI   C EG +EE  ++   M  
Sbjct: 446 NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              +PD+  +N LL GLC   + + +  ++    + G  P+  TY I+++G    + +E 
Sbjct: 506 RGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEE 565

Query: 536 SAEVLKELQLRQVVSESAV 554
             ++ +E+   ++   + V
Sbjct: 566 GEKLFQEMVTMKIEQNAVV 584



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 191/396 (48%), Gaps = 1/396 (0%)

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
           G   +L   + + G   +  T N L+  L     +  S Q  D +   G+ P+ + +S +
Sbjct: 144 GVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTM 203

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           + A      V  A++L   +   G  PN+V+YN ++ GLCK GR +EA +F   +  +  
Sbjct: 204 VNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERV 263

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           +P++V+Y +L+  L    R++EAN +L EM     +P  V YN LI      G    AL+
Sbjct: 264 KPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQ 323

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLC 388
           + D+M+     P++ + N +I   C   +++     L++M       N+GT+   +  LC
Sbjct: 324 IRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLC 383

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
              +   A   I  +  +           +++ LC+ GK  +A +L Y + + GF  ++ 
Sbjct: 384 LKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTV 443

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           T ++LI GLC  G  EEA ++   M E     D  ++N L+L  CK  + +   ++ + M
Sbjct: 444 TSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEM 503

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + +G  P+  TY +L+ G+ +  ++E +  +  E +
Sbjct: 504 VRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 170/382 (44%), Gaps = 34/382 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K ++A     R++ KG   + V +  L++ LC+A   ++A K+++ M+  G++ D+ 
Sbjct: 419 QNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSI 478

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+   CK+G V    +L E+M   G   +  TYN L+ GLC +G + ++       
Sbjct: 479 SYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHEC 538

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G  P+A+TY  +++   K   V    KL  +++    + N V Y  L+   C+ G  
Sbjct: 539 KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNM 598

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA R   D+ S+G      +Y+ L+  L   G  + AN+LL EM     SP +V Y  L
Sbjct: 599 REAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTAL 658

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG     G+      +L EM      P+  +Y  +I   C  G +    K L++M  +  
Sbjct: 659 IGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGI 718

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            P+  TYN L                                      C++GK  +A ++
Sbjct: 719 VPDAVTYNALT----------------------------------NGFCKEGKMEEALKV 744

Query: 435 LYEMTKYGFTPDSYTYSSLIRG 456
              M+  G + D  TY++LI G
Sbjct: 745 CDLMSTGGISLDDITYTTLIDG 766



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 162/340 (47%), Gaps = 1/340 (0%)

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
           +K  G     +L   +  KG  P+L + N LL+ L K    + + + F  +   G  P+V
Sbjct: 138 FKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDV 197

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
             ++ ++ + C  GR ++A EL  +M+    +P +VTYN +I  L  +G+ D A +  ++
Sbjct: 198 YLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEK 257

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           M K R +PS  +Y  +I  L    + D     L +M  R   PN   YN L    C +G 
Sbjct: 258 MEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGN 317

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +  A  I   + +   S        +I   C+  +   A  LL EM   G   +  T++S
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTS 377

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +I  LC++   + AL   + M   ++KP+      L+ GLC++ +   ++E++  ++EKG
Sbjct: 378 VIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
              N  T   L+ G+      E +A++LKE+  R +V +S
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDS 477



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 87/166 (52%), Gaps = 3/166 (1%)

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
           G G V E F++   L NK      +   ++++SL +  +   ++Q+   M   G TPD Y
Sbjct: 142 GFGVVFELFSL---LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVY 198

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
            +S+++   C  G +++A+E+F  ME+    P+V  +N ++ GLCK+ R D + +  + M
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM 258

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            ++   P+  TY +L+ G+   +  + +  +LKE+  R     + V
Sbjct: 259 EKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVV 304



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 71/130 (54%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M  +G  P+VV  T L+   CK  +M K   +++ M  + + P+  +YT ++N  CK
Sbjct: 640 LDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCK 699

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A +L+ +M   G   + VTYN+L  G C  G + ++L+  D +   G+  +  T
Sbjct: 700 LGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDIT 759

Query: 206 YSFLLEAAYK 215
           Y+ L++  +K
Sbjct: 760 YTTLIDGWHK 769


>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
          Length = 327

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/300 (37%), Positives = 173/300 (57%), Gaps = 1/300 (0%)

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+ L+EA   + GV   MKLLD++I  G +P++  +N ++ G+C+EG  + A  F R +
Sbjct: 27  TYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYI 86

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            +KG+ P+V+SY+ILLR L  + +WE+  +L+++M      P +VTY+ILI SL   GK 
Sbjct: 87  SAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKV 146

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG- 383
           + A+ +L  M +    P A SY+P+IA  C E +VDL ++ L+ M    C P+   YN  
Sbjct: 147 EEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTI 206

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L+ LC  GK  EA  I + LG          Y  + ++L   G   +A  ++ EM     
Sbjct: 207 LSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDI 266

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD  TY+SLI  LC + ++++A+E+ V ME   Y+P V ++N +LLGL K  R   ++E
Sbjct: 267 DPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHRISDAIE 326



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 161/305 (52%), Gaps = 1/305 (0%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P + VTY  L+    + G ++  ++ LD +I+ GL P+ F ++ ++    +E  V  A +
Sbjct: 22  PISLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFE 81

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
            +  I AKG  P+++SY++LL GL  + + E+  +   D+ SKG EPNVV+Y+IL+ SLC
Sbjct: 82  FIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLC 141

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
            +G+ EEA  LL  M     +P   +Y+ LI +     + D A++ L+ M+     P   
Sbjct: 142 RDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIV 201

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSL 403
           +YN I++ LC  GK D  +K  +++    C PN  +YN L + L   G    A  +I  +
Sbjct: 202 NYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEM 261

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
            +K     +  Y  +I+ LCR     QA +LL +M    + P   +Y+ ++ GL     I
Sbjct: 262 LSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHRI 321

Query: 464 EEALE 468
            +A+E
Sbjct: 322 SDAIE 326



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 150/287 (52%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++D    L+ M+  G +PD+     ++  +C+   + +A + +  + + G  PD  SY+ 
Sbjct: 41  VDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSI 100

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L  +       +L+  M   G   N VTY+ L+  LC  G + +++  L  + ++G
Sbjct: 101 LLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQG 160

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+A++Y  L+ A  KE  V  A++ L+ +I+ G  P++V+YN +L+ LCK G+ +EA+
Sbjct: 161 LTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEAL 220

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           + F  L   G  PNV SYN L  +L   G    A  ++ EM   D  P  +TYN LI  L
Sbjct: 221 KIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLISCL 280

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
                 D A+++L +M    ++PS  SYN ++  L    ++   ++C
Sbjct: 281 CRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHRISDAIEC 327



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 144/278 (51%), Gaps = 2/278 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
            +K+++ M+ SG+ PD   +  +V  +C++G V  A + +  +   GY  + ++Y+ L+R
Sbjct: 44  VMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSILLR 103

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           GL          + +  ++ KG  PN  TYS L+ +  ++  V  A+ LL  +  +G  P
Sbjct: 104 GLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTP 163

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +  SY+ L+   CKE R + AI F   + S G  P++V+YN +L +LC  G+ +EA ++ 
Sbjct: 164 DAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIF 223

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            ++      P + +YN L  +L   G    AL ++ EM+     P   +YN +I+ LC +
Sbjct: 224 EKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLISCLCRD 283

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ 394
             VD  ++ L  M     +P+  +YN   +L G+ KV 
Sbjct: 284 AMVDQAIELLVDMESSVYQPSVISYN--IVLLGLSKVH 319



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 137/255 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  ++ AF  +  + +KG+ PDV+  + LL  L    K +   K+M  M+S G  P+  
Sbjct: 72  REGLVDRAFEFIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVV 131

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++ LC+ G V  A+ L++ M++ G   +  +Y+ L+   C    ++ +++FL+ +
Sbjct: 132 TYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESM 191

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I  G +P+   Y+ +L    K      A+K+ + +   G  PN+ SYN L + L   G  
Sbjct: 192 ISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHK 251

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+    ++ SK  +P+ ++YN L+  LC +   ++A ELL +M+     P++++YNI+
Sbjct: 252 IRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIV 311

Query: 315 IGSLAYHGKTDHALK 329
           +  L+   +   A++
Sbjct: 312 LLGLSKVHRISDAIE 326



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 115/222 (51%), Gaps = 1/222 (0%)

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           ++VTY ILI +    G  D  +K+LDEM++   RP    +N ++  +C EG VD   + +
Sbjct: 24  SLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFI 83

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             +  +   P+  +Y+ L   L    K ++   ++  + +K        Y  +I+SLCR 
Sbjct: 84  RYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRD 143

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +A  LL  M + G TPD+Y+Y  LI   C E  ++ A+E    M      PD+ N+
Sbjct: 144 GKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNY 203

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           N +L  LCK+ + D +L++F+ + E G  PN ++Y  L   +
Sbjct: 204 NTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSAL 245



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 140/275 (50%), Gaps = 3/275 (1%)

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           ++V+Y IL+ +  ++G  ++  +LL EM      P +  +N ++G +   G  D A + +
Sbjct: 24  SLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFI 83

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGV 390
             +    + P   SY+ ++  L ++ K +   K +  M  + C+PN  TY+ L + LC  
Sbjct: 84  RYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRD 143

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           GKV+EA ++++ +  +Q  +P  + Y  +I + C++ +   A + L  M   G  PD   
Sbjct: 144 GKVEEAVSLLKVM-KEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVN 202

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y++++  LC  G  +EAL+IF  + E    P+V ++N L   L  S     +L +   M+
Sbjct: 203 YNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEML 262

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            K   P+E TY  L+  +     ++ + E+L +++
Sbjct: 263 SKDIDPDEITYNSLISCLCRDAMVDQAIELLVDME 297


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 216/437 (49%), Gaps = 36/437 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G+ P V     +L  L  A+ +  A + +  M+  G+ P+  +Y  LV  LC +G +  A
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLE 211
           + +V  M   G   N VTYN+LV   C  G L+ + + +  + ++G   PN  T++ ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K   +  A K+ D+++ +G  P++VSYN LL+G CK G   E++  F ++  +G  P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +VV++  L+ + C  G  E+A  L+A+M         VT+  LI      G  D AL  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG 391
           +EM K   +PS   YN +I   C  G++DL  + + +M  +R KP+  TY+         
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS--------- 402

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
                                     +I+  C+ G    AFQL  +M K G  PD+ TYS
Sbjct: 403 -------------------------TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 437

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SLIRGLC E  + +A E+F  M +   +PD   +  L+ G CK    + +L +   MI K
Sbjct: 438 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497

Query: 512 GQMPNETTYTILVEGIA 528
           G +P+  TY++L+ G++
Sbjct: 498 GVLPDVVTYSVLINGLS 514



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 237/504 (47%), Gaps = 52/504 (10%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D  L  A   L  M+  G  P+V     L+  LC   ++++A+ V+  M  +G  P+A +
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVT 189

Query: 136 YTYL------------------------------------VNCLCKKGNVGYAMQLVEKM 159
           Y  L                                    VN LCK G +  A ++ ++M
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
              G   + V+YN+L+ G C +G L++SL     + Q+GLVP+  T++ L+ A  K   +
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A+ L+  +  +G + N V++  L+ G CK+G  ++A+    ++   G +P+VV YN L
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +   C  GR + A EL+ EM+     P +VTY+ +I      G  D A ++  +M+K   
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
            P A +Y+ +I  LC E +++   +  + M     +P+E TY  L    C  G V++A +
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS------- 451
           +   +  K        Y  +I  L +  +T +A +LL+++      PD+  Y        
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549

Query: 452 --------SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
                   +L++G CM+GL++EA +++  M + ++K D   ++ L+ G C+      +L 
Sbjct: 550 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 609

Query: 504 VFQMMIEKGQMPNETTYTILVEGI 527
             + M+  G  PN T+   LV G+
Sbjct: 610 FHKQMLRSGFSPNSTSTISLVRGL 633



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 196/397 (49%), Gaps = 16/397 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + MV +G  PDVV    LL   CK   + +++ V   M   G++PD  ++T L++  CK
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCK 305

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A+ LV +M + G   N VT+ +L+ G C  G L+ +L  ++ + + G+ P+   
Sbjct: 306 AGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVC 365

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K   +  A +L+ ++ AK  KP++V+Y+ +++G CK G  + A +  + + 
Sbjct: 366 YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 425

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+ ++Y+ L+R LC E R  +A EL   M      P   TY  LI      G  +
Sbjct: 426 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 485

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL + DEM++    P   +Y+ +I  L    +     + L +++H    P+   Y+ L 
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545

Query: 386 MLCG----------------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           + C                  G ++EA  + QS+ ++        Y  +I   CR G   
Sbjct: 546 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           +A     +M + GF+P+S +  SL+RGL  EG++ EA
Sbjct: 606 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 197/398 (49%), Gaps = 7/398 (1%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           GY  +   YN+++  L    +L  + +FL  +++ G+ PN +TY+ L+ A      +  A
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEPNVVSYNILLR 281
           + ++ D+   G  PN V+YN L+   C+ G  + A R    +  +G  +PN+V++N ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC  GR E A ++  EM     +P +V+YN L+      G    +L V  EM +    P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
              ++  +I   C  G ++  V  + QM  R  + NE T+  L    C  G + +A   +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + +           Y  +I   C+ G+   A +L+ EM      PD  TYS++I G C  
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G ++ A ++   M +    PD   +++L+ GLC+ +R + + E+F+ M++ G  P+E TY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 521 TILVEGIAHQDELE----LSAEVLKELQLRQVVSESAV 554
           T L++G   +  +E    L  E++++  L  VV+ S +
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 140/306 (45%), Gaps = 53/306 (17%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA L +E M   G +P VV    L+   CK  +M  A +++  M +  + PD  +Y+ 
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++  CK GN+  A QL +KM   G   + +TY+SL+RGLC    LN + +  + ++Q G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL---------- 248
           + P+ FTY+ L++   KE  V  A+ L D++I KG  P++V+Y+VL+ GL          
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 249 ----------------------------------------CKEGRTEEAIRFFRDLPSKG 268
                                                   C +G  +EA + ++ +  + 
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG---KTD 325
           ++ +   Y+IL+   C  G   +A     +M     SP   +   L+  L   G   + D
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 326 HALKVL 331
           +A++ L
Sbjct: 644 NAIQDL 649



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 22/225 (9%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + +LNDA    E M+  G +PD    T L+   CK   ++KA+ + + M+  G++PD  +
Sbjct: 446 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 505

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y+ L+N L K      A +L+ K+       + + Y++L+   C        +  L    
Sbjct: 506 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-CCSKAEFKSVVALLKGFC 564

Query: 196 QKGLVPNA-FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            KGL+  A   Y  +L+  +K          LD  +          Y++L+ G C+ G  
Sbjct: 565 MKGLMKEADKVYQSMLDRNWK----------LDGSV----------YSILIHGHCRGGNV 604

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            +A+ F + +   GF PN  S   L+R L  EG   EA+  + ++
Sbjct: 605 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649


>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Brachypodium distachyon]
          Length = 753

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 223/468 (47%), Gaps = 38/468 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A   ++ MV  G  PD      L+  L K  K  KA +V+E+MV SG IPD  +  
Sbjct: 306 KLIQACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGGIPDTITCN 365

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC+ G +  AM ++E M   G   N +T+N+L+R +C     ++++ F    ++ 
Sbjct: 366 MLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLRI 425

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   T + L++   K+ G   AM++LD++  +G +P++V+YN L++  CK  R ++A
Sbjct: 426 GWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDA 485

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 L ++G EPN  +Y ILL SLC + RW E  +LLA M   +  P +  YNI I  
Sbjct: 486 KTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINY 545

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D A+ VL++MV  +  P   +YN ++  +  E                     
Sbjct: 546 FCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKE--------------------- 584

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLL 435
                        G V+EA  I   +  +QN        Y  +I +L  KG+  +A  L 
Sbjct: 585 -------------GMVEEALVIAHFI--RQNGWQLVLITYNTLIDALANKGEVKKAMVLF 629

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM     +PD  TY SL+ G C + + EEALE+        ++     F  ++  LC+ 
Sbjct: 630 DEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGFQVKTTTFIMVIQALCRD 689

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + + + E+ ++M+ +    N + Y  +V  +A    +E +  + +EL
Sbjct: 690 GKVEAAAEILRVMVSETNNTNSSFYLSIVRRVAKSGRIEEAERLHQEL 737



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 182/415 (43%), Gaps = 43/415 (10%)

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +R  C  G L Q+   +D ++  G +P++     L+    K    + A ++L+ ++  GG
Sbjct: 298 LRRYCNNGKLIQACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGG 357

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P+ ++ N+L+  LC+ G+   A+    D+   G  PN +++N L+R +C +  +++A  
Sbjct: 358 IPDTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAIT 417

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
              E       P ++T  +L+  +     +  A++VLDE+     +P   +YN +I+  C
Sbjct: 418 FWKEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASC 477

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQ- 412
              ++      L ++     +PN  TY   L  LC   +  E   ++  +  + N  P  
Sbjct: 478 KADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHM-KRANCEPDV 536

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI--- 469
             Y   I   C+ G   QA  +L +M      PD  TY++L+  +  EG++EEAL I   
Sbjct: 537 TAYNIFINYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHF 596

Query: 470 --------------------------------FVVMEEYDYKPDVDNFNALLLGLCKSRR 497
                                           F  M      PD   + +L++G CK   
Sbjct: 597 IRQNGWQLVLITYNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNM 656

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           ++ +LE+    +  G     TT+ ++++ +    ++E +AE+     LR +VSE+
Sbjct: 657 SEEALELLNRTLALGFQVKTTTFIMVIQALCRDGKVEAAAEI-----LRVMVSET 706


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 231/469 (49%), Gaps = 8/469 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           + +KG  P       LL  L +A + +K  +   + V  G+ PD   +T  +N  CK G 
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHV-VCKGVSPDVYLFTTAINAFCKGGK 267

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A++L  KME+ G   N VTYN+++ GL M G  +++  F ++++++G+ P   TYS 
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K + +  A  +L ++  KG  PN++ YN L+  L + G   +AI     + SKG
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKG 387

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
                 +YN L++  C  G+ + A  LL EM     +    ++  +I  L  H   D AL
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSAL 447

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGK----VDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + + EM+     P       +I+ LC  GK    V+L +K L++ F    K +    +GL
Sbjct: 448 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGL 507

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  GK++E F I + +  +     +  Y  +I+  C   K  +AF  + EM K G  
Sbjct: 508 ---CEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLK 564

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD+YTYS LIRGL     +EEA++ +   +     PDV  ++ ++ G CK+ RT+   ++
Sbjct: 565 PDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKL 624

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           F  M+     PN   Y  L+        L ++ E+ ++++ + +   SA
Sbjct: 625 FDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSA 673



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 223/475 (46%), Gaps = 34/475 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA+  L+ M  KG  P+V+   NL+  L +A  + KAI++ ++MVS G+   +S+Y 
Sbjct: 337 RIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 396

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK G    A +L+++M   G+  N  ++ S++  LC     + +L+F+  ++ +
Sbjct: 397 TLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLR 456

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P     + L+    K      A++L    + KG   +  + N LL GLC+ G+ EE 
Sbjct: 457 NMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEG 516

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R  +++  +GF  + VSYN L+   C   + +EA   + EM      P   TY+ILI  
Sbjct: 517 FRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRG 576

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K + A++   +  +    P   +Y+ +I   C   + +   K  D+M     +PN
Sbjct: 577 LLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPN 636

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
              YN                                  ++I + CR G+   A +L  +
Sbjct: 637 TVVYN----------------------------------HLIGAYCRSGRLSMALELRED 662

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G +P+S TY+SLI+G+ +   +EEA  +   M     +P+V ++ AL+ G  K  +
Sbjct: 663 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQ 722

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
                 + + M  K   PN+ TYT+++ G A    +  ++ +L E++ + +V +S
Sbjct: 723 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDS 777



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 203/408 (49%), Gaps = 8/408 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M+S G   +    T+++  LC  +    A++ +  M+   + P     T L++ LCK
Sbjct: 415 LKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 474

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A++L  K  + G+  +T T N+L+ GLC  G L +  +    ++ +G V +  +
Sbjct: 475 HGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVS 534

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+      + +  A   +D+++ KG KP+  +Y++L+ GL    + EEAI+F+ D  
Sbjct: 535 YNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCK 594

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+V +Y++++   C   R EE  +L  EM   +  P  V YN LIG+    G+  
Sbjct: 595 RNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLS 654

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL++ ++M      P++A+Y  +I  +    +V+     L++M     +PN   Y   A
Sbjct: 655 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT--A 712

Query: 386 MLCGVGKVQEAFAI---IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           ++ G GK+ +   +   ++ + +K     +  Y  +I    R G   +A +LL+EM + G
Sbjct: 713 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKG 772

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
             PDS TY   I G   +G +   L+ F   +E +Y   ++ +N L+L
Sbjct: 773 IVPDSITYKEFIYGYLKQGGV---LQAFKGSDEENYAAIIEGWNKLIL 817



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 76/154 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+ A    E M  KG  P+    T+L+  +   +++++A  ++E M   G+ P+  
Sbjct: 649 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVF 708

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++   K G +     L+ +M       N +TY  ++ G    GN+ ++ + L  +
Sbjct: 709 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEM 768

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
            +KG+VP++ TY   +    K+ GV  A K  D+
Sbjct: 769 REKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 227/446 (50%), Gaps = 2/446 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LL    +  K ++A  + +  +     PD+ +Y+ L+N  CK  +   A +L+++ME  G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              +   YN++++GLC  G ++ +L    R +Q+   P+  TY+ L++A  K   +  A 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHY-RDMQRHCAPSVITYTILVDALCKSARISDAS 122

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            +L+D+I  G  PN+V+YN L+ G CK G  +EA+  F  +      P+V +YNIL+   
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C + R ++  +LL EM      P  +TYN L+ SL   GK   A  +   M++   +PS 
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQS 402
            ++N +I   C  G++DL  +    M  R C P+  TYN  ++  C   ++ +A  +++ 
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +           Y  +++ LC+  +  +A+++   +   G+  D  T S+LI GLC    
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 362

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++A ++   ME     PDV  +  L+ G CK+ + D SL  F  M++KG +P   TY+I
Sbjct: 363 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 422

Query: 523 LVEGIAHQDELELSAEVLKELQLRQV 548
           +++ +     +     +LK +  R V
Sbjct: 423 VIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 212/439 (48%), Gaps = 2/439 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K  +A+   +  +     PD +  + L+   CKA   ++A ++++ M   GI+P  +
Sbjct: 10  RKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNA 69

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  ++  LC  G V  A+     M+ +  P+  +TY  LV  LC    ++ +   L+ +
Sbjct: 70  VYNTIIKGLCDNGRVDSALVHYRDMQRHCAPS-VITYTILVDALCKSARISDASLILEDM 128

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ G  PN  TY+ L+    K   +  A+ L + ++     P++ +YN+L+ G CK+ R 
Sbjct: 129 IEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERP 188

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++  +  +++   G EPN ++YN L+ SL   G++ +A  L   M   D  P+  T+N++
Sbjct: 189 QDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLM 248

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G+ D A ++   M      P   +YN +I+  C   ++D   + L++M    C
Sbjct: 249 IDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGC 308

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN + + LC   +V EA+ + + L N            +I  LC+  +   A +
Sbjct: 309 PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEK 368

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM + G  PD   Y+ LI G C    ++++L  F  M +    P V  ++ ++  LC
Sbjct: 369 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 428

Query: 494 KSRRTDLSLEVFQMMIEKG 512
           KS R      + + M+E+G
Sbjct: 429 KSARVRDGCMLLKTMLERG 447



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 164/334 (49%), Gaps = 1/334 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +++DA L LE M+  G  P+VV    L+   CK   M +A+ +   M+ +   
Sbjct: 110 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 169

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L++  CK+       +L+++M  YG   N +TYN+L+  L   G    +   
Sbjct: 170 PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL 229

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++++   P+ FT++ +++   K   +  A +L   +  +G  P++ +YN++++G C+
Sbjct: 230 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACR 289

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R ++A +    +   G  P+VV+YN ++  LC   + +EA E+   +  G     +VT
Sbjct: 290 ANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVT 349

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
            + LI  L    + D A K+L EM +    P   +Y  +I   C   ++D  +    +M 
Sbjct: 350 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 409

Query: 371 HRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSL 403
            + C P   TY+  +  LC   +V++   +++++
Sbjct: 410 DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 149/304 (49%), Gaps = 4/304 (1%)

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           N LL+   ++ + +EA   F++       P+ ++Y+ L+   C    +++A  LL EM+ 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P    YN +I  L  +G+ D AL    +M +    PS  +Y  ++  LC   ++  
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISD 120

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVI 419
               L+ M    C PN  TYN L    C +G + EA  +   +  + + SP  F Y  +I
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML-ENSCSPDVFTYNILI 179

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              C++ +     +LL EM KYG  P+  TY++L+  L   G   +A  +  +M   D K
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P    FN ++   CK  + DL+ E+FQ+M ++G +P+  TY I++ G    + ++ + ++
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 540 LKEL 543
           L+ +
Sbjct: 300 LERM 303



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 63/122 (51%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A+   E + + G+  DVV  + L+  LCK+ ++  A K++  M  +G  PD  +YT
Sbjct: 327 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 386

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK   +  ++    +M D G     +TY+ ++  LC    +      L  ++++
Sbjct: 387 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 446

Query: 198 GL 199
           G+
Sbjct: 447 GV 448


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 219/460 (47%), Gaps = 1/460 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K +D    L  M   G   D+V    L+   C+   +++A ++M  M   G+ P   
Sbjct: 130 KDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLF 189

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N LCKKG    A  ++ +M + G   +T TYN+L+   C   N +++ +    +
Sbjct: 190 TYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 249

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G+VP+  ++S L+    + R +  A+    D+   G  P+ V Y VL+ G C+ G  
Sbjct: 250 LRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM 309

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA++   ++  +G   +V++YN +L  LC E    +A++L  EM      P   T+  L
Sbjct: 310 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G    AL +   M +   +P   +YN +I   C  G+++   +  D M  R+ 
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TY  L    C VG V EAF +   +  K           VI   CR G + +A +
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 489

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L  M   G  PD  +Y++LI G   E  +++A      ME+    PD+  +N ++ G C
Sbjct: 490 FLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFC 549

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           +  R   +  V + MIEKG  P+ +TYT L+ G   QD L
Sbjct: 550 RQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNL 589



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 194/402 (48%), Gaps = 11/402 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M++ G  PD      LL + C+ +   +A ++   M+  G++PD  S++ L+    +
Sbjct: 211 LIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSR 270

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             ++  A+     M+ +G   + V Y  L+ G C  GN+ ++L+  D ++++G V +   
Sbjct: 271 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 330

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +L    KE+ +  A KL D+++ +G  P+  ++  L+ G C++G   +A+  F  + 
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 390

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +  +P++V+YN L+   C  G  E+A+EL   M      P  +TY ILI +    G   
Sbjct: 391 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 450

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++ D M++   +P+  + N +I   C  G      + L +M  +   P+  +YN L 
Sbjct: 451 EAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 510

Query: 386 MLCGVGKVQE-----AFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMT 439
                G V+E     AF  I  +  K+   P    Y  V+   CR+G+  +A  +L +M 
Sbjct: 511 N----GFVREDNMDKAFLWINKM-EKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMI 565

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           + G  PD  TY++LI G   +  + EA      M +  + PD
Sbjct: 566 EKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 204/445 (45%), Gaps = 1/445 (0%)

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVG 150
           SKG+   +    +LL  L K + ++ A +V   +V SGI  +  +   +VN LCK G   
Sbjct: 76  SKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFD 135

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
                + +ME  G   + VTYN+L+   C  G L ++ + ++ +  KGL P+ FTY+ ++
Sbjct: 136 DVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAII 195

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
               K+     A  +L +++  G  P+  +YN LL   C+     EA   F ++  +G  
Sbjct: 196 NGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVV 255

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P++VS++ L+         ++A     +M      P  V Y +L+     +G    ALK+
Sbjct: 256 PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI 315

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
            DEM++        +YN I+  LC E  +    K  D+M  R   P+  T+  L    C 
Sbjct: 316 RDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQ 375

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            G + +A ++  ++  +        Y  +I   C+ G+  +A +L   M      P+  T
Sbjct: 376 DGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHIT 435

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y  LI   C  G + EA  ++ VM E   KP +   N ++ G C+S  +  + E    MI
Sbjct: 436 YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 495

Query: 510 EKGQMPNETTYTILVEGIAHQDELE 534
            KG  P+  +Y  L+ G   +D ++
Sbjct: 496 AKGVAPDHISYNTLINGFVREDNMD 520



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 214/479 (44%), Gaps = 55/479 (11%)

Query: 75  RDHKLNDAFLQLERMVSKG--HKPDVVQA-----------TNLLYDL-----CKANKMKK 116
           R  +L+DA   + RM+ +    + +VV+A            NL++DL      +A K+++
Sbjct: 7   RSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLRE 66

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
             +   ++ S G +   ++   L+  L K   V  A ++  ++   G   N  T N +V 
Sbjct: 67  GTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVN 126

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            LC  G  +    FL  +   G+  +  TY+ L+ A  +E  +  A ++++ +  KG KP
Sbjct: 127 ALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKP 186

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +L +YN ++ GLCK+GR   A     ++ + G  P+  +YN LL   C    + EA E+ 
Sbjct: 187 SLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIF 246

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM      P +V+++ LI   + +   D AL    +M K    P    Y  ++   C  
Sbjct: 247 GEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRN 306

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           G +   +K  D+M  + C                  V +  A                Y 
Sbjct: 307 GNMLEALKIRDEMLEQGC------------------VLDVIA----------------YN 332

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            ++  LC++     A +L  EM + G  PD YT+++LI G C +G + +AL +F  M + 
Sbjct: 333 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 392

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG---IAHQDE 532
           + KPD+  +N L+ G CK    + + E++  MI +   PN  TY IL+     + H  E
Sbjct: 393 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE 451



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 152/304 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + +A    + M+ +G   DV+    +L  LCK   +  A K+ + MV  G +PD  
Sbjct: 305 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 364

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++  C+ GN+  A+ L   M       + V YN+L+ G C +G + ++ +  D +
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I + + PN  TY  L+ A      V  A +L D +I KG KP LV+ N ++ G C+ G +
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 484

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A  F   + +KG  P+ +SYN L+     E   ++A   + +M+     P I+TYN++
Sbjct: 485 SKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVV 544

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G+   A  VL +M++    P  ++Y  +I    ++  ++   +  D+M  R  
Sbjct: 545 MNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGF 604

Query: 375 KPNE 378
            P++
Sbjct: 605 APDD 608



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 35/235 (14%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  +  A      M  +  KPD+V    L+   CK  +M+KA ++ + M+S  I P+  
Sbjct: 375 QDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHI 434

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N  C  G+V  A +L + M + G     VT N++++G C  G+ +++ +FL R+
Sbjct: 435 TYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 494

Query: 195 IQKG-----------------------------------LVPNAFTYSFLLEAAYKERGV 219
           I KG                                   L+P+  TY+ ++    ++  +
Sbjct: 495 IAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRM 554

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
             A  +L  +I KG  P+  +Y  L+ G   +    EA RF  ++  +GF P+ V
Sbjct: 555 QEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 227/468 (48%), Gaps = 2/468 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H ++D  L   RM+ K   P +     LL  + +      AI +   + S GI P  ++ 
Sbjct: 34  HTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATL 93

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+NC C + ++ +A  L+  +   G+  N VT+N+L+ G C+ G +++++ F   L+ 
Sbjct: 94  TILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMA 153

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG   + F+Y  L+    K      A++LL  +     +PNL++Y+ ++ GLCK+    +
Sbjct: 154 KGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIAD 213

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+R F  + S+G   +VV+YN L+   C  G+W EA  LL  M  G+ +P   T+NIL+ 
Sbjct: 214 ALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVD 273

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +L   G+   A  V   M+K   +P   +YN ++   C    V    +  ++M  R  +P
Sbjct: 274 ALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEP 333

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +   YN L    C +  V EA  + + +  K        Y  +I  LC+ G+     +L+
Sbjct: 334 DVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELV 393

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G +PD  TY+  +   C     E+A+ +F  + +  + PD   ++ ++   CK 
Sbjct: 394 DEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIW-PDFYMYDVIVENFCKG 452

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +  ++ E  Q ++  G  PN  TYTI++  +      + +  +L ++
Sbjct: 453 EKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKM 500



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 7/448 (1%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H+ H L+ AF  L  ++  G +P++V    L+   C    + KA+     +++ G   D 
Sbjct: 102 HQAH-LSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDE 160

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            SY  L+N LCK G    A+QL++KME+     N +TY++++ GLC    +  +L+    
Sbjct: 161 FSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSL 220

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  +G++ +   Y+ L+           A +LL  ++     P+  ++N+L+  LCKEGR
Sbjct: 221 VTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGR 280

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA   F  +  +G +P++V+YN L+   C+     EA EL   M      P ++ YN+
Sbjct: 281 IVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNV 340

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI         D A+ +  E+      P+ A+YN +I  LC  G++  V + +D+M  R 
Sbjct: 341 LINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400

Query: 374 CKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQ 430
             P+  TYN  L   C     ++A ++ + +   Q   P +FY Y  ++ + C+  K   
Sbjct: 401 QSPDIVTYNIFLDAFCKSKPYEKAISLFRQI--VQGIWP-DFYMYDVIVENFCKGEKLKI 457

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A + L  +  +G  P+  TY+ +I  LC +   +EA+ +   M++ D  PD   F  ++ 
Sbjct: 458 AEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIG 517

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            L +   TD + ++   MIE+G + +E 
Sbjct: 518 ALQERNETDKAEKLRLEMIERGLVNDEA 545



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 3/327 (0%)

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           ++ K   P +  ++ LL  + + G    AI  F  L SKG  P++ +  IL+   C +  
Sbjct: 46  MLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAH 105

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV-LDEMVKGRFRPSAASYN 347
              A  LL  +      P +VT+N LI     +G    A+   LD M KG +     SY 
Sbjct: 106 LSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG-YPLDEFSYG 164

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNK 406
            +I  LC  G+    ++ L +M     +PN  TY+  +  LC    + +A  +   + ++
Sbjct: 165 SLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSR 224

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  +I   C  G+  +A +LL  M +    PD YT++ L+  LC EG I EA
Sbjct: 225 GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEA 284

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             +F VM +   KPD+  +NAL+ G C S     + E+F  M+++G  P+   Y +L+ G
Sbjct: 285 QGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344

Query: 527 IAHQDELELSAEVLKELQLRQVVSESA 553
               D ++ +  + KE++ + +V   A
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLA 371


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 236/465 (50%), Gaps = 16/465 (3%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G+K DV    +LL  L K+    +  KV + ++ SG  P+  ++  L+   CK G    A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           ++ +  ++++    +   +N L+ GL   GN +Q+++  + +    + P+ FTY+ ++  
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 213 AYKERGVHAAMKLLDDIIAKGGK--PNLVSYNVLL-TGLCKEGRTEEAIRFFRDLPSKGF 269
             K   +  A +LL+++I +GGK  P++V+YN L+  G+CK+G  EEA+     +   G 
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            P+V++YN ++ +LC+ GR  EA E+L  M     SP +VT+N L+      G    AL+
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALE 258

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLC 388
           VL+EM +    P   +Y  ++  LC  G+V +    L+++  +   P+   Y  L   LC
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 318

Query: 389 GVGKVQEAFAIIQSLGNKQ--------NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMT 439
             G+++EA  +++ +  ++        N  P  F Y  V+  L + G   +A  L+ ++ 
Sbjct: 319 KSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 378

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G+ PD  TY++LI GLC    + EA ++   M      P+     +++ GLC+  R D
Sbjct: 379 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVD 438

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +  +   M  K   PN   YT L++G+   D ++ +  VL  ++
Sbjct: 439 DAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMR 483



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 233/481 (48%), Gaps = 16/481 (3%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           ++  G  P++V    L+   CKA +  +A++ +  +    + PD   + +L++ L K GN
Sbjct: 53  LLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGN 112

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG--LVPNAFTY 206
              A++L E ME      +  TYN+++ GLC  GNL ++ + L+ +I++G    P+  TY
Sbjct: 113 PDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTY 172

Query: 207 SFLLEAAY-KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           + L+ A   K+  V  A+++LD +   G  P++++YN ++  LC  GR  EA    + + 
Sbjct: 173 NTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS 232

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
                P++V++N LL   C  G    A E+L EM   +  P ++TY IL+  L   G+  
Sbjct: 233 CS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQ 289

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC---------KP 376
            A  +L+E+V+  + P   +Y  ++  LC  G+++   K + +M  R            P
Sbjct: 290 VAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVP 349

Query: 377 NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
              TYN  L  L   G + +A ++I  L  +        Y  +I  LC+  +  +A  L 
Sbjct: 350 PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLA 409

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G  P+  T  S++ GLC  G +++A  + V M    + P+V  + +L+ GLCKS
Sbjct: 410 DEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKS 469

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            R D +  V   M  +G   ++  Y  L+  + H   +  +  +  E+  R  + + +  
Sbjct: 470 DRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTS 529

Query: 556 R 556
           +
Sbjct: 530 K 530



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 214/420 (50%), Gaps = 16/420 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPD 132
           +D   + A    E M S    PD+     ++  LCK+  ++KA +++E M+  G    PD
Sbjct: 109 KDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPD 168

Query: 133 ASSYTYLVNC-LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
             +Y  L+N  +CK G+V  A+++++ M+  G   + +TYNS++  LC+ G + ++ + L
Sbjct: 169 IVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL 228

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +      P+  T++ LL+   K   +  A+++L+++  +   P++++Y +L+ GLC+ 
Sbjct: 229 KTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 285

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN---------ELLAEMDGG 302
           G+ + A     ++  +G+ P+V++Y  L+  LC  G  EEA+         E+LAEM   
Sbjct: 286 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSI 345

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           +  P + TYNI++G L   G    A+ ++ ++V   + P   +YN +I  LC   +V   
Sbjct: 346 NMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREA 405

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
               D+M    C PN+ T   +   LC VG+V +A++++  +  K+++     Y  +I  
Sbjct: 406 CDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDG 465

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC+  +   A  +L  M   G   D + Y  LI  +   G + EA+ ++  M    + PD
Sbjct: 466 LCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPD 525



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 194/398 (48%), Gaps = 18/398 (4%)

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
           E  GY  +  +YN L+  L   G+  ++ +    L+  G  PN  T+  L+    K    
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A++ L  +      P++  +N L+ GL K+G  ++A++ F ++ S    P++ +YN +
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 280 LRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIGS-LAYHGKTDHALKVLDEMVK 336
           +  LC  G  E+A ELL EM   GG  +P IVTYN LI + +   G  + AL++LD M  
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQE 395
               P   +YN II  LC  G+V    + L  M    C P+  T+N L    C  G +  
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPR 255

Query: 396 AFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           A  +++ +  ++N  P    Y  ++  LCR G+   AF LL E+ + G+ PD   Y+SL+
Sbjct: 256 ALEVLEEM-CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 314

Query: 455 RGLCMEGLIEE---------ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
            GLC  G IEE         A EI   M   +  P +  +N +L GL K      ++ + 
Sbjct: 315 DGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI 374

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             ++ +G +P+  TY  L++G+   + +  + ++  E+
Sbjct: 375 SDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEM 412



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 170/323 (52%), Gaps = 7/323 (2%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G K ++ SYN LL  L K G      + ++DL   G  PN+V++ IL+R  C  G+   A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            E L  +D    +P +  +N LI  L   G  D A+K+ + M   R  P   +YN +I+ 
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 353 LCSEGKVDLVVKCLDQMFHR--RCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQN 408
           LC  G ++   + L++M  R  +  P+  TYN L  A +C  G V+EA  I+  +     
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +     Y  +I +LC  G+  +A ++L  M+    +PD  T+++L+ G C  G++  ALE
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALE 258

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   M   +  PDV  +  L+ GLC+  +  ++  + + ++ +G +P+   YT LV+G+ 
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 318

Query: 529 HQDELELSAEVLKELQLRQVVSE 551
              E+E + +++KE+  R++++E
Sbjct: 319 KSGEIEEAHKLVKEMSAREILAE 341



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 35/174 (20%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP--- 131
           +D  ++ A   +  +V++G+ PDVV    L+  LCKAN++++A  + + M S G  P   
Sbjct: 363 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDV 422

Query: 132 ----------------DASS----------------YTYLVNCLCKKGNVGYAMQLVEKM 159
                           DA S                YT L++ LCK   +  A  +++ M
Sbjct: 423 TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAM 482

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
              G   +   Y  L+  +   G + +++   D ++ +G +P+  T   L EAA
Sbjct: 483 RGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAA 536


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 244/523 (46%), Gaps = 54/523 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K++DA   L+ M+  G K ++    +L+   CK  ++ +A  V+  MV   + PD+ 
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 403

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++  C++G+   A  L +KM   G     +TYN+L++GLC +G  + +LQ    +
Sbjct: 404 SYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM 463

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G+ P+   YS LL+  +K      A  L  DI+A+G   + +++N +++GLCK G+ 
Sbjct: 464 MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKM 523

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA   F  +   G  P+ ++Y  L+   C      +A ++   M+    SP+I  YN L
Sbjct: 524 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSL 583

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    +      +L EM      P+  +Y  +I   C EG +D   K     F    
Sbjct: 584 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD---KAFSSYF---- 636

Query: 375 KPNEGTYNGLA---MLCG--------VGKVQEA-------------------------FA 398
              E T NGL+   ++C         +G++ EA                         +A
Sbjct: 637 ---EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA 693

Query: 399 IIQSLGNKQNSSPQEF-------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            IQ + +  + S + F       Y   I  LC+ GK   A +    ++  GF PD++TY 
Sbjct: 694 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 753

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LI G    G ++EA  +   M      P++  +NAL+ GLCKS   D +  +F  + +K
Sbjct: 754 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           G  PN  TY  L++G      ++ +A  LK+  + + +S S V
Sbjct: 814 GLFPNVVTYNTLIDGYCKIGNMD-AAFKLKDKMIEEGISPSVV 855



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 222/458 (48%), Gaps = 6/458 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A    + M   G  P +    +LL +L K  +   A  V + M+  GI+PD    + +V
Sbjct: 174 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 233

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N  CK G V  A   V+KME+ G   N VTY+SL+ G   LG++  +   L  + +KG+ 
Sbjct: 234 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 293

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIR 259
            N  TY+ L++   K+  +  A K+L  +  +    P+  +Y VL+ G C+ G+ ++A+R
Sbjct: 294 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 353

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              ++   G + N+   N L+   C  G   EA  ++  M   +  P   +YN L+    
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 413

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G T  A  + D+M++    P+  +YN ++  LC  G  D  ++    M  R   P+E 
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 473

Query: 380 TYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            Y+ L  L G+ K++    A  + + +  +  +  +  +  +I+ LC+ GK  +A ++  
Sbjct: 474 GYSTL--LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M   G +PD  TY +LI G C    + +A ++   ME     P ++ +N+L+ GL KSR
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 591

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           R     ++   M  +G  PN  TY  L++G   +  L+
Sbjct: 592 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 219/448 (48%), Gaps = 2/448 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+++A   +++M + G +P++V   +L+        ++ A  V++ M   G+  +  
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +YT L+   CK+  +  A +++  M E+     +   Y  L+ G C  G ++ +++ LD 
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ GL  N F  + L+    K   +H A  ++  ++    KP+  SYN LL G C+EG 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T EA      +  +G EP V++YN LL+ LC  G +++A ++   M     +P  V Y+ 
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L      + A  +  +++   F  S  ++N +I+ LC  GK+    +  D+M    
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+  TY  L    C    V +AF +  ++  +  S   E Y  +I+ L +  +  +  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 597

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            LL EM   G TP+  TY +LI G C EG++++A   +  M E     ++   + ++ GL
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            +  R D +  + Q M++ G  P+   +
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECF 685



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 228/513 (44%), Gaps = 34/513 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   ++AF   ++M+ +G +P V+    LL  LC+      A+++  +M+  G+ PD  
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 473

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y+ L++ L K  N   A  L + +   G+  + +T+N+++ GLC +G + ++ +  D++
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G  P+  TY  L++   K   V  A K+   +  +   P++  YN L++GL K  R 
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 593

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            E      ++  +G  PN+V+Y  L+   C EG  ++A     EM     S  I+  + +
Sbjct: 594 VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 315 IGSLAYHGKTDHA--------------------------------LKVLDEMVKGRFRPS 342
           +  L   G+ D A                                   LDE  K    P+
Sbjct: 654 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPN 713

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
              YN  IA LC  GKVD   +    +  +   P+  TY  L       G V EAF +  
Sbjct: 714 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRD 773

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  +        Y  +I  LC+     +A +L +++ + G  P+  TY++LI G C  G
Sbjct: 774 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 833

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++ A ++   M E    P V  ++AL+ GLCK    + S+++   MI+ G       Y 
Sbjct: 834 NMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYC 893

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            LV+G     E++   ++   + +R  +S +A+
Sbjct: 894 TLVQGYIRSGEMQKIHKLYDMMHIR-CLSTTAI 925



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 210/438 (47%), Gaps = 12/438 (2%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK---KGNVGYAMQLVEKMEDYGY-PTNTV 169
           +K   K++ ++    +  +  +Y   +  LCK   +GNV +  +LV    ++ + PT   
Sbjct: 102 VKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWD-ELVGVYREFAFSPT--- 157

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            ++ +++     G    +L   D + + G +P+  + + LL    K    H A  +   +
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           I  G  P++   ++++   CK+G+ +EA  F + + + G EPN+V+Y+ L+      G  
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNP 348
           E A  +L  M     S  +VTY +LI       K D A KVL  M  +    P   +Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I   C  GK+D  V+ LD+M     K N    N L    C  G++ EA  +I  + +  
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD-W 396

Query: 408 NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           N  P  + Y  ++   CR+G T +AF L  +M + G  P   TY++L++GLC  G  ++A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L+I+ +M +    PD   ++ LL GL K    + +  +++ ++ +G   +  T+  ++ G
Sbjct: 457 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516

Query: 527 IAHQDELELSAEVLKELQ 544
           +    ++  + E+  +++
Sbjct: 517 LCKMGKMVEAEEIFDKMK 534



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 32/270 (11%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPD---------------------------VVQATNLLY 106
           +R  ++++A L +++MV  G  PD                            +   N++Y
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 107 D-----LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           +     LCK  K+  A +   M+   G +PD  +Y  L++     GNV  A +L ++M  
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   N VTYN+L+ GLC   N++++ +   +L QKGL PN  TY+ L++   K   + A
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A KL D +I +G  P++V+Y+ L+ GLCK G  E +++    +   G +  ++ Y  L++
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
                G  ++ ++L   M     S T +++
Sbjct: 898 GYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 231/481 (48%), Gaps = 1/481 (0%)

Query: 66  PGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
           P  N       + ++DA      +++    P V+Q   ++  + K      AI +++ MV
Sbjct: 52  PKQNAKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMV 111

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
             G+ P   + +  +NC C  G +G+A  ++  +   GY  N +T  ++++GLC+ G + 
Sbjct: 112 FKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQ 171

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           +++ F D +  +G++ +   Y  L+    K      A +LL ++  +  KPN+V YN+++
Sbjct: 172 KAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMII 231

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
              CK+  T +A   +  +   G +P++++Y  L+R  C  G+W E  +L+ EM   + +
Sbjct: 232 DSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNIN 291

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P + T+N+LI +    GK   A  + + MVK   +P   ++N +I+  C  G V    K 
Sbjct: 292 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 351

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
            D +F R   P+  +Y  L +  C   ++ EA ++   +  K        Y  +I  LC+
Sbjct: 352 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 411

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G+   A++L   +   G  P+  TY+ LI   C    I+  +E+F +M      P V  
Sbjct: 412 SGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLT 471

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N L+ G CKS+R   ++ +  +M  K   P+  TY  L +G+     +  + E+ K + 
Sbjct: 472 YNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMH 531

Query: 545 L 545
           +
Sbjct: 532 V 532



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 122/249 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K+ +A      MV +G +PD+V    L+   C    + +A K+ + +   GI+
Sbjct: 302 DAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGIL 361

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SYT L+   CK   +  A+ L  +M       + V Y+SL+ GLC  G ++ + + 
Sbjct: 362 PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 421

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G  PN  TY+ L++A  K + +   ++L   +  KG  P +++YN+L+ G CK
Sbjct: 422 FSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCK 481

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R  EA+     + SK   P+ ++YN L   LC  GR  +A EL   M  G     + T
Sbjct: 482 SKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVAT 541

Query: 311 YNILIGSLA 319
           YN+L+ +  
Sbjct: 542 YNVLLDAFC 550



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 35/307 (11%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           ++V  G  PD++  T+L+   C+  +  +  ++M  MV+  I P+  ++  L++  C+KG
Sbjct: 249 KIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG 308

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A  +   M   G   + VT+N+L+ G C+ GN+ ++ +  D + ++G++P+ ++Y+
Sbjct: 309 KMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYT 368

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAK----------------------------------- 232
            L+    K + +  A+ L +++  K                                   
Sbjct: 369 ILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND 428

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G  PN+++YN+L+   CK    +  I  F+ +  KG  P V++YNIL+   C   R  EA
Sbjct: 429 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 488

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL+ M   + +P  +TYN L   L   G+   A ++   M  G      A+YN ++  
Sbjct: 489 MNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDA 548

Query: 353 LCSEGKV 359
            C    V
Sbjct: 549 FCKAQDV 555



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 35/200 (17%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + +  +G  PDV   T L+   CK  ++ +A+ +   M    ++ D   Y+ L++ LCK
Sbjct: 352 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 411

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G + YA +L   + + G P N +TYN L+   C + +++  ++    +  KGL P   T
Sbjct: 412 SGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLT 471

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAK--------------------------------- 232
           Y+ L+    K + +  AM LL  + +K                                 
Sbjct: 472 YNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMH 531

Query: 233 -GGKP-NLVSYNVLLTGLCK 250
            GG P ++ +YNVLL   CK
Sbjct: 532 VGGPPVDVATYNVLLDAFCK 551



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 1/162 (0%)

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + +A  +   L N Q       +  +I S+ +      A  LL +M   G TP  +T S 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
            I   C  G +  A  +  ++ +  Y+P+      ++ GLC +     +++    +  +G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            + +E  Y  L+ G+        + ++L+E++  QVV  + V
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEME-GQVVKPNIV 225


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 240/474 (50%), Gaps = 14/474 (2%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL- 155
           D V  T  + DLC+     ++ ++   ++          Y  L+N L + G V    Q+ 
Sbjct: 154 DSVADTLFVLDLCRKMNKDESFELKYKLI-------IGCYNTLLNSLARFGLVDEMKQVY 206

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +E +ED   P N  TYN +V G C +GN+ ++ Q++  +++ GL P+ FTY+ L+    +
Sbjct: 207 MEMLEDKVCP-NIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQ 265

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            + + +A K+  ++  KG + N V+Y  L+ GLC E R +EA+  F  +      P V +
Sbjct: 266 RKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRT 325

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y +L+++LC   R  EA  L+ EM+     P I TY +LI SL    K + A ++L +M+
Sbjct: 326 YTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQML 385

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +    P+  +YN +I   C  G ++  +  ++ M  R  +PN  TYN L        V +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHK 445

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  ++  +  ++       Y  +I   CR G    A++LL  M   G  PD +TY+S+I 
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMID 505

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
            LC    +EEA ++F  +E+ D  P+V  + AL+ G CK+ + + +  + + M+ K  +P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLP 565

Query: 516 NETTYTILVEGIAHQDELE---LSAEVLKELQLRQVVSESA--VERLVMQYDFE 564
           N  T+  L+ G+    +L+   L  E + ++ L+  VS     + RL+   DF+
Sbjct: 566 NSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 239/496 (48%), Gaps = 20/496 (4%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + ++++A     +M      P V   T L+  LC + +  +A+ +++ M   GI P+  +
Sbjct: 301 ERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT 360

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L++ LC +  +  A +L+ +M + G   N +TYN+L+ G C  G +  +L  ++ + 
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            + L PN  TY+ L++  Y +R VH AM +L+ ++ +   P++V+YN L+ G C+ G  +
Sbjct: 421 SRNLRPNTRTYNELIK-GYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A R    +  +G  P+  +Y  ++ SLC   R EEA +L   ++  D  P +V Y  LI
Sbjct: 480 SAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALI 539

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 GK + A  +L++M+     P++ ++N +I  LC++GK+       ++M     +
Sbjct: 540 DGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQ 599

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P   T   L   L   G    A+   Q + +         Y   I + CR+G+   A  +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDM 659

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL---- 490
           + +M + G +PD +TYSSLI+G    G    A  +   M +   +P    F +L+     
Sbjct: 660 VAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE 719

Query: 491 -----------GLC---KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
                      G+C        D+ +E+ + M+E G  PN  +Y  L+ GI     L ++
Sbjct: 720 MKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVA 779

Query: 537 AEVLKELQLRQVVSES 552
            +V   +Q ++ +S S
Sbjct: 780 EKVFDHMQQKEGISPS 795



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 223/451 (49%), Gaps = 4/451 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P++     ++   CK   +++A + + M+V +G+ PD  +YT L+   C++ ++  A ++
Sbjct: 216 PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            ++M   G   N V Y  L+ GLC+   +++++    ++      P   TY+ L++A   
Sbjct: 276 FKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCG 335

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                 A+ L+ ++  KG KPN+ +Y VL+  LC + + E+A      +  KG  PNV++
Sbjct: 336 SERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVIT 395

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH-ALKVLDEM 334
           YN L+   C  G  E+A +++  M+  +  P   TYN LI    Y  +  H A+ VL++M
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIK--GYCKRNVHKAMGVLNKM 453

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKV 393
           ++ +  P   +YN +I   C  G  D   + L  M  R   P+  TY  +   LC   +V
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRV 513

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +EA  +  SL  K        Y  +I   C+ GK  +A  +L +M      P+S T+++L
Sbjct: 514 EEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNAL 573

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I GLC +G ++EA  +   M + D +P V     L+  L K    D +   FQ M+  G 
Sbjct: 574 IHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGT 633

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            P+  TYT  ++    +  L+ + +++ +++
Sbjct: 634 KPDAHTYTTFIQTYCREGRLQDAEDMVAKMK 664



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 222/475 (46%), Gaps = 37/475 (7%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +V  G  PD    T+L+   C+   +  A KV + M   G   +  +YT+L++ LC +  
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERR 303

Query: 149 VGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +  AM L  KM +D  YPT   TY  L++ LC     +++L  +  + +KG+ PN  TY+
Sbjct: 304 IDEAMDLFVKMKDDDCYPT-VRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+++   +  +  A +LL  ++ KG  PN+++YN L+ G CK G  E+A+     + S+
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422

Query: 268 GFEPN----------------------------------VVSYNILLRSLCMEGRWEEAN 293
              PN                                  VV+YN L+   C  G ++ A 
Sbjct: 423 NLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            LL+ M+     P   TY  +I SL    + + A  + D + +    P+   Y  +I   
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C  GKV+     L++M  + C PN  T+N L   LC  GK++EA  + + +         
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                +I  L + G    A++   +M   G  PD++TY++ I+  C EG +++A ++   
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           M+E    PD+  +++L+ G     RT+ +  V + M + G  P++ T+  L++ +
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL 717



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 232/486 (47%), Gaps = 20/486 (4%)

Query: 61  KPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           +PN +  N     +    ++ A   L +M+ +   PDVV   +L+   C++     A ++
Sbjct: 425 RPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           + +M   G++PD  +YT +++ LCK   V  A  L + +E      N V Y +L+ G C 
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCK 544

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            G +N++   L++++ K  +PN+ T++ L+     +  +  A  L + ++    +P + +
Sbjct: 545 AGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVST 604

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
             +L+  L K+G  + A R F+ + S G +P+  +Y   +++ C EGR ++A +++A+M 
Sbjct: 605 DTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMK 664

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE--GK 358
               SP + TY+ LI      G+T+ A  VL  M      PS  ++  +I  L     GK
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGK 724

Query: 359 V----------------DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
           V                D+VV+ L++M      PN  +Y  L + +C +G ++ A  +  
Sbjct: 725 VKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFD 784

Query: 402 SLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            +  K+  SP E  +  +++  C+  K  +A +++ +M   G  P   +   LI  L  +
Sbjct: 785 HMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKK 844

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G  E    +F  + +  Y  D   +  ++ G+ K    +   E+F +M + G   +  TY
Sbjct: 845 GEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTY 904

Query: 521 TILVEG 526
           ++L+EG
Sbjct: 905 SLLIEG 910


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 231/473 (48%), Gaps = 1/473 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +  KG  P +   T LL  L KAN++KK+ +V + +   GIIPD   ++ ++N  CK   
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ L  KME  G   N VTYN+++ GLC  G L+++ +F ++++++ + P+  TYS 
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSV 331

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            +    K   +  A  +L ++   G  PN V YN L+ G CK G   EA++   D+ SKG
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN V+ N L++  C   +  +A  +L EM G        +++++I  L    +   AL
Sbjct: 392 ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTAL 451

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
             + EM+    RP+      +++ LC  GK    V+   ++  +   PN  T N L   L
Sbjct: 452 HFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGL 511

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G +QE   +++ +  +     +  Y  +I+  C++GK  + F+L  EM K G  PD 
Sbjct: 512 CKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDI 571

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           YT++ L+ GLC    I+EA  ++   ++  Y P+V  +  ++ G CK+ + +    +   
Sbjct: 572 YTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNE 631

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           ++ K    N   Y  L+        +  +  +  +++ R V+   A    +M 
Sbjct: 632 LVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMH 684



 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 246/516 (47%), Gaps = 38/516 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + H+ +DA     +M   G  P+VV   N+++ LCK+ ++ +A +  E MV   + P   
Sbjct: 268 KGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLI 327

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+  +N L K   +  A  ++++M + G+  N V YN+L+ G C +GN++++L+  D +
Sbjct: 328 TYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDM 387

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG--------------------- 233
           + KG+ PN+ T + L++   K   +  A  +L+++I +G                     
Sbjct: 388 LSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRF 447

Query: 234 --------------GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
                          +PN      L++GLCK G+  EA+  +  L  KGF PN+V+ N L
Sbjct: 448 VTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNAL 507

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +  LC  G  +E  +LL +M         +TYN LI      GK     ++ +EMVK   
Sbjct: 508 IHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGI 567

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM--LCGVGKVQEAF 397
           +P   ++N ++  LC+  K+D   +   +       PN  TY G+ +   C   KV+E  
Sbjct: 568 QPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTY-GVMIDGYCKANKVEEGE 626

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            ++  L +K+       Y  +I + C  G    AF+L  +M   G      TYSSL+ GL
Sbjct: 627 NLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGL 686

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  GL+++A  +   M +    P+V  +  ++ G  K  + +    V Q M      PN+
Sbjct: 687 CNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNK 746

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            TYTI+++G     + + +A++L E+  + ++ ++ 
Sbjct: 747 FTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAV 782



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 225/454 (49%), Gaps = 4/454 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A    + M+SKG  P+ V   +L+   CK++++ +A  V+E M+  G+  +  S++ 
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LC K     A+  + +M       N     +LV GLC  G   ++++   RL+ KG
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
            VPN  T + L+    K   +   +KLL D++ +G   + ++YN L++G CKEG+ +E  
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGF 556

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
               ++  KG +P++ ++N+LL  LC   + +EA+ L  E       P + TY ++I   
Sbjct: 557 ELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGY 616

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               K +    +L+E+V  +   ++  YN +I   C  G ++   +  D M  R    + 
Sbjct: 617 CKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSC 676

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            TY+ L   LC +G V +A  ++  +  K+   P    Y  +I    + G+  +   +L 
Sbjct: 677 ATYSSLMHGLCNIGLVDDAKHLLDEM-RKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQ 735

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM+ +   P+ +TY+ +I G C  G  +EA ++   M E    PD   +NA   GLCK  
Sbjct: 736 EMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEG 795

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
           + + + +V   M       +E TYT L++G  HQ
Sbjct: 796 KVEEAFKVCDEMSSGAVCLDEITYTTLIDG-CHQ 828



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 224/467 (47%), Gaps = 1/467 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A   L+ M   G  P+ V    L+   CK   + +A+K+ + M+S GI P++ +  
Sbjct: 341 KIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLN 400

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK   +G A  ++E+M   G P N  +++ ++  LC+      +L F+  ++ +
Sbjct: 401 SLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLR 460

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L PN    + L+    K      A++L   ++ KG  PN+V+ N L+ GLCK G  +E 
Sbjct: 461 NLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQET 520

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++  RD+  +G   + ++YN L+   C EG+ +E  EL  EM      P I T+N+L+  
Sbjct: 521 LKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K D A ++  E  K  + P+  +Y  +I   C   KV+     L+++  ++ + N
Sbjct: 581 LCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELN 640

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              YN L    C  G +  AF +   + ++        Y  ++  LC  G    A  LL 
Sbjct: 641 SVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLD 700

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G  P+   Y+++I G    G + +   +   M  ++  P+   +  ++ G CK  
Sbjct: 701 EMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +T  + ++   M EKG +P+  TY     G+  + ++E + +V  E+
Sbjct: 761 KTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEM 807



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 201/446 (45%), Gaps = 41/446 (9%)

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
           G+A  +   +   G   +  T   L+  L     L +S +  D +   G++P+   +S +
Sbjct: 203 GFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTM 262

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           + A  K      A+ L   +   G  PN+V+YN ++ GLCK GR +EA RF   +  +  
Sbjct: 263 INAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKV 322

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            P++++Y++ +  L    + +EAN +L EM      P  V YN LI      G    ALK
Sbjct: 323 SPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALK 382

Query: 330 VLDEMVKGRFRPSAASYNPIIARLC----------------------SEGKVDLVVK--C 365
           + D+M+     P++ + N +I   C                      ++G   +V+   C
Sbjct: 383 IRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLC 442

Query: 366 LD-----------QMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
           L            +M  R  +PN+G    L + LC  GK  EA  +   L  K       
Sbjct: 443 LKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIV 502

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
               +I  LC+ G   +  +LL +M + G   D  TY++LI G C EG ++E  E+   M
Sbjct: 503 TSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEM 562

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            +   +PD+  FN LL GLC + + D +  ++    + G +PN  TY ++++G    +++
Sbjct: 563 VKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKV 622

Query: 534 E-----LSAEVLKELQLRQVVSESAV 554
           E     L+  V K+L+L  VV  S +
Sbjct: 623 EEGENLLNELVSKKLELNSVVYNSLI 648



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 137/276 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ + F   E MV KG +PD+     LL+ LC A+K+ +A ++      +G +P+  
Sbjct: 548 KEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  CK   V     L+ ++       N+V YNSL+R  C+ GN+N + +  D +
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G++ +  TYS L+        V  A  LLD++  +G  PN+V Y  ++ G  K G+ 
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQM 727

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +     +++ S    PN  +Y I++   C  G+ +EA +LL EM      P  VTYN  
Sbjct: 728 NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAF 787

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
              L   GK + A KV DEM  G       +Y  +I
Sbjct: 788 TNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 158/337 (46%), Gaps = 1/337 (0%)

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
           +K  G   A  +   +  KG  P+L +   LL+ L K    +++   +  +   G  P+V
Sbjct: 197 FKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDV 256

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
             ++ ++ + C   R ++A  L ++M+    +P +VTYN +I  L   G+ D A +  ++
Sbjct: 257 HLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEK 316

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           MVK +  PS  +Y+  I  L    K+D     L +M      PNE  YN L    C +G 
Sbjct: 317 MVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + EA  I   + +K  S        +I   C+  +  QA  +L EM   G   +  ++S 
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +I  LC++     AL     M   + +P+      L+ GLCK+ +   ++E++  ++ KG
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            +PN  T   L+ G+     ++ + ++L+++  R +V
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLV 533



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++N   + L+ M S    P+    T ++   CK  K K+A K++  M   GI+PDA +Y 
Sbjct: 726 QMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYN 785

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
              N LCK+G V  A ++ ++M       + +TY +L+ G
Sbjct: 786 AFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 221/435 (50%), Gaps = 37/435 (8%)

Query: 94  HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           +K  V+    LL  L K N+      V + M+   I P+  ++  ++N LCK G +  A 
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ---FLDRLIQKGLVPNAFTYSFLL 210
            +V+ M+ +G+  N VTYN+L+ G C +G + +  +    L  +++  + PN+ T++ L+
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLI 310

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           +   K+  + AA+K+ +++ ++G KP +V+YN L+ GLC EG+  EA     ++ S   +
Sbjct: 311 DGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLK 370

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           PNV++YN L+   C +   EEA EL   +     +P ++T+N L+      GK + A  +
Sbjct: 371 PNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL 430

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV 390
              M++  F P+A++YN +I   C EGK++ V   L++M  R  K +  TYN L      
Sbjct: 431 QKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNIL------ 484

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
                                       I++ C K +  +A +L+ EM   G  P   TY
Sbjct: 485 ----------------------------ISAWCEKKEPKKAARLIDEMLDKGLKPSHLTY 516

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + L+ G CMEG +  AL +   ME+     +V  +N L+ G C+  + + +  +   M+E
Sbjct: 517 NILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLE 576

Query: 511 KGQMPNETTYTILVE 525
           KG +PN TTY I+ E
Sbjct: 577 KGLIPNRTTYEIIKE 591



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 180/376 (47%), Gaps = 37/376 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCK---ANKMKKAIKVMEMMVSSGIIPDAS 134
           KLN A   ++ M   G  P+VV    L+   CK     KM KA  +++ MV + + P++ 
Sbjct: 245 KLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSV 304

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++  CK  N+  A+++ E+M+  G     VTYNSLV GLC  G LN++   LD +
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   L PN  TY+ L+    K++ +  A +L D+I  +G  PN++++N LL G CK G+ 
Sbjct: 365 LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKM 424

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA    + +  KGF PN  +YN L+   C EG+ EE   LL EM         VTYNIL
Sbjct: 425 EEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNIL 484

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +     +   A +++DEM+    +PS  +YN ++   C EG +   +    QM     
Sbjct: 485 ISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             N  TYN L                                  I   CRKGK   A  L
Sbjct: 545 WANVVTYNVL----------------------------------IQGYCRKGKLEDANGL 570

Query: 435 LYEMTKYGFTPDSYTY 450
           L EM + G  P+  TY
Sbjct: 571 LNEMLEKGLIPNRTTY 586



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 171/341 (50%), Gaps = 6/341 (1%)

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL A  KE        +  ++I +   PNL+++N ++ GLCK G+  +A     D+   G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260

Query: 269 FEPNVVSYNILLRSLCMEGR---WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           F PNVV+YN L+   C  GR     +A+ +L EM     SP  VT+N+LI          
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            ALKV +EM     +P+  +YN ++  LC+EGK++     LD+M     KPN  TYN L 
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C    ++EA  +  ++G KQ  +P    +  ++   C+ GK  +AF L   M + GF
Sbjct: 381 NGYCKKKLLEEARELFDNIG-KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGF 439

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P++ TY+ LI G C EG +EE   +   M+    K D   +N L+   C+ +    +  
Sbjct: 440 LPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAAR 499

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +   M++KG  P+  TY IL+ G   +  L  +  + K+++
Sbjct: 500 LIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 188/396 (47%), Gaps = 4/396 (1%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
            ++  ++  DY Y  + ++ N L+  L               +I++ + PN  T++ ++ 
Sbjct: 179 GLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVIN 238

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE---AIRFFRDLPSKG 268
              K   ++ A  ++DD+   G  PN+V+YN L+ G CK GR  +   A    +++    
Sbjct: 239 GLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENK 298

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN V++N+L+   C +     A ++  EM      PT+VTYN L+  L   GK + A 
Sbjct: 299 VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAK 358

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
            +LDEM+    +P+  +YN +I   C +  ++   +  D +  +   PN  T+N L    
Sbjct: 359 VLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGY 418

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK++EAF + + +  K        Y  +I   CR+GK  +   LL EM   G   D+
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ LI   C +   ++A  +   M +   KP    +N LL G C       +L + + 
Sbjct: 479 VTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQ 538

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M ++G+  N  TY +L++G   + +LE +  +L E+
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM 574



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 154/283 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  L+ A    E M S+G KP VV   +L+  LC   K+ +A  +++ M+SS + P+  
Sbjct: 315 KDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N  CKK  +  A +L + +   G   N +T+N+L+ G C  G + ++      +
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG +PNA TY+ L+    +E  +     LL+++  +G K + V+YN+L++  C++   
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A R   ++  KG +P+ ++YNILL   CMEG    A  L  +M+   R   +VTYN+L
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVL 554

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           I      GK + A  +L+EM++    P+  +Y  I   +  +G
Sbjct: 555 IQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 208/459 (45%), Gaps = 53/459 (11%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY-----GYPTN 167
           K K  I  +  ++ SG +       Y  N   ++ NV Y+++L+ ++ +       YP  
Sbjct: 68  KFKSPIDFLHQLMGSGDVDPLLVLRYF-NWSRRELNVNYSIELICRLLNLLANAKHYPKI 126

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
               +S V+G     N + SL F    +  G        + +L  AY E   ++   L  
Sbjct: 127 RSILDSFVKGE---TNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVE---NSKTVLGL 180

Query: 228 DIIAKGG----KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +   + G    K +++S N LL+ L KE         ++++  +   PN++++N ++  L
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGL 240

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK---VLDEMVKGRFR 340
           C  G+  +A +++ +M      P +VTYN LI      G+     K   +L EMV+ +  
Sbjct: 241 CKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVS 300

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAII 400
           P++ ++N +I   C +  +   +K  ++M  +  KP   TYN L                
Sbjct: 301 PNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL---------------- 344

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
                             +  LC +GK  +A  LL EM      P+  TY++LI G C +
Sbjct: 345 ------------------VNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKK 386

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            L+EEA E+F  + +    P+V  FN LL G CK  + + +  + ++M+EKG +PN +TY
Sbjct: 387 KLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTY 446

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
             L+ G   + ++E    +L E+Q R V +++    +++
Sbjct: 447 NCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILI 485


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 226/466 (48%), Gaps = 5/466 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
             L  E+M+     PDV     +L  L   N + KA++V  MM   GI P  ++Y  +++
Sbjct: 186 CLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLH 245

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK G V  A+ LV KM++ G   + VT+N L+ GL   G L Q+   +  + + GL  
Sbjct: 246 SFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRV 305

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           + +TY+ L+    K+  +  A+ L ++++ +G  P + S+N ++ G CKEG+  +A +  
Sbjct: 306 SPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQL 365

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            D+  K   P+++SYN L+   C  G   EA  LL E+   + S  IVTYN LI  L   
Sbjct: 366 SDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRL 425

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G  + ALK+ ++M+     P   +Y  ++   C  G + +  +  D+M H    P++  Y
Sbjct: 426 GDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAY 485

Query: 382 NGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
              A + G   +G   +AF + + +  K        Y   +  LC+ G   +A +LL +M
Sbjct: 486 T--ARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKM 543

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            + G  PD  TY+S +      G + E  EIF  M      P V  +  L+     + R 
Sbjct: 544 IRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRL 603

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           D ++  F  M EKG +PN  TY +L+ G     +++ + +   E+Q
Sbjct: 604 DWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQ 649



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 186/380 (48%), Gaps = 1/380 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A    E MV++G  P V     ++Y  CK  KM  A + +  M+   ++PD  SY  
Sbjct: 323 LVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNT 382

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C+ GN+G A  L++++       N VTYN+L+ GLC LG+L  +L+  + +I +G
Sbjct: 383 LIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG 442

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+  TY+ L+  A K   +  A +  D+++  G  P+  +Y   + G  K G T +A 
Sbjct: 443 IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAF 502

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +   ++ +KGF P+V++YN+ +  LC  G  EEA ELL +M      P  VTY   + + 
Sbjct: 503 KLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAH 562

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +G      ++  +M+     P+  +Y  +I      G++D  +    +M  +   PN 
Sbjct: 563 MENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNV 622

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L    C V K+ +A      +  K     +  Y  +I   C  GK  +A +L  +
Sbjct: 623 ITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQ 682

Query: 438 MTKYGFTPDSYTYSSLIRGL 457
           M      PDS T+ +L++ L
Sbjct: 683 MLGKRIRPDSCTHGALLKKL 702



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 215/442 (48%), Gaps = 15/442 (3%)

Query: 116 KAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
           + + V E M+ +  +PD  +   ++  L  K  +  A+++   M +YG      TYN+++
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
              C  G + ++L  + ++ ++G  P+  T++ L+    K+  +  A  L+ ++   G +
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLR 304

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
            +  +YN L+ G CK+G   EA+  + ++ ++G  P V S+N ++   C EG+  +A + 
Sbjct: 305 VSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQ 364

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP---SAASYNPIIAR 352
           L++M   +  P I++YN LI      G    A  +LDE+   RFR    +  +YN +I  
Sbjct: 365 LSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDEL---RFRNLSFNIVTYNTLIDG 421

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQN 408
           LC  G ++  +K  + M +R   P+  TY    NG   L  +   +E F  +  +G    
Sbjct: 422 LCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG---- 477

Query: 409 SSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            +P +F Y   I    + G T +AF+L  EM   GF PD  TY+  + GLC  G +EEA 
Sbjct: 478 LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAG 537

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           E+   M    + PD   + + +    ++       E+F  M+ +GQ P   TYT+L+   
Sbjct: 538 ELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAH 597

Query: 528 AHQDELELSAEVLKELQLRQVV 549
           A    L+ +     E+Q + VV
Sbjct: 598 ALNGRLDWAMAYFLEMQEKGVV 619



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 173/334 (51%), Gaps = 2/334 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K++DA  QL  M+ K   PD++    L+Y  C+   + +A  +++ +    +  +  
Sbjct: 354 KEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIV 413

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LC+ G++  A++L E M + G   + VTY  LV G C LGN+  + +F D +
Sbjct: 414 TYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEM 473

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GL P+ F Y+  +    K      A KL ++++ KG  P++++YNV + GLCK G  
Sbjct: 474 LHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNL 533

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA    + +   G  P+ V+Y   + +    G   E  E+  +M    ++PT+VTY +L
Sbjct: 534 EEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVL 593

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I + A +G+ D A+    EM +    P+  +YN +I   C   K+D   K   +M  +  
Sbjct: 594 IHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGI 653

Query: 375 KPNEGTYNGLAML-CGVGKVQEAFAI-IQSLGNK 406
            PN+ TY  L    C +GK QEA  +  Q LG +
Sbjct: 654 FPNKYTYTILINENCNMGKWQEALRLYAQMLGKR 687



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 147/276 (53%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M+++G  PDVV  T L+   CK   M  A +  + M+  G+ PD  +YT  +    K 
Sbjct: 436 EDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKL 495

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G+   A +L E+M   G+P + +TYN  V GLC LGNL ++ + L ++I+ G VP+  TY
Sbjct: 496 GDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTY 555

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  + A  +   +    ++  D++++G  P +V+Y VL+      GR + A+ +F ++  
Sbjct: 556 TSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQE 615

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG  PNV++YN+L+   C   + ++A +   EM      P   TY ILI      GK   
Sbjct: 616 KGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQE 675

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           AL++  +M+  R RP + ++  ++ +L  + KV  V
Sbjct: 676 ALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAV 711



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 78  KLND---AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           KL D   AF   E M++KG  PDV+     +  LCK   +++A ++++ M+  G +PD  
Sbjct: 494 KLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHV 553

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  ++   + G++    ++   M   G     VTY  L+    + G L+ ++ +   +
Sbjct: 554 TYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEM 613

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG+VPN  TY+ L+    K R +  A K   ++  KG  PN  +Y +L+   C  G+ 
Sbjct: 614 QEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKW 673

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
           +EA+R +  +  K   P+  ++  LL+ L  + + +    + + +  GDR+
Sbjct: 674 QEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGDRT 724



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 65/115 (56%)

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
           YQ   +  +M +  F PD    + +++ L  + L+ +ALE++ +M EY  +P V  +N +
Sbjct: 184 YQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTM 243

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L   CK      +L++   M E+G  P+E T+ +L+ G++ + EL+ +  +++E+
Sbjct: 244 LHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM 298



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 1/134 (0%)

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A ++   M +YG  P   TY++++   C  G ++ AL++   M+E    P    FN L+
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            GL K      +  + Q M + G   +  TY  L+ G   +  L  +  + +E+  R V 
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339

Query: 550 SESAVERLVMQYDF 563
              A    +M Y F
Sbjct: 340 PTVASHNTIM-YGF 352


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 221/427 (51%), Gaps = 23/427 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MVSKG KPDV     L+  LCKA++++ AI VME M S G++PD  ++T L+    ++GN
Sbjct: 184 MVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGN 243

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A ++ E+M D G P   VT N LV G C  G + ++L F+D +              
Sbjct: 244 MDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEM-------------- 289

Query: 209 LLEAAYKERGVHA-AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
                    G H  A++L +++  KG +P+  +YN+L+  LC  G+ +EA+   R++   
Sbjct: 290 ------SNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEIS 343

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G   NV++YN L+   C   + EEA E+  +M+    S   VTYN LI  L    +   A
Sbjct: 344 GCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEA 403

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
            +++D+M+    +P   +YN ++   C EG +      +  M    C+P+  TY  L   
Sbjct: 404 AQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGG 463

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  G+V+ A  +++S+  K        Y  VI +L ++ +T +A +L  EM + G TPD
Sbjct: 464 LCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPD 523

Query: 447 SYTYSSLIRGLCMEG-LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           ++TY  + RGL   G  I EA++  + M E  + P+  +F  L  GLC     D  +++ 
Sbjct: 524 AFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLV 583

Query: 506 QMMIEKG 512
            +++EK 
Sbjct: 584 DLVMEKA 590



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 232/507 (45%), Gaps = 38/507 (7%)

Query: 46  ASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLL 105
           AS Q    P  S+Y +  RK G           L +          KG    + +   L+
Sbjct: 77  ASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEM---------KGLDCQIDRGVLLI 127

Query: 106 Y--DLCKANKMKKAIKVMEMM-VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           +     K    ++ + ++E+M V  G+  D   Y +L+N L     +     +   M   
Sbjct: 128 FIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSK 187

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   +  T+N L++ LC    +  ++  ++ +   GLVP+  T++ L++   +E  +  A
Sbjct: 188 GIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGA 247

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF----------------FRDLPS 266
            ++ + ++  G     V+ NVL+ G CKEGR EEA+ F                + ++ +
Sbjct: 248 FRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKN 307

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG +P+  +YN+L+ SLC  G+ +EA  LL EM+    +  ++TYN LI     + K + 
Sbjct: 308 KGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEE 367

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LA 385
           A ++ D+M       ++ +YN +I  LC   +V    + +DQM     KP++ TYN  L 
Sbjct: 368 AEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLT 427

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C  G +Q+A  I+Q++ +         Y  +I  LC+ G+   A +LL  +   G   
Sbjct: 428 YFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVL 487

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS-----RRTDL 500
             + Y+ +I+ L      +EA+ +F  MEE    PD   +  +  GL  S        D 
Sbjct: 488 TPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDF 547

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGI 527
            +E    MIEKG +P  +++ +L EG+
Sbjct: 548 VIE----MIEKGFLPEFSSFYMLAEGL 570



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 158/359 (44%), Gaps = 76/359 (21%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M +KG +PD      L+  LC   K+++A+ ++  M  SG   +  +Y  L++  CK   
Sbjct: 305 MKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKK 364

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A ++ ++ME  G   N+VTYN+L+ GLC    + ++ Q +D++I +GL P+ FTY+ 
Sbjct: 365 IEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNS 424

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR--------------- 253
           +L    +E  +  A  ++  + + G +P++V+Y  L+ GLCK GR               
Sbjct: 425 MLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKG 484

Query: 254 --------------------TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
                               T+EA+R FR++  KG  P+  +Y I+ R L   G      
Sbjct: 485 MVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSG------ 538

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
                                       G    A+  + EM++  F P  +S+  +   L
Sbjct: 539 ----------------------------GPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGL 570

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNS 409
           CS    D ++K +D +  +       + N + M+ G   + K Q+A A +  L + + S
Sbjct: 571 CSLSMEDTLIKLVDLVMEKA----NFSQNEVVMIRGFLKIRKFQDALATLGGLLDSRKS 625



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 182/387 (47%), Gaps = 31/387 (8%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLN------QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           +  N+  Y  ++R L  +G+ N      Q ++ LD  I +G++   F  S+     Y+E 
Sbjct: 83  FRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLL-IFIDSYAKFELYEE- 140

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            +   +++++  +  G   + + YN LL  L    + +        + SKG +P+V ++N
Sbjct: 141 -ILCIVEVME--VEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFN 197

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
           IL+++LC   +   A  ++ EM      P   T+  L+      G  D A +V ++M+  
Sbjct: 198 ILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDA 257

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAF 397
               +  + N ++   C EG+++  +  +D+M       NEG +              A 
Sbjct: 258 GCPVTNVTVNVLVHGFCKEGRIEEALSFIDEM------SNEGKHT------------MAI 299

Query: 398 AIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            +   + NK    P EF Y  +I SLC +GK  +A  LL EM   G   +  TY++LI G
Sbjct: 300 ELYNEMKNK-GCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDG 358

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            C    IEEA EIF  ME      +   +N L+ GLCKSRR   + ++   MI +G  P+
Sbjct: 359 FCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPD 418

Query: 517 ETTYTILVEGIAHQDELELSAEVLKEL 543
           + TY  ++     + +++ +A++++ +
Sbjct: 419 KFTYNSMLTYFCREGDIQKAADIVQTM 445



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 112/211 (53%), Gaps = 1/211 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +A    ++M  +G   + V    L+  LCK+ ++++A ++M+ M+  G+ PD  
Sbjct: 361 KNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKF 420

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++   C++G++  A  +V+ M   G   + VTY +L+ GLC  G +  + + L  +
Sbjct: 421 TYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSI 480

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR- 253
             KG+V     Y+ +++A +K +    AM+L  ++  KG  P+  +Y ++  GL   G  
Sbjct: 481 QLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGP 540

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
             EA+ F  ++  KGF P   S+ +L   LC
Sbjct: 541 IGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 215/431 (49%), Gaps = 1/431 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           +  +   ++  G  P A ++  L+  LC KG++  A+   +K+   G+  + V+Y +L+ 
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           GLC +G +  +LQ L R+  K + PNA  Y+ +++   K + V+ A  L   ++AK   P
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           ++ +YN L++G     +   AI  F  +  +   PNV ++NIL+   C EG+  +A  +L
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           A M   D  P +VTYN L+       K + A  + D M  G    +   Y  ++   C  
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
             VD  +   ++M  R+  PN  TY+ L   LC +G++  A  ++  + ++        Y
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTY 414

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             ++ +LC+     +A  LL  +   G  PD YTY+ LI+GLC  G +E+A  +F  +  
Sbjct: 415 SSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV 474

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
             Y  DV  +  ++ G C     D +L +   M + G +PN  TY +++  +  +DE + 
Sbjct: 475 KGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDT 534

Query: 536 SAEVLKELQLR 546
           + ++L+E+ +R
Sbjct: 535 AEKLLREMIVR 545



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 150/261 (57%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+NDA + L  M+    KPDVV   +L+   C  NK+ KA  + + M S G+I +  
Sbjct: 283 KEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQ 342

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT +VN  CK   V  A+ L E+M       N VTY+SL+ GLC LG +  +L+ +D +
Sbjct: 343 IYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEM 402

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G  PN  TYS +L+A  K   V  A+ LL ++  +G +P++ +Y +L+ GLC+ GR 
Sbjct: 403 HDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRL 462

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A   F DL  KG+  +V +Y ++++  C +G +++A  LL++M+     P   TY ++
Sbjct: 463 EDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELV 522

Query: 315 IGSLAYHGKTDHALKVLDEMV 335
           I SL    + D A K+L EM+
Sbjct: 523 ILSLFEKDENDTAEKLLREMI 543



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 149/303 (49%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +NDAF    +MV+K   PDV     L+      +K+  AI +   M    I P+  ++  
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV+  CK+G V  A  ++  M       + VTYNSL+ G C +  +N++    D +   G
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG 336

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++ N   Y+ ++    K + V  A+ L +++  +   PN+V+Y+ L+ GLCK GR   A+
Sbjct: 337 VIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYAL 396

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +   ++  +G  PN+V+Y+ +L +LC     ++A  LL  +      P + TY ILI  L
Sbjct: 397 KLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGL 456

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+ + A  V ++++   +     +Y  +I   C +G  D  +  L +M    C PN 
Sbjct: 457 CQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNA 516

Query: 379 GTY 381
            TY
Sbjct: 517 KTY 519



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 170/366 (46%), Gaps = 1/366 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  A   L+R+  K  +P+ V    ++ ++CKA  +  A  +   MV+  I PD  +Y 
Sbjct: 181 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYN 240

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++       + YA+ L  KM+      N  T+N LV G C  G +N +   L  +++ 
Sbjct: 241 ALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD 300

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+  TY+ L++       V+ A  + D + + G   N+  Y  ++ G CK    +EA
Sbjct: 301 DIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEA 360

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I  F ++  +   PNVV+Y+ L+  LC  GR   A +L+ EM    + P IVTY+ ++ +
Sbjct: 361 INLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDA 420

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +   D A+ +L  +     RP   +Y  +I  LC  G+++      + +  +    +
Sbjct: 421 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLD 480

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              Y  +    C  G   +A A++  + +       + Y+ VI SL  K +   A +LL 
Sbjct: 481 VYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLR 540

Query: 437 EMTKYG 442
           EM   G
Sbjct: 541 EMIVRG 546



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 65/130 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H ++ A   L  +  +G +PD+   T L+  LC++ +++ A  V E ++  G  
Sbjct: 419 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYN 478

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +YT ++   C KG    A+ L+ KMED G   N  TY  ++  L      + + + 
Sbjct: 479 LDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKL 538

Query: 191 LDRLIQKGLV 200
           L  +I +GL+
Sbjct: 539 LREMIVRGLL 548


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 245/497 (49%), Gaps = 7/497 (1%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK--MKKAIKVMEMMVSSGII 130
           +  D  +N+      RM+     P +V+   +L  + KAN      AI +   +   GI 
Sbjct: 32  KSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGIT 91

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   ++  LVNC C  G + +A  +  K+   GY   T+T+N+L+ G+C+ G L ++L F
Sbjct: 92  PTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHF 151

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I  G   +  +Y  L+    K     AA+++L  I  K    ++V YN+++  LCK
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCK 211

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +    +A + + ++ +K   P+VV++N L+   C+ G+ +EA  L  EM   + +P + T
Sbjct: 212 DKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYT 271

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           ++IL+ +L   G    A  +L  M+K    P   +Y+ ++   C   +V+        M 
Sbjct: 272 FSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
                P+  +YN   M+ G+GK++   EA ++ + +  K  +     Y  +I  LC+ G+
Sbjct: 332 RLGVAPHAHSYN--IMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGR 389

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A+QL+ EM   G   D  TY+SLI  LC    I++A+ +   +++   +P +  +N 
Sbjct: 390 ISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNI 449

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+ GLCK  R   + +VFQ ++ KG   N  TY I++ G+  +     +  +L +++   
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNG 509

Query: 548 VVSESAVERLVMQYDFE 564
           ++ ++     +++  F 
Sbjct: 510 IIPDAVTYETIIRALFR 526



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 146/265 (55%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +  A   L  M+ +G  PDVV  ++L+   C  N++ KA  V   M   G+ 
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVA 336

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P A SY  ++N L K   V  A+ L ++M   G   +TVTYNSL+ GLC LG ++ + Q 
Sbjct: 337 PHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQL 396

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +   G+  +  TY+ L++   K   +  A+ L+  I  +G +P++ +YN+L+ GLCK
Sbjct: 397 VDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCK 456

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR + A   F+DL  KG+  N  +YNI++  LC EG + EA  LL++M+     P  VT
Sbjct: 457 GGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVT 516

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           Y  +I +L    + + A K+L EM+
Sbjct: 517 YETIIRALFRKDENEKAEKLLREMI 541



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 157/333 (47%), Gaps = 35/333 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  ++DA+     M++K   PDVV   +L+   C   ++K+A  +   MV   I PD  
Sbjct: 211 KDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVY 270

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +++ LV+ LCK GN+  A  ++  M   G   + VTY+SL+ G C++  +N++      +
Sbjct: 271 TFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTM 330

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+ P+A +Y+ ++    K + V  A+ L  ++  KG  P+ V+YN L+ GLCK GR 
Sbjct: 331 SRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRI 390

Query: 255 -----------------------------------EEAIRFFRDLPSKGFEPNVVSYNIL 279
                                              ++AI   + +  +G +P++ +YNIL
Sbjct: 391 SYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNIL 450

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +  LC  GR + A ++  ++     S    TYNI+I  L   G  + A  +L +M     
Sbjct: 451 IDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGI 510

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            P A +Y  II  L  + + +   K L +M  R
Sbjct: 511 IPDAVTYETIIRALFRKDENEKAEKLLREMIIR 543



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 86/156 (55%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ A+  ++ M + G   D++   +L+  LCK + + KAI +++ +   GI P   +Y 
Sbjct: 389 RISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYN 448

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G +  A  + + +   GY  N  TYN ++ GLC  G  N++   L ++   
Sbjct: 449 ILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENN 508

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           G++P+A TY  ++ A +++     A KLL ++I +G
Sbjct: 509 GIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 69/130 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H ++ A   ++++  +G +P +     L+  LCK  ++K A  V + ++  G  
Sbjct: 417 DVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYS 476

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +A +Y  ++N LCK+G    A  L+ KME+ G   + VTY +++R L       ++ + 
Sbjct: 477 VNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKL 536

Query: 191 LDRLIQKGLV 200
           L  +I +GL+
Sbjct: 537 LREMIIRGLL 546


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 238/455 (52%), Gaps = 5/455 (1%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LC+  +  +A+ ++  M   G +PD   Y  +++ LC +G V  A  L+++M   G   +
Sbjct: 182 LCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSAD 241

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
             T+N +V GLC LG L ++ + +DR++ +G VPNA TY FLL+       V  A  +L 
Sbjct: 242 VNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLG 301

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            +     + N+V +N ++     +G+ +EA   +  + SKG  P+  +Y+IL+  LC  G
Sbjct: 302 RV----PELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLG 357

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           R   A +LL EM+    +P+IVTY IL+ S   +G  D+   +L+ M       +   YN
Sbjct: 358 RLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYN 417

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNK 406
            +I  +C + ++D  ++ + +M  +  KP+  TYN +   LC   +++EA  + ++L ++
Sbjct: 418 GMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHE 477

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
              +    Y  +I +L R G    A  L  +M  +G + D  +Y+ LI+ LC +G ++ +
Sbjct: 478 GVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRS 537

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           + +   M E   KP+  ++N L+  LCK+RR   +LE+ + M+ +   P+  TY  L+ G
Sbjct: 538 IMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLING 597

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +     +  +  +L++L    V ++     +++ +
Sbjct: 598 LCKMGWMHAALNLLEKLHNEDVHADIITYNILISW 632



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 220/449 (48%), Gaps = 7/449 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + ++A   L  M   G  PD V    +++ LC    + +A  +++ M   G   D +++ 
Sbjct: 187 RADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFN 246

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V+ LC  G +  A +LV++M   G   N +TY  L++GLC+   + ++   L R+ + 
Sbjct: 247 DIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPEL 306

Query: 198 GLVP-NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            +V  N      LL+   KE     A +L + + +KG  P+  +Y++L+ GLCK GR   
Sbjct: 307 NVVLFNTVIGRCLLDGKLKE-----AAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGS 361

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++  R++  KGF P++V+Y ILL S C  G W+    +L  M     S  +  YN +I 
Sbjct: 362 AMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMIC 421

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           ++    + D A++ + EM    ++P   +YN II  LC+  +++      + + H     
Sbjct: 422 AVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVA 481

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TYN L   L   G  Q+A ++   +     S     Y  +I +LCR G   ++  LL
Sbjct: 482 NAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLL 541

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM + G  P++ +Y+ LI  LC    + +ALE+   M   +  PD+  +N L+ GLCK 
Sbjct: 542 SEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKM 601

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILV 524
                +L + + +  +    +  TY IL+
Sbjct: 602 GWMHAALNLLEKLHNEDVHADIITYNILI 630



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 219/454 (48%), Gaps = 7/454 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N+A   L+ M   G   DV    ++++ LC   ++++A ++++ M+  G +P+A +Y +
Sbjct: 223 VNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGF 282

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML-GNLNQSLQFLDRLIQK 197
           L+  LC    V  A  ++ ++ +     N V +N+++ G C+L G L ++ +  + +  K
Sbjct: 283 LLKGLCLASQVEEARTMLGRVPEL----NVVLFNTVI-GRCLLDGKLKEAAELYETMGSK 337

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+A TYS L+    K   + +AMKLL ++  KG  P++V+Y +LL   C+ G  +  
Sbjct: 338 GCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNI 397

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  KG   N+  YN ++ ++C + R ++A   + EM      P I TYN +I  
Sbjct: 398 RAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYH 457

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  + + + A  + + ++      +A +YN +I  L   G     +   + M    C  +
Sbjct: 458 LCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLD 517

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             +YNGL   LC  G V  +  ++  +  K        Y  +I+ LC+  +   A +L  
Sbjct: 518 IVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSK 577

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM     TPD  TY++LI GLC  G +  AL +   +   D   D+  +N L+   CK+R
Sbjct: 578 EMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKAR 637

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
               +  +    +  G  PNE T+ I+V+    +
Sbjct: 638 LLHDASMLLNRAVTSGITPNERTWGIMVQNFVRK 671



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 187/416 (44%), Gaps = 40/416 (9%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P  T T++   R LC LG  +++L  L  + + G VP+   Y  ++ A   + GV+ A  
Sbjct: 169 PPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAAT 228

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           LLD++   G   ++ ++N ++ GLC  GR  EA R    +  +G  PN ++Y  LL+ LC
Sbjct: 229 LLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLC 288

Query: 285 -------------------------------MEGRWEEANELLAEMDGGDRSPTIVTYNI 313
                                          ++G+ +EA EL   M      P   TY+I
Sbjct: 289 LASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSI 348

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+   A+K+L EM    F PS  +Y  ++   C  G  D +   L+ M  + 
Sbjct: 349 LIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKG 408

Query: 374 CKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              N   YNG  M+C V K   + +A   +Q + ++        Y  +I  LC   +  +
Sbjct: 409 LSMNLEGYNG--MICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEE 466

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  L   +   G   ++ TY++LI  L   G  ++A+ +   M  +    D+ ++N L+ 
Sbjct: 467 AEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIK 526

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH----QDELELSAEVLKE 542
            LC+    D S+ +   M EKG  PN  +Y +L+  +      +D LELS E+L +
Sbjct: 527 ALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQ 582



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 154/305 (50%), Gaps = 2/305 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSY 136
           +L  A   L  M  KG  P +V  T LL+  C+ N M   I+ M E+M   G+  +   Y
Sbjct: 358 RLGSAMKLLREMEDKGFAPSIVTYTILLHSFCR-NGMWDNIRAMLEVMSDKGLSMNLEGY 416

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++  +CK   +  AM+ +++M+  GY  +  TYN+++  LC    + ++    + L+ 
Sbjct: 417 NGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLH 476

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+V NA TY+ L+ A  +      A+ L +D++  G   ++VSYN L+  LC++G  + 
Sbjct: 477 EGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDR 536

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           +I    ++  KG +PN VSYN+L+  LC   R  +A EL  EM   + +P IVTYN LI 
Sbjct: 537 SIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLIN 596

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G    AL +L+++          +YN +I+  C    +      L++       P
Sbjct: 597 GLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITP 656

Query: 377 NEGTY 381
           NE T+
Sbjct: 657 NERTW 661



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 172/380 (45%), Gaps = 34/380 (8%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D KL +A    E M SKG  PD    + L++ LCK  ++  A+K++  M   G  P   +
Sbjct: 321 DGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVT 380

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L++  C+ G       ++E M D G   N   YN ++  +C    ++ +++F+  + 
Sbjct: 381 YTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMK 440

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            +G  P+  TY+ ++        +  A  L ++++ +G   N ++YN L+  L + G  +
Sbjct: 441 SQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQ 500

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +AI    D+   G   ++VSYN L+++LC +G  + +  LL+EM      P  V+YN+LI
Sbjct: 501 DAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLI 560

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L    +   AL++  EM+     P   +YN +I                         
Sbjct: 561 SELCKTRRVRDALELSKEMLNQELTPDIVTYNTLI------------------------- 595

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
                 NGL   C +G +  A  +++ L N+   +    Y  +I+  C+    + A  LL
Sbjct: 596 ------NGL---CKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLL 646

Query: 436 YEMTKYGFTPDSYTYSSLIR 455
                 G TP+  T+  +++
Sbjct: 647 NRAVTSGITPNERTWGIMVQ 666



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 135/241 (56%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +++DA   ++ M S+G+KPD+     ++Y LC  N+M++A  + E ++  G++ +A 
Sbjct: 425 KDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAI 484

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L + G+   A+ L   M  +G   + V+YN L++ LC  GN+++S+  L  +
Sbjct: 485 TYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEM 544

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG+ PN  +Y+ L+    K R V  A++L  +++ +   P++V+YN L+ GLCK G  
Sbjct: 545 AEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWM 604

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+     L ++    ++++YNIL+   C      +A+ LL        +P   T+ I+
Sbjct: 605 HAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIM 664

Query: 315 I 315
           +
Sbjct: 665 V 665



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 91/177 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+    DA      MV  G   D+V    L+  LC+   + ++I ++  M   GI P+  
Sbjct: 495 RNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNV 554

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++ LCK   V  A++L ++M +     + VTYN+L+ GLC +G ++ +L  L++L
Sbjct: 555 SYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKL 614

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             + +  +  TY+ L+    K R +H A  LL+  +  G  PN  ++ +++    ++
Sbjct: 615 HNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRK 671



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 7/246 (2%)

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-RCKPN 377
           A +   + AL +L+ +   R  P   S    + R  + G+    +  LDQ+ HR    P+
Sbjct: 79  AANADPERALFLLESLPPSRVPPLRESLLIPLFRSLAPGRA---LHLLDQLPHRFAVSPS 135

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             +YN  LA         +  ++ + + ++    P  F +     +LCR G+  +A  +L
Sbjct: 136 FRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTML 195

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M ++G  PD+  Y ++I  LC +G + EA  +   M       DV+ FN ++ GLC  
Sbjct: 196 RSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTL 255

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL-QLRQVVSESAV 554
            R   +  +   M+ +G +PN  TY  L++G+    ++E +  +L  + +L  V+  + +
Sbjct: 256 GRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVI 315

Query: 555 ERLVMQ 560
            R ++ 
Sbjct: 316 GRCLLD 321


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 237/511 (46%), Gaps = 36/511 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+     PDV     +L  L   + M KA++V   M   GI P   +Y  L++  CK
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 246

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V   + L+ +M+  G   N VTYN L+ GL   G   Q+   +  +++ GL  +A+T
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+   + +  +  A+ L ++++ KG  P + +YN  + GLCK GR  +A++   D+ 
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +    P+VVSYN L+   C  G   +A  L  E+      PTIVTYN L+  L   G+ +
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK---------- 375
            A ++  EM+     P   +Y  ++   C  G + +  +  D+M H   +          
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486

Query: 376 -------------------------PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
                                    P+   YN +   LC +G ++EA  ++Q + +    
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVI 546

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  +I +    G+  +  ++ YEM   G TP   TY+ LI G   +G +E A   
Sbjct: 547 PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY 606

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M+E    P+V  +N+L+ GLCK RR D +   F  M+EKG  PN+ +YTIL+    +
Sbjct: 607 FSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCN 666

Query: 530 QDELELSAEVLKELQLRQVVSESAVERLVMQ 560
               + +  + K++  R V  +S     +++
Sbjct: 667 MGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 190/381 (49%), Gaps = 3/381 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A    E MV KG  P V    + +Y LCK  +M  A++ +  M+++ ++PD  SY  
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379

Query: 139 LVNCLCKKGNVGYAMQLVEKMED-YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           L+   C+ GN+  A  L +++   Y +PT  VTYN+L+ GLC  G L  + Q    +I +
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPT-IVTYNTLLDGLCRQGELEVAQQLKVEMINE 438

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+  TY+ L+  + K   +  A +  D+++ +G + +  +Y   + G  K G T  A
Sbjct: 439 GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 498

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ +KGF P+++ YN+++  LC  G  EEA+ELL +M      P  VTY  +I +
Sbjct: 499 FSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G+     ++  EM+     PS  +Y  +I     +G+++       +M  +   PN
Sbjct: 559 HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L   LC V ++ +A+     +  K     +  Y  +I   C  G   +A  L  
Sbjct: 619 VITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK 678

Query: 437 EMTKYGFTPDSYTYSSLIRGL 457
           +M   G  PDS T+S+L++ L
Sbjct: 679 QMLDRGVQPDSCTHSALLKQL 699



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 35/342 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA  QL  M++    PDVV    L+Y  C+   + KA  + + + S  + P   +Y 
Sbjct: 354 RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYN 413

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC++G +  A QL  +M + G   + VTY  LV G C +G+L+ + +F D ++ +
Sbjct: 414 TLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE 473

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +++ Y+  +    K      A  L ++++AKG  P+L+ YNV++ GLCK G  EEA
Sbjct: 474 GLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 533

Query: 258 IRF-----------------------------------FRDLPSKGFEPNVVSYNILLRS 282
                                                 F ++ SKG  P+VV+Y +L+  
Sbjct: 534 SELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
              +GR E A    +EM      P ++TYN LI  L    + D A     EMV+    P+
Sbjct: 594 HAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPN 653

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             SY  +I   C+ G     +    QM  R  +P+  T++ L
Sbjct: 654 KYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSAL 695



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 145/274 (52%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+++G  PD+V  T L+   CK   +  A +  + M+  G+  D+ +Y   +    K G+
Sbjct: 435 MINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGD 494

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A  L E+M   G+P + + YN +V GLC LGNL ++ + L +++  G++P+  TY+ 
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++ A  +   +    ++  ++++KG  P++V+Y VL+ G   +GR E A  +F ++  KG
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PNV++YN L+  LC   R ++A    AEM      P   +Y ILI      G    AL
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
            +  +M+    +P + +++ ++ +L  + K+  V
Sbjct: 675 SLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAV 708



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 156/341 (45%), Gaps = 6/341 (1%)

Query: 209 LLEAAYK--ERGVHAAMKLLDDIIAKGGKPNLVSYNVL---LTGLCKEGRTEEAIRFFRD 263
           L+ +AY   ER ++A M  + D++  G   + VS  +L   +    K+   E+ +  F  
Sbjct: 130 LMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDK 189

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +      P+V + N +LR L  +    +A E+   M      PTIVTYN L+ S    GK
Sbjct: 190 MIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGK 249

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
               L +L EM +    P+  +YN +I  L  +G+ +     + +M     K +  TYN 
Sbjct: 250 VQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L       G + EA ++ + +  K  S     Y   I  LC+ G+   A Q L +M    
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD  +Y++LI G C  G + +A  +F  +      P +  +N LL GLC+    +++ 
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQ 429

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           ++   MI +G  P+  TYTILV G      L ++ E   E+
Sbjct: 430 QLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 239/462 (51%), Gaps = 6/462 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E M   G  PDV     L+    K+   ++    ++ M+ +G+ P+A  Y  L++CLCK
Sbjct: 17  VEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCK 76

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A   +++M  +  P N V+YN ++ G C   N+ ++L FL  + + G  P    
Sbjct: 77  AGMLAEAESYLKRMPQHCAP-NVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHA 135

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS ++++  K   V  AM +  ++ AKG +P++V++NVLL+GL +  +  EA   FR + 
Sbjct: 136 YSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMN 195

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S+G +P+VV+YN ++  LC   + +EA  LL  M   D SPT VTY  LI  L    +  
Sbjct: 196 SRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQ 255

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIA--RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            A +V ++M +G    +  +Y+ +I    LC   +     +   +M  R   P   TYN 
Sbjct: 256 QAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 315

Query: 384 -LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L  L    K+Q+A  +   + + Q  +P  F Y+ +I+SLC+  +  +AF+LL  M   
Sbjct: 316 LLEGLLSTAKLQDAMELTYFMLD-QVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDK 374

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           GF P    +  L+  L   G +++A E++  M   + +  V + N LL G+ +    D +
Sbjct: 375 GFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEA 434

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +  + M + G +P++ TY  LV G+  Q + + + ++++EL
Sbjct: 435 KDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 178/399 (44%), Gaps = 38/399 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   +  A   L  M   GH P     ++++   CK   + KA+ V   M + G  
Sbjct: 106 DGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCE 165

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  L++ L +   +  A +L   M   G   + VTYN+++ GLC    L++++  
Sbjct: 166 PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFL 225

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP---NLVSYNVLLTG 247
           L+R+ Q+ + P   TY+ L++   K   +  A ++ +  +A+G  P      S  +L+ G
Sbjct: 226 LERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEK-MAEGPCPCTEPAYSVLILING 284

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           LCK  R  EA   F+++  +G  P VV+YN LL  L    + ++A EL   M     +P 
Sbjct: 285 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPN 344

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + TY ILI SL    + + A K+L  M    F PS   +  +++RL   G++D   +   
Sbjct: 345 MFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYK 404

Query: 368 QMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           +M    C+   G+ N L                                  +  + R+G 
Sbjct: 405 EMSRINCQQLVGSSNIL----------------------------------LDGILRRGS 430

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
             +A   L +MT  G  PD +TY  L+ GLC +G  ++A
Sbjct: 431 VDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQA 469



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 147/297 (49%), Gaps = 2/297 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+++A      M S+G KPDVV    ++  LCK  K+ +A+ ++E M    + P   
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS--LVRGLCMLGNLNQSLQFLD 192
           +YT L++ LCK   +  A ++ EKM +   P     Y+   L+ GLC      ++ +   
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +  +G+ P   TY+ LLE       +  AM+L   ++ +   PN+ +Y +L++ LCK  
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTD 359

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + EEA +    +  KGF P++  + +LL  L   GR ++A EL  EM   +    + + N
Sbjct: 360 QVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSN 419

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           IL+  +   G  D A   L +M      P   +Y+ ++  LC +GK D   K ++++
Sbjct: 420 ILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 173/373 (46%), Gaps = 4/373 (1%)

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +R L     + Q+   ++ +   G  P+  ++  L+   +K          LD ++  G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            PN + YN L++ LCK G   EA  + + +P +   PNVVSYNI++   C     E+A  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
            L EM+     PT   Y+ ++ S    G    A+ V  EM      P   ++N +++ L 
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
              K+    +    M  R CKP+  TYN + A LC   K+ EA  +++ +  +  S    
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTK--YGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
            Y  +I  LC+  +  QA+++  +M +     T  +Y+   LI GLC      EA E+F 
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M      P V  +N LL GL  + +   ++E+   M+++   PN  TY IL+  +   D
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTD 359

Query: 532 ELELSAEVLKELQ 544
           ++E + ++L  ++
Sbjct: 360 QVEEAFKLLSAMR 372



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP---DAS 134
           KL++A   LERM  +   P  V  T L+  LCK  ++++A +V E M + G  P    A 
Sbjct: 218 KLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKM-AEGPCPCTEPAY 276

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S   L+N LCK    G A ++ ++M   G     VTYN+L+ GL     L  +++    +
Sbjct: 277 SVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 336

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +   PN FTY  L+ +  K   V  A KLL  +  KG  P+L  + VLL+ L + GR 
Sbjct: 337 LDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRL 396

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A   ++++     +  V S NILL  +   G  +EA + L +M      P   TY+ L
Sbjct: 397 DDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 456

Query: 315 IGSLAYHGKTDHALKVLDEMVK 336
           +  L + GK D A K+++E+V+
Sbjct: 457 VVGLCWQGKADQARKLVEELVR 478



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 4/225 (1%)

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A  +++EM    F P   S+  +I      G        LD+M      PN   YN L 
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           + LC  G + EA + ++ +   Q+ +P    Y  +I   C+     +A   L EM + G 
Sbjct: 72  SCLCKAGMLAEAESYLKRM--PQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGH 129

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P  + YSS+++  C  G + +A+++F  M     +PD+ NFN LL GL ++R+   + E
Sbjct: 130 PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARE 189

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +F+ M  +G  P+  TY  ++ G+    +L+ +  +L+ ++   V
Sbjct: 190 LFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDV 234



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 78/156 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL DA      M+ +   P++     L+  LCK +++++A K++  M   G +P    + 
Sbjct: 325 KLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWE 384

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L + G +  A +L ++M          + N L+ G+   G+++++  FL ++   
Sbjct: 385 VLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDT 444

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           G+VP+ FTY  L+     +     A KL+++++  G
Sbjct: 445 GIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 261/552 (47%), Gaps = 22/552 (3%)

Query: 4   LLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPN 63
           +L     L  PS E    + G Y Q+   H             +TQ+    K   Y +PN
Sbjct: 128 ILHPTRDLPEPSKELLDTSIGAYVQMDQPH------------LATQIFNKMKRLNY-RPN 174

Query: 64  RKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATN----LLYDLCKANKMKKAIK 119
               N        +  + + L   +++    K  VV  TN    L+Y  C  +K+K A+ 
Sbjct: 175 LLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALD 234

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
            +  M   G +PD  SY  +++ L K+  +  A  L+  M+  G   N  TYN LV G C
Sbjct: 235 WVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYC 294

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
            LG L ++ + ++ + +  L+P  +TY+ L+     +  +  A ++ D++      P++V
Sbjct: 295 RLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVV 354

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +YN L+ G  +   + E      ++  KG + N V+YNI+L+ +C +G   EA   L +M
Sbjct: 355 TYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKM 414

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           +    SP  VTYN LIG+    GK   A +++DEM     +    + N I+  LC E K+
Sbjct: 415 EENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKL 474

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYK 416
           D     L     R    +E +Y G+ +L G  K ++   A  +   +  +Q       Y 
Sbjct: 475 DEAYNLLCSASKRGYILDEVSY-GILIL-GYFKDEKGDRALNLWDEMKERQIMPSTITYN 532

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            VI  LC+  K  QA   L EM + G  PD  TY+ +I G C+EG +E+A +    M E 
Sbjct: 533 SVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIEN 592

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
            +KPDV   N LL GLC+    + +L++F  ++ KG+  +  TY  ++  +  + + E +
Sbjct: 593 LFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENA 652

Query: 537 AEVLKELQLRQV 548
            ++L E++ +++
Sbjct: 653 YDLLTEMEAKKL 664



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 214/450 (47%), Gaps = 34/450 (7%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M SKG  P+      L+   C+   +K+A KV+E+M  + ++P   +Y  LVN  C  G 
Sbjct: 274 MKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGK 333

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A ++ ++ME      + VTYN+L+ G     + ++    ++ + +KG+  NA TY+ 
Sbjct: 334 IDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNI 393

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L+   K+  +  A   LD +   G  P+ V+YN L+   CK G+  +A R   ++ SKG
Sbjct: 394 ILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKG 453

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + +  + N +L  LC+E + +EA  LL            V+Y ILI       K D AL
Sbjct: 454 LKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRAL 513

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            + DEM + +  PS  +YN +I  LC   KVD  +  L++M      P+E TYN      
Sbjct: 514 NLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYN------ 567

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                                        +I   C +G   +AFQ   EM +  F PD Y
Sbjct: 568 ----------------------------IIIHGFCLEGNVEKAFQFHNEMIENLFKPDVY 599

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           T + L+RGLC EG++E+AL++F  +       DV  +N ++  LCK  + + + ++   M
Sbjct: 600 TCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEM 659

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAE 538
             K   P++ TY +++  +     ++ + E
Sbjct: 660 EAKKLGPDQYTYKVIIAALTDAGRIKEAEE 689



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 192/396 (48%), Gaps = 24/396 (6%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E M  KG K + V    +L  +CK   M +A   ++ M  +G+ PD  +Y  L+   CK
Sbjct: 376 IEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCK 435

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +G A +++++M   G   +T T N+++  LC+   L+++   L    ++G + +  +
Sbjct: 436 AGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVS 495

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+   +K+     A+ L D++  +   P+ ++YN ++ GLC+  + ++AI    ++ 
Sbjct: 496 YGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEML 555

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+  +YNI++   C+EG  E+A +   EM      P + T NIL+  L   G  +
Sbjct: 556 ENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLE 615

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            ALK+ + +V         +YN II+ LC EGK +     L +M  ++  P++ TY   +
Sbjct: 616 KALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVII 675

Query: 385 AMLCGVGKVQEA----FAIIQS---------LGNKQNSSPQEF----------YKYVITS 421
           A L   G+++EA      +++S         LG  QN    E           Y   I  
Sbjct: 676 AALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINE 735

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           LC + K   A  L  E+TK G   + YTY +L+ GL
Sbjct: 736 LCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGL 771



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 209/447 (46%), Gaps = 24/447 (5%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K+++AF   + M      PDVV    L+    +     +   ++E M   G+  +A +
Sbjct: 331 DGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVT 390

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  ++  +CKKGN+  A   ++KME+ G   + VTYN+L+   C  G + ++ + +D + 
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMT 450

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            KGL  + +T + +L     E+ +  A  LL     +G   + VSY +L+ G  K+ + +
Sbjct: 451 SKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGD 510

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+  + ++  +   P+ ++YN ++  LC   + ++A + L EM      P   TYNI+I
Sbjct: 511 RALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIII 570

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  + A +  +EM++  F+P   + N ++  LC EG ++  +K  + +  +   
Sbjct: 571 HGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKD 630

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            +  TYN + + LC  GK + A+ ++  +  K+    Q  YK +I +L   G+  +A + 
Sbjct: 631 IDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEF 690

Query: 435 LYEMTKYGFTPD-----------------------SYTYSSLIRGLCMEGLIEEALEIFV 471
             +M + G   D                       S  YS  I  LC +   ++A+ +FV
Sbjct: 691 TLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFV 750

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRT 498
            + +     +   +  L+ GL K R++
Sbjct: 751 EVTKEGVALNKYTYLNLMEGLIKRRKS 777



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 23/248 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K + A    + M  +   P  +   +++  LC++ K+ +AI  +  M+ +G++PD +
Sbjct: 505 KDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDET 564

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  C +GNV  A Q   +M +  +  +  T N L+RGLC  G L ++L+  + L
Sbjct: 565 TYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTL 624

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG   +  TY+ ++ +  KE     A  LL ++ AK   P+  +Y V++  L   GR 
Sbjct: 625 VSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRI 684

Query: 255 EEAIRFFRDLPSKG-----------------------FEPNVVSYNILLRSLCMEGRWEE 291
           +EA  F   +   G                       F+   ++Y+  +  LC + ++++
Sbjct: 685 KEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKD 744

Query: 292 ANELLAEM 299
           A  L  E+
Sbjct: 745 AMHLFVEV 752



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 119/273 (43%), Gaps = 37/273 (13%)

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL---KVLDEMVKGRFRPSAASYNP 348
           A ++  +M   +  P ++T N L+ SL  +  +   L   +VL + +K    P+  S+N 
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN 408
           +I   C E KV   +  +++M    C P+  +YN                          
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNT------------------------- 253

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                    ++ +L ++    +A  LL +M   G +P+ +TY+ L+ G C  GL++EA +
Sbjct: 254 ---------ILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATK 304

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +  +M   +  P V  +N L+ G C   + D +  +   M +   +P+  TY  L++G +
Sbjct: 305 VIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCS 364

Query: 529 HQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
              +      +++E+  + V   +    +++++
Sbjct: 365 QWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKW 397


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 222/452 (49%), Gaps = 37/452 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L+ A+    R    G K  +     LL  L K NK+     V + M+   I  + +
Sbjct: 142 KNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLN 201

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM---LGNLNQSLQFL 191
           ++   +N LC+ G +  A   +E M+ +G   N VTYN+LV G C     G + ++  F+
Sbjct: 202 TFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFM 261

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++   + PN  T++ L++   K+  V AA K  +++  +G KPN+V+YN L+ GLC  
Sbjct: 262 KEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNN 321

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ EEAI  +  +   G +PN+V+YN L+   C +   +EA ++  ++   +  P ++T+
Sbjct: 322 GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITF 381

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N +I +    G  +    +   M+     P+ ++YN +IA LC +  +    + L++M +
Sbjct: 382 NTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMEN 441

Query: 372 RRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           +  K +  TYN L                                  I  LC+  K+  A
Sbjct: 442 KGLKGDVVTYNIL----------------------------------IDGLCKNDKSRNA 467

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL EM   G  P+  TY++L+ G CMEG ++ AL +   ME+   +P+V  +N L+ G
Sbjct: 468 EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            CK  + + +  +   M+EKG  PN TTY I+
Sbjct: 528 YCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 192/376 (51%), Gaps = 20/376 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCK---ANKMKKAIKVMEMMVSSGIIP 131
           R  KLN A   +E M + G  P+VV    L+   CK   A KM KA   M+ M+++ I P
Sbjct: 212 RAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICP 271

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  ++  L++  CK  NV  A +  E+M+  G   N VTYNSL+ GLC  G L +++   
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLW 331

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           D+++  GL PN  TY+ L+    K++ +  A K+ DD+  +   PN++++N ++   CKE
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKE 391

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  EE       +  +G  PNV +YN L+  LC +   + A ELL EM+       +VTY
Sbjct: 392 GMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTY 451

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI  L  + K+ +A K+L+EM     +P+  +YN ++   C EGK+   +    +M  
Sbjct: 452 NILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEK 511

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            R +PN  TYN L    C + K++ A  ++  +  K               L     TY 
Sbjct: 512 ERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEK--------------GLNPNRTTYD 557

Query: 431 AFQLLYEMTKYGFTPD 446
             +L  EM + GF+PD
Sbjct: 558 IVRL--EMLEKGFSPD 571



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 185/396 (46%), Gaps = 4/396 (1%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A +   + +DYG+  +  + N L+  L     +         +I++ +  N  T++  + 
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG---RTEEAIRFFRDLPSKG 268
              +   ++ A   ++D+ A G  PN+V+YN L+ G CK G   +  +A  F +++ +  
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN V++N L+   C +     A +   EM      P IVTYN LI  L  +GK + A+
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            + D+MV    +P+  +YN +I   C +  +    K  D +  +   PN  T+N +    
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G ++E F++  S+ ++        Y  +I  LCRK     A +LL EM   G   D 
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ LI GLC       A ++   M     KP+   +N L+ G C   +   +L V   
Sbjct: 449 VTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTR 508

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M ++ + PN  TY +L++G    ++LE +  +L E+
Sbjct: 509 MEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEM 544



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 153/345 (44%), Gaps = 37/345 (10%)

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           A     L+ A  K   +H A +        G K +L S N LL+ L KE +  +    ++
Sbjct: 130 ALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYK 189

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++  +    N+ ++NI +  LC  G+  +A + + +M     SP +VTYN L+      G
Sbjct: 190 EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG 249

Query: 323 KTDHALKV---LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                 K    + EM+  +  P+  ++N +I   C +  V    K  ++M  +  KPN  
Sbjct: 250 SAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIV 309

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           TYN L                                  I  LC  GK  +A  L  +M 
Sbjct: 310 TYNSL----------------------------------INGLCNNGKLEEAIDLWDKMV 335

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  P+  TY++LI G C + +++EA ++F  + + +  P+V  FN ++   CK    +
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               +   M+++G +PN +TY  L+ G+  + +L+ + E+L E++
Sbjct: 396 EGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 123/255 (48%), Gaps = 4/255 (1%)

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           +DGG    T +  ++L+ +   + +   A +         F+ S  S NP+++ L  E K
Sbjct: 121 LDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENK 180

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +  V     +M  RR   N  T+N  +  LC  GK+ +A   I+ +     S     Y  
Sbjct: 181 IGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNT 240

Query: 418 VITSLCRKG---KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           ++   C++G   K Y+A   + EM      P+  T+++LI G C +  +  A + F  M+
Sbjct: 241 LVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQ 300

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +   KP++  +N+L+ GLC + + + +++++  M+  G  PN  TY  L+ G   +  ++
Sbjct: 301 KQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMK 360

Query: 535 LSAEVLKELQLRQVV 549
            + +V  ++  +++V
Sbjct: 361 EATKVFDDVSKQELV 375



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 18/210 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  + + F     M+ +G  P+V     L+  LC+   ++ A +++  M + G+ 
Sbjct: 386 DAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLK 445

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L++ LCK      A +L+ +M + G   N VTYN+L+ G CM G L  +L  
Sbjct: 446 GDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV 505

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ ++   PN  TY+ L++   K   + AA  LL++++ KG  PN  +Y++       
Sbjct: 506 RTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI------- 558

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVS--YNI 278
                  +R   ++  KGF P++    YNI
Sbjct: 559 -------VRL--EMLEKGFSPDIEGHLYNI 579


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 237/511 (46%), Gaps = 36/511 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+     PDV     +L  L   + M KA++V   M   GI P   +Y  L++  CK
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 246

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V   + L+ +M+  G   N VTYN L+ GL   G   Q+   +  +++ GL  +A+T
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+   + +  +  A+ L ++++ KG  P + +YN  + GLCK GR  +A++   D+ 
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +    P+VVSYN L+   C  G   +A  L  E+      PTIVTYN L+  L   G+ +
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 426

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK---------- 375
            A ++  EM+     P   +Y  ++   C  G + +  +  D+M H   +          
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486

Query: 376 -------------------------PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
                                    P+   YN +   LC +G ++EA  ++Q + +    
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVI 546

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  +I +    G+  +  ++ YEM   G TP   TY+ LI G   +G +E A   
Sbjct: 547 PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY 606

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M+E    P+V  +N+L+ GLCK RR D +   F  M+EKG  PN+ +YTIL+    +
Sbjct: 607 FSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCN 666

Query: 530 QDELELSAEVLKELQLRQVVSESAVERLVMQ 560
               + +  + K++  R V  +S     +++
Sbjct: 667 MGNWQEALSLYKQMLDRGVQPDSCTHSALLK 697



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 190/381 (49%), Gaps = 3/381 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A    E MV KG  P V    + +Y LCK  +M  A++ +  M+++ ++PD  SY  
Sbjct: 320 LAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNT 379

Query: 139 LVNCLCKKGNVGYAMQLVEKMED-YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           L+   C+ GN+  A  L +++   Y +PT  VTYN+L+ GLC  G L  + Q    +I +
Sbjct: 380 LIYGYCRLGNLMKAFLLFDELRSIYLFPT-IVTYNTLLDGLCRQGELEVAQQLKVEMINE 438

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+  TY+ L+  + K   +  A +  D+++ +G + +  +Y   + G  K G T  A
Sbjct: 439 GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 498

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ +KGF P+++ YN+++  LC  G  EEA+ELL +M      P  VTY  +I +
Sbjct: 499 FSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G+     ++  EM+     PS  +Y  +I     +G+++       +M  +   PN
Sbjct: 559 HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L   LC V ++ +A+     +  K     +  Y  +I   C  G   +A  L  
Sbjct: 619 VITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK 678

Query: 437 EMTKYGFTPDSYTYSSLIRGL 457
           +M   G  PDS T+S+L++ L
Sbjct: 679 QMLDRGVQPDSCTHSALLKQL 699



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 35/342 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA  QL  M++    PDVV    L+Y  C+   + KA  + + + S  + P   +Y 
Sbjct: 354 RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYN 413

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC++G +  A QL  +M + G   + VTY  LV G C +G+L+ + +F D ++ +
Sbjct: 414 TLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE 473

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +++ Y+  +    K      A  L ++++AKG  P+L+ YNV++ GLCK G  EEA
Sbjct: 474 GLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 533

Query: 258 IRF-----------------------------------FRDLPSKGFEPNVVSYNILLRS 282
                                                 F ++ SKG  P+VV+Y +L+  
Sbjct: 534 SELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
              +GR E A    +EM      P ++TYN LI  L    + D A     EMV+    P+
Sbjct: 594 HAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPN 653

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             SY  +I   C+ G     +    QM  R  +P+  T++ L
Sbjct: 654 KYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSAL 695



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 145/274 (52%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+++G  PD+V  T L+   CK   +  A +  + M+  G+  D+ +Y   +    K G+
Sbjct: 435 MINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGD 494

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A  L E+M   G+P + + YN +V GLC LGNL ++ + L +++  G++P+  TY+ 
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++ A  +   +    ++  ++++KG  P++V+Y VL+ G   +GR E A  +F ++  KG
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PNV++YN L+  LC   R ++A    AEM      P   +Y ILI      G    AL
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
            +  +M+    +P + +++ ++ +L  + K+  V
Sbjct: 675 SLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAV 708



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 156/341 (45%), Gaps = 6/341 (1%)

Query: 209 LLEAAY--KERGVHAAMKLLDDIIAKGGKPNLVSYNVL---LTGLCKEGRTEEAIRFFRD 263
           L+ +AY   ER ++A M  + D++  G   + VS  +L   +    K+   E+ +  F  
Sbjct: 130 LMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDK 189

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +      P+V + N +LR L  +    +A E+   M      PTIVTYN L+ S    GK
Sbjct: 190 MIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGK 249

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
               L +L EM +    P+  +YN +I  L  +G+ +     + +M     K +  TYN 
Sbjct: 250 VQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L       G + EA ++ + +  K  S     Y   I  LC+ G+   A Q L +M    
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD  +Y++LI G C  G + +A  +F  +      P +  +N LL GLC+    +++ 
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQ 429

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           ++   MI +G  P+  TYTILV G      L ++ E   E+
Sbjct: 430 QLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 120/226 (53%), Gaps = 3/226 (1%)

Query: 78  KLND---AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           KL D   AF   E M++KG  PD++    ++  LCK   +++A ++++ MVS G+IPD  
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT +++   + G +    ++  +M   G   + VTY  L+ G    G L ++  +   +
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM 610

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG++PN  TY+ L+    K R +  A     +++ KG  PN  SY +L+   C  G  
Sbjct: 611 QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW 670

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           +EA+  ++ +  +G +P+  +++ LL+ L  + + +   +L + +D
Sbjct: 671 QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLD 716


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 223/456 (48%), Gaps = 8/456 (1%)

Query: 84  LQLERMVSKGH----KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           L+L RM++  H     P+VV  T ++  LCKA    +A  V + M+ +G+ P+  +Y  L
Sbjct: 189 LELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCL 248

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++     G     +Q++EKM   G   +  TY SL+  LC L  ++    FLD +++ GL
Sbjct: 249 IHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHS---FLDLMVENGL 305

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+   ++    A  K   +  AM + + +   G  PN+V+Y  L+  LCK GR ++A  
Sbjct: 306 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV 365

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F  + ++G  PN+V +N L+  LC   +WE A EL+ EM      P  V +N LI +L 
Sbjct: 366 KFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 425

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G+     +++D M     RP A SY P+I+  C  G+ D   K  D M      P E 
Sbjct: 426 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEV 485

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TYN L    C   ++ +A+ + + +  K  +     Y  ++  L +  +  +A +L   M
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G   D YTY+ ++ GLC    ++EA ++F  +     + ++  F  ++  L K  R 
Sbjct: 546 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 605

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           + ++++F  +   G +PN  TY ++ E +  +  LE
Sbjct: 606 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLE 641



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 211/450 (46%), Gaps = 8/450 (1%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F ++ R  S    P+    + L+  LC+  ++K +     +++ +G   +      L+  
Sbjct: 83  FNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKG 142

Query: 143 LCKKGNVGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ---KG 198
           LC    VG AM  L+++M + G   +TV+Y+ L++G C      ++L+ L  +     + 
Sbjct: 143 LCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRS 202

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN  TY+ +++   K +    A  +   +I  G KPN  +YN L+ G    G+ +E +
Sbjct: 203 CPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVV 262

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +    + ++G +P+  +Y  LL  LC      E +  L  M     SP    +NI   + 
Sbjct: 263 QMLEKMSARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAY 319

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
           A  G  D A+ + ++M +    P+  +Y  +I  LC  G+VD      +QM +    PN 
Sbjct: 320 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 379

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             +N L   LC V K + A  ++  + ++       F+  +I +LC  G+  +  +L+  
Sbjct: 380 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 439

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD+++Y+ LI G C+ G  +EA ++F  M      P    +N LL G C + R
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            D +  +F+ M+ KG  P   TY  ++ G+
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGL 529



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 203/431 (47%), Gaps = 9/431 (2%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + P+  +Y+ L+ CLC+ G + ++      +   G+  N +  N L++GLC    + +++
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 189 Q-FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK---PNLVSYNVL 244
              L R+ + G  P+  +YS LL+    E     A++LL  +    G+   PN+V+Y  +
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + GLCK    + A   F+ +   G +PN  +YN L+      G+W+E  ++L +M     
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P   TY  L+  L    +  H+   LD MV+    P    +N   +     G +D  + 
Sbjct: 274 KPDCYTYGSLLNYLCALSEM-HSF--LDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 330

Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
             ++M      PN   Y  L   LC +G+V +A      + N+  +     +  ++  LC
Sbjct: 331 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 390

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
              K  +A +L+YEM   G  P++  +++LI  LC  G + E   +  +ME    +PD  
Sbjct: 391 TVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAF 450

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           ++  L+ G C + RTD + +VF  M+  G  P E TY  L+ G      ++ +  + +E+
Sbjct: 451 SYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 510

Query: 544 QLRQVVSESAV 554
            LR+ V+   V
Sbjct: 511 -LRKGVTPGVV 520



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 210/467 (44%), Gaps = 7/467 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  +    LE+M ++G KPD     +LL  LC  ++M      +++MV +G+ PD   + 
Sbjct: 257 KWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMH---SFLDLMVENGLSPDHHIFN 313

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
              +   K G +  AM +  KM  +G   N V Y +L+  LC LG ++ +    +++I +
Sbjct: 314 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 373

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN   ++ L+           A +L+ +++ +G  PN V +N L+  LC  GR  E 
Sbjct: 374 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEG 433

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R    +   G  P+  SY  L+   C+ GR +EA ++   M     SPT VTYN L+  
Sbjct: 434 RRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 493

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                + D A  +  EM++    P   +YN I+  L    +     +    M +   K +
Sbjct: 494 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 553

Query: 378 EGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN  L  LC    V EAF + QSL +K        +  +I +L + G+   A  L  
Sbjct: 554 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 613

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            +   G  P+  TY  +   L  EG +EE   +F  ME+    P+    NAL+  L    
Sbjct: 614 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL--H 671

Query: 497 RTDLSLE-VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           R D+S    +   +++     E + T L+  I   DE +  A+ L E
Sbjct: 672 RGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSLPE 718


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 244/527 (46%), Gaps = 54/527 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K++DA   L+ M+  G K ++    +L+   CK  ++ +A  V+  MV   + 
Sbjct: 340 DGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLK 399

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD+ SY  L++  C++G+   A  L +KM   G     +TYN+L++GLC +G  + +LQ 
Sbjct: 400 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +++ G+ P+   YS LL+  +K      A  L  DI+A+G   + +++N +++GLCK
Sbjct: 460 WHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA   F  +   G  P+ ++Y  L+   C      +A ++   M+    SP+I  
Sbjct: 520 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEM 579

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  L    +      +L EM      P+  +Y  +I   C EG +D   K     F
Sbjct: 580 YNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD---KAFSSYF 636

Query: 371 HRRCKPNEGTYNGLA---MLCG--------VGKVQEA----------------------- 396
                  E T NGL+   ++C         +G++ EA                       
Sbjct: 637 -------EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 397 --FAIIQSLGNKQNSSPQEF-------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
             +A IQ + +  + S + F       Y   I  LC+ GK   A +    ++  GF PD+
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           +TY +LI G    G ++EA  +   M      P++  +NAL+ GLCKS   D +  +F  
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           + +KG  PN  TY  L++G      ++ +A  LK+  + + +S S V
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMD-AAFKLKDKMIEEGISPSVV 855



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 221/458 (48%), Gaps = 6/458 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A    + M   G  P +    +LL +L K  +   A  V + M+  GI+PD    + +V
Sbjct: 174 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 233

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N  CK G V  A   V+KME+ G   N VTY+SL+ G   LG++  +   L  + +KG+ 
Sbjct: 234 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 293

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIR 259
            N  TY+ L++   K+  +  A K+L  +  +    P+  +Y VL+ G C+ G+ ++A+R
Sbjct: 294 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 353

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              ++   G + N+   N L+   C  G   EA  ++  M   +  P   +YN L+    
Sbjct: 354 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 413

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G T  A  + D+M++    P+  +YN ++  LC  G  D  ++    M      P+E 
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEV 473

Query: 380 TYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            Y+ L  L G+ K++    A  + + +  +  +  +  +  +I+ LC+ GK  +A ++  
Sbjct: 474 GYSTL--LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M   G +PD  TY +LI G C    + +A ++   ME     P ++ +N+L+ GL KSR
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSR 591

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           R     ++   M  +G  PN  TY  L++G   +  L+
Sbjct: 592 RLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 219/448 (48%), Gaps = 2/448 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+++A   +++M + G +P++V   +L+        ++ A  V++ M   G+  +  
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +YT L+   CK+  +  A +++  M E+     +   Y  L+ G C  G ++ +++ LD 
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ GL  N F  + L+    K   +H A  ++  ++    KP+  SYN LL G C+EG 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T EA      +  +G EP V++YN LL+ LC  G +++A ++   M     +P  V Y+ 
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYST 477

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L      + A  +  +++   F  S  ++N +I+ LC  GK+    +  D+M    
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+  TY  L    C    V +AF +  ++  +  S   E Y  +I+ L +  +  +  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXT 597

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            LL EM   G TP+  TY +LI G C EG++++A   +  M E     ++   + ++ GL
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            +  R D +  + Q M++ G  P+   +
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECF 685



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 216/489 (44%), Gaps = 33/489 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+   ++AF   ++M+ +G +P V+    LL  LC+      A+++  +M+  G+ 
Sbjct: 410 DGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVA 469

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   Y+ L++ L K  N   A  L + +   G+  + +T+N+++ GLC +G + ++ + 
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D++   G  P+  TY  L++   K   V  A K+   +  +   P++  YN L++GL K
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFK 589

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R  E      ++  +G  PN+V+Y  L+   C EG  ++A     EM     S  I+ 
Sbjct: 590 SRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 649

Query: 311 YNILIGSLAYHGKTDHA--------------------------------LKVLDEMVKGR 338
            + ++  L   G+ D A                                   LDE  K  
Sbjct: 650 CSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF 709

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
             P+   YN  IA LC  GKVD   +    +  +   P+  TY  L       G V EAF
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +   +  +        Y  +I  LC+     +A +L +++ + G  P+  TY++LI G 
Sbjct: 770 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 829

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G ++ A ++   M E    P V  ++AL+ GLCK    + S+++   MI+ G     
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKL 889

Query: 518 TTYTILVEG 526
             Y  LV+G
Sbjct: 890 IEYCTLVQG 898



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 210/438 (47%), Gaps = 12/438 (2%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK---KGNVGYAMQLVEKMEDYGY-PTNTV 169
           +K   K++ ++    +  +  +Y   +  LCK   +GNV +  +LV    ++ + PT   
Sbjct: 102 VKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWD-ELVGVYREFAFSPT--- 157

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            ++ +++     G    +L   D + + G +P+  + + LL    K    H A  +   +
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           I  G  P++   ++++   CK+G+ +EA  F + + + G EPN+V+Y+ L+      G  
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNP 348
           E A  +L  M     S  +VTY +LI       K D A KVL  M  +    P   +Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I   C  GK+D  V+ LD+M     K N    N L    C  G++ EA  +I  + +  
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD-W 396

Query: 408 NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           N  P  + Y  ++   CR+G T +AF L  +M + G  P   TY++L++GLC  G  ++A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L+I+ +M +    PD   ++ LL GL K    + +  +++ ++ +G   +  T+  ++ G
Sbjct: 457 LQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516

Query: 527 IAHQDELELSAEVLKELQ 544
           +    ++  + E+  +++
Sbjct: 517 LCKMGKMVEAEEIFDKMK 534


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 241/474 (50%), Gaps = 9/474 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKAN------KMKKAIKVMEMMVSSGIIPDASSYTYL 139
            E M S G  P+V   T ++   CK N        ++A +++E M  +G  P   +Y+  
Sbjct: 237 FEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTY 296

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LC+ G V  A+  V  +       N   YN+++ GLC  G L+++L+ L+ +   G+
Sbjct: 297 IYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+ +TYS L+    K+  V   + L++++     +P+LVSY+ L  GLCK+  ++ ++ 
Sbjct: 357 SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLD 416

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            FRDL + G++ +  +Y+IL++  CM+G  + A++L+ EM   + +P    +  L+    
Sbjct: 417 IFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC 476

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G   +AL+  + M++G   PS A+ N II   C EG+V+  +  +++M  +   PN  
Sbjct: 477 KMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLF 536

Query: 380 TYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYE 437
           TYN  +  LC   K + A  +   L  K+N  P    Y  +I    ++  + +A  L   
Sbjct: 537 TYNAVINRLCKERKSERALELF-PLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYAR 595

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M K G TPD   Y+ LI  LC    + EA  +F  M E    PD  ++ +++ G C+   
Sbjct: 596 MLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGD 655

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
              +  +F  M+++G +P   TYT LV+G    + ++++  ++ E++ + +  +
Sbjct: 656 MRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPD 709



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 200/405 (49%), Gaps = 1/405 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L++A   LE M S G  PDV   + L++  CK   ++K + ++E M  S + P   SY+
Sbjct: 340 ELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYS 399

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L + LCKK     ++ +   +   GY  +   Y+ L++G CM G+L+ + + ++ +++ 
Sbjct: 400 SLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRN 459

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L P+   +  L+    K      A++  + ++  G  P++ + NV++   C+EGR EEA
Sbjct: 460 NLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEA 519

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++ ++G  PN+ +YN ++  LC E + E A EL   M   +  P++V Y+ LI  
Sbjct: 520 LNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDG 579

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            A    +  AL +   M+K    P   +Y  +I  LC   ++        +M      P+
Sbjct: 580 FAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPD 639

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           + +Y   +A  C +G +++A+A+   +  + +      Y  ++   C+  +   A  L+ 
Sbjct: 640 KISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLID 699

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           EM + G TPD  TY+ LI      G +++ALE+   M+E    PD
Sbjct: 700 EMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 212/450 (47%), Gaps = 10/450 (2%)

Query: 103 NLLYDLCKANKM-KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           +LL  +  AN M + A+ V      +G+     S  +L+ CL +     +   L E+M+ 
Sbjct: 183 DLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKS 242

Query: 162 YGYPTNTVTYNSLVRGLCMLGNL-------NQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
            G P N  TY  ++   C  GN         Q+ + L+ + + G  P   TYS  +    
Sbjct: 243 TGPPPNVFTYTIMMNFYCK-GNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLC 301

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           +   V +A+  +  +I+  G  N+  YN ++ GLCK+G  +EA++   ++ S G  P+V 
Sbjct: 302 RVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVY 361

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y+IL+   C +G  E+   L+ EM   +  P++V+Y+ L   L     +D +L +  ++
Sbjct: 362 TYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDL 421

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
               ++    +Y+ +I   C +G +D   K +++M      P+   +  L    C +G  
Sbjct: 422 GAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLW 481

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
             A      +              +I + CR+G+  +A  L+ EM   G  P+ +TY+++
Sbjct: 482 VNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAV 541

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I  LC E   E ALE+F +M + +  P V  ++ L+ G  K   +  +L ++  M++ G 
Sbjct: 542 INRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV 601

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            P+   YTIL+  + H+  +  +  + K++
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKM 631



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 151/316 (47%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A   +E MV     PD     +L++  CK      A++   MM+  GI+P  ++   
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNV 505

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++  C++G V  A+ L+ +M+  G   N  TYN+++  LC      ++L+    ++++ 
Sbjct: 506 IIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++P+   YS L++   K+     A+ L   ++  G  P++V+Y +L+  LC   R  EA 
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+ +   G  P+ +SY  ++   C  G   +A  L  EM      PT+VTY  L+   
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + D A  ++DEM +    P   +YN +IA     G +D  ++ L++M      P+ 
Sbjct: 686 CKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDH 745

Query: 379 GTYNGLAMLCGVGKVQ 394
            TY  L  L    K++
Sbjct: 746 MTYMMLEWLLKAKKLK 761



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 183/421 (43%), Gaps = 46/421 (10%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           + + ++ L++       L  ++    +  + GL  +  + +FLL+   +         L 
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCK------EGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           +++ + G  PN+ +Y +++   CK      +  T +A     ++   G  P VV+Y+  +
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC  G  E A + +  +   +    +  YN +I  L   G+ D ALKVL+EM      
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
           P   +Y+ +I   C +G V+  +  +++M +   +P+  +Y+ L   LC       +  I
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL-- 457
            + LG       Q  Y  +I   C +G    A +L+ EM +    PD   + SL+ G   
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477

Query: 458 ---------------------------------CMEGLIEEALEIFVVMEEYDYKPDVDN 484
                                            C EG +EEAL +   M+     P++  
Sbjct: 478 MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE----LELSAEVL 540
           +NA++  LCK R+++ +LE+F +M+++  +P+   Y+ L++G A Q      L L A +L
Sbjct: 538 YNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARML 597

Query: 541 K 541
           K
Sbjct: 598 K 598



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 122/244 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ ++ +A   +  M ++G  P++     ++  LCK  K ++A+++  +M+   ++
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVL 567

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    Y+ L++   K+ N   A+ L  +M   G   + V Y  L+  LC    + ++   
Sbjct: 568 PSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNL 627

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++ + G+ P+  +Y+ ++    +   +  A  L ++++ +G  P +V+Y  L+ G CK
Sbjct: 628 FKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCK 687

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R + A     ++  KG  P+VV+YN+L+ +    G  ++A E+L EM      P  +T
Sbjct: 688 MNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMT 747

Query: 311 YNIL 314
           Y +L
Sbjct: 748 YMML 751



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 153/348 (43%), Gaps = 62/348 (17%)

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM------------------ 299
           I+F   +   GF  ++ ++  ++  L + G   E   LL ++                  
Sbjct: 109 IKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPIL 168

Query: 300 --DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
                D + +++ +++LI   A +   ++A+ V  +  K     S  S N ++  L    
Sbjct: 169 LESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEAN 228

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTY-------------------------------NG--- 383
           + + +    ++M      PN  TY                               NG   
Sbjct: 229 RREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESP 288

Query: 384 --------LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
                   +  LC VG V+ A   ++SL +         Y  +I  LC+KG+  +A ++L
Sbjct: 289 TVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVL 348

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G +PD YTYS LI G C +G +E+ L +   M+  + +P + ++++L  GLCK 
Sbjct: 349 EEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKK 408

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R +D+SL++F+ +   G   ++T Y+IL++G   Q +L+ + ++++E+
Sbjct: 409 RLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEM 456


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 225/450 (50%), Gaps = 5/450 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A+  LE M+ KG  P+V   T L+  LCKAN++ +A +++E MV  G  P+  +Y+ 
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LCK+G V  A +L + ME    P N VT+N L+ GLC    + ++ Q   R+ + G
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG-GKPNLVSYNVLLTGLCKEGRTEEA 257
             P+  TY+ L++   K   V  A +L   I   G    N V+Y+ L  G    GR  +A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R F  L  KGF P++ +Y  L+   C   R  E  EL+ EM      P + T + ++G 
Sbjct: 428 CRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 487

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-- 375
           L     T+ A+++ D M        A  YN ++  +    K D  +  L+Q+  +R +  
Sbjct: 488 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKF 547

Query: 376 -PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+    + L   LC VGK  +A  ++  +  +  ++    Y  +++ L R  +  +A Q
Sbjct: 548 NPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQ 607

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M   G  P+  T + +I  LC    +++A E+   M +    PD++  N L+ G C
Sbjct: 608 VFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 667

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           KS R DL+ ++ + M E G  PN+TT+ +L
Sbjct: 668 KSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 248/545 (45%), Gaps = 82/545 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A   L  MV++G  PD V  + L+  LCK    ++A +V+E ++  G+    +++ 
Sbjct: 141 KFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFE 200

Query: 138 YLVNCLCKKGN-VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            ++  LC K N V  A +++  +   G+    + +N ++ G C   +L+ + + L+ +I+
Sbjct: 201 TIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIE 260

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG VPN FT++ L+    K   V  A +LL+ ++  G  PN+V+Y+ ++ GLCK+G+ ++
Sbjct: 261 KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDD 320

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F+ +  +   PNVV++NIL+  LC   R EEA +L   M     +P I+TYN LI 
Sbjct: 321 AYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLID 380

Query: 317 SLA-------------------------------YH-----GKTDHALKVLDEMVKGRFR 340
            L                                +H     G+   A ++   +V   F 
Sbjct: 381 GLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFS 440

Query: 341 PSAASYNPIIARLCSEGKV-----------------------------------DLVVKC 365
           P  A+Y  +I   C   +                                    +  ++ 
Sbjct: 441 PDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQL 500

Query: 366 LDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQN---SSPQEFYKYV 418
            D M  R C  +   YN    G+A      K  +A A+++ + +K++   +        +
Sbjct: 501 FDSMAARGCTDDALIYNLVVEGMAR---ASKHDKALAVLEQVIDKRDRKFNPSSSAVDAL 557

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           + SLC+ GKT  A QLL++M++ GF     +Y+ L+ GL      +EA ++F  M     
Sbjct: 558 VESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGP 617

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P++   N ++  LC + + D + E+ Q M + G  P+  T   L+ G       +L+ +
Sbjct: 618 APEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARK 677

Query: 539 VLKEL 543
           +L+E+
Sbjct: 678 LLEEM 682



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 234/491 (47%), Gaps = 39/491 (7%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LC+ N+ ++A+ +    ++   +P+  +Y  L+      G++  A+QL+E+M+  G+  N
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            V + +L++GLC  G + ++L+   R + K   P+  TY+ L+ A  K      A  +L 
Sbjct: 92  AVVHTTLMKGLCDAGRVVEALEHF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLR 150

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD------------------------ 263
           +++A+G  P+ V+++ L+ GLCK G  E+A R   D                        
Sbjct: 151 EMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKY 210

Query: 264 ------------LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
                       + +KGF P V+ +N+++   C     + A +LL  M      P + T+
Sbjct: 211 NSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTF 270

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
            ILI  L    +   A ++L++MV G   P+  +Y+ +I  LC +G+VD   +    M  
Sbjct: 271 TILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 330

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R C PN  T+N L   LC   +++EA  +   +     +     Y  +I  LC+  +  +
Sbjct: 331 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 390

Query: 431 AFQLLYEMTKYGFT-PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           AFQL   + + G +  ++ TYS+L  G    G + +A  IF ++ +  + PD+  + +L+
Sbjct: 391 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           L  CK+ R    +E+ + M  KG  P   T + ++ G+   +  E + ++   +  R   
Sbjct: 451 LEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT 510

Query: 550 SESAVERLVMQ 560
            ++ +  LV++
Sbjct: 511 DDALIYNLVVE 521



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 206/391 (52%), Gaps = 11/391 (2%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  + N  +  LC L    ++L      + +  +PN FTY  L+        +  A++LL
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           +++ + G + N V +  L+ GLC  GR  EA+  FR + +K   P+V++Y  L+ +LC  
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKA 139

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G+++EA  +L EM     +P  VT++ LI  L   G  + A +VL+++++     S A++
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 347 NPIIARLCSE-GKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLG 404
             II RLC++   V+L  K L  +  +   P    +N  +   C    +  A+ +++ + 
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 405 NKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
            K    P  F +  +IT LC+  +  +A QLL +M   G +P+  TYS++I GLC +G +
Sbjct: 260 EK-GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQV 318

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           ++A E+F +ME  +  P+V   N L+ GLCK++R + + +++  M E G  P+  TY  L
Sbjct: 319 DDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSL 378

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           ++G+        S +V +  QL Q + ES V
Sbjct: 379 IDGLCK------SFQVDEAFQLFQTIPESGV 403



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 242/534 (45%), Gaps = 80/534 (14%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R ++K   PDV+  T L++ LCKA K  +A  ++  MV+ G  PD  +++ L++ LCK G
Sbjct: 116 RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFG 175

Query: 148 NVGYAMQLVEKMEDY------------------------------------GYPTNTVTY 171
           +   A +++E +                                       G+    + +
Sbjct: 176 SEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMF 235

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N ++ G C   +L+ + + L+ +I+KG VPN FT++ L+    K   V  A +LL+ ++ 
Sbjct: 236 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVM 295

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G  PN+V+Y+ ++ GLCK+G+ ++A   F+ +  +   PNVV++NIL+  LC   R EE
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLA-------------------------------Y 320
           A +L   M     +P I+TYN LI  L                                +
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 415

Query: 321 H-----GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           H     G+   A ++   +V   F P  A+Y  +I   C   +   VV+ +++M  +   
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475

Query: 376 PNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           P   T +  A+L G+      + A  +  S+  +  +     Y  V+  + R  K  +A 
Sbjct: 476 PRVNTLS--AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKAL 533

Query: 433 QLLYEMT---KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            +L ++       F P S    +L+  LC  G  ++A ++   M E  +   V ++N LL
Sbjct: 534 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLL 593

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            GL + +R D + +VF+ M+  G  P  +T  +++  +    +++ + E+++ +
Sbjct: 594 SGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRM 647



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 152/316 (48%), Gaps = 4/316 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKG-HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
           D   +  ++++AF   + +   G    + V  + L +      +M  A ++  M+V  G 
Sbjct: 380 DGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGF 439

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD ++YT L+   CK       ++LVE+M   G+P    T ++++ GL    +  +++Q
Sbjct: 440 SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQ 499

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK---PNLVSYNVLLT 246
             D +  +G   +A  Y+ ++E   +      A+ +L+ +I K  +   P+  + + L+ 
Sbjct: 500 LFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVE 559

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            LC+ G+T++A +    +  +GF   V SYN LL  L    RW+EA ++   M     +P
Sbjct: 560 SLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAP 619

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            I T N++I  L    K D A +++  M K    P   + N +I   C  G+ DL  K L
Sbjct: 620 EISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLL 679

Query: 367 DQMFHRRCKPNEGTYN 382
           ++M     +PN+ T++
Sbjct: 680 EEMTEAGLEPNDTTHD 695



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 142/292 (48%), Gaps = 7/292 (2%)

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           E +  F D        NV S N  L  LC   R +EA  L          P   TY ILI
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM--FHRR 373
              +  G  D A+++L+EM    F  +A  +  ++  LC  G+   VV+ L+      + 
Sbjct: 65  RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGR---VVEALEHFRAMAKD 121

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+  TY  L   LC  GK  EA  +++ +  +  +     +  +I  LC+ G   QAF
Sbjct: 122 CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAF 181

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCME-GLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           ++L ++ + G       + ++I+ LC +   +E A ++  V+    + P V  FN ++ G
Sbjct: 182 RVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVING 241

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            CK++  D + ++ ++MIEKG +PN  T+TIL+ G+   + +  + ++L+++
Sbjct: 242 FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 66/132 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K +DA   L +M  +G    V     LL  L +  +  +A +V E MVS+G  P+ S+  
Sbjct: 566 KTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVN 625

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC    V  A +LV++M   G   +  T N+L+ G C  G  + + + L+ + + 
Sbjct: 626 VVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEA 685

Query: 198 GLVPNAFTYSFL 209
           GL PN  T+  L
Sbjct: 686 GLEPNDTTHDLL 697



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 49/100 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + ++A    E MVS G  P++     ++  LC A K+  A ++++ M   G  PD  
Sbjct: 598 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 657

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           +   L+   CK G    A +L+E+M + G   N  T++ L
Sbjct: 658 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score = 38.9 bits (89), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 44/80 (55%)

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +V + N  L  LC+  R   +L +F+  + +  MPN+ TY IL+ G +   +L+++ ++L
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 541 KELQLRQVVSESAVERLVMQ 560
           +E++       + V   +M+
Sbjct: 81  EEMKSSGFEGNAVVHTTLMK 100


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 235/506 (46%), Gaps = 37/506 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ D  L +  M   G  P+V   + LL  L +  K ++ +++ + +V++G+ PD  
Sbjct: 167 QNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCY 226

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC--------------- 179
            YT +V CLC+  +   A +++ + E  G   + VTYN  + GLC               
Sbjct: 227 IYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSL 286

Query: 180 ---------------MLG-----NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
                          +LG          ++ +D +I+ G VP+    S L+E   K   +
Sbjct: 287 GEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSI 346

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A +LL+ +   G  PNL  YN ++  LCK G+ EEA   F  +  +G  PN V+Y IL
Sbjct: 347 EGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTIL 406

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +       + + A     +M     S T+ +YN +I      GK   A  +  EMV    
Sbjct: 407 IDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGL 466

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
           +P+ A+Y  +I+  C +G V    K   +M  +   PN  T+  L   LC + K+ EA  
Sbjct: 467 KPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK 526

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +   +   +    +  Y  +I   CR+G T +AF+LL EM K G +PD+YTY  LI GLC
Sbjct: 527 LFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLC 586

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G + EA E    +     + D   + ALL G CK  R   +L   Q M+ +G   +  
Sbjct: 587 STGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLV 646

Query: 519 TYTILVEGIAHQDELELSAEVLKELQ 544
           +Y +L+ G  +Q++  +  E+L+E+ 
Sbjct: 647 SYAVLISGALNQND-RILFELLREMH 671



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 213/440 (48%), Gaps = 8/440 (1%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           KG K D+V    L+  LC+  + +  +++M+ M+  G +P  ++ + L+  L K G++  
Sbjct: 289 KGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEG 348

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A +L+ K+   G   N   YNS++  LC  G L ++      + ++GL PN  TY+ L++
Sbjct: 349 AFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILID 408

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              +   +  A    + +I  G    + SYN ++   CK G+ + A   F+++  KG +P
Sbjct: 409 GFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKP 468

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
            V +Y  L+   C +G   +A +L  EM G   +P  VT+  LI  L    K   A K+ 
Sbjct: 469 TVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLF 528

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGV 390
           DEMV+ +  P+  +YN +I   C EG      + LD+M  +   P+  TY  L A LC  
Sbjct: 529 DEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCST 588

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G+V EA   I  L +K     +  Y  ++   C++G+  +A     EM   G   D  +Y
Sbjct: 589 GRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSY 648

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYK---PDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           + LI G     L +    +F ++ E   K   PD   +  L+ G  KS     + E + +
Sbjct: 649 AVLISG----ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYI 704

Query: 508 MIEKGQMPNETTYTILVEGI 527
           MI +G +PN  TYT LV G+
Sbjct: 705 MIGEGYVPNSVTYTALVNGL 724



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 220/450 (48%), Gaps = 2/450 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ M+  G+ P     + L+  L K   ++ A +++  +   G++P+   Y  ++N LCK
Sbjct: 318 MDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCK 377

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A  L   M + G   N VTY  L+ G      L+ +  + +++I+ G+    ++
Sbjct: 378 TGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYS 437

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++    K   +  A  L  +++ KG KP + +Y  L++G CK+G   +A + + ++ 
Sbjct: 438 YNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMT 497

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  PN V++  L+  LC   +  EA++L  EM      P  VTYN+LI      G T 
Sbjct: 498 GKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTT 557

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++LDEM+K    P   +Y P+IA LCS G+V    + ++ + H+  + +E  Y  L 
Sbjct: 558 RAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALL 617

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G+++EA    Q +  +        Y  +I+    +      F+LL EM   G  
Sbjct: 618 QGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI-LFELLREMHGKGMQ 676

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD+  Y+ LI G    G +++A E + +M    Y P+   + AL+ GL K+   + +  +
Sbjct: 677 PDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLL 736

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           F+ M+    +PN  TY   ++ +  +  +E
Sbjct: 737 FKRMLVGEAIPNHITYGCFLDHLTKEGNME 766



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 232/519 (44%), Gaps = 47/519 (9%)

Query: 52  ISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA 111
           ++P D  YT          D   R  KL+ AF    +M+  G    V    +++   CK 
Sbjct: 396 LNPNDVTYTILI-------DGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKF 448

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
            KMK A  + + MV  G+ P  ++YT L++  CK G V  A +L  +M   G   NTVT+
Sbjct: 449 GKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTF 508

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
            +L+ GLC +  + ++ +  D +++  ++PN  TY+ L+E   +E     A +LLD++I 
Sbjct: 509 TALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIK 568

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KG  P+  +Y  L+ GLC  GR  EA  F  DL  K    + + Y  LL+  C EGR +E
Sbjct: 569 KGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKE 628

Query: 292 A----------------------------------NELLAEMDGGDRSPTIVTYNILIGS 317
           A                                   ELL EM G    P  V Y ILI  
Sbjct: 629 ALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDG 688

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A +    M+   + P++ +Y  ++  L   G V+       +M      PN
Sbjct: 689 FIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPN 748

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSL--GNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             TY   L  L   G ++ A  +  ++  G+  N+     Y  +I   C+ GK  +A +L
Sbjct: 749 HITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVT---YNILIRGYCQIGKFQEAAKL 805

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L  M   G  PD  TYS+ I   C  G ++ A++++  M +   KPD   FN L+   C 
Sbjct: 806 LDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCL 865

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           +   D +L++   M+ +G  P ++TY  L+  +A +  L
Sbjct: 866 NGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 209/459 (45%), Gaps = 1/459 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L ++   G  P++    +++  LCK  K+++A  +  +M   G+ P+  +YT L++
Sbjct: 349 AFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILID 408

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
              ++  +  A     KM + G      +YNS++   C  G +  +      ++ KGL P
Sbjct: 409 GFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKP 468

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
              TY+ L+    K+  V  A KL  ++  KG  PN V++  L+ GLC+  +  EA + F
Sbjct: 469 TVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLF 528

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++      PN V+YN+L+   C EG    A ELL EM     SP   TY  LI  L   
Sbjct: 529 DEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCST 588

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G+   A + ++++     R     Y  ++   C EG++   +    +M  R  + +  +Y
Sbjct: 589 GRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSY 648

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             L         +  F +++ +  K        Y  +I    + G   +AF+  Y M   
Sbjct: 649 AVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGE 708

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G+ P+S TY++L+ GL   G + EA  +F  M   +  P+   +   L  L K    + +
Sbjct: 709 GYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENA 768

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           L++   M++ G   N  TY IL+ G     + + +A++L
Sbjct: 769 LQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLL 806



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 196/414 (47%), Gaps = 5/414 (1%)

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           +S +  L+    +   V   + +V  M DYG      T ++L+  L  +    Q L+  D
Sbjct: 155 SSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFD 214

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            L+  G+ P+ + Y+ +++   + +  + A ++++     G   ++V+YNV + GLCK  
Sbjct: 215 TLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSK 274

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R  EA+   R L  KG + ++V+Y  L+  LC    +E   E++ EM      P+    +
Sbjct: 275 RVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVS 334

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  L   G  + A ++L+++ K    P+   YN +I  LC  GK++        M  R
Sbjct: 335 GLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAER 394

Query: 373 RCKPNEGTYNGLAMLCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              PN+ TY    ++ G G   K+  AF     +     S+    Y  +I   C+ GK  
Sbjct: 395 GLNPNDVTYT--ILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMK 452

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A  L  EM   G  P   TY+SLI G C +GL+ +A +++  M      P+   F AL+
Sbjct: 453 MAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALI 512

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            GLC+  +   + ++F  M+E   +PNE TY +L+EG   +     + E+L E+
Sbjct: 513 CGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEM 566



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 145/288 (50%), Gaps = 2/288 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ +A +  + MV +G + D+V    L+      N  +   +++  M   G+ PD  
Sbjct: 622 KEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNV 680

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++   K GN+  A +    M   GY  N+VTY +LV GL   G +N++     R+
Sbjct: 681 IYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRM 740

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +    +PN  TY   L+   KE  +  A++L + ++ +G   N V+YN+L+ G C+ G+ 
Sbjct: 741 LVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML-QGSFANTVTYNILIRGYCQIGKF 799

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA +    +   G  P+ ++Y+  +   C  G  + A ++   M      P  V +N L
Sbjct: 800 QEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFL 859

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           I +   +G+ D AL++ ++M+    +P+ ++Y+ ++ +L    ++  V
Sbjct: 860 IHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907



 Score = 42.7 bits (99), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 429 YQAFQLLYE-MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
           +Q F+  +E   KY F+  S  +  LI+       + + + +  +M +Y   P+V   +A
Sbjct: 137 HQIFENFFESYKKYKFSSSS-GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSA 195

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           LL  L + R+    LE+F  ++  G  P+   YT++V+ +    +   + E++ + +
Sbjct: 196 LLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAE 252


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 236/459 (51%), Gaps = 4/459 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M++ G    +     LL+ LCK   +K+  K+++ ++  G++P+  +Y + +  LC+KG
Sbjct: 206 KMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKG 265

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A+++V ++ D G   + VTYN L+ GLC      ++  +L +L+ +GL P++FTY+
Sbjct: 266 ELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYN 325

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    K   V  A ++L + +  G  P+  +Y  L+ GLC EG T  A+  F +   K
Sbjct: 326 TLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G +PNV+ YN L++ L  +G   EA +L +EM      P + T+NIL+  L   G    A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
             ++  M+   + P   ++N +I    ++ K++  ++ LD M      P+  TYN L   
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
           LC   K ++     +++  K   +P  F +  ++ SLCR  K  +A  LL EM      P
Sbjct: 506 LCKTSKYEDVMETYKTMVEK-GCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNP 564

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEE-YDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           D+ T+ +LI G C  G ++ A  +F  MEE Y        +N ++    +     ++ ++
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           FQ M+++   P+  TY ++V+G      ++L  + L E+
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEM 663



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 228/475 (48%), Gaps = 1/475 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+ +A    ERM     +P V     ++  L  +    +A KV   M   GI PD  
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+T  +   C+      A++L+  M   G   N V Y ++V G       ++  +   ++
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+     T++ LL    K+  V    KLLD +I +G  PNL +YN  + GLC++G  
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+R    L  +G +P+VV+YN L+  LC   +++EA   L ++      P   TYN L
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G    A ++L   V   F P   +Y  +I  LC EG+ +  +   ++   +  
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPN   YN L   L   G + EA  +   +  K      + +  ++  LC+ G    A  
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+  M   G+ PD +T++ LI G   +  +E ALEI  VM +    PDV  +N+LL GLC
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           K+ + +  +E ++ M+EKG  PN  T+ IL+E +    +L+ +  +L+E++ + V
Sbjct: 508 KTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSV 562



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 234/467 (50%), Gaps = 1/467 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM  +G  PDV   T  +   C+ ++   A++++  M S G   +  +Y  +V    ++ 
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
                 +L  KM   G      T+N L+  LC  G++ +  + LD++I++G++PN FTY+
Sbjct: 196 FKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           F ++   ++  + AA++++  +I +G KP++V+YN L+ GLCK  + +EA  +   L ++
Sbjct: 256 FFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNE 315

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G EP+  +YN L+   C  G  + A  +L         P   TY  LI  L + G+T+ A
Sbjct: 316 GLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRA 375

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
           L + +E +    +P+   YN +I  L ++G +    +   +M  +   P   T+N L   
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNG 435

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC +G V +A  +++ + +K        +  +I     + K   A ++L  M   G  PD
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPD 495

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            YTY+SL+ GLC     E+ +E +  M E    P++  FN LL  LC+  + D +L + +
Sbjct: 496 VYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLE 555

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            M  K   P+  T+  L++G     +L+ +  + ++++   +VS S 
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCST 602



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 233/470 (49%), Gaps = 2/470 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L++++ +G  P++      +  LC+  ++  A++++  ++  G  PD  +Y YL+  LCK
Sbjct: 239 LDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCK 298

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A   + K+ + G   ++ TYN+L+ G C  G +  + + L   +  G VP+ FT
Sbjct: 299 NSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFT 358

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L++    E   + A+ L ++ + KG KPN++ YN L+ GL  +G   EA +   ++ 
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMS 418

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P V ++NIL+  LC  G   +A+ L+  M      P I T+NILI   +   K +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
           +AL++LD M+     P   +YN ++  LC   K + V++    M  + C PN  T+N  L
Sbjct: 479 NALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILL 538

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK-YGF 443
             LC   K+ +A  +++ + NK  +     +  +I   C+ G    A+ L  +M + Y  
Sbjct: 539 ESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMV 598

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           +  + TY+ +I     +  +  A ++F  M +    PD   +  ++ G CK+   DL  +
Sbjct: 599 SCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYK 658

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
               M+E G +P+ TT   ++  +  +D +  +A ++  +  + +V E+ 
Sbjct: 659 FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 236/493 (47%), Gaps = 15/493 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L+ A   + R++ +G KPDVV    L+Y LCK +K ++A   +  +V+ G+ PD+ +Y 
Sbjct: 266 ELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYN 325

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK G V  A +++      G+  +  TY SL+ GLC  G  N++L   +  + K
Sbjct: 326 TLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN   Y+ L++    +  +  A +L  ++  KG  P + ++N+L+ GLCK G   +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + + SKG+ P++ ++NIL+     + + E A E+L  M      P + TYN L+  
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K +  ++    MV+    P+  ++N ++  LC   K+D  +  L++M ++   P+
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGN---KQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             T+  L    C  G +  A+ + + +        S+P   Y  +I +   K     A +
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPT--YNIIIHAFTEKLNVTMAEK 623

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM      PD YTY  ++ G C  G ++   +  + M E  + P +     ++  LC
Sbjct: 624 LFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLC 683

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
              R   +  +   M++KG +P        V  I   D+ E++A    +L L  ++ +S 
Sbjct: 684 VEDRVYEAAGIIHRMVQKGLVPEA------VNTIFDHDKKEVAA---PKLVLEDLLKKSC 734

Query: 554 VERLVMQYDFEGI 566
           +     +  F+G+
Sbjct: 735 ITYYAYELLFDGL 747



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 134/328 (40%), Gaps = 48/328 (14%)

Query: 256 EAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAE---------------- 298
           +A+  F  +  + GF+  + +Y  ++  L + G++E   E+L +                
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81

Query: 299 --------------------MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
                               MD  D  PT+ +YN ++  L   G  D A KV   M    
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG 141

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV----- 393
             P   S+   +   C   +    ++ L+ M  + C+ N   Y  +     VG       
Sbjct: 142 ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTV-----VGGFYEENF 196

Query: 394 -QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
             E + +   +     S     +  ++  LC+KG   +  +LL ++ K G  P+ +TY+ 
Sbjct: 197 KDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNF 256

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
            I+GLC +G ++ A+ +   + +   KPDV  +N L+ GLCK+ +   +      ++ +G
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG 316

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVL 540
             P+  TY  L+ G      ++L+  +L
Sbjct: 317 LEPDSFTYNTLIAGYCKGGMVQLAERIL 344



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 44/258 (17%)

Query: 327 ALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN---EGTYN 382
           AL++ + M K   F+ + ++Y  II +L   GK + + + L  M  R+   N   EG Y 
Sbjct: 23  ALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDM--RQNVGNHMLEGVYV 80

Query: 383 GLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTK 440
           G     G  GKVQEA  + + + +  +  P  F Y  +++ L   G   QA ++   M  
Sbjct: 81  GAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRD 139

Query: 441 YGFTPDSYTYSSLIRGLCM-----------------------------------EGLIEE 465
            G TPD Y+++  ++  C                                    E   +E
Sbjct: 140 RGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDE 199

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
             E+F  M        +  FN LL  LCK        ++   +I++G +PN  TY   ++
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQ 259

Query: 526 GIAHQDELELSAEVLKEL 543
           G+  + EL+ +  ++  L
Sbjct: 260 GLCQKGELDAAVRMVGRL 277


>gi|293333002|ref|NP_001168049.1| uncharacterized protein LOC100381779 [Zea mays]
 gi|223945693|gb|ACN26930.1| unknown [Zea mays]
 gi|414871082|tpg|DAA49639.1| TPA: hypothetical protein ZEAMMB73_603879 [Zea mays]
          Length = 582

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 226/488 (46%), Gaps = 42/488 (8%)

Query: 55  KDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKM 114
           K   Y    R+  NN        KL  A   ++ MV  G  PD      L+  L +    
Sbjct: 122 KTGCYAYSLRRHCNNG-------KLIQACRIIDEMVLHGQVPDSKCCVRLIRGLVRTGNT 174

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
            KA  V+E+MV SG +PD  +   L+  LC +G +  AM+++E M   G   + +T+N+L
Sbjct: 175 NKARHVLEVMVLSGGVPDTITCNMLIGQLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTL 234

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +R +C     ++++ F    ++ G  P   T + L++   K+ G   A+++LD++  +G 
Sbjct: 235 IRCMCSHHLYDRAVSFWKEQLKIGWPPYEMTSTLLVDLICKQCGPMRALEVLDELDLEGC 294

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P++VSYN L++  CK G  ++A      L ++G EPN  +Y ILL SLC + RW E  +
Sbjct: 295 QPHVVSYNTLISASCKAGCLKDAKLILTRLSAEGLEPNGTTYCILLHSLCDKRRWSEVGD 354

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           LLA M   +  P +  YNI I     +G  D A+ VL+ MV  +  P   +YN +     
Sbjct: 355 LLAHMKQANHKPDVTAYNIFINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTL----- 409

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
                      L+ +  R                  G VQEA  I  S+        +  
Sbjct: 410 -----------LNAISKR------------------GMVQEALGIFHSIRENGCQVVRIT 440

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I +L ++G    A  L  EM   G  PD  TY SLI G C + + +EALE+   M 
Sbjct: 441 YNTLIDALAKRGDIINAMTLFDEMIVDGINPDDVTYGSLIMGFCKKNMAKEALELLNQML 500

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
              ++     F+ ++  LCK  + + + E+ ++M+ +        Y  +V  +A    L+
Sbjct: 501 ALGFEVKATTFSMMIQALCKGCKAEAAAEILRVMVSRNVNHRSAFYLSIVTRVAKSGRLK 560

Query: 535 LSAEVLKE 542
             A++L +
Sbjct: 561 -EAQILHQ 567



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 128/260 (49%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA L L R+ ++G +P+      LL+ LC   +  +   ++  M  +   PD ++Y  
Sbjct: 314 LKDAKLILTRLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVTAYNI 373

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            +N  C+ G++  A+ ++E M       + VTYN+L+  +   G + ++L     + + G
Sbjct: 374 FINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLNAISKRGMVQEALGIFHSIRENG 433

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
                 TY+ L++A  K   +  AM L D++I  G  P+ V+Y  L+ G CK+   +EA+
Sbjct: 434 CQVVRITYNTLIDALAKRGDIINAMTLFDEMIVDGINPDDVTYGSLIMGFCKKNMAKEAL 493

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                + + GFE    ++++++++LC   + E A E+L  M   + +     Y  ++  +
Sbjct: 494 ELLNQMLALGFEVKATTFSMMIQALCKGCKAEAAAEILRVMVSRNVNHRSAFYLSIVTRV 553

Query: 319 AYHGKTDHALKVLDEMVKGR 338
           A  G+   A  +  E+ + R
Sbjct: 554 AKSGRLKEAQILHQELYRAR 573


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 239/492 (48%), Gaps = 17/492 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RMV  G +PD +     +  +CK      A+ ++  M   S I P+ 
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ LCK G    +  L  +M+D G   N VTYN ++ G C+ G  + + + L  
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++++ + PN  TY+ L+ A  KE     A +L D+++ +G  PN ++YN ++ G CK+ R
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F  + +KG  P+V ++  L+   C   R ++  ELL EM         VTYN 
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +  +M+     P   + N ++  LC  GK+   ++    M   +
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 374 -----------CKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                       +P+  TYN   ++CG+   GK  EA  + + + ++        Y  +I
Sbjct: 494 MDLDASHPFNGVEPDVLTYN--ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC++ +  +A Q+   M    F+P+  T+++LI G C  G +++ LE+F  M      
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
            D   +  L+ G  K    + +L++FQ MI  G  P+  T   ++ G   ++ELE +  +
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671

Query: 540 LKELQLRQVVSE 551
           L++LQ  Q+  E
Sbjct: 672 LEDLQRYQLEDE 683



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 240/528 (45%), Gaps = 53/528 (10%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  K  + D+   T L+   C  +K+  A+     +   G+ PD  ++T L++ LC  
Sbjct: 105 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLD 164

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A+ L  ++       + +T+ +L+ GLC  G + +++  LDR+++ GL P+  TY
Sbjct: 165 HRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITY 220

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
              ++   K     +A+ LL  +      KPN+V Y+ ++ GLCK+GR  ++   F ++ 
Sbjct: 221 GTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ 280

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  PN+V+YN ++   C+ GRW  A  LL EM     SP +VTYN LI +    GK  
Sbjct: 281 DKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFF 340

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++ DEM+     P+  +YN +I   C + ++D        M  + C P+  T+  L 
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              CG  ++ +   ++  +  +   +    Y  +I   C  G    A  L  +M   G  
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVM------------------------------- 473
           PD  T ++L+ GLC  G +++ALE+F  M                               
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520

Query: 474 ------------EEYDYK---PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
                       EE  ++   PD   +++++ GLCK  R D + ++F  M  K   PN  
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGI 566
           T+  L+ G      ++   E+  E+  R +V++ A+  + + Y F  +
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD-AIIYITLIYGFRKV 627



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 229/506 (45%), Gaps = 44/506 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA      M+     P V+    L+  + +  +    I + + M    I  D  S+T 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM------------------ 180
           L+ C C    + +A+    K+   G   + VT+ +L+ GLC+                  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 181 -------------LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
                         G + +++  LDR+++ GL P+  TY   ++   K     +A+ LL 
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 228 DIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            +      KPN+V Y+ ++ GLCK+GR  ++   F ++  KG  PN+V+YN ++   C+ 
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GRW  A  LL EM     SP +VTYN LI +    GK   A ++ DEM+     P+  +Y
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
           N +I   C + ++D        M  + C P+  T+  L    CG  ++ +   ++  +  
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           +   +    Y  +I   C  G    A  L  +M   G  PD  T ++L+ GLC  G +++
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481

Query: 466 ALEIFVVMEEYD-----------YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           ALE+F  M++              +PDV  +N L+ GL    +   + E+++ M  +G +
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 515 PNETTYTILVEGIAHQDELELSAEVL 540
           P+  TY+ +++G+  Q  L+ + ++ 
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMF 567



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 170/372 (45%), Gaps = 6/372 (1%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L  ++     +++   +P+   ++ L+ A  +       + L   +  K  + ++ S+ +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C   +   A+  F  L   G  P+VV++  LL  LC++ R  EA +L  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P ++T+  L+  L   G+   A+ +LD MV+   +P   +Y   +  +C  G     +
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 364 KCLDQMFH-RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
             L +M      KPN   Y+ +   LC  G+  ++  +   + +K        Y  +I  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            C  G+   A +LL EM +   +P+  TY++LI     EG   EA E++  M      P+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              +N+++ G CK  R D + ++F +M  KG  P+  T+T L++G      ++   E+L 
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 542 ELQLRQVVSESA 553
           E+  R +V+ + 
Sbjct: 418 EMPRRGLVANTV 429


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 226/460 (49%), Gaps = 7/460 (1%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            + +DA    + M+ K    D      L+  LC   ++++ +K++E    +G IP    Y 
Sbjct: 958  RWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYN 1017

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++  C++G++G  + L+ +ME  G+    VTY SL+  L   G+L +       + ++
Sbjct: 1018 VLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR 1077

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            G  PN   Y+ +++A    R    AM +L  + A G  P+++++N L+TGLC EG   +A
Sbjct: 1078 GFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 1137

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F R+   +   PN +SY  L+   CM G    A++LL EM G   +P +VT+  LI  
Sbjct: 1138 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHG 1197

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            L   GK   AL V ++M + +  P    YN +I+ LC +  +      L++M  +  +P+
Sbjct: 1198 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPD 1257

Query: 378  EGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            E  Y    +G      +G  ++ F  ++  G   +         +I   C+ G   +A  
Sbjct: 1258 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVS---CNAMIKGYCQFGMMSEAIL 1314

Query: 434  LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
             +  M K G  PD +TY+++I G   +G +  AL     M +   KP+V  +++L+ G C
Sbjct: 1315 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1374

Query: 494  KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            K+  TD +  +F  M  +   PN  TYTIL+  +  +D++
Sbjct: 1375 KTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKV 1414



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 186/398 (46%), Gaps = 2/398 (0%)

Query: 156  VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI-QKGLVPNAFTYSFLLEAAY 214
            ++ M   G         +LV      G L ++ +  +R+  Q G +P     + LL+   
Sbjct: 895  LQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLV 954

Query: 215  KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
            ++R    A KL D+++ K    +  S  VL+ GLC E R EE ++        G  P+VV
Sbjct: 955  EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1014

Query: 275  SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
             YN+L+   C  G       LL EM+     PT+VTY  LI  L   G  +    +  EM
Sbjct: 1015 FYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1074

Query: 335  VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
             K  F P+   YN +I  LC+       +  L QMF   C P+  T+N L   LC  G V
Sbjct: 1075 RKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1134

Query: 394  QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            ++A   ++    ++ +  Q  Y  +I   C +G+   A  LL EM   G TPD  T+ +L
Sbjct: 1135 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1194

Query: 454  IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
            I GL + G + EAL +   M E    PDV+ +N L+ GLCK R    +  + + M+EK  
Sbjct: 1195 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1254

Query: 514  MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             P+E  Y  L++G    + L  + ++ + ++ + V  +
Sbjct: 1255 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPD 1292



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 200/457 (43%), Gaps = 14/457 (3%)

Query: 84   LQLERMVSKGHK-----------PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
            L LER V +G K           P VV    L+   C+   M + + ++  M ++G +P 
Sbjct: 988  LCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPT 1047

Query: 133  ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
              +Y  L+N L KKG++     L  +M   G+  N   YNS++  LC   +  Q++  L 
Sbjct: 1048 LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILK 1107

Query: 193  RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            ++   G  P+  T++ L+     E  V  A   L + I +   PN +SY  L+ G C  G
Sbjct: 1108 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 1167

Query: 253  RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
                A     ++  +G  P+VV++  L+  L + G+  EA  +  +M      P +  YN
Sbjct: 1168 ELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 1227

Query: 313  ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +LI  L        A  +L+EM++   +P    Y  +I        +    K  + M H+
Sbjct: 1228 VLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHK 1287

Query: 373  RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
               P+  + N +    C  G + EA   + ++  K    P EF Y  VI+   ++G    
Sbjct: 1288 GVCPDIVSCNAMIKGYCQFGMMSEAILCMSNM-RKVGCIPDEFTYTTVISGYAKQGNLNG 1346

Query: 431  AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
            A + L +M K    P+  TYSSLI G C  G  + A  +F  M+     P+V  +  L+ 
Sbjct: 1347 ALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIG 1406

Query: 491  GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
             L K  +   +   F+ M+     PN+ T   LV G+
Sbjct: 1407 SLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1443



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 193/428 (45%), Gaps = 16/428 (3%)

Query: 82   AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            A + L++M + G  PD++    L+  LC    ++KA   +   +   + P+  SYT L++
Sbjct: 1102 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 1161

Query: 142  CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
              C +G +  A  L+ +M   G+  + VT+ +L+ GL + G ++++L   +++ ++ + P
Sbjct: 1162 GFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 1221

Query: 202  NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
            +   Y+ L+    K+R + AA  +L++++ K  +P+   Y  L+ G  +     +A + F
Sbjct: 1222 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1281

Query: 262  RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
              +  KG  P++VS N +++  C  G   EA   ++ M      P   TY  +I   A  
Sbjct: 1282 EFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1341

Query: 322  GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            G  + AL+ L +M+K + +P+  +Y+ +I   C  G  D        M      PN  TY
Sbjct: 1342 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 1401

Query: 382  NGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL------------CRKGKT 428
              L   L    KV  A    +++     S       Y++  L            C   + 
Sbjct: 1402 TILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEV 1461

Query: 429  YQAFQLLYEMTKYGFT---PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            +    LL    K  F    P +  Y+++I  LC   ++ EAL+    M +  Y P+   F
Sbjct: 1462 HGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 1521

Query: 486  NALLLGLC 493
             +LL G C
Sbjct: 1522 LSLLYGFC 1529



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 174/376 (46%), Gaps = 19/376 (5%)

Query: 86   LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            L  M+ +GH PDVV    L++ L  A K+ +A+ V E M    + PD + Y  L++ LCK
Sbjct: 1176 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1235

Query: 146  KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            K  +  A  ++E+M +     +   Y +L+ G     NL  + +  + +  KG+ P+  +
Sbjct: 1236 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVS 1295

Query: 206  YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
             + +++   +   +  A+  + ++   G  P+  +Y  +++G  K+G    A+R+  D+ 
Sbjct: 1296 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 1355

Query: 266  SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             +  +PNVV+Y+ L+   C  G  + A  L A M     SP +VTY ILIGSL    K  
Sbjct: 1356 KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVL 1415

Query: 326  HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
             A    + M+     P+  + + ++  L S         C   + +  C      +   A
Sbjct: 1416 RAGLYFETMLLNHCSPNDVTLHYLVNGLTS---------CTPCVINSICCNTSEVHGKDA 1466

Query: 386  MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            +L    K      ++  +G+ +NS+    Y  +I SLCR     +A      M K G+ P
Sbjct: 1467 LLVVFKK------LVFDIGDPRNSA----YNAIIFSLCRHNMLREALDFKNRMAKKGYVP 1516

Query: 446  DSYTYSSLIRGLCMEG 461
            +  T+ SL+ G C  G
Sbjct: 1517 NPITFLSLLYGFCSVG 1532



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 209/503 (41%), Gaps = 51/503 (10%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R   +    L L  M + G  P +V   +L+  L K   ++K   +   M   G  P+  
Sbjct: 1025 RRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1084

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             Y  +++ LC   +   AM ++++M   G   + +T+N+L+ GLC  G++ ++  FL   
Sbjct: 1085 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1144

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            I++ L PN  +Y+ L+        +  A  LL +++ +G  P++V++  L+ GL   G+ 
Sbjct: 1145 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1204

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--------------- 299
             EA+     +  +   P+V  YN+L+  LC +     A  +L EM               
Sbjct: 1205 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1264

Query: 300  -DGGDRS-------------------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
             DG  RS                   P IV+ N +I      G    A+  +  M K   
Sbjct: 1265 IDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1324

Query: 340  RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
             P   +Y  +I+    +G ++  ++ L  M  R+CKPN  TY+ L    C  G    A  
Sbjct: 1325 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEG 1384

Query: 399  IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL- 457
            +  ++  +  S     Y  +I SL +K K  +A      M     +P+  T   L+ GL 
Sbjct: 1385 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLT 1444

Query: 458  -----------CMEGLIEEALEIFVVMEEYDYK---PDVDNFNALLLGLCKSRRTDLSLE 503
                       C    +     + VV ++  +    P    +NA++  LC+      +L+
Sbjct: 1445 SCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALD 1504

Query: 504  VFQMMIEKGQMPNETTYTILVEG 526
                M +KG +PN  T+  L+ G
Sbjct: 1505 FKNRMAKKGYVPNPITFLSLLYG 1527



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 162/332 (48%), Gaps = 18/332 (5%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K+++A +  E+M  +   PDV     L+  LCK   +  A  ++E M+   + PD   Y 
Sbjct: 1203 KVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYA 1262

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++   +  N+G A ++ E ME  G   + V+ N++++G C  G +++++  +  + + 
Sbjct: 1263 TLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKV 1322

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            G +P+ FTY+ ++    K+  ++ A++ L D+I +  KPN+V+Y+ L+ G CK G T+ A
Sbjct: 1323 GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSA 1382

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               F ++ ++   PNVV+Y IL+ SL  + +   A      M     SP  VT + L+  
Sbjct: 1383 EGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 1442

Query: 318  LA----------------YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
            L                  HGK D  L V  ++V     P  ++YN II  LC    +  
Sbjct: 1443 LTSCTPCVINSICCNTSEVHGK-DALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLRE 1501

Query: 362  VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
             +   ++M  +   PN  T+  L    C VGK
Sbjct: 1502 ALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 121/290 (41%), Gaps = 32/290 (11%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R   L DA    E M  KG  PD+V    ++   C+   M +AI  M  M   G IPD  
Sbjct: 1270 RSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEF 1329

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +YT +++   K+GN+  A++ +  M       N VTY+SL+ G C  G+ + +      +
Sbjct: 1330 TYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM 1389

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              + L PN  TY+ L+ + +K+  V  A    + ++     PN V+ + L+ GL      
Sbjct: 1390 QAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL------ 1443

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM------DGGDRSPTI 308
                            P V++      S+C         + L  +      D GD  P  
Sbjct: 1444 ------------TSCTPCVIN------SICCNTSEVHGKDALLVVFKKLVFDIGD--PRN 1483

Query: 309  VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
              YN +I SL  H     AL   + M K  + P+  ++  ++   CS GK
Sbjct: 1484 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 4/282 (1%)

Query: 270  EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            +P  ++++ LLR L    R++  ++ L  M     +PT      L+ + A  G    A +
Sbjct: 869  DPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATE 928

Query: 330  VLDEMVKGRFR--PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP-NEGTYNGLAM 386
            +  E V+ ++   P     N ++  L  + + D   K  D+M  +     N  T   +  
Sbjct: 929  MC-ERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRG 987

Query: 387  LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            LC   +V+E   +I++           FY  +I   CR+G   +   LL EM   GF P 
Sbjct: 988  LCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPT 1047

Query: 447  SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
              TY SLI  L  +G +E+   +F+ M +  + P+V  +N+++  LC  R    ++ + +
Sbjct: 1048 LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILK 1107

Query: 507  MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             M   G  P+  T+  L+ G+ H+  +  +   L+E   R++
Sbjct: 1108 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL 1149


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 228/460 (49%), Gaps = 7/460 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA    + M+ +    D      L+  LC   ++++ +K++E    +G IP    Y 
Sbjct: 184 RWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYN 243

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C++G++G  + L+ +ME  G+    VTY SL+  L   G+L +       + ++
Sbjct: 244 VLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKR 303

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN   Y+ +++A  K      AM +L  + A G  P+++++N L+TGLC EG   +A
Sbjct: 304 GLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 363

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             F R+   +   PN +SY  L+   CM G    A++LL EM G   +P +VT+  LI  
Sbjct: 364 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHG 423

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   GK   AL V ++M + +  P    YN +I+ LC +  +      L++M  +  +P+
Sbjct: 424 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPD 483

Query: 378 EGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           E  Y    +G      +G  ++ F  ++  G + +         +I   C+ G   +A  
Sbjct: 484 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVS---CNAMIKGYCQFGMMSEAIL 540

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            +  M K G  PD +TY+++I G   +G +  AL     M +   KP+V  +++L+ G C
Sbjct: 541 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 600

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           K+  TD +  +F  M  +   PN  TYTIL+  +  +D++
Sbjct: 601 KTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKV 640



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 182/395 (46%), Gaps = 2/395 (0%)

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI-QKGLVPNAFTYSFLLEAAY 214
           ++ M   G         +LV      G L ++    +RL  Q G +P     + LL+   
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLV 180

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           ++R    A KL D+++ +    +  S  VL+ GLC EGR EE ++        G  P+VV
Sbjct: 181 EQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVV 240

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
            YN+L+   C  G       LL EM+     PT+VTY  LI  L   G  +    +  EM
Sbjct: 241 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 300

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
            K    P+   YN +I  LC        +  L QMF   C P+  T+N L   LC  G V
Sbjct: 301 RKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 360

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           ++A   ++    ++ +  Q  Y  +I   C +G+   A  LL EM   G TPD  T+ +L
Sbjct: 361 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGAL 420

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I GL + G + EAL +   M E    PDV+ +N L+ GLCK      +  + + M+EK  
Sbjct: 421 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNV 480

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            P+E  Y  L++G    + L  + ++ + ++ + V
Sbjct: 481 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 515



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 195/444 (43%), Gaps = 3/444 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E     G  P VV    L+   C+   M + + ++  M + G +P   +Y  L+NCL K
Sbjct: 227 IEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGK 286

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG++     L  +M   G   N   YNS++  LC   +  Q++  L ++   G  P+  T
Sbjct: 287 KGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIIT 346

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+     E  V  A   L + I +   PN +SY  L+ G C  G    A     ++ 
Sbjct: 347 FNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMM 406

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G  P+VV++  L+  L + G+  EA  +  +M      P +  YN+LI  L       
Sbjct: 407 GRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLP 466

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L+EM++   +P    Y  +I        +    K  + M H+  +P+  + N + 
Sbjct: 467 AAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMI 526

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C  G + EA   + ++  K    P EF Y  VI+   ++G    A + L +M K   
Sbjct: 527 KGYCQFGMMSEAILCMSNM-RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 585

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+  TYSSLI G C  G  + A  +F  M+     P+V  +  L+  L K  +   +  
Sbjct: 586 KPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 645

Query: 504 VFQMMIEKGQMPNETTYTILVEGI 527
            F+ M+     PN+ T   LV G+
Sbjct: 646 YFETMLLNHCSPNDVTLHYLVNGL 669



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 214/507 (42%), Gaps = 51/507 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R   +    L L  M +KG  P +V   +L+  L K   ++K   +   M   G+ 
Sbjct: 247 DGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLS 306

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  +++ LCK  +   AM ++++M   G   + +T+N+L+ GLC  G++ ++  F
Sbjct: 307 PNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHF 366

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L   I++ L PN  +Y+ L+        + AA  LL +++ +G  P++V++  L+ GL  
Sbjct: 367 LREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVV 426

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----------- 299
            G+  EA+     +  +   P+V  YN+L+  LC +     A  +L EM           
Sbjct: 427 AGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFV 486

Query: 300 -----DGGDRS-------------------PTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
                DG  RS                   P IV+ N +I      G    A+  +  M 
Sbjct: 487 YATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 546

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           K    P   +Y  +I+    +G ++  ++ L  M  R+CKPN  TY+ L    C  G   
Sbjct: 547 KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTD 606

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            A  +  ++  +  S     Y  +I SL +K K  +A      M     +P+  T   L+
Sbjct: 607 SAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLV 666

Query: 455 RGL------------CMEGLIEEALEIFVVMEEYDYK---PDVDNFNALLLGLCKSRRTD 499
            GL            C    +     + VV ++  +    P    +NA++  LC+     
Sbjct: 667 NGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLR 726

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEG 526
            +L+    M +KG +PN  T+  L+ G
Sbjct: 727 EALDFKNRMAKKGYVPNPITFLSLLYG 753



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 192/428 (44%), Gaps = 16/428 (3%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A + L++M + G  PD++    L+  LC    ++KA   +   +   + P+  SYT L++
Sbjct: 328 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 387

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C +G +  A  L+ +M   G+  + VT+ +L+ GL + G ++++L   +++ ++ + P
Sbjct: 388 GFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 447

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +   Y+ L+    K+  + AA  +L++++ K  +P+   Y  L+ G  +     +A + F
Sbjct: 448 DVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 507

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  KG  P++VS N +++  C  G   EA   ++ M      P   TY  +I   A  
Sbjct: 508 EFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 567

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G  + AL+ L +M+K + +P+  +Y+ +I   C  G  D        M      PN  TY
Sbjct: 568 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 627

Query: 382 NGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL------------CRKGKT 428
             L   L    KV  A    +++     S       Y++  L            C   + 
Sbjct: 628 TILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEV 687

Query: 429 YQAFQLLYEMTKYGFT---PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           +    LL    K  F    P +  Y+++I  LC   ++ EAL+    M +  Y P+   F
Sbjct: 688 HGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 747

Query: 486 NALLLGLC 493
            +LL G C
Sbjct: 748 LSLLYGFC 755



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 174/376 (46%), Gaps = 19/376 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M+ +GH PDVV    L++ L  A K+ +A+ V E M    + PD + Y  L++ LCK
Sbjct: 402 LMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 461

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           K  +  A  ++E+M +     +   Y +L+ G     NL  + +  + +  KG+ P+  +
Sbjct: 462 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVS 521

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            + +++   +   +  A+  + ++   G  P+  +Y  +++G  K+G    A+R+  D+ 
Sbjct: 522 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 581

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +  +PNVV+Y+ L+   C  G  + A  L A M     SP +VTY ILIGSL    K  
Sbjct: 582 KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVL 641

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A    + M+     P+  + + ++  L S         C   + +  C      +   A
Sbjct: 642 RAGLYFETMLLNHCSPNDVTLHYLVNGLTS---------CTPCVINSICCNTSEVHGKDA 692

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
           +L    K      ++  +G+ +NS+    Y  +I SLCR     +A      M K G+ P
Sbjct: 693 LLVVFKK------LVFDIGDPRNSA----YNAIIFSLCRHNMLREALDFKNRMAKKGYVP 742

Query: 446 DSYTYSSLIRGLCMEG 461
           +  T+ SL+ G C  G
Sbjct: 743 NPITFLSLLYGFCSVG 758



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 182/393 (46%), Gaps = 44/393 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A +  E+M  +   PDV     L+  LCK + +  A  ++E M+   + PD   Y 
Sbjct: 429 KVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYA 488

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++   +  N+G A ++ E ME  G   + V+ N++++G C  G +++++  +  + + 
Sbjct: 489 TLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKV 548

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+ FTY+ ++    K+  ++ A++ L D+I +  KPN+V+Y+ L+ G CK G T+ A
Sbjct: 549 GCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSA 608

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F ++ ++   PNVV+Y IL+ SL  + +   A      M     SP  VT + L+  
Sbjct: 609 EGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 668

Query: 318 LA----------------YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
           L                  HGK D  L V  ++V     P  ++YN II  LC    +  
Sbjct: 669 LTSCTPCVINSICCNTSEVHGK-DALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLRE 727

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +   ++M  +   PN  T+  L    C VGK      I+          P EF +    
Sbjct: 728 ALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTIL----------PNEFQQ---- 773

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
                    + F++++   +Y F  D Y   S+
Sbjct: 774 ---------EEFEIIF---RYKFLFDQYATESV 794



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 134/321 (41%), Gaps = 28/321 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + H L  A   LE M+ K  +PD      L+    ++  +  A K+ E M   G+ PD  
Sbjct: 461 KKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIV 520

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S   ++   C+ G +  A+  +  M   G   +  TY +++ G    GNLN +L++L  +
Sbjct: 521 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 580

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I++   PN  TYS L+    K     +A  L  ++ A+   PN+V+Y +L+  L K+ + 
Sbjct: 581 IKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKV 640

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSL------------CMEGRWEEANELLA----- 297
             A  +F  +      PN V+ + L+  L            C        + LL      
Sbjct: 641 LRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKL 700

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
             D GD  P    YN +I SL  H     AL   + M K  + P+  ++  ++   CS G
Sbjct: 701 VFDIGD--PRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 758

Query: 358 KVDLVVKCLDQMFHRRCKPNE 378
           K          M  R   PNE
Sbjct: 759 K---------SMNWRTILPNE 770



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 4/282 (1%)

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           +P  ++++ LLR L    R++  ++ L  M     +PT      L+ + A  G    A  
Sbjct: 95  DPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATD 154

Query: 330 VLDEMVK--GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC-KPNEGTYNGLAM 386
           + + + +  G   P     N ++  L  + + D   K  D+M        N  T   +  
Sbjct: 155 MCERLREQYGSL-PEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRG 213

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  G+V+E   +I++           FY  +I   CR+G   +   LL EM   GF P 
Sbjct: 214 LCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPT 273

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY SLI  L  +G +E+   +F+ M +    P+V  +N+++  LCK      ++ + +
Sbjct: 274 LVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILK 333

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            M   G  P+  T+  L+ G+ H+  +  +   L+E   R++
Sbjct: 334 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRREL 375


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 233/485 (48%), Gaps = 21/485 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   L +M   G  P+V+  T LL   C  +    A ++ EMM  +G+ PD  
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L + LCK G    A   + +    G     V Y +L+ G    GN + +   ++R+
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFIVRK---GVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +G  P+++TYS LL A  K++ ++ A+ +LD +  +G K  + +Y +L+  + +EG+ 
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 685

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A R + ++ S G +P+  +Y + + S C EGR E+A +L+ +M+    +P +VTYNIL
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG----------------K 358
           I    + G  D A   L  MV     P+  +Y  ++  L                    +
Sbjct: 746 IDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 805

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +D+  + L++M      P   TY+ L A  C  G+++EA  ++  +  K  S  ++ Y  
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C      +A   +  M++ GF P   +Y  L+ GLC EG  E+   +F  + E  
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           Y  D   +  L  GL K+   D+  ++  +M ++    +  TY  LV    H+    L +
Sbjct: 926 YNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYA-LVTNKMHEVSSSLVS 984

Query: 538 EVLKE 542
           EV +E
Sbjct: 985 EVREE 989



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 49/506 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K +DA     +M+S   K D+     L+  L K +++K+A +++  + ++G++P+  +YT
Sbjct: 407 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYT 466

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK G V  A+++++ ME  G   N  TYNSL+ GL     L++++  L ++ + 
Sbjct: 467 SIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKD 526

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++PN  TY+ LL+    E     A +L + +   G KP+  +Y VL   LCK GR EEA
Sbjct: 527 GIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 586

Query: 258 IRFF--------------------------------RDLPSKGFEPNVVSYNILLRSLCM 285
             F                                   +  +G  P+  +Y++LL +LC 
Sbjct: 587 YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           + R  EA  +L +M       TI  Y ILI  +   GK DHA ++ +EM     +PSA +
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLG 404
           Y   I   C EG+++     + +M      P+  TYN L   CG +G +  AF+ ++ + 
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQ----------------AFQLLYEMTKYGFTPDSY 448
                     Y  ++  L +    Y                  +QLL  M K+G  P   
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TYSSLI G C  G +EEA  +   M      P+ D +  L+   C ++  + +L    +M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886

Query: 509 IEKGQMPNETTYTILVEGIAHQDELE 534
            E G  P   +Y +LV G+ ++ + E
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFE 912



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 220/485 (45%), Gaps = 20/485 (4%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K  +A   L   V +G  P VV  TNL+   C A K   A+++   M+SS    D   
Sbjct: 370 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L+N L KK  +  A +L+ ++   G   N +TY S++ G C  G ++ +L+ L  + 
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PNA+TY+ L+    K++ +H AM LL  +   G  PN+++Y  LL G C E   +
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A R F  +   G +P+  +Y +L  +LC  GR EEA   +        + T V Y  LI
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLI 606

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
              +  G TD A  +++ M+     P + +Y+ ++  LC + +++  +  LDQM  R  K
Sbjct: 607 DGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIK 666

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                Y  L   +   GK   A  +   + +  +      Y   I S C++G+   A  L
Sbjct: 667 CTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDL 726

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + +M + G  PD  TY+ LI G    G I+ A      M     +P+   +  LL  L K
Sbjct: 727 ILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK 786

Query: 495 SR----------------RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
                               D++ ++ + M++ G  P  TTY+ L+ G      LE +  
Sbjct: 787 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 846

Query: 539 VLKEL 543
           +L  +
Sbjct: 847 LLDHM 851



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 224/473 (47%), Gaps = 9/473 (1%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           FL ++R    G  P+V   T L+  LCK+ ++  A  + + M  +G++P   +Y  ++  
Sbjct: 276 FLMMKR---DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 332

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K G +  A+++ E ME  G   +  TYN+L+ GLC      ++ + L+  +++G  P 
Sbjct: 333 YSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPT 391

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             T++ L+           A+++ + +++   K +L  +  L+  L K+ R +EA     
Sbjct: 392 VVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN 451

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++ + G  PNV++Y  ++   C  G+ + A E+L  M+     P   TYN L+  L    
Sbjct: 452 EISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDK 511

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K   A+ +L +M K    P+  +Y  ++   C E   D   +  + M     KP+E  Y 
Sbjct: 512 KLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYA 571

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC  G+ +EA++ I     K  +  + +Y  +I    + G T  A  L+  M   
Sbjct: 572 VLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 628

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G TPDSYTYS L+  LC +  + EAL I   M     K  +  +  L+  + +  + D +
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             ++  M   G  P+ TTYT+ +     +  LE + +++ +++ R+ V+   V
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME-REGVAPDVV 740



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 233/548 (42%), Gaps = 59/548 (10%)

Query: 42  IRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQA 101
           IR   S ++ +SPK   Y    R     + T +    +   + QL   V  G  PD V  
Sbjct: 136 IRRTGSARLALSPK--CYNFALRSLARFDMTEY----MGRVYSQL---VQDGLLPDTVTY 186

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
             ++   CK   +  A +   +++  G+ P+  +   LV   C+ G +  A  L   M  
Sbjct: 187 NTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 246

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   N  +Y  L++GLC    + ++L     + + G  PN   ++FL+    K   V  
Sbjct: 247 MGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 306

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A  L D +   G  P++++YN ++ G  K GR  +A++    +   G  P+  +YN L+ 
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR- 340
            LC + + EEA ELL        +PT+VT+  LI       K D AL++ ++M+  + + 
Sbjct: 367 GLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425

Query: 341 ----------------------------------PSAASYNPIIARLCSEGKVDLVVKCL 366
                                             P+  +Y  II   C  GKVD+ ++ L
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR 424
             M    C+PN  TYN L   L    K+ +A A++  +  K    P    Y  ++   C 
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM-QKDGIIPNVITYTTLLQGQCD 544

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF----VVMEEYDYKP 480
           +     AF+L   M + G  PD + Y+ L   LC  G  EEA        V + +  Y  
Sbjct: 545 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTT 604

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            +D F+       K+  TD +  + + MI++G  P+  TY++L+  +  Q  L  +  +L
Sbjct: 605 LIDGFS-------KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 657

Query: 541 KELQLRQV 548
            ++ LR +
Sbjct: 658 DQMSLRGI 665



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 211/483 (43%), Gaps = 34/483 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA L  + M   G  P V+    ++    K  +M  A+K+ E+M  +G  PD  +Y 
Sbjct: 303 RVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYN 362

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC +     A +L+      G+    VT+ +L+ G CM    + +L+  ++++  
Sbjct: 363 TLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSS 421

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               +   +  L+ +  K+  +  A +LL++I A G  PN+++Y  ++ G CK G+ + A
Sbjct: 422 KCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIA 481

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   + +   G +PN  +YN L+  L  + +  +A  LL +M      P ++TY  L+  
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK------------------- 358
                  D+A ++ + M +   +P   +Y  +   LC  G+                   
Sbjct: 542 QCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVY 601

Query: 359 -------------VDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLG 404
                         D     +++M    C P+  TY+  L  LC   ++ EA  I+  + 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            +        Y  +I  + R+GK   A ++  EMT  G  P + TY+  I   C EG +E
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A ++ + ME     PDV  +N L+ G       D +    + M+     PN  TY +L+
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781

Query: 525 EGI 527
           + +
Sbjct: 782 KHL 784



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 199/419 (47%), Gaps = 2/419 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           AI+ +    S+ +      Y + +  L +     Y  ++  ++   G   +TVTYN++++
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             C  G+L  + +    L++ GL P  FT + L+    +   +  A  L   +   G + 
Sbjct: 192 SYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 251

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N  SY +L+ GLC+     EA+  F  +   G  PNV ++  L+  LC  GR  +A  L 
Sbjct: 252 NEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
             M      P+++TYN +I   +  G+ + ALK+ + M K    P   +YN +I  LC +
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ 371

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            K +   + L+        P   T+  L    C   K  +A  +   + + +     + +
Sbjct: 372 -KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 430

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I SL +K +  +A +LL E++  G  P+  TY+S+I G C  G ++ ALE+  +ME 
Sbjct: 431 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 490

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
              +P+   +N+L+ GL K ++   ++ +   M + G +PN  TYT L++G   + + +
Sbjct: 491 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 16/299 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ K + A      M S GHKP     T  +   CK  +++ A  ++  M   G+ 
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 736

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR-------------- 176
           PD  +Y  L++     G +  A   +++M       N  TY  L++              
Sbjct: 737 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVD 796

Query: 177 --GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
             G+  L  L+ + Q L+R+++ GL P   TYS L+    K   +  A  LLD +  KG 
Sbjct: 797 TSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGL 856

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            PN   Y +L+   C     E+A+ F   +   GF+P + SY +L+  LC EG +E+   
Sbjct: 857 SPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKS 916

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           L  ++     +   V + IL   L   G  D   ++L  M K     S+ +Y  +  ++
Sbjct: 917 LFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKM 975



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 2/282 (0%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           + +AI+  R   S     +   YN  LRSL      E    + +++      P  VTYN 
Sbjct: 129 SADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 188

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I S    G    A +    +++G   P   + N ++   C  G++         M    
Sbjct: 189 MIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C+ NE +Y  L   LC    V+EA  +   +     S     + ++I+ LC+ G+   A 
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L   M + G  P   TY+++I G    G + +AL+I  +ME+    PD   +N L+ GL
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           C  ++T+ + E+    +++G  P   T+T L+ G    ++ +
Sbjct: 369 C-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 227/478 (47%), Gaps = 1/478 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +    L  M  KG  PDVV    L+   C+   +++A ++M+ M   G+ P   
Sbjct: 266 KNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF 325

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N LCK G    A  ++++M   G   +T TYN L+   C   N+  + +  D +
Sbjct: 326 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+VP+  ++S L+    K   +  A+K   D+   G  P+ V Y +L+ G C+ G  
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 445

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA++   ++  +G   +VV+YN +L  LC E    EA+EL  EM      P   T+  L
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 505

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  G  + A+ + + M++   +P   +YN +I   C   +++ V +  + M  RR 
Sbjct: 506 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 565

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  +Y  L    C +G V EAF +   +  K   +       ++   CR G   +A +
Sbjct: 566 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 625

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L  M   G  PD  TY++LI G   E  ++ A  +   ME     PDV  +N +L G  
Sbjct: 626 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 685

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +  R   +  +   MIE+G  P+ +TYT L+ G   Q+ L+ +  V  E+  R  V +
Sbjct: 686 RQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 213/469 (45%), Gaps = 51/469 (10%)

Query: 75  RDHKLNDAFLQLERMVSKG--HKPDVVQATNLLYDLCKAN---------------KMKKA 117
           R  +L DA   + RMV K    + ++V++  L Y  C +N               K+++ 
Sbjct: 144 RSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREG 203

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
            +   ++ S G+    ++   L+  L K G V  A ++ +++   G   N  T N ++  
Sbjct: 204 CEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 263

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           LC    +  +  FL  + +KG+ P+  TY+ L+ A  ++  +  A +L+D +  KG KP 
Sbjct: 264 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 323

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           + +YN ++ GLCK G+   A     ++   G  P+  +YNILL   C      +A  +  
Sbjct: 324 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 383

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           EM      P +V+++ LIG L+ +G  D ALK   +M      P    Y  +I   C  G
Sbjct: 384 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 443

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
            +   +K  D+M  + C  +  TYN                                   
Sbjct: 444 VMSEALKVRDEMLEQGCVLDVVTYN----------------------------------T 469

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++  LC++    +A +L  EMT+ G  PD YT+++LI G   +G + +A+ +F +M + +
Sbjct: 470 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 529

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            KPDV  +N L+ G CK    +   E++  MI +   PN  +Y IL+ G
Sbjct: 530 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 578



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 148/304 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  +++A    + M+ +G   DVV    +L  LCK   + +A ++   M   G+ PD  
Sbjct: 441 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 500

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L+N   K GN+  A+ L E M       + VTYN+L+ G C    + +  +  + +
Sbjct: 501 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 560

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I + + PN  +Y  L+        V  A +L D+++ KG +  +++ N ++ G C+ G  
Sbjct: 561 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 620

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A  F  ++  KG  P+ ++YN L+     E   + A  L+ +M+     P ++TYN++
Sbjct: 621 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 680

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+   A  ++ +M++    P  ++Y  +I    ++  +    +  D+M  R  
Sbjct: 681 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740

Query: 375 KPNE 378
            P++
Sbjct: 741 VPDD 744



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 34/273 (12%)

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N + +++L+R+     +  E  E    +       +I   N L+G L   G  D A ++ 
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG 391
            E+V+   + +  + N +I  LC   K++     L  M  +   P+  TYN L       
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL------- 295

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
                                      I + CR+G   +AF+L+  M+  G  P  +TY+
Sbjct: 296 ---------------------------INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 328

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           ++I GLC  G    A  +   M +    PD   +N LL+  C++     +  +F  M  +
Sbjct: 329 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ 388

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           G +P+  +++ L+  ++    L+ + +  ++++
Sbjct: 389 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 421


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 233/485 (48%), Gaps = 21/485 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   L +M   G  P+V+  T LL   C  +    A ++ EMM  +G+ PD  
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L + LCK G    A   + +    G     V Y +L+ G    GN + +   ++R+
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFIVRK---GVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +G  P+++TYS LL A  K++ ++ A+ +LD +  +G K  + +Y +L+  + +EG+ 
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 685

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A R + ++ S G +P+  +Y + + S C EGR E+A +L+ +M+    +P +VTYNIL
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG----------------K 358
           I    + G  D A   L  MV     P+  +Y  ++  L                    +
Sbjct: 746 IDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 805

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +D+  + L++M      P   TY+ L A  C  G+++EA  ++  +  K  S  ++ Y  
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C      +A   +  M++ GF P   +Y  L+ GLC EG  E+   +F  + E  
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           Y  D   +  L  GL K+   D+  ++  +M ++    +  TY  LV    H+    L +
Sbjct: 926 YNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYA-LVTNKMHEVSSSLVS 984

Query: 538 EVLKE 542
           EV +E
Sbjct: 985 EVREE 989



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 49/506 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K +DA     +M+S   K D+     L+  L K +++K+A +++  + ++G++P+  +YT
Sbjct: 407 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYT 466

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK G V  A+++++ ME  G   N  TYNSL+ GL     L++++  L ++ + 
Sbjct: 467 SIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKD 526

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++PN  TY+ LL+    E     A +L + +   G KP+  +Y VL   LCK GR EEA
Sbjct: 527 GIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 586

Query: 258 IRFF--------------------------------RDLPSKGFEPNVVSYNILLRSLCM 285
             F                                   +  +G  P+  +Y++LL +LC 
Sbjct: 587 YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 646

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           + R  EA  +L +M       TI  Y ILI  +   GK DHA ++ +EM     +PSA +
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLG 404
           Y   I   C EG+++     + +M      P+  TYN L   CG +G +  AF+ ++ + 
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQ----------------AFQLLYEMTKYGFTPDSY 448
                     Y  ++  L +    Y                  +QLL  M K+G  P   
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TYSSLI G C  G +EEA  +   M      P+ D +  L+   C ++  + +L    +M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886

Query: 509 IEKGQMPNETTYTILVEGIAHQDELE 534
            E G  P   +Y +LV G+ ++ + E
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFE 912



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 220/485 (45%), Gaps = 20/485 (4%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K  +A   L   V +G  P VV  TNL+   C A K   A+++   M+SS    D   
Sbjct: 370 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L+N L KK  +  A +L+ ++   G   N +TY S++ G C  G ++ +L+ L  + 
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PNA+TY+ L+    K++ +H AM LL  +   G  PN+++Y  LL G C E   +
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A R F  +   G +P+  +Y +L  +LC  GR EEA   +        + T V Y  LI
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLI 606

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
              +  G TD A  +++ M+     P + +Y+ ++  LC + +++  +  LDQM  R  K
Sbjct: 607 DGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIK 666

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                Y  L   +   GK   A  +   + +  +      Y   I S C++G+   A  L
Sbjct: 667 CTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDL 726

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + +M + G  PD  TY+ LI G    G I+ A      M     +P+   +  LL  L K
Sbjct: 727 ILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK 786

Query: 495 SR----------------RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
                               D++ ++ + M++ G  P  TTY+ L+ G      LE +  
Sbjct: 787 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 846

Query: 539 VLKEL 543
           +L  +
Sbjct: 847 LLDHM 851



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 229/489 (46%), Gaps = 41/489 (8%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           T L+  LC A  ++KA+ +  MM   G  P+  ++T+L++ LCK G VG A  L + M  
Sbjct: 257 TILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 316

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   + +TYN+++ G   LG +N +L+  + + + G  P+ +TY+ L+     ++    
Sbjct: 317 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEE 375

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A +LL++ + +G  P +V++  L+ G C   + ++A+R    + S   + ++  +  L+ 
Sbjct: 376 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 435

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           SL  + R +EA ELL E+      P ++TY  +I      GK D AL+VL  M +   +P
Sbjct: 436 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 495

Query: 342 SAASYNPIIARL-----------------------------------CSEGKVDLVVKCL 366
           +A +YN ++  L                                   C E   D   +  
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555

Query: 367 DQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           + M     KP+E  Y  L   LC  G+ +EA++ I     K  +  + +Y  +I    + 
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKA 612

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G T  A  L+  M   G TPDSYTYS L+  LC +  + EAL I   M     K  +  +
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
             L+  + +  + D +  ++  M   G  P+ TTYT+ +     +  LE + +++ +++ 
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME- 731

Query: 546 RQVVSESAV 554
           R+ V+   V
Sbjct: 732 REGVAPDVV 740



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 220/480 (45%), Gaps = 15/480 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L  A      ++  G +P+      L+   C+  +++KA  +  MM   G   +  
Sbjct: 195 KEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEY 254

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SYT L+  LC    V  A+ L   M+  G   N   +  L+ GLC  G +  +    D +
Sbjct: 255 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 314

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q G+VP+  TY+ ++    K   ++ A+K+ + +   G  P+  +YN L+ GLC + +T
Sbjct: 315 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KT 373

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA     +   +GF P VV++  L+   CM  ++++A  +  +M        +  +  L
Sbjct: 374 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKL 433

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL    +   A ++L+E+      P+  +Y  II   C  GKVD+ ++ L  M    C
Sbjct: 434 INSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 493

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
           +PN  TYN L   L    K+ +A A++  +  K    P    Y  ++   C +     AF
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKM-QKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF----VVMEEYDYKPDVDNFNAL 488
           +L   M + G  PD + Y+ L   LC  G  EEA        V + +  Y   +D F+  
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFS-- 610

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
                K+  TD +  + + MI++G  P+  TY++L+  +  Q  L  +  +L ++ LR +
Sbjct: 611 -----KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 198/417 (47%), Gaps = 2/417 (0%)

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           +V   +V  G++PD  +Y  ++   CK+G++  A +    + + G    T T N+LV G 
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGY 228

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C  G L ++      +   G   N ++Y+ L++     + V  A+ L   +   G  PN+
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNV 288

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            ++  L++GLCK GR  +A   F  +P  G  P+V++YN ++      GR  +A ++   
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M+     P   TYN LI  L    KT+ A ++L+  VK  F P+  ++  +I   C   K
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 407

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
            D  ++  ++M   +CK +   +  L   L    +++EA  ++  +           Y  
Sbjct: 408 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 467

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C+ GK   A ++L  M + G  P+++TY+SL+ GL  +  + +A+ +   M++  
Sbjct: 468 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 527

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             P+V  +  LL G C     D +  +F+MM + G  P+E  Y +L + +      E
Sbjct: 528 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 584



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 199/419 (47%), Gaps = 2/419 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           AI+ +    S+ +      Y + +  L +     Y  ++  ++   G   +TVTYN++++
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             C  G+L  + ++   L++ GL P  FT + L+    +   +  A  L   +   G + 
Sbjct: 192 SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 251

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N  SY +L+ GLC      +A+  F  +   G  PNV ++  L+  LC  GR  +A  L 
Sbjct: 252 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
             M      P+++TYN +I   +  G+ + ALK+ + M K    P   +YN +I  LC +
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ 371

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            K +   + L+        P   T+  L    C   K  +A  +   + + +     + +
Sbjct: 372 -KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 430

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I SL +K +  +A +LL E++  G  P+  TY+S+I G C  G ++ ALE+  +ME 
Sbjct: 431 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 490

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
              +P+   +N+L+ GL K ++   ++ +   M + G +PN  TYT L++G   + + +
Sbjct: 491 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 16/299 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ K + A      M S GHKP     T  +   CK  +++ A  ++  M   G+ 
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 736

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR-------------- 176
           PD  +Y  L++     G +  A   +++M       N  TY  L++              
Sbjct: 737 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVD 796

Query: 177 --GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
             G+  L  L+ + Q L+R+++ GL P   TYS L+    K   +  A  LLD +  KG 
Sbjct: 797 TSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGL 856

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            PN   Y +L+   C     E+A+ F   +   GF+P + SY +L+  LC EG +E+   
Sbjct: 857 SPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKS 916

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           L  ++     +   V + IL   L   G  D   ++L  M K     S+ +Y  +  ++
Sbjct: 917 LFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKM 975



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 2/282 (0%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           + +AI+  R   S     +   YN  LRSL      E    + +++      P  VTYN 
Sbjct: 129 SADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 188

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I S    G    A +    +++G   P   + N ++   C  G++         M    
Sbjct: 189 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C+ NE +Y  L   LC    V++A  +   +     S     + ++I+ LC+ G+   A 
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L   M + G  P   TY+++I G    G + +AL+I  +ME+    PD   +N L+ GL
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           C  ++T+ + E+    +++G  P   T+T L+ G    ++ +
Sbjct: 369 C-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 244/525 (46%), Gaps = 54/525 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K++DA   L+ M+  G K ++    +L+   CK  ++ +A  V+  MV   + 
Sbjct: 306 DGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLK 365

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD+ SY  L++  C++G+   A  L +KM   G     +TYN+L++GLC +G  + +LQ 
Sbjct: 366 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 425

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++++G+ P+   YS LL+  +K      A  L  DI+A+G   + +++N +++GLCK
Sbjct: 426 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 485

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA   F  +   G  P+ ++Y  L+   C      +A ++   M+    SP+I  
Sbjct: 486 MGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEM 545

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  L    +      +L EM      P+  +Y  +I   C EG +D   K     F
Sbjct: 546 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD---KAFSSYF 602

Query: 371 HRRCKPNEGTYNGLA---MLCG--------VGKVQEA----------------------- 396
                  E T NGL+   ++C         +G++ EA                       
Sbjct: 603 -------EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 655

Query: 397 --FAIIQSLGNKQNSSPQEF-------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
             +A IQ + +  + S + F       Y   I  LC+ GK   A +    ++  GF PD+
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           +TY +LI G    G ++EA  +   M      P++  +NAL+ GLCKS   D +  +F  
Sbjct: 716 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 775

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           + +KG  PN  TY  L++G      ++ +A  LK+  + + +S S
Sbjct: 776 LHQKGLFPNVVTYNTLIDGYCKIGNMD-AAFKLKDKMIEEGISPS 819



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 222/458 (48%), Gaps = 6/458 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A    + M   G  P +    +LL +L K  +   A  V + M+  GI+PD    + +V
Sbjct: 140 NALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 199

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N  CK G V  A   V+KME+ G   N VTY+SL+ G   LG++  +   L  + +KG+ 
Sbjct: 200 NAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVS 259

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIR 259
            N  TY+ L++   K+  +  A K+L  +  +    P+  +Y VL+ G C+ G+ ++A+R
Sbjct: 260 RNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVR 319

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              ++   G + N+   N L+   C  G   EA  ++  M   +  P   +YN L+    
Sbjct: 320 LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYC 379

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G T  A  + D+M++    P+  +YN ++  LC  G  D  ++    M  R   P+E 
Sbjct: 380 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 439

Query: 380 TYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            Y+ L  L G+ K++    A  + + +  +  +  +  +  +I+ LC+ GK  +A ++  
Sbjct: 440 GYSTL--LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 497

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M   G +PD  TY +LI G C    + +A ++   ME     P ++ +N+L+ GL KSR
Sbjct: 498 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 557

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           R     ++   M  +G  PN  TY  L++G   +  L+
Sbjct: 558 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 595



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 219/448 (48%), Gaps = 2/448 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+++A   +++M + G +P++V   +L+        ++ A  V++ M   G+  +  
Sbjct: 204 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 263

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +YT L+   CK+  +  A +++  M E+     +   Y  L+ G C  G ++ +++ LD 
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ GL  N F  + L+    K   +H A  ++  ++    KP+  SYN LL G C+EG 
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T EA      +  +G EP V++YN LL+ LC  G +++A ++   M     +P  V Y+ 
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L      + A  +  +++   F  S  ++N +I+ LC  GK+    +  D+M    
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+  TY  L    C    V +AF +  ++  +  S   E Y  +I+ L +  +  +  
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 563

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            LL EM   G TP+  TY +LI G C EG++++A   +  M E     ++   + ++ GL
Sbjct: 564 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 623

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            +  R D +  + Q M++ G  P+   +
Sbjct: 624 YRLGRIDEANLLMQKMVDHGFFPDHECF 651



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 193/445 (43%), Gaps = 33/445 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+   ++AF   ++M+ +G +P V+    LL  LC+      A+++  +M+  G+ 
Sbjct: 376 DGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVA 435

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   Y+ L++ L K  N   A  L + +   G+  + +T+N+++ GLC +G + ++ + 
Sbjct: 436 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 495

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D++   G  P+  TY  L++   K   V  A K+   +  +   P++  YN L++GL K
Sbjct: 496 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK 555

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R  E      ++  +G  PN+V+Y  L+   C EG  ++A     EM     S  I+ 
Sbjct: 556 SRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 615

Query: 311 YNILIGSLAYHGKTDHA--------------------------------LKVLDEMVKGR 338
            + ++  L   G+ D A                                   LDE  K  
Sbjct: 616 CSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF 675

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
             P+   YN  IA LC  GKVD   +    +  +   P+  TY  L       G V EAF
Sbjct: 676 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 735

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +   +  +        Y  +I  LC+     +A +L +++ + G  P+  TY++LI G 
Sbjct: 736 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 795

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDV 482
           C  G ++ A ++   M E    P +
Sbjct: 796 CKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 210/438 (47%), Gaps = 12/438 (2%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK---KGNVGYAMQLVEKMEDYGY-PTNTV 169
           +K   K++ ++    +  +  +Y   +  LCK   +GNV +  +LV    ++ + PT   
Sbjct: 68  VKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWD-ELVGVYREFAFSPT--- 123

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            ++ +++     G    +L   D + + G +P+  + + LL    K    H A  +   +
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           I  G  P++   ++++   CK+G+ +EA  F + + + G EPN+V+Y+ L+      G  
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNP 348
           E A  +L  M     S  +VTY +LI       K D A KVL  M  +    P   +Y  
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I   C  GK+D  V+ LD+M     K N    N L    C  G++ EA  +I  + +  
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD-W 362

Query: 408 NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           N  P  + Y  ++   CR+G T +AF L  +M + G  P   TY++L++GLC  G  ++A
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L+I+ +M +    PD   ++ LL GL K    + +  +++ ++ +G   +  T+  ++ G
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 482

Query: 527 IAHQDELELSAEVLKELQ 544
           +    ++  + E+  +++
Sbjct: 483 LCKMGKMVEAEEIFDKMK 500


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 238/484 (49%), Gaps = 16/484 (3%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R+   G  PD+     L+   C   +M  A  +M  ++  G  PD  ++  L+  LC  G
Sbjct: 93  RLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNG 152

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A+   + +   G+  +  +Y +L+ GLC +G    +LQ L ++  K +  N   Y+
Sbjct: 153 KVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYN 212

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            ++++  K + V  A +L   +IAK   P++V+++ L+ G C  G+ EEA   FR++  K
Sbjct: 213 TIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLK 272

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              P+  ++NIL+ +LC EG  + A  +L  M      P +VTY+ L+       + + A
Sbjct: 273 NINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKA 332

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
             VL+ + +    P+A SY  +I   C    VD  +   + M  +   P++ TYN L   
Sbjct: 333 KHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDG 392

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFT 444
           LC  G++  A+ ++  + +  N  P   + Y  +I +LC+     QA  L+ ++   G  
Sbjct: 393 LCKSGRISYAWELVDEMHD--NGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQ 450

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD YT++ LI GLC  G ++ A ++F  +    Y  +   +N ++ GLCK    D +  +
Sbjct: 451 PDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEAL 510

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
              M + G +P+  TY  L++ + H+DE E + ++L+E+  R VV           Y  E
Sbjct: 511 LSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV-----------YALE 559

Query: 565 GIEV 568
           G+E+
Sbjct: 560 GLEM 563



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 148/265 (55%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L  A   L  M+ +G  P+VV  ++L+   C  N++ KA  V+  +   G  
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A SY  ++N  CK   V  A+ L   M+  G   + VTYNSL+ GLC  G ++ + + 
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +   G   N FTY+ L++A  K   V  A+ L+  I  +G +P++ ++N+L+ GLCK
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCK 465

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR + A   F+DL SKG+  N  +YNI++  LC EG ++EA  LL++MD     P  VT
Sbjct: 466 VGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVT 525

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           Y  LI +L +  + + A K+L EM+
Sbjct: 526 YETLIQALFHKDENEKAEKLLREMI 550



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 1/309 (0%)

Query: 77  HKLN-DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           HKL  DA+    +M++K   PDVV  + L+Y  C   ++++A  +   MV   I PD  +
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  LV+ LCK+GN+  A  ++  M   G   N VTY+SL+ G C++  +N++   L+ + 
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           Q G  PNA +Y  ++    K + V  A+ L +D+  KG  P+ V+YN L+ GLCK GR  
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A     ++   G   N+ +YN L+ +LC     ++A  L+ ++      P + T+NILI
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G+  +A  V  +++   +  +A +YN ++  LC EG  D     L +M      
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGII 520

Query: 376 PNEGTYNGL 384
           P+  TY  L
Sbjct: 521 PDAVTYETL 529



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 171/376 (45%), Gaps = 34/376 (9%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A   L ++  K  K +VV    ++  LCK   +  A ++   M++  I PD  +++ L+ 
Sbjct: 192 ALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIY 251

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C  G +  A  L  +M       +  T+N LV  LC  GNL  +   L  ++++G++P
Sbjct: 252 GFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMP 311

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TYS L++       V+ A  +L+ I   G  PN  SY  ++ G CK    +EA+  F
Sbjct: 312 NVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLF 371

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            D+  KG  P+ V+YN L+  LC  GR   A EL+ EM    +   I TYN LI +L  +
Sbjct: 372 NDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKN 431

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
              D A+ ++ ++     +P   ++N +I  LC                           
Sbjct: 432 HHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCK-------------------------- 465

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
                   VG+++ A  + Q L +K  S     Y  ++  LC++G   +A  LL +M   
Sbjct: 466 --------VGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDN 517

Query: 442 GFTPDSYTYSSLIRGL 457
           G  PD+ TY +LI+ L
Sbjct: 518 GIIPDAVTYETLIQAL 533



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 121/227 (53%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++N A   L  +   G  P+      ++   CK   + +A+ +   M   GI PD  +Y
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L++ LCK G + YA +LV++M D G P N  TYN L+  LC   +++Q++  + ++  
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD 446

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G+ P+ +T++ L+    K   +  A  +  D+++KG   N  +YN+++ GLCKEG  +E
Sbjct: 447 QGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDE 506

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           A      +   G  P+ V+Y  L+++L  +   E+A +LL EM   D
Sbjct: 507 AEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARD 553


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 226/478 (47%), Gaps = 1/478 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +    L  M  KG  PDVV    L+   C+   +++A ++M+ M   G+ P   
Sbjct: 370 KNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF 429

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N LCK G    A  ++++M   G   +T TYN L+   C   N+  + +  D +
Sbjct: 430 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 489

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+VP+  ++S L+    K   +  A+K   D+   G  P+ V Y +L+ G C+ G  
Sbjct: 490 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 549

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA++   ++  +G   +VV+YN +L  LC E    EA+EL  EM      P   T+  L
Sbjct: 550 SEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 609

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G  + A+ + + M++   +P   +YN +I   C   +++ V +  + M  RR 
Sbjct: 610 INGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 669

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  +Y  L    C +G V EAF +   +  K   +       ++   CR G   +A +
Sbjct: 670 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 729

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L  M   G  PD  TY++LI G   E  ++ A  +   ME     PDV  +N +L G  
Sbjct: 730 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 789

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +  R   +  +   MIE+G  P+ +TYT L+ G   Q+ L+ +  V  E+  R  V +
Sbjct: 790 RQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 213/469 (45%), Gaps = 51/469 (10%)

Query: 75  RDHKLNDAFLQLERMVSKG--HKPDVVQATNLLYDLCKAN---------------KMKKA 117
           R  +L DA   + RMV K    + ++V++  L Y  C +N               K+++ 
Sbjct: 248 RSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREG 307

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
            +   ++ S G+    ++   L+  L K G V  A ++ +++   G   N  T N ++  
Sbjct: 308 CEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 367

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           LC    +  +  FL  + +KG+ P+  TY+ L+ A  ++  +  A +L+D +  KG KP 
Sbjct: 368 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 427

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           + +YN ++ GLCK G+   A     ++   G  P+  +YNILL   C      +A  +  
Sbjct: 428 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 487

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           EM      P +V+++ LIG L+ +G  D ALK   +M      P    Y  +I   C  G
Sbjct: 488 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 547

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
            +   +K  D+M  + C  +  TYN                                   
Sbjct: 548 VMSEALKVRDEMLEQGCXLDVVTYN----------------------------------T 573

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++  LC++    +A +L  EMT+ G  PD YT+++LI G   +G + +A+ +F +M + +
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN 633

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            KPDV  +N L+ G CK    +   E++  MI +   PN  +Y IL+ G
Sbjct: 634 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 682



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 148/304 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  +++A    + M+ +G   DVV    +L  LCK   + +A ++   M   G+ PD  
Sbjct: 545 RNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 604

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L+N   K GN+  A+ L E M       + VTYN+L+ G C    + +  +  + +
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 664

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I + + PN  +Y  L+        V  A +L D+++ KG +  +++ N ++ G C+ G  
Sbjct: 665 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 724

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A  F  ++  KG  P+ ++YN L+     E   + A  L+ +M+     P ++TYN++
Sbjct: 725 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 784

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+   A  ++ +M++    P  ++Y  +I    ++  +    +  D+M  R  
Sbjct: 785 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844

Query: 375 KPNE 378
            P++
Sbjct: 845 VPDD 848



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 34/273 (12%)

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N + +++L+R+     +  E  E    +       +I   N L+G L   G  D A ++ 
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG 391
            E+V+   + +  + N +I  LC   K++     L  M  +   P+  TYN L       
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL------- 399

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
                                      I + CR+G   +AF+L+  M+  G  P  +TY+
Sbjct: 400 ---------------------------INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 432

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           ++I GLC  G    A  +   M +    PD   +N LL+  C++     +  +F  M  +
Sbjct: 433 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ 492

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           G +P+  +++ L+  ++    L+ + +  ++++
Sbjct: 493 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 525


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 252/523 (48%), Gaps = 43/523 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLC-KANKMKKAIKVMEMMVSSGIIPDASSYT 137
           L    L   +MVSKG  PD+     +L  L  + + +  A +V  +MV  GI P   +Y 
Sbjct: 135 LEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYN 194

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK+G V  A+QL+ +M+  G   N VTYN LV GL   G L Q+ + +  +++ 
Sbjct: 195 TMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRL 254

Query: 198 GLVPNAFTYSFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           GL  +A+TY  L+   Y E+G +  A +L ++++++G  P LV+YN ++ GLCK GR  +
Sbjct: 255 GLEVSAYTYDPLIRG-YCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSD 313

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A +    + +K   P++VSYN L+      G   EA  L AE+      P++VTYN LI 
Sbjct: 314 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLID 373

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G  D A+++ DEM+K    P   ++  ++   C  G + +  +  D+M +R  +P
Sbjct: 374 GLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQP 433

Query: 377 NEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +   Y  +  + G   +G   +AF + + +  +        Y   I  L + G   +A +
Sbjct: 434 DRFAY--ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASE 491

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV---------------------- 471
           L+ +M   G  PD  TY+S+I    M G + +A  +F+                      
Sbjct: 492 LVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYA 551

Query: 472 -------------VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
                         M E    P+V  +NAL+ GLCK R+ D + + F  M  KG  PN+ 
Sbjct: 552 VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKY 611

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           TYTIL+    +    + +  + K++  R++  +S     ++++
Sbjct: 612 TYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKH 654



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 206/423 (48%), Gaps = 34/423 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L++A    E M+S+G  P +V    ++Y LCK  ++  A K++++MV+  ++PD  SY 
Sbjct: 275 QLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYN 334

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+    + GN+G A  L  ++   G   + VTYN+L+ GLC +G+L+ +++  D +I+ 
Sbjct: 335 TLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKH 394

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+ FT++ L+    K   +  A +L D+++ +G +P+  +Y   + G  K G   +A
Sbjct: 395 GPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKA 454

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ ++GF P++++YN+ +  L   G  +EA+EL+ +M      P  VTY  +I +
Sbjct: 455 FGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHA 514

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A  V  EM+     PS  +Y  +I      G++ L +    +M  +   PN
Sbjct: 515 HLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPN 574

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  I  LC+  K  QA++   E
Sbjct: 575 VITYNAL----------------------------------INGLCKVRKMDQAYKFFTE 600

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G +P+ YTY+ LI   C  G  +EAL ++  M + + +PD    +ALL  L K  +
Sbjct: 601 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK 660

Query: 498 TDL 500
           + +
Sbjct: 661 SHV 663



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 224/493 (45%), Gaps = 40/493 (8%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R RD  ++ A      MV  G +P VV    +L   CK  K+++A++++  M   G +P+
Sbjct: 165 RDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPN 224

Query: 133 ASSYTYLVNCL-----------------------------------CKKGNVGYAMQLVE 157
             +Y  LVN L                                   C+KG +  A +L E
Sbjct: 225 DVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGE 284

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           +M   G     VTYN+++ GLC  G ++ + + LD ++ K L+P+  +Y+ L+    +  
Sbjct: 285 EMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLG 344

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            +  A  L  ++  +G  P++V+YN L+ GLC+ G  + A+R   ++   G +P+V ++ 
Sbjct: 345 NIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFT 404

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY-NILIGSLAYHGKTDHALKVLDEMVK 336
           IL+R  C  G    A EL  EM      P    Y   ++G L   G    A  + +EM+ 
Sbjct: 405 ILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL-GDPSKAFGMQEEMLA 463

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--AMLCGVGKVQ 394
             F P   +YN  I  L   G +    + + +M +    P+  TY  +  A L   G ++
Sbjct: 464 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA-GHLR 522

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A A+   + +K        Y  +I S   +G+   A    +EM + G  P+  TY++LI
Sbjct: 523 KARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALI 582

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC    +++A + F  M+     P+   +  L+   C       +L +++ M+++   
Sbjct: 583 NGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQ 642

Query: 515 PNETTYTILVEGI 527
           P+  T++ L++ +
Sbjct: 643 PDSCTHSALLKHL 655



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 142/276 (51%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M+  G  PDV   T L+   CK   +  A ++ + M++ G+ PD  +Y   +    K 
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 448

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G+   A  + E+M   G+P + +TYN  + GL  LGNL ++ + + +++  GLVP+  TY
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++ A      +  A  +  ++++KG  P++V+Y VL+      GR + AI  F ++  
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG  PNV++YN L+  LC   + ++A +   EM     SP   TY ILI      G    
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQE 628

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           AL++  +M+    +P + +++ ++  L  + K  +V
Sbjct: 629 ALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVV 664



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 1/145 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SKG  P VV  T L++      ++K AI     M   G+ P+  +Y  L+N LCK   
Sbjct: 531 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A +   +M+  G   N  TY  L+   C LG+  ++L+    ++ + + P++ T+S 
Sbjct: 591 MDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSA 650

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKG 233
           LL+   K+   H  ++ L+++IA G
Sbjct: 651 LLKHLNKDYKSH-VVRHLENVIAAG 674


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 233/485 (48%), Gaps = 21/485 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   L +M   G  P+V+  T LL   C  +    A ++ EMM  +G+ PD  
Sbjct: 394 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 453

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L + LCK G    A   + +    G     V Y +L+ G    GN + +   ++R+
Sbjct: 454 AYAVLTDALCKAGRAEEAYSFIVRK---GVALTKVYYTTLIDGFSKAGNTDFAATLIERM 510

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +G  P+++TYS LL A  K++ ++ A+ +LD +  +G K  + +Y +L+  + +EG+ 
Sbjct: 511 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 570

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A R + ++ S G +P+  +Y + + S C EGR E+A +L+ +M+    +P +VTYNIL
Sbjct: 571 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 630

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG----------------K 358
           I    + G  D A   L  MV     P+  +Y  ++  L                    +
Sbjct: 631 IDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 690

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +D+  + L++M      P   TY+ L A  C  G+++EA  ++  +  K  S  ++ Y  
Sbjct: 691 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 750

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C      +A   +  M++ GF P   +Y  L+ GLC EG  E+   +F  + E  
Sbjct: 751 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 810

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           Y  D   +  L  GL K+   D+  ++  +M ++    +  TY  LV    H+    L +
Sbjct: 811 YNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYA-LVTNKMHEVSSSLVS 869

Query: 538 EVLKE 542
           EV +E
Sbjct: 870 EVREE 874



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 49/506 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K +DA     +M+S   K D+     L+  L K +++K+A +++  + ++G++P+  +YT
Sbjct: 292 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYT 351

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK G V  A+++++ ME  G   N  TYNSL+ GL     L++++  L ++ + 
Sbjct: 352 SIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKD 411

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++PN  TY+ LL+    E     A +L + +   G KP+  +Y VL   LCK GR EEA
Sbjct: 412 GIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 471

Query: 258 IRFF--------------------------------RDLPSKGFEPNVVSYNILLRSLCM 285
             F                                   +  +G  P+  +Y++LL +LC 
Sbjct: 472 YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCK 531

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           + R  EA  +L +M       TI  Y ILI  +   GK DHA ++ +EM     +PSA +
Sbjct: 532 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 591

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLG 404
           Y   I   C EG+++     + +M      P+  TYN L   CG +G +  AF+ ++ + 
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 651

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQ----------------AFQLLYEMTKYGFTPDSY 448
                     Y  ++  L +    Y                  +QLL  M K+G  P   
Sbjct: 652 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 711

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TYSSLI G C  G +EEA  +   M      P+ D +  L+   C ++  + +L    +M
Sbjct: 712 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 771

Query: 509 IEKGQMPNETTYTILVEGIAHQDELE 534
            E G  P   +Y +LV G+ ++ + E
Sbjct: 772 SECGFQPQLESYRLLVVGLCNEGDFE 797



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 220/485 (45%), Gaps = 20/485 (4%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K  +A   L   V +G  P VV  TNL+   C A K   A+++   M+SS    D   
Sbjct: 255 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 314

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L+N L KK  +  A +L+ ++   G   N +TY S++ G C  G ++ +L+ L  + 
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 374

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PNA+TY+ L+    K++ +H AM LL  +   G  PN+++Y  LL G C E   +
Sbjct: 375 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 434

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A R F  +   G +P+  +Y +L  +LC  GR EEA   +        + T V Y  LI
Sbjct: 435 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLI 491

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
              +  G TD A  +++ M+     P + +Y+ ++  LC + +++  +  LDQM  R  K
Sbjct: 492 DGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIK 551

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                Y  L   +   GK   A  +   + +  +      Y   I S C++G+   A  L
Sbjct: 552 CTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDL 611

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + +M + G  PD  TY+ LI G    G I+ A      M     +P+   +  LL  L K
Sbjct: 612 ILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK 671

Query: 495 SR----------------RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
                               D++ ++ + M++ G  P  TTY+ L+ G      LE +  
Sbjct: 672 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 731

Query: 539 VLKEL 543
           +L  +
Sbjct: 732 LLDHM 736



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 229/489 (46%), Gaps = 41/489 (8%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           T L+  LC A  ++KA+ +  MM   G  P+  ++T+L++ LCK G VG A  L + M  
Sbjct: 142 TILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 201

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   + +TYN+++ G   LG +N +L+  + + + G  P+ +TY+ L+     ++    
Sbjct: 202 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEE 260

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A +LL++ + +G  P +V++  L+ G C   + ++A+R    + S   + ++  +  L+ 
Sbjct: 261 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 320

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           SL  + R +EA ELL E+      P ++TY  +I      GK D AL+VL  M +   +P
Sbjct: 321 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 380

Query: 342 SAASYNPIIARL-----------------------------------CSEGKVDLVVKCL 366
           +A +YN ++  L                                   C E   D   +  
Sbjct: 381 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 440

Query: 367 DQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           + M     KP+E  Y  L   LC  G+ +EA++ I     K  +  + +Y  +I    + 
Sbjct: 441 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKA 497

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G T  A  L+  M   G TPDSYTYS L+  LC +  + EAL I   M     K  +  +
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
             L+  + +  + D +  ++  M   G  P+ TTYT+ +     +  LE + +++ +++ 
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME- 616

Query: 546 RQVVSESAV 554
           R+ V+   V
Sbjct: 617 REGVAPDVV 625



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 220/480 (45%), Gaps = 15/480 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L  A      ++  G +P+      L+   C+  +++KA  +  MM   G   +  
Sbjct: 80  KEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEY 139

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SYT L+  LC    V  A+ L   M+  G   N   +  L+ GLC  G +  +    D +
Sbjct: 140 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 199

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q G+VP+  TY+ ++    K   ++ A+K+ + +   G  P+  +YN L+ GLC + +T
Sbjct: 200 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KT 258

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA     +   +GF P VV++  L+   CM  ++++A  +  +M        +  +  L
Sbjct: 259 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKL 318

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL    +   A ++L+E+      P+  +Y  II   C  GKVD+ ++ L  M    C
Sbjct: 319 INSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 378

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
           +PN  TYN L   L    K+ +A A++  +  K    P    Y  ++   C +     AF
Sbjct: 379 QPNAWTYNSLMYGLVKDKKLHKAMALLTKM-QKDGIIPNVITYTTLLQGQCDEHDFDNAF 437

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF----VVMEEYDYKPDVDNFNAL 488
           +L   M + G  PD + Y+ L   LC  G  EEA        V + +  Y   +D F+  
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFS-- 495

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
                K+  TD +  + + MI++G  P+  TY++L+  +  Q  L  +  +L ++ LR +
Sbjct: 496 -----KAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 550



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 198/417 (47%), Gaps = 2/417 (0%)

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           +V   +V  G++PD  +Y  ++   CK+G++  A +    + + G    T T N+LV G 
Sbjct: 54  RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGY 113

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C  G L ++      +   G   N ++Y+ L++     + V  A+ L   +   G  PN+
Sbjct: 114 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNV 173

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            ++  L++GLCK GR  +A   F  +P  G  P+V++YN ++      GR  +A ++   
Sbjct: 174 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 233

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M+     P   TYN LI  L    KT+ A ++L+  VK  F P+  ++  +I   C   K
Sbjct: 234 MEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 292

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
            D  ++  ++M   +CK +   +  L   L    +++EA  ++  +           Y  
Sbjct: 293 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 352

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C+ GK   A ++L  M + G  P+++TY+SL+ GL  +  + +A+ +   M++  
Sbjct: 353 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 412

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             P+V  +  LL G C     D +  +F+MM + G  P+E  Y +L + +      E
Sbjct: 413 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 469



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 199/419 (47%), Gaps = 2/419 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           AI+ +    S+ +      Y + +  L +     Y  ++  ++   G   +TVTYN++++
Sbjct: 17  AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 76

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             C  G+L  + ++   L++ GL P  FT + L+    +   +  A  L   +   G + 
Sbjct: 77  SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 136

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N  SY +L+ GLC      +A+  F  +   G  PNV ++  L+  LC  GR  +A  L 
Sbjct: 137 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 196

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
             M      P+++TYN +I   +  G+ + ALK+ + M K    P   +YN +I  LC +
Sbjct: 197 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ 256

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            K +   + L+        P   T+  L    C   K  +A  +   + + +     + +
Sbjct: 257 -KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 315

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I SL +K +  +A +LL E++  G  P+  TY+S+I G C  G ++ ALE+  +ME 
Sbjct: 316 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 375

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
              +P+   +N+L+ GL K ++   ++ +   M + G +PN  TYT L++G   + + +
Sbjct: 376 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 434



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 16/299 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ K + A      M S GHKP     T  +   CK  +++ A  ++  M   G+ 
Sbjct: 562 DEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVA 621

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR-------------- 176
           PD  +Y  L++     G +  A   +++M       N  TY  L++              
Sbjct: 622 PDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVD 681

Query: 177 --GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
             G+  L  L+ + Q L+R+++ GL P   TYS L+    K   +  A  LLD +  KG 
Sbjct: 682 TSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGL 741

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            PN   Y +L+   C     E+A+ F   +   GF+P + SY +L+  LC EG +E+   
Sbjct: 742 SPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKS 801

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           L  ++     +   V + IL   L   G  D   ++L  M K     S+ +Y  +  ++
Sbjct: 802 LFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKM 860



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 2/282 (0%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           + +AI+  R   S     +   YN  LRSL      E    + +++      P  VTYN 
Sbjct: 14  SADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 73

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I S    G    A +    +++G   P   + N ++   C  G++         M    
Sbjct: 74  MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 133

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C+ NE +Y  L   LC    V++A  +   +     S     + ++I+ LC+ G+   A 
Sbjct: 134 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 193

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L   M + G  P   TY+++I G    G + +AL+I  +ME+    PD   +N L+ GL
Sbjct: 194 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 253

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           C  ++T+ + E+    +++G  P   T+T L+ G    ++ +
Sbjct: 254 C-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 294


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 244/499 (48%), Gaps = 33/499 (6%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA-NKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++A L   RM      P +V+   +L  L K  N     + +   M S G+ PD  + +
Sbjct: 47  VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 138 YLVNCLCKKGNVGYAMQLVEKM-----------------EDY----GYPTNTVTYNSLVR 176
            L+NC C  G + +A  +  K+                  D+    G+  N VTY  L+ 
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILIN 166

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           GLC +G    +LQ L ++  K +  N   YS +++   K++ V  A  L  ++I K   P
Sbjct: 167 GLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPP 226

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            +V+++ L+ G C  G+ ++A R F ++  K   P+  ++NIL+ +LC EG+ +EA  ++
Sbjct: 227 TVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVI 286

Query: 297 AEMDGGDRSPTIVTYNILIGSLAY---HGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           A M      PT+VTYN L+         GK  H L ++  M   R  P++ SYN +I   
Sbjct: 287 AVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM---RVAPNSRSYNIMINGF 343

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C    VD  +    +M  R   P++ TYN L   LC  G++  A+ ++  + N  N  P 
Sbjct: 344 CKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN--NCIPA 401

Query: 413 EFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           +   Y  +I   C+     +A  L+ ++ ++G  P+  TY+ LI GLC  G ++ A ++F
Sbjct: 402 DIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVF 461

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             +    Y  +   +N ++ GLCK    D +  +   M + G +P+  TY  +++ + H+
Sbjct: 462 QDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHK 521

Query: 531 DELELSAEVLKELQLRQVV 549
           DE E + ++L+E+ ++ VV
Sbjct: 522 DENEKAQKLLREMVIKGVV 540



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 186/381 (48%), Gaps = 1/381 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+N+A L  + +++ G   + V    L+  LCK  + + A++V+  +    +  +   Y+
Sbjct: 138 KVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYS 197

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A  L  +M     P   VT++SL+ G C++G    + +  + ++ K
Sbjct: 198 TIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMK 257

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+A+T++ L++A  KE  +  A  ++  ++ +G +P +V+YN L+ G C      +A
Sbjct: 258 NINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKA 317

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +      PN  SYNI++   C     +EA  L  EM     +P  VTYN LI  
Sbjct: 318 KHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDG 377

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+  +A +++DEM          +YN +I   C    VD  +  + ++     +PN
Sbjct: 378 LCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPN 437

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L   LC  G+++ A  + Q L  K  +     Y  +I  LC++G   +A  LL 
Sbjct: 438 MCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLS 497

Query: 437 EMTKYGFTPDSYTYSSLIRGL 457
           +M   G  PD+ TY ++I+ L
Sbjct: 498 KMEDNGIIPDAVTYETIIQAL 518



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 187/402 (46%), Gaps = 30/402 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  + DA+     M+ K   P VV  ++L+Y  C   K K A ++   MV   I PDA 
Sbjct: 205 KDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAY 264

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  LV+ LCK+G +  A  ++  M   G     VTYN+L+ G C++  + ++   L  +
Sbjct: 265 TFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSII 324

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +  + PN+ +Y+ ++    K + V  A+ L  ++  +G  P+ V+YN L+ GLCK GR 
Sbjct: 325 SRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRI 384

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A     ++ +     ++V+YN L+   C     ++A  L+ ++      P + TYNIL
Sbjct: 385 PYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNIL 444

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+  +A  V  +++   +  +A +YN +I  LC EG  D     L +M     
Sbjct: 445 IDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGI 504

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK-QNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY                 IIQ+L +K +N   Q+  + ++     KG    AF+
Sbjct: 505 IPDAVTYE---------------TIIQALFHKDENEKAQKLLREMVI----KGVVVYAFE 545

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           +    T  G T        L  G+ +  L+  ALE F   EE
Sbjct: 546 I--RRTLVGRT--------LNLGMNLISLLFSALECFSFGEE 577



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 145/265 (54%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   +  M+ +G +P VV    L+   C  N++ KA  V+ ++    + 
Sbjct: 271 DALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVA 330

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P++ SY  ++N  CK   V  A+ L  +M   G   + VTYNSL+ GLC  G +  + + 
Sbjct: 331 PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWEL 390

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +    +  +  TY+ L++   K + V  A+ L+  I   G +PN+ +YN+L+ GLCK
Sbjct: 391 VDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCK 450

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A   F+DL  KG+  N  +YNI++  LC EG ++EA  LL++M+     P  VT
Sbjct: 451 GGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVT 510

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           Y  +I +L +  + + A K+L EMV
Sbjct: 511 YETIIQALFHKDENEKAQKLLREMV 535



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 16/284 (5%)

Query: 271 PNVVSYNILLRSLC-MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           P++V +N +L  L   +  +     L  +M+     P + T +ILI    + G+   A  
Sbjct: 64  PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFS 123

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LC 388
           V  +++K                LC  GKV+  +   D +       N  TY  L   LC
Sbjct: 124 VFAKILK--------------MGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLC 169

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
            +G+ + A  +++ +  K  ++    Y  +I  LC+      A+ L  EM      P   
Sbjct: 170 KMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVV 229

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           T+SSLI G C+ G  ++A  +F  M   +  PD   FN L+  LCK  +   +  V  +M
Sbjct: 230 TFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVM 289

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           +++G  P   TY  L++G    +E+  +  VL  +   +V   S
Sbjct: 290 MKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNS 333


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 203/406 (50%), Gaps = 35/406 (8%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           MV  G+ P+  +Y  LV  LC +G +  A+ +V  M   G   N VTYN+LV   C  G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 184 LNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           L+ + + +  + ++G   PN  T++ ++    K   +  A K+ D+++ +G  P++VSYN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            LL+G CK G   E++  F ++  +G  P+VV++  L+ + C  G  E+A  L+A+M   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
                 VT+  LI      G  D AL  ++EM K   +PS   YN +I   C  G++DL 
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
            + + +M  +R KP+  TY+                                   +I+  
Sbjct: 241 RELIREMEAKRVKPDVVTYS----------------------------------TIISGY 266

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ G    AFQL  +M K G  PD+ TYSSLIRGLC E  + +A E+F  M +   +PD 
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
             +  L+ G CK    + +L +   MI KG +P+  TY++L+ G++
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 372



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 233/491 (47%), Gaps = 52/491 (10%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL--------- 139
           MV  G  P+V     L+  LC   ++++A+ V+  M  +G  P+A +Y  L         
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 140 ---------------------------VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
                                      VN LCK G +  A ++ ++M   G   + V+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           +L+ G C +G L++SL     + Q+GLVP+  T++ L+ A  K   +  A+ L+  +  +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G + N V++  L+ G CK+G  ++A+    ++   G +P+VV YN L+   C  GR + A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            EL+ EM+     P +VTY+ +I      G  D A ++  +M+K    P A +Y+ +I  
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP 411
           LC E +++   +  + M     +P+E TY  L    C  G V++A ++   +  K     
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS---------------SLIRG 456
              Y  +I  L +  +T +A +LL+++      PD+  Y                +L++G
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            CM+GL++EA +++  M + ++K D   ++ L+ G C+      +L   + M+  G  PN
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 480

Query: 517 ETTYTILVEGI 527
            T+   LV G+
Sbjct: 481 STSTISLVRGL 491



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 196/397 (49%), Gaps = 16/397 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + MV +G  PDVV    LL   CK   + +++ V   M   G++PD  ++T L++  CK
Sbjct: 104 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCK 163

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A+ LV +M + G   N VT+ +L+ G C  G L+ +L  ++ + + G+ P+   
Sbjct: 164 AGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVC 223

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K   +  A +L+ ++ AK  KP++V+Y+ +++G CK G  + A +  + + 
Sbjct: 224 YNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 283

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+ ++Y+ L+R LC E R  +A EL   M      P   TY  LI      G  +
Sbjct: 284 KKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 343

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL + DEM++    P   +Y+ +I  L    +     + L +++H    P+   Y+ L 
Sbjct: 344 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403

Query: 386 MLCG----------------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           + C                  G ++EA  + QS+ ++        Y  +I   CR G   
Sbjct: 404 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 463

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           +A     +M + GF+P+S +  SL+RGL  EG++ EA
Sbjct: 464 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 182/367 (49%), Gaps = 6/367 (1%)

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ G+ PN +TY+ L+ A      +  A+ ++ D+   G  PN V+YN L+   C+ G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 254 TEEAIRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
            + A R    +  +G  +PN+V++N ++  LC  GR E A ++  EM     +P +V+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+      G    +L V  EM +    P   ++  +I   C  G ++  V  + QM  R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
             + NE T+  L    C  G + +A   ++ +           Y  +I   C+ G+   A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L+ EM      PD  TYS++I G C  G ++ A ++   M +    PD   +++L+ G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE----LSAEVLKELQLRQ 547
           LC+ +R + + E+F+ M++ G  P+E TYT L++G   +  +E    L  E++++  L  
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 548 VVSESAV 554
           VV+ S +
Sbjct: 361 VVTYSVL 367



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 114/270 (42%), Gaps = 22/270 (8%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + +LNDA    E M+  G +PD    T L+   CK   ++KA+ + + M+  G++PD  +
Sbjct: 304 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 363

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y+ L+N L K      A +L+ K+       + + Y++L+   C        +  L    
Sbjct: 364 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML-CCSKAEFKSVVALLKGFC 422

Query: 196 QKGLVPNA-FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            KGL+  A   Y  +L+  +K          LD  +          Y++L+ G C+ G  
Sbjct: 423 MKGLMKEADKVYQSMLDRNWK----------LDGSV----------YSILIHGHCRGGNV 462

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+ F + +   GF PN  S   L+R L  EG   EA+  + ++              L
Sbjct: 463 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 522

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
           I      G  D  + VL  M +    PS+ 
Sbjct: 523 IDLNRKEGNVDALIDVLCGMARDGLLPSSG 552


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 240/509 (47%), Gaps = 42/509 (8%)

Query: 79  LNDAFLQLERMVS-KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           L+DA      ++    H P + +   +L  L K N  K AI   + M   GI P+  ++ 
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+NC      + +A  +V K+   GY  +TVT N+L+RGLC+ G + ++L F D +I+K
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG---GKPNLVSYNVLLTGLCKEGRT 254
               +  +Y  L+    K     AA++LL  I  +G    +P+++ Y  ++   CK+   
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLV 210

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A   + ++  K   PNVV++N L+   C+ G+ +EA  LL EM   + +P + T+NIL
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270

Query: 315 IGSLAYHGKTDHALKVLDEMVK---------------GRF-------------------- 339
           I  L   G+   A  VL  M+K               G F                    
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
            P+  SY+ +I  LC    VD  VK   +M  +   PN  TY+ L   LC  G++ + + 
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +I  + N+   +    Y  ++  LC+  +  +A  LL +M   G  PD  TY++L+ GLC
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G +++A  I+  +    Y  ++  +  ++ GLCK    D +L +   M + G MP+  
Sbjct: 451 KNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAV 510

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQ 547
           TY  L+  +   ++   + ++L+E+  R+
Sbjct: 511 TYETLISALFKNNKNGKAVKLLREMIARE 539



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 200/419 (47%), Gaps = 41/419 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +LN AF  + +++  G++PD V    LL  LC   K+K+A+   + ++      D  SY 
Sbjct: 103 QLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYG 162

Query: 138 YLVNCLCKKGNVGYAMQLVEKMED------------------------------YG---- 163
            L+N LCK G    A+QL+ K+E                               Y     
Sbjct: 163 TLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIV 222

Query: 164 ---YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
              YP N VT+NSL+ G C++G L +++  L+ +    + PN +T++ L++   KE  V 
Sbjct: 223 KKIYP-NVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVK 281

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A  +L  +I +G +PN+V+Y  L+ G        +A   F  +  +G  PNV SY++++
Sbjct: 282 KATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMI 341

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC     +EA +L  EM   + +P  VTY+ LI  L   G+      ++DE +  R +
Sbjct: 342 NGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDE-INNRGQ 400

Query: 341 PS-AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
           P+   +YN ++  LC   +VD  +  L +M     +P+  TY  L   LC  G++++A  
Sbjct: 401 PANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQR 460

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           I Q L  K        Y  +I  LC++G   +A  LL +M   G  PD+ TY +LI  L
Sbjct: 461 IYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 159/314 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  + DA+     M+ K   P+VV   +L+Y  C   ++K+A+ ++  M  + + 
Sbjct: 202 DSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVN 261

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L++ LCK+G V  A  ++  M   G   N VTY SL+ G  ++  +N++   
Sbjct: 262 PNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHV 321

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +  +G+ PN  +YS ++    K + V  A+KL  ++  K   PN V+Y+ L+ GLCK
Sbjct: 322 FNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCK 381

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  +      ++ ++G   N+++YN LL  LC   + ++A  LL +M      P + T
Sbjct: 382 SGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMST 441

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+  L  +G+   A ++  +++   +  +   Y  +I  LC EG  D  +  L QM 
Sbjct: 442 YTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQME 501

Query: 371 HRRCKPNEGTYNGL 384
              C P+  TY  L
Sbjct: 502 DNGCMPDAVTYETL 515



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 151/320 (47%), Gaps = 2/320 (0%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P +  +N +L+ L K    + AI F + +  KG +P + ++NIL+       +   A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           +A++      P  VT N L+  L  +GK   AL   D +++ RF     SY  +I  LC 
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 356 EGKVDLVVKCLDQMFHRR-CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            G+    ++ L ++      +P+   Y  +    C    V +A+ +   +  K+      
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            +  +I   C  G+  +A  LL EM+     P+ YT++ LI GLC EG +++A  +  VM
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            +   +P+V  + +L+ G    +  + +  VF  +  +G  PN  +Y++++ G+     +
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 534 ELSAEVLKELQLRQVVSESA 553
           + + ++ KE+ L+ +   + 
Sbjct: 351 DEAVKLFKEMHLKNMTPNTV 370



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 90/155 (58%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++D +  ++ + ++G   +++   +LL  LCK +++ KAI ++  M   GI PD S+YT
Sbjct: 384 RISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYT 443

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV+ LCK G +  A ++ + +   GYP N   Y  ++ GLC  G  +++L  L ++   
Sbjct: 444 TLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDN 503

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           G +P+A TY  L+ A +K      A+KLL ++IA+
Sbjct: 504 GCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 68/123 (55%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++H+++ A   L +M  +G +PD+   T L+  LCK  ++K A ++ + ++  G   +  
Sbjct: 416 KNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIR 475

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT ++N LCK+G    A+ L+ +MED G   + VTY +L+  L       ++++ L  +
Sbjct: 476 MYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535

Query: 195 IQK 197
           I +
Sbjct: 536 IAR 538


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 232/451 (51%), Gaps = 21/451 (4%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD+V    ++  LCK  +++KA+ ++  M  S   P++ +Y  L++ LCK+G V  AM+L
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + +M+  G   + V Y++L+ G C  G L++     D +++KG+ PN   YS L+    K
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +     A  +L  +  +G +P++ +Y  ++ GLCK+GR  +A+  F  +  KG EP+ V+
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN+L+  LC EG   +A ++   M    +   +V+YN LI  L  +GK D A+K+   ++
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 336 K-GRF-RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL---AMLCG- 389
           + G +  P   ++N +I  LC EG++D  V+  D M  R      G++  L    +L G 
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER------GSFGNLFTCHILIGE 301

Query: 390 ------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
                 + K  E +  +  LG   +S+    Y  +I   C+      A  L   M   G 
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTT---YSVMIDGFCKMHMLNFAKGLFSRMKISGL 358

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           +P  + Y++L+  LC E  +E+A  +F  M+E + +PD  +FN ++ G  K+     + E
Sbjct: 359 SPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKE 418

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +   M + G  P+  TY+  +  ++   ++E
Sbjct: 419 LLNDMQQMGLTPDAYTYSSFINRLSKLGQME 449



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 207/419 (49%), Gaps = 3/419 (0%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           I+PD  SY  ++N LCK+  +  A+ L+ +ME      N+ TY  L+ GLC  G + +++
Sbjct: 6   ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           + L  + +KGL  +   YS L+     +  +     L D+++ KG  PN+V Y+ L+ G 
Sbjct: 66  RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CK+G   EA      +  +G +P+V +Y  ++  LC +GR  +A +L   M      P+ 
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VTYN+LI  L   G    A K+ + M++   R    SYN +I  LC+ GK+D  +K    
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245

Query: 369 MFH--RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           +       +P+  T+N +   LC  G++ +A  I  ++  + +         +I    + 
Sbjct: 246 LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKS 305

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A +L   + K G  P S TYS +I G C   ++  A  +F  M+     P + ++
Sbjct: 306 GIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDY 365

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           N L+  LCK    + +  +FQ M E    P+  ++ I+++G     ++  + E+L ++Q
Sbjct: 366 NTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ 424



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 213/465 (45%), Gaps = 42/465 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ ++ +A   L  M  KG + DVV  + L+   C    + +   + + M+  GI 
Sbjct: 53  DGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGIS 112

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y+ L+N  CKKG    A  ++  M + G   +  TY  ++ GLC  G   ++L  
Sbjct: 113 PNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDL 172

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D + +KG  P+  TY+ L+    KE  +  A K+ + ++ KG +  +VSYN L+ GLC 
Sbjct: 173 FDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCN 232

Query: 251 EGRTEEAIRFFRDLPSKG--FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            G+ +EA++ F  L   G   EP+V+++N +++ LC EGR ++A E+   M        +
Sbjct: 233 NGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNL 292

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEM---------------------------VKGRFR- 340
            T +ILIG     G  D A+++   +                            KG F  
Sbjct: 293 FTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSR 352

Query: 341 -------PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
                  P+   YN ++A LC E  ++   +   +M    C+P+  ++N   M+ G  K 
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFN--IMIDGTLKA 410

Query: 394 QEAFAIIQSLGNKQNS--SPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
            +  +  + L + Q    +P  + Y   I  L + G+  +A      M   G TPD++ Y
Sbjct: 411 GDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVY 470

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            SLI+G  +   IEE + +   M +     D++  N++L  LC S
Sbjct: 471 DSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNS 515



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 5/227 (2%)

Query: 81  DAFLQLERMVSK-GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D  ++L + V K G  P     + ++   CK + +  A  +   M  SG+ P    Y  L
Sbjct: 309 DKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTL 368

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LCK+ ++  A +L ++M++     +T+++N ++ G    G+++ + + L+ + Q GL
Sbjct: 369 MASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGL 428

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+A+TYS  +    K   +  A    D +IA G  P+   Y+ L+ G       EE I 
Sbjct: 429 TPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVIN 488

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL----AEMDGG 302
             R +   G   ++   N +L  LC         ELL    +E  GG
Sbjct: 489 LLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGG 535



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I  LC++ +  +A  LL EM      P+S+TY  L+ GLC EG +EEA+ +   M+
Sbjct: 13  YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMK 72

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               + DV  ++ L+ G C     D    +F  M+EKG  PN   Y+ L+ G   +    
Sbjct: 73  RKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWR 132

Query: 535 LSAEVLKELQLRQV 548
            +  VL  +  R +
Sbjct: 133 EATAVLHTMTERGI 146



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 88/204 (43%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H LN A     RM   G  P +     L+  LCK + +++A ++ + M  S   PD  S+
Sbjct: 341 HMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +++   K G++  A +L+  M+  G   +  TY+S +  L  LG + ++    D +I 
Sbjct: 401 NIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIA 460

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+ P+   Y  L++       +   + LL  +   G   +L   N +LT LC       
Sbjct: 461 SGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLH 520

Query: 257 AIRFFRDLPSKGFEPNVVSYNILL 280
            +    +  S+      +S + LL
Sbjct: 521 VMELLPNFSSESSGGTSISCDKLL 544



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 1/117 (0%)

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M +    PD  +Y+++I GLC E  +E+A+++ V ME    +P+   +  L+ GLCK  R
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            + ++ +   M  KG   +   Y+ L+ G   +  L+    +  E+ L + +S + V
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM-LEKGISPNVV 116


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 243/504 (48%), Gaps = 28/504 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKK--AIKVMEMMVSSG 128
           ++ H D  ++DA     RM+     P +++   +L  L K+N      AI +   +  + 
Sbjct: 21  NSNHVD--VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNA 78

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           I P   ++  ++NC C  G + +A  ++ K+   GY  +T+T  +L++GLC+ G ++++L
Sbjct: 79  ITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEAL 138

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
            F D +I +G   N  +Y  L+    K     AA+++L  I  K    N+V Y+ ++  L
Sbjct: 139 HFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSL 198

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CKE    EA   +  +  K   P+VV+++ L+   CM G+++EA  L  EM   + +P +
Sbjct: 199 CKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDV 258

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMV-----------------KGRFRPSAASYNPIIA 351
            T+NIL+ +L   G T     VL  M+                 K R  P   SY  II 
Sbjct: 259 CTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIK 318

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCK---PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQ 407
           RLC    VD  +   ++M   RCK   P++ TY+ L   LC   ++  A+ ++  +  + 
Sbjct: 319 RLCKIKMVDEALSLFNEM---RCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARG 375

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             +    Y   + +LC+  +  +A  L+ ++   G  P+  TY+ LI GLC EG  E A 
Sbjct: 376 QPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQ 435

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            IF  +    YK  V  +N ++ GLC     D ++ + + M + G  P+  TY  ++  +
Sbjct: 436 VIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRAL 495

Query: 528 AHQDELELSAEVLKELQLRQVVSE 551
              DE   + ++L+E+  R ++ E
Sbjct: 496 FKNDENHKAEKLLREMIARGLLEE 519



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 200/427 (46%), Gaps = 36/427 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ AF  L +++  G+ PD +  T L+  LC   K+ +A+   + +++ G   +  SY 
Sbjct: 98  EMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYG 157

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK G    A+Q++ K++     TN V Y++++  LC    + ++ +   ++I K
Sbjct: 158 ILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVK 217

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE- 256
            + P+  T+S L+           A  L  +++     P++ ++N+L+  LCKEG T+E 
Sbjct: 218 KVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKET 277

Query: 257 ----------------AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
                           A   F  +  +   P+V SY I+++ LC     +EA  L  EM 
Sbjct: 278 KNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMR 337

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS-AASYNPIIARLCSEGKV 359
               +P  VTY+ LI  L    +  HA ++LD+M   R +P+   +Y   +  LC   +V
Sbjct: 338 CKGITPDKVTYSSLIDGLCKSERISHAWELLDQM-HARGQPADVITYTSFLHALCKNHQV 396

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D  V  + ++  +  +PN  TYN L   LC  G+ + A  I Q L  K        Y  +
Sbjct: 397 DKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIM 456

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL----------------CMEGL 462
           I  LC +G   +A  LL +M   G TPD  TY ++IR L                   GL
Sbjct: 457 INGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516

Query: 463 IEEALEI 469
           +EE +EI
Sbjct: 517 LEEKVEI 523


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 230/476 (48%), Gaps = 2/476 (0%)

Query: 81  DAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D  L+L+R M +KG  PD      L+   C+  +  +   +++ M + G+ PD  +YT L
Sbjct: 284 DEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTAL 343

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N   K+ ++G A Q+ E+M       NT TY +L+ GLC +G+L ++      +   G+
Sbjct: 344 INGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGI 403

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ L+E  YK + +  A +LL +I  +    N      ++ GLC  G    A  
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F+++ S G +PN+V Y  +++ L  EGR+EEA ++L  M     SP +  YN +I    
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             GK +     L EM+    +P+  +Y   I   C  G++    +   +M      PN+ 
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
               L    C  G   +AFA  + + ++      + +  +I  L + GK  +A  +  E+
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  PD +TY+SLI  LC EG ++ A E+   M +    P++  +NAL+ GLCK    
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             + E+F  + EKG   N  TY+ ++ G      L  + ++   ++L  V  +S V
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFV 759



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 251/556 (45%), Gaps = 46/556 (8%)

Query: 36  SLNKGFIRVLASTQVTISPKDSVYT---KPNRKPGN---NNDTRHRDHKLNDAFLQLERM 89
           +L  GF R   ST+   S  D +YT   KP+        N   +  D  +  AF   E M
Sbjct: 307 TLIDGFCRQKRSTEGK-SMLDEMYTMGLKPDHVAYTALINGFVKQSD--IGGAFQVKEEM 363

Query: 90  VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
            ++  K +      L++ LCK   ++KA  +   M   GI PD  +Y  L+    K  N+
Sbjct: 364 FARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNM 423

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             A +L+ +++      N     ++V GLC  G+L ++ +    +I  GL PN   Y+ +
Sbjct: 424 EKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTI 483

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           ++   KE     A+K+L  +  +G  P++  YN ++ G CK G+ EE   +  ++ +KG 
Sbjct: 484 VKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGL 543

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEM----------------DG----GDRS---- 305
           +PNV +Y   +   C  G  + A     EM                DG    G+ +    
Sbjct: 544 KPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFA 603

Query: 306 -----------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
                      P + T+++LI  L+ +GK   A+ V  E++     P   +Y  +I+ LC
Sbjct: 604 KFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLC 663

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            EG +    +  D M  +   PN  TYN L   LC +G++ +A  +   +  K  +    
Sbjct: 664 KEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSV 723

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I   C+     +AFQL + M   G  PDS+ Y +LI G C  G  E+AL +F+ M
Sbjct: 724 TYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGM 783

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            E +       FNAL+ G  K  +   + ++ + M++    PN  TYTIL+E       +
Sbjct: 784 VE-EGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNI 842

Query: 534 ELSAEVLKELQLRQVV 549
           + + ++  E+Q R V+
Sbjct: 843 KEAEQLFMEMQKRNVM 858



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 220/447 (49%), Gaps = 4/447 (0%)

Query: 107 DLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT 166
           DL K N+++   KV + M+ + I+PD  +YT L+N  C+ G V     ++  ME+ G   
Sbjct: 207 DLLKGNRVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIP 265

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N VTY+ ++ GLC  G+++++L+    +  KGL+P+ + Y+ L++   +++       +L
Sbjct: 266 NLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSML 325

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           D++   G KP+ V+Y  L+ G  K+     A +   ++ ++  + N  +Y  L+  LC  
Sbjct: 326 DEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKI 385

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G  E+A +L +EM      P I TYN LI         + A ++L E+ K     +A   
Sbjct: 386 GDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMC 445

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN 405
             I+  LC  G +    +   +M     KPN   Y  +   L   G+ +EA  I+  + +
Sbjct: 446 GAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKD 505

Query: 406 KQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            Q  SP  F Y  VI   C+ GK  +    L EM   G  P+ YTY + I G C  G ++
Sbjct: 506 -QGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQ 564

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            A   F+ M +    P+      L+ G CK   T  +   F+ M+++G +P+  T+++L+
Sbjct: 565 AAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLI 624

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSE 551
            G++   +L+ +  V  EL  + +V +
Sbjct: 625 HGLSKNGKLQEAMGVFSELLDKGLVPD 651



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 208/481 (43%), Gaps = 36/481 (7%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDV   TNL+   C+  K+++   V+  M   G IP+  +Y+ ++  LC+ G+V  A++L
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
              M + G   +   Y +L+ G C      +    LD +   GL P+   Y+ L+    K
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +  +  A ++ +++ A+  K N  +Y  L+ GLCK G  E+A   F ++   G +P++ +
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 276 YNILLR-----------------------------------SLCMEGRWEEANELLAEMD 300
           YN L+                                     LC  G    ANEL  EM 
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P IV Y  ++  L   G+ + A+K+L  M      P    YN +I   C  GK++
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                L +M  +  KPN  TY       C  G++Q A      + +   +        +I
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              C+ G T +AF     M   G  PD  T+S LI GL   G ++EA+ +F  + +    
Sbjct: 590 DGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLV 649

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           PDV  + +L+  LCK      + E+   M +KG  PN  TY  L+ G+    E+  + E+
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709

Query: 540 L 540
            
Sbjct: 710 F 710



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 204/459 (44%), Gaps = 35/459 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M++KG KP+V      ++  C+A +M+ A +    M+ SGI P+    T L++  CK
Sbjct: 535 LVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN   A      M D G   +  T++ L+ GL   G L +++     L+ KGLVP+ FT
Sbjct: 595 DGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    KE  + AA +L DD+  KG  PN+V+YN L+ GLCK G   +A   F  +P
Sbjct: 655 YTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIP 714

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG   N V+Y+ ++   C      EA +L   M      P    Y  LI      G T+
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL +   MV+     S  ++N +I                D  F               
Sbjct: 775 KALSLFLGMVEEGI-ASTPAFNALI----------------DGFFK-------------- 803

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
               +GK+ EA+ +++ + +   +     Y  +I   C  G   +A QL  EM K    P
Sbjct: 804 ----LGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMP 859

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TY+SL+ G    G   E   +F  M     KPD   ++ ++    K      +L++ 
Sbjct: 860 NVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLV 919

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             M+ +G    +  YTIL++ +   + L    +VL E++
Sbjct: 920 DDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVE 958



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 207/458 (45%), Gaps = 37/458 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +  +A   L  M  +G  PDV     ++   CKA KM++    +  M++ G+ P+  
Sbjct: 489 KEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVY 548

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y   ++  C+ G +  A +   +M D G   N V    L+ G C  GN  ++      +
Sbjct: 549 TYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCM 608

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G++P+  T+S L+    K   +  AM +  +++ KG  P++ +Y  L++ LCKEG  
Sbjct: 609 LDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL 668

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A     D+  KG  PN+V+YN L+  LC  G   +A EL   +     +   VTY+ +
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           A ++   M      P +  Y  +I   C  G                 
Sbjct: 729 IAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGN---------------- 772

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                T   L++   +G V+E  A          S+P   +  +I    + GK  +A+QL
Sbjct: 773 -----TEKALSLF--LGMVEEGIA----------STPA--FNALIDGFFKLGKLIEAYQL 813

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + +M     TP+  TY+ LI   C  G I+EA ++F+ M++ +  P+V  + +LL G  +
Sbjct: 814 VEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNR 873

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
             R      +F  M+ +G  P++  ++++V+  AH  E
Sbjct: 874 IGRRSEMFSLFDEMVARGIKPDDLAWSVMVD--AHLKE 909



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 242/583 (41%), Gaps = 87/583 (14%)

Query: 33  HSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKL----------NDA 82
           H F    G  R L ST  T S K + ++        N DT   D+ +          N  
Sbjct: 6   HFFKNQNGKSRTLISTLRTHSIKSNSFS-------TNADTNQSDNTVKEITSLLKQKNWQ 58

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKM--KKAIKVMEMMVSSGII--PDASSYTY 138
           FL     +     PDVV      + + K N++   K +      V+S  +   + S+++ 
Sbjct: 59  FLIESSPLPNKLNPDVV------FLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSI 112

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDY------------------------------------ 162
           L   LC  G  G A  ++E+M D                                     
Sbjct: 113 LSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDI 172

Query: 163 ----GYPTNTVTY------NSLVRGLCMLGNLNQSLQFLDRL-----IQKGL----VPNA 203
               G+    V+       N  + GL    +L++ L   +R+     + KG+    VP+ 
Sbjct: 173 YRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDV 232

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           +TY+ L+ A  +   V     +L D+  KG  PNLV+Y+V++ GLC+ G  +EA+   R 
Sbjct: 233 YTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRS 292

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + +KG  P+   Y  L+   C + R  E   +L EM      P  V Y  LI        
Sbjct: 293 MANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSD 352

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              A +V +EM   + + +  +Y  +I  LC  G ++       +M     KP+  TYN 
Sbjct: 353 IGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYN- 411

Query: 384 LAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             ++ G  KVQ   +A+ ++  +  +  ++       ++  LC  G   +A +L  EM  
Sbjct: 412 -CLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMIS 470

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
           +G  P+   Y+++++GL  EG  EEA++I  VM++    PDV  +N +++G CK+ + + 
Sbjct: 471 WGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEE 530

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                  MI KG  PN  TY   + G     E++ +     E+
Sbjct: 531 GKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEM 573



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 139/278 (50%), Gaps = 1/278 (0%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           KG   + V  + ++   CK+  + +A ++   M   G+ PD+  Y  L++  CK GN   
Sbjct: 716 KGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK 775

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A+ L   M + G  + T  +N+L+ G   LG L ++ Q ++ ++   + PN  TY+ L+E
Sbjct: 776 ALSLFLGMVEEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIE 834

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
                  +  A +L  ++  +   PN+++Y  LL G  + GR  E    F ++ ++G +P
Sbjct: 835 YHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP 894

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           + +++++++ +   EG W +A +L+ +M     +     Y ILI +L  H      LKVL
Sbjct: 895 DDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVL 954

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           DE+ K   + S A+   ++      G+ D  ++ L+ M
Sbjct: 955 DEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 3/263 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   L +AF     M   G  PD      L+   CKA   +KA+ +   MV  GI     
Sbjct: 734 KSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTP 792

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++   K G +  A QLVE M D     N VTY  L+   C +GN+ ++ Q    +
Sbjct: 793 AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEM 852

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAM-KLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            ++ ++PN  TY+ LL   Y   G  + M  L D+++A+G KP+ ++++V++    KEG 
Sbjct: 853 QKRNVMPNVLTYTSLLHG-YNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGN 911

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +A++   D+ S+G       Y IL+ +LC      E  ++L E++      ++ T   
Sbjct: 912 WIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGT 971

Query: 314 LIGSLAYHGKTDHALKVLDEMVK 336
           L+      G+TD AL+VL+ MV+
Sbjct: 972 LVCCFHRAGRTDEALRVLESMVR 994



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 1/217 (0%)

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQE 395
           G   P   +Y  +I   C  GKV+     L  M  + C PN  TY+  +A LC  G V E
Sbjct: 226 GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDE 285

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  + +S+ NK        Y  +I   CR+ ++ +   +L EM   G  PD   Y++LI 
Sbjct: 286 ALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALIN 345

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G   +  I  A ++   M     K +   + AL+ GLCK    + + ++F  M   G  P
Sbjct: 346 GFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKP 405

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           +  TY  L+EG      +E + E+L E++   + + +
Sbjct: 406 DIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANA 442



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 69/126 (54%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           +R  + ++ F   + MV++G KPD +  + ++    K     KA+K+++ M+S G+    
Sbjct: 872 NRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCK 931

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           + YT L++ LCK  N+   +++++++E  G   +  T  +LV      G  +++L+ L+ 
Sbjct: 932 NLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLES 991

Query: 194 LIQKGL 199
           +++  L
Sbjct: 992 MVRSFL 997


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 227/478 (47%), Gaps = 1/478 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +    L  M  KG  PDVV    L+   C+   +++A ++M+ M   G+ P   
Sbjct: 109 KNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF 168

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N LCK G    A  ++++M   G   +T TYN L+   C   N+  + +  D +
Sbjct: 169 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 228

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+VP+  ++S L+    K   +  A+K   D+   G  P+ V Y +L+ G C+ G  
Sbjct: 229 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA++   ++  +G   +VV+YN +L  LC E    EA+EL  EM      P   T+  L
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 348

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  G  + A+ + + M++   +P   +YN +I   C   +++ V +  + M  RR 
Sbjct: 349 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 408

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  +Y  L    C +G V EAF +   +  K   +       ++   CR G   +A +
Sbjct: 409 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 468

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L  M   G  PD  TY++LI G   E  ++ A  +   ME     PDV  +N +L G  
Sbjct: 469 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 528

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +  R   +  +   MIE+G  P+ +TYT L+ G   Q+ L+ +  V  E+  R  V +
Sbjct: 529 RQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 199/428 (46%), Gaps = 39/428 (9%)

Query: 104 LLYDL-----CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           L++DL      +A K+++  +   ++ S G+    ++   L+  L K G V  A ++ ++
Sbjct: 28  LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           +   G   N  T N ++  LC    +  +  FL  + +KG+ P+  TY+ L+ A  ++  
Sbjct: 88  VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           +  A +L+D +  KG KP + +YN ++ GLCK G+   A     ++   G  P+  +YNI
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           LL   C      +A  +  EM      P +V+++ LIG L+ +G  D ALK   +M    
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFA 398
             P    Y  +I   C  G +   +K  D+M  + C  +  TYN                
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN---------------- 311

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
                              ++  LC++    +A +L  EMT+ G  PD YT+++LI G  
Sbjct: 312 ------------------TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYS 353

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            +G + +A+ +F +M + + KPDV  +N L+ G CK    +   E++  MI +   PN  
Sbjct: 354 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 413

Query: 519 TYTILVEG 526
           +Y IL+ G
Sbjct: 414 SYGILING 421



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 185/384 (48%), Gaps = 1/384 (0%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           +N + ++ LVR       L +  +    L  KGL  +    + LL    K   V  A ++
Sbjct: 25  SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 84

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
             +++  G + N+ + N+++  LCK  + E    F  D+  KG  P+VV+YN L+ + C 
Sbjct: 85  YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 144

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +G  EEA EL+  M G    P + TYN +I  L   GK   A  VLDEM+K    P  A+
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG 404
           YN ++   C    +    +  D+M  +   P+  +++ L  +L   G + +A    + + 
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 264

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           N   +     Y  +I   CR G   +A ++  EM + G   D  TY++++ GLC E ++ 
Sbjct: 265 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLS 324

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA E+F  M E    PD   F  L+ G  K    + ++ +F+MMI++   P+  TY  L+
Sbjct: 325 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLI 384

Query: 525 EGIAHQDELELSAEVLKELQLRQV 548
           +G     E+E   E+  ++  R++
Sbjct: 385 DGFCKGSEMEKVNELWNDMISRRI 408



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 148/304 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  +++A    + M+ +G   DVV    +L  LCK   + +A ++   M   G+ PD  
Sbjct: 284 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 343

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L+N   K GN+  A+ L E M       + VTYN+L+ G C    + +  +  + +
Sbjct: 344 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 403

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I + + PN  +Y  L+        V  A +L D+++ KG +  +++ N ++ G C+ G  
Sbjct: 404 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 463

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A  F  ++  KG  P+ ++YN L+     E   + A  L+ +M+     P ++TYN++
Sbjct: 464 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 523

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+   A  ++ +M++    P  ++Y  +I    ++  +    +  D+M  R  
Sbjct: 524 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 583

Query: 375 KPNE 378
            P++
Sbjct: 584 VPDD 587


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 226/450 (50%), Gaps = 4/450 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTY 138
           DA    + ++ +G  PDV     LL  LC  N+ ++A++++ +M   G    PD  SY+ 
Sbjct: 35  DARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N   K+G++        +M D     N VTYNS++  LC    ++++++ L  +++ G
Sbjct: 94  VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++P+  TY+ ++           A+  L  + + G +P++V+YN L+  LCK GR  EA 
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           + F  +  +G +P + +Y  LL+    +G   E + LL  M      P    ++IL+ + 
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
           A   K + A+ V  +M +    P+A +Y  +I  LC  G+V+  +   +QM      P  
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             YN L   LC   K + A  +I  + ++       F+  +I S C++G+  ++ +L   
Sbjct: 334 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 393

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + G  PD  TYS+LI G C+ G ++EA ++   M     KPD   ++ L+ G CK  R
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR 453

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
              +L +F+ M   G  P+  TY I+++G+
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQGL 483



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 225/461 (48%), Gaps = 1/461 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   ++ A   L  MV  G  PD +   ++++  C + + K+AI  ++ M S G+ PD  
Sbjct: 135 KAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVV 194

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK G    A ++ + M   G      TY +L++G    G L +    LD +
Sbjct: 195 TYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 254

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ PN + +S L+ A  K+  V  AM +   +  +G  PN V+Y  ++  LCK GR 
Sbjct: 255 VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 314

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+ +F  +  +G  P  + YN L+  LC   +WE A EL+ EM         + +N +
Sbjct: 315 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 374

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I S    G+   + K+ D MV+   +P   +Y+ +I   C  GK+D   K L  M     
Sbjct: 375 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 434

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+  TY+ L    C + ++++A  + + + +   S     Y  ++  L +  +T  A +
Sbjct: 435 KPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 494

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   +TK G   +  TY+ ++ GLC   L ++AL +F  +   D K +   FN ++  L 
Sbjct: 495 LYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 554

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           K  R D + ++F      G +PN  TY ++ E I  Q  LE
Sbjct: 555 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 595



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 221/438 (50%), Gaps = 3/438 (0%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQS 187
           IPD  SY  L+N LC +     A++L+  M D G   P + V+Y++++ G    G+L+++
Sbjct: 48  IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKT 107

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
               + ++ + + PN  TY+ ++ A  K + V  AM++L  ++  G  P+ ++YN ++ G
Sbjct: 108 YSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 167

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            C  G+ +EAI F + + S G EP+VV+YN L+  LC  GR  EA ++   M      P 
Sbjct: 168 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           I TY  L+   A  G       +LD MV+    P+   ++ ++     + KV+  +    
Sbjct: 228 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 287

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M  +   PN  TY   + +LC  G+V++A    + + ++  S     Y  +I  LC   
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 347

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           K  +A +L+ EM   G   ++  ++S+I   C EG + E+ ++F +M     KPD+  ++
Sbjct: 348 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 407

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            L+ G C + + D + ++   M+  G  P+  TY+ L+ G      ++ +  + +E++  
Sbjct: 408 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESS 467

Query: 547 QVVSESAVERLVMQYDFE 564
            V  +     +++Q  F+
Sbjct: 468 GVSPDIITYNIILQGLFQ 485



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 186/381 (48%), Gaps = 1/381 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K+ +A L   +M  +G  P+ V    ++  LCK+ +++ A+   E M+  G+ P   
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 334

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++ LC       A +L+ +M D G   NT+ +NS++   C  G + +S +  D +
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 394

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ P+  TYS L++       +  A KLL  +++ G KP+ V+Y+ L+ G CK  R 
Sbjct: 395 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRM 454

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  FR++ S G  P++++YNI+L+ L    R   A EL   +    R   + TYNI+
Sbjct: 455 KDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNII 514

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  +  TD AL++   +     +  A ++N +I  L   G+ D              
Sbjct: 515 LHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 574

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TY  +A  + G G ++E   +  S+ +   +       +++  L ++G+  +A  
Sbjct: 575 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 634

Query: 434 LLYEMTKYGFTPDSYTYSSLI 454
            L  + +  F+ ++ T S  I
Sbjct: 635 YLSMIDEKHFSLEASTASLFI 655



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 162/330 (49%), Gaps = 4/330 (1%)

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE--PNVVSYNIL 279
           A  + D+++ +G  P++ SYN+LL GLC E R++EA+     +   G +  P+VVSY+ +
Sbjct: 36  ARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +     EG  ++      EM     SP +VTYN +I +L      D A++VL  MVK   
Sbjct: 95  INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
            P   +YN I+   CS G+    +  L +M     +P+  TYN L   LC  G+  EA  
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 214

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           I  S+  +        Y  ++     KG   +   LL  M + G  P+ Y +S L+    
Sbjct: 215 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 274

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            +  +EEA+ +F  M +    P+   + A++  LCKS R + ++  F+ MI++G  P   
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 334

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQV 548
            Y  L+ G+   ++ E + E++ E+  R +
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDRGI 364



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 135/288 (46%), Gaps = 1/288 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++ ++ ++    + MV  G KPD++  + L+   C A KM +A K++  MVS G+ 
Sbjct: 376 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 435

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L+N  CK   +  A+ L  +ME  G   + +TYN +++GL        + + 
Sbjct: 436 PDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 495

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + + G      TY+ +L    K +    A+++  ++     K    ++N+++  L K
Sbjct: 496 YVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLK 555

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR +EA   F    S G  PN  +Y ++  ++  +G  EE ++L   M+    +     
Sbjct: 556 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 615

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
            N ++  L   G+   A   L  + +  F   A++ +  I  L S GK
Sbjct: 616 LNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI-DLLSGGK 662


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 233/493 (47%), Gaps = 40/493 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGIIPDA 133
           R H+    F    R +  G K DV+ A  LL  LC A +   A+ V +  M   G+ PD 
Sbjct: 131 RAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDT 190

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
            SY+ ++  LC+      A+ L+  M  +  G   N V+YN+++ G    G ++++    
Sbjct: 191 ISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLF 250

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG---- 247
             ++Q+G+VP+  TYS  ++A  K R +  A  +L  +I+ G +P+ V+YN ++ G    
Sbjct: 251 HEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSIL 310

Query: 248 -------------------------------LCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
                                          LCK G+++EA  FF  + +KG +P++V+Y
Sbjct: 311 GQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTY 370

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           ++LL     EG   +   L   M+G         YNILI +    G  D A+ +  +M +
Sbjct: 371 SVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQE 430

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQE 395
               P A +Y  +IA     G++   +   +QM     KP+   YN L    C  G + +
Sbjct: 431 RGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVK 490

Query: 396 AFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           A  +I  + ++    P   F+  +I SLC++G+  +A  +   +   G  PD  T++SLI
Sbjct: 491 AKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLI 550

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G  + G +E+A  +   M     +PDV  ++ALL G C++ R D  L +F+ M+ KG  
Sbjct: 551 DGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVK 610

Query: 515 PNETTYTILVEGI 527
           P   TY I++ G+
Sbjct: 611 PTTITYGIILHGL 623



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 221/475 (46%), Gaps = 10/475 (2%)

Query: 76  DHKLNDAFLQLERMVSK--GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           D +   A   L  MV K  G  P+VV    +++   +  ++ KA  +   M+  G++PD 
Sbjct: 203 DSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDV 262

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y+  ++ LCK   +  A  ++ +M   G+  + VTYN ++ G  +LG   ++      
Sbjct: 263 VTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFRE 322

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + ++GL+P+ FT +  + +  K      A +  D + AKG KP+LV+Y+VLL G   EG 
Sbjct: 323 MTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGY 382

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             + +  F  +   G   +   YNIL+ +    G  +EA  +  +M      P   TY  
Sbjct: 383 VVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGT 442

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I + +  G+   A+   ++M+    +P    YN +I   C  G +    + + +M  R 
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG 502

Query: 374 C-KPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +PN   +N +   LC  G+V EA   F ++  +G + +      +  +I      GK 
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVIT---FNSLIDGYGLVGKM 559

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +AF +L  M   G  PD  TYS+L+ G C  G I++ L +F  M     KP    +  +
Sbjct: 560 EKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGII 619

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L GL    RT  + ++   MIE G   + +T  I++ G+   +  + +  + K+L
Sbjct: 620 LHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 221/472 (46%), Gaps = 10/472 (2%)

Query: 82  AFLQLERMVSKGHKPDVVQAT----NLLYDLC-KANKMKKAIKVMEMMVSSGIIPDASSY 136
           A     R+  +  +P V   T    N+L D C +A++      +    + +G+  D    
Sbjct: 98  AVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVA 157

Query: 137 TYLVNCLCKKGNVGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
             L+ CLC       A+  L+ +M + G   +T++Y+++++ LC      ++L  L  ++
Sbjct: 158 NILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMV 217

Query: 196 QK--GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +K  G  PN  +Y+ ++   ++E  V  A  L  +++ +G  P++V+Y+  +  LCK   
Sbjct: 218 KKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARA 277

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A    R + S GFEP+ V+YN ++    + G+W+E   +  EM      P I T N 
Sbjct: 278 MDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNS 337

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
            + SL  HGK+  A +  D M     +P   +Y+ ++    +EG V  ++   + M    
Sbjct: 338 YMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNG 397

Query: 374 CKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              +   YN L    G  G + EA  I   +  +        Y  VI +  R G+   A 
Sbjct: 398 IVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAM 457

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV-VMEEYDYKPDVDNFNALLLG 491
               +M   G  PD+  Y+SLI+G CM G + +A E+   +M     +P+   FN+++  
Sbjct: 458 DKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINS 517

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           LCK  R   + ++F ++I  G+ P+  T+  L++G     ++E +  VL  +
Sbjct: 518 LCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM 569



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 204/450 (45%), Gaps = 35/450 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
              M  +G  PD+    + +  LCK  K K+A +  + M + G  PD  +Y+ L++    
Sbjct: 320 FREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAA 379

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G V   + L   ME  G   +   YN L+      G +++++    ++ ++G++P+A+T
Sbjct: 380 EGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWT 439

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  ++ A  +   +  AM   + +IA G KP+ + YN L+ G C  G   +A     ++ 
Sbjct: 440 YGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMM 499

Query: 266 SKGF-EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
           S+G   PN V +N ++ SLC EGR  EA ++   +      P ++T+N LI      GK 
Sbjct: 500 SRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKM 559

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + A  VLD M+     P   +Y+ ++   C  G++D  +    +M  +  KP   TY   
Sbjct: 560 EKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYG-- 617

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                                            ++  L   G+T  A ++ +EM + G T
Sbjct: 618 --------------------------------IILHGLFNDGRTVGAKKMCHEMIESGTT 645

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            D  T   ++ GLC     +EA+ +F  +   + K ++   N ++  + K R+ + + E+
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANEL 705

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           F  +   G +PN +TY +++  +  +  +E
Sbjct: 706 FDSISATGLVPNASTYGVMITNLLKEGSVE 735



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 176/369 (47%), Gaps = 2/369 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDA 133
           R  +L DA  +  +M++ G KPD +   +L+   C    + KA +++  M+S GI  P+ 
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNT 508

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             +  ++N LCK+G V  A  + + +   G   + +T+NSL+ G  ++G + ++   LD 
Sbjct: 509 VFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDA 568

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +I  G+ P+  TYS LL+   +   +   + L  ++++KG KP  ++Y ++L GL  +GR
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A +   ++   G   ++ +  I+L  LC     +EA  L  ++   +    I   N 
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINT 688

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I ++    K + A ++ D +      P+A++Y  +I  L  EG V+        M    
Sbjct: 689 MIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+    N +  +L   G++ +A   +  +  K  S        +++   RKGK  +  
Sbjct: 749 CAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQI 808

Query: 433 QLLYEMTKY 441
           + L  M ++
Sbjct: 809 KSLPAMYQF 817



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 4/321 (1%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA-NE 294
           P + +YN+L+   C+  R       F      G + +V+  NILL+ LC   R ++A N 
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK--GRFRPSAASYNPIIAR 352
           LL  M      P  ++Y+ ++ SL    ++  AL +L  MVK  G   P+  SYN +I  
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
              EG+V        +M  +   P+  TY+  +  LC    + +A  +++ + +      
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           +  Y  +I      G+  +   +  EMT+ G  PD +T +S +  LC  G  +EA E F 
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M    +KPD+  ++ LL G          L +F  M   G + + + Y IL++    + 
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 532 ELELSAEVLKELQLRQVVSES 552
            ++ +  +  ++Q R V+ ++
Sbjct: 417 MMDEAMLIFTQMQERGVMPDA 437


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 250/536 (46%), Gaps = 34/536 (6%)

Query: 32  LHSFSLNKG----FIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLE 87
            HSF   K     FI   +S+++   P  S+ T           T H ++ + DAF    
Sbjct: 18  FHSFQFLKNTHFNFIP-YSSSKINFIPYSSIST-----------TFHNNNDVVDAFSLFS 65

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI----------------IP 131
           R++ +   P  ++   +L  L K+      + + + M   GI                 P
Sbjct: 66  RLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHP 125

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  ++T L+  LC KG +  A+   + +   G+  + V Y +L+ GLC +G    +L  L
Sbjct: 126 NTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLL 185

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
            R+    + PN   YS +++   K++ V+ A  L  ++++KG  PN+V+Y+ L++G    
Sbjct: 186 RRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTV 245

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ ++AI  F  +  +  +P+V ++NIL+   C +G+ +E   + A M      P +VTY
Sbjct: 246 GQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTY 305

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             L+       + + A  +L  M +    P   SYN +I   C   KVD  +    +M H
Sbjct: 306 CSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHH 365

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +   P+  TYN L   LC +GK+  A  ++  + ++        Y  ++ +LC+  +  +
Sbjct: 366 KHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDK 425

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL ++   G  P+ YTY+ LI GLC  G +E+A  IF  +    Y   V+ +  ++ 
Sbjct: 426 AIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIH 485

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           G C     D +L +   M +   +P+  TY I++  +  +DE +  AE L+E+  R
Sbjct: 486 GFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDEND-KAEKLREMITR 540



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 145/263 (55%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+ +       M+ +G KP+VV   +L+   C   ++ KA  ++  M   G+ PD  
Sbjct: 279 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQ 338

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++  CK   V  AM L ++M       + VTYNSL+ GLC LG ++ +L+ +D +
Sbjct: 339 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 398

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+ P+  TYS +L+A  K   V  A+ LL  +  +G +PN+ +Y +L+ GLCK GR 
Sbjct: 399 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRL 458

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A   F DL  KG+   V +Y +++   C +G ++EA  LL++M      P  VTY I+
Sbjct: 459 EDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEII 518

Query: 315 IGSLAYHGKTDHALKVLDEMVKG 337
           I SL    + D A K+ + + +G
Sbjct: 519 IRSLFDKDENDKAEKLREMITRG 541



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 20/315 (6%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           K N + Y+ + T         +A   F  L  +   P  + +N +L SL     +     
Sbjct: 38  KINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLS 97

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L  +M+    +P +           +H +  H L          + P+  ++  +I  LC
Sbjct: 98  LSQQMEFEGINPVL-----------FHFQHPHQLM--------GYHPNTITFTTLIKGLC 138

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            +G++   +   D +     + ++  Y  L   LC VG+ + A  +++ +          
Sbjct: 139 LKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVV 198

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I  +C+      AF L  EM   G +P+  TYS+LI G    G +++A+++F  M
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
              + KPDV  FN L+ G CK  +      VF MM+++G  PN  TY  L++G     E+
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318

Query: 534 ELSAEVLKELQLRQV 548
             +  +L  +  R V
Sbjct: 319 NKAKSILYTMSQRGV 333


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 237/486 (48%), Gaps = 17/486 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RMV  G +PD +     +  +CK      A+ ++  M   S I P+ 
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ LCK G    +  L  +M+D G   N VTYN ++ G C+ G  + + + L  
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++++ + PN  TY+ L+ A  KE     A +L D+++ +G  PN ++YN ++ G CK+ R
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F  + +KG  P+V ++  L+   C   R ++  ELL EM         VTYN 
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +  +M+     P   + N ++  LC  GK+   ++    M   +
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 374 -----------CKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                       +P+  TYN   ++CG+   GK  EA  + + + ++        Y  +I
Sbjct: 494 MDLDASHPFNGVEPDVLTYN--ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC++ +  +A Q+   M    F+P+  T+++LI G C  G +++ LE+F  M      
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
            D   +  L+ G  K    + +L++FQ MI  G  P+  T   ++ G   ++ELE +  +
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671

Query: 540 LKELQL 545
           L++LQ+
Sbjct: 672 LEDLQM 677



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 240/528 (45%), Gaps = 53/528 (10%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  K  + D+   T L+   C  +K+  A+     +   G+ PD  ++T L++ LC  
Sbjct: 105 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLD 164

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A+ L  ++       + +T+ +L+ GLC  G + +++  LDR+++ GL P+  TY
Sbjct: 165 HRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITY 220

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
              ++   K     +A+ LL  +      KPN+V Y+ ++ GLCK+GR  ++   F ++ 
Sbjct: 221 GTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQ 280

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  PN+V+YN ++   C+ GRW  A  LL EM     SP +VTYN LI +    GK  
Sbjct: 281 DKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFF 340

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++ DEM+     P+  +YN +I   C + ++D        M  + C P+  T+  L 
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              CG  ++ +   ++  +  +   +    Y  +I   C  G    A  L  +M   G  
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVM------------------------------- 473
           PD  T ++L+ GLC  G +++ALE+F  M                               
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520

Query: 474 ------------EEYDYK---PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
                       EE  ++   PD   +++++ GLCK  R D + ++F  M  K   PN  
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGI 566
           T+  L+ G      ++   E+  E+  R +V++ A+  + + Y F  +
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD-AIIYITLIYGFRKV 627



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 229/506 (45%), Gaps = 44/506 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA      M+     P V+    L+  + +  +    I + + M    I  D  S+T 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM------------------ 180
           L+ C C    + +A+    K+   G   + VT+ +L+ GLC+                  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 181 -------------LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
                         G + +++  LDR+++ GL P+  TY   ++   K     +A+ LL 
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 228 DIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            +      KPN+V Y+ ++ GLCK+GR  ++   F ++  KG  PN+V+YN ++   C+ 
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GRW  A  LL EM     SP +VTYN LI +    GK   A ++ DEM+     P+  +Y
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
           N +I   C + ++D        M  + C P+  T+  L    CG  ++ +   ++  +  
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           +   +    Y  +I   C  G    A  L  +M   G  PD  T ++L+ GLC  G +++
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481

Query: 466 ALEIFVVMEEYD-----------YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           ALE+F  M++              +PDV  +N L+ GL    +   + E+++ M  +G +
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 515 PNETTYTILVEGIAHQDELELSAEVL 540
           P+  TY+ +++G+  Q  L+ + ++ 
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMF 567



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 170/372 (45%), Gaps = 6/372 (1%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L  ++     +++   +P+   ++ L+ A  +       + L   +  K  + ++ S+ +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C   +   A+  F  L   G  P+VV++  LL  LC++ R  EA +L  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P ++T+  L+  L   G+   A+ +LD MV+   +P   +Y   +  +C  G     +
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 364 KCLDQMFH-RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
             L +M      KPN   Y+ +   LC  G+  ++  +   + +K        Y  +I  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            C  G+   A +LL EM +   +P+  TY++LI     EG   EA E++  M      P+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              +N+++ G CK  R D + ++F +M  KG  P+  T+T L++G      ++   E+L 
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 542 ELQLRQVVSESA 553
           E+  R +V+ + 
Sbjct: 418 EMPRRGLVANTV 429


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 242/480 (50%), Gaps = 16/480 (3%)

Query: 97  DVVQATNLLYDLCKANKMKKA---IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           D V    +L  LC+     +A   ++ M +       P+A SYT L+  LC       A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            L+  M   G   + VTY +L+RGLC    ++++++ +  + + G+ PN   YS LL+  
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K        K+  ++  KG +P++V Y  L+  LCK G+ ++A      +  +G EPNV
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V+YN+L+  +C EG  +EA  +L +M     +P +VTYN LI  L+   + D A+ +L+E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 334 MVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAML 387
           MV+G+   +P+  ++N +I  LC  G++    +    M    C  N  TYN    GL  +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
             V K  E    + SLG +    P  F Y  +I   C+  +  +A  LL  M   G  P+
Sbjct: 376 HKVRKAMELMDEMTSLGLE----PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            + Y  L+  +C +G++E A  +F  M+  ++  DV  ++ ++ G CK+     + E+ +
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV-ERLVMQYDFEG 565
            ++++G  P+  TY+I++   A   ++E +  VLK++     + + AV + L+  Y  +G
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 215/442 (48%), Gaps = 10/442 (2%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D   + A   L  M S G + DVV    L+  LC A ++ KA+++M  M  SGI P+   
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y+ L+   CK G      ++  +M + G   + V Y  L+  LC +G   ++   +D ++
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++GL PN  TY+ L+    KE  V  A+ +L  +  KG  P++V+YN L+ GL      +
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307

Query: 256 EAIRFFRDLPSKG---FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           EA+    ++  +G    +PNVV++N +++ LC  GR  +A ++ A M+       +VTYN
Sbjct: 308 EAMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +LIG L    K   A++++DEM      P + +Y+ +I   C   +VD     L  M  R
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTY 429
             +P    Y  L + +C  G ++ A  +   +    N+ P +   Y  +I   C+ G   
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEM---DNNFPLDVVAYSTMIHGACKAGDLK 483

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +LL  +   G TPD+ TYS +I      G +E A  +   M    + PDV  F++L+
Sbjct: 484 TAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543

Query: 490 LGLCKSRRTDLSLEVFQMMIEK 511
            G       +  LE+ + MI K
Sbjct: 544 QGYSTKGEINKVLELIREMITK 565



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 232/464 (50%), Gaps = 6/464 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           +P+ V  T L+  LC      +A+ ++  M S+G+  D  +Y  L+  LC    V  A++
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L+ +M + G   N V Y+SL++G C  G      +    + +KG+ P+   Y+ L+++  
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K      A  ++D ++ +G +PN+V+YNVL+  +CKEG  +EAI   + +  KG  P+VV
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILIGSLAYHGKTDHALKVLD 332
           +YN L++ L      +EA  LL EM  G     P +VT+N +I  L   G+   A +V  
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
            M +     +  +YN +I  L    KV   ++ +D+M     +P+  TY+ L    C + 
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW 411

Query: 392 KVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           +V  A  ++ ++ ++    P+ F Y  ++ ++C +G   +A  L  EM    F  D   Y
Sbjct: 412 QVDRAEDLLSTMRDR-GIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAY 469

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S++I G C  G ++ A E+   + +    PD   ++ ++    KS   + +  V + M  
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            G +P+   +  L++G + + E+    E+++E+  + +  +S +
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKI 573



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 182/368 (49%), Gaps = 12/368 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII--PD 132
           ++  + +A   L++M  KG  PDVV    L+  L    +M +A+ ++E MV    I  P+
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             ++  ++  LC  G +  A Q+   ME+ G   N VTYN L+ GL  +  + ++++ +D
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +   GL P++FTYS L++   K   V  A  LL  +  +G +P L  Y  LL  +C++G
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             E A   F ++ +  F  +VV+Y+ ++   C  G  + A ELL  +     +P  VTY+
Sbjct: 447 MMERARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYS 505

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I+I   A  G  + A  VL +M    F P  A ++ +I    ++G+++ V++ + +M  +
Sbjct: 506 IVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN------KQN-SSPQEFYKYVITSLCRK 425
               +    + L+    +    E  A++QSL +      K N +SPQE  K +  ++  K
Sbjct: 566 NIALDSKIISTLS--TSLVASNEGKALLQSLPDFSAEISKGNINSPQELMKVLHNAISFK 623

Query: 426 GKTYQAFQ 433
             + Q   
Sbjct: 624 APSNQQLH 631



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 133/277 (48%), Gaps = 5/277 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R HK+  A   ++ M S G +PD    + L+   CK  ++ +A  ++  M   GI P+  
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+  +C++G +  A  L  +M D  +P + V Y++++ G C  G+L  + + L  +
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +GL P+A TYS ++    K   + AA  +L  + A G  P++  ++ L+ G   +G  
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCM--EGR--WEEANELLAEMDGGDRSPTIVT 310
            + +   R++ +K    +    + L  SL    EG+   +   +  AE+  G+ +     
Sbjct: 553 NKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAEISKGNINSPQEL 612

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
             +L  ++++   ++  L    ++  G F  S AS++
Sbjct: 613 MKVLHNAISFKAPSNQQLHKRAKLNLGTFAGSLASWS 649


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 226/450 (50%), Gaps = 5/450 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A+  LE M+ KG  P+V   T L+  LCKAN++ +A +++E MV+ G  P+  +Y+ 
Sbjct: 200 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYST 259

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LCK+G V  A +L + ME    P N VT+N L+ GLC    + ++ Q   R+ + G
Sbjct: 260 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 319

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG-GKPNLVSYNVLLTGLCKEGRTEEA 257
             P+  TY+ L++   K   V  A +L   I   G    N V+Y+ L  G    GR  +A
Sbjct: 320 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 379

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R F  L  KGF P++ +Y  L+   C   R  E  EL+ EM      P + T + ++G 
Sbjct: 380 CRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 439

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-- 375
           L     T+ A+++ D M        A  YN ++  +    K +  +  L+Q+  +R +  
Sbjct: 440 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKF 499

Query: 376 -PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+    + L   LC VG+  +A  ++  +  +  ++    Y  +++ L R  +  +A Q
Sbjct: 500 NPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQ 559

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M   G  P+  T + +I  LC    +++A E+   M +    PD++  N L+ G C
Sbjct: 560 VFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 619

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           KS R DL+ ++ + M E G  PN+TT+ +L
Sbjct: 620 KSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 230/463 (49%), Gaps = 11/463 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +++KG  P V+    ++   CKA  +  A K++E+M+  G +P+  ++T L+  LCK   
Sbjct: 175 VIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANR 234

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           VG A QL+EKM   G   N VTY++++ GLC  G ++ + +    + ++   PN  T++ 
Sbjct: 235 VGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNI 294

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K + +  A +L   +   G  P++++YN L+ GLCK  + +EA + F+ +P  G
Sbjct: 295 LIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESG 354

Query: 269 FE-PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
               N V+Y+ L       GR  +A  + + +     SP + TY  LI       +    
Sbjct: 355 VSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEV 414

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----G 383
           +++++EM    F P   + + ++  L      +  ++  D M  R C  +   YN    G
Sbjct: 415 VELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEG 474

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQN---SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           +A      K  +A A+++ + +K++   +        ++ SLC+ G+T  A QLL++M++
Sbjct: 475 MAR---ASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSE 531

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            GF     +Y+ L+ GL      +EA ++F  M      P++   N ++  LC + + D 
Sbjct: 532 RGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDD 591

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + E+ Q M + G  P+  T   L+ G       +L+ ++L+E+
Sbjct: 592 AYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEM 634



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 242/534 (45%), Gaps = 80/534 (14%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R ++K   PDV+  T L++ LCKA K  +A  ++  M++ G  PD  +++ L++ LCK G
Sbjct: 68  RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFG 127

Query: 148 NVGYAMQLVEKMEDY------------------------------------GYPTNTVTY 171
           +   A +++E +                                       G+    + +
Sbjct: 128 SEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMF 187

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N ++ G C   +L+ + + L+ +I+KG VPN FT++ L+    K   V  A +LL+ ++ 
Sbjct: 188 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVT 247

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G  PN+V+Y+ ++ GLCK+G+ ++A   F+ +  +   PNVV++NIL+  LC   R EE
Sbjct: 248 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLA-------------------------------Y 320
           A +L   M     +P I+TYN LI  L                                +
Sbjct: 308 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 367

Query: 321 H-----GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           H     G+   A ++   +V   F P  A+Y  +I   C   +   VV+ +++M  +   
Sbjct: 368 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 427

Query: 376 PNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           P   T +  A+L G+      + A  +  S+  +  +     Y  V+  + R  K  +A 
Sbjct: 428 PRVNTLS--AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKAL 485

Query: 433 QLLYEMT---KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            +L ++       F P S    +L+  LC  G  ++A ++   M E  +   V ++N LL
Sbjct: 486 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLL 545

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            GL + +R D + +VF+ M+  G  P  +T  +++  +    +++ + E+++ +
Sbjct: 546 SGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRM 599



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 222/469 (47%), Gaps = 39/469 (8%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P+  +Y  L+      G++  A+QL+E+M+  G+  N V + +L++GLC  G + ++L+
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              R + K   P+  TY+ L+ A  K      A  +L ++IA+G  P+ V+++ L+ GLC
Sbjct: 66  HF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 250 KEGRTEEAIRFFRDLP------------------------------------SKGFEPNV 273
           K G  E+A R   D+                                     +KGF P V
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           + +N+++   C     + A +LL  M      P + T+ ILI  L    +   A ++L++
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           MV G   P+  +Y+ +I  LC +G+VD   +    M  R C PN  T+N L   LC   +
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP-DSYTYS 451
           ++EA  +   +     +     Y  +I  LC+  +  +AFQL   + + G +  ++ TYS
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +L  G    G + +A  IF ++ +  + PD+  + +L+L  CK+ R    +E+ + M  K
Sbjct: 365 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 424

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           G  P   T + ++ G+   +  E + ++   +  R    ++ +  LV++
Sbjct: 425 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVE 473



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 153/316 (48%), Gaps = 4/316 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKG-HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
           D   +  ++++AF   + +   G    + V  + L +      +M  A ++  M+V  G 
Sbjct: 332 DGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGF 391

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD ++YT L+   CK       ++LVE+M   G+P    T ++++ GL    +  +++Q
Sbjct: 392 SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQ 451

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK---PNLVSYNVLLT 246
             D +  +G   +A  Y+ ++E   +    + A+ +L+ +I K  +   P+  + + L+ 
Sbjct: 452 LFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVE 511

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            LC+ GRT++A +    +  +GF   V SYN LL  L    RW+EA ++   M     +P
Sbjct: 512 SLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAP 571

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            I T N++I  L    K D A +++  M K    P   + N +I   C  G+ DL  K L
Sbjct: 572 EISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLL 631

Query: 367 DQMFHRRCKPNEGTYN 382
           ++M     +PN+ T++
Sbjct: 632 EEMTEAGLEPNDTTHD 647



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 66/132 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   L +M  +G    V     LL  L +  +  +A +V E MVS+G  P+ S+  
Sbjct: 518 RTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVN 577

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC    V  A +LV++M   G   +  T N+L+ G C  G  + + + L+ + + 
Sbjct: 578 VVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEA 637

Query: 198 GLVPNAFTYSFL 209
           GL PN  T+  L
Sbjct: 638 GLEPNDTTHDLL 649



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 49/100 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + ++A    E MVS G  P++     ++  LC A K+  A ++++ M   G  PD  
Sbjct: 550 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 609

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           +   L+   CK G    A +L+E+M + G   N  T++ L
Sbjct: 610 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 222/471 (47%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L DA   L     +   P VV    L+   CK   +  A     MM+  G++PD  
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++ LC  G++  A++    ME++G   + VTYN L  G  +LG ++ + + + R+
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRM 366

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GL P+  TY+ L+    +   +  + KL + ++++G K ++V+Y VLL+ LCK GR 
Sbjct: 367 LLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRI 426

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+    ++   G +P++++Y++L+  LC  G  EEA EL  EM      P     + +
Sbjct: 427 DEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAI 486

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G    A    D + K         YN +I      G +   V+   Q+  +  
Sbjct: 487 ISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 546

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P   T+N L    C  GK+ EA  ++ ++           Y  ++   C +G  +  F 
Sbjct: 547 SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFD 606

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L+EM      P   TY+ +++GLC EG + E++++   M      PD   +N ++   C
Sbjct: 607 MLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC 666

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K+     + ++   M++    P+  TY +L+ G+     L+ +  +L  LQ
Sbjct: 667 KAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQ 717



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 216/438 (49%), Gaps = 1/438 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + ++F   E+M+S+G K  +V  T LL  LCK+ ++ +A+ ++  M   G+ PD  +Y+ 
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSV 450

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ LCK+G V  A++L E+M       N+   ++++ GL   G ++++  + D + +  
Sbjct: 451 LIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD 510

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +      Y+ +++   K   +  A++    II KG  P +V++N L+ G CK+G+  EA+
Sbjct: 511 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 570

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +    +   G  P  V+Y  L+   C EG      ++L EM+     PT +TY +++  L
Sbjct: 571 KLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 630

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+   ++++L  M      P   +YN +I   C    +    +  +QM     +P+ 
Sbjct: 631 CKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSP 690

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L   LC  G +++A  ++ +L ++     +  Y  +I + C KG    A    ++
Sbjct: 691 VTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQ 750

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + GF      YS++I  LC   LI +A   F +M  +   PD D    +L    +S  
Sbjct: 751 MVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGD 810

Query: 498 TDLSLEVFQMMIEKGQMP 515
            +   E+F MMI+ G +P
Sbjct: 811 PNSVFEIFAMMIKCGLLP 828



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 217/460 (47%), Gaps = 36/460 (7%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G  PDV     LL+ LC A  M++A++    M + G+ PD  +Y  L N     G 
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A ++V++M   G   + VTY  L+ G C +GN+ +S +  ++++ +GL  +  TY+ 
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL +  K   +  A+ LL ++   G KP+L++Y+VL+ GLCK G  EEAI  + ++ SK 
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475

Query: 269 FEPN-----------------------------------VVSYNILLRSLCMEGRWEEAN 293
             PN                                   ++ YNI++      G   EA 
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
               ++     SPTIVT+N LI      GK   A+K+LD +      P++ +Y  ++   
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C EG +  +   L +M  +  KP + TY  +   LC  G++ E+  +++ +  +     Q
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  VI S C+     +AFQL  +M ++   P   TY+ LI GLC+ G +++A  + V 
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVT 715

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +++   +     +  ++   C       +L  F  M+E+G
Sbjct: 716 LQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 755



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 236/489 (48%), Gaps = 8/489 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++DA   L +M     +  +    +LLY+L   + M     V   + +SG+  +  
Sbjct: 180 RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQNEY 236

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L++ LC++  +  A+  + +     +  + V++N+L+ G C +G+++ +  F   +
Sbjct: 237 TNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMM 296

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ GL+P+ ++Y+ LL        +  A++  +D+   G +P++V+YN+L  G    G  
Sbjct: 297 IKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLI 356

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A +  + +   G  P++V+Y IL+   C  G  EE+ +L  +M       +IVTY +L
Sbjct: 357 SGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVL 416

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + SL   G+ D A+ +L EM     +P   +Y+ +I  LC  G V+  ++  ++M  +R 
Sbjct: 417 LSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRI 476

Query: 375 KPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            PN  ++   A++ G+   G + EA     S+     +     Y  +I    + G   +A
Sbjct: 477 YPN--SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 534

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +   ++ + G +P   T++SLI G C +G + EA+++   ++ +   P    +  L+ G
Sbjct: 535 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 594

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            C+        ++   M  K   P + TYT++V+G+  +  L  S ++LK +  R +  +
Sbjct: 595 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 654

Query: 552 SAVERLVMQ 560
                 V+Q
Sbjct: 655 QITYNTVIQ 663



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 155/363 (42%), Gaps = 37/363 (10%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N   +  L  A  +   VH A+ +L  +     + ++ +YN LL  L     T+     +
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVY 223

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++ + G   N  +  IL+  LC + R ++A   L E  G +  P++V++N L+      
Sbjct: 224 NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G  D A      M+K    P   SYN ++  LC  G ++  ++  + M +   +P+  TY
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
           N LA           F I+                         G    A++++  M   
Sbjct: 344 NILA---------NGFRIL-------------------------GLISGAWKVVQRMLLN 369

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD  TY+ LI G C  G IEE+ ++   M     K  +  +  LL  LCKS R D +
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           + +   M   G  P+  TY++L+ G+  +  +E + E+ +E+  +++   S V   ++  
Sbjct: 430 VILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISG 489

Query: 562 DFE 564
            FE
Sbjct: 490 LFE 492



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 90/197 (45%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L+++   L+ M ++G  PD +    ++   CKA+ ++KA ++   M+   + P   
Sbjct: 632 KEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPV 691

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LC  GN+  A +L+  ++D       V Y ++++  C  G++  +L F  ++
Sbjct: 692 TYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 751

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G   +   YS ++    K   +  A      ++  G  P+     V+L    + G  
Sbjct: 752 VERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDP 811

Query: 255 EEAIRFFRDLPSKGFEP 271
                 F  +   G  P
Sbjct: 812 NSVFEIFAMMIKCGLLP 828


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/492 (30%), Positives = 243/492 (49%), Gaps = 37/492 (7%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            ++++AF+  E M   G +P+V+  + LL  LCKA ++ +A ++ E MV    +PD  +Y
Sbjct: 158 ERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL-QFLDRLI 195
           T  V  LCK   V  A     KM   G   + V +++++  LC  G+  ++  Q ++ L 
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLC 277

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G++                     A K  +++I++   P+   +N L+  +CK  R  
Sbjct: 278 RSGMLDE-------------------ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 256 EAIRFFRDLPS-KGF--EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + +  F+ + S K F   PN+ +YNI++ +LC   + +EA EL+ EM     SP +VTY+
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+  L   GK D A  +L+EM K    P + +   I+  L   GKVD  +  L+ M  R
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
              P+  TYN L   LC  G++ EA   +  +   +  +P  F Y  +IT+LCR G+   
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK-CTPDVFSYTIIITALCRSGQAAG 497

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  +  EM K G  PD+  Y SL+ GL   GL + ALE+   ++    KPD      +L 
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLD 554

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           GLCK+ + + + EV + M + G   +  TY  +V G      L    +V K  QL    S
Sbjct: 555 GLCKAGKAEDACEVVERMADAGFPADAFTYISVVSG------LRKLGKVDKARQLVDDAS 608

Query: 551 E--SAVERLVMQ 560
           E  ++VERL M+
Sbjct: 609 ETHTSVERLSME 620



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 238/478 (49%), Gaps = 23/478 (4%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+ + ++M  +G+ PD    + +L  LCKA ++ KA +++  +  SG+  +  +Y+ +++
Sbjct: 57  AYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVID 116

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             CK   V  A+++ + M   G    + VT+NSL++GLC    ++++    + + + G  
Sbjct: 117 GCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE 176

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN  +YS LL+   K   +  A +L ++++ K   P+LV+Y   +TGLCK  R  EA   
Sbjct: 177 PNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDC 236

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            R + +KG + + V+++ ++  LC +G  EEA                   N +I  L  
Sbjct: 237 CRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ------------------NQMIEHLCR 278

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD---LVVKCLDQMFHRRCKPN 377
            G  D A K  +EM+     PSA  +N +I  +C   ++    L+ + +  M    C PN
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN +   LC   ++ EA  ++  + N   S     Y  ++  LC+ GK  +A  LL 
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM+K G  PDS+T +S++  L   G ++ AL     M+     PD+  +N LL GLCK+ 
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           R D ++     M+     P+  +YTI++  +    +   +  + +E+  R V+ ++ +
Sbjct: 459 RIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 181/358 (50%), Gaps = 15/358 (4%)

Query: 61  KPNRKPGNNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI 118
           K + +   N    H  R   L++A    E M+S+ H P       L++ +CK+ ++   +
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321

Query: 119 KVMEMMVSSG---IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
            + + M S       P+  +Y  +V+ LCK   +  A +LV +M +YG   + VTY++LV
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
            GLC LG L+++   L+ + ++G+ P++FT + +L A  K   V  A+  L+ + A+G  
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P+LV+YN LL GLCK GR +EAI F   + +    P+V SY I++ +LC  G+   A+ +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             EM      P  V Y+ L+  LA +G  D AL++L   +    +P    +  ++  LC 
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVLDGLCK 558

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNS 409
            GK +   + +++M       +  TY    +GL  L   GKV +A  ++        S
Sbjct: 559 AGKAEDACEVVERMADAGFPADAFTYISVVSGLRKL---GKVDKARQLVDDASETHTS 613



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 189/395 (47%), Gaps = 23/395 (5%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           GY  +  TYN  +  L        + +   ++ ++G  P+ FTYS +L    K   +  A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS-KGFEPNVVSYNILLR 281
            +LL  +   G K N+++Y+V++ G CK  R ++A+  F+ + S  G  P+VV++N LL+
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC   R  EA  L   M      P +++Y+ L+  L   G+ D A ++ +EMV+    P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAII 400
              +Y   +  LC   +V     C  +M  +  K +   ++  + +LC  G  +EA    
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA---- 268

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
                 QN         +I  LCR G   +A +   EM      P +  +++LI  +C  
Sbjct: 269 ------QNQ--------MIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKS 314

Query: 461 GLIEEALEIFV---VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
             + + + +F     M+E+   P+++ +N ++  LCK+++ D + E+   M   G  P+ 
Sbjct: 315 KRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDV 374

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            TY+ LV+G+    +L+ + ++L+E+    V  +S
Sbjct: 375 VTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDS 409



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 2/146 (1%)

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
           +GK+     +   LG ++      F Y   + +L +      A++   +M + G+ PD +
Sbjct: 15  LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDF 74

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TYS ++RGLC  G +++A E+   + E   K +V  ++ ++ G CK+ R D +LE+F+ M
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 509 IEKGQ-MPNETTYTILVEGIAHQDEL 533
              G  +P+  T+  L++G+   + +
Sbjct: 135 SSGGGCVPDVVTFNSLLKGLCSGERM 160


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 253/524 (48%), Gaps = 40/524 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K++DA    + M++ G + ++     L+   CK  ++ +A +++  MV   + 
Sbjct: 332 DGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLE 391

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P++ SY+ L++  C++G V  A+ +  +M   G  +N VT+NSL++GLC +G    +L  
Sbjct: 392 PESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHV 451

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++++G+ P+  +Y  LL+  +K      A+ L +DI+A+G   +  ++N ++ G CK
Sbjct: 452 WHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCK 511

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             +  EA   F  +   GFEP+ V+Y  L+   C  G  EEA ++  +M+     P+I  
Sbjct: 512 MEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIEL 571

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LIG L    KT   + +L EM      P+  +Y  +IA  C EG++D        M 
Sbjct: 572 YNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMI 631

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGN------------------------ 405
            +   PN    + + + L  +G++ EA  ++Q + N                        
Sbjct: 632 EKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQ 691

Query: 406 ----------KQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
                     K  S P    Y   I  LC+ GK   A ++   +   GF+PD++TY +LI
Sbjct: 692 KIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLI 751

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G    G + +A  +   M +    P++  +NAL+ GLCKS   D + ++F  +  KG  
Sbjct: 752 HGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLA 811

Query: 515 PNETTYTILVEGIAH----QDELELSAEVLKELQLRQVVSESAV 554
           PN  +Y IL++G       ++ L+L  ++LKE     +++ SA+
Sbjct: 812 PNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSAL 855



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 232/474 (48%), Gaps = 9/474 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G + +VV   +LL  LC+    + A+ V  +M+  G+ PD  SY  L++ L K G 
Sbjct: 420 MLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGE 479

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ L   +   GY  +T  +N+++ G C +  + ++ +  +R+ + G  P+  TY  
Sbjct: 480 FFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRT 539

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K   V  A K+ + +  +   P++  YN L+ GL K  +T E +    ++  KG
Sbjct: 540 LIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKG 599

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PNVV+Y  L+   C EGR ++A     +M     +P ++  + ++ SL   G+ D A 
Sbjct: 600 LSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEAN 659

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL--VVKCLDQMFHRRCKPNEGTYN-GLA 385
            +L +MV          ++ +      +G +D   +   LD+       PN   YN  +A
Sbjct: 660 MLLQKMVNLDVFLDHGYFDRL--HKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIA 717

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
            LC  GKV +A  I  SL   +  SP  F Y  +I      G    AF L  EM K G  
Sbjct: 718 GLCKSGKVDDAKKIFSSLL-LRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLA 776

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  TY++LI GLC  G ++ A ++F  +      P+V ++N L+ G CK+  T  +L++
Sbjct: 777 PNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDL 836

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
              M+++G  P+  TY+ L+ G   Q ++  +  +L E  +R++ ++  + + V
Sbjct: 837 RNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDE--MRELFADQNIAKFV 888



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 222/458 (48%), Gaps = 2/458 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + +A    + M   G  P +     LL  L +  +   AI V + +   GI+PD  + + 
Sbjct: 164 IKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSI 223

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +VN  CK G V  A+  V++M+  G+  N VTYNSL+ G   +G++ ++   L  + ++G
Sbjct: 224 MVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERG 283

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDI-IAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           ++ N  T + L++   ++  +  A K+L ++  ++G   +  +Y VL+ G C+  + ++A
Sbjct: 284 ILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDA 343

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +R   ++ + G   N+   N L+   C  G+  EA  LL  M   D  P   +Y+ L+  
Sbjct: 344 VRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDG 403

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A+ V +EM++   + +  ++N ++  LC  G  +  +     M  R   P+
Sbjct: 404 FCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPD 463

Query: 378 EGTY-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           E +Y   L +L  +G+   A A+   +  +        +  +I   C+  K  +A +   
Sbjct: 464 EVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFN 523

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M + GF PD  TY +LI G C  G +EEA ++   ME+    P ++ +N+L+ GL KS+
Sbjct: 524 RMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSK 583

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +T   +++   M  KG  PN  TY  L+ G   +  L+
Sbjct: 584 KTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLD 621



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 238/553 (43%), Gaps = 60/553 (10%)

Query: 30  PNLHSFS-LNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRH--------RDHKLN 80
           P  +S+S L  GF R     +  ++   SVY +  R    +N   H        R     
Sbjct: 392 PESYSYSTLMDGFCR-----EGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFE 446

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA      M+ +G  PD V    LL  L K  +  +A+ +   +++ G      ++  ++
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMI 506

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N  CK   +  A +   +M++ G+  + VTY +L+ G C LGN+ ++ +  +++ ++ ++
Sbjct: 507 NGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+   Y+ L+   +K +     M LL ++  KG  PN+V+Y  L+ G C EGR ++A   
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTA 626

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-------------------DG 301
           + D+  KGF PNV+  + ++ SL   GR +EAN LL +M                   DG
Sbjct: 627 YFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDG 686

Query: 302 G----------DRS------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
                      D S      P  V YNI I  L   GK D A K+   ++   F P   +
Sbjct: 687 NLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFT 746

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
           Y  +I    + G V+      D+M  R   PN  TYN L   LC  G +  A  +   L 
Sbjct: 747 YCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLH 806

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K  +     Y  +I   C+ G T +A  L  +M K G +P   TYS+LI G C +G + 
Sbjct: 807 LKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMG 866

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A  +   M E     ++  F  L+ G  K        ++  MM            TI  
Sbjct: 867 KATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM----------HITIPC 916

Query: 525 EGIAHQDELELSA 537
            G+    ++EL  
Sbjct: 917 AGVISHKQMELDV 929



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++DA      ++ +G  PD      L++    A  +  A  + + M+  G+ P+  +Y 
Sbjct: 724 KVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYN 783

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK GN+  A +L +K+   G   N ++YN L+ G C  GN  ++L   ++++++
Sbjct: 784 ALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKE 843

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+  TYS L+    K+  +  A  LLD++       N+  +  L+ G  K G  ++ 
Sbjct: 844 GISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKI 903

Query: 258 IRFFR----DLPSKG------FEPNVVSYNILLRSLCMEG 287
            +        +P  G       E +V S    +  LC++G
Sbjct: 904 AKLHNMMHITIPCAGVISHKQMELDVFSNAKEMLKLCVDG 943



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 91/225 (40%), Gaps = 15/225 (6%)

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +  FRP+  S+  ++  L      D     L+++      P++  Y+ L +   + +V E
Sbjct: 87  QSNFRPNVNSHCKLVHILSRARMYDETRSYLNELV----TPSKNNYSSLVVWNELVRVFE 142

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
            F            SP  F   ++   C KG    A  +   M K G  P   + + L+ 
Sbjct: 143 DFKF----------SPTVF-DMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLS 191

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
            L  +G    A+ ++  +      PDV   + ++   CK    +++++  + M   G   
Sbjct: 192 SLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFEL 251

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           N  TY  L++G     ++E +  VLK +  R ++       L+++
Sbjct: 252 NVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIK 296


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 227/474 (47%), Gaps = 20/474 (4%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G   + V  +N    LC   K +KA  V+  M+S G IPD S+Y+ ++  LC    
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A QL ++M+  G   +   Y +L+   C  G + Q+  + D + + G  PN  TY+ 
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF-------- 260
           L+ A  K R V  A ++ + +++KG  PN+V+Y  L+ GLCK G+ E+A +         
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKEN 357

Query: 261 ---------FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
                    FR +     EPNV +Y  L+  LC   + +EA +LL  M      P  V Y
Sbjct: 358 VEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVY 417

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           + LI      GK D A +V   M++  + P+  +Y+ +I RL  + ++DL +K L +M  
Sbjct: 418 DALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             C PN   Y  +   LC VGK  EA+ ++  +  K  +     Y  +I    + G+  +
Sbjct: 478 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEK 537

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
             +LL +M+  G  P+  TY  LI   C  GL++EA ++   M++  +   V  +  ++ 
Sbjct: 538 CLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIE 597

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           G   +R    SL +   + E   +P    Y +L++       LE++ E+ +EL 
Sbjct: 598 GF--NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELS 649



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 232/499 (46%), Gaps = 23/499 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM +    P+V+    LL       K+ +  +++ MM++ G  P    +  LV+  C+
Sbjct: 65  LTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCR 124

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN-----LNQSLQFLDRLIQKGLV 200
            G+  YA +L++KM   G     V YN L+ G+C         L+ + +    +++ G+V
Sbjct: 125 SGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVV 184

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            N    S              A  ++ ++++KG  P+  +Y+ ++  LC   + E+A + 
Sbjct: 185 LNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQL 244

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F+++   G  P+V  Y  L+ S C  G  E+A     EM+    +P +VTY  LI +   
Sbjct: 245 FQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLK 304

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV-----------VKCLDQM 369
             K   A +V + M+     P+  +Y  +I  LC  GK++             V+  D  
Sbjct: 305 SRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVD 364

Query: 370 FHRRC------KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
            H R       +PN  TY  L   LC   +V+EA  +++S+  +        Y  +I   
Sbjct: 365 MHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGC 424

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ GK  +A ++   M + G+ P+ YTYSSLI  L  +  ++ AL++   M E    P+V
Sbjct: 425 CKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNV 484

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +  ++ GLCK  +TD + ++  MM EKG  PN  TYT +++G      +E   E+L++
Sbjct: 485 VIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQ 544

Query: 543 LQLRQVVSESAVERLVMQY 561
           +  +         R+++ +
Sbjct: 545 MSSKGCAPNFVTYRVLINH 563



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 216/498 (43%), Gaps = 61/498 (12%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M + G++ D        + LCK+ K ++A+ ++E       +PD   YT +++ LC+   
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE---KEEFVPDTVLYTKMISGLCEASL 57

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              AM  + +M       N +TY  L+ G      L +  + L  +I +G  P+   ++ 
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE----------------- 251
           L+ A  +      A KLL  ++  G +P  V YN+L+ G+C                   
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 252 -----------------------GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
                                  G+ E+A    R++ SKGF P+  +Y+ ++  LC   +
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            E+A +L  EM     +P +  Y  LI S    G  + A    DEM +    P+  +Y  
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQ 407
           +I       KV    +  + M  + C PN  TY  L   LC  GK+++A  I + +  + 
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKEN 357

Query: 408 ----------------NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
                           ++ P  F Y  ++  LC+  +  +A  LL  M+  G  P+   Y
Sbjct: 358 VEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVY 417

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            +LI G C  G ++EA E+F  M E  Y P+V  +++L+  L K +R DL+L+V   M+E
Sbjct: 418 DALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477

Query: 511 KGQMPNETTYTILVEGIA 528
               PN   YT +++G+ 
Sbjct: 478 NSCAPNVVIYTEMIDGLC 495



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 200/416 (48%), Gaps = 22/416 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI-IPDA 133
           +  K++ A    E M+SKG  P++V  T L+  LCKA K++KA ++ ++M    + IPD 
Sbjct: 304 KSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDV 363

Query: 134 S----------------SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
                            +Y  LV+ LCK   V  A  L++ M   G   N V Y++L+ G
Sbjct: 364 DMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDG 423

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
            C  G L+++ +    +++ G  PN +TYS L++  +K++ +  A+K+L  ++     PN
Sbjct: 424 CCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPN 483

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           +V Y  ++ GLCK G+T+EA +    +  KG  PNVV+Y  ++      GR E+  ELL 
Sbjct: 484 VVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQ 543

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +M     +P  VTY +LI      G  D A K+L+EM +  +    A Y  +I     E 
Sbjct: 544 QMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREF 603

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQ--NSSPQEF 414
              L +    ++      P    Y  L       G+++ A  + + L +    +++ Q  
Sbjct: 604 IASLYLS--FEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNI 661

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           +  +I +L    K  +AF+L  +M   G  P+      LI+GL      EEAL++ 
Sbjct: 662 HITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 161/319 (50%), Gaps = 6/319 (1%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P+ V Y  +++GLC+    EEA+ F   + +    PNV++Y ILL     + +      +
Sbjct: 40  PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L+ M      P+   +N L+ +    G   +A K+L +MV+   +P    YN +I  +CS
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159

Query: 356 E---GK--VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
               GK  +DL  K   +M       N+   +  +  LCG+GK ++A+ +I+ + +K   
Sbjct: 160 SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFI 219

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  VI  LC   K  +AFQL  EM + G  PD Y Y++LI   C  G IE+A   
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNW 279

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  ME     P+V  + AL+    KSR+   + EV++MM+ KG  PN  TYT L++G+  
Sbjct: 280 FDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCK 339

Query: 530 QDELELSAEVLKELQLRQV 548
             ++E ++++ K ++   V
Sbjct: 340 AGKIEKASQIYKIMKKENV 358



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L +M+     P+VV  T ++  LCK  K  +A K+M MM   G  
Sbjct: 457 DRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCN 516

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT +++   K G V   ++L+++M   G   N VTY  L+   C  G L+++ + 
Sbjct: 517 PNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKL 576

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ + Q     +   Y  ++E   +E    A++ L  +I      P    Y VL+    K
Sbjct: 577 LEEMKQTYWPRHVAGYRKVIEGFNRE--FIASLYLSFEISENDSVPVAPVYRVLIDNFIK 634

Query: 251 EGRTEEAIRFFRDLPSKGFEP-NVVSYNI---LLRSLCMEGRWEEANELLAEMDGGDRSP 306
            GR E A+    +L S  F P +  + NI   L+ +L +  + ++A EL A+M      P
Sbjct: 635 AGRLEIALELNEELSS--FSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIP 692

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEM 334
            +     LI  L    + + AL++LD +
Sbjct: 693 ELSILVHLIKGLLRVNRWEEALQLLDSI 720


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 233/472 (49%), Gaps = 5/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + + A   L  M  +G  PDV     L+  L K   M  A+K+ + M   G+ PD +
Sbjct: 136 RKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 195

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
            Y  L++   KKG++  A ++ E++      YP N  +YN ++ GLC  G  ++S +   
Sbjct: 196 CYNILIDGFFKKGDILNASEIWERLLKGPSVYP-NIPSYNVMINGLCKCGKFDESFEIWH 254

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R+ +     + +TYS L+        +  A ++  ++   G  P++V YN +L G  + G
Sbjct: 255 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 314

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R EE +  ++ +  +G    VVSYNIL+R L    + +EA  +   +   D     +TY 
Sbjct: 315 RIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYG 373

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +L+  L  +G  + AL +L+E   GR      +Y+ +I  LC EG++D V   LDQM   
Sbjct: 374 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 433

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            CKPN    N  +       K+++A     ++ +K        Y  +I  L +  +  +A
Sbjct: 434 GCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 493

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           + L+ EM + G+ P+  TYS L+ GLC    ++ AL ++    E  +KPDV   N ++ G
Sbjct: 494 YALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 553

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           LC S + + +L+++  M ++  +PN  T+  L+EG     + E ++++   +
Sbjct: 554 LCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 605



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 221/447 (49%), Gaps = 5/447 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G +P +    +LL  L ++NK  +A        + G+ P+  +Y  L+   C+K     A
Sbjct: 84  GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            +L+  M   G+  +  +Y +L+  L   G ++ +L+  D + ++G+ P+   Y+ L++ 
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 203

Query: 213 AYKERGVHAAMKLLDDIIAKGGK--PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
            +K+  +  A ++ + ++ KG    PN+ SYNV++ GLCK G+ +E+   +  +      
Sbjct: 204 FFKKGDILNASEIWERLL-KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 262

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
            ++ +Y+ L+  LC  G  + A  +  EM     SP +V YN ++      G+ +  L++
Sbjct: 263 QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL 322

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
              M K   R +  SYN +I  L    KVD  +   + +  + C  +  TY  L   LC 
Sbjct: 323 WKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCK 381

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            G + +A +I++   N +       Y  +I  LCR+G+  +   +L +MTK+G  P+ Y 
Sbjct: 382 NGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYV 441

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
            +++I G      +E+AL  F  M      P V  +N L+ GL K+ R   +  + + M+
Sbjct: 442 CNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEML 501

Query: 510 EKGQMPNETTYTILVEGIAHQDELELS 536
           +KG  PN  TY++L+ G+    +L+++
Sbjct: 502 QKGWKPNMITYSLLMNGLCQGKKLDMA 528



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 196/418 (46%), Gaps = 3/418 (0%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G  P   SY  L+N L +      A       E  G   N  TYN L++  C     +++
Sbjct: 84  GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
            + L+ +  +G  P+ F+Y  L+ +  K   +  A+KL D++  +G  P++  YN+L+ G
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 203

Query: 248 LCKEGRTEEAIRFF-RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
             K+G    A   + R L      PN+ SYN+++  LC  G+++E+ E+   M   +R  
Sbjct: 204 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 263

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            + TY+ LI  L   G  D A +V  EM +    P    YN ++      G+++  ++  
Sbjct: 264 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 323

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             M    C+    +YN L   L    KV EA +I + L  K   +    Y  ++  LC+ 
Sbjct: 324 KVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 382

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A  +L E        D++ YSS+I GLC EG ++E   +   M ++  KP+    
Sbjct: 383 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVC 442

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           NA++ G  ++ + + +L  F  M+ KG  P   TY  L+ G++  +    +  ++KE+
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 166/316 (52%), Gaps = 7/316 (2%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G +P + SYN LL  L +  + +EA  FF    + G  PN+ +YNIL++  C + ++++A
Sbjct: 84  GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            ELL  M G   SP + +Y  LI SLA +G    ALK+ DEM +    P  A YN +I  
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 203

Query: 353 LCSEGKVDLVVKCLDQMFH-RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
              +G +    +  +++       PN  +YN +   LC  GK  E+F I   +  K+N  
Sbjct: 204 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM--KKNER 261

Query: 411 PQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
            Q+ Y Y  +I  LC  G    A ++  EM + G +PD   Y++++ G    G IEE LE
Sbjct: 262 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 321

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           ++ VME+   +  V ++N L+ GL ++ + D ++ +++++ EK    +  TY +LV G+ 
Sbjct: 322 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 380

Query: 529 HQDELELSAEVLKELQ 544
               L  +  +L+E +
Sbjct: 381 KNGYLNKALSILEEAE 396



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 192/426 (45%), Gaps = 42/426 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K +++F    RM       D+   + L++ LC +  +  A +V + M  +G+ PD   Y 
Sbjct: 245 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 304

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPT------------------------------- 166
            ++N   + G +   ++L + ME  G  T                               
Sbjct: 305 TMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKD 364

Query: 167 ---NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              +++TY  LV GLC  G LN++L  L+         + F YS ++    +E  +    
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 424

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            +LD +   G KPN    N ++ G  +  + E+A+RFF ++ SKG  P VV+YN L+  L
Sbjct: 425 GVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 484

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
               R+ EA  L+ EM      P ++TY++L+  L    K D AL +  + ++  F+P  
Sbjct: 485 SKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 544

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
             +N II  LCS GKV+  ++   +M  R C PN  T+N L  + G  KV++ F     +
Sbjct: 545 KMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTL--MEGFYKVRD-FERASKI 601

Query: 404 GNK--QNSSPQEFYKYVIT--SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG-LC 458
            +   Q     +   Y IT   LC   +   A   L +    G  P + T++ L++G L 
Sbjct: 602 WDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLA 661

Query: 459 MEGLIE 464
           ++G +E
Sbjct: 662 LKGYME 667



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 1/217 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL DA      MVSKG  P VV    L+  L KA +  +A  +++ M+  G  P+  
Sbjct: 451 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMI 510

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+N LC+   +  A+ L  +  + G+  +   +N ++ GLC  G +  +LQ    +
Sbjct: 511 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 570

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q+  VPN  T++ L+E  YK R    A K+ D I+  G +P+++SYN+ L GLC   R 
Sbjct: 571 KQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRI 630

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRS-LCMEGRWE 290
            +A+ F  D   +G  P  +++NIL++  L ++G  E
Sbjct: 631 SDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYME 667



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 128/251 (50%), Gaps = 5/251 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L++    L++M   G KP+      ++    +A+K++ A++    MVS G  P   
Sbjct: 416 REGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 475

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N L K      A  LV++M   G+  N +TY+ L+ GLC    L+ +L    + 
Sbjct: 476 TYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 535

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG  P+   ++ ++        V  A++L  ++  +   PNLV++N L+ G  K    
Sbjct: 536 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDF 595

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS--PTIVTYN 312
           E A + +  +   G +P+++SYNI L+ LC   R  +A   L   D  DR   PT +T+N
Sbjct: 596 ERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLN--DAVDRGVLPTAITWN 653

Query: 313 ILI-GSLAYHG 322
           IL+ G LA  G
Sbjct: 654 ILVQGYLALKG 664



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 63/133 (47%), Gaps = 2/133 (1%)

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           FQ ++E+  +G  P   +Y+SL+  L      +EA   F+  E     P++  +N L+  
Sbjct: 76  FQRMHEI--FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKI 133

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            C+ ++ D + E+   M  +G  P+  +Y  L+  +A    +  + ++  E+  R V  +
Sbjct: 134 SCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPD 193

Query: 552 SAVERLVMQYDFE 564
            A   +++   F+
Sbjct: 194 VACYNILIDGFFK 206


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 239/463 (51%), Gaps = 10/463 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQ----ATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASS 135
           D  L   R V++ H+ + +        LL  L KA +  +A ++  + ++      +  +
Sbjct: 48  DVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHIT 107

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L+   CK G++  A QL+ +M++ G+  + VT++S+V+ LC  GNL++++Q+    +
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV 167

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +    P++  ++ L+    K   +  A ++++++  +G  P++V+YN L+ GLCK  R E
Sbjct: 168 E--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRME 225

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA +    +  +   PN+V+YN L+   C  G    A++L+  M      P +VT+N LI
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLI 285

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                  K D A +VL  M KG   P+  +YN +I+ LC  G+ +   + L +M  R   
Sbjct: 286 SGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGIL 345

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQ 433
           P+  TYN L  + C   ++++AF I Q+L  ++   P    Y  +  +L +  +  +AF 
Sbjct: 346 PDIITYNSLIGIFCRNFQIEQAFQI-QNLMVERGVIPDGISYCTLAVALLKSERFDEAFA 404

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M   G  P+ +T++SL+ GLC    ++EA  +  VM      P    +  L+ GLC
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           K+ R D + EV  MM+ +G  P  ++   +V  +A + + +L+
Sbjct: 465 KAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLA 507



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 212/444 (47%), Gaps = 36/444 (8%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L  M  +GH PDVV  ++++  LC    + +A++     V     PD+  +  LV+
Sbjct: 124 AFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVH 181

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK   +  A Q++E+M + G   + VTYNSL+ GLC    + ++ Q L+ ++++ + P
Sbjct: 182 GLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRP 241

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L+    K      A +L++ +I  G  P++V++N L++G C++ + ++A    
Sbjct: 242 NLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVL 301

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +      PN+V+YN+L+  LC  GR  EA ELL+EMDG    P I+TYN LIG    +
Sbjct: 302 HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRN 361

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + + A ++ + MV+    P   SY  +   L    + D     LD MF     PN  T+
Sbjct: 362 FQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTF 421

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
           N L                                  +  LC   +  +A  LL  M + 
Sbjct: 422 NSL----------------------------------MEGLCCSRRLDEARHLLAVMRRV 447

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P + TY  L+ GLC  G +++A E+ V+M     +P V +   ++  L +  + DL+
Sbjct: 448 GCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLA 507

Query: 502 LEVFQMMIEKGQMPNETTYTILVE 525
           L  F  ++       + +Y  L+E
Sbjct: 508 LHYFDQVVAAESKACDPSYQKLLE 531



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 189/376 (50%), Gaps = 3/376 (0%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           TN +TYN+L+ G C  G++ ++ Q L  + ++G  P+  T+S +++A      +  AM+ 
Sbjct: 103 TNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQY 162

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
             + +     P+ V +N+L+ GLCK  +  EA +   ++  +G  P+VV+YN L+  LC 
Sbjct: 163 FRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCK 220

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
             R EEA +LL  M      P +VTYN LI      G T  A ++++ M++    P   +
Sbjct: 221 SYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVT 280

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG 404
           +N +I+  C + K+D   + L  M    C PN  TYN L + LC  G+  EA  ++  + 
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD 340

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            +        Y  +I   CR  +  QAFQ+   M + G  PD  +Y +L   L      +
Sbjct: 341 GRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFD 400

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA  +   M +    P++  FN+L+ GLC SRR D +  +  +M   G  P  +TY +LV
Sbjct: 401 EAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLV 460

Query: 525 EGIAHQDELELSAEVL 540
            G+     ++ + EVL
Sbjct: 461 TGLCKAGRVDDAKEVL 476



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 155/310 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + +++ +A   LE MV +  +P++V    L+Y  CK      A +++E M+ SG  PD  
Sbjct: 220 KSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVV 279

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++  C+K  +  A +++  M+      N VTYN L+ GLC  G  N++ + L  +
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM 339

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G++P+  TY+ L+    +   +  A ++ + ++ +G  P+ +SY  L   L K  R 
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA     ++   G  PN+ ++N L+  LC   R +EA  LLA M      P   TY +L
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVL 459

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G+ D A +VL  MV    +P  +S   I+  L  EGK DL +   DQ+     
Sbjct: 460 VTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAES 519

Query: 375 KPNEGTYNGL 384
           K  + +Y  L
Sbjct: 520 KACDPSYQKL 529



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 140/275 (50%), Gaps = 2/275 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +ERM+  G  PDVV   +L+   C+ +K+ KA +V+ +M      P+  +Y  L++ LC 
Sbjct: 266 IERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCD 325

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A +L+ +M+  G   + +TYNSL+   C    + Q+ Q  + ++++G++P+  +
Sbjct: 326 AGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS 385

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L  A  K      A  LLD++   G  PNL ++N L+ GLC   R +EA      + 
Sbjct: 386 YCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMR 445

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G +P   +Y +L+  LC  GR ++A E+L  M      P + +   ++ +LA  GK D
Sbjct: 446 RVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQD 505

Query: 326 HALKVLDEMVKGRFRPSAASYNPII--ARLCSEGK 358
            AL   D++V    +    SY  ++   ++  EGK
Sbjct: 506 LALHYFDQVVAAESKACDPSYQKLLEFVKVLREGK 540



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 184/365 (50%), Gaps = 8/365 (2%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSL---QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
           Y  N V  N++ R L ++ +++ SL   +++ R  +   + N FT + LL    K R  H
Sbjct: 28  YSRNLVP-NTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHH 86

Query: 221 AAMKLL-DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
            A ++  D+++ +    N ++YN L+ G CK G  E A +   ++  +G  P+VV+++ +
Sbjct: 87  QAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSI 146

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +++LC  G    A +   E    + +P  V +NIL+  L    +   A ++++EM +   
Sbjct: 147 VQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGI 204

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
            P   +YN +I  LC   +++   + L+ M  R+ +PN  TYN L    C  G    A  
Sbjct: 205 VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQ 264

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +I+ +           +  +I+  C+K K  +A ++L+ M K    P+  TY+ LI GLC
Sbjct: 265 LIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLC 324

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G   EA E+   M+     PD+  +N+L+   C++ + + + ++  +M+E+G +P+  
Sbjct: 325 DAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGI 384

Query: 519 TYTIL 523
           +Y  L
Sbjct: 385 SYCTL 389



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 4/282 (1%)

Query: 272 NVVSYNILLRSLCMEGRWEEANELLA-EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           N  + N LLR+L    R  +A ++   E+ G       +TYN LIG     G  + A ++
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
           L EM +    P   +++ I+  LC+ G +   ++   +     C P+   +N L   LC 
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCK 185

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
             ++ EA  +I+ +  +        Y  +I  LC+  +  +A QLL  M K    P+  T
Sbjct: 186 ANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVT 245

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y++LI G C  G    A ++   M +    PDV  FN+L+ G C+  + D + EV  +M 
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK 305

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +    PN  TY +L+ G+        + E+L E+  R ++ +
Sbjct: 306 KGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPD 347



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 6/206 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + N+A   L  M  +G  PD++   +L+   C+  ++++A ++  +MV  G+IPD  SY 
Sbjct: 328 RANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYC 387

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L   L K      A  L++ M D G   N  T+NSL+ GLC    L+++   L  + + 
Sbjct: 388 TLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRV 447

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P A TY  L+    K   V  A ++L  ++++G +P + S   ++  L +EG+ + A
Sbjct: 448 GCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLA 507

Query: 258 IRFFRDL---PSKGFEPNVVSYNILL 280
           + +F  +    SK  +P   SY  LL
Sbjct: 508 LHYFDQVVAAESKACDP---SYQKLL 530



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 2/182 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++  AF     MV +G  PD +    L   L K+ +  +A  +++ M  +G IP+  
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLF 419

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+  LC    +  A  L+  M   G      TY  LV GLC  G ++ + + L  +
Sbjct: 420 TFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMM 479

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL--TGLCKEG 252
           + +G+ P   +   ++    +E     A+   D ++A   K    SY  LL    + +EG
Sbjct: 480 VSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFVKVLREG 539

Query: 253 RT 254
           ++
Sbjct: 540 KS 541


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 234/485 (48%), Gaps = 18/485 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++  A   ++RMV +GH+PD V    ++  +CK      A+ ++  M  S I  +  
Sbjct: 22  REGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVV 81

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y+ +V+ LCK GN   A  +  +M + G   N +TYN ++ G C  G  + + Q L  +
Sbjct: 82  IYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDM 141

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I++ + P+  T+S L+ A  KE  V  A +L  +++ +   P  ++Y+ ++ G CK  R 
Sbjct: 142 IERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRL 201

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNI-----------LLRSLCMEGRWEEANELLAEMDGGD 303
           E+A   F  + SKG  P++++ N            L+   C  G    A +L  EM    
Sbjct: 202 EDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNG 261

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
            SP IVT N L+  L  +GK + AL++     K +     A+ N II  +C   KVD   
Sbjct: 262 VSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAW 321

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGV----GKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
              + +     + +  TYN   +L GV    G    A  I   +  K        Y  ++
Sbjct: 322 DLFNSLPVNGVETDVVTYN---ILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMV 378

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              C++ +  +A Q++  M   G +PD  T+S+LI+G C  G +++ LE+F  M +    
Sbjct: 379 DGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLV 438

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
            D   +NAL+ G CK    + + ++F+ M+  G  P+  T+  ++ G+  + EL+    +
Sbjct: 439 ADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTM 498

Query: 540 LKELQ 544
           L++LQ
Sbjct: 499 LEDLQ 503



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 226/480 (47%), Gaps = 12/480 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV  G   +VV  T L+  LC+  ++ +A+ +++ MV  G  PDA +Y  +VN +CK G+
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ ++ KM++     N V Y+++V  LC  GN  ++      + +KG+ PN  TY+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +++          A +LL D+I +   P++V+++ L+    KEG+   A   +R++  + 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH------- 321
             P  ++Y+ ++   C   R E+A  +   M     SP I+T N LI             
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 322 ----GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  + A  +  EM+     P   + N ++A LC  GK++  ++        +   +
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T N +   +C   KV EA+ +  SL      +    Y  +I    ++G   +A  +  
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G  P + TY+S++ G C +  +EEA ++   M      PDV  F+ L+ G CK+ 
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           R D  LE+F  M ++G + +  TY  L+ G     +L  + ++ +E+    V  ++   R
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFR 480



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 130/251 (51%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M+S G  PD+V    LL  LC+  K++KA+++ ++   S +  D ++   ++N +CK
Sbjct: 254 FQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCK 313

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A  L   +   G  T+ VTYN L+      GN  ++      ++ KG++P+  T
Sbjct: 314 GNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVT 373

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++   K+  +  A +++D ++++G  P++V+++ L+ G CK GR ++ +  F ++ 
Sbjct: 374 YNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMC 433

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G   + ++YN L+   C  G    A ++  EM      P  +T+  ++  L    +  
Sbjct: 434 QRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQ 493

Query: 326 HALKVLDEMVK 336
             L +L+++ K
Sbjct: 494 KGLTMLEDLQK 504



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 149/343 (43%), Gaps = 45/343 (13%)

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           ++  G   N+V++  L+ GLC+EGR  +A+     +  +G +P+ V+Y  ++  +C  G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
              A  +L +MD       +V Y+ ++  L   G    A  +  EM +    P+  +YN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN 408
           +I   CS GK     + L  M  R   P+  T++ L                        
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSAL------------------------ 156

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                     I +  ++GK   A +L  EM +    P + TYSS+I G C    +E+A  
Sbjct: 157 ----------INAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKH 206

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRR-----------TDLSLEVFQMMIEKGQMPNE 517
           +F +M      PD+   N L+ G C+++R            +++ ++FQ MI  G  P+ 
Sbjct: 207 MFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDI 266

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            T   L+ G+    +LE + E+ K  Q  ++  ++A   +++ 
Sbjct: 267 VTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIIN 309


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 226/470 (48%), Gaps = 20/470 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   + +M   G  P V+  T L+   CK ++   A ++ EMM  +G+ PD  
Sbjct: 509 QDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ 568

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L + LCK G    A   + K    G     VTY SLV G    GN   +   ++++
Sbjct: 569 AYNVLTDALCKSGRAEEAYSFLVKK---GVVLTKVTYTSLVDGFSKAGNTEFAAALIEKM 625

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G   ++ TYS LL+A  K++ ++ A+ +LD +  +G K N+V+Y ++++ + KEG+ 
Sbjct: 626 VNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKH 685

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A   F ++ S G +P+ ++Y + + S C  GR EEA  L+ EM+    +P +VTYN+ 
Sbjct: 686 DHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVF 745

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR----------------LCSEGK 358
           I    + G  D A   L  M+     P+  +Y  ++                  + +  K
Sbjct: 746 INGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIK 805

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +D V + L++M      P   TY+ + A  C   +++EA  ++  +  K  S  +E Y  
Sbjct: 806 LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTM 865

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C      +A   +  M + GF P   +Y  LI GLC EG  ++A  +F  + E D
Sbjct: 866 LIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMD 925

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           Y  +   +  L  GL K+   D+  ++   M  +    +  TY+++   I
Sbjct: 926 YNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNI 975



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 234/475 (49%), Gaps = 7/475 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           ++V +G  PD V    ++   CK   +  A +   ++  SG+  D  +   L+   C+ G
Sbjct: 173 QLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTG 232

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           ++  A  L+  M   G   N  +Y  L++GLC    + ++L  L  ++Q G  PN  TY+
Sbjct: 233 DLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYT 292

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    KE  +H A  LLD++  +G  P++ +YN ++ G CK GR ++A+     +   
Sbjct: 293 LLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGN 352

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+  +YN L+  LC  G+ +EA ELL        SPT++T+  +I       K D A
Sbjct: 353 GCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDA 411

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
           L+V   M+  + +    +Y  +I+ L  + ++      L+++F     PN   Y  +   
Sbjct: 412 LRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDA 471

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            C VGKV  A  + + L   +   P  + Y  +I  L +  K ++A  L+ +M + G TP
Sbjct: 472 YCKVGKVGAALEVFK-LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 530

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
              TY++LI+G C +   + A  +F +ME+    PD   +N L   LCKS R +   E +
Sbjct: 531 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE---EAY 587

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
             +++KG +  + TYT LV+G +     E +A +++++      ++S    +++Q
Sbjct: 588 SFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQ 642



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 220/484 (45%), Gaps = 20/484 (4%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           +G +P+    ++L+Y L +  K+ KA+ ++  M   GI P   +YT L+   CKK     
Sbjct: 491 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 550

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A +L E ME  G   +   YN L   LC  G   ++  FL   ++KG+V    TY+ L++
Sbjct: 551 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVD 607

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K      A  L++ ++ +G K +  +Y+VLL  LCK+ +  EA+     +  +G + 
Sbjct: 608 GFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKG 667

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N+V+Y I++  +  EG+ + A  +  EM      P+ +TY + I S    G+ + A  ++
Sbjct: 668 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLI 727

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL------- 384
            EM +    P   +YN  I      G +D     L +M    C+PN  TY  L       
Sbjct: 728 GEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKM 787

Query: 385 ----------AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                     + +    K+   + +++ +     +     Y  +I   C+  +  +A  L
Sbjct: 788 SLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVL 847

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L  M     +P+   Y+ LI+  C   L E+A      M E  ++P +++++ L+ GLC 
Sbjct: 848 LDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCD 907

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
               D +  +F  ++E     NE  + IL +G+     +++ +++L  ++ R    +S  
Sbjct: 908 EGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSET 967

Query: 555 ERLV 558
             +V
Sbjct: 968 YSMV 971



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 219/475 (46%), Gaps = 20/475 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L   +++G  P V+  TN++   CKA K+  A++V  +M+SS    D  +Y  L++ L K
Sbjct: 380 LNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIK 439

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           K  +  A   + ++   G   N V Y S++   C +G +  +L+       +G  PNA+T
Sbjct: 440 KHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWT 499

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS L+    +++ +H AM L+  +   G  P +++Y  L+ G CK+   + A R F  + 
Sbjct: 500 YSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMME 559

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+  +YN+L  +LC  GR EEA   L +        T VTY  L+   +  G T+
Sbjct: 560 QNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTSLVDGFSKAGNTE 616

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GL 384
            A  ++++MV    +  + +Y+ ++  LC + K++  +  LDQM  R  K N   Y   +
Sbjct: 617 FAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIII 676

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
           + +   GK   A ++   + +  +      Y   I+S C+ G+  +A  L+ EM + G  
Sbjct: 677 SEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVA 736

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL--------------- 489
           PD  TY+  I G    G ++ A      M +   +P+   +  LL               
Sbjct: 737 PDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVD 796

Query: 490 -LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             G+    + D   ++ + M++ G  P   TY+ ++ G      LE +  +L  +
Sbjct: 797 TSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHM 851



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 229/487 (47%), Gaps = 22/487 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + H+L +A   L  + + G  P+VV  T+++   CK  K+  A++V ++    G  P+A 
Sbjct: 439 KKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAW 498

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+  L +   +  AM L+ KM++ G     +TY +L++G C     + + +  + +
Sbjct: 499 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 558

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q GL P+   Y+ L +A  K      A   L   + KG     V+Y  L+ G  K G T
Sbjct: 559 EQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAGNT 615

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A      + ++G + +  +Y++LL++LC + +  EA  +L +M        IV Y I+
Sbjct: 616 EFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTII 675

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +   GK DHA  + +EM+    +PSA +Y   I+  C  G+++     + +M     
Sbjct: 676 ISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGV 735

Query: 375 KPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSP---------QEFYK-------Y 417
            P+  TYN     CG +G +  AF+ ++ + +  +  P         + F K       Y
Sbjct: 736 APDVVTYNVFINGCGHMGYMDCAFSTLKRMID-ASCEPNYWTYWLLLKHFLKMSLANAHY 794

Query: 418 VITS-LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
           V TS +    K    +QLL  M K+G  P + TYSS+I G C    +EEA  +   M   
Sbjct: 795 VDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGK 854

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           D  P+ + +  L+   C  +  + +      MIE G  P+  +Y  L+ G+  + + + +
Sbjct: 855 DISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKA 914

Query: 537 AEVLKEL 543
             +  +L
Sbjct: 915 KALFCDL 921



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 221/474 (46%), Gaps = 5/474 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + +A + L  M+  G  P++   T L+  LCK  ++  A  +++ M   G++P   +Y  
Sbjct: 269 VREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNA 328

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++  CK G +  A+ +   ME  G   +  TYNSL+ GLC  G  +++ + L+  I +G
Sbjct: 329 MIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARG 387

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P   T++ ++    K   +  A+++   +I+   K +L +Y VL++ L K+ R +EA 
Sbjct: 388 FSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAK 447

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
               ++ + G  PNVV Y  ++ + C  G+   A E+    +     P   TY+ LI  L
Sbjct: 448 DTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGL 507

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               K   A+ ++ +M +    P   +Y  +I   C + + D   +  + M      P+E
Sbjct: 508 IQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 567

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             YN L   LC  G+ +EA++    L  K     +  Y  ++    + G T  A  L+ +
Sbjct: 568 QAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEK 624

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G   DS+TYS L++ LC +  + EAL I   M     K ++  +  ++  + K  +
Sbjct: 625 MVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGK 684

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            D +  +F  MI  G  P+  TYT+ +        +E +  ++ E++   V  +
Sbjct: 685 HDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPD 738



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 171/399 (42%), Gaps = 35/399 (8%)

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN  +R L          +   +L+Q+GL+P+  TY+ ++ A  KE  +  A +    + 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
             G + +  + N LL G C+ G   +A      +P  G   N  SY IL++ LC      
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           EA  LL  M     SP + TY +LI  L   G+   A  +LDEM +    PS  +YN +I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG-------------------- 389
              C  G++   +     M    C P++ TYN L   LCG                    
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSP 390

Query: 390 --------------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
                           K+ +A  +   + + +     + Y  +I+ L +K +  +A   L
Sbjct: 391 TVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTL 450

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            E+   G +P+   Y+S+I   C  G +  ALE+F + E    +P+   +++L+ GL + 
Sbjct: 451 NEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQD 510

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           ++   ++ +   M E G  P   TYT L++G   + E +
Sbjct: 511 QKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 549



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 162/359 (45%), Gaps = 8/359 (2%)

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           ++Q + R   K L  +   Y+  L +  +        KL   ++ +G  P+ V+YN ++ 
Sbjct: 132 AIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIM 191

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
             CKEG    A R+FR L   G E +  + N LL   C  G   +A  LL  M       
Sbjct: 192 AYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRR 251

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
              +Y ILI  L        AL +L  M++    P+  +Y  +I  LC EG++      L
Sbjct: 252 NEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLL 311

Query: 367 DQMFHRRCKPNEGTYNGLAML---CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSL 422
           D+M  R   P+  TYN  AM+   C  G++++A   I++L      +P ++ Y  +I  L
Sbjct: 312 DEMPRRGVVPSVWTYN--AMIDGYCKSGRLKDALG-IKTLMEGNGCNPDDWTYNSLIHGL 368

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C  GK  +A +LL      GF+P   T++++I G C    I++AL +  +M     K D+
Sbjct: 369 C-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
             +  L+  L K  R   + +    +   G  PN   YT +++      ++  + EV K
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK 486



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 4/318 (1%)

Query: 220 HAAM-KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE-EAIRFFRDLPSKGFEPNVVSYN 277
           HAA+ +LL    A      LV   +  +G  ++ R   +AI+  R    K    +   YN
Sbjct: 93  HAALLQLLARRRAPANYDKLVVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYN 152

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
           + LRSL      E   +L +++      P  VTYN +I +    G    A +    + + 
Sbjct: 153 LALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRES 212

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA 396
                  + N ++   C  G +      L  M    C+ NE +Y  L   LC    V+EA
Sbjct: 213 GMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREA 272

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             ++  +     S     Y  +I  LC++G+ + A  LL EM + G  P  +TY+++I G
Sbjct: 273 LVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDG 332

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            C  G +++AL I  +ME     PD   +N+L+ GLC   + D + E+    I +G  P 
Sbjct: 333 YCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGG-KPDEAEELLNGAIARGFSPT 391

Query: 517 ETTYTILVEGIAHQDELE 534
             T+T ++ G    ++++
Sbjct: 392 VITFTNIINGYCKAEKID 409



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 64/143 (44%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A + L+ M+ K   P+    T L+   C     +KA   +  M+  G  P   SY 
Sbjct: 840 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYH 899

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           YL+  LC +G+   A  L   + +  Y  N V +  L  GL   G+++   Q L  +  +
Sbjct: 900 YLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENR 959

Query: 198 GLVPNAFTYSFLLEAAYKERGVH 220
               ++ TYS +    ++  G++
Sbjct: 960 HCRIDSETYSMVTNNIHEASGMY 982


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 242/480 (50%), Gaps = 16/480 (3%)

Query: 97  DVVQATNLLYDLCKANKMKKA---IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           D V    +L  LC+     +A   ++ M +       P+A SYT L+  LC       A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            L+  M   G   + VTY +L+RGLC    ++++++ +  + + G+ PN   YS LL+  
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K        K+  ++  KG +P++V Y  L+  LCK G+ ++A      +  +G EPNV
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V+YN+L+  +C EG  +EA  +L +M     +P +VTYN LI  L+   + D A+ +L+E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 334 MVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAML 387
           MV+G+   +P+  ++N +I  LC  G++    +    M    C  N  TYN    GL  +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
             V K  E    + SLG +    P  F Y  +I   C+  +  +A  LL  M   G  P+
Sbjct: 376 HKVRKAMELMDEMTSLGLE----PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            + Y  L+  +C +G++E A  +F  M+  ++  DV  ++ ++ G CK+     + E+ +
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV-ERLVMQYDFEG 565
            ++++G  P+  TY+I++   A   ++E +  VLK++     + + AV + L+  Y  +G
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKG 550



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 215/442 (48%), Gaps = 10/442 (2%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D   + A   L  M S G + DVV    L+  LC A ++ KA+++M  M  SGI P+   
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y+ L+   CK G      ++  +M + G   + V Y  L+  LC +G   ++   +D ++
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++GL PN  TY+ L+    KE  V  A+ +L  +  KG  P++V+YN L+ GL      +
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307

Query: 256 EAIRFFRDLPSKG---FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           EA+    ++  +G    +PNVV++N +++ LC  GR  +A ++ A M+       +VTYN
Sbjct: 308 EAMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +LIG L    K   A++++DEM      P + +Y+ +I   C   +VD     L  M  R
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTY 429
             +P    Y  L + +C  G ++ A  +   +    N+ P +   Y  +I   C+ G   
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEM---DNNFPLDVVAYSTMIHGACKAGDLK 483

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +LL  +   G TPD+ TYS +I      G +E A  +   M    + PDV  F++L+
Sbjct: 484 TAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543

Query: 490 LGLCKSRRTDLSLEVFQMMIEK 511
            G       +  LE+ + MI K
Sbjct: 544 QGYSTKGEINKVLELIREMITK 565



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 232/464 (50%), Gaps = 6/464 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           +P+ V  T L+  LC      +A+ ++  M S+G+  D  +Y  L+  LC    V  A++
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L+ +M + G   N V Y+SL++G C  G      +    + +KG+ P+   Y+ L+++  
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K      A  ++D ++ +G +PN+V+YNVL+  +CKEG  +EAI   + +  KG  P+VV
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILIGSLAYHGKTDHALKVLD 332
           +YN L++ L      +EA  LL EM  G     P +VT+N +I  L   G+   A +V  
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
            M +     +  +YN +I  L    KV   ++ +D+M     +P+  TY+ L    C + 
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW 411

Query: 392 KVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           +V  A  ++ ++ ++    P+ F Y  ++ ++C +G   +A  L  EM    F  D   Y
Sbjct: 412 QVDRAEDLLSTMRDR-GIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAY 469

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S++I G C  G ++ A E+   + +    PD   ++ ++    KS   + +  V + M  
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            G +P+   +  L++G + + E+    E+++E+  + +  +S +
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKI 573



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 181/358 (50%), Gaps = 13/358 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII--PD 132
           ++  + +A   L++M  KG  PDVV    L+  L    +M +A+ ++E MV    I  P+
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             ++  ++  LC  G +  A Q+   ME+ G   N VTYN L+ GL  +  + ++++ +D
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +   GL P++FTYS L++   K   V  A  LL  +  +G +P L  Y  LL  +C++G
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             E A   F ++ +  F  +VV+Y+ ++   C  G  + A ELL  +     +P  VTY+
Sbjct: 447 MMERARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYS 505

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I+I   A  G  + A  VL +M    F P  A ++ +I    ++G+++ V++ + +M  +
Sbjct: 506 IVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN------KQN-SSPQEFYKYVITSLC 423
               +    + L+    +    E  A++QSL +      K N +SPQE  K V+ ++C
Sbjct: 566 NIALDSKIISTLS--TSLVASNEGKALLQSLPDFSAEISKGNINSPQELMK-VLHNVC 620


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 229/475 (48%), Gaps = 36/475 (7%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E   S G KPD      ++  LC    +     V+  M+  G+ P   ++T L+N LC K
Sbjct: 100 EMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVK 159

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G+VG A++LV+ +E  GY ++  TY  L+ GLC +G  ++++ +L ++            
Sbjct: 160 GDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKM------------ 207

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
                   +ER  +               PN+V Y+ ++ GLCK+G   EA+    ++  
Sbjct: 208 --------EERNWN---------------PNVVVYSTVMDGLCKDGLVSEALGLCLEMSG 244

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG +PN+V+Y  L++ LC  GRW+EA  LL EM      P + + NIL+  L   GK   
Sbjct: 245 KGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQ 304

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A  V+  M+     P   +YN +I R C + ++D   +  + M  R C P+   Y  L  
Sbjct: 305 AKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIH 364

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C +  + +A  ++  +     +     +  +I   C+ G+   A +L   M KYG  P
Sbjct: 365 GWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVP 424

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  T + ++ GLC   L+ EAL +F  ME+ +   ++  ++ +L G+C + + + +LE+F
Sbjct: 425 NLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELF 484

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
             +  KG   N   YTI++ G A Q  L+ + ++L  ++    + +S    + +Q
Sbjct: 485 SCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQ 539



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 155/312 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +++A      M  KG KP++V  T L+  LC   + K+A  +++ M+  G++
Sbjct: 224 DGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVM 283

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  S   LV+ LCK+G +  A  ++  M   G   +  TYNSL+   C+   ++++ + 
Sbjct: 284 PDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRV 343

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + ++ +G +P+   Y+ L+    K + ++ AM LLD++I  G  P++V++  L+ G C+
Sbjct: 344 FELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQ 403

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR   A   F ++   G  PN+ +  I+L  LC      EA  L   M+  +    IV 
Sbjct: 404 VGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVI 463

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+I++  +   GK + AL++   +     + +  +Y  +I     +G +D     L  M 
Sbjct: 464 YSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNME 523

Query: 371 HRRCKPNEGTYN 382
              C P+  TYN
Sbjct: 524 ENGCMPDSCTYN 535



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 142/283 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+  A   +  M+  G  PDV    +L+   C  N+M +A +V E+MVS G +
Sbjct: 294 DVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCL 353

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L++  CK  N+  AM L+++M   G+  + VT+ +L+ G C +G    + + 
Sbjct: 354 PDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKEL 413

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + + G VPN  T + +L+   K + +  A+ L   +       N+V Y+++L G+C 
Sbjct: 414 FLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCS 473

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+   A+  F  LP+KG + NV +Y I++     +G  ++A +LL+ M+     P   T
Sbjct: 474 AGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCT 533

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           YN+ +  L    +   ++K L  M    F   A +   II  L
Sbjct: 534 YNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 179/404 (44%), Gaps = 34/404 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A   L +M  +   P+VV  + ++  LCK   + +A+ +   M   GI P+  +YT
Sbjct: 196 KTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYT 255

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC  G    A  L+++M   G   +  + N LV  LC  G + Q+   +  +I  
Sbjct: 256 CLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILV 315

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G VP+ FTY+ L++    +  +  A ++ + ++++G  P++V+Y  L+ G CK     +A
Sbjct: 316 GEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKA 375

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++   GF P+VV++  L+   C  GR   A EL   M    + P + T  I++  
Sbjct: 376 MHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDG 435

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L        AL +   M K     +   Y+ I+  +CS GK++  +              
Sbjct: 436 LCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTAL-------------- 481

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                            E F+ + + G + N      Y  +I    ++G   +A  LL  
Sbjct: 482 -----------------ELFSCLPAKGLQINVYA---YTIMINGFAKQGLLDKAEDLLSN 521

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           M + G  PDS TY+  ++GL  E  I  +++   +M +  +  D
Sbjct: 522 MEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVD 565



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 119/243 (48%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++++A    E MVS+G  PD+V  T+L++  CK   + KA+ +++ M+  G  PD  ++
Sbjct: 335 NQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTW 394

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+   C+ G    A +L   M  YG   N  T   ++ GLC    L+++L     + +
Sbjct: 395 TTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEK 454

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             L  N   YS +L+       ++ A++L   + AKG + N+ +Y +++ G  K+G  ++
Sbjct: 455 SNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDK 514

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++   G  P+  +YN+ ++ L  E     + + L  M     S    T  ++I 
Sbjct: 515 AEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIIN 574

Query: 317 SLA 319
            L+
Sbjct: 575 YLS 577



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 100/218 (45%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N A   L+ M+  G  PDVV  T L+   C+  +   A ++   M   G +P+  +   
Sbjct: 372 INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAI 431

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++ LCK   +  A+ L   ME      N V Y+ ++ G+C  G LN +L+    L  KG
Sbjct: 432 ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKG 491

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L  N + Y+ ++    K+  +  A  LL ++   G  P+  +YNV + GL  E     +I
Sbjct: 492 LQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSI 551

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           ++   +  KGF  +  +  +++  L       E  E L
Sbjct: 552 KYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 226/456 (49%), Gaps = 11/456 (2%)

Query: 84  LQLERMVSKGH---KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           L L RM++K      PDVV    +++   K  K+ KA  +   M+  G +PD  ++  ++
Sbjct: 99  LDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSII 158

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N LCK   V  A  L+ +M D G P N VTY S++ G   LG   ++ +    +  +GL+
Sbjct: 159 NALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLI 218

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  +++  +++  K      A ++   + AKG +PN+V+Y +LL G   EG   + + F
Sbjct: 219 PDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSF 278

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +   G   N + + IL+ +    G  +EA  +L+EM G   SP + TY+ LI +L  
Sbjct: 279 FNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCR 338

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQMFHRRCKP 376
            G+   A+   ++M+    +P+   Y+ +I   C+ G +    +LV + ++    R   P
Sbjct: 339 MGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPR---P 395

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N   +N +   +C  G+V +A  I   + +    S    +  +I   C  G+  +AF +L
Sbjct: 396 NIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVL 455

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M   G  PD++TY++L+ G    G I++ L +F  M +   KP    +N +L GL ++
Sbjct: 456 DAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRA 515

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            RT  + ++   MI  G   +  TY I+++G+   +
Sbjct: 516 GRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNN 551



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 228/502 (45%), Gaps = 7/502 (1%)

Query: 69  NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSS 127
           N   R R  +L  AF    R++  G K D   A  +L  LC   +   A+KV+   M   
Sbjct: 16  NGCCRARRPELGLAFFG--RLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTEL 73

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLN 185
           G +PDA SY  ++  LC       A+ L+  M  E+     + VTYN+++ G    G + 
Sbjct: 74  GCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIG 133

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           ++      ++Q+G VP+  T++ ++ A  K R V  A  LL  ++  G  PN V+Y  ++
Sbjct: 134 KACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMI 193

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G    GR EEA + FR++  +G  P++VS+N  + SLC  GR +EA E+   M      
Sbjct: 194 HGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHR 253

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P IVTY IL+   A  G     +   + M       +   +  +I      G +D  +  
Sbjct: 254 PNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLI 313

Query: 366 LDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L +M  +   P+  TY+ L + LC +G++ +A      +           Y  +I   C 
Sbjct: 314 LSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCT 373

Query: 425 KGKTYQAFQLLYEMTKYGF-TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            G   +A +L+YEM   G   P+   ++S++  +C EG + +A  IF ++++   + D+ 
Sbjct: 374 HGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDII 433

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            FN L+ G C       +  V   MI  G  P+  TY  LV G      ++    + +E+
Sbjct: 434 MFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREM 493

Query: 544 QLRQVVSESAVERLVMQYDFEG 565
             +++   +    +++   F  
Sbjct: 494 SDKKIKPTTVTYNIILDGLFRA 515



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 226/468 (48%), Gaps = 2/468 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A L L +MV  G  P+ V  T++++      + ++A K+   M   G+IPD  S+  
Sbjct: 167 VDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNS 226

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            ++ LCK G    A ++   M   G+  N VTY  L+ G    G     + F + +   G
Sbjct: 227 FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDG 286

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +V N   ++ L++A  K   +  AM +L ++  +G  P++ +Y+ L++ LC+ GR  +A+
Sbjct: 287 IVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAV 346

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGS 317
             F  +   G +PN V Y+ L++  C  G   +A EL+ EM + G   P I  +N ++ S
Sbjct: 347 DKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHS 406

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           +   G+   A  + D +     R     +N +I   C  G++      LD M      P+
Sbjct: 407 ICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPD 466

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L       G++ +   + + + +K+       Y  ++  L R G+T  A ++L+
Sbjct: 467 TFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLH 526

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G T    TY+ +++GLC     +EA+ +F  +   + K ++   N ++  +   +
Sbjct: 527 EMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQ 586

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           R + + ++F  + + G +PN +TY I++  +  +  +E +  +   ++
Sbjct: 587 RREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSME 634



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 191/462 (41%), Gaps = 91/462 (19%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL------------------------- 199
           P    TY  ++ G C        L F  RL++ GL                         
Sbjct: 5   PPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVK 64

Query: 200 -----------VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG--KPNLVSYNVLLT 246
                      VP+AF+Y+ +L+    +     A+ LL  +  + G   P++V+YN ++ 
Sbjct: 65  VLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME-------------------- 286
           G  KEG+  +A   + ++  +GF P+VV++N ++ +LC                      
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184

Query: 287 ---------------GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
                          GRWEEA ++  EM G    P IV++N  + SL  HG++  A ++ 
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM--FHRRCKPNEGTYNGLAMLCG 389
             M     RP+  +Y  ++    +EG       C   M  F    K +    N L     
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEG-------CFADMMSFFNTMKGDGIVANCLVFTIL 297

Query: 390 V------GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           +      G + EA  I+  +   Q  SP  F Y  +I++LCR G+   A     +M   G
Sbjct: 298 IDAYAKRGMMDEAMLILSEM-QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALE-IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
             P++  Y SLI+G C  G + +A E ++ +M     +P++  FN+++  +CK  R   +
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDA 416

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +F ++ + G+  +   +  L++G     E+  +  VL  +
Sbjct: 417 HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAM 458



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 154/303 (50%), Gaps = 1/303 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDA 133
           R  +L DA  +  +M+  G +P+ V   +L+   C    + KA +++  M+++GI  P+ 
Sbjct: 338 RMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNI 397

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           + +  +V+ +CK+G V  A  + + ++D G  ++ + +N+L+ G C++G + ++   LD 
Sbjct: 398 AFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDA 457

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +I  G+ P+ FTY+ L+   +K   +   + L  ++  K  KP  V+YN++L GL + GR
Sbjct: 458 MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGR 517

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A +   ++   G   ++ +YNI+L+ LC     +EA  +  ++   +    I T N 
Sbjct: 518 TVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNT 577

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I S+    + + A  +   +      P+A++Y  +I  L  EG V+        M    
Sbjct: 578 MINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637

Query: 374 CKP 376
           C P
Sbjct: 638 CAP 640



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 125/285 (43%), Gaps = 35/285 (12%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ DA    + +   G + D++    L+   C   +M KA  V++ M+S+GI PD  
Sbjct: 409 KEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTF 468

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  LVN   K G +   + L  +M D      TVTYN ++ GL   G            
Sbjct: 469 TYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAG------------ 516

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                                 R V A  K+L ++I  G   +L +YN++L GLC+   T
Sbjct: 517 ----------------------RTVAAQ-KMLHEMIGCGTTVSLPTYNIILKGLCRNNCT 553

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI  F+ L +   + N+ + N ++ S+    R EEA +L + +      P   TY I+
Sbjct: 554 DEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIM 613

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           I +L   G  + A  +   M K    P +   N  I  L  +G++
Sbjct: 614 IRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEI 658



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 35/248 (14%)

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           PTI TY +++       + +  L     +++   +    + N ++  LC   + D  VK 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 366 LDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           L                 L  +  +G V +AF+                Y  V+  LC  
Sbjct: 66  L-----------------LRRMTELGCVPDAFS----------------YAIVLKRLCDD 92

Query: 426 GKTYQAFQLLYEMTKYG--FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            ++ QA  LL  M K     +PD  TY+++I G   EG I +A  ++  M +  + PDV 
Sbjct: 93  NRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVV 152

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             N+++  LCK+R  D +  + + M++ G  PN+ TYT ++ G +     E + ++ +E+
Sbjct: 153 THNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREM 212

Query: 544 QLRQVVSE 551
             R ++ +
Sbjct: 213 TGRGLIPD 220


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 234/488 (47%), Gaps = 27/488 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   + +M   G  P V+  T L+   CK ++   A ++ EMM  +G+ PD  
Sbjct: 505 QDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ 564

Query: 135 SYTYLVNCLCKKGNVGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +Y  L + LCK G    A   LV K    G     VTY SLV G    GN + +   +++
Sbjct: 565 AYNVLTDALCKSGRAEEAYSFLVRK----GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK 620

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ +G   + +TYS LL+A  K++ ++ A+ +LD +   G K N+V+Y ++++ + KEG+
Sbjct: 621 MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F ++ S G +P+  +Y + + S C  GR EEA  L+ EM+    +P +VTYNI
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNI 740

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR----------------LCSEG 357
            I    + G  D A   L  MV     P+  +Y  ++                  + +  
Sbjct: 741 FINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWI 800

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           ++++V + L++M      P   TY+ + A  C   +++EA  ++  +  K  S  +E Y 
Sbjct: 801 ELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYT 860

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I   C      +A   + +M ++GF P   +Y  LI GLC EG  + A  +F  +   
Sbjct: 861 MLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGM 920

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           DY  +   +  L  GL K+   D   ++   M  +    +  +Y++L + I      E S
Sbjct: 921 DYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIR-----EAS 975

Query: 537 AEVLKELQ 544
             V+ EL+
Sbjct: 976 GSVVSELR 983



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 225/483 (46%), Gaps = 20/483 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL++A   L   +++G  P V+  TNL+   CKA ++  A++V   M+SS    D  +Y 
Sbjct: 368 KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYG 427

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N L KK  +  A + + +M   G   N VTY S++ G C +G +  +L+    +  +
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHE 487

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PNA+TY  L+    +++ +H AM L+  +   G  P +++Y  L+ G CK+   + A
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 547

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R F  +   G  P+  +YN+L  +LC  GR EEA   L          T VTY  L+  
Sbjct: 548 FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDG 604

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +  G TD A  ++++MV    +    +Y+ ++  LC + K++  +  LDQM     K N
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 378 EGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              Y   ++ +   GK   A ++   + +  +      Y   I+S C+ G+  +A  L+ 
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL-----LG 491
           EM + G TPD  TY+  I G    G I+ A      M +   +P+   +  LL     + 
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784

Query: 492 LCKSRRTDLS-----------LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           L  +   D S            ++ + M++ G  P   TY+ ++ G      LE +  +L
Sbjct: 785 LINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844

Query: 541 KEL 543
             +
Sbjct: 845 DHM 847



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 222/458 (48%), Gaps = 7/458 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
            +V +G  PD V    ++   CK   +  A +   ++  SG+  D  +   L+   C+  
Sbjct: 169 HLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTS 228

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           ++  A  L+  M   G   N  +Y  L++GLC    + ++L  +  ++  G   N  TY+
Sbjct: 229 DLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYT 288

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++   KE  +H A  LLD++  +G  P++ +YN ++ G CK GR ++A+     +   
Sbjct: 289 LLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQN 348

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+  +YN L+  LC  G+ +EA ELL        +PT++T+  LI       + D A
Sbjct: 349 GCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDA 407

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
           L+V   M+    +    +Y  +I  L  + ++    + L++MF     PN  TY  +   
Sbjct: 408 LRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDG 467

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            C VG V  A  + + L   +   P  + Y  +I  L +  K ++A  L+ +M + G TP
Sbjct: 468 YCKVGMVGAALEVFK-LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITP 526

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
              TY++LI+G C +   + A  +F +ME+    PD   +N L   LCKS R +   E +
Sbjct: 527 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE---EAY 583

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             ++ KG +  + TYT LV+G +     + +A +++++
Sbjct: 584 SFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 621



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 211/461 (45%), Gaps = 13/461 (2%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G + D      LL   C+ + ++KA  ++ MM   G   +  SYT L+  LC+   V  A
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREA 268

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + LV  M   G   N  TY  L++GLC  G ++ +   LD +  +G+VP+ +TY+ +++ 
Sbjct: 269 LVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K   +  A+ +   +   G  P+  +YN L+ GLC  G+ +EA        ++GF P 
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPT 387

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V+++  L+   C   R ++A  + + M   +    +  Y +LI  L    +   A + L+
Sbjct: 388 VITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLN 447

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
           EM      P+  +Y  II   C  G V   ++    M H  C PN  TY  L   L    
Sbjct: 448 EMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           K+ +A A+I  +     +     Y  +I   C+K +   AF+L   M + G TPD   Y+
Sbjct: 508 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 567

Query: 452 SLIRGLCMEGLIEEALEIFV----VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            L   LC  G  EEA    V    V+ +  Y   VD F+       K+  TD +  + + 
Sbjct: 568 VLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFS-------KAGNTDFAAVLIEK 620

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           M+ +G   +  TY++L++ +  Q +L  +  +L ++ +  V
Sbjct: 621 MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 218/467 (46%), Gaps = 5/467 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + +A + +  MV  G   ++   T L+  LCK  ++  A  +++ M   G++P   +Y  
Sbjct: 265 VREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++  CK G +  A+ +   ME  G   +  TYNSL+ GLC  G L+++ + L+  I +G
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG 383

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P   T++ L+    K   +  A+++  ++I+   K +L +Y VL+  L K+ R +EA 
Sbjct: 384 FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAK 443

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
               ++ + G  PNVV+Y  ++   C  G    A E+   M+     P   TY  LI  L
Sbjct: 444 ETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               K   A+ ++ +M +    P   +Y  +I   C + + D   +  + M      P+E
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 563

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             YN L   LC  G+ +EA++    L  K     +  Y  ++    + G T  A  L+ +
Sbjct: 564 QAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK 620

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G   D YTYS L++ LC +  + EAL I   M     K ++  +  ++  + K  +
Sbjct: 621 MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            D +  +F  MI  G  P+ TTYT+ +        +E +  ++ E++
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEME 727



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 181/385 (47%), Gaps = 2/385 (0%)

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
           Y  +L   +   G   +TVTYN+++   C  G+L  + ++   L + G+  + +T + LL
Sbjct: 162 YMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALL 221

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
               +   +  A  LL  +   G + N  SY +L+ GLC+     EA+     +   G  
Sbjct: 222 LGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCS 281

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
            N+ +Y +L++ LC EGR  +A  LL EM      P++ TYN +I      G+   AL +
Sbjct: 282 LNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI 341

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
              M +    P   +YN +I  LC  GK+D   + L+    R   P   T+  L    C 
Sbjct: 342 KALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCK 400

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
             ++ +A  +  ++ +       + Y  +I  L +K +  +A + L EM   G  P+  T
Sbjct: 401 AERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVT 460

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y+S+I G C  G++  ALE+F +ME     P+   + +L+ GL + ++   ++ +   M 
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520

Query: 510 EKGQMPNETTYTILVEGIAHQDELE 534
           E G  P   TYT L++G   + E +
Sbjct: 521 EDGITPGVITYTTLIQGQCKKHEFD 545



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 4/318 (1%)

Query: 220 HAAM-KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE-EAIRFFRDLPSKGFEPNVVSYN 277
           HAA+ +LL    A      LV   +  +G  ++ R   +AI+  R +  K    +   YN
Sbjct: 89  HAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYN 148

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
           + LRSL      E   +L + +      P  VTYN +I +    G    A +    + + 
Sbjct: 149 LALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRES 208

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA 396
             +    + N ++   C    +      L  M    C+ NE +Y  L   LC    V+EA
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREA 268

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             ++  + +   S     Y  +I  LC++G+ + A  LL EM   G  P  +TY+++I G
Sbjct: 269 LVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            C  G +++AL I  +ME+    PD   +N+L+ GLC   + D + E+    I +G  P 
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGG-KLDEAEELLNGAIARGFTPT 387

Query: 517 ETTYTILVEGIAHQDELE 534
             T+T L+ G    + ++
Sbjct: 388 VITFTNLINGYCKAERID 405


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 235/480 (48%), Gaps = 35/480 (7%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA    ++M+     P++     +L+ LCK   + +A  ++  ++  G+  +  +Y   
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LC+ G +  A++LV+ M  Y  P + VTYN+L+RGLC      +++ +L R++ +G 
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P+ FTY+ +++   K   V  A +LL D + KG  P+ V+Y  L+ GLC EG  E A+ 
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F +  +KG +P++V YN L++ LC++G    A +++ EM      P I TYNI+I  L 
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 407

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G    A  V+++ +   + P   ++N +I   C   K+D  ++ +++M+     P+  
Sbjct: 408 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 467

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           TYN                                   V+  LC+ GK  +  +   EM 
Sbjct: 468 TYNS----------------------------------VLNGLCKAGKVNEVNETFQEMI 493

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  P+  TY+ LI   C    +EEA ++ V M +    PD  +FN L+ G C++   +
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            +  +FQ + EKG      T+  L+   + +  + ++ ++  E+  +   ++S   R+++
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 613



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 226/470 (48%), Gaps = 6/470 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L DA    ERM      P       ++  L  A    +A KV   M+++G+ PD  
Sbjct: 63  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 122

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T  +   C       A++L+  +   G     V Y ++V GL   G+ + + Q  D++
Sbjct: 123 THTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQM 178

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   + PN   ++ +L A  K   V  A  LL  +I +G   NL +YN+ + GLC+ GR 
Sbjct: 179 LHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL 238

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA+R    + +    P+VV+YN L+R LC +   +EA   L  M      P   TYN +
Sbjct: 239 PEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 297

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           A ++L + V   F P   +Y  +I  LC+EG V+  ++  ++   +  
Sbjct: 298 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 357

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+   YN L   LC  G +  A  ++  +  +      + Y  VI  LC+ G    A  
Sbjct: 358 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 417

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           ++ +    G+ PD +T+++LI G C    ++ AL++   M EY   PD   +N++L GLC
Sbjct: 418 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLC 477

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K+ + +   E FQ MI KG  PN  TY IL+E     +++E +++V+ ++
Sbjct: 478 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 527



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 218/446 (48%), Gaps = 35/446 (7%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A L L +++ +G   ++      +  LC+A ++ +A+++++ M +  + PD  +Y  L+
Sbjct: 205 EAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLI 263

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCKK     AM  + +M + G   +  TYN+++ G C +  + ++ + L   + KG V
Sbjct: 264 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 323

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY  L+     E  V  A++L ++  AKG KP++V YN L+ GLC +G    A++ 
Sbjct: 324 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 383

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++  +G  P++ +YNI++  LC  G   +A  ++ +       P + T+N LI     
Sbjct: 384 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 443

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K D AL++++ M +    P   +YN ++  LC  GKV+ V +   +M  + C PN  T
Sbjct: 444 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 503

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           YN L                                  I + CR  K  +A +++ +M++
Sbjct: 504 YNIL----------------------------------IENFCRSNKMEEASKVIVKMSQ 529

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD+ ++++LI G C  G +E A  +F  +EE  Y    D FN L+          +
Sbjct: 530 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 589

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEG 526
           + ++F  M+ KG   +  TY +L++G
Sbjct: 590 AEKIFDEMLSKGHRADSYTYRVLIDG 615



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 218/457 (47%), Gaps = 40/457 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A   L RM+++G  PD      ++   CK + +++A ++++  V  G +PD  +Y  L+
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N LC +G+V  A++L  + +  G   + V YNSLV+GLC+ G +  +LQ ++ + ++G  
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ ++    K   +  A  +++D I KG  P++ ++N L+ G CK  + + A++ 
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G  P+ ++YN +L  LC  G+  E NE   EM      P  +TYNILI +   
Sbjct: 454 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 513

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K + A KV+ +M +    P A S+N +I   C  G +                  EG 
Sbjct: 514 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL------------------EG- 554

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
                          A+ + Q L  K  S+  + +  +I +   K   + A ++  EM  
Sbjct: 555 ---------------AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 599

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G   DSYTY  LI G C    ++ A    V M +  + P +  F  ++  L  + R   
Sbjct: 600 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 659

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           ++ +  +M++ G +P       +V+ I + D+ E++A
Sbjct: 660 AVGIIHIMVKIGVVPE------VVDTILNADKKEIAA 690



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 198/409 (48%), Gaps = 6/409 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y   +    + G +  A+   E+M+ +  P     YN+++  L      +Q+ +   R++
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
             G+ P+  T++  L +       H A++LL  +  +G     V+Y  ++ GL   G T 
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 169

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A + F  +      PN+ ++N +L +LC  G   EA  LL ++     S  + TYNI I
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G+   A++++D M +    P   +YN +I  LC +      +  L +M ++ C 
Sbjct: 230 RGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P++ TYN +    C +  VQEA  +++    K     Q  Y  +I  LC +G   +A +L
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             E    G  PD   Y+SL++GLC++GLI  AL++   M E    PD+  +N ++ GLCK
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                 +  V    I KG +P+  T+  L++G   + +L+ + ++++ +
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 457



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 193/441 (43%), Gaps = 12/441 (2%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +A +++ A+   E M      P A +Y  +++ L        A ++  +M   G   +  
Sbjct: 63  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 122

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T+   +R  C+    + +L+ L  L  +G    A  Y  ++   Y     H A +L D +
Sbjct: 123 THTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQM 178

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +     PNL ++N +L  LCK G   EA      +  +G   N+ +YNI +R LC  GR 
Sbjct: 179 LHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL 238

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            EA  L+  M      P +VTYN LI  L        A+  L  M+     P   +YN I
Sbjct: 239 PEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 297

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I   C    V    + L     +   P++ TY  L   LC  G V+ A  +      K  
Sbjct: 298 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 357

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  ++  LC +G    A Q++ EM + G  PD  TY+ +I GLC  G I +A  
Sbjct: 358 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT- 416

Query: 469 IFVVMEEY---DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
             VVM +     Y PDV  FN L+ G CK  + D +L++ + M E G  P+  TY  ++ 
Sbjct: 417 --VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 474

Query: 526 GIAHQDELELSAEVLKELQLR 546
           G+    ++    E  +E+ L+
Sbjct: 475 GLCKAGKVNEVNETFQEMILK 495



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 110/211 (52%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A   +ERM   G  PD +   ++L  LCKA K+ +  +  + M+  G  P+  +Y 
Sbjct: 446 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYN 505

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+   +  A +++ KM   G   + V++N+L+ G C  G+L  +     +L +K
Sbjct: 506 ILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G    A T++ L+ A   +  +H A K+ D++++KG + +  +Y VL+ G CK    + A
Sbjct: 566 GYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 625

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
                ++  KGF P++ ++  ++ SL +  R
Sbjct: 626 YMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 656



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 150/360 (41%), Gaps = 58/360 (16%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA + +   + KG+ PDV     L+   CK  K+  A++++E M   GI PD  +Y  
Sbjct: 412 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 471

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LCK G V    +  ++M   G   N +TYN L+   C    + ++ + + ++ Q+G
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+A                                   VS+N L+ G C+ G  E A 
Sbjct: 532 LHPDA-----------------------------------VSFNTLIYGFCRNGDLEGAY 556

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+ L  KG+     ++N L+ +   +     A ++  EM          TY +LI   
Sbjct: 557 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 616

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
                 D A   L EM+K  F PS +++  +I  L    +V   V  +            
Sbjct: 617 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH----------- 665

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK-TYQAFQLLYE 437
                  ++  +G V E    I +   K+ ++P    K ++  L +KG  +Y  +++L+E
Sbjct: 666 -------IMVKIGVVPEVVDTILNADKKEIAAP----KILVEDLMKKGHISYPTYEVLHE 714



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 102/197 (51%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+N+     + M+ KG  P+ +    L+ + C++NKM++A KV+  M   G+ PDA S+ 
Sbjct: 481 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 540

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+ G++  A  L +K+E+ GY     T+N+L+       N++ + +  D ++ K
Sbjct: 541 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 600

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +++TY  L++ + K   V  A   L ++I KG  P++ ++  ++  L    R  +A
Sbjct: 601 GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 660

Query: 258 IRFFRDLPSKGFEPNVV 274
           +     +   G  P VV
Sbjct: 661 VGIIHIMVKIGVVPEVV 677


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 235/474 (49%), Gaps = 9/474 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + + A   L  M  +G  PDV     L+  L K   M  A+K+ + M   G+ PD +
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
            Y  L++   KKG++  A ++ E++      YP N  +YN ++ GLC  G  ++S +   
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYP-NIPSYNVMINGLCKCGKFDESFEIWH 279

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R+ +     + +TYS L+        +  A ++  ++   G  P++V YN +L G  + G
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R EE +  ++ +  +G    VVSYNIL+R L    + +EA  +   +   D     +TY 
Sbjct: 340 RIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYG 398

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +L+  L  +G  + AL +L+E   GR      +Y+ +I  LC EG++D V   LDQM   
Sbjct: 399 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 458

Query: 373 RCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            CKPN    N  A++ G     K+++A     ++ +K        Y  +I  L +  +  
Sbjct: 459 GCKPNPHVCN--AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 516

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A+ L+ EM   G+ P+  TYS L+ GLC    ++ AL ++    E  +KPDV   N ++
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 576

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            GLC S + + +L+++  M ++  +PN  T+  L+EG     + E ++++   +
Sbjct: 577 HGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 226/459 (49%), Gaps = 7/459 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F ++  +   G +P +    +LL  L ++NK  +A        + G+ P+  +Y  L+
Sbjct: 99  DIFQRMHEIF--GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILI 156

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
              C+K     A +L+  M + G+  +  +Y +L+  L   G ++ +L+  D + ++G+ 
Sbjct: 157 KISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT 216

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK--PNLVSYNVLLTGLCKEGRTEEAI 258
           P+   Y+ L++  +K+  +  A ++ + ++ KG    PN+ SYNV++ GLCK G+ +E+ 
Sbjct: 217 PDVACYNILIDGFFKKGDILNASEIWERLL-KGPSVYPNIPSYNVMINGLCKCGKFDESF 275

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             +  +       ++ +Y+ L+  LC  G  + A  +  EM     SP +V YN ++   
Sbjct: 276 EIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGY 335

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+ +  L++   M K   R +  SYN +I  L    KVD  +   + +  + C  + 
Sbjct: 336 LRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 394

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY  L   LC  G + +A +I++   N +       Y  +I  LCR+G+  +   +L +
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           MTK+G  P+ +  +++I G      +E+AL  F  M      P V  +N L+ GL K+ R
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
              +  + + M+ KG  PN  TY++L+ G+    +L+++
Sbjct: 515 FSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 3/418 (0%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G  P   SY  L+N L +      A       E  G   N  TYN L++  C     +++
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
            + L+ + ++G  P+ F+Y  L+ +  K   +  A+KL D++  +G  P++  YN+L+ G
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228

Query: 248 LCKEGRTEEAIRFF-RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
             K+G    A   + R L      PN+ SYN+++  LC  G+++E+ E+   M   +R  
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            + TY+ LI  L   G  D A +V  EM +    P    YN ++      G+++  ++  
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             M    C+    +YN L   L    KV EA +I + L  K   +    Y  ++  LC+ 
Sbjct: 349 KVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A  +L E        D++ YSS+I GLC EG ++E   +   M ++  KP+    
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           NA++ G  ++ + + +L  F  M+ KG  P   TY  L+ G++  +    +  ++KE+
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 193/424 (45%), Gaps = 41/424 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K +++F    RM       D+   + L++ LC +  +  A +V + M  +G+ PD   Y 
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 329

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N   + G +   ++L + ME  G  T  V+YN L+RGL     +++++   + L +K
Sbjct: 330 TMLNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEK 388

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE- 256
               ++ TY  L+    K   ++ A+ +L++     G  +  +Y+ ++ GLC+EGR +E 
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448

Query: 257 ----------------------------------AIRFFRDLPSKGFEPNVVSYNILLRS 282
                                             A+RFF ++ SKG  P VV+YN L+  
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           L    R+ EA  L+ EM      P ++TY++L+  L    K D AL +  + ++  F+P 
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
              +N II  LCS GKV+  ++   +M  R+C PN  T+N L  + G  KV++     + 
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL--MEGFYKVRDFERASKI 626

Query: 403 LGNKQNSSPQE---FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
             +     PQ     Y   +  LC   +   A   L +    G  P + T++ L+R +  
Sbjct: 627 WDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLD 686

Query: 460 EGLI 463
            G +
Sbjct: 687 NGAL 690



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 165/316 (52%), Gaps = 7/316 (2%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G +P + SYN LL  L +  + +EA  FF    + G  PN+ +YNIL++  C + ++++A
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            ELL  M     SP + +Y  LI SLA +G    ALK+ DEM +    P  A YN +I  
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228

Query: 353 LCSEGKVDLVVKCLDQMFH-RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
              +G +    +  +++       PN  +YN +   LC  GK  E+F I   +  K+N  
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM--KKNER 286

Query: 411 PQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
            Q+ Y Y  +I  LC  G    A ++  EM + G +PD   Y++++ G    G IEE LE
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           ++ VME+   +  V ++N L+ GL ++ + D ++ +++++ EK    +  TY +LV G+ 
Sbjct: 347 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 529 HQDELELSAEVLKELQ 544
               L  +  +L+E +
Sbjct: 406 KNGYLNKALSILEEAE 421



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 114/213 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL DA      MVSKG  P VV    L+  L KA +  +A  +++ M+  G  P+  
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+N LC+   +  A+ L  +  + G+  +   +N ++ GLC  G +  +LQ    +
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q+  VPN  T++ L+E  YK R    A K+ D I+  G +P+++SYN+ L GLC   R 
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRI 655

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            +A+ F  D   +G  P  +++NIL+R++   G
Sbjct: 656 SDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 4/250 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L++    L++M   G KP+      ++    +A+K++ A++    MVS G  P   
Sbjct: 441 REGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 500

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N L K      A  LV++M   G+  N +TY+ L+ GLC    L+ +L    + 
Sbjct: 501 TYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 560

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG  P+   ++ ++        V  A++L  ++  +   PNLV++N L+ G  K    
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDF 620

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS--PTIVTYN 312
           E A + +  +   G +P+++SYNI L+ LC   R  +A   L   D  DR   PT +T+N
Sbjct: 621 ERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLN--DAVDRGVLPTAITWN 678

Query: 313 ILIGSLAYHG 322
           IL+ ++  +G
Sbjct: 679 ILVRAVLDNG 688



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 76/167 (45%), Gaps = 1/167 (0%)

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK-YGFTPDSYTYSSLIRGL 457
           I++ +  ++   P++    VI +  +     QA  +   M + +G  P   +Y+SL+  L
Sbjct: 65  IVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 124

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
                 +EA   F+  E     P++  +N L+   C+ ++ D + E+   M E+G  P+ 
Sbjct: 125 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
            +Y  L+  +A    +  + ++  E+  R V  + A   +++   F+
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 231


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 207/395 (52%), Gaps = 13/395 (3%)

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G +  A + +  ME  G+  N V+YN+++ G    GN+  + + LD +  KG+ P+++T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+    KE  +  A  L D ++  G  PN V+YN L+ G C +G  E A  +  ++ 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+V +YN+L+ +L MEGR  EA++++ EM      P  +TYNILI   +  G   
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQMFHRRCKPNEGTY 381
            A  + +EM+     P+  +Y  +I  L    ++    DL  K LDQ       P+   +
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ----GVSPDVIMF 421

Query: 382 NGLAML---CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           N  AM+   C  G V+ AF +++ +  K     +  +  ++   CR+GK  +A  LL EM
Sbjct: 422 N--AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 479

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  PD  +Y++LI G    G I++A  +   M    + P +  +NAL+  LCK++  
Sbjct: 480 KXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 539

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           DL+ E+ + M+ KG  P+++TY  L+EG+ + D L
Sbjct: 540 DLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 574



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 200/375 (53%), Gaps = 2/375 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G KP+VV    +++       ++ A ++++ M   GI PD+ +Y  L++ +CK+G +  A
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             L +KM + G   N VTYN+L+ G C  G+L ++  + D +++KG++P+  TY+ L+ A
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 322

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
            + E  +  A  ++ ++  KG  P+ ++YN+L+ G  + G  + A     ++ SKG EP 
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            V+Y  L+  L    R +EA++L  ++     SP ++ +N +I     +G  + A  +L 
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK 442

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VG 391
           EM +    P   ++N ++   C EGKV+     LD+M  R  KP+  +YN L    G  G
Sbjct: 443 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRG 502

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            +++AF +   + +   +     Y  +I  LC+  +   A +LL EM   G +PD  TY 
Sbjct: 503 DIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYL 562

Query: 452 SLIRGLC-MEGLIEE 465
           SLI G+  ++ L+E+
Sbjct: 563 SLIEGMGNVDTLVED 577



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 2/320 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L +A    ++MV  G  P+ V    L+   C    +++A    + MV  GI+P  S
Sbjct: 255 KEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 314

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  LV+ L  +G +G A  ++++M   G   + +TYN L+ G    GN  ++    + +
Sbjct: 315 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG+ P   TY+ L+    +   +  A  L + I+ +G  P+++ +N ++ G C  G  
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV 434

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A    +++  K   P+ V++N L++  C EG+ EEA  LL EM      P  ++YN L
Sbjct: 435 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTL 494

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G    A  V DEM+   F P+  +YN +I  LC   + DL  + L +M ++  
Sbjct: 495 ISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 554

Query: 375 KPNEGTYNGLAMLCGVGKVQ 394
            P++ TY  L+++ G+G V 
Sbjct: 555 SPDDSTY--LSLIEGMGNVD 572



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 141/316 (44%), Gaps = 34/316 (10%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KPN+VSYN ++ G    G  E A R    +  KG EP+  +Y  L+  +C EGR EEA
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
           + L  +M      P  VTYN LI      G  + A    DEMVK    PS ++YN ++  
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 322

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           L  EG++      + +M  +   P+  TYN L                            
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNIL---------------------------- 354

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                 I    R G   +AF L  EM   G  P   TY+SLI  L     ++EA ++F  
Sbjct: 355 ------INGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 408

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           + +    PDV  FNA++ G C +   + +  + + M  K   P+E T+  L++G   + +
Sbjct: 409 ILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 468

Query: 533 LELSAEVLKELQLRQV 548
           +E +  +L E++ R +
Sbjct: 469 VEEARMLLDEMKXRGI 484



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 135/278 (48%), Gaps = 3/278 (1%)

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM-VKGRFRPSA 343
           +EG+ ++A E +  M+G    P +V+YN +I   +  G  + A ++LD M VKG   P +
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG-IEPDS 243

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +Y  +I+ +C EG+++      D+M      PN  TYN L    C  G ++ AF+    
Sbjct: 244 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 303

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  K        Y  ++ +L  +G+  +A  ++ EM K G  PD+ TY+ LI G    G 
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            + A ++   M     +P    + +L+  L +  R   + ++F+ ++++G  P+   +  
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +++G      +E +  +LKE+  + V  +      +MQ
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 461



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 70/139 (50%)

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +GK  +A + +  M   GF P+  +Y+++I G    G IE A  I   M     +PD   
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + +L+ G+CK  R + +  +F  M+E G +PN  TY  L++G  ++ +LE +     E+ 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 545 LRQVVSESAVERLVMQYDF 563
            + ++   +   L++   F
Sbjct: 306 KKGIMPSVSTYNLLVHALF 324



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 3/113 (2%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R R+ K+ +A + L+ M  +G KPD +    L+    +   +K A  V + M+S G  P 
Sbjct: 463 RCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPT 522

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
             +Y  L+ CLCK      A +L+++M + G   +  TY SL+ G   +GN++
Sbjct: 523 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG---MGNVD 572


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 211/421 (50%), Gaps = 1/421 (0%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +K A  V E MV   I     ++  ++N LC++G    A   +  ME YG   N VTYN+
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           ++ G C+ G    + +    +  K L P+ +TY+  +    KER +  A  +L  ++  G
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             PN V+YN L+ G C +G  ++A  +  ++ ++G   +V +YN+L+ +L +E R EEA 
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +++ EM      P +VTYNI I      G    AL + DEMV+   RP+  +Y  +I   
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
               ++    +   +       P+   +N L    C  G +  AF +++ + N +    +
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             +  ++   CR+ K  +A +LL EM + G  PD  +Y++LI G    G +++ALE+F  
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M    + P +  +NAL+ G  K    D + E+ + M  KG  P+++TY  ++E +   D+
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDD 617

Query: 533 L 533
           L
Sbjct: 618 L 618



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 182/366 (49%), Gaps = 1/366 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G KP+VV    ++   C   K + A K+ + M    + PD  +Y   ++ LCK+  +  A
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA 306

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             ++ K+ + G   N VTYN+L+ G C  G+L+++  + D ++ +G+V + FTY+ L+ A
Sbjct: 307 SGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA 366

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
            + E+ +  A  ++ ++  KG +P++V+YN+ + G C+ G  ++A+  F ++  K   P 
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT 426

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V +Y  L+       R  EA E   +       P I+ +N LI     +G  D A ++L 
Sbjct: 427 VETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLK 486

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVG 391
           EM   +  P   ++N ++   C E KV+   K LD+M  R  KP+  +YN L +     G
Sbjct: 487 EMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRG 546

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            +++A  +   + +         Y  +I    + G+   A +LL EM   G TPD  TY 
Sbjct: 547 DMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYL 606

Query: 452 SLIRGL 457
            +I  +
Sbjct: 607 YVIEAM 612



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 222/469 (47%), Gaps = 14/469 (2%)

Query: 102 TNLLYDL-----CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           T L++DL     C+  K  +A++ + +M  + IIP   +   L++ L K   +  A  + 
Sbjct: 146 TTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVY 205

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
           E+M      ++ VT+N ++  LC  G   ++  F+  +   G+ PN  TY+ ++      
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
               AA K+   +  K  KP+  +YN  ++ LCKE R EEA      L   G  PN V+Y
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N L+   C +G  ++A     EM       ++ TYN+LI +L    + + A  ++ EM +
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG----VGK 392
               P   +YN  I   C  G     +   D+M  +  +P   TY  L  + G    + +
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445

Query: 393 VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            +E F   +S+  K+   P    +  +I   C  G   +AFQLL EM      PD  T++
Sbjct: 446 AEEKFK--KSI--KEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFN 501

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +L++G C E  +EEA ++   M+E   KPD  ++N L+ G  K      +LEVF  M+  
Sbjct: 502 TLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSL 561

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           G  P   TY  L++G +   E + + E+L+E+Q + +  + +    V++
Sbjct: 562 GFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIE 610



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 152/307 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ +A   L +++  G  P+ V    L+   C    + KA    + M++ GI+    
Sbjct: 299 KERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVF 358

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L  +  +  A  ++++M + G   + VTYN  + G C  GN  ++L   D +
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++K + P   TY+ L++   K   +  A +     I +G  P+++ +N L+ G C  G  
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A +  +++ +    P+ V++N L++  C E + EEA +LL EM      P  ++YN L
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTL 538

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I   +  G    AL+V DEM+   F P+  +YN +I      G+ D   + L +M  +  
Sbjct: 539 ISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGI 598

Query: 375 KPNEGTY 381
            P++ TY
Sbjct: 599 TPDDSTY 605



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 133/243 (54%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + ++ +A   ++ M  KG +PDVV     +   C+    KKA+ + + MV   I P   +
Sbjct: 370 EKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVET 429

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L++   K+  +  A +  +K    G   + + +N+L+ G C+ GN++++ Q L  + 
Sbjct: 430 YTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMD 489

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              +VP+  T++ L++   +ER V  A KLLD++  +G KP+ +SYN L++G  K G  +
Sbjct: 490 NAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMK 549

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+  F ++ S GF+P +++YN L++     G  + A ELL EM     +P   TY  +I
Sbjct: 550 DALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVI 609

Query: 316 GSL 318
            ++
Sbjct: 610 EAM 612



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 93/171 (54%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + +++++A  + ++ + +G  PD++    L+   C    + +A ++++ M ++ ++
Sbjct: 435 DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVV 494

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  L+   C++  V  A +L+++M++ G   + ++YN+L+ G    G++  +L+ 
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
            D ++  G  P   TY+ L++   K      A +LL ++ +KG  P+  +Y
Sbjct: 555 FDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 232/472 (49%), Gaps = 5/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + + A   L  M  +G  PDV     L+  L K   M  A+K+ + M   G+ PD +
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
            Y  L++   KKG++  A ++ E++      YP N  +YN ++ GLC  G  ++S +   
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYP-NIPSYNVMINGLCKCGKFDESFEIWH 279

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R+ +     + +TYS L+        +  A ++  ++   G  P++V YN +L G  + G
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R EE +  ++ +  +G    VVSYNIL+R L    + +EA  +   +   D     +TY 
Sbjct: 340 RIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYG 398

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +L+  L  +G  + AL +L+E   GR      +Y+ +I  LC EG++D V   LDQM   
Sbjct: 399 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 458

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            CKPN    N  +       K+++A     ++ +K        Y  +I  L +  +  +A
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           + L+ EM   G+ P+  TYS L+ GLC    ++ AL ++    E  +KPDV   N ++ G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           LC S + + +L+++  M ++  +PN  T+  L+EG     + E ++++   +
Sbjct: 579 LCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 226/459 (49%), Gaps = 7/459 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F ++  +   G +P +    +LL  L ++NK  +A        + G+ P+  +Y  L+
Sbjct: 99  DIFQRMHEIF--GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILI 156

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
              C+K     A +L+  M + G+  +  +Y +L+  L   G ++ +L+  D + ++G+ 
Sbjct: 157 KISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT 216

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK--PNLVSYNVLLTGLCKEGRTEEAI 258
           P+   Y+ L++  +K+  +  A ++ + ++ KG    PN+ SYNV++ GLCK G+ +E+ 
Sbjct: 217 PDVACYNILIDGFFKKGDILNASEIWERLL-KGPSVYPNIPSYNVMINGLCKCGKFDESF 275

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             +  +       ++ +Y+ L+  LC  G  + A  +  EM     SP +V YN ++   
Sbjct: 276 EIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGY 335

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+ +  L++   M K   R +  SYN +I  L    KVD  +   + +  + C  + 
Sbjct: 336 LRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 394

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY  L   LC  G + +A +I++   N +       Y  +I  LCR+G+  +   +L +
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           MTK+G  P+ +  +++I G      +E+AL  F  M      P V  +N L+ GL K+ R
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
              +  + + M+ KG  PN  TY++L+ G+    +L+++
Sbjct: 515 FSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 3/418 (0%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G  P   SY  L+N L +      A       E  G   N  TYN L++  C     +++
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
            + L+ + ++G  P+ F+Y  L+ +  K   +  A+KL D++  +G  P++  YN+L+ G
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228

Query: 248 LCKEGRTEEAIRFF-RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
             K+G    A   + R L      PN+ SYN+++  LC  G+++E+ E+   M   +R  
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            + TY+ LI  L   G  D A +V  EM +    P    YN ++      G+++  ++  
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             M    C+    +YN L   L    KV EA +I + L  K   +    Y  ++  LC+ 
Sbjct: 349 KVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A  +L E        D++ YSS+I GLC EG ++E   +   M ++  KP+    
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           NA++ G  ++ + + +L  F  M+ KG  P   TY  L+ G++  +    +  ++KE+
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 165/316 (52%), Gaps = 7/316 (2%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G +P + SYN LL  L +  + +EA  FF    + G  PN+ +YNIL++  C + ++++A
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            ELL  M     SP + +Y  LI SLA +G    ALK+ DEM +    P  A YN +I  
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228

Query: 353 LCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
              +G +    +  +++       PN  +YN +   LC  GK  E+F I   +  K+N  
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM--KKNER 286

Query: 411 PQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
            Q+ Y Y  +I  LC  G    A ++  EM + G +PD   Y++++ G    G IEE LE
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           ++ VME+   +  V ++N L+ GL ++ + D ++ +++++ EK    +  TY +LV G+ 
Sbjct: 347 LWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 529 HQDELELSAEVLKELQ 544
               L  +  +L+E +
Sbjct: 406 KNGYLNKALSILEEAE 421



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 134/259 (51%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A    E +  K    D +    L++ LCK   + KA+ ++E   +     D  +Y+
Sbjct: 374 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 433

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N LC++G +     ++++M  +G   N    N+++ G      L  +L+F   ++ K
Sbjct: 434 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK 493

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   TY+ L+    K      A  L+ +++ KG KPN+++Y++L+ GLC+  + + A
Sbjct: 494 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  +     KGF+P+V  +NI++  LC  G+ E+A +L +EM      P +VT+N L+  
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613

Query: 318 LAYHGKTDHALKVLDEMVK 336
                  + A K+ D +++
Sbjct: 614 FYKVRDFERASKIWDHILQ 632



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 81/163 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL DA      MVSKG  P VV    L+  L KA +  +A  +++ M+  G  P+  
Sbjct: 476 RASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+N LC+   +  A+ L  +  + G+  +   +N ++ GLC  G +  +LQ    +
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
            Q+  VPN  T++ L+E  YK R    A K+ D I+      N
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 67/130 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  + ++A+  ++ M+ KG KP+++  + L+  LC+  K+  A+ +    +  G  PD  
Sbjct: 511 KAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVK 570

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +  +++ LC  G V  A+QL  +M+      N VT+N+L+ G   + +  ++ +  D +
Sbjct: 571 MHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630

Query: 195 IQKGLVPNAF 204
           +Q     N +
Sbjct: 631 LQSWSSSNCY 640



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 76/167 (45%), Gaps = 1/167 (0%)

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK-YGFTPDSYTYSSLIRGL 457
           I++ +  ++   P++    VI +  +     QA  +   M + +G  P   +Y+SL+  L
Sbjct: 65  IVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 124

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
                 +EA   F+  E     P++  +N L+   C+ ++ D + E+   M E+G  P+ 
Sbjct: 125 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
            +Y  L+  +A    +  + ++  E+  R V  + A   +++   F+
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 231


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 235/480 (48%), Gaps = 35/480 (7%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA    ++M+     P++     +L+ LCK   + +A  ++  ++  G+  +  +Y   
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LC+ G +  A++LV+ M  Y  P + VTYN+L+RGLC      +++ +L R++ +G 
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P+ FTY+ +++   K   V  A +LL D + KG  P+ V+Y  L+ GLC EG  E A+ 
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F +  +KG +P++V YN L++ LC++G    A +++ EM      P I TYNI+I  L 
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 406

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G    A  V+++ +   + P   ++N +I   C   K+D  ++ +++M+     P+  
Sbjct: 407 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 466

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           TYN                                   V+  LC+ GK  +  +   EM 
Sbjct: 467 TYNS----------------------------------VLNGLCKAGKVNEVNETFQEMI 492

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  P+  TY+ LI   C    +EEA ++ V M +    PD  +FN L+ G C++   +
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            +  +FQ + EKG      T+  L+   + +  + ++ ++  E+  +   ++S   R+++
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 612



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 226/470 (48%), Gaps = 6/470 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L DA    ERM      P       ++  L  A    +A KV   M+++G+ PD  
Sbjct: 62  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 121

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T  +   C       A++L+  +   G     V Y ++V GL   G+ + + Q  D++
Sbjct: 122 THTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQM 177

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   + PN   ++ +L A  K   V  A  LL  +I +G   NL +YN+ + GLC+ GR 
Sbjct: 178 LHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL 237

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA+R    + +    P+VV+YN L+R LC +   +EA   L  M      P   TYN +
Sbjct: 238 PEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 296

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           A ++L + V   F P   +Y  +I  LC+EG V+  ++  ++   +  
Sbjct: 297 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 356

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+   YN L   LC  G +  A  ++  +  +      + Y  VI  LC+ G    A  
Sbjct: 357 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 416

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           ++ +    G+ PD +T+++LI G C    ++ AL++   M EY   PD   +N++L GLC
Sbjct: 417 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLC 476

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K+ + +   E FQ MI KG  PN  TY IL+E     +++E +++V+ ++
Sbjct: 477 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 526



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 218/446 (48%), Gaps = 35/446 (7%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A L L +++ +G   ++      +  LC+A ++ +A+++++ M +  + PD  +Y  L+
Sbjct: 204 EAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLI 262

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCKK     AM  + +M + G   +  TYN+++ G C +  + ++ + L   + KG V
Sbjct: 263 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 322

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY  L+     E  V  A++L ++  AKG KP++V YN L+ GLC +G    A++ 
Sbjct: 323 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 382

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++  +G  P++ +YNI++  LC  G   +A  ++ +       P + T+N LI     
Sbjct: 383 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 442

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K D AL++++ M +    P   +YN ++  LC  GKV+ V +   +M  + C PN  T
Sbjct: 443 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 502

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           YN L                                  I + CR  K  +A +++ +M++
Sbjct: 503 YNIL----------------------------------IENFCRSNKMEEASKVIVKMSQ 528

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD+ ++++LI G C  G +E A  +F  +EE  Y    D FN L+          +
Sbjct: 529 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 588

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEG 526
           + ++F  M+ KG   +  TY +L++G
Sbjct: 589 AEKIFDEMLSKGHRADSYTYRVLIDG 614



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 218/457 (47%), Gaps = 40/457 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A   L RM+++G  PD      ++   CK + +++A ++++  V  G +PD  +Y  L+
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N LC +G+V  A++L  + +  G   + V YNSLV+GLC+ G +  +LQ ++ + ++G  
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ ++    K   +  A  +++D I KG  P++ ++N L+ G CK  + + A++ 
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G  P+ ++YN +L  LC  G+  E NE   EM      P  +TYNILI +   
Sbjct: 453 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 512

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K + A KV+ +M +    P A S+N +I   C  G +                  EG 
Sbjct: 513 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL------------------EG- 553

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
                          A+ + Q L  K  S+  + +  +I +   K   + A ++  EM  
Sbjct: 554 ---------------AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 598

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G   DSYTY  LI G C    ++ A    V M +  + P +  F  ++  L  + R   
Sbjct: 599 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 658

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           ++ +  +M++ G +P       +V+ I + D+ E++A
Sbjct: 659 AVGIIHIMVKIGVVPE------VVDTILNADKKEIAA 689



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 198/409 (48%), Gaps = 6/409 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y   +    + G +  A+   E+M+ +  P     YN+++  L      +Q+ +   R++
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
             G+ P+  T++  L +       H A++LL  +  +G     V+Y  ++ GL   G T 
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 168

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A + F  +      PN+ ++N +L +LC  G   EA  LL ++     S  + TYNI I
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G+   A++++D M +    P   +YN +I  LC +      +  L +M ++ C 
Sbjct: 229 RGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P++ TYN +    C +  VQEA  +++    K     Q  Y  +I  LC +G   +A +L
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             E    G  PD   Y+SL++GLC++GLI  AL++   M E    PD+  +N ++ GLCK
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                 +  V    I KG +P+  T+  L++G   + +L+ + ++++ +
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 456



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 193/441 (43%), Gaps = 12/441 (2%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +A +++ A+   E M      P A +Y  +++ L        A ++  +M   G   +  
Sbjct: 62  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 121

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T+   +R  C+    + +L+ L  L  +G    A  Y  ++   Y     H A +L D +
Sbjct: 122 THTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQM 177

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +     PNL ++N +L  LCK G   EA      +  +G   N+ +YNI +R LC  GR 
Sbjct: 178 LHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL 237

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            EA  L+  M      P +VTYN LI  L        A+  L  M+     P   +YN I
Sbjct: 238 PEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 296

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I   C    V    + L     +   P++ TY  L   LC  G V+ A  +      K  
Sbjct: 297 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 356

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  ++  LC +G    A Q++ EM + G  PD  TY+ +I GLC  G I +A  
Sbjct: 357 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT- 415

Query: 469 IFVVMEEY---DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
             VVM +     Y PDV  FN L+ G CK  + D +L++ + M E G  P+  TY  ++ 
Sbjct: 416 --VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 473

Query: 526 GIAHQDELELSAEVLKELQLR 546
           G+    ++    E  +E+ L+
Sbjct: 474 GLCKAGKVNEVNETFQEMILK 494



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 110/211 (52%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A   +ERM   G  PD +   ++L  LCKA K+ +  +  + M+  G  P+  +Y 
Sbjct: 445 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYN 504

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+   +  A +++ KM   G   + V++N+L+ G C  G+L  +     +L +K
Sbjct: 505 ILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G    A T++ L+ A   +  +H A K+ D++++KG + +  +Y VL+ G CK    + A
Sbjct: 565 GYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 624

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
                ++  KGF P++ ++  ++ SL +  R
Sbjct: 625 YMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 655



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 150/360 (41%), Gaps = 58/360 (16%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA + +   + KG+ PDV     L+   CK  K+  A++++E M   GI PD  +Y  
Sbjct: 411 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 470

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LCK G V    +  ++M   G   N +TYN L+   C    + ++ + + ++ Q+G
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+A                                   VS+N L+ G C+ G  E A 
Sbjct: 531 LHPDA-----------------------------------VSFNTLIYGFCRNGDLEGAY 555

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+ L  KG+     ++N L+ +   +     A ++  EM          TY +LI   
Sbjct: 556 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 615

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
                 D A   L EM+K  F PS +++  +I  L    +V   V  +            
Sbjct: 616 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIH----------- 664

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK-TYQAFQLLYE 437
                  ++  +G V E    I +   K+ ++P    K ++  L +KG  +Y  +++L+E
Sbjct: 665 -------IMVKIGVVPEVVDTILNADKKEIAAP----KILVEDLMKKGHISYPTYEVLHE 713



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 102/197 (51%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+N+     + M+ KG  P+ +    L+ + C++NKM++A KV+  M   G+ PDA S+ 
Sbjct: 480 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 539

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+ G++  A  L +K+E+ GY     T+N+L+       N++ + +  D ++ K
Sbjct: 540 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 599

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +++TY  L++ + K   V  A   L ++I KG  P++ ++  ++  L    R  +A
Sbjct: 600 GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 659

Query: 258 IRFFRDLPSKGFEPNVV 274
           +     +   G  P VV
Sbjct: 660 VGIIHIMVKIGVVPEVV 676


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 231/460 (50%), Gaps = 18/460 (3%)

Query: 86  LERMVSKGHKPD---VVQATN-LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +E  +S  HK      +QA N LLY L K  + +   ++ E M+S+G+ P   ++  L++
Sbjct: 131 VEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLID 190

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C++G++  A ++ ++M   G     + Y  L+RGLC    + ++      + + G+ P
Sbjct: 191 GCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYP 250

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N +TY+ L++   K      A++L  D++ +G  P++V++ +L+ GLCK G  + A   F
Sbjct: 251 NVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLF 310

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++      PN+  YN L+ + C  G   EA  L  E++  + SP + TY+ILI  L   
Sbjct: 311 VNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSV 370

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            +T+ A  + ++M K     ++ +YN +I   C EGK+D  ++   QM     +PN  T+
Sbjct: 371 SRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITF 430

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           + L    C +  +Q A  I   +  K  S     Y  +I   C+ G   +A +L  +M  
Sbjct: 431 STLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLD 490

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY----------KPDVDN---FNA 487
            G TP+ YT S L+ GLC +G I +ALE+F    E+            KP + N   + A
Sbjct: 491 NGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTA 550

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           L+ GLC+  +   ++++F  M   G  P+E  Y +++ G+
Sbjct: 551 LIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 177/385 (45%), Gaps = 27/385 (7%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D+K+ +A      M   G  P+V     L+   CK    K+A+++ + M+  G++PD  +
Sbjct: 230 DNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVT 289

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L++ LCK G +  A  L   M  +    N   YNSL+   C +G++++++     L 
Sbjct: 290 FGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELE 349

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +  + P+ FTYS L+           A  + + +  +G   N V+YN L+ G CKEG+ +
Sbjct: 350 RFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+     +   G EPNV++++ L+   C     + A  + +EM     SP +VTY  +I
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMI 469

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH---R 372
                +G    ALK+  +M+     P+  + + ++  LC +GK+   ++   +       
Sbjct: 470 DGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTP 529

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           RC  + G                        G+K + +    Y  +I  LC+ G+  +A 
Sbjct: 530 RCNVDAG------------------------GSKPSLTNHVAYTALIHGLCQDGQFSKAV 565

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGL 457
           +L  +M +YG  PD   Y  ++RGL
Sbjct: 566 KLFSDMRRYGLQPDEVIYVVMLRGL 590



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 159/379 (41%), Gaps = 37/379 (9%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            Y  L+  LC +  + ++L    ++   G        + LL    K        ++ +++
Sbjct: 117 VYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEM 173

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           I+ G  P+++++  L+ G C++G    A   F ++  KG  P V+ Y IL+R LC + + 
Sbjct: 174 ISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKI 233

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           EEA  +   M      P + TYN L+           AL++  +M+     P   ++  +
Sbjct: 234 EEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGIL 293

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNS 409
           I  LC  G++         M      PN   YN L                         
Sbjct: 294 IDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL------------------------- 328

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                    I + C+ G   +A  L  E+ ++  +PD +TYS LIRGLC     EEA  I
Sbjct: 329 ---------IDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNI 379

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M +     +   +N+L+ G CK  + D +LE+   M E G  PN  T++ L++G   
Sbjct: 380 FEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCK 439

Query: 530 QDELELSAEVLKELQLRQV 548
              L+ +  +  E+ ++ +
Sbjct: 440 IRNLQAAMGIYSEMVIKSL 458



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 39/318 (12%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           PN+  Y  L+  LCK    EEA+  +  +   G    + + N+LL  L   GR+E    +
Sbjct: 115 PNV--YGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRI 169

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             EM     SP+++T+  LI      G    A ++ DEM      P+   Y  +I  LCS
Sbjct: 170 YEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCS 229

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           + K++        M      PN  TYN L                               
Sbjct: 230 DNKIEEAESMHRAMREVGVYPNVYTYNTL------------------------------- 258

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
              +   C+     QA +L  +M   G  PD  T+  LI GLC  G ++ A  +FV M +
Sbjct: 259 ---MDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIK 315

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
           +   P++  +N+L+   CK      ++ +F  +      P+  TY+IL+ G+      E 
Sbjct: 316 FSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEE 375

Query: 536 SAEVLKELQLRQVVSESA 553
           +  + +++    +++ S 
Sbjct: 376 AGNIFEKMTKEGILANSV 393



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 28/212 (13%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K++ A     +M   G +P+V+  + L+   CK   ++ A+ +   MV   + PD  
Sbjct: 404 KEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVV 463

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT +++  CK G++  A++L   M D G   N  T + L+ GLC  G ++ +L+     
Sbjct: 464 TYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEK 523

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL---VSYNVLLTGLCKE 251
           I+    P                          ++ A G KP+L   V+Y  L+ GLC++
Sbjct: 524 IEFQ-TPRC------------------------NVDAGGSKPSLTNHVAYTALIHGLCQD 558

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           G+  +A++ F D+   G +P+ V Y ++LR L
Sbjct: 559 GQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 23/281 (8%)

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+ FF   P K    N+  Y+ ++  L        A  LL ++            N++ 
Sbjct: 45  KALEFFNAAPEK----NIQLYSAIIHVLVGSKLLSHARYLLNDL----------VQNLVK 90

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR--R 373
               YH     A   L  +   +F P+   Y  +I  LC   K++LV + L  M+H+   
Sbjct: 91  SHKPYHA-CQLAFSELSRLKSSKFTPNV--YGELIIVLC---KMELVEEAL-SMYHKVGA 143

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
               +     L +L   G+ +  + I + + +   S     +  +I   CR+G   +A +
Sbjct: 144 ALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQE 203

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  EM   G  P    Y+ LIRGLC +  IEEA  +   M E    P+V  +N L+ G C
Sbjct: 204 MFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYC 263

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           K      +L ++Q M+ +G +P+  T+ IL++G+    E++
Sbjct: 264 KLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMK 304


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 242/487 (49%), Gaps = 5/487 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  +  ++ D    +  M   G  P +     LL DL +A+ +    KV   M  +GI 
Sbjct: 181 DTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGIS 240

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L+   CK  ++  A ++VE+M + G   N VTYN+L+ GLC  G + ++  +
Sbjct: 241 PDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGY 300

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   GLVP+ FTY  ++    K      A  LLD++   G  PN+V Y+ L+ G  +
Sbjct: 301 KKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMR 360

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +G  +EA +  +++ + G +PN ++Y+ L+R LC  GR   A+ +L +M         +T
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420

Query: 311 YNILI-GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           YN++I G L  H K + A  +L+EM KG   P+  +Y+ II  LC  G+ +     L+QM
Sbjct: 421 YNLVIEGHLRQHNK-EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479

Query: 370 FHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGK 427
                KPN   Y  L +  C  G    A   ++ +  ++N +P  + Y  +I  L   GK
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKM-TRENLTPDLYCYNSLIIGLSNVGK 538

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A +   EM + GF P+ +TY  LI G  M G +E+A ++   M      P+   +  
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           +L G  KS   +      + M+EKG MP+   Y I++  ++    ++ +  VL  ++   
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658

Query: 548 VVSESAV 554
           +V +S +
Sbjct: 659 LVPDSLI 665



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 224/510 (43%), Gaps = 37/510 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R    ++AF  ++ M + G +P+ +   NL+  LCK  +M +A ++++ M   G +
Sbjct: 356 DGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYM 415

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  ++    ++ N   A  L+ +M   G   N  TY+ ++ GLC +G   ++   
Sbjct: 416 ADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGL 475

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+++I  GL PNAF Y+ L+    +E     A + L  +  +   P+L  YN L+ GL  
Sbjct: 476 LEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSN 535

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EAI ++ ++  KGF+PN  +Y  L+    M G  E+A +LL +M     +P    
Sbjct: 536 VGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFI 595

Query: 311 -----------------------------------YNILIGSLAYHGKTDHALKVLDEMV 335
                                              Y I+I +L+  G    A+ VL  + 
Sbjct: 596 YAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIE 655

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           K    P +  Y  +I+  C    ++  V  LD+M  +  +P    YN L    C    + 
Sbjct: 656 KNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDIS 715

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            A  I  S+  K        Y  +I   C+ G    A  L  EM   G  PD++ YS L 
Sbjct: 716 HARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLA 775

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G    G +++AL I   M    Y   + +FN L+ G CK  +   +++   +M++K  +
Sbjct: 776 AGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIV 834

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
           P+  T   +V G+    +L  +  +  ELQ
Sbjct: 835 PSLLTVENIVIGLGEAGKLSEAHTIFVELQ 864



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 19/309 (6%)

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEM------------------DGGDRSPTIVTYN 312
           P   ++  L  SLC  G + +AN LL +M                   G D+    V  +
Sbjct: 118 PAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLD 177

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +L+ +    G+     +V+  M      PS    N ++  L     +DL+ K    M   
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGA 237

Query: 373 RCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+  TY+ L    C V  ++ A  +++ +     S     Y  +I  LCR G   +A
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F    EM  YG  PD +TY ++I GLC  G  ++A  +   M      P+V  ++ L+ G
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             +    D + ++ + M   G  PN+ TY  L+ G+     +  ++ +LK++     +++
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417

Query: 552 SAVERLVMQ 560
           +    LV++
Sbjct: 418 TMTYNLVIE 426


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 229/479 (47%), Gaps = 6/479 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G +P+V     LL  LCK N++  A K++  M S G  PD  SYT L++ LCK G 
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A +L        +  +   YN+L+ G+C      ++ Q LD ++ KG+ PN  +Y+ 
Sbjct: 232 VKEARELA-----MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++ A      V  ++ +L  + A+G  PNL ++  L+ G   +G + EA+ F+  +  +G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PNVV+YN L+  LC +    +A  +  +M+     P + TY+ LI   A  G  D A 
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAML 387
           +V + M+     P+  +Y  ++  LC     +     ++ M    C PN  T+N  +  L
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           CG G+V  A  +   +GN         Y  ++ SL +  +  +AF L+ +M   G   + 
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+++I G C  G++ EALE+   M     KPD    N ++   CK  + ++++++   
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDR 586

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGI 566
           +      P+   YT L+ GI     +E +   L+ +    +    A   +++++ F  +
Sbjct: 587 LSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNM 645



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 224/451 (49%), Gaps = 6/451 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++++++ A   L  M SKG  PD V  T L+  LCK  K+K+A    E+ +S    P   
Sbjct: 193 KNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA---RELAMS--FTPSVP 247

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+N +CK+     A QL+++M + G   N ++Y +++  L   GN+  SL  L ++
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G  PN  T++ L++  + + G H A+   D +I +G  PN+V+YN L+ GLC +   
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+  F  +   G  PNV +Y+ L+      G  + A+E+   M      P +V Y  +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  +   + A  +++ M      P+  ++N  I  LC  G+VD  +K  DQM +  C
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN L   L    +  EAF +++ + ++        Y  +I   C  G   +A +
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL +M   G  PD+ T + +I   C +G +  A+++   +    + PD+  + +L+ G+C
Sbjct: 548 LLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGIC 607

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
                + ++   + M+ +G  PN  T+ +LV
Sbjct: 608 THIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 203/456 (44%), Gaps = 8/456 (1%)

Query: 94  HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           H P   Q   ++  L    +M     +++ M   GI      +  ++    + G+   A+
Sbjct: 74  HTPLTYQM--MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQAL 131

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           +   +M+D+        YN ++  L               + + G+ PN FTY+ LL+A 
Sbjct: 132 KTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKAL 191

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K   V  A KLL ++ +KG  P+ VSY  L++ LCK G+ +EA    R+L +  F P+V
Sbjct: 192 CKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA----REL-AMSFTPSV 246

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
             YN L+  +C E  +EEA +LL EM      P +++Y  +I +L+  G  + +L VL +
Sbjct: 247 PVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAK 306

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
           M      P+  ++  +I     +G     +   D+M      PN   YN L   LC    
Sbjct: 307 MFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRS 366

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + +A ++   +           Y  +I    + G    A ++   M  +G  P+   Y+ 
Sbjct: 367 LGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTC 426

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           ++  LC   +  +A  +   M+  +  P+   FN  + GLC S R D +++VF  M   G
Sbjct: 427 MVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             PN TTY  L++ +        +  ++K+++ R +
Sbjct: 487 CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 180/384 (46%), Gaps = 1/384 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +++   +AF  L+ M++KG  P+V+  T ++  L  A  ++ ++ V+  M + G  P+  
Sbjct: 258 KEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLH 317

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L+     KG    A+   ++M   G   N V YN+L+ GLC   +L  ++   +++
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G  PN  TYS L++   K   +  A ++ + +I  G  PN+V+Y  ++  LC+    
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A     ++  +   PN V++N  ++ LC  GR + A ++  +M      P   TYN L
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + SL    +   A  ++ +M       +  +YN II   C  G +   ++ L +M  R  
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+  T N  +   C  GKV  A  ++  L   +       Y  +I+ +C      +A  
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGL 457
            L  M   G +P+  T++ L+R L
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHL 641



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 14/355 (3%)

Query: 30  PNLHSF-SLNKGFIRVLASTQVTISPKDSVYTK---PNRKPGNNNDTRH---RDHKLNDA 82
           PNLH+F SL KGF  +   +   +   D +  +   PN      N   H       L DA
Sbjct: 314 PNLHTFTSLIKGFF-LKGGSHEALDFWDRMIREGVVPNVVA--YNALMHGLCSKRSLGDA 370

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
                +M   G  P+V   + L+    KA  +  A +V   M++ G  P+  +YT +V+ 
Sbjct: 371 VSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV 430

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LC+      A  L+E M+    P NTVT+N+ ++GLC  G ++ +++  D++   G  PN
Sbjct: 431 LCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPN 490

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ LL++  K+R    A  L+ D+  +G + NLV+YN ++ G C  G   EA+    
Sbjct: 491 TTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLG 550

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  +G +P+ ++ NI++ + C +G+   A +L+  +  G   P I+ Y  LI  +  H 
Sbjct: 551 KMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHI 610

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCS----EGKVDLVVKCLDQMFHRR 373
             + A+  L  M+     P+ A++N ++  L S     G V  +   L   F  R
Sbjct: 611 GVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFETR 665



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 77/166 (46%)

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           ++Q +  +  S  ++ +  VI S  R G + QA +  Y M  +   P    Y+ ++  L 
Sbjct: 98  LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALL 157

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            E   +    I+  M++   +P+V  +N LL  LCK+ R D + ++   M  KG  P+E 
Sbjct: 158 DENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEV 217

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           +YT L+  +    +++ + E+         V  + +  +  +Y FE
Sbjct: 218 SYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFE 263


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 236/496 (47%), Gaps = 36/496 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  +  + N++   L  +VS+G   D++  T L+  LCK  K+ +A  +    +S    
Sbjct: 322 DTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHT 381

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++ LCK GNV  A Q++ +ME+     N VT++S++ GL   G + ++  +
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +  + ++G+ PN  TY  +++ ++K  G  AA+ +  +++ +G + N    + L+ GL K
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501

Query: 251 EGRTEEAIRFFRDLPSKG-----------------------------------FEPNVVS 275
            G+ E+A   FR++  +G                                     P+ V 
Sbjct: 502 NGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVV 561

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN+ +  LCM G+ +EA   L EM      P  VTYN +I + +  GKT  ALK+L+ M 
Sbjct: 562 YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +   +P+  +Y+ +I  L   G V+     L++M      P   T+  +   C  G+  +
Sbjct: 622 RSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSD 681

Query: 396 -AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
               I + + N    +    Y  ++  LC  G T +A  +L EM+  G  PD+ T+++LI
Sbjct: 682 LILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALI 741

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G    G ++ A   +  M  +   P+V  FN LL GL  + R   S  V   M ++G  
Sbjct: 742 LGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIE 801

Query: 515 PNETTYTILVEGIAHQ 530
           P+  TY ILV G   Q
Sbjct: 802 PSNLTYDILVTGYGKQ 817



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 238/553 (43%), Gaps = 73/553 (13%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP--DASSYTYLVNCL 143
           L  M  +G   D V    +L  LC+  ++ +A  + E+MV  G I   D   +  LV+  
Sbjct: 125 LAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGY 184

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK G++  A  + E+M+  G   + V YNSLV GLC  G ++ +   +D + + G+ PN 
Sbjct: 185 CKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNV 244

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+  +    +   V  A  L ++++ KG  P++V+ + L+ GLCK+GR  EA   FR+
Sbjct: 245 VTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFRE 304

Query: 264 LPSKGFEPNVVSYNILLRS-----------------------------------LCMEGR 288
           +   G  PN V+Y +L+ +                                   LC EG+
Sbjct: 305 MEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGK 364

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            +EA ++       + +P  VTY +LI +L   G  D A +VL EM +    P+  +++ 
Sbjct: 365 IDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSS 424

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL------------------AMLC-G 389
           II  L   G V      + +M  R   PN  TY  +                   MLC G
Sbjct: 425 IINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEG 484

Query: 390 V-----------------GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           V                 GK+++A A+ + +  +        Y  +I  L + G    AF
Sbjct: 485 VEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAF 544

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++  E+T+    PD+  Y+  I  LCM G  +EA      M+    KPD   +N ++   
Sbjct: 545 KVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQ 604

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            +  +T  +L++   M      PN  TY+ L+ G+     +E +  +L E+        S
Sbjct: 605 SREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTS 664

Query: 553 AVERLVMQYDFEG 565
              R V+Q   +G
Sbjct: 665 LTHRRVLQACSQG 677



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 227/514 (44%), Gaps = 36/514 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++ A   ++ M   G +P+VV  T  + + C+ N +  A  + E MV  G++PD  
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + LV  LCK G    A  L  +ME  G   N VTY  L+  L      N+SL  L  +
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G+V +   Y+ L++   KE  +  A  +    ++    PN V+Y VL+  LCK G  
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A +   ++  K   PNVV+++ ++  L   G   +A + + EM      P +VTY  +
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460

Query: 315 I-GSL----------AYH------------------------GKTDHALKVLDEMVKGRF 339
           I GS            YH                        GK + A  +  EM +   
Sbjct: 461 IDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGV 520

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFA 398
                +Y  +I  L   G +    K   ++  +   P+   YN  +  LC +GK +EA +
Sbjct: 521 LLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAES 580

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            ++ + +      Q  Y  +I +  R+GKT +A +LL  M +    P+  TYS+LI GL 
Sbjct: 581 FLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLF 640

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G +E+A  +   M    + P       +L    + RR+DL LE+ + M+  G   + T
Sbjct: 641 EAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADIT 700

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            Y  LV  + +      +  VL+E+  R +  ++
Sbjct: 701 VYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDT 734



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 209/435 (48%), Gaps = 3/435 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G + +     +L+  L K  K++KA  +   M   G++ D  +YT L++ L K GN
Sbjct: 480 MLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A ++ +++ +     + V YN  +  LCMLG   ++  FL+ +   GL P+  TY+ 
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++ A  +E     A+KLL+ +     KPNL++Y+ L+ GL + G  E+A     ++ S G
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659

Query: 269 FEPNVVSYNILLRSLCMEGRWEEAN-ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           F P  +++  +L++ C +GR  +   E+   M        I  YN L+  L Y+G T  A
Sbjct: 660 FSPTSLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKA 718

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
           + VL+EM      P   ++N +I      G +D      DQM +    PN  T+N L   
Sbjct: 719 MVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGG 778

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           L   G++ E+  ++  +  +        Y  ++T   ++    +A +L  EM   GF P 
Sbjct: 779 LESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPK 838

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY++LI      G++ +A E+F  M+     P    ++ L+ G  K R      +  +
Sbjct: 839 VSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLK 898

Query: 507 MMIEKGQMPNETTYT 521
            M EKG  P++ T +
Sbjct: 899 DMKEKGFSPSKGTLS 913



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 197/421 (46%), Gaps = 4/421 (0%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  SY  +++   ++G +     L E M   G P + VT N+++ GLC  G ++++    
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEALLAE-MCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 192 DRLIQKGLVP--NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           + +++ G +   +   ++ L++   K   +  A  + + + A+G   ++V YN L+ GLC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           + G  + A      +   G EPNVV+Y + +   C     ++A  L  EM      P +V
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T + L+G L   G+   A  +  EM K    P+  +Y  +I  L    + +  +  L ++
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             R    +   Y  L   LC  GK+ EA  + +   +  ++     Y  +I +LC+ G  
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A Q+L EM +   +P+  T+SS+I GL   G + +A +    M+E    P+V  +  +
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + G  K    + +L+V+  M+ +G   N+     LV G+    ++E +  + +E+  R V
Sbjct: 461 IDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGV 520

Query: 549 V 549
           +
Sbjct: 521 L 521



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 80  NDAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +D  L++ E M++ G   D+     L+  LC     +KA+ V+E M   GI PD  ++  
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+    K G++  A    ++M  +G   N  T+N+L+ GL   G + +S   L+ + ++G
Sbjct: 740 LILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG 799

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+  TY  L+    K+     A++L  +++ KG  P + +YN L++   K G   +A 
Sbjct: 800 IEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAK 859

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ ++G  P   +Y+IL+          E  + L +M     SP+  T + +  + 
Sbjct: 860 ELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAF 919

Query: 319 AYHGKTDHALKVLDEMVK 336
           +  G +  A ++L  + K
Sbjct: 920 SKPGMSWEARRLLKNLYK 937



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++AF   ++M+  G  P+V     LL  L  A ++ ++  V+  M   GI P   +Y  
Sbjct: 750 LDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDI 809

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV    K+ N   A++L  +M   G+     TYN+L+     +G ++Q+ +  + +  +G
Sbjct: 810 LVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRG 869

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++P + TY  L+    K R      K L D+  KG  P+  + + +     K G + EA 
Sbjct: 870 VLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEAR 929

Query: 259 RFFRDL 264
           R  ++L
Sbjct: 930 RLLKNL 935



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 12/158 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLC------KANKMKKAIKVMEMMVSSGIIP 131
           ++ ++ + L  M  +G +P     +NL YD+       ++NK++ A+++   MV  G +P
Sbjct: 784 RIGESDMVLNEMKKRGIEP-----SNLTYDILVTGYGKQSNKVE-AVRLYCEMVGKGFLP 837

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
             S+Y  L++   K G +  A +L  +M++ G    + TY+ LV G   L N  +  +FL
Sbjct: 838 KVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFL 897

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
             + +KG  P+  T S +  A  K      A +LL ++
Sbjct: 898 KDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 234/519 (45%), Gaps = 58/519 (11%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  K  + D+   T L+   C  +K+  A+     +   G+ PD  ++  L++ LC +
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVE 162

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A+ L  +M +     N VT+ +L+ GLC  G + +++  LDR+++ GL P   TY
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222

Query: 207 SFLLEAAYKERGVHAAMKLL------DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
             +++   K+    +A+ LL        II     PN+V Y+ ++  LCK+GR  +A   
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++  KG  P++ +YN ++   C  GRW +A +LL EM     SP +VTYN LI +   
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK   A ++ DEM+     P+  +Y+ +I   C + ++D        M  + C PN  T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +N L    CG  ++ +   ++  +      +    Y  +I      G    A  LL EM 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNAL 488
             G  PD  T  +L+ GLC  G +++ALE+F VM++              +PDV  +N L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 489 LLGL-----------------------------------CKSRRTDLSLEVFQMMIEKGQ 513
           + GL                                   CK  R D + ++F  M  K  
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            PN  T+T L+ G      ++   E+  E+  R +V+ +
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 226/478 (47%), Gaps = 40/478 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RM+  G +P  +    ++  +CK      A+ ++  M   S IIP+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ LCK G    A  L  +M++ G   +  TYNS++ G C  G  + + Q L  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++++ + P+  TY+ L+ A  KE     A +L D+++ +G  PN ++Y+ ++ G CK+ R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F  + +KG  PN++++N L+   C   R ++  ELL EM          TYN 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +L EM+     P   + + ++  LC  GK+              
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK------------- 482

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS-------PQ-EFYKYVITSLCRK 425
                                E F ++Q      ++S       P  + Y  +I+ L  +
Sbjct: 483 ------------------DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +A +L  EM   G  PD+ TYSS+I GLC +  ++EA ++F  M    + P+V  F
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             L+ G CK+ R D  LE+F  M  +G + N  TY  L+ G      +  + ++ +E+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 231/518 (44%), Gaps = 48/518 (9%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L DA      M+     P VV    L+  + +  +    I + + M    I  D 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+T L+ C C    + +A+    K+   G   + VT+N+L+ GLC+   ++++L    +
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK------------------ 235
           + +    PN  T++ L+    +E  +  A+ LLD ++  G +                  
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 236 ------------------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                             PN+V Y+ ++  LCK+GR  +A   F ++  KG  P++ +YN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            ++   C  GRW +A +LL EM     SP +VTYN LI +    GK   A ++ DEM+  
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA 396
              P+  +Y+ +I   C + ++D        M  + C PN  T+N L    CG  ++ + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             ++  +      +    Y  +I      G    A  LL EM   G  PD  T  +L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 457 LCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           LC  G +++ALE+F VM++              +PDV  +N L+ GL    +   + E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + M  +G +P+  TY+ +++G+  Q  L+ + ++   +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 180/399 (45%), Gaps = 12/399 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D + +DA      M  KG  PD+    +++   C + +   A ++++ M+   I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N   K+G    A +L ++M   G   NT+TY+S++ G C    L+ +   
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  PN  T++ L++     + +   M+LL ++   G   +  +YN L+ G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS----- 305
            G    A+   +++ S G  P++V+ + LL  LC  G+ ++A E+   M    +      
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 306 ------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P + TYNILI  L   GK   A ++ +EM      P   +Y+ +I  LC + ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D   +  D M  +   PN  T+  L    C  G+V +   +   +G +   +    Y  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           I    + G    A  +  EM   G  PD+ T  +++ GL
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 179/407 (43%), Gaps = 37/407 (9%)

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L  G   +  L  ++     +++   +P+   +  L+    +       + L   +  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            + ++ S+ +L+   C   +   A+  F  +   G  P+VV++N LL  LC+E R  EA 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L  +M      P +VT+  L+  L   G+   A+ +LD M++   +P+  +Y  I+  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 354 CSEGKVDLVVKCLDQM----------------FHRRCK--------------------PN 377
           C +G     +  L +M                    CK                    P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN + +  C  G+  +A  ++Q +  ++ S     Y  +I +  ++GK ++A +L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G  P++ TYSS+I G C +  ++ A  +F +M      P++  FN L+ G C ++
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R D  +E+   M E G + + TTY  L+ G     +L  + ++L+E+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 233/493 (47%), Gaps = 40/493 (8%)

Query: 98  VVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           + +   +L  L K N    AI   + M    I PD  ++  L+NC C  G++ +A  ++ 
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           K+   G+  +TVT  +L++GLC+ G + ++L F D +I KG   +  +Y  L+    K  
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE-------------------------- 251
              AA+++L  I     +PN+V YN ++  LCK+                          
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243

Query: 252 ---------GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
                    GR +EA+  F  +  K  +P+V ++NIL+  LC EG  ++A  +LA M   
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
                IVTYN L+       + + A  V + M +    P   SY+ +I  LC    VD  
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363

Query: 363 VKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
           V    +M  +   PN  TYN L   L   G++ +A+ ++  + N+   +    Y  ++ +
Sbjct: 364 VNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDA 423

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC+  +  +A  L+ ++   G  P+ YTY+ L+ GLC  G +++A  ++  +    Y  D
Sbjct: 424 LCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLD 483

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           V  +N ++ GLCK    D +L +   M + G +P+  TY  LV  +   D+ + + ++L+
Sbjct: 484 VKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLR 543

Query: 542 ELQLRQVVSESAV 554
           E+    +V  SAV
Sbjct: 544 EM----IVQGSAV 552



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 219/442 (49%), Gaps = 6/442 (1%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H  H LN AF  L ++   G  PD V  T L+  LC   K+++A+   + +++ G   D 
Sbjct: 111 HLGH-LNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQ 169

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            SY  L+N LCK G    A+Q++ K++      N V YN+++  LC    +  +      
Sbjct: 170 VSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSE 229

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +I K + P+  TY+ L+        +  A+ L + ++ K  KP++ ++N+L+ GLCKEG 
Sbjct: 230 MIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGE 289

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A      +  +G + N+V+YN L+    +  +  +A  +   M     +P + +Y+I
Sbjct: 290 MKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSI 349

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L      D A+ +  EM      P+  +YN +I  L   G++      +++M H R
Sbjct: 350 MINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM-HNR 408

Query: 374 CKPNEG-TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
            +P +  TY+ L   LC   +V +A  +I  + + Q   P  + Y  ++  LC+ G+   
Sbjct: 409 GQPADVITYSSLLDALCKNHQVDKAITLITKIKD-QGIQPNIYTYTILVDGLCKNGRLKD 467

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  +  ++   G+  D   Y+ ++ GLC EGL +EAL +   ME+    PD   +  L+ 
Sbjct: 468 AQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVR 527

Query: 491 GLCKSRRTDLSLEVFQMMIEKG 512
            L ++ + D ++++ + MI +G
Sbjct: 528 ALFENDKNDKAVKLLREMIVQG 549



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 70/128 (54%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H+++ A   + ++  +G +P++   T L+  LCK  ++K A  V + ++  G  
Sbjct: 422 DALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYH 481

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D   Y  +VN LCK+G    A+ LV KMED G   + VTY +LVR L      +++++ 
Sbjct: 482 LDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKL 541

Query: 191 LDRLIQKG 198
           L  +I +G
Sbjct: 542 LREMIVQG 549


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 230/475 (48%), Gaps = 21/475 (4%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           V  +NL   LC A K +KA  ++  M+S G IPD S+Y+ ++  LC    V  A  L E+
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+      +  TY  L+   C +G L Q+ ++ D +++ G  PN  TY+ L+ A  K R 
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF------RDLPSKGF--- 269
           + +A +L + ++++G  PN+V+Y  L+ G CK G+ E+A + +       D+P       
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 270 -------EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
                  +PN+ +Y  L+  LC   + +EA +LL  M      P  + Y+ LI      G
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A  V  +M +  + P+  +Y+ +I RL  + ++DL +K L +M    C PN   Y 
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +   LC VGK  EA+ ++  +  K        Y  +I    + GK  +  +L+ +M   
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P+  TY  LI   C  GL+++A ++   M++  +   +  +  ++ G   +R   +S
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIIS 863

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           L +   + E   +P    Y IL++       LEL+ E+ KE+      S SA ++
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMS--SCTSYSAADK 916



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 237/532 (44%), Gaps = 62/532 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   A+  +  M+SKG  PD    + ++  LC A+K+  A  + E M S+ ++PD  +YT
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK G +  A +  ++M   G   N VTY +L+        ++ + +  + ++ +
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 198 GLVPNAFTYSFLLEAAYK----ERG--VHAAMKLLDDI--------IAKGG--KPNLVSY 241
           G +PN  TY+ L++   K    E+   ++A M+   DI        I  G    PN+ +Y
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             L+ GLCK  + +EA      +  +G EPN + Y+ L+   C  G+ +EA  +  +M  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P + TY+ LI  L    + D ALKVL  M++    P+   Y  +I  LC  GK D 
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
             + +  M  + C PN  TY   AM+ G    GKV +   +++ +G K  +     Y+ +
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYT--AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 419 ITSLCRKGKTYQAFQLLYEMTKY--------------GF-------------------TP 445
           I   C  G    A QLL EM +               GF                    P
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVP 877

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD--YKPDVDNFNALLLGLCKSRRTDLSLE 503
               Y  LI   C  G +E ALE+   M         D D +++L+  L  + + D + E
Sbjct: 878 IIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFE 937

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           ++  MI++G +P  + +  LV+G+   +  E      + LQL   + +  V+
Sbjct: 938 LYADMIKRGGIPELSIFFYLVKGLIRINRWE------EALQLSDCICQMMVD 983



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 228/506 (45%), Gaps = 37/506 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM S    P+VV    LL    +  ++ +  +++ MM++ G  P    +  L++  C+
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCR 381

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD----------RLI 195
            G+  YA +L++KM D G     V YN L+ G+C     N+ L  LD           ++
Sbjct: 382 SGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG----NEKLPSLDVLELAEKAYGEML 437

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              +V N    S L            A  ++ ++++KG  P+  +Y+ ++  LC   + +
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A   F ++ S    P+V +Y IL+ S C  G  ++A +   EM     +P +VTY  LI
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK----------------- 358
            +     K   A ++ + M+     P+  +Y  +I   C  G+                 
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 359 --VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
             VD+  K  D        PN  TY  L   LC   KV+EA  ++  +  +        Y
Sbjct: 618 PDVDMYFKIDDGNIR---DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I   C+ GK  +A  +  +M++ G+ P+ YTYSSLI  L  +  ++ AL++   M E
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P+V  +  ++ GLCK  +TD +  +  MM EKG  PN  TYT +++G     +++ 
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 536 SAEVLKELQLRQVVSESAVERLVMQY 561
             E+++++  +         R+++ +
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINH 820



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 223/549 (40%), Gaps = 100/549 (18%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   N A  +L R+   G+KP  +    L+    +A+++  A  V   M  SG   D  
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +    V+ LCK G    A+ L+EK E   +  +TV Y  ++ GLC      +++ FL R+
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TY  LL    ++R +    ++L  +I +G  P+   +N L+   C+ G  
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL---------------------------------- 280
             A +  + +   G +P  V YNIL+                                  
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNK 445

Query: 281 -------RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
                  R LC  G++E+A  ++ EM      P   TY+ +IG L    K D+A  + +E
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--------- 384
           M      P   +Y  +I   C  G +    K  D+M    C PN  TY  L         
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 385 ---------AML------------------CGVGKVQEAFAIIQSL-------------- 403
                     ML                  C  G++++A  I   +              
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 404 ---GNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
              GN ++  P  F Y  ++  LC+  K  +A  LL  M+  G  P+   Y +LI G C 
Sbjct: 626 IDDGNIRD--PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G ++EA  +F  M E  Y P+V  +++L+  L K +R DL+L+V   M+E    PN   
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 520 YTILVEGIA 528
           YT +++G+ 
Sbjct: 744 YTEMIDGLC 752



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 215/471 (45%), Gaps = 28/471 (5%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM-------MVSSGIIPDAS 134
           A+  L++M   G +P  V    L+  +C   K+  ++ V+E+       M+ + ++ +  
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L  CLC  G    A  ++ +M   G+  +T TY+ ++  LC    ++ +    + +
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               +VP+ FTY+ L+++  K   +  A K  D+++  G  PN+V+Y  L+    K  + 
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F  + S+G  PNVV+Y  L+   C  G+ E+A ++ A M G    P +  Y   
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY--- 623

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                         K+ D  ++    P+  +Y  ++  LC   KV      LD M    C
Sbjct: 624 -------------FKIDDGNIRD---PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +PN   Y+ L    C VGK+ EA  +   +  +        Y  +I  L +  +   A +
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  M +    P+   Y+ +I GLC  G  +EA  +  +MEE    P+V  + A++ G  
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K+ + D  LE+ + M  KG  PN  TY +L+        L+ + ++L E++
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 10/413 (2%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C+ G    A++ + +++D GY  + +TYN+LVR       L+ +      +   G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              + +T    +    K      A+ L++    +  K + V Y  +++GLC+    EEA+
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAM 319

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F   + S    PNVV+Y ILL     + +      +L+ M      P+   +N LI + 
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMFHR 372
              G   +A K+L +M     +P    YN +I  +C   K+      +L  K   +M   
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
               N+   + LA  LCG GK ++A++II+ + +K        Y  VI  LC   K   A
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F L  EM      PD +TY+ LI   C  GL+++A + F  M      P+V  + AL+  
Sbjct: 500 FLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA 559

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             K+R+   + E+F+MM+ +G +PN  TYT L++G     ++E + ++   ++
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 15/296 (5%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +D +L+ A   L RM+     P+V+  T ++  LCK  K  +A ++M MM   G  
Sbjct: 714  DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  +YT +++   K G V   ++L+ +M   G   N VTY  L+   C  G L+ + Q 
Sbjct: 774  PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            LD + Q     +   Y  ++E   +E  +  ++ LLD+I      P + +Y +L+   CK
Sbjct: 834  LDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCK 891

Query: 251  EGRTEEAIRFFRDLPS----KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
             GR E A+   +++ S       + ++  Y+ L+ SL +  + ++A EL A+M      P
Sbjct: 892  AGRLELALELHKEMSSCTSYSAADKDL--YSSLIESLSLASKVDKAFELYADMIKRGGIP 949

Query: 307  TIVTYNILIGSLAYHGKTDHALKVLD-------EMVKGRFRPSAASYNPIIARLCS 355
             +  +  L+  L    + + AL++ D       + V+  F  S+  Y  +   LCS
Sbjct: 950  ELSIFFYLVKGLIRINRWEEALQLSDCICQMMVDFVREGFLGSSHDYEFLNWTLCS 1005



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 169/395 (42%), Gaps = 41/395 (10%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   + HK+ +A   L+ M  +G +P+ +    L+   CK  K+ +A  V   M   G  
Sbjct: 644  DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  +Y+ L++ L K   +  A++++ +M +     N + Y  ++ GLC +G  +++ + 
Sbjct: 704  PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            +  + +KG  PN  TY+ +++   K   V   ++L+  + AKG  PN V+Y VL+   C 
Sbjct: 764  MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             G  ++A +   ++    +  ++  Y  ++     E  +  +  LL E+      P I  
Sbjct: 824  AGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE--FIISLGLLDEIAENVAVPIIPA 881

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
            Y ILI S    G+ + AL++  EM       S  SY        S    DL    ++ + 
Sbjct: 882  YRILIDSFCKAGRLELALELHKEM------SSCTSY--------SAADKDLYSSLIESL- 926

Query: 371  HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
                         LA      KV +AF +   +  +        + Y++  L R  +  +
Sbjct: 927  ------------SLA-----SKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEE 969

Query: 431  AFQL-------LYEMTKYGFTPDSYTYSSLIRGLC 458
            A QL       + +  + GF   S+ Y  L   LC
Sbjct: 970  ALQLSDCICQMMVDFVREGFLGSSHDYEFLNWTLC 1004



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 145/362 (40%), Gaps = 63/362 (17%)

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y+ LL  L   G      +F R++  +  E      N+L+R  C  G W  A E L  + 
Sbjct: 165 YHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLK 224

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV--------------------KGRFR 340
                P+ +TYN L+       + D A  V  EM                      GR+R
Sbjct: 225 DLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWR 284

Query: 341 PSAA------------SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            + A             Y  +I+ LC     +  +  L +M    C PN  TY    +LC
Sbjct: 285 EALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR--ILLC 342

Query: 389 G------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           G      +G+ +   +++ + G   +   +  +  +I + CR G    A++LL +M   G
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPS---RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG 399

Query: 443 FTPDSYTYSSLIRGLC-------------MEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             P    Y+ LI G+C              E    E L+  VV+ +        N + L 
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKV-------NVSNLA 452

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             LC + + + +  + + M+ KG +P+ +TY+ ++  + +  +++ +  + +E++   VV
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512

Query: 550 SE 551
            +
Sbjct: 513 PD 514


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 234/519 (45%), Gaps = 58/519 (11%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  K  + D+     L+   C  +K+  A+     +   G+ PD  ++T L++ LC +
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE 162

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A+ L  +M +     N VT+ +L+ GLC  G + +++  LDR+++ GL P   TY
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222

Query: 207 SFLLEAAYKERGVHAAMKLL------DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
             +++   K+    +A+ LL        II     PN+V Y+ ++  LCK+GR  +A   
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++  KG  P++ +YN ++   C  GRW +A +LL EM     SP +VTYN LI +   
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK   A ++ DEM+     P+  +Y+ +I   C + ++D        M  + C PN  T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +N L    CG  ++ +   ++  +      +    Y  +I      G    A  LL EM 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNAL 488
             G  PD  T  +L+ GLC  G +++ALE+F VM++              +PDV  +N L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 489 LLGL-----------------------------------CKSRRTDLSLEVFQMMIEKGQ 513
           + GL                                   CK  R D + ++F  M  K  
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            PN  T+T L+ G      ++   E+  E+  R +V+ +
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 226/478 (47%), Gaps = 40/478 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RM+  G +P  +    ++  +CK      A+ ++  M   S IIP+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ LCK G    A  L  +M++ G   +  TYNS++ G C  G  + + Q L  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++++ + P+  TY+ L+ A  KE     A +L D+++ +G  PN ++Y+ ++ G CK+ R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F  + +KG  PN++++N L+   C   R ++  ELL EM          TYN 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +L EM+     P   + + ++  LC  GK+              
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK------------- 482

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS-------PQ-EFYKYVITSLCRK 425
                                E F ++Q      ++S       P  + Y  +I+ L  +
Sbjct: 483 ------------------DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +A +L  EM   G  PD+ TYSS+I GLC +  ++EA ++F  M    + P+V  F
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             L+ G CK+ R D  LE+F  M  +G + N  TY  L+ G      +  + ++ +E+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 229/518 (44%), Gaps = 48/518 (9%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L DA      M+     P VV    L+  + +  +    I + + M    I  D 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+  L+ C C    + +A+    K+   G   + VT+ +L+ GLC+   ++++L    +
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQ 174

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK------------------ 235
           + +    PN  T++ L+    +E  +  A+ LLD ++  G +                  
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 236 ------------------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                             PN+V Y+ ++  LCK+GR  +A   F ++  KG  P++ +YN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            ++   C  GRW +A +LL EM     SP +VTYN LI +    GK   A ++ DEM+  
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA 396
              P+  +Y+ +I   C + ++D        M  + C PN  T+N L    CG  ++ + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             ++  +      +    Y  +I      G    A  LL EM   G  PD  T  +L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 457 LCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           LC  G +++ALE+F VM++              +PDV  +N L+ GL    +   + E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + M  +G +P+  TY+ +++G+  Q  L+ + ++   +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 180/399 (45%), Gaps = 12/399 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D + +DA      M  KG  PD+    +++   C + +   A ++++ M+   I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N   K+G    A +L ++M   G   NT+TY+S++ G C    L+ +   
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  PN  T++ L++     + +   M+LL ++   G   +  +YN L+ G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS----- 305
            G    A+   +++ S G  P++V+ + LL  LC  G+ ++A E+   M    +      
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 306 ------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P + TYNILI  L   GK   A ++ +EM      P   +Y+ +I  LC + ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D   +  D M  +   PN  T+  L    C  G+V +   +   +G +   +    Y  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           I    + G    A  +  EM   G  PD+ T  +++ GL
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 179/407 (43%), Gaps = 37/407 (9%)

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L  G   +  L  ++     +++   +P+   +  L+    +       + L   +  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            + ++ S+N+L+   C   +   A+  F  +   G  P+VV++  LL  LC+E R  EA 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L  +M      P +VT+  L+  L   G+   A+ +LD M++   +P+  +Y  I+  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 354 CSEGKVDLVVKCLDQM----------------FHRRCK--------------------PN 377
           C +G     +  L +M                    CK                    P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN + +  C  G+  +A  ++Q +  ++ S     Y  +I +  ++GK ++A +L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G  P++ TYSS+I G C +  ++ A  +F +M      P++  FN L+ G C ++
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R D  +E+   M E G + + TTY  L+ G     +L  + ++L+E+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 230/475 (48%), Gaps = 21/475 (4%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           V  +NL   LC A K +KA  ++  M+S G IPD S+Y+ ++  LC    V  A  L E+
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+      +  TY  L+   C +G L Q+ ++ D +++ G  PN  TY+ L+ A  K R 
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF------RDLPSKGF--- 269
           + +A +L + ++++G  PN+V+Y  L+ G CK G+ E+A + +       D+P       
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 270 -------EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
                  +PN+ +Y  L+  LC   + +EA +LL  M      P  + Y+ LI      G
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A  V  +M +  + P+  +Y+ +I RL  + ++DL +K L +M    C PN   Y 
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +   LC VGK  EA+ ++  +  K        Y  +I    + GK  +  +L+ +M   
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P+  TY  LI   C  GL+++A ++   M++  +   +  +  ++ G   +R   +S
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIIS 863

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           L +   + E   +P    Y IL++       LEL+ E+ KE+      S SA ++
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMS--SCTSYSAADK 916



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 235/503 (46%), Gaps = 35/503 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   A+  +  M+SKG  PD    + ++  LC A+K+  A  + E M S+ ++PD  +YT
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK G +  A +  ++M   G   N VTY +L+        ++ + +  + ++ +
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 198 GLVPNAFTYSFLLEAAYK----ERG--VHAAMKLLDDI--------IAKGG--KPNLVSY 241
           G +PN  TY+ L++   K    E+   ++A M+   DI        I  G    PN+ +Y
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             L+ GLCK  + +EA      +  +G EPN + Y+ L+   C  G+ +EA  +  +M  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P + TY+ LI  L    + D ALKVL  M++    P+   Y  +I  LC  GK D 
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
             + +  M  + C PN  TY   AM+ G    GKV +   +++ +G K  +     Y+ +
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYT--AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME-----GLIEEALEIFVVM 473
           I   C  G    A QLL EM +  +      Y  +I G   E     GL++E  E   V 
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAV- 876

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM--IEKGQMPNETTYTILVEGIAHQD 531
                 P +  +  L+   CK+ R +L+LE+ + M         ++  Y+ L+E ++   
Sbjct: 877 ------PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 532 ELELSAEVLKELQLRQVVSESAV 554
           +++ + E+  ++  R  + E ++
Sbjct: 931 KVDKAFELYADMIKRGGIPELSI 953



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 228/506 (45%), Gaps = 37/506 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM S    P+VV    LL    +  ++ +  +++ MM++ G  P    +  L++  C+
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCR 381

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD----------RLI 195
            G+  YA +L++KM D G     V YN L+ G+C     N+ L  LD           ++
Sbjct: 382 SGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG----NEKLPSLDVLELAEKAYGEML 437

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              +V N    S L            A  ++ ++++KG  P+  +Y+ ++  LC   + +
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A   F ++ S    P+V +Y IL+ S C  G  ++A +   EM     +P +VTY  LI
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK----------------- 358
            +     K   A ++ + M+     P+  +Y  +I   C  G+                 
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 359 --VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
             VD+  K  D        PN  TY  L   LC   KV+EA  ++  +  +        Y
Sbjct: 618 PDVDMYFKIDDGNIR---DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I   C+ GK  +A  +  +M++ G+ P+ YTYSSLI  L  +  ++ AL++   M E
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P+V  +  ++ GLCK  +TD +  +  MM EKG  PN  TYT +++G     +++ 
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 536 SAEVLKELQLRQVVSESAVERLVMQY 561
             E+++++  +         R+++ +
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINH 820



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 223/549 (40%), Gaps = 100/549 (18%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   N A  +L R+   G+KP  +    L+    +A+++  A  V   M  SG   D  
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +    V+ LCK G    A+ L+EK E   +  +TV Y  ++ GLC      +++ FL R+
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TY  LL    ++R +    ++L  +I +G  P+   +N L+   C+ G  
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL---------------------------------- 280
             A +  + +   G +P  V YNIL+                                  
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNK 445

Query: 281 -------RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
                  R LC  G++E+A  ++ EM      P   TY+ +IG L    K D+A  + +E
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--------- 384
           M      P   +Y  +I   C  G +    K  D+M    C PN  TY  L         
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 385 ---------AML------------------CGVGKVQEAFAIIQSL-------------- 403
                     ML                  C  G++++A  I   +              
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 404 ---GNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
              GN ++  P  F Y  ++  LC+  K  +A  LL  M+  G  P+   Y +LI G C 
Sbjct: 626 IDDGNIRD--PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G ++EA  +F  M E  Y P+V  +++L+  L K +R DL+L+V   M+E    PN   
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 520 YTILVEGIA 528
           YT +++G+ 
Sbjct: 744 YTEMIDGLC 752



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 206/414 (49%), Gaps = 21/414 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A    E M+S+G  P+VV  T L+   CK+ +++KA ++   M  +  IPD  
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVD 621

Query: 135 SY--------------TY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
            Y              TY  LV+ LCK   V  A  L++ M   G   N + Y++L+ G 
Sbjct: 622 MYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGF 681

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C +G L+++     ++ ++G  PN +TYS L++  +K++ +  A+K+L  ++     PN+
Sbjct: 682 CKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNV 741

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           + Y  ++ GLCK G+T+EA R    +  KG  PNVV+Y  ++      G+ ++  EL+ +
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQ 801

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M     +P  VTY +LI      G  D A ++LDEM +  +    A Y  +I     E  
Sbjct: 802 MGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFI 861

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN--KQNSSPQEFY 415
           + L +  LD++      P    Y  L    C  G+++ A  + + + +    +++ ++ Y
Sbjct: 862 ISLGL--LDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLY 919

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
             +I SL    K  +AF+L  +M K G  P+   +  L++GL      EEAL++
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 215/471 (45%), Gaps = 28/471 (5%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM-------MVSSGIIPDAS 134
           A+  L++M   G +P  V    L+  +C   K+  ++ V+E+       M+ + ++ +  
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L  CLC  G    A  ++ +M   G+  +T TY+ ++  LC    ++ +    + +
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               +VP+ FTY+ L+++  K   +  A K  D+++  G  PN+V+Y  L+    K  + 
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F  + S+G  PNVV+Y  L+   C  G+ E+A ++ A M G    P +  Y   
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY--- 623

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                         K+ D  ++    P+  +Y  ++  LC   KV      LD M    C
Sbjct: 624 -------------FKIDDGNIRD---PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +PN   Y+ L    C VGK+ EA  +   +  +        Y  +I  L +  +   A +
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  M +    P+   Y+ +I GLC  G  +EA  +  +MEE    P+V  + A++ G  
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K+ + D  LE+ + M  KG  PN  TY +L+        L+ + ++L E++
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 10/413 (2%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C+ G    A++ + +++D GY  + +TYN+LVR       L+ +      +   G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              + +T    +    K      A+ L++    +  K + V Y  +++GLC+    EEA+
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAM 319

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F   + S    PNVV+Y ILL     + +      +L+ M      P+   +N LI + 
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMFHR 372
              G   +A K+L +M     +P    YN +I  +C   K+      +L  K   +M   
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
               N+   + LA  LCG GK ++A++II+ + +K        Y  VI  LC   K   A
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F L  EM      PD +TY+ LI   C  GL+++A + F  M      P+V  + AL+  
Sbjct: 500 FLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA 559

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             K+R+   + E+F+MM+ +G +PN  TYT L++G     ++E + ++   ++
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 8/266 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L RM+     P+V+  T ++  LCK  K  +A ++M MM   G  
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT +++   K G V   ++L+ +M   G   N VTY  L+   C  G L+ + Q 
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD + Q     +   Y  ++E   +E  +  ++ LLD+I      P + +Y +L+   CK
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCK 891

Query: 251 EGRTEEAIRFFRDLPS----KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            GR E A+   +++ S       + ++  Y+ L+ SL +  + ++A EL A+M      P
Sbjct: 892 AGRLELALELHKEMSSCTSYSAADKDL--YSSLIESLSLASKVDKAFELYADMIKRGGIP 949

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLD 332
            +  +  L+  L    + + AL++ D
Sbjct: 950 ELSIFFYLVKGLIRINRWEEALQLSD 975



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 145/362 (40%), Gaps = 63/362 (17%)

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y+ LL  L   G      +F R++  +  E      N+L+R  C  G W  A E L  + 
Sbjct: 165 YHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLK 224

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK--------------------GRFR 340
                P+ +TYN L+       + D A  V  EM                      GR+R
Sbjct: 225 DLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWR 284

Query: 341 PSAA------------SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            + A             Y  +I+ LC     +  +  L +M    C PN  TY    +LC
Sbjct: 285 EALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR--ILLC 342

Query: 389 G------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           G      +G+ +   +++ + G   +   +  +  +I + CR G    A++LL +M   G
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPS---RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG 399

Query: 443 FTPDSYTYSSLIRGLC-------------MEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             P    Y+ LI G+C              E    E L+  VV+ +        N + L 
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKV-------NVSNLA 452

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             LC + + + +  + + M+ KG +P+ +TY+ ++  + +  +++ +  + +E++   VV
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512

Query: 550 SE 551
            +
Sbjct: 513 PD 514


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 243/492 (49%), Gaps = 37/492 (7%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            ++++AF+  E M   G +P+V+  + LL  LCKA ++ +A ++ E MV    +PD  +Y
Sbjct: 158 ERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL-QFLDRLI 195
           T  V  LCK   V  A     KM   G   + V +++++  LC  G+  ++  Q ++ L 
Sbjct: 218 TSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLC 277

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G++                     A K  +++I++   P+   +N L+  +CK  R  
Sbjct: 278 RSGMLDE-------------------ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 256 EAIRFFRDLPS-KGF--EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + +  F+ + S K F   PN+ +YNI++ +LC   + +EA EL+ EM     SP +VTY+
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+  L   GK D A  +L+EM K    P + +   I+  L   GKVD  +  L+ M  R
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
              P+  TYN  L  LC  G++ EA   +  +   +  +P  F Y  +IT+LCR G+   
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK-CTPDVFSYTIIITALCRSGQAAG 497

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  +  EM K G  PD+  Y SL+ GL   GL + ALE+   ++    KPD      ++ 
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVD 554

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           GLCK+ + + + EV + M + G   +  TY  +V G      L    +V K  QL    S
Sbjct: 555 GLCKAGKAEDACEVVERMADAGFPADAFTYINVVRG------LRKLGKVDKARQLVDDAS 608

Query: 551 E--SAVERLVMQ 560
           E  ++VERL M+
Sbjct: 609 ETHTSVERLSME 620



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 238/478 (49%), Gaps = 23/478 (4%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+ + ++M  +G+ PD    + +L  LCKA ++ KA +++  +  SG+  +  +Y+ +++
Sbjct: 57  AYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVID 116

Query: 142 CLCKKGNVGYAMQLVEKME-DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             CK   V  A+++ + M    G   + VT+NSL++GLC    ++++    + + + G  
Sbjct: 117 GCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE 176

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN  +YS LL+   K   +  A +L ++++ K   P+LV+Y   +TGLCK  R  EA   
Sbjct: 177 PNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDC 236

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            R + +KG + + V+++ ++  LC +G  EEA                   N +I  L  
Sbjct: 237 CRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ------------------NQMIEHLCR 278

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD---LVVKCLDQMFHRRCKPN 377
            G  D A K  +EM+     PSA  +N +I  +C   ++    L+ + +  M    C PN
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN +   LC   ++ EA  ++  + N   S     Y  ++  LC+ GK  +A  LL 
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM+K G  PDS+T +S++  L   G ++ AL     M+     PD+  +N LL GLCK+ 
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           R D ++     M+     P+  +YTI++  +    +   +  + +E+  R V+ ++ +
Sbjct: 459 RIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 181/355 (50%), Gaps = 9/355 (2%)

Query: 61  KPNRKPGNNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI 118
           K + +   N    H  R   L++A    E M+S+ H P       L++ +CK+ ++   +
Sbjct: 262 KGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGV 321

Query: 119 KVMEMMVSSG---IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
            + + M S       P+  +Y  +V+ LCK   +  A +LV +M +YG   + VTY++LV
Sbjct: 322 LLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALV 381

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
            GLC LG L+++   L+ + ++G+ P++FT + +L A  K   V  A+  L+ + A+G  
Sbjct: 382 DGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGST 441

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P+LV+YN LL GLCK GR +EAI F   + +    P+V SY I++ +LC  G+   A+ +
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             EM      P  V Y+ L+  LA +G  D AL++L   +    +P    +  ++  LC 
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVVDGLCK 558

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTY-NGLAMLCGVGKVQEAFAIIQSLGNKQNS 409
            GK +   + +++M       +  TY N +  L  +GKV +A  ++        S
Sbjct: 559 AGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTS 613



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 189/395 (47%), Gaps = 23/395 (5%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           GY  +  TYN  +  L        + +   ++ ++G  P+ FTYS +L    K   +  A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS-KGFEPNVVSYNILLR 281
            +LL  +   G K N+++Y+V++ G CK  R ++A+  F+ + +  G  P+VV++N LL+
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC   R  EA  L   M      P +++Y+ L+  L   G+ D A ++ +EMV+    P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAII 400
              +Y   +  LC   +V     C  +M  +  K +   ++  + +LC  G  +EA    
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA---- 268

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
                 QN         +I  LCR G   +A +   EM      P +  +++LI  +C  
Sbjct: 269 ------QNQ--------MIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKS 314

Query: 461 GLIEEALEIFV---VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
             + + + +F     M+E+   P+++ +N ++  LCK+++ D + E+   M   G  P+ 
Sbjct: 315 KRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDV 374

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            TY+ LV+G+    +L+ + ++L+E+    V  +S
Sbjct: 375 VTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDS 409



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 2/146 (1%)

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
           +GK+     +   LG ++      F Y   + +L +      A++   +M + G+ PD +
Sbjct: 15  LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDF 74

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TYS ++RGLC  G +++A E+   + E   K +V  ++ ++ G CK+ R D +LE+F+ M
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 509 IEKGQ-MPNETTYTILVEGIAHQDEL 533
              G  +P+  T+  L++G+   + +
Sbjct: 135 SAGGGCVPDVVTFNSLLKGLCSGERM 160


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 216/416 (51%), Gaps = 7/416 (1%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L + R ++  H PD +  T L++ L KA +++ A++V++ MVS+  +PD ++ T +V  L
Sbjct: 135 LGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSL 194

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ-FLDRLIQKGLVPN 202
           C    V  A +LVE+M   G   N +TY++LV GLC    L++++   L  + ++G  P+
Sbjct: 195 CLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPD 254

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TYS +++   K   +  A+ + +++      P  ++YN L+ G C+ G  +EAIR   
Sbjct: 255 IVTYSTVIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAGDMDEAIRLLG 311

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +      P+V++Y  L+ + C  GR ++A EL  +M     SP +VT+  L+  L   G
Sbjct: 312 KMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEG 371

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + + AL++L+E+ +    P+  +YN ++   C   +V    + +     R   PN  TYN
Sbjct: 372 RMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYN 431

Query: 383 GL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE--FYKYVITSLCRKGKTYQAFQLLYEMT 439
            L A  C  G+  +A   +  L ++    P     Y  ++ +LCR G+T  A Q   EM 
Sbjct: 432 ILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 491

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           + G+ P + T+++++  LC     ++A E+   M +Y + P     +A++   C++
Sbjct: 492 QRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRA 547



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 241/474 (50%), Gaps = 14/474 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++A   L  M S+G  P  +    ++  LC+A +++ A+ V   M +    PD  +YT 
Sbjct: 96  LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTK 154

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV+ L K G +  A+Q++++M    +  +  T   +V+ LC+   ++ + + ++ ++ +G
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214

Query: 199 LVPNAFTYSFLLEAAYK-ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           +  NA TYS L++   K ER   A   LL ++  +G  P++V+Y+ ++ GLCK GR  +A
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 274

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F ++      P  ++YN L+   C  G  +EA  LL +M   + +P ++TY  L+ +
Sbjct: 275 VDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSA 331

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D A ++  +MV  +  P   ++  ++  LC EG+++  ++ L+++  R C P 
Sbjct: 332 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391

Query: 378 EGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             TYN    G      V K +E  A  +S G   N+     Y  ++   CR G+T QA Q
Sbjct: 392 IYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVT---YNILVAGCCRAGRTDQALQ 448

Query: 434 LLYEM-TKYGFTPDSYT-YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            L ++ ++ G  P S   Y+ ++  LC +G  ++A++ +  M +  Y P    F  ++  
Sbjct: 449 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 508

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           LCK+ +   + E+ + MI+ G  P   T   +V        ++ + E+  EL+L
Sbjct: 509 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 231/474 (48%), Gaps = 9/474 (1%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L L+ +  +G  PD V+   +L +LC A     A+ + + M   G + + ++Y  L++ L
Sbjct: 32  LLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPL 90

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK   +  AM L+  M+  G    T+ +N ++ GLC  G L  +L    R +     P+ 
Sbjct: 91  CKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY-RQMNDAHPPDF 149

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ L+    K   +  A+++L ++++    P+  +  V++  LC   R ++A     +
Sbjct: 150 LTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEE 209

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELL-AEMDGGDRSPTIVTYNILIGSLAYHG 322
           +  +G   N ++Y+ L+  LC   R +EA  LL  E+     +P IVTY+ +I  L   G
Sbjct: 210 MLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG 269

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           +   A+ + +EM      P+A +YN +I   C  G +D  ++ L +M    C P+  TY 
Sbjct: 270 RLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYT 326

Query: 383 GL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L +  C +G++ +A+ + Q +   + S     +  ++  LC +G+   A +LL E+T+ 
Sbjct: 327 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 386

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P  YTY+ ++ G C    + +A E+        + P+   +N L+ G C++ RTD +
Sbjct: 387 GCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 446

Query: 502 LEVF-QMMIEKGQMPNETT-YTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           L+   Q+  E G  P     Y I+++ +      + + +  +E+  R  V  +A
Sbjct: 447 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAA 500



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 197/395 (49%), Gaps = 40/395 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSY 136
           +++DA   +E M+ +G   + +  + L+  LCK  ++ +A+ ++   V+  G  PD  +Y
Sbjct: 199 RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTY 258

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           + +++ LCK G +  A+ + E+M     PT  +TYNSL+ G C  G+++++++ L +++ 
Sbjct: 259 STVIDGLCKAGRLRDAVDIFEEMS--CAPT-AITYNSLIGGYCRAGDMDEAIRLLGKMVD 315

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
               P+  TY+ L+ A  K   +  A +L   ++A    P++V++  L+ GLC EGR E+
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+    ++  +G  P + +YN ++   C   +  +A EL+A+       P  VTYNIL+ 
Sbjct: 376 ALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVA 435

Query: 317 SLAYHGKTDHALKVLDEMVK--GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                G+TD AL+ LD++    G    S A Y  I+  LC +G+ D  V+  ++M  R  
Sbjct: 436 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGY 495

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            P   T                                  +  V+ +LC+  +  QA +L
Sbjct: 496 VPAAAT----------------------------------FATVVFALCKAHQPQQAHEL 521

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           L EM KYG TP   T  +++   C  G+I++A E+
Sbjct: 522 LEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 215/433 (49%), Gaps = 10/433 (2%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGY-AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
           M+ +G   D+S++  ++  L     + +    L++++ D G   + V  N+++  LC   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           +   ++   D++ + G V N  TY  L+    K R +  AM LL D+ ++G  P  + +N
Sbjct: 61  DTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           V++ GLC+ GR   A+  +R + +    P+ ++Y  L+  L   GR  +A ++L EM   
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P   T  +++ SL    + D A ++++EM+      +A +Y+ ++  LC   ++D  
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238

Query: 363 VKCL-DQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVI 419
           V  L  ++  R   P+  TY+  +  LC  G++++A  I + +    + +P    Y  +I
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM----SCAPTAITYNSLI 294

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              CR G   +A +LL +M      PD  TY++L+   C  G +++A E+F  M      
Sbjct: 295 GGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLS 354

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           PDV  F +L+ GLC   R + +LE+ + +  +G  P   TY  +V+G    +++  + E+
Sbjct: 355 PDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEEL 414

Query: 540 LKELQLRQVVSES 552
           + + + R  V  +
Sbjct: 415 VADFRSRGFVPNT 427



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 48/92 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   RD + +DA    E M+ +G+ P       +++ LCKA++ ++A +++E M+  G  
Sbjct: 472 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 531

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           P   +   +V+  C+ G +  A +L  ++  Y
Sbjct: 532 PGPGTCDAVVSAYCRAGMIQKADELASELRLY 563


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 229/479 (47%), Gaps = 6/479 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G +P+V     LL  LCK N++  A K++  M S G  PD  SYT L++ LCK G 
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A +L        +  +   YN+L+ G+C      ++ Q LD ++ KG+ PN  +Y+ 
Sbjct: 232 VKEARELA-----MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++ A      V  ++ +L  + A+G  PNL ++  L+ G   +G + EA+ F+  +  +G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PNVV+YN L+  LC +    +A  +  +M+     P + TY+ LI   A  G  D A 
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAML 387
           +V + M+     P+  +Y  ++  LC     +     ++ M    C PN  T+N  +  L
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           CG G+V  A  +   +GN         Y  ++ SL +  +  +AF L+ +M   G   + 
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+++I G C  G++ EALE+   M     KPD    N ++   CK  + ++++++   
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDR 586

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGI 566
           +      P+   YT L+ GI     +E +   L+ +    +    A   +++++ F  +
Sbjct: 587 LSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNM 645



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 224/451 (49%), Gaps = 6/451 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++++++ A   L  M SKG  PD V  T L+  LCK  K+K+A    E+ +S    P   
Sbjct: 193 KNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA---RELAMS--FTPSVP 247

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+N +CK+     A QL+++M + G   N ++Y +++  L   GN+  SL  L ++
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G  PN  T++ L++  + + G H A+   D +I +G  PN+V+YN L+ GLC +   
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+  F  +   G  PNV +Y+ L+      G  + A+E+   M      P +V Y  +
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  +   + A  +++ M      P+  ++N  I  LC  G+VD  +K  DQM +  C
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN L   L    +  EAF +++ + ++        Y  +I   C  G   +A +
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL +M   G  PD+ T + +I   C +G +  A+++   +    + PD+  + +L+ G+C
Sbjct: 548 LLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGIC 607

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
                + ++   + M+ +G  PN  T+ +LV
Sbjct: 608 THIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 203/456 (44%), Gaps = 8/456 (1%)

Query: 94  HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           H P   Q   ++  L    +M     +++ M   GI      +  ++    + G+   A+
Sbjct: 74  HTPLTYQM--MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQAL 131

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           +   +M+D+        YN ++  L               + + G+ PN FTY+ LL+A 
Sbjct: 132 KTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKAL 191

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K   V  A KLL ++ +KG  P+ VSY  L++ LCK G+ +EA    R+L +  F P+V
Sbjct: 192 CKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA----REL-AMSFTPSV 246

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
             YN L+  +C E  +EEA +LL EM      P +++Y  +I +L+  G  + +L VL +
Sbjct: 247 PVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAK 306

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
           M      P+  ++  +I     +G     +   D+M      PN   YN L   LC    
Sbjct: 307 MFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRS 366

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + +A ++   +           Y  +I    + G    A ++   M  +G  P+   Y+ 
Sbjct: 367 LGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTC 426

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           ++  LC   +  +A  +   M+  +  P+   FN  + GLC S R D +++VF  M   G
Sbjct: 427 MVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             PN TTY  L++ +        +  ++K+++ R +
Sbjct: 487 CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 180/384 (46%), Gaps = 1/384 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +++   +AF  L+ M++KG  P+V+  T ++  L  A  ++ ++ V+  M + G  P+  
Sbjct: 258 KEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLH 317

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L+     KG    A+   ++M   G   N V YN+L+ GLC   +L  ++   +++
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G  PN  TYS L++   K   +  A ++ + +I  G  PN+V+Y  ++  LC+    
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A     ++  +   PN V++N  ++ LC  GR + A ++  +M      P   TYN L
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + SL    +   A  ++ +M       +  +YN II   C  G +   ++ L +M  R  
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+  T N  +   C  GKV  A  ++  L   +       Y  +I+ +C      +A  
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGL 457
            L  M   G +P+  T++ L+R L
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHL 641



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 168/345 (48%), Gaps = 10/345 (2%)

Query: 30  PNLHSF-SLNKGFIRVLASTQVTISPKDSVYTK---PNRKPGNNNDTRH---RDHKLNDA 82
           PNLH+F SL KGF  +   +   +   D +  +   PN      N   H       L DA
Sbjct: 314 PNLHTFTSLIKGFF-LKGGSHEALDFWDRMIREGVVPNVVA--YNALMHGLCSKRSLGDA 370

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
                +M   G  P+V   + L+    KA  +  A +V   M++ G  P+  +YT +V+ 
Sbjct: 371 VSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV 430

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LC+      A  L+E M+    P NTVT+N+ ++GLC  G ++ +++  D++   G  PN
Sbjct: 431 LCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPN 490

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ LL++  K+R    A  L+ D+  +G + NLV+YN ++ G C  G   EA+    
Sbjct: 491 TTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLG 550

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  +G +P+ ++ NI++ + C +G+   A +L+  +  G   P I+ Y  LI  +  H 
Sbjct: 551 KMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHI 610

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
             + A+  L  M+     P+ A++N ++  L S       V+ LD
Sbjct: 611 GVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 77/166 (46%)

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           ++Q +  +  S  ++ +  VI S  R G + QA +  Y M  +   P    Y+ ++  L 
Sbjct: 98  LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALL 157

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            E   +    I+  M++   +P+V  +N LL  LCK+ R D + ++   M  KG  P+E 
Sbjct: 158 DENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEV 217

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           +YT L+  +    +++ + E+         V  + +  +  +Y FE
Sbjct: 218 SYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFE 263


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 242/503 (48%), Gaps = 10/503 (1%)

Query: 44  VLASTQVTI--SPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQA 101
           VLA T++ I  S  + VY    +  G       R  K+ +A    ERM     +P V+  
Sbjct: 62  VLAETRMDIDNSLLEGVYIGAMKSYG-------RKGKVQEAVDVFERMDFYNCEPSVLSY 114

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
             ++  L ++   K+A KV   M + GI+PD  ++T  +   C+      A++L+  M  
Sbjct: 115 NAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVS 174

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   N V Y ++V G        ++ +  + +++ G+ P+  T++ LL    K+  V  
Sbjct: 175 QGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQE 234

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           + +LL+ ++ KG   NL ++N+ + GLC++G    A+     +  +G  P+VV+YN L+ 
Sbjct: 235 SERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLIC 294

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC      EA + L ++  G   P   TYN LI      G   +A K+L   +   F P
Sbjct: 295 GLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVP 354

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
              +Y  +I  LC   ++D  +   +    +  KP    YN L   LC  G + +A  ++
Sbjct: 355 DEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMM 414

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +     SS    Y  VI  LC+ G    A  L+ +    G+ PD +T+++LI G C +
Sbjct: 415 NEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQ 474

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
             +E  ++I   M  +   PDV  +N++L GL K+ + +  +E F+ M+EKG +PN+ TY
Sbjct: 475 LKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITY 534

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
            IL E +    ++  + +++ E+
Sbjct: 535 NILTESLCKAGKVNEALDLVDEI 557



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 232/452 (51%), Gaps = 6/452 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A+     M+  G  PDV     LL+ LCK  +++++ +++  ++  G+  +  ++   +
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFI 258

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LC+KG +  AM +++ +   G   + VTYN+L+ GLC   N+ ++ ++L +L+  GL 
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE 318

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ FTY+ L++   K   +  A K+L   I KG  P+  +Y  L+ GLC+    + A+  
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F     KG +P V+ YN+L++ LC EG   +A +++ EM     S  I TYN++I  L  
Sbjct: 379 FNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCK 438

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G    A  ++++ +   + P   ++N +I   C + K++  ++ L++M+     P+  T
Sbjct: 439 MGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVIT 498

Query: 381 YNGLAMLCGVGKV---QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
           YN  ++L G+ K    ++     +++  K     +  Y  +  SLC+ GK  +A  L+ E
Sbjct: 499 YN--SVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDE 556

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKSR 496
           +   G TPD+ +++++I G    G ++ A ++F  M E+Y        +N ++    +  
Sbjct: 557 ILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKL 616

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
              +  ++F  M   G  P+  TY ++++G  
Sbjct: 617 DLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFC 648



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 244/487 (50%), Gaps = 10/487 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   L+ A   L+ ++ +G  PDVV    L+  LCK + + +A K +  +V+ G+ PD  
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK G +  A ++++     G+  +  TY SL+ GLC    ++++L   +  
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KGL P    Y+ L++   +E  +  A+++++++   G   ++ +YN+++ GLCK G  
Sbjct: 383 LGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCV 442

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A     D  +KG+ P+V ++N L+   C + + E   ++L +M     +P ++TYN +
Sbjct: 443 SDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSV 502

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L+   K +  ++  + MV+    P+  +YN +   LC  GKV+  +  +D++ ++  
Sbjct: 503 LNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGI 562

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNK-QNSSPQEFYKYVITSLCRKGKTYQAF 432
            P+  ++   ++     G ++ A+ + + +G + + S     Y  +I +   K   +   
Sbjct: 563 TPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGE 622

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L  EM   G  PD+YTY  +I G C+ G  +   +  + M E  + P +  F  ++  L
Sbjct: 623 KLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCL 682

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE--VLKELQLRQVVS 550
           C   R   ++++   M+  G +P       +V  I+  D+  ++A   V+++L  R  ++
Sbjct: 683 CVQHRVHEAVDIIHFMVHNGIVPE------VVNSISEADKKVVAAPKIVVEDLLKRSCIT 736

Query: 551 ESAVERL 557
             A E L
Sbjct: 737 YYAYELL 743



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 232/473 (49%), Gaps = 1/473 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM + G  PDV   T  +   C+  +   A++++  MVS G   +A +Y  +V    ++ 
Sbjct: 136 RMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEEN 195

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
               A +L   M   G   +  T+N L+  LC  G + +S + L+++++KG+  N FT++
Sbjct: 196 YRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFN 255

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             ++   ++  +  AM +LD +I +G  P++V+YN L+ GLCK     EA ++   L + 
Sbjct: 256 IFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNG 315

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G EP+  +YN L+   C  G  + A ++L         P   TY  LI  L  + + D A
Sbjct: 316 GLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRA 375

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAM 386
           L + +  +    +P+   YN +I  LC EG +   ++ +++M    C  +  TYN  +  
Sbjct: 376 LALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVING 435

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC +G V +A  ++     K        +  +I   C++ K     Q+L +M  +G TPD
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+S++ GL      E+ +E F  M E    P+   +N L   LCK+ + + +L++  
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            ++ KG  P+  ++  ++ G A+  +L+ + ++ + +  +  VS +     +M
Sbjct: 556 EILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIM 608



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 137/352 (38%), Gaps = 73/352 (20%)

Query: 256 EAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRW------------------------- 289
           +A+  F  +  + GF+ ++++Y  +++ L   G +                         
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIG 81

Query: 290 -----------EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
                      +EA ++   MD  +  P++++YN ++  L   G    A KV   M    
Sbjct: 82  AMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVG 141

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK----------------------- 375
             P   ++   I   C   +    ++ L+ M  + C+                       
Sbjct: 142 IVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAY 201

Query: 376 ------------PNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
                       P+  T+N  L  LC  G+VQE+  ++  +  K   S    +   I  L
Sbjct: 202 ELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGL 261

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           CRKG    A  +L  + + G TPD  TY++LI GLC    + EA +    +     +PD 
Sbjct: 262 CRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDG 321

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             +N L+ G CK      + ++ Q  I KG +P+E TY  L+ G+   DE++
Sbjct: 322 FTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEID 373


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 234/519 (45%), Gaps = 58/519 (11%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  K  + D+   T L+   C  +K+  A+     +   G+ PD  ++  L++ LC +
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVE 162

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A+ L  +M +     N VT+ +L+ GLC  G + +++  LDR+++ GL P   TY
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222

Query: 207 SFLLEAAYKERGVHAAMKLL------DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
             +++   K+    +A+ LL        II     PN+V Y+ ++  LCK+GR  +A   
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++  KG  P++ +YN ++   C  GRW +A +LL EM     SP +VTYN LI +   
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK   A ++ DEM+     P+  +Y+ +I   C + ++D        M  + C PN  T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +N L    CG  ++ +   ++  +      +    Y  +I      G    A  LL EM 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNAL 488
             G  PD  T  +L+ GLC  G +++ALE+F VM++              +PDV  +N L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 489 LLGL-----------------------------------CKSRRTDLSLEVFQMMIEKGQ 513
           + GL                                   CK  R D + ++F  M  K  
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            PN  T+T L+ G      ++   E+  E+  R +V+ +
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 226/478 (47%), Gaps = 40/478 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RM+  G +P  +    ++  +CK      A+ ++  M   S IIP+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ LCK G    A  L  +M++ G   +  TYNS++ G C  G  + + Q L  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++++ + P+  TY+ L+ A  KE     A +L D+++ +G  PN ++Y+ ++ G CK+ R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F  + +KG  PN++++N L+   C   R ++  ELL EM          TYN 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +L EM+     P   + + ++  LC  GK+              
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK------------- 482

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS-------PQ-EFYKYVITSLCRK 425
                                E F ++Q      ++S       P  + Y  +I+ L  +
Sbjct: 483 ------------------DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +A +L  EM   G  PD+ TYSS+I GLC +  ++EA ++F  M    + P+V  F
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             L+ G CK+ R D  LE+F  M  +G + N  TY  L+ G      +  + ++ +E+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 231/518 (44%), Gaps = 48/518 (9%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L DA      M+     P VV    L+  + +  +    I + + M    I  D 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+T L+ C C    + +A+    K+   G   + VT+N+L+ GLC+   ++++L    +
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK------------------ 235
           + +    PN  T++ L+    +E  +  A+ LLD ++  G +                  
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 236 ------------------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                             PN+V Y+ ++  LCK+GR  +A   F ++  KG  P++ +YN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            ++   C  GRW +A +LL EM     SP +VTYN LI +    GK   A ++ DEM+  
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA 396
              P+  +Y+ +I   C + ++D        M  + C PN  T+N L    CG  ++ + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             ++  +      +    Y  +I      G    A  LL EM   G  PD  T  +L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 457 LCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           LC  G +++ALE+F VM++              +PDV  +N L+ GL    +   + E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + M  +G +P+  TY+ +++G+  Q  L+ + ++   +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 180/399 (45%), Gaps = 12/399 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D + +DA      M  KG  PD+    +++   C + +   A ++++ M+   I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N   K+G    A +L ++M   G   NT+TY+S++ G C    L+ +   
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  PN  T++ L++     + +   M+LL ++   G   +  +YN L+ G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS----- 305
            G    A+   +++ S G  P++V+ + LL  LC  G+ ++A E+   M    +      
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 306 ------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P + TYNILI  L   GK   A ++ +EM      P   +Y+ +I  LC + ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D   +  D M  +   PN  T+  L    C  G+V +   +   +G +   +    Y  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           I    + G    A  +  EM   G  PD+ T  +++ GL
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 179/407 (43%), Gaps = 37/407 (9%)

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L  G   +  L  ++     +++   +P+   +  L+    +       + L   +  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            + ++ S+ +L+   C   +   A+  F  L   G  P+VV++N LL  LC+E R  EA 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L  +M      P +VT+  L+  L   G+   A+ +LD M++   +P+  +Y  I+  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 354 CSEGKVDLVVKCLDQM----------------FHRRCK--------------------PN 377
           C +G     +  L +M                    CK                    P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN + +  C  G+  +A  ++Q +  ++ S     Y  +I +  ++GK ++A +L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G  P++ TYSS+I G C +  ++ A  +F +M      P++  FN L+ G C ++
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R D  +E+   M E G + + TTY  L+ G     +L  + ++L+E+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 235/480 (48%), Gaps = 35/480 (7%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA    ++M+     P++     +L+ LCK   + +A  ++  ++  G+  +  +Y   
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LC+ G +  A++LV+ M  Y  P + VTYN+L+RGLC      +++ +L R++ +G 
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P+ FTY+ +++   K   V  A +LL D + KG  P+ V+Y  L+ GLC EG  E A+ 
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F +  +KG +P++V YN L++ LC++G    A +++ EM      P I TYNI+I  L 
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 409

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G    A  V+++ +   + P   ++N +I   C   K+D  ++ +++M+     P+  
Sbjct: 410 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 469

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           TYN                                   V+  LC+ GK  +  +   EM 
Sbjct: 470 TYNS----------------------------------VLNGLCKAGKVNEVNETFQEMI 495

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  P+  TY+ LI   C    +EEA ++ V M +    PD  +FN L+ G C++   +
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            +  +FQ + EKG      T+  L+   + +  + ++ ++  E+  +   ++S   R+++
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 615



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 226/470 (48%), Gaps = 6/470 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L DA    ERM      P       ++  L  A    +A KV   M+++G+ PD  
Sbjct: 65  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 124

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T  +   C       A++L+  +   G     V Y ++V GL   G+ + + Q  D++
Sbjct: 125 THTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQM 180

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   + PN   ++ +L A  K   V  A  LL  +I +G   NL +YN+ + GLC+ GR 
Sbjct: 181 LHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL 240

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA+R    + +    P+VV+YN L+R LC +   +EA   L  M      P   TYN +
Sbjct: 241 PEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 299

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           A ++L + V   F P   +Y  +I  LC+EG V+  ++  ++   +  
Sbjct: 300 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 359

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+   YN L   LC  G +  A  ++  +  +      + Y  VI  LC+ G    A  
Sbjct: 360 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 419

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           ++ +    G+ PD +T+++LI G C    ++ AL++   M EY   PD   +N++L GLC
Sbjct: 420 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLC 479

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K+ + +   E FQ MI KG  PN  TY IL+E     +++E +++V+ ++
Sbjct: 480 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 529



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 218/446 (48%), Gaps = 35/446 (7%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A L L +++ +G   ++      +  LC+A ++ +A+++++ M +  + PD  +Y  L+
Sbjct: 207 EAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLI 265

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCKK     AM  + +M + G   +  TYN+++ G C +  + ++ + L   + KG V
Sbjct: 266 RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFV 325

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY  L+     E  V  A++L ++  AKG KP++V YN L+ GLC +G    A++ 
Sbjct: 326 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 385

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++  +G  P++ +YNI++  LC  G   +A  ++ +       P + T+N LI     
Sbjct: 386 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 445

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K D AL++++ M +    P   +YN ++  LC  GKV+ V +   +M  + C PN  T
Sbjct: 446 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 505

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           YN L                                  I + CR  K  +A +++ +M++
Sbjct: 506 YNIL----------------------------------IENFCRSNKMEEASKVIVKMSQ 531

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD+ ++++LI G C  G +E A  +F  +EE  Y    D FN L+          +
Sbjct: 532 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 591

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEG 526
           + ++F  M+ KG   +  TY +L++G
Sbjct: 592 AEKIFDEMLSKGHRADSYTYRVLIDG 617



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 218/457 (47%), Gaps = 40/457 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A   L RM+++G  PD      ++   CK + +++A ++++  V  G +PD  +Y  L+
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N LC +G+V  A++L  + +  G   + V YNSLV+GLC+ G +  +LQ ++ + ++G  
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ ++    K   +  A  +++D I KG  P++ ++N L+ G CK  + + A++ 
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G  P+ ++YN +L  LC  G+  E NE   EM      P  +TYNILI +   
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 515

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K + A KV+ +M +    P A S+N +I   C  G +                  EG 
Sbjct: 516 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL------------------EG- 556

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
                          A+ + Q L  K  S+  + +  +I +   K   + A ++  EM  
Sbjct: 557 ---------------AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 601

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G   DSYTY  LI G C    ++ A    V M +  + P +  F  ++  L  + R   
Sbjct: 602 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 661

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           ++ +  +M++ G +P       +V+ I + D+ E++A
Sbjct: 662 AVGIIHIMVKIGVVPE------VVDTILNADKKEIAA 692



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 198/409 (48%), Gaps = 6/409 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y   +    + G +  A+   E+M+ +  P     YN+++  L      +Q+ +   R++
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
             G+ P+  T++  L +       H A++LL  +  +G     V+Y  ++ GL   G T 
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 171

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A + F  +      PN+ ++N +L +LC  G   EA  LL ++     S  + TYNI I
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G+   A++++D M +    P   +YN +I  LC +      +  L +M ++ C 
Sbjct: 232 RGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P++ TYN +    C +  VQEA  +++    K     Q  Y  +I  LC +G   +A +L
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             E    G  PD   Y+SL++GLC++GLI  AL++   M E    PD+  +N ++ GLCK
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                 +  V    I KG +P+  T+  L++G   + +L+ + ++++ +
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 459



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 190/438 (43%), Gaps = 6/438 (1%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +A +++ A+   E M      P A +Y  +++ L        A ++  +M   G   +  
Sbjct: 65  RAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLH 124

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T+   +R  C+    + +L+ L  L  +G    A  Y  ++   Y     H A +L D +
Sbjct: 125 THTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQM 180

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +     PNL ++N +L  LCK G   EA      +  +G   N+ +YNI +R LC  GR 
Sbjct: 181 LHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL 240

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            EA  L+  M      P +VTYN LI  L        A+  L  M+     P   +YN I
Sbjct: 241 PEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 299

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I   C    V    + L     +   P++ TY  L   LC  G V+ A  +      K  
Sbjct: 300 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGI 359

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  ++  LC +G    A Q++ EM + G  PD  TY+ +I GLC  G I +A  
Sbjct: 360 KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATV 419

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +        Y PDV  FN L+ G CK  + D +L++ + M E G  P+  TY  ++ G+ 
Sbjct: 420 VMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLC 479

Query: 529 HQDELELSAEVLKELQLR 546
              ++    E  +E+ L+
Sbjct: 480 KAGKVNEVNETFQEMILK 497



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 112/215 (52%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A   +ERM   G  PD +   ++L  LCKA K+ +  +  + M+  G  P+  +Y 
Sbjct: 448 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYN 507

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+   +  A +++ KM   G   + V++N+L+ G C  G+L  +     +L +K
Sbjct: 508 ILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G    A T++ L+ A   +  +H A K+ D++++KG + +  +Y VL+ G CK    + A
Sbjct: 568 GYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 627

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
                ++  KGF P++ ++  ++ SL +  R  +A
Sbjct: 628 YMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 662



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 149/360 (41%), Gaps = 58/360 (16%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA + +   + KG+ PDV     L+   CK  K+  A++++E M   GI PD  +Y  
Sbjct: 414 ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 473

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LCK G V    +  ++M   G   N +TYN L+   C    + ++ + + ++ Q+G
Sbjct: 474 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 533

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+A                                   VS+N L+ G C+ G  E A 
Sbjct: 534 LHPDA-----------------------------------VSFNTLIYGFCRNGDLEGAY 558

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+ L  KG+     ++N L+ +   +     A ++  EM          TY +LI   
Sbjct: 559 LLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGS 618

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
                 D A   L EM+K  F PS +++  +I  L    +V   V  +  M         
Sbjct: 619 CKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK------- 671

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK-TYQAFQLLYE 437
                      +G V E    I +   K+ ++P    K ++  L +KG  +Y  +++L+E
Sbjct: 672 -----------IGVVPEVVDTILNADKKEIAAP----KILVEDLMKKGHISYPTYEVLHE 716



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 102/197 (51%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+N+     + M+ KG  P+ +    L+ + C++NKM++A KV+  M   G+ PDA S+ 
Sbjct: 483 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 542

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+ G++  A  L +K+E+ GY     T+N+L+       N++ + +  D ++ K
Sbjct: 543 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 602

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +++TY  L++ + K   V  A   L ++I KG  P++ ++  ++  L    R  +A
Sbjct: 603 GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 662

Query: 258 IRFFRDLPSKGFEPNVV 274
           +     +   G  P VV
Sbjct: 663 VGIIHIMVKIGVVPEVV 679


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 213/432 (49%), Gaps = 1/432 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDVV    ++    +A   + A+ +++ MVS G+ P   +Y  ++  LC+ G    A ++
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 248

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            ++M+D+G   +  ++  L+ G C +G + ++L+    +  +G+ P+  ++S L+    +
Sbjct: 249 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 308

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  AM  L ++   G  P+ V Y +++ G C+ G   +A+R   ++   G  P+VV+
Sbjct: 309 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 368

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN LL  LC E R  +A  LL EM      P + T+  LI      GK D AL++ D M+
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
             R RP   +YN +I  +C +G +D      D M  R   PN  TY+ L    C  G+V+
Sbjct: 429 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 488

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +AF  +  + NK        Y  +I   CR G   +  + L +M     +PD  TY++LI
Sbjct: 489 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 548

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G   E  + +A ++  +ME+   +PDV  +N L+ G         +  +F+ M  KG  
Sbjct: 549 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 608

Query: 515 PNETTYTILVEG 526
           P+  TY  ++ G
Sbjct: 609 PDRYTYMSMING 620



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 225/448 (50%), Gaps = 1/448 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D R R      A   ++ MVSKG KP +V   ++L  LC++    KA +V + M   G+ 
Sbjct: 199 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 258

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  S+T L+   C+ G +  A+++ ++M   G   + V+++ L+      G ++ ++ +
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   GLVP+   Y+ ++    +   +  A+++ D+++  G  P++V+YN LL GLCK
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           E R  +A     ++  +G  P++ ++  L+   C+EG+ ++A +L   M      P IVT
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  +   G  D A  + D+M      P+  +Y+ +I   C +G+V+     LD+M 
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           ++   PN  TYN +    C  G V +    +Q +   + S     Y  +I    ++ K +
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 558

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF+LL  M K    PD  TY+ LI G  + G ++EA  IF  M     +PD   + +++
Sbjct: 559 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 618

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
            G   +  +  + ++   M+++G  P++
Sbjct: 619 NGHVTAGNSKEAFQLHDEMLQRGFAPDD 646



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 184/378 (48%), Gaps = 34/378 (8%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            NT T N +V   C     ++    +  + ++ + P+  T++ +++A ++     AAM L
Sbjct: 154 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           +D +++KG KP +V+YN +L GLC+ G  ++A   F+++   G  P+V S+ IL+   C 
Sbjct: 214 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            G  EEA ++  EM      P +V+++ LIG  A  GK DHA+  L EM      P    
Sbjct: 274 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 333

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN 405
           Y  +I   C  G +   ++  D+M    C P+  TYN L                     
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL--------------------- 372

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                        +  LC++ +   A  LL EM + G  PD  T+++LI G C+EG +++
Sbjct: 373 -------------LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 419

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           AL++F  M     +PD+  +N L+ G+C+    D + +++  M  +   PN  TY+IL++
Sbjct: 420 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 479

Query: 526 GIAHQDELELSAEVLKEL 543
               + ++E +   L E+
Sbjct: 480 SHCEKGQVEDAFGFLDEM 497



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 79/145 (54%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  ++ +  R G    A  L+  M   G  P   TY+S+++GLC  G+ ++A E+F  M+
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           ++   PDV +F  L+ G C+    + +L++++ M  +G  P+  +++ L+   A + +++
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313

Query: 535 LSAEVLKELQLRQVVSESAVERLVM 559
            +   L+E++   +V +  +  +V+
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVI 338


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 229/456 (50%), Gaps = 2/456 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+S G   +VV AT L+   CK   +  A+++ + M  +GI P+  +Y  ++   CK GN
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A ++  +M++          NSL+RG     +  ++ +  D  +  G + N FTY+ 
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG-IANVFTYNS 438

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL    KE  +  A  + + ++ KG +P++VSYN ++ G C++G  + A   F ++  KG
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +PN+++Y++L+     +G  E A  L   M G + +P+  T NI+I  L   G+T  + 
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQ 558

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
             L ++V+  F P+  +YN II     EG V+  +    +M      PN  TY  L    
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGF 618

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C    +  A  ++  + NK        Y  +I   CRKG    A QLL E+ + G +P+ 
Sbjct: 619 CKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNK 678

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             YSS+I G      +E AL +   M       D+  +  L+ GL K  +   + E++  
Sbjct: 679 VVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAE 738

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M+ KG MP+  TY++L+ G+ ++ +LE + ++L+++
Sbjct: 739 MLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM 774



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 222/455 (48%), Gaps = 6/455 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  ++ A+    +M +K   P V    +L+    KA   ++A K+ +  V+ GI  +  
Sbjct: 376 KNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVF 434

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK+G +  A  + EKM   G   + V+YN+++ G C  G+++ +      +
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KGL PN  TYS L++  +K+     A  L D +  +   P+  + N+++ GLCK GRT
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT 554

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            E+    + L  +GF P  ++YN ++     EG    A  +  EM     SP + TY  L
Sbjct: 555 SESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNL 614

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I         D ALKV+DEM           Y  +I   C +G +    + L ++     
Sbjct: 615 INGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGL 674

Query: 375 KPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            PN+  Y+  +M+ G  K+Q    A  + + + N+      + Y  +I+ L ++GK   A
Sbjct: 675 SPNKVVYS--SMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFA 732

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L  EM   G  PD  TYS LI GLC +G +E A +I   M+     P V  +N L+ G
Sbjct: 733 SELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITG 792

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             K      +  +   M++KG +P++TTY ILV G
Sbjct: 793 HFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 224/468 (47%), Gaps = 4/468 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M  KG  P  V  T ++    K  KM +A+KV   M+S G   +    T L+   CK
Sbjct: 282 LREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCK 341

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G++  A++L +KM + G   N VTY  ++   C  GN++++ +  +++  K + P  F 
Sbjct: 342 QGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFN 401

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            + L+    K R    A KL D+ +A  G  N+ +YN LL+ LCKEG+  EA   +  + 
Sbjct: 402 VNSLIRGYLKARSPEEASKLFDEAVA-CGIANVFTYNSLLSWLCKEGKMSEACSIWEKMV 460

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+VVSYN ++   C +G  + AN +  EM      P ++TY++L+      G T+
Sbjct: 461 RKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTE 520

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           +A  + D M      PS  + N II  LC  G+       L ++      P   TYN + 
Sbjct: 521 YAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCII 580

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
                 G V  A A+   +  K   SP  F Y  +I   C+      A +++ EM   G 
Sbjct: 581 DGFVKEGSVNSALAVYTEMC-KIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGI 639

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D   Y +LI G C +G +  A ++   ++E    P+   +++++ G  K +  + +L 
Sbjct: 640 ELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALH 699

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           + + MI +G   +   YT L+ G+  + +L  ++E+  E+  + ++ +
Sbjct: 700 LHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 232/508 (45%), Gaps = 41/508 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++NDA      ++ K   P +      L +L K N +++A  V   M S G+  D +
Sbjct: 166 KTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCA 225

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + ++    ++G +  A     + ++ G   +   Y+ ++  +C   +   +L  L  +
Sbjct: 226 TISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREM 285

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG VP+   ++ ++    K+  +  A+K+  ++++ G   N+V    L+ G CK+G  
Sbjct: 286 RDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDL 345

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT------- 307
           + A+  F  +   G  PN V+Y +++   C  G  ++A E+  +M   D SPT       
Sbjct: 346 DSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSL 405

Query: 308 ---------------------------IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
                                      + TYN L+  L   GK   A  + ++MV+   R
Sbjct: 406 IRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVR 465

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAF 397
           PS  SYN +I   C +G +D       +M  +  KPN  TY+   ++ G    G  + AF
Sbjct: 466 PSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYS--VLMDGYFKKGDTEYAF 523

Query: 398 AIIQSLGNKQNSSPQEFY-KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            +   +   +N +P +F    +I  LC+ G+T ++   L ++ + GF P   TY+ +I G
Sbjct: 524 GLYDRM-RGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDG 582

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
              EG +  AL ++  M +    P+V  +  L+ G CKS   DL+L+V   M  KG   +
Sbjct: 583 FVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELD 642

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQ 544
            T Y  L++G   + ++  ++++L ELQ
Sbjct: 643 VTVYCALIDGFCRKGDMVNASQLLSELQ 670



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 1/388 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+++A    E+MV KG +P VV   N++   C+   M  A  V   M+  G+ P+  
Sbjct: 445 KEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLI 504

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++   KKG+  YA  L ++M       +  T N ++ GLC  G  ++S   L +L
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q+G +P   TY+ +++   KE  V++A+ +  ++   G  PN+ +Y  L+ G CK    
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNM 624

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A++   ++ +KG E +V  Y  L+   C +G    A++LL+E+     SP  V Y+ +
Sbjct: 625 DLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I         + AL +   M+          Y  +I+ L  EGK+    +   +M  +  
Sbjct: 685 ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI 744

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY+ L   LC  G+++ A  I++ +  K  +     Y  +IT   ++G   +AF+
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR 804

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           L  EM   G  PD  TY  L+ G   +G
Sbjct: 805 LHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 144/275 (52%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           +L+++V +G  P  +    ++    K   +  A+ V   M   G+ P+  +YT L+N  C
Sbjct: 560 RLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFC 619

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K  N+  A++++++M++ G   +   Y +L+ G C  G++  + Q L  L + GL PN  
Sbjct: 620 KSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKV 679

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            YS ++    K + + AA+ L   +I +G   +L  Y  L++GL KEG+   A   + ++
Sbjct: 680 VYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEM 739

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            +KG  P++++Y++L+  LC +G+ E A ++L +MD    +PT+  YN LI      G  
Sbjct: 740 LAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNL 799

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
             A ++ +EM+     P   +Y+ ++     +G +
Sbjct: 800 QEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 181/383 (47%), Gaps = 4/383 (1%)

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           +L+E      + +++  +N L+        +N ++   + LI+K +VP     +  L   
Sbjct: 140 RLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSEL 199

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K   +  A  + + + +KG K +  + +V++    +EG+ EEA  +FR+  +KG E + 
Sbjct: 200 VKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDA 259

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
            +Y+I++ ++C +     A  LL EM      P  V +  +IG     GK   A+KV  E
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGE 319

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGK 392
           M+      +      ++   C +G +D  ++  D+M      PN  TY   +   C  G 
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379

Query: 393 VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           + +A+ I   + NK + SP  F    +I    +     +A +L  E    G   + +TY+
Sbjct: 380 MDKAYEIYNQMKNK-DISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYN 437

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SL+  LC EG + EA  I+  M     +P V ++N ++LG C+    D +  VF  M+EK
Sbjct: 438 SLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEK 497

Query: 512 GQMPNETTYTILVEGIAHQDELE 534
           G  PN  TY++L++G   + + E
Sbjct: 498 GLKPNLITYSVLMDGYFKKGDTE 520



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/448 (21%), Positives = 190/448 (42%), Gaps = 37/448 (8%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D+  + YL+N   K   +  A+     + +          N  +  L     + ++    
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           +++  KG+  +  T S ++ A+ +E  +  A     +   KG + +  +Y++++  +CK+
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKK 272

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM-EGRWEEANELLAEMDGGDRSPTIVT 310
             +  A+   R++  KG+ P+ V +  ++  +CM +G+  EA ++  EM    +   +V 
Sbjct: 273 PDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMKQGKMLEAVKVKGEMLSCGKPMNVVV 331

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
              L+      G  D AL++ D+M +    P+  +Y  II   C  G +D   +  +QM 
Sbjct: 332 ATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMK 391

Query: 371 HRRCKP----------------------------------NEGTYNG-LAMLCGVGKVQE 395
           ++   P                                  N  TYN  L+ LC  GK+ E
Sbjct: 392 NKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSE 451

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A +I + +  K        Y  +I   C++G    A  +  EM + G  P+  TYS L+ 
Sbjct: 452 ACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMD 511

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G   +G  E A  ++  M   +  P     N ++ GLCK+ RT  S +  + ++++G +P
Sbjct: 512 GYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIP 571

Query: 516 NETTYTILVEGIAHQDELELSAEVLKEL 543
              TY  +++G   +  +  +  V  E+
Sbjct: 572 TCMTYNCIIDGFVKEGSVNSALAVYTEM 599



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 45/246 (18%), Positives = 88/246 (35%), Gaps = 36/246 (14%)

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAF 397
           F   +  +N ++       +++  V C + +  +   P     N  L+ L     ++EA 
Sbjct: 150 FESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREAR 209

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +   + +K           +I +  R+GK  +A     E    G   D+  YS +I  +
Sbjct: 210 DVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAV 269

Query: 458 CMEGLIEEALEIFVVMEEYDYKP-----------------------------------DV 482
           C +     AL +   M +  + P                                   +V
Sbjct: 270 CKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNV 329

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
                L+ G CK    D +LE+F  M E G  PN  TY +++E       ++ + E+  +
Sbjct: 330 VVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQ 389

Query: 543 LQLRQV 548
           ++ + +
Sbjct: 390 MKNKDI 395


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 222/449 (49%), Gaps = 5/449 (1%)

Query: 83  FLQLERMVSKGHK----PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           F +++ ++S+  K    PDVV    ++    +A   + A+ +++ MVS G+ P   +Y  
Sbjct: 111 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 170

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++  LC+ G    A ++ ++M+D+G   +  ++  L+ G C +G + ++L+    +  +G
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+  ++S L+    +   +  AM  L ++   G  P+ V Y +++ G C+ G   +A+
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R   ++   G  P+VV+YN LL  LC E R  +A  LL EM      P + T+  LI   
Sbjct: 291 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 350

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK D AL++ D M+  R RP   +YN +I  +C +G +D      D M  R   PN 
Sbjct: 351 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH 410

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ L    C  G+V++AF  +  + NK        Y  +I   CR G   +  + L +
Sbjct: 411 VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 470

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M     +PD  TY++LI G   E  + +A ++  +ME+   +PDV  +N L+ G      
Sbjct: 471 MMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGN 530

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEG 526
              +  +F+ M  KG  P+  TY  ++ G
Sbjct: 531 VQEAGWIFEKMCAKGIEPDRYTYMSMING 559



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 235/476 (49%), Gaps = 7/476 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D R R      A   ++ MVSKG KP +V   ++L  LC++    KA +V + M   G+ 
Sbjct: 138 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 197

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  S+T L+   C+ G +  A+++ ++M   G   + V+++ L+      G ++ ++ +
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   GLVP+   Y+ ++    +   +  A+++ D+++  G  P++V+YN LL GLCK
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           E R  +A     ++  +G  P++ ++  L+   C+EG+ ++A +L   M      P IVT
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  +   G  D A  + D+M      P+  +Y+ +I   C +G+V+     LD+M 
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           ++   PN  TYN +    C  G V +    +Q +   + S     Y  +I    ++ K +
Sbjct: 438 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF+LL  M K    PD  TY+ LI G  + G ++EA  IF  M     +PD   + +++
Sbjct: 498 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 557

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            G   +  +  + ++   M+++G+       T+    I +      SAE LK++ +
Sbjct: 558 NGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQN------SAESLKQMPM 607



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 184/378 (48%), Gaps = 34/378 (8%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            NT T N +V   C     ++    +  + ++ + P+  T++ +++A ++     AAM L
Sbjct: 93  VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 152

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           +D +++KG KP +V+YN +L GLC+ G  ++A   F+++   G  P+V S+ IL+   C 
Sbjct: 153 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 212

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            G  EEA ++  EM      P +V+++ LIG  A  GK DHA+  L EM      P    
Sbjct: 213 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 272

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN 405
           Y  +I   C  G +   ++  D+M    C P+  TYN L                     
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL--------------------- 311

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                        +  LC++ +   A  LL EM + G  PD  T+++LI G C+EG +++
Sbjct: 312 -------------LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 358

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           AL++F  M     +PD+  +N L+ G+C+    D + +++  M  +   PN  TY+IL++
Sbjct: 359 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 418

Query: 526 GIAHQDELELSAEVLKEL 543
               + ++E +   L E+
Sbjct: 419 SHCEKGQVEDAFGFLDEM 436



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 75/136 (55%)

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R G    A  L+  M   G  P   TY+S+++GLC  G+ ++A E+F  M+++   PDV 
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +F  L+ G C+    + +L++++ M  +G  P+  +++ L+   A + +++ +   L+E+
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261

Query: 544 QLRQVVSESAVERLVM 559
           +   +V +  +  +V+
Sbjct: 262 RCFGLVPDGVIYTMVI 277


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 232/461 (50%), Gaps = 10/461 (2%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +  F   ++M   G  PD++    L+  LC  N++ + +  M  ++  G IPD  ++T L
Sbjct: 108 SQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTL 167

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK-- 197
           +  LC +  +  A +L  +M+  G   N VTY +L++GLC LGN+N +L++   ++    
Sbjct: 168 IKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTS 227

Query: 198 ----GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
                  PN  +YS +++   K      A+ L ++++ +G +PN+V+++VL+  LCKEG+
Sbjct: 228 PYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQ 287

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +A +    +   G  PN+ +Y  L++  C+ G    A EL   M      P +++YN+
Sbjct: 288 VIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNM 347

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI       K + A+K+ +EM+     P   +   ++  L   GKVD   K L ++    
Sbjct: 348 LINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVD-DAKELFRVIKPY 406

Query: 374 CKPNEGTYNGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
             P +     + +  LC  G + EA  +   L +       E +  +I  LC+ GK   A
Sbjct: 407 AMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETA 466

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           ++L  ++ + G  PD+  YSS+I G C +G +++A  +F  MEE    PD+  ++ L+ G
Sbjct: 467 WELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRG 526

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
             +S + +  +++   MIEK   P++  Y I VE +  +DE
Sbjct: 527 FYESNKLEKVVQLLHRMIEKDVWPDDGIYAI-VEDMVCKDE 566



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 216/468 (46%), Gaps = 46/468 (9%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+  L+  L K  +      L ++M   G   + +T N L+  LC +  +N+ L  +  +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G +P+  T++ L++    E  +  A KL   +   G  PN+V+Y  L+ GLC  G  
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 255 EEAIRFFRDLPSK------GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
             A+++ +++ +          PNV+SY+I++  LC  G WEEA  L  EM      P +
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEM---------------VKG---------------- 337
           VT+++LI  L   G+   A K+L+ M               +KG                
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332

Query: 338 ----RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGK 392
                + P   SYN +I   C   KV+  +K  ++M H    P+  T    L  L   GK
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVI--TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           V +A  + + +  K  + P++     I    LC+ G  ++A +L  E+  Y    D  T+
Sbjct: 393 VDDAKELFRVI--KPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETF 450

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
             LI GLC  G +E A E+F  + E   +PD   +++++ G CK  + D +  +FQ M E
Sbjct: 451 GCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEE 510

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
            G  P+  TY+IL+ G    ++LE   ++L  +  + V  +  +  +V
Sbjct: 511 NGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIV 558



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 208/437 (47%), Gaps = 40/437 (9%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS------GI 129
           +H++ +A     RM   G  P+VV    L+  LC    +  A+K  + M++         
Sbjct: 174 EHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNC 233

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  SY+ +++ LCK GN   A+ L  +M D G   N VT++ L+  LC  G + ++ +
Sbjct: 234 RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKK 293

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L+ +IQ G+VPN FTY+ L++       +++A +L   + +KG +P+++SYN+L+ G C
Sbjct: 294 LLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYC 353

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K  + EEA++ F ++   G  P+V +  +LL++L + G+ ++A EL   +        + 
Sbjct: 354 KTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLC 413

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
              I +  L  +G    A+K+ +E+     +    ++  +I  LC  GK++   +  +++
Sbjct: 414 ICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKL 473

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +    +P+   Y+ +                                  I   C+KG+  
Sbjct: 474 YEEGIQPDAMAYSSM----------------------------------IHGFCKKGQVD 499

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A  L  +M + G +PD  TYS L+RG      +E+ +++   M E D  PD   +  + 
Sbjct: 500 KANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVE 559

Query: 490 LGLCKSRRTDLSLEVFQ 506
             +CK  +    L++ Q
Sbjct: 560 DMVCKDEKYKEWLDLLQ 576



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 176/368 (47%), Gaps = 45/368 (12%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           ++ Q+ QF D +++     + F+++ LL    K         L   +   G  P+L++ N
Sbjct: 76  SVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLN 130

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           +L+  LC   R  E +     +  +G+ P+VV++  L++ LC+E R  EA +L   M   
Sbjct: 131 ILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKL 190

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG------RFRPSAASYNPIIARLCSE 356
             +P +VTY  LI  L   G  + ALK   EM+          RP+  SY+ II  LC  
Sbjct: 191 GCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKV 250

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           G  +  +   ++M  +  +PN  T++ L                                
Sbjct: 251 GNWEEAICLFNEMVDQGVQPNVVTFSVL-------------------------------- 278

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
             I  LC++G+  +A +LL  M + G  P+ +TY+SLI+G C+ G +  A E+FV M   
Sbjct: 279 --IDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSK 336

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
            Y+PDV ++N L+ G CK+ + + ++++F  M+  G  P+  T  +L++ +    +++ +
Sbjct: 337 GYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDA 396

Query: 537 AEVLKELQ 544
            E+ + ++
Sbjct: 397 KELFRVIK 404



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 157/328 (47%), Gaps = 35/328 (10%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A      MV +G +P+VV  + L+  LCK  ++ KA K++EMM+  GI+P+  +YT L+
Sbjct: 255 EAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLI 314

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
              C  G++  A +L   M   GY  + ++YN L+ G C    + ++++  + ++  G+ 
Sbjct: 315 KGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMW 374

Query: 201 PNAFTYSFLLEAAY-----------------------------------KERGVHAAMKL 225
           P+  T   LL+A +                                   K   +  AMKL
Sbjct: 375 PDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKL 434

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            +++ +   K ++ ++  L+ GLCK G+ E A   F  L  +G +P+ ++Y+ ++   C 
Sbjct: 435 FNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCK 494

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +G+ ++AN L  +M+    SP ++TY+IL+       K +  +++L  M++    P    
Sbjct: 495 KGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGI 554

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           Y  +   +C + K    +  L + F ++
Sbjct: 555 YAIVEDMVCKDEKYKEWLDLLQRFFVQK 582


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 228/475 (48%), Gaps = 1/475 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+ +A    ERM     +P V     ++  L  +    +A KV   M   GI PD  
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+T  +   CK      A++L+  M   G   N V Y ++V G        +  +   ++
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+     T++ LL    K+  V    KLLD +I +G  PNL +YN+ + GLC+ G  
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+R    L  +G +P+V++YN L+  LC   +++EA   L +M      P   TYN L
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G    A +++ + V   F P   +Y  +I  LC EG+ +  +   ++   +  
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPN   YN L   L   G + EA  +   +  K      + +  ++  LC+ G    A  
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+  M   G+ PD +T++ LI G   +  +E ALEI  VM +    PDV  +N+LL GLC
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           K+ + +  +E ++ M+EKG  PN  T+ IL+E +    +L+ +  +L+E++ + V
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 232/459 (50%), Gaps = 4/459 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M++ G    +     LL  LCK   +K+  K+++ ++  G++P+  +Y   +  LC++G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A+++V  + + G   + +TYN+L+ GLC      ++  +L +++ +GL P+++TY+
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    K   V  A +++ D +  G  P+  +Y  L+ GLC EG T  A+  F +   K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G +PNV+ YN L++ L  +G   EA +L  EM      P + T+NIL+  L   G    A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
             ++  M+   + P   ++N +I    ++ K++  ++ LD M      P+  TYN L   
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
           LC   K ++     +++  K   +P  F +  ++ SLCR  K  +A  LL EM      P
Sbjct: 506 LCKTSKFEDVMETYKTMVEK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEE-YDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           D+ T+ +LI G C  G ++ A  +F  MEE Y        +N ++    +     ++ ++
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           FQ M+++   P+  TY ++V+G      + L  + L E+
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 234/467 (50%), Gaps = 1/467 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM  +G  PDV   T  +   CK ++   A++++  M S G   +  +Y  +V    ++ 
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
                 +L  KM   G      T+N L+R LC  G++ +  + LD++I++G++PN FTY+
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             ++   +   +  A++++  +I +G KP++++YN L+ GLCK  + +EA  +   + ++
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G EP+  +YN L+   C  G  + A  ++ +       P   TY  LI  L + G+T+ A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
           L + +E +    +P+   YN +I  L ++G +    +  ++M  +   P   T+N L   
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC +G V +A  +++ + +K        +  +I     + K   A ++L  M   G  PD
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            YTY+SL+ GLC     E+ +E +  M E    P++  FN LL  LC+ R+ D +L + +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            M  K   P+  T+  L++G     +L+ +  + ++++    VS S 
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 232/470 (49%), Gaps = 2/470 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L++++ +G  P++      +  LC+  ++  A++++  ++  G  PD  +Y  L+  LCK
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A   + KM + G   ++ TYN+L+ G C  G +  + + +   +  G VP+ FT
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L++    E   + A+ L ++ + KG KPN++ YN L+ GL  +G   EA +   ++ 
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P V ++NIL+  LC  G   +A+ L+  M      P I T+NILI   +   K +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
           +AL++LD M+     P   +YN ++  LC   K + V++    M  + C PN  T+N  L
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK-YGF 443
             LC   K+ EA  +++ + NK  +     +  +I   C+ G    A+ L  +M + Y  
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           +  + TY+ +I     +  +  A ++F  M +    PD   +  ++ G CK+   +L  +
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
               M+E G +P+ TT   ++  +  +D +  +A ++  +  + +V E+ 
Sbjct: 659 FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 236/491 (48%), Gaps = 11/491 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L+ A   +  ++ +G KPDV+   NL+Y LCK +K ++A   +  MV+ G+ PD+ +Y 
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK G V  A ++V      G+  +  TY SL+ GLC  G  N++L   +  + K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN   Y+ L++    +  +  A +L +++  KG  P + ++N+L+ GLCK G   +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + + SKG+ P++ ++NIL+     + + E A E+L  M      P + TYN L+  
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    K +  ++    MV+    P+  ++N ++  LC   K+D  +  L++M ++   P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNK-QNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
             T+  L    C  G +  A+ + + +    + SS    Y  +I +   K     A +L 
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM      PD YTY  ++ G C  G +    +  + M E  + P +     ++  LC  
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            R   +  +   M++KG +P        V  I   D+ E++A    +L L  ++ +S + 
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAA---PKLVLEDLLKKSCIT 736

Query: 556 RLVMQYDFEGI 566
               +  F+G+
Sbjct: 737 YYAYELLFDGL 747



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 44/249 (17%)

Query: 327 ALKVLDEMVKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN---EGTYN 382
           AL++ + M K   F+ + ++Y  +I +L   GK + + + L  M  R    N   EG Y 
Sbjct: 23  ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM--RENVGNHMLEGVYV 80

Query: 383 GLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTK 440
           G     G  GKVQEA  + + + +  +  P  F Y  +++ L   G   QA ++   M  
Sbjct: 81  GAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139

Query: 441 YGFTPDSYTYSSLIRGLCM-----------------------------------EGLIEE 465
            G TPD Y+++  ++  C                                    E    E
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
             E+F  M        +  FN LL  LCK        ++   +I++G +PN  TY + ++
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259

Query: 526 GIAHQDELE 534
           G+  + EL+
Sbjct: 260 GLCQRGELD 268


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 228/473 (48%), Gaps = 20/473 (4%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G   + V   N    LC   K +KA  V+  M+S G IPD+S+Y+ ++  LC    
Sbjct: 78  MLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASK 137

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A QL ++M+  G   +  TY +L+   C +G + Q+  + D + Q G  PN  TY+ 
Sbjct: 138 VEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTA 197

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR--------- 259
           L+ A  K R +  A ++ + +++ G  PN+V+Y  L+ G CK G TE+A +         
Sbjct: 198 LIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDK 257

Query: 260 --------FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
                   +FR + S+  EPNVV+Y  L+  LC   + +EA +LL  M      P  + Y
Sbjct: 258 VDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIY 317

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           + LI      GK D A +V  +M+     P+  +Y+ +I +L  + ++DL +K L +M  
Sbjct: 318 DALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLE 377

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             C PN   Y  +   LC VGK  EA+ ++  +  K        Y  +I    + G+  +
Sbjct: 378 NSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDR 437

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
             +LL  MT  G  P+  TY  LI   C  GL+++A ++   M++  +   +  +  ++ 
Sbjct: 438 CLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIE 497

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           G   S     SL +   + E G +P    Y +L++       LE++ E+ +EL
Sbjct: 498 GF--SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEEL 548



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 219/480 (45%), Gaps = 24/480 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+++G  P  +   +L++  C++     A K+++ MV  G  P    Y  L+  +C   +
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 149 ------VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
                 +G A +   +M + G   N V   +  R LC +G   ++   +  ++ KG +P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           + TYS ++        V  A +L  ++   G  P++ +Y  LL   CK G  E+A  +F 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++   G  PNVV+Y  L+ +     +   ANE+   M      P IVTY  LI      G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 323 KTDHALKVLDEM---------VKGRFR--------PSAASYNPIIARLCSEGKVDLVVKC 365
           +T+ A ++   M         V   FR        P+  +Y  ++  LC   KV      
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 366 LDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L+ M    C+PN+  Y+ L    C VGK+ EA  +   +     S     Y  +I  L +
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFK 361

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
             +   A ++L +M +    P+   Y+ ++ GLC  G  +EA  + ++MEE    P+V  
Sbjct: 362 DKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVT 421

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + A++ G  K+ R D  LE+ Q+M  KG  PN  TY +L+        L+ + ++L+E++
Sbjct: 422 YTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMK 481



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 200/413 (48%), Gaps = 21/413 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI-IPDA 133
           +  KL+ A    E M+S G  P++V  T L+   CKA + +KA ++   M +  + IPD 
Sbjct: 204 KTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDV 263

Query: 134 SSY--------------TY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
             Y              TY  LV+ LCK   V  A  L+E M   G   N + Y++L+ G
Sbjct: 264 DIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDG 323

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
            C +G L+++ +   +++  G  PN +TYS L++  +K++ +  A+K+L  ++     PN
Sbjct: 324 FCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPN 383

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           +V Y  ++ GLCK G+T+EA R    +  KG  PNVV+Y  ++      GR +   ELL 
Sbjct: 384 VVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQ 443

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
            M     +P  +TY +LI      G  D A K+L+EM +  +      Y  +I     E 
Sbjct: 444 LMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEF 503

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
              L +  L ++      P    Y  L       G+++ A  + + L +  +++ Q  Y 
Sbjct: 504 VASLGL--LAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSS-FSAAYQNTYV 560

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
            +I SL    K  +AF+L  +MT+ GF P+      LI+GL   G  EEAL++
Sbjct: 561 SLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 7/268 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L +M+     P+VV  T ++  LCK  K  +A ++M MM   G  
Sbjct: 357 DKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCY 416

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT +++   K G V   ++L++ M   G   N +TY  L+   C  G L+ + + 
Sbjct: 417 PNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKL 476

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ + Q     +   Y  ++E    E    A++ LL ++   G  P L  Y +L+    K
Sbjct: 477 LEEMKQTYWPKHIGMYRKVIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIK 534

Query: 251 EGRTEEAIRFFRDLP--SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            GR E A+    +L   S  ++   VS   L+ SL +  + ++A +L ++M      P +
Sbjct: 535 AGRLEMALELHEELSSFSAAYQNTYVS---LIESLTLACKVDKAFKLYSDMTRRGFVPEL 591

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVK 336
                LI  L   GK + AL++ D + +
Sbjct: 592 SMLVCLIKGLLRVGKWEEALQLSDSICQ 619


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 237/524 (45%), Gaps = 35/524 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           + +  D  L++A     +M+     P + +  NL   L K  +    I +   M S G++
Sbjct: 80  NCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLL 139

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  S   L+NCLC    V     +   +   GY  NT T+ +LV+GLC+ G + ++++ 
Sbjct: 140 KNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRV 199

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KPNLVSYNVL 244
              +      P+A T   L+    +      A+KL + +I          KP +VSY+ +
Sbjct: 200 FKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCI 259

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           +  LCK+G  E A  FF ++  KG  PNVV+Y  LL  LC    WEEA  L  EM     
Sbjct: 260 IDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGL 319

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P +VT+++LIG+L   GK   A  + D MV+    PS  +YN +I   C  G VD   K
Sbjct: 320 LPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKK 379

Query: 365 CLDQMFHRRCKPNEGTYNGL------------AML-----------------CGVGKVQE 395
               M ++RC+ + G+Y+ L            AM+                   VG  ++
Sbjct: 380 IFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARK 439

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
            F  IQ      +S     Y   +  LC+ G   +A  + Y +    F  +   ++SLI 
Sbjct: 440 LFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLIN 499

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G+C    +E A E+F  +     +PDV  +  ++ GLCK  +   + ++F  M EKG  P
Sbjct: 500 GMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAP 559

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           N  T+  L+ G+    E     E+L ++  R++  +++   +VM
Sbjct: 560 NVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVM 603



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 123/300 (41%), Gaps = 67/300 (22%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP----------------- 131
           MV  G  PDVV  + L+  LCK  K+K+A  + ++MV   + P                 
Sbjct: 314 MVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGM 373

Query: 132 ------------------DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY-- 171
                             DA SY+ L+   CK   V  AM L  +M D G     +TY  
Sbjct: 374 VDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSK 433

Query: 172 --------------------------NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                                     N  + GLC  G ++++L     L       N   
Sbjct: 434 VGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAI 493

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+    +   +  A +L + +  +  +P++V+Y +++ GLCK G+ ++A   F ++ 
Sbjct: 494 FNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEME 553

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT----IVTYNILIGSLAYH 321
            KG  PNVV++N L+R LC+     +  ELL +M     SP     ++  +IL+    YH
Sbjct: 554 EKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKDENYH 613



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 7/222 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +++ A +    M+ +G +P V+  + +      A K+   I+  +M++ S      S
Sbjct: 405 KDSEVHGAMILYREMMDRGIQPTVITYSKV----GDARKLFGEIQFQDMVLDS---ISYS 457

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y   ++ LCK G V  A+ +   +E+  + +N   +NSL+ G+C    L  + +  +RL
Sbjct: 458 IYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRL 517

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + L P+  TY+ ++    K      A  L  ++  KG  PN+V++N L+ GLC     
Sbjct: 518 CNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSER 577

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            + +     + ++   P+  +  I++  L  +  + E   LL
Sbjct: 578 PKIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNLL 619



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/158 (19%), Positives = 69/158 (43%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LCK   + +A+ V   + +     + + +  L+N +C+   +  A +L  ++ +     +
Sbjct: 466 LCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPD 525

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            VTY  ++ GLC +G   ++      + +KG  PN  T++ L+            ++LL 
Sbjct: 526 VVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLH 585

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            + A+   P+  +  +++  L K+    E +      P
Sbjct: 586 KMAARKLSPDASTLLIVMDILLKDENYHECLNLLPTFP 623


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 223/459 (48%), Gaps = 1/459 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ M+  G  P     ++L+  L +  K+  A  ++  +   G +P    Y  L+N LCK
Sbjct: 319 MDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCK 378

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A  L ++M + G   N VTY+ L+   C  G L+ ++ FL ++I  G+    + 
Sbjct: 379 DGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYP 438

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K   + AA+   D++I KG KP +VSY  L++G C +G+  EA R + ++ 
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT 498

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  PN  ++  L+ +L    R  +A  L  EM   +  P  VTYN++I      G T 
Sbjct: 499 GKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTV 558

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++L++MV+    P   +Y P+I+ LCS G+V    K +D +     K NE  Y+ L 
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G++++A  + + +  +        Y  +I    ++  T   F LL  M      
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLR 678

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD   Y+S+I G    G +++A  I+ +M +    P++  +  L+  LCK+   D +  +
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELL 738

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           ++ M+     PN  TY   ++ +A +  +E + ++  ++
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM 777



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 223/446 (50%), Gaps = 6/446 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           ++S G +PD+     ++   C+     KA ++++ M SS +  +   Y  L++ LCK   
Sbjct: 219 ILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKR 276

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A+++   +   G   + VTY +LV GLC +         +D +I+ G VP     S 
Sbjct: 277 VWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSS 336

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+E   ++  V  A  L++ +   G  P+L  YN L+  LCK+G+ +EA   F+++  KG
Sbjct: 337 LVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKG 396

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
              N V+Y+IL+ S C  G+ + A   L +M       T+  YN LI      G    A+
Sbjct: 397 LCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAV 456

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AML 387
              DEM+    +P+  SY  +I+  C++GK+    +   +M  +   PN  T+  L + L
Sbjct: 457 SFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISAL 516

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
               ++ +AF +   +  +QN  P E  Y  +I   C++G T +AF+LL +M + G  PD
Sbjct: 517 FRANRMTDAFRLFDEM-LEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPD 575

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           +YTY  LI  LC  G + EA +    +    +K +   ++ALL G CK  R   +L V +
Sbjct: 576 TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCR 635

Query: 507 MMIEKGQMPNETTYTILVEG-IAHQD 531
            M+++G   +   Y +L++G I  QD
Sbjct: 636 EMVKRGVDMDLVCYAVLIDGTIKEQD 661



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 214/456 (46%), Gaps = 1/456 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           ++ KG     V    L+  LCK  + +    VM+ M+  G +P  ++ + LV  L +KG 
Sbjct: 287 LIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGK 346

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A  LV +++  G   +   YN+L+  LC  G  +++      + +KGL  N  TYS 
Sbjct: 347 VVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSI 406

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+++  +   +  A+  L  +I  G K  +  YN L+ G CK G    A+ FF ++  KG
Sbjct: 407 LIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKG 466

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P VVSY  L+   C +G+  EA  L  EM G   +P   T+  LI +L    +   A 
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAF 526

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AML 387
           ++ DEM++    P+  +YN +I   C EG      + L+QM  +   P+  TY  L + L
Sbjct: 527 RLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G+V EA   I  L  +     +  Y  ++   C++G+   A  +  EM K G   D 
Sbjct: 587 CSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDL 646

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             Y+ LI G   E        +   M +   +PD   + +++ G  K+     +  ++ +
Sbjct: 647 VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI 706

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           MI++G  PN  TYT L+  +     ++ +  + KE+
Sbjct: 707 MIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEM 742



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 230/490 (46%), Gaps = 17/490 (3%)

Query: 44  VLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATN 103
           ++A  ++T+ P +S+    + K GN          L+ A    + M+ KG KP VV  T+
Sbjct: 428 IMAGIKITVYPYNSL-INGHCKLGN----------LSAAVSFFDEMIDKGLKPTVVSYTS 476

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+   C   K+ +A ++   M   GI P+  ++T L++ L +   +  A +L ++M +  
Sbjct: 477 LISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN 536

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N VTYN ++ G C  GN  ++ + L++++QKGLVP+ +TY  L+ +      V  A 
Sbjct: 537 MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAK 596

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           K +DD+  +  K N + Y+ LL G CKEGR  +A+   R++  +G + ++V Y +L+   
Sbjct: 597 KFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGT 656

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             E        LL  M      P  V Y  +I   +  G    A  + D M+     P+ 
Sbjct: 657 IKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNI 716

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQS 402
            +Y  +I  LC  G +D       +M      PN  TY   L  L   G +++A  +   
Sbjct: 717 VTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHND 776

Query: 403 L--GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           +  G   N+     Y  ++   C+ G+  +A +LL EM      PD  TYS++I   C  
Sbjct: 777 MLKGLLANTVS---YNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRR 833

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G ++ A+E +  M     KPD   +N L+ G C +     + E+   MI +G  PN+ T+
Sbjct: 834 GNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATH 893

Query: 521 TILVEGIAHQ 530
             L  G + +
Sbjct: 894 KSLSHGASRK 903



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 222/488 (45%), Gaps = 4/488 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  R  KL+ A   L +M+  G K  V    +L+   CK   +  A+   + M+  G+ 
Sbjct: 409 DSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLK 468

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   SYT L++  C KG +  A +L  +M   G   NT T+ +L+  L     +  + + 
Sbjct: 469 PTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRL 528

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++++ ++PN  TY+ ++E   KE     A +LL+ ++ KG  P+  +Y  L++ LC 
Sbjct: 529 FDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCS 588

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA +F  DL  + F+ N + Y+ LL   C EGR  +A  +  EM        +V 
Sbjct: 589 TGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVC 648

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y +LI        T     +L  M   R RP    Y  +I      G V       D M 
Sbjct: 649 YAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMI 708

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKT 428
              C PN  TY  L   LC  G + +A  + + +    NS+P    Y   +  L R+G  
Sbjct: 709 DEGCTPNIVTYTTLINELCKAGLMDKAELLWKEM-LVSNSTPNHVTYCCFLDHLAREGSM 767

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A QL  +M K G   ++ +Y+ L+RG C  G +EEA ++   M +    PD   ++ +
Sbjct: 768 EKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTI 826

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +   C+    D ++E +  M+ KG  P+   Y  L+ G     EL  + E+  ++  R V
Sbjct: 827 IYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGV 886

Query: 549 VSESAVER 556
               A  +
Sbjct: 887 KPNQATHK 894



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 229/472 (48%), Gaps = 6/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+ DAF  + R+   G  P +     L+  LCK  K  +A  + + M   G+  +  
Sbjct: 343 RKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDV 402

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++  C++G +  A+  + KM   G       YNSL+ G C LGNL+ ++ F D +
Sbjct: 403 TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM 462

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I KGL P   +Y+ L+     +  +H A +L  ++  KG  PN  ++  L++ L +  R 
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRM 522

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A R F ++  +   PN V+YN+++   C EG   +A ELL +M      P   TY  L
Sbjct: 523 TDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPL 582

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL   G+   A K +D++ +  F+ +   Y+ ++   C EG++   +    +M  R  
Sbjct: 583 ISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642

Query: 375 KPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
             +   Y    ++ G  K Q+    F +++++ +++    +  Y  +I    + G   +A
Sbjct: 643 DMDLVCYA--VLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKA 700

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F +   M   G TP+  TY++LI  LC  GL+++A  ++  M   +  P+   +   L  
Sbjct: 701 FGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDH 760

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L +    + ++++   M+ KG + N  +Y ILV G      +E + ++L E+
Sbjct: 761 LAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEM 811



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 147/310 (47%), Gaps = 5/310 (1%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P + +   +L GL K  R +  +  F ++ S G  P++  Y  ++RS C    + +A E+
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           +  M+  D +  +V YN+LI  L  + +   A+++ + +++     S  +Y  ++  LC 
Sbjct: 251 IQRMESSDLN--VVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
             + ++    +D+M      P E   + L   L   GKV +AF ++  +  K  + P  F
Sbjct: 309 VQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRV-KKVGAMPSLF 367

Query: 415 -YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I SLC+ GK  +A  L  EM + G   +  TYS LI   C  G ++ A+     M
Sbjct: 368 VYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM 427

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
                K  V  +N+L+ G CK      ++  F  MI+KG  P   +YT L+ G  ++ +L
Sbjct: 428 IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKL 487

Query: 534 ELSAEVLKEL 543
             +  +  E+
Sbjct: 488 HEAFRLYHEM 497


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 244/535 (45%), Gaps = 71/535 (13%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R++S+G  PDV   TN++  LCK  KM+ AI++   M   GI P+  +Y  ++N LC+ G
Sbjct: 210 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 269

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A +L EKM   G   N  TY +L+ GL  L   ++    LD +I  G  PN   ++
Sbjct: 270 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFN 329

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG-------------------- 247
            L++   K   +  A+K+ D +I+K   P  V+   L+ G                    
Sbjct: 330 NLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSS 389

Query: 248 ---------------LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
                          LCK+ R   A RF + + S+ F P+ +   +L+  LC +G+  EA
Sbjct: 390 GLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEA 449

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            EL   +       + VT N LI  L   GK   A +++ EM++        +YN +I  
Sbjct: 450 TELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILG 509

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI------------ 399
            C+EGKV+   +  ++M  R  +P+  TYN L   LC VGK+ +A  +            
Sbjct: 510 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 569

Query: 400 -------------------IQSLGNKQNSSPQEF----YKYVITSLCRKGKTYQAFQLLY 436
                              +++L N+  S   E     Y  +I + C+ G    A QLL 
Sbjct: 570 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 629

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  P+  TYSSLI G+C  GL+E+A  +   M +  + P+V  + AL+ G CK  
Sbjct: 630 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLG 689

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           + D +   +  MI     PN+ TYT++++G      +E +  +L +++   +V +
Sbjct: 690 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 744



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 213/440 (48%), Gaps = 3/440 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SK   P  V   +L+   CK+++++ A   +E ++SSG+     +   +V+ LCKK  
Sbjct: 351 MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFR 410

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A +  + M    +  + +    LV GLC  G   ++ +   RL++KG   +  T + 
Sbjct: 411 YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNA 470

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+        +  A +++ +++ +G   + ++YN L+ G C EG+ E   R   ++  +G
Sbjct: 471 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 530

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P++ +YN LLR LC  G+ ++A +L  E         I TY I++       + +   
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 590

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
            + +E++  +   ++  YN II   C  G V   ++ L+ M  +   PN  TY+ L   +
Sbjct: 591 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 650

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           C +G V++A  +I  +  K+   P    Y  +I   C+ G+   A     EM  +   P+
Sbjct: 651 CNIGLVEDAKHLIDEM-RKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPN 709

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            +TY+ +I G C  G +E+A  + + M+E    PDV  +N L  G CK+   D + +V  
Sbjct: 710 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 769

Query: 507 MMIEKGQMPNETTYTILVEG 526
            M  +G   +E TYT LV G
Sbjct: 770 QMATEGLPVDEITYTTLVHG 789



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 181/383 (47%), Gaps = 1/383 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  + + AF   + M+S+  +P  +  T L+  LCK  K  +A ++   ++  G      
Sbjct: 407 KKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKV 466

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L++ LC  G +  A ++V++M + G P + +TYN+L+ G C  G +    +  + +
Sbjct: 467 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 526

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P+ +TY+FLL        +  A+KL D+  A G   N+ +Y +++ G CK  R 
Sbjct: 527 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 586

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+    F +L SK  E N + YNI++++ C  G    A +LL  M      P   TY+ L
Sbjct: 587 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +   G  + A  ++DEM K  F P+   Y  +I   C  G++D       +M     
Sbjct: 647 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 706

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN+ TY  +    C +G +++A  ++  +           Y  +    C+      AF+
Sbjct: 707 HPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK 766

Query: 434 LLYEMTKYGFTPDSYTYSSLIRG 456
           +  +M   G   D  TY++L+ G
Sbjct: 767 VCDQMATEGLPVDEITYTTLVHG 789



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 202/445 (45%), Gaps = 2/445 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A+ V  ++   G  P   +  + ++ L K        ++   M +   P +  ++ +++ 
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVIN 228

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            LC  G +  +++   ++ + G+ PN  TY+ ++    +   +  A +L + +  KG +P
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           NL +Y  L+ GL K    ++      ++   GF PNVV +N L+   C  G  E A ++ 
Sbjct: 289 NLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIK 348

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
             M   + +PT VT   L+       + +HA   L+E++         +   ++  LC +
Sbjct: 349 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 408

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            +     +    M  R  +P++     L   LC  GK  EA  +   L  K + + +   
Sbjct: 409 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 468

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I  LC  GK  +A +++ EM + G   D  TY++LI G C EG +E    +   M +
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 528

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              +PD+  +N LL GLC   + D +++++      G + N  TY I++EG    + +E 
Sbjct: 529 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 588

Query: 536 SAEVLKELQLRQVVSESAVERLVMQ 560
              +  EL  +++   S V  ++++
Sbjct: 589 VENLFNELLSKKMELNSIVYNIIIK 613


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 224/460 (48%), Gaps = 37/460 (8%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDASSYTYLVNCLCKKGNVGYAMQ 154
           PD V    L+   CKA ++ +A  + E M   G   P+  +Y+ L++C CK G VG  + 
Sbjct: 147 PDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLG 206

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L+E+ME  G   +   Y+SL+   C  G++    +  D ++++ + PN  TYS L++   
Sbjct: 207 LLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLG 266

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           +      A ++L D+ A+G +P++V+Y VL  GLCK GR  +AI+    +  KG EP  +
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YN+++  LC E R ++A  ++  M    + P  VTYN L+  L   GK   A+ +   +
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386

Query: 335 VKGRF--RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
           +  +F  +P   + N +I  LC EG+V    +    M     + N  TYN          
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYN---------- 436

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
               F I   L  ++     + +KY + S                    GF+P+S TYS 
Sbjct: 437 ----FLIEGYLAARKLIEALKLWKYAVES--------------------GFSPNSMTYSV 472

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +I GLC   ++  A  +F  M++   +P V ++NAL+  LC+    + +  +FQ M    
Sbjct: 473 MINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVN 532

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
              +  ++ I+++G     +++ + E+L E+ +  +V ++
Sbjct: 533 HNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDA 572



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 245/511 (47%), Gaps = 17/511 (3%)

Query: 62  PNRKPGNNNDTRH-RDHKLNDAFLQLERMVSKG--HKPDVVQATNLLYDLCKANKMKKAI 118
           P R   N++   H + H L+DA     R +       P     + L+ +L KA +    +
Sbjct: 3   PKRLLNNSSSIAHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVV 62

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
            V   MVS+ ++P  +S + L        +  +A  ++  M   G+  N    N +++G 
Sbjct: 63  SVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGF 122

Query: 179 CMLGNLNQSLQFLDRLIQK--GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-- 234
           C  G  ++++    ++ +    +VP+  TY+ L+    K + + A  ++L + + KGG  
Sbjct: 123 CRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRL-AEARVLFEAMKKGGDC 181

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +PNLV+Y+VL+   CK G   E +    ++  +G + +V  Y+ L+ + C EG  E   E
Sbjct: 182 RPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRE 241

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L  EM     SP +VTY+ L+  L   G+   A ++L +M     RP   +Y  +   LC
Sbjct: 242 LFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLC 301

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE 413
             G+    +K LD M  +  +P   TYN +   LC   ++ +AF +++ +  K       
Sbjct: 302 KNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAV 361

Query: 414 FYKYVITSLCRKGKTYQAFQL--LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
            Y  ++  LC  GK ++A  L  L    K+   PD +T ++LI+GLC EG + +A  I  
Sbjct: 362 TYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHS 421

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M E   + ++  +N L+ G   +R+   +L++++  +E G  PN  TY++++ G+    
Sbjct: 422 SMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQ 481

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVMQYD 562
            L ++  +  +++      +S +   V+ Y+
Sbjct: 482 MLSVARGLFCKMK------DSGIRPTVIDYN 506



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 214/447 (47%), Gaps = 3/447 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M  +G K DV   ++L+   C    ++   ++ + M+   + P+  +Y+ L+  L +
Sbjct: 208 LEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGR 267

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A ++++ M   G   + V Y  L  GLC  G    +++ LD ++QKG  P   T
Sbjct: 268 TGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLT 327

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++    KE  +  A  +++ ++ KG KP+ V+YN LL GLC  G+  EA+  ++ L 
Sbjct: 328 YNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLL 387

Query: 266 SKGF--EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           S+ F  +P+V + N L++ LC EGR  +A  + + M        IVTYN LI       K
Sbjct: 388 SEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARK 447

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              ALK+    V+  F P++ +Y+ +I  LC    + +      +M     +P    YN 
Sbjct: 448 LIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNA 507

Query: 384 L-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L   LC    +++A ++ Q + N  ++     +  +I    + G    A +LL EM    
Sbjct: 508 LMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD 567

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD+ T+S LI      G+++EA+ ++  M    + P V  F++LL G      T+  +
Sbjct: 568 LVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKII 627

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAH 529
            +   M +K  + +    + ++  + H
Sbjct: 628 SLLHQMADKDVVLDSKLTSTILACLCH 654



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 186/387 (48%), Gaps = 3/387 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  +A   L+ M ++G +PDVV  T L   LCK  +   AIKV+++MV  G  P   
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +VN LCK+  +  A  +VE M   G   + VTYN+L++GLC  G +++++     L
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386

Query: 195 IQKG--LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           + +   + P+ FT + L++   KE  VH A ++   ++  G + N+V+YN L+ G     
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR 446

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           +  EA++ ++     GF PN ++Y++++  LC       A  L  +M      PT++ YN
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYN 506

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+ SL      + A  +  EM          S+N II      G V    + L +MF  
Sbjct: 507 ALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMM 566

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+  T++ L      +G + EA  + + + +  +      +  ++     KG+T + 
Sbjct: 567 DLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKI 626

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLC 458
             LL++M       DS   S+++  LC
Sbjct: 627 ISLLHQMADKDVVLDSKLTSTILACLC 653


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 244/535 (45%), Gaps = 71/535 (13%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R++S+G  PDV   TN++  LCK  KM+ AI++   M   GI P+  +Y  ++N LC+ G
Sbjct: 233 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 292

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A +L EKM   G   N  TY +L+ GL  L   ++    LD +I  G  PN   ++
Sbjct: 293 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFN 352

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG-------------------- 247
            L++   K   +  A+K+ D +I+K   P  V+   L+ G                    
Sbjct: 353 NLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSS 412

Query: 248 ---------------LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
                          LCK+ R   A RF + + S+ F P+ +   +L+  LC +G+  EA
Sbjct: 413 GLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEA 472

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            EL   +       + VT N LI  L   GK   A +++ EM++        +YN +I  
Sbjct: 473 TELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILG 532

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI------------ 399
            C+EGKV+   +  ++M  R  +P+  TYN L   LC VGK+ +A  +            
Sbjct: 533 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 592

Query: 400 -------------------IQSLGNKQNSSPQEF----YKYVITSLCRKGKTYQAFQLLY 436
                              +++L N+  S   E     Y  +I + C+ G    A QLL 
Sbjct: 593 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 652

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  P+  TYSSLI G+C  GL+E+A  +   M +  + P+V  + AL+ G CK  
Sbjct: 653 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLG 712

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           + D +   +  MI     PN+ TYT++++G      +E +  +L +++   +V +
Sbjct: 713 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 767



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 213/440 (48%), Gaps = 3/440 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SK   P  V   +L+   CK+++++ A   +E ++SSG+     +   +V+ LCKK  
Sbjct: 374 MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFR 433

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A +  + M    +  + +    LV GLC  G   ++ +   RL++KG   +  T + 
Sbjct: 434 YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNA 493

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+        +  A +++ +++ +G   + ++YN L+ G C EG+ E   R   ++  +G
Sbjct: 494 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 553

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P++ +YN LLR LC  G+ ++A +L  E         I TY I++       + +   
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 613

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
            + +E++  +   ++  YN II   C  G V   ++ L+ M  +   PN  TY+ L   +
Sbjct: 614 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 673

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           C +G V++A  +I  +  K+   P    Y  +I   C+ G+   A     EM  +   P+
Sbjct: 674 CNIGLVEDAKHLIDEM-RKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPN 732

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            +TY+ +I G C  G +E+A  + + M+E    PDV  +N L  G CK+   D + +V  
Sbjct: 733 KFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCD 792

Query: 507 MMIEKGQMPNETTYTILVEG 526
            M  +G   +E TYT LV G
Sbjct: 793 QMATEGLPVDEITYTTLVHG 812



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 181/383 (47%), Gaps = 1/383 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  + + AF   + M+S+  +P  +  T L+  LCK  K  +A ++   ++  G      
Sbjct: 430 KKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKV 489

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L++ LC  G +  A ++V++M + G P + +TYN+L+ G C  G +    +  + +
Sbjct: 490 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 549

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P+ +TY+FLL        +  A+KL D+  A G   N+ +Y +++ G CK  R 
Sbjct: 550 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+    F +L SK  E N + YNI++++ C  G    A +LL  M      P   TY+ L
Sbjct: 610 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 669

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +   G  + A  ++DEM K  F P+   Y  +I   C  G++D       +M     
Sbjct: 670 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 729

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN+ TY  +    C +G +++A  ++  +           Y  +    C+      AF+
Sbjct: 730 HPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK 789

Query: 434 LLYEMTKYGFTPDSYTYSSLIRG 456
           +  +M   G   D  TY++L+ G
Sbjct: 790 VCDQMATEGLPVDEITYTTLVHG 812



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 203/445 (45%), Gaps = 2/445 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A+ V  ++   G  P   +  +L++ L K        ++   M +   P +  ++ +++ 
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVIN 251

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            LC  G +  +++   ++ + G+ PN  TY+ ++    +   +  A +L + +  KG +P
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           NL +Y  L+ GL K    ++      ++   GF PNVV +N L+   C  G  E A ++ 
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 371

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
             M   + +PT VT   L+       + +HA   L+E++         +   ++  LC +
Sbjct: 372 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 431

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            +     +    M  R  +P++     L   LC  GK  EA  +   L  K + + +   
Sbjct: 432 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 491

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I  LC  GK  +A +++ EM + G   D  TY++LI G C EG +E    +   M +
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              +PD+  +N LL GLC   + D +++++      G + N  TY I++EG    + +E 
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 611

Query: 536 SAEVLKELQLRQVVSESAVERLVMQ 560
              +  EL  +++   S V  ++++
Sbjct: 612 VENLFNELLSKKMELNSIVYNIIIK 636


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 237/506 (46%), Gaps = 38/506 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNL-LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           L +A   L RM   G  P    + N+ +  + +A +   A++V + M    ++P+  +Y 
Sbjct: 180 LGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYN 239

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++   K G++    +L ++M  +G   N +TYN L+ GLC  G + ++   LD +  +
Sbjct: 240 TMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 299

Query: 198 GLVPNAFTYSFL-----------------------------------LEAAYKERGVHAA 222
            +VP+ FTYS L                                   L    K+  V  A
Sbjct: 300 KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIA 359

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            ++L  ++  G  P  V YN L+ G C+ G  E A   F  + S+  +P+ ++YN L+  
Sbjct: 360 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 419

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC   R   A +LL EM     +PT+ T+N LI +    G+ +    VL EM +   +P+
Sbjct: 420 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 479

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
             SY  I+   C  GK+   V  LD MFH+   PN   YN +       G   +AF +++
Sbjct: 480 VVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVE 539

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            + +   S     Y  +I  LC + +  +A +++  ++ +   PD+ +Y++LI   C  G
Sbjct: 540 KMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRG 599

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I++AL++   M +Y  K  V  ++ L+ GL  + R +    ++Q M++   +P+   + 
Sbjct: 600 NIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHN 659

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQ 547
           I+VE  +     E+ AE L++  L++
Sbjct: 660 IMVEAYSKYGN-EIKAEDLRKEMLQK 684



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 208/436 (47%), Gaps = 2/436 (0%)

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRG 177
           +   ++ S+G  PD  ++   V      G++G A+ ++ +M  D   P N  +YN ++ G
Sbjct: 150 RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAG 209

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           +   G    +++  D + ++ ++PN  TY+ +++   K   + A  +L D ++  G KPN
Sbjct: 210 MWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPN 269

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
            ++YNVLL+GLC+ GR  E      ++ S+   P+  +Y+IL   L   G  +    L  
Sbjct: 270 AITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFG 329

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +      +    T +IL+  L   GK   A +VL  +V     P+   YN +I   C  G
Sbjct: 330 KYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 389

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           +++       QM  R  KP+  TYN L   LC   ++  A  ++  + +   +   E + 
Sbjct: 390 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 449

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I +  R G+  + F +L EM + G  P+  +Y S++   C  G I EA+ I   M   
Sbjct: 450 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 509

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           D  P+   +NA++    +    D +  + + M   G  P+  TY +L++G+ +Q ++  +
Sbjct: 510 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 569

Query: 537 AEVLKELQLRQVVSES 552
            E++  L   +++ ++
Sbjct: 570 EEIINSLSNHRLIPDA 585



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 187/411 (45%), Gaps = 1/411 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L   F   ++MV  G KP+ +    LL  LC+A +M +   +++ M S  ++
Sbjct: 243 DGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV 302

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L + L + G+    + L  K    G      T + L+ GLC  G ++ + + 
Sbjct: 303 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 362

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  L+  GLVP    Y+ L+    +   +  A      + ++  KP+ ++YN L+ GLCK
Sbjct: 363 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 422

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R   A     ++   G  P V ++N L+ +    G+ E+   +L+EM      P +V+
Sbjct: 423 AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 482

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  ++ +   +GK   A+ +LD+M      P+A  YN II      G  D     +++M 
Sbjct: 483 YGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 542

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                P+  TYN L   LC   ++ EA  II SL N +       Y  +I++ C +G   
Sbjct: 543 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 602

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +A  L   M KYG      TY  LI GL   G + E   ++  M + +  P
Sbjct: 603 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 653



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 146/308 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K++ A   L+ +V+ G  P  V    L+   C+  +++ A      M S  I PD  
Sbjct: 352 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 411

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK   +  A  L+ +M+D G      T+N+L+      G L +    L  +
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL PN  +Y  ++ A  K   +  A+ +LDD+  K   PN   YN ++    + G  
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 531

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      + S G  P++V+YN+L++ LC + +  EA E++  +      P  V+YN L
Sbjct: 532 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 591

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +  Y G  D AL +   M K   + +  +Y+ +I+ L   G+++ +     +M     
Sbjct: 592 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 651

Query: 375 KPNEGTYN 382
            P+   +N
Sbjct: 652 VPSNAIHN 659



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 160/363 (44%), Gaps = 39/363 (10%)

Query: 221 AAMKLLDDII--AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
            A++LL D+   A+   P+L S N+LL  L   GR  +  R F  L S G  P+  ++N 
Sbjct: 110 GALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNK 169

Query: 279 LLRSLCMEGRWEEANELLAEMD-GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            +++    G   EA  +L  M   G   P   +YN++I  +   G+   A++V DEM + 
Sbjct: 170 AVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTER 229

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEA 396
              P+  +YN +I      G ++   +  DQM     KPN  TYN  L+ LC  G++ E 
Sbjct: 230 AVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGET 289

Query: 397 FAIIQSL-----------------GNKQNSSPQE----FYKY--------------VITS 421
            A++  +                 G  +N   +     F KY              ++  
Sbjct: 290 SALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNG 349

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC+ GK   A ++L  +   G  P    Y++LI G C  G +E A   F  M+    KPD
Sbjct: 350 LCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPD 409

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              +NAL+ GLCK+ R   + ++   M + G  P   T+  L++      +LE    VL 
Sbjct: 410 HITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLS 469

Query: 542 ELQ 544
           E+Q
Sbjct: 470 EMQ 472



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 114/229 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L   F+ L  M   G KP+VV   +++   CK  K+ +A+ +++ M    ++
Sbjct: 453 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 512

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A  Y  +++   + G    A  LVEKM+  G   + VTYN L++GLC    ++++ + 
Sbjct: 513 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 572

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++ L    L+P+A +Y+ L+ A      +  A+ L   +   G K  + +Y+ L++GL  
Sbjct: 573 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 632

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            GR  E    ++ +      P+   +NI++ +    G   +A +L  EM
Sbjct: 633 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 238/489 (48%), Gaps = 7/489 (1%)

Query: 59  YTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI 118
           Y+  N    N    +H DH ++       +M S    P     + L+       K   A 
Sbjct: 59  YSSCNTLIDNLRKAKHYDHVISVH----SKMASVSVFPCFTSLSALIESFVNTQKPSFAF 114

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
            V+ +++  G   +  ++  L+   C+ G+   AM L   M+      + V+YN+++ GL
Sbjct: 115 GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C    L ++ +    +      PN+ T+S L++   K   V     LL+++   G + ++
Sbjct: 175 CKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDV 234

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
             Y+ L++G C +G  E     F ++  K   PNVV+Y+ L+ +LC + +W+EA ++L  
Sbjct: 235 FVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDT 294

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M G    P +V Y +L   L+ +G+   A+KVLD MVK    P+  +YN II  LC EG+
Sbjct: 295 MTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ-NSSPQEF-Y 415
           VD  +  L+ M  +  KP+  TY+ L   LCGVGK+ EA  ++  L +K+ +  P  F +
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAF 414

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             VI  LC++ +   A ++ Y M + GF  +  TY+ LI G    G + +ALE++    +
Sbjct: 415 NLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVD 474

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P+   +  L+ GLCK +   ++  +F      G  P  + Y  L+  +  +  +E 
Sbjct: 475 SGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQ 534

Query: 536 SAEVLKELQ 544
           +  + +E++
Sbjct: 535 ARNLFQEMR 543



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 248/524 (47%), Gaps = 47/524 (8%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           HK  D F  ++R       PD V    ++  LCK  ++ +A ++ + M      P++ ++
Sbjct: 146 HKAMDLFCMMKR---NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTF 202

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           + L++  CK G+V     L+E+ME  G   +   Y++L+ G C  G++ +  +  + +++
Sbjct: 203 SALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLR 262

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           K + PN  TYS L+ A  K++    A ++LD +     +P++V+Y VL  GL K GR  +
Sbjct: 263 KNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASD 322

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           AI+    +  +G EPN V+YN ++  LC EGR ++A  +L  M    + P +VTY+ L+ 
Sbjct: 323 AIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVK 382

Query: 317 SLAYHGKTDHALKVLDEMVKGRF--RPSAASYNPIIARLC-------------------- 354
            L   GK D A+ +L+ ++   F  +P   ++N +I  LC                    
Sbjct: 383 GLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGF 442

Query: 355 ---------------SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAI 399
                          S GK+   ++           PN  TY    ++ G+ K+Q   +I
Sbjct: 443 PSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYT--VLINGLCKMQ-MLSI 499

Query: 400 IQSLGNKQNSSPQE----FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
            + L NK+ +S        Y  ++ SLCR+    QA  L  EM      PD  +++ +I 
Sbjct: 500 AKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIID 559

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G    G +E A E+ + M   +  PD   F+ L+    K  + D +  +++ M+  G +P
Sbjct: 560 GTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVP 619

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           +   +  L++G + + + E    +L+++  + VV +S +   ++
Sbjct: 620 DAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTIL 663



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 222/456 (48%), Gaps = 3/456 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L  ++ +G   +V     LL   C++    KA+ +  MM  + +IPD  SY  ++N
Sbjct: 113 AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN 172

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK   +  A +L ++M+      N+VT+++L+ G C  G++ +    L+ + + GL  
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           + F YS L+     +  +    +L ++++ K   PN+V+Y+ L+  LCK+ + +EA +  
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +      P+VV+Y +L   L   GR  +A ++L  M      P  VTYN +I  L   
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE 352

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR--RCKPNEG 379
           G+ D AL +L+ M K   +P   +Y+ ++  LC  GK+D  V  L+ +  +    KP+  
Sbjct: 353 GRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            +N +   LC   +++ A  +  ++  +   S    Y  +I      GK  +A +L  + 
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G +P++ TY+ LI GLC   ++  A  +F        +P V  +N L+  LC+    
Sbjct: 473 VDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSV 532

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           + +  +FQ M      P+  ++ I+++G     ++E
Sbjct: 533 EQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVE 568



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 188/387 (48%), Gaps = 3/387 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K  +A   L+ M     +PDVV  T L   L K  +   AIKV+++MV  G  P+  
Sbjct: 281 KKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNV 340

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N LCK+G V  A+ ++E M   G   + VTY++LV+GLC +G +++++  L+ L
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL 400

Query: 195 IQK--GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           + K   + P+ F ++ +++   K+R +  A ++   ++ +G   N+V+YN+L+ G    G
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAG 460

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           +  +A+  ++D    G  PN  +Y +L+  LC       A  L  +       PT+  YN
Sbjct: 461 KLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYN 520

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+ SL      + A  +  EM      P   S+N II      G V+   + L +M + 
Sbjct: 521 TLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNM 580

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+  T++ L      +G++ EA ++ + + +  +      +  ++     KGKT + 
Sbjct: 581 NLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKV 640

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLC 458
             +L +M       DS   S+++  LC
Sbjct: 641 VSMLQQMADKDVVLDSKLTSTILACLC 667



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 167/321 (52%), Gaps = 3/321 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS--GIIPD 132
           ++ +++DA   LE M  KG KPDVV  + L+  LC   K+ +A+ ++ +++S    I PD
Sbjct: 351 KEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPD 410

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             ++  ++  LCK+  + +A ++   M + G+P+N VTYN L+ G    G L ++L+   
Sbjct: 411 VFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWK 470

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
             +  G+ PNA TY+ L+    K + +  A  L +   A G +P +  YN L+  LC+E 
Sbjct: 471 DAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRES 530

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             E+A   F+++ +   +P+VVS+NI++      G  E A ELL EM   +  P  +T++
Sbjct: 531 SVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFS 590

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ILI      G+ D A  + + MV     P A  ++ ++     +GK + VV  L QM  +
Sbjct: 591 ILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADK 650

Query: 373 RCKPNEG-TYNGLAMLCGVGK 392
               +   T   LA LC + K
Sbjct: 651 DVVLDSKLTSTILACLCNMSK 671


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 225/464 (48%), Gaps = 5/464 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           ++  LC   ++++  +++E     G +P A  Y  L++  C++G+VG  + L+ +ME  G
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
                VTY +++  L    +L +    L  + ++GL PN   Y+ ++ A  K R    A+
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            +L+ ++A    P++V++N L+   C+EG  EEA++  R+   +  EPN +SY  L+   
Sbjct: 402 AVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGF 461

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C+ G    A++LL EM G   +P +VT   LI  L   G+ D AL V ++M + +  P A
Sbjct: 462 CVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDA 521

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
             YN +I+ LC +  +      L +M  ++ +P++  Y  L        K+ +A  I + 
Sbjct: 522 NIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEF 581

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  K        Y  +I   C+ G   +A   +  M K G  PD +TY++LI G   +G 
Sbjct: 582 MEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGD 641

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           I+ AL     M +   KP++  + +L+ G C    TD +  +F  M  +G  PN   YT+
Sbjct: 642 IKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTV 701

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGI 566
           L+  +  +D+   +A   + + L       A     M Y   G+
Sbjct: 702 LIGSLFKKDKAIQAAAYFEHMLLNHCSPNDA----TMHYLVNGL 741



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 207/464 (44%), Gaps = 49/464 (10%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + A   L +MV+    PDVV    L+   C+   +++A+K++   +   + P+  SYT L
Sbjct: 398 SQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPL 457

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  C +G V  A  L+ +M   G+  + VT  +L+ GL + G ++++L   +++ ++ +
Sbjct: 458 IHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQV 517

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P+A  Y+ L+    K+R + AA  LL +++ +  +P+   Y  L+ G  +  +  +A +
Sbjct: 518 MPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARK 577

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F  +  KG   ++V+YN +++  C  G   EA   ++ M      P   TY  LI   A
Sbjct: 578 IFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYA 637

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G    AL+ L +M+K R +P+  +Y  +I   C+ G  D                   
Sbjct: 638 KKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTD------------------- 678

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
                         +  FA +QS G   N      Y  +I SL +K K  QA      M 
Sbjct: 679 ------------SAEVLFASMQSEGLFPNVV---HYTVLIGSLFKKDKAIQAAAYFEHML 723

Query: 440 KYGFTPDSYTYSSLIRGL--CMEGLIEE-------------ALEIFVVMEEYDYKPDVDN 484
               +P+  T   L+ GL  C  G+I                L++F  +      P +  
Sbjct: 724 LNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISA 783

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +NA++  LC+      ++E+ + M  KG +P+  T+  L+ G +
Sbjct: 784 YNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFS 827



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 179/389 (46%), Gaps = 59/389 (15%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M+ +GH PDVV    L++ L  + ++ +A+ V E M    ++PDA+ Y  L++ LCK
Sbjct: 474 LVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCK 533

Query: 146 KGNVGYAMQLV-----------------------------------EKMEDYGYPTNTVT 170
           K  +  A  L+                                   E ME+ G   + V 
Sbjct: 534 KRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVA 593

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN++++G C  G +N+++  +  + + G +P+ FTY+ L++   K+  + AA++ L D++
Sbjct: 594 YNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMM 653

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +  KPN+V+Y  L+ G C  G T+ A   F  + S+G  PNVV Y +L+ SL  + +  
Sbjct: 654 KRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAI 713

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSL---------AYHGKTDHA------LKVLDEMV 335
           +A      M     SP   T + L+  L         +    TD A      L V   ++
Sbjct: 714 QAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLI 773

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
                P  ++YN II  LC    +   ++  ++M ++ C P+  T+  L++L G      
Sbjct: 774 SDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTF--LSLLYG------ 825

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
            F+ +   G  +++ P EF +     +C+
Sbjct: 826 -FSSVGKSGKWRSALPNEFQQDEFEIICK 853



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 113/271 (41%), Gaps = 53/271 (19%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL+DA    E M  KG   D+V    ++   CK+  M +A+  M  M   G IPD  
Sbjct: 568 RSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEF 627

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++   KKG++  A++ +  M       N VTY SL+ G C +GN + +      +
Sbjct: 628 TYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASM 687

Query: 195 IQKGLVPNAFTYSFLLEAAYK-ERGVHAAM------------------------------ 223
             +GL PN   Y+ L+ + +K ++ + AA                               
Sbjct: 688 QSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYG 747

Query: 224 ----------------KLLD---DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
                            LLD    +I+ G  P + +YN ++  LC+     +A+     +
Sbjct: 748 MINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKM 807

Query: 265 PSKGFEPNVVSYNILL---RSLCMEGRWEEA 292
            +KG  P+ V++  LL    S+   G+W  A
Sbjct: 808 SNKGCLPDPVTFLSLLYGFSSVGKSGKWRSA 838



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 68  NNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS 127
           ++ D  H+   L D F   + ++S G  P +     +++ LC+ N + KA+++ E M + 
Sbjct: 754 SDTDQAHKKSALLDVF---KGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNK 810

Query: 128 GIIPDASSYTYLVNCLCKKGNVG 150
           G +PD  ++  L+      G  G
Sbjct: 811 GCLPDPVTFLSLLYGFSSVGKSG 833


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 228/452 (50%), Gaps = 4/452 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P ++Q  ++L  L K N    AI +   +  +GI P   + T L+NC C  G + +   +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + K+   GY  N++T+ +L++G+C+ G   ++L F D ++  G   +  +Y+ L+    K
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                AAM++L          ++V Y+ ++  LCK     +A R + ++ +KG  PNV +
Sbjct: 128 MGETRAAMQMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           ++IL+ +LC + + ++A  LLA M      P +VTY  ++       + + AL + + MV
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           +    P+   YN II  LC + +VD  +    +M  ++  P+  TYN L   LC +GK+ 
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            +  ++  + +   +     Y  ++ +LC+     QA  L+ E+   G  P+  TY++LI
Sbjct: 305 TSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLI 364

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC +G +E+A  IF  +    Y   V  +N ++ GLCK    D +L +   M +   +
Sbjct: 365 DGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACI 424

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           P+  +Y  ++  ++ + E   + ++L  + +R
Sbjct: 425 PDAVSYETIIYALSEKGETVKTNKLLCAMIVR 456



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 191/398 (47%), Gaps = 39/398 (9%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F  L +++  G++P+ +  T L+  +C   +  +A+   + +V+ G   D  SY  L+N 
Sbjct: 65  FSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNG 124

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LCK G    AMQ++ K        + V Y++++  LC    +  + +    +I KG+ PN
Sbjct: 125 LCKMGETRAAMQMLRKT---WVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPN 181

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY--------------------- 241
            +T+S L++A  K+R    AM LL  ++ KG KPN+V+Y                     
Sbjct: 182 VYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFN 241

Query: 242 --------------NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
                         N+++ GLCK+ R +EA+  F+++  K   P+VV+YNIL+  LC  G
Sbjct: 242 VMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLG 301

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           +   + EL+ EM    ++  I+TYN L+ +L  +   D A+ ++ E+     +P+  +Y 
Sbjct: 302 KISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYT 361

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            +I  LC +G+++       ++          TYN +   LC  G   EA A++  + + 
Sbjct: 362 TLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDN 421

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                   Y+ +I +L  KG+T +  +LL  M   G +
Sbjct: 422 ACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 148/265 (55%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D K   A   L  M+ KG KP+VV    ++   C  N++ KA+ +  +MV  G+ 
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVE 249

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  ++N LCKK  V  AM L ++M       + VTYN L+ GLC LG ++ SL+ 
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLEL 309

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +   G   +  TY+ LL A  K   +  A+ L+ +I  +G +PN+ +Y  L+ GLCK
Sbjct: 310 VDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCK 369

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +GR E+A   F+++ ++G+   V +YN+++  LC +G ++EA  LL+ M+     P  V+
Sbjct: 370 DGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVS 429

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           Y  +I +L+  G+T    K+L  M+
Sbjct: 430 YETIIYALSEKGETVKTNKLLCAMI 454



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 149/294 (50%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + DA+     M++KG  P+V   + L+  LCK  K K+A+ ++ MM+  G+ P+  +Y  
Sbjct: 163 VTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGA 222

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++  C    V  A+ +   M   G   N   YN ++ GLC    +++++     +  K 
Sbjct: 223 IMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKK 282

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+  TY+ L++   K   +  +++L+D++ + G   ++++YN LL  LCK    ++AI
Sbjct: 283 INPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAI 342

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
              +++  +G +PNV +Y  L+  LC +GR E+A  +  E+       T+ TYN++I  L
Sbjct: 343 TLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGL 402

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
              G  D AL +L  M      P A SY  II  L  +G+     K L  M  R
Sbjct: 403 CKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVR 456



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 37/313 (11%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P ++ +N +L  L K      AI  FR L   G +P++V+  IL+   C  G       +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L ++      P  +T+  LI  +  +G+   AL   D +V   F+    SY  ++  LC 
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            G                                     E  A +Q L     ++    Y
Sbjct: 128 MG-------------------------------------ETRAAMQMLRKTWVNADVVMY 150

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I SLC+      A++L  EM   G  P+ YT+S L+  LC +   ++A+ +  +M +
Sbjct: 151 STIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMK 210

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              KP+V  + A++ G C   + + +L +F +M+++G  PN   Y I++ G+  +  ++ 
Sbjct: 211 KGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDE 270

Query: 536 SAEVLKELQLRQV 548
           +  + KE+  +++
Sbjct: 271 AMNLFKEMHWKKI 283



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 84/156 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++ +   ++ M S G   D++   +LL+ LCK + + +AI +++ +   GI P+  +YT
Sbjct: 302 KISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYT 361

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G +  A  + +++   GY     TYN ++ GLC  G  +++L  L R+   
Sbjct: 362 TLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDN 421

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
             +P+A +Y  ++ A  ++       KLL  +I +G
Sbjct: 422 ACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRG 457



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 67/125 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++H L+ A   ++ +  +G +P+V   T L+  LCK  +++ A  + + +++ G      
Sbjct: 334 KNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVW 393

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N LCKKG    A+ L+ +MED     + V+Y +++  L   G   ++ + L  +
Sbjct: 394 TYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAM 453

Query: 195 IQKGL 199
           I +GL
Sbjct: 454 IVRGL 458


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 237/486 (48%), Gaps = 17/486 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RM+  G +P  +    ++  +CK      A+ ++  M   S IIP+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ LCK G    A  L  +M++ G   +  TYNS++ G C  G  + + Q L  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++++ + P+  TY+ L+ A  KE     A +L D+++ +G  PN ++YN ++ G CK+ R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F  + +KG  P+V ++  L+   C   R ++  ELL EM         VTYN 
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +  +M+     P   + N ++  LC  GK+   ++    M   +
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 374 -----------CKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                       +P+  TYN   ++CG+   GK  EA  + + + ++        Y  +I
Sbjct: 496 MDLDASHPFNGVEPDVLTYN--ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC++ +  +A Q+   M    F+P+  T+++LI G C  G +++ LE+F  M      
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
            D   +  L+ G  K    + +L++FQ MI  G  P+  T   ++ G   ++ELE +  +
Sbjct: 614 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 673

Query: 540 LKELQL 545
           L++LQ+
Sbjct: 674 LEDLQM 679



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/528 (25%), Positives = 239/528 (45%), Gaps = 49/528 (9%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  K  + D+     L+   C  +K+  A+     +   G+ PD  ++T L++ LC +
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE 162

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A+    +M +     N VT+ +L+ GLC  G + +++  LDR+++ GL P   TY
Sbjct: 163 DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
             +++   K+    +A+ LL  +       PN+V Y+ ++  LCK+GR  +A   F ++ 
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P++ +YN ++   C  GRW +A +LL EM     SP +VTYN LI +    GK  
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++ DEM+     P+  +YN +I   C + ++D        M  + C P+  T+  L 
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              CG  ++ +   ++  +  +   +    Y  +I   C  G    A  L  +M   G  
Sbjct: 403 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 462

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVM------------------------------- 473
           PD  T ++L+ GLC  G +++ALE+F  M                               
Sbjct: 463 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 522

Query: 474 ------------EEYDYK---PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
                       EE  ++   PD   +++++ GLCK  R D + ++F  M  K   PN  
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 582

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGI 566
           T+  L+ G      ++   E+  E+  R +V++ A+  + + Y F  +
Sbjct: 583 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD-AIIYITLIYGFRKV 629



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 232/494 (46%), Gaps = 17/494 (3%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L DA      M+     P VV    L+  + +  +    I + + M    I  D 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+  L+ C C    + +A+    K+   G   + VT+ +L+ GLC+   ++++L F  +
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +    PN  T++ L+    +E  +  A+ LLD ++  G +P  ++Y  ++ G+CK+G 
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 254 TEEAIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           T  A+   R +       PNVV Y+ ++ SLC +GR  +A  L  EM      P + TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +I      G+   A ++L EM++ +  P   +YN +I     EGK     +  D+M  R
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPR 354

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
              PN  TYN +    C   ++  A  +   +  K   SP  F +  +I   C   +   
Sbjct: 355 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK-GCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
             +LL+EM + G   ++ TY++LI G C+ G +  AL++   M      PD+   N LL 
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQM------------PNETTYTILVEGIAHQDELELSAE 538
           GLC + +   +LE+F+ M +K +M            P+  TY IL+ G+ ++ +   + E
Sbjct: 474 GLCDNGKLKDALEMFKAM-QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 532

Query: 539 VLKELQLRQVVSES 552
           + +E+  R +V ++
Sbjct: 533 LYEEMPHRGIVPDT 546



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 190/412 (46%), Gaps = 12/412 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D + +DA      M  KG  PD+    +++   C + +   A ++++ M+   I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N   K+G    A +L ++M   G   NT+TYNS++ G C    L+ +   
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 382

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  P+ FT++ L++     + +   M+LL ++  +G   N V+YN L+ G C 
Sbjct: 383 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 442

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG----DRS- 305
            G    A+   + + S G  P++V+ N LL  LC  G+ ++A E+   M       D S 
Sbjct: 443 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 502

Query: 306 ------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P ++TYNILI  L   GK   A ++ +EM      P   +Y+ +I  LC + ++
Sbjct: 503 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D   +    M  +   PN  T+N L    C  G+V +   +   +G +   +    Y  +
Sbjct: 563 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 622

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           I    + G    A  +  EM   G  PD+ T  +++ G   +  +E A+ + 
Sbjct: 623 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 674



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 172/382 (45%), Gaps = 2/382 (0%)

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L  G   +  L  ++     +++   +P+   +  L+    +       + L   +  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            + ++ S+N+L+   C   +   A+  F  +   G  P+VV++  LL  LC+E R  EA 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +   +M      P +VT+  L+  L   G+   A+ +LD M++   +P+  +Y  I+  +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 354 CSEGKVDLVVKCLDQMFH-RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP 411
           C +G     +  L +M       PN   Y+ +   LC  G+  +A  +   +  K     
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I   C  G+   A QLL EM +   +PD  TY++LI     EG   EA E++ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M      P+   +N+++ G CK  R D + ++F +M  KG  P+  T+T L++G     
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 409

Query: 532 ELELSAEVLKELQLRQVVSESA 553
            ++   E+L E+  R +V+ + 
Sbjct: 410 RIDDGMELLHEMPRRGLVANTV 431


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 239/488 (48%), Gaps = 9/488 (1%)

Query: 62  PNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PN    NN  D   +  +  +A    +RMV     P VV    L+  L K    ++A +V
Sbjct: 288 PNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEV 347

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           +  M S G  P+   +  L++  C+KG++G A+++ ++M   G   N VT+N+L++G C 
Sbjct: 348 LVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCR 407

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
              + Q+ Q L  ++  GL  N    S+++    +  G  +A+K++  +++   + +   
Sbjct: 408 SNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSL 467

Query: 241 YNVLLTGLCK-EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
              L+ GLCK EG +E    +F+    KG   N V+ N LL  LC  G  EE  E+L +M
Sbjct: 468 LTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQM 527

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                    ++YN LI      GK + A K+ +EMV+  F+P   +YN ++  L   GK+
Sbjct: 528 LEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKI 587

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAML----CGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           D V + L +       PN  TY   A+L    C   ++++A    ++L  ++       Y
Sbjct: 588 DDVHRLLHEAKEYGFVPNVYTY---ALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVY 644

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I + CR G   +AF+L   M   G  P   TYSSLI G+C  G ++EA EIF  M  
Sbjct: 645 NILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRN 704

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P+V  + AL+ G CK  + D+   +   M   G  PN+ TYTI+++G      ++ 
Sbjct: 705 EGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKE 764

Query: 536 SAEVLKEL 543
           + E+L E+
Sbjct: 765 ARELLNEM 772



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 225/446 (50%), Gaps = 6/446 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F+   +   +G  P +     LL  L KAN++ K+ +V ++    G+ PD  ++T  +
Sbjct: 207 DIFVMFSK---RGVFPCLKTCNLLLSSLVKANELHKSYEVFDL-ACQGVAPDVFTFTTAI 262

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N  CK G VG A+ L  KME  G   N VTYN+++ GL   G   ++L+F DR+++  + 
Sbjct: 263 NAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVN 322

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY  L+    K      A ++L ++ + G  PN V +N L+ G C++G   EA+R 
Sbjct: 323 PSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRV 382

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++  KG +PN V++N LL+  C   + E+A ++L  +     S  +   + +I  L  
Sbjct: 383 RDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLME 442

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS-EGKVDLVVKCLDQMFHRRCKPNEG 379
                 ALK++ +++ G  R S +   P++  LC  EG  + +         +    N  
Sbjct: 443 RSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTV 502

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           T N L   LC  G ++E F +++ +  K     +  Y  +I   C+ GK  +AF+L  EM
Sbjct: 503 TSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEM 562

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            +  F PD+YTY+ L++GL   G I++   +    +EY + P+V  +  LL G CK+ R 
Sbjct: 563 VQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRI 622

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILV 524
           + +++ F+ +  +    +   Y IL+
Sbjct: 623 EDAVKFFKNLDYEKVELSSVVYNILI 648



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 2/311 (0%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           KG   + V +  LL+ LC+   M++  +V++ M+  G++ D  SY  L+   CK G +  
Sbjct: 495 KGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEE 554

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A +L E+M    +  +T TYN L++GL  +G ++   + L    + G VPN +TY+ LLE
Sbjct: 555 AFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLE 614

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K   +  A+K   ++  +  + + V YN+L+   C+ G   EA +    + S+G  P
Sbjct: 615 GYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILP 674

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
              +Y+ L+  +C  GR +EA E+  EM      P +  Y  LIG     G+ D    +L
Sbjct: 675 TCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSIL 734

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG 391
            EM     RP+  +Y  +I   C  G +    + L++M      P+  TYN L    G  
Sbjct: 735 LEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQK--GYC 792

Query: 392 KVQEAFAIIQS 402
           K +E    +QS
Sbjct: 793 KERELTVTLQS 803



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 141/286 (49%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + + F  L++M+ KG   D +    L++  CK  K+++A K+ E MV     PD  +Y +
Sbjct: 517 MEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNF 576

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L   G +    +L+ + ++YG+  N  TY  L+ G C    +  +++F   L  + 
Sbjct: 577 LMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEK 636

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +  ++  Y+ L+ A  +   V  A KL D + ++G  P   +Y+ L+ G+C  GR +EA 
Sbjct: 637 VELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAK 696

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++ ++G  PNV  Y  L+   C  G+ +    +L EM      P  +TY I+I   
Sbjct: 697 EIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGY 756

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
              G    A ++L+EM++    P   +YN +    C E ++ + ++
Sbjct: 757 CKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQ 802



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 166/354 (46%), Gaps = 4/354 (1%)

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++G+ P   T + LL +  K   +H + ++ D +  +G  P++ ++   +   CK GR  
Sbjct: 214 KRGVFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVG 272

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+  F  +   G  PNVV+YN ++  L   GR+EEA      M     +P++VTY +LI
Sbjct: 273 DAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLI 332

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L      + A +VL EM    F P+   +N +I   C +G +   ++  D+M  +  K
Sbjct: 333 SGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMK 392

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN  T+N L    C   ++++A  ++  + +   S   +   YVI  L  +     A ++
Sbjct: 393 PNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKI 452

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-YKPDVDNFNALLLGLC 493
           + ++            + L+ GLC      EA+E++  +        +    NALL GLC
Sbjct: 453 VTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLC 512

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           +    +   EV + M+EKG + +  +Y  L+ G     ++E  A  LKE  ++Q
Sbjct: 513 ERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIE-EAFKLKEEMVQQ 565



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 119/250 (47%), Gaps = 12/250 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++D    L      G  P+V     LL   CKA++++ A+K  + +    +   +  Y 
Sbjct: 586 KIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYN 645

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+ GNV  A +L + M+  G      TY+SL+ G+C +G ++++ +  + +  +
Sbjct: 646 ILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNE 705

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL+PN F Y+ L+    K   +     +L ++ + G +PN ++Y +++ G CK G  +EA
Sbjct: 706 GLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEA 765

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS------PTIVTY 311
                ++   G  P+ V+YN L +  C E       EL   +    +S         +TY
Sbjct: 766 RELLNEMIRNGIAPDTVTYNALQKGYCKE------RELTVTLQSDHKSNIGLPLEEEITY 819

Query: 312 NILIGSLAYH 321
           N LI  L  H
Sbjct: 820 NTLIHKLHPH 829



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 141/361 (39%), Gaps = 52/361 (14%)

Query: 224 KLLDDIIAKGGKPNLV--SYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILL 280
           K LD    K   P+L    ++ L   L +    +    FFR       F   V SY +LL
Sbjct: 66  KTLDSSKCKSILPHLTPHHFDRLFLSLHRTVNPKTTHEFFRFATRHCNFRFTVRSYCLLL 125

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           RSL  +     A  LLA +  G   PT  +      + ++H +       + E+ +G   
Sbjct: 126 RSLLADSFVPRARFLLARLIDG-HVPTWSSKT----TTSFHDRLREIASSMLELNQGSDE 180

Query: 341 PSAASYNPIIARLCSEGKV-------DL--------VVKCLD------------------ 367
                 + ++  LCS+ K        D+        V  CL                   
Sbjct: 181 QRLGELDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKS 240

Query: 368 -QMFHRRCK---PNEGTY-NGLAMLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVI 419
            ++F   C+   P+  T+   +   C  G+V +A   F  ++ LG   N      Y  VI
Sbjct: 241 YEVFDLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVT---YNNVI 297

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             L + G+  +A +    M +    P   TY  LI GL    + EEA E+ V M    + 
Sbjct: 298 DGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFA 357

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P+   FNAL+ G C+      +L V   M  KG  PN  T+  L++G    +++E + +V
Sbjct: 358 PNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQV 417

Query: 540 L 540
           L
Sbjct: 418 L 418


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 225/471 (47%), Gaps = 26/471 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RMV  G +P+ +    ++  +CK      A+ ++  M   S I P+ 
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ L K G    A  L  +M++ G   +  TYN ++ G C  G  +++ + L  
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++++ + PN  TYS L+ A  KER    A +L D+++ +G  PN ++YN ++ G CK+ R
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F  + +KG  P+V ++N L+   C   R ++  ELL EM          TYN 
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +  +M+     P   + N ++  LC  GK+   ++    M   +
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489

Query: 374 CKPNEGT-YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              +    +NG+                            + Y  +I+ L  +GK  +A 
Sbjct: 490 MDLDASRPFNGV------------------------EPDVQTYNILISGLINEGKFLEAE 525

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L  EM   G  P++ TYSS+I GLC +  ++EA ++F  M    + PDV  FN L+ G 
Sbjct: 526 ELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           CK+ R D  LE+F  M  +G + +  TY  L+ G      +  + ++ +E+
Sbjct: 586 CKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEM 636



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 235/502 (46%), Gaps = 18/502 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A     ++   G +PDVV  + LL+ LC  +++ +A+ +   M      P+  ++T
Sbjct: 127 KLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFT 182

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LC++G V  A+ L+++M + G   N +TY ++V G+C +G+   +L  L ++ + 
Sbjct: 183 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEM 242

Query: 198 GLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             + PN   YS +++  +K+     A  L  ++  KG  P+L +YN ++ G C  GR  E
Sbjct: 243 SHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSE 302

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A R  +++  +   PNVV+Y+ L+ +   E ++ EA EL  EM      P  +TYN +I 
Sbjct: 303 AQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMID 362

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A  +   M      P   ++N +I   C   ++D   + L +M       
Sbjct: 363 GFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVA 422

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TYN L    C VG +  A  + Q + +            ++  LC  GK   A ++ 
Sbjct: 423 DTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 482

Query: 436 YEMTKY-----------GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
             M K            G  PD  TY+ LI GL  EG   EA E++  M      P+   
Sbjct: 483 KAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTIT 542

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +++++ GLCK  R D + ++F  M  K   P+  T+  LV G      ++   E+  E+ 
Sbjct: 543 YSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMG 602

Query: 545 LRQVVSESAVERLVMQYDFEGI 566
            R +V++ A+  + + + F  +
Sbjct: 603 RRGIVAD-AITYITLIHGFRKV 623



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 232/491 (47%), Gaps = 21/491 (4%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L DA      MV     P V+    L+  + +  +    I + + M    I  D 
Sbjct: 53  HEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDV 112

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+  L+ C C    + +A+    K+   G+  + VT+++L+ GLC+   ++++L    +
Sbjct: 113 YSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQ 172

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +    PN  T++ L+    +E  V  A+ LLD ++  G +PN ++Y  ++ G+CK G 
Sbjct: 173 MCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGD 228

Query: 254 TEEAIRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           T  A+   R +      +PNVV Y+ ++  L  +GR  +A+ L  EM      P + TYN
Sbjct: 229 TVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYN 288

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +I      G+   A ++L EM++ +  P+  +Y+ +I     E K     +  D+M  R
Sbjct: 289 CMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR 348

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
              PN  TYN +    C   ++  A  +   +  K   SP  F +  +I   C   +   
Sbjct: 349 GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK-GCSPDVFTFNTLIDGYCGAKRIDD 407

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
             +LL+EMT+ G   D+ TY++LI G C+ G +  AL++   M      PD+   N LL 
Sbjct: 408 GTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 467

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQM------------PNETTYTILVEGIAHQDELELSAE 538
           GLC + +   +LE+F+ M +K +M            P+  TY IL+ G+ ++ +   + E
Sbjct: 468 GLCDNGKLKDALEMFKAM-QKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE 526

Query: 539 VLKELQLRQVV 549
           + KE+  R +V
Sbjct: 527 LYKEMPHRGIV 537



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 178/385 (46%), Gaps = 12/385 (3%)

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L  G   +  L  ++     +++   +P+   ++ L+    +       + L   +  K 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
              ++ S+N+L+   C   +   A+  F  +   GF+P+VV+++ LL  LC+E R  EA 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +L  +M      P +VT+  L+  L   G+   A+ +LD MV+   +P+  +Y  I+  +
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 354 CSEGK----VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQN 408
           C  G     ++L+ K +++M H   KPN   Y+ +   L   G+  +A  +   +  K  
Sbjct: 224 CKIGDTVSALNLLRK-MEEMSH--IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGI 280

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  +I   C  G+  +A +LL EM +    P+  TYS+LI     E    EA E
Sbjct: 281 FPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEE 340

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           ++  M      P+   +N+++ G CK  R D +  +F +M  KG  P+  T+  L++G  
Sbjct: 341 LYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYC 400

Query: 529 HQDELELSAEVLKELQLRQVVSESA 553
               ++   E+L E+    +V+++ 
Sbjct: 401 GAKRIDDGTELLHEMTETGLVADTT 425


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 231/479 (48%), Gaps = 17/479 (3%)

Query: 70  NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
           ND     HKL   F++   M +KG  PD V  T ++  LCKA K+  A ++     +   
Sbjct: 192 NDRVDAAHKL---FVE---MSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRF 240

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P    Y  L++ +CK+G +  A++L+ +M D G   N V+Y+ ++  LC+ GN+  +  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              ++  +G   N  T++ L++  +    ++ A+ L   +I  G +PN+V+YN L+ GLC
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
             G  EEA++    +   G  PNV +Y+IL+      G    A+E    M      P +V
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  ++  L  +   D A  ++++M      P+  ++N  I  LC  G+V+  +K L++M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
               C PN  TYN L   L  + K +EAF + Q +  +        Y  V+    R G  
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNA 487
            +A QL  +    G  PDS TY+++I   C +G ++ A ++   V    ++ PD+  + +
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV----EGIAHQDELELSAEVLKE 542
           L+ G C     + ++      I +G  PN  T+  LV    + + H   + +  ++L++
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 221/457 (48%), Gaps = 6/457 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R+   G KP V    +LL  L   NK +    +   M   G+IP+  +Y  L+  LCK  
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A +L  +M + G P + VTY ++V  LC  G ++ + +   R       P+   Y+
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYN 248

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++   KE  +  A+KLL +++  G  PN+VSY+ ++  LC  G  E A   F  +  +
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G + N+ ++  L++   M G+  EA +L   M      P +V YN LI  L  +G  + A
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
           L+V D+M +    P+  +Y+ +I      G +    +  ++M    C+PN  TY  +  +
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC      +A ++++ +  +  +     +   I  LC  G+   A +LL  M  +G  P+
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ L+  L      EEA  +F  +E  + +P++  +N +L G  ++     +L++F 
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             + +G  P+  TY  ++     Q +++++A++++ +
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 213/447 (47%), Gaps = 12/447 (2%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +    ++A+K+   +   G  P    Y +L++ L  +        L   M+  G   N  
Sbjct: 121 RVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TYN L++ LC    ++ + +    +  KG  P+A TY+ ++ +  K   +  A +L    
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL---- 236

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
            A   KP++  YN L+ G+CKEGR E AI+   ++   G +PNVVSY+ ++ SLC+ G  
Sbjct: 237 -AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           E A  L A+M        I T+  LI      GK   AL +   M++    P+  +YN +
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGN 405
           I  LCS G ++  ++  DQM    C PN  TY    +G A    +    E +  + S G 
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           + N      Y  ++  LC+     QA  L+ +MT  G TP++ T+++ I+GLC  G +E 
Sbjct: 416 RPNVVT---YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW 472

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A+++   M+ +   P++  +N LL  L +  + + +  +FQ +  +   PN  TY  ++ 
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 526 GIAHQDELELSAEVLKELQLRQVVSES 552
           G +    +  + ++  +  +R    +S
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDS 559



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 199/413 (48%), Gaps = 6/413 (1%)

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           AS+Y  ++  L ++  +     ++++M+  G       +  ++ G   +G+  Q+L+   
Sbjct: 74  ASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFY 133

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R+ + G  P    Y+ LL+A   E        L  ++   G  PN+ +YN+LL  LCK  
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R + A + F ++ +KG  P+ V+Y  ++ SLC  G+ ++A EL      G   P++  YN
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYN 248

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  +   G+ + A+K+L EM+     P+  SY+ II  LC  G V+L      QMF R
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 373 RCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C  N  T+  L   C + GK+ EA  + + +           Y  +I  LC  G   +A
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            Q+  +M + G  P+  TYS LI G    G +  A E +  M  +  +P+V  +  ++  
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           LCK+   D +  + + M  +G  PN  T+   ++G+     +E + ++L+ +Q
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 166/335 (49%), Gaps = 7/335 (2%)

Query: 213 AYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
            YK  G    A+K+   I   G KP +  YN LL  L  E + +     + ++   G  P
Sbjct: 118 GYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIP 177

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           NV +YNILL++LC   R + A++L  EM      P  VTY  ++ SL   GK D A ++ 
Sbjct: 178 NVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL- 236

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGV 390
                GRF+PS   YN +I  +C EG++++ +K L +M      PN  +Y+ +   LC  
Sbjct: 237 ----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVS 292

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V+ AFA+   +  +   +    +  +I     +GK Y+A  L   M + G  P+   Y
Sbjct: 293 GNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAY 352

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++LI GLC  G +EEAL++   M+     P+V  ++ L+ G  KS     + E +  MI 
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS 412

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            G  PN  TYT +V+ +      + +  +++++ L
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 90/164 (54%), Gaps = 1/164 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R +K  +AF   + + ++  +P++V    +LY   +A  M +A+++    +  G  
Sbjct: 497 DALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA 556

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           PD+ +Y  +++  CK+G V  A QLVE++     +  + +TY SL+ G C   N+ +++ 
Sbjct: 557 PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMA 616

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           FLD+ I +G+ PN  T++ L+   +   G    + +LDDI+ KG
Sbjct: 617 FLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 240/501 (47%), Gaps = 52/501 (10%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP+VV  T L+  LC+  ++ +A+ +++ M+  G+ P+  +Y  +V+ +CK G+   A+ 
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238

Query: 155 LVEKMEDYGYPT------------------------------------NTVTYNSLVRGL 178
           L+ KME+  +                                      + VTYN ++ G 
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C+ G  + + Q L  ++++ + P+  T+S L+ A  KE     A +L D+++ +   P+ 
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+Y+ ++ G CK+ R + A   F   P+KG  P+++++N L+   C   R ++  +LL E
Sbjct: 359 VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 418

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M         +TY  LI      G  + A  +L EM+     P+  + N ++  LC  GK
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478

Query: 359 VDLVVKCLDQMFHRR-----------CKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLG 404
           +   ++    M   +            +P+  TYN   ++CG+   GK  EA  + + + 
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYN--ILICGLINEGKFLEAEELYEEMP 536

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           ++        Y  +I  LC++ +  +A Q+   M    F+PD  T+++LI G C  G+++
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVD 596

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           + LE+F  M +     D   +  L+ G  K    D +L++FQ MI  G  P+  T   ++
Sbjct: 597 DGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNML 656

Query: 525 EGIAHQDELELSAEVLKELQL 545
            G+  ++ELE +  +L++LQ+
Sbjct: 657 TGLWSKEELERAVAMLEDLQM 677



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 239/518 (46%), Gaps = 52/518 (10%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L+DA      MV     P V+    L+  + +  +    I + + M    +  +A
Sbjct: 57  HEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNA 116

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ---- 189
            S+T L+ C C    + +A+    K+   G+    VT+N+L+ GLC+   ++++L     
Sbjct: 117 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQ 176

Query: 190 ---------------------------FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                                       LDR+++ GL PN  TY  +++   K     +A
Sbjct: 177 MCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 236

Query: 223 MKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           + LL  +       PN+V YN ++ GL K+GR  +A   F ++  K   P++V+YN ++ 
Sbjct: 237 LNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMIN 296

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C+ GRW +A +LL EM     +P +VT++ LI +    GK   A ++ DEM+     P
Sbjct: 297 GFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFH----RRCKPNEGTYNGL-AMLCGVGKVQEA 396
           S  +Y+ +I   C + ++D      + MF+    + C P+  T+N L A  C   +V + 
Sbjct: 357 STVTYSSMIDGFCKQNRLDAA----EHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDG 412

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             ++  +      +    Y  +I   C+ G    A  LL EM   G  P+  T ++L+ G
Sbjct: 413 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDG 472

Query: 457 LCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           LC  G +++ALE+F  M++              +PDV  +N L+ GL    +   + E++
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELY 532

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + M  +G +P+  TY+ +++G+  Q  L+ + ++   +
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 570



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 248/554 (44%), Gaps = 78/554 (14%)

Query: 83  FLQLERMVSKGHKPDVVQA-----------------TNLLYDLCKANKMKKAIKVMEMMV 125
           F +L  +V +  +PDVV +                 T L+   C  +K+  A+     + 
Sbjct: 84  FCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKIT 143

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
             G  P   ++  L++ LC +  +  A+ L  +M       N VT+ +L+ GLC  G + 
Sbjct: 144 KLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVV 199

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVL 244
           +++  LDR+++ GL PN  TY  +++   K     +A+ LL  +       PN+V YN +
Sbjct: 200 EAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTI 259

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + GL K+GR  +A   F ++  K   P++V+YN ++   C+ GRW +A +LL EM     
Sbjct: 260 IDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKI 319

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           +P +VT++ LI +    GK   A ++ DEM+     PS  +Y+ +I   C + ++D    
Sbjct: 320 NPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAA-- 377

Query: 365 CLDQMFH----RRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
             + MF+    + C P+  T+N L A  C   +V +   ++  +      +    Y  +I
Sbjct: 378 --EHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 435

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-- 477
              C+ G    A  LL EM   G  P+  T ++L+ GLC  G +++ALE+F  M++    
Sbjct: 436 HGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 478 ---------YKPDVDNFNALLLGL-----------------------------------C 493
                     +PDV  +N L+ GL                                   C
Sbjct: 496 IDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K  R D + ++F  M  K   P+  T+  L+ G      ++   E+  E+  R +V++ A
Sbjct: 556 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVAD-A 614

Query: 554 VERLVMQYDFEGIE 567
           +  + + Y F  ++
Sbjct: 615 ITYITLIYGFRKVD 628


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 231/479 (48%), Gaps = 17/479 (3%)

Query: 70  NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
           ND     HKL   F++   M +KG  PD V  T ++  LCKA K+  A ++     +   
Sbjct: 192 NDRVDAAHKL---FVE---MSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRF 240

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P    Y  L++ +CK+G +  A++L+ +M D G   N V+Y+ ++  LC+ GN+  +  
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              ++  +G   N  T++ L++  +    ++ A+ L   +I  G +PN+V+YN L+ GLC
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
             G  EEA++    +   G  PNV +Y+IL+      G    A+E    M      P +V
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  ++  L  +   D A  ++++M      P+  ++N  I  LC  G+V+  +K L++M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
               C PN  TYN L   L  + K +EAF + Q +  +        Y  V+    R G  
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNA 487
            +A QL  +    G  PDS TY+++I   C +G ++ A ++   V    ++ PD+  + +
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV----EGIAHQDELELSAEVLKE 542
           L+ G C     + ++      I +G  PN  T+  LV    + + H   + +  ++L++
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 221/457 (48%), Gaps = 6/457 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R+   G KP V    +LL  L   NK +    +   M   G+IP+  +Y  L+  LCK  
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A +L  +M + G P + VTY ++V  LC  G ++ + +   R       P+   Y+
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYN 248

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++   KE  +  A+KLL +++  G  PN+VSY+ ++  LC  G  E A   F  +  +
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G + N+ ++  L++   M G+  EA +L   M      P +V YN LI  L  +G  + A
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
           L+V D+M +    P+  +Y+ +I      G +    +  ++M    C+PN  TY  +  +
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC      +A ++++ +  +  +     +   I  LC  G+   A +LL  M  +G  P+
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ L+  L      EEA  +F  +E  + +P++  +N +L G  ++     +L++F 
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             + +G  P+  TY  ++     Q +++++A++++ +
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 213/447 (47%), Gaps = 12/447 (2%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +    ++A+K+   +   G  P    Y +L++ L  +        L   M+  G   N  
Sbjct: 121 RVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVF 180

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TYN L++ LC    ++ + +    +  KG  P+A TY+ ++ +  K   +  A +L    
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL---- 236

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
            A   KP++  YN L+ G+CKEGR E AI+   ++   G +PNVVSY+ ++ SLC+ G  
Sbjct: 237 -AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           E A  L A+M        I T+  LI      GK   AL +   M++    P+  +YN +
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGN 405
           I  LCS G ++  ++  DQM    C PN  TY    +G A    +    E +  + S G 
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           + N      Y  ++  LC+     QA  L+ +MT  G TP++ T+++ I+GLC  G +E 
Sbjct: 416 RPNVVT---YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEW 472

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A+++   M+ +   P++  +N LL  L +  + + +  +FQ +  +   PN  TY  ++ 
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532

Query: 526 GIAHQDELELSAEVLKELQLRQVVSES 552
           G +    +  + ++  +  +R    +S
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDS 559



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 199/413 (48%), Gaps = 6/413 (1%)

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           AS+Y  ++  L ++  +     ++++M+  G       +  ++ G   +G+  Q+L+   
Sbjct: 74  ASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFY 133

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R+ + G  P    Y+ LL+A   E        L  ++   G  PN+ +YN+LL  LCK  
Sbjct: 134 RIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R + A + F ++ +KG  P+ V+Y  ++ SLC  G+ ++A EL      G   P++  YN
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYN 248

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  +   G+ + A+K+L EM+     P+  SY+ II  LC  G V+L      QMF R
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308

Query: 373 RCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C  N  T+  L   C + GK+ EA  + + +           Y  +I  LC  G   +A
Sbjct: 309 GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEA 368

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            Q+  +M + G  P+  TYS LI G    G +  A E +  M  +  +P+V  +  ++  
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           LCK+   D +  + + M  +G  PN  T+   ++G+     +E + ++L+ +Q
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 166/335 (49%), Gaps = 7/335 (2%)

Query: 213 AYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
            YK  G    A+K+   I   G KP +  YN LL  L  E + +     + ++   G  P
Sbjct: 118 GYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIP 177

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           NV +YNILL++LC   R + A++L  EM      P  VTY  ++ SL   GK D A ++ 
Sbjct: 178 NVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL- 236

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGV 390
                GRF+PS   YN +I  +C EG++++ +K L +M      PN  +Y+ +   LC  
Sbjct: 237 ----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVS 292

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V+ AFA+   +  +   +    +  +I     +GK Y+A  L   M + G  P+   Y
Sbjct: 293 GNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAY 352

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++LI GLC  G +EEAL++   M+     P+V  ++ L+ G  KS     + E +  MI 
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS 412

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            G  PN  TYT +V+ +      + +  +++++ L
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 90/164 (54%), Gaps = 1/164 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R +K  +AF   + + ++  +P++V    +LY   +A  M +A+++    +  G  
Sbjct: 497 DALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA 556

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           PD+ +Y  +++  CK+G V  A QLVE++     +  + +TY SL+ G C   N+ +++ 
Sbjct: 557 PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMA 616

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           FLD+ I +G+ PN  T++ L+   +   G    + +LDDI+ KG
Sbjct: 617 FLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 240/484 (49%), Gaps = 18/484 (3%)

Query: 96  PDVVQATN---LLYDLCK-ANKMKKAIKVMEMM---VSSGIIPDASSYTYLVNCLCKKGN 148
           PDV  A +   +L  LC+    +++A+ ++  M         P+A SYT ++  LC    
Sbjct: 71  PDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRR 130

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ L+  M+  G   + VTY +L+RGLC    L+ +L+ L  +   G+ PN   YS 
Sbjct: 131 TDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSC 190

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL    +        K+ +++   G +P+++ +   +  LCK+GR  +A++    +  +G
Sbjct: 191 LLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRG 250

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            EPNVV+YN+L+  LC EG   EA  L  EMD    +P +VTYN LI  L+   + D A+
Sbjct: 251 LEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAM 310

Query: 329 KVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-A 385
            +L+EM++G     P   ++N +I  LC  G++   +   + M  R C  N  TYN L  
Sbjct: 311 GLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIG 370

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
               V KV  A  ++  L +     P  F Y  +I    +  +  +A   L  MT+ G  
Sbjct: 371 GFLRVHKVNMAMNLMSELIS-SGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIR 429

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD--NFNALLLGLCKSRRTDLSL 502
            + + Y  L+  LC  G++E+A+ +F    E D    +D   ++ ++ G CKS     + 
Sbjct: 430 AELFHYIPLLAALCQLGMMEQAMVLF---NEMDMNCGLDAVAYSTMMYGACKSGDIKAAK 486

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV-ERLVMQY 561
           ++ Q M+++G  P+  TY+IL+   A   +LE +  VLK++     V + AV + L+  Y
Sbjct: 487 QLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGY 546

Query: 562 DFEG 565
             EG
Sbjct: 547 SAEG 550



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 230/486 (47%), Gaps = 17/486 (3%)

Query: 74  HRDHKLNDAFLQLERMVSKGH---KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            R   L  A   L  M  + H   +P+ V  T ++  LC + +  +A+ ++  M +SG+ 
Sbjct: 88  RRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVR 147

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L+  LC    +  A++L+ +M   G   N + Y+ L+RG C  G      + 
Sbjct: 148 ADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKV 207

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + + + G+ P+   ++  ++   K+  +  A+K+ D ++ +G +PN+V+YNVL+  LCK
Sbjct: 208 FEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCK 267

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTI 308
           EG   EA+    ++  KG  P+VV+YN L+  L      + A  LL EM  GD    P +
Sbjct: 268 EGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDV 327

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VT+N +I  L   G+   A+ V + M +     +  +YN +I       KV++ +  + +
Sbjct: 328 VTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSE 387

Query: 369 MFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV--ITSL 422
           +     +P+  TY    NG + L  V + +     +   G +      E + Y+  + +L
Sbjct: 388 LISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIR-----AELFHYIPLLAAL 442

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ G   QA  L  EM       D+  YS+++ G C  G I+ A ++   M +    PD 
Sbjct: 443 CQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDA 501

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             ++ L+    K    + +  V + M   G +P+   +  L++G + + ++    +++ E
Sbjct: 502 VTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHE 561

Query: 543 LQLRQV 548
           ++ + V
Sbjct: 562 MRAKNV 567


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 232/487 (47%), Gaps = 34/487 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   L +M  +G+ PDVV    ++   C+  ++ K +K+++ +   G+ PD   Y 
Sbjct: 257 KVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYN 316

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK G V  A QL+  M  +G   + V Y +++ G C LGN++ + +  D + +K
Sbjct: 317 NIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRK 376

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            +VP+  TY+ ++    K   +  A ++ ++++ KG +P+ V+Y  L+ G CK G  +EA
Sbjct: 377 KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEA 436

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  KG  PNVV+Y  L   LC  G  + ANELL EM      P + TYN ++  
Sbjct: 437 FSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNG 496

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  +  +K+++EM    F P   +Y  ++   C  G++    + L  M ++R +P 
Sbjct: 497 LCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             T+N L                                  +   C  G      +L+  
Sbjct: 557 LVTFNVL----------------------------------MNGFCMSGMLEDGERLIEW 582

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + G  P++ T++SL++  C++  +    EI+  M +    PD + +N L+ G CK+R 
Sbjct: 583 MLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARN 642

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +  + + M+EKG      TY  L+ G   + +   + ++ +E++   +V+E  +  +
Sbjct: 643 MKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDI 702

Query: 558 VMQYDFE 564
            +  ++E
Sbjct: 703 FVDVNYE 709



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 207/419 (49%), Gaps = 1/419 (0%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           C    +K A+KV E     G+  +  S   +++CLC+ G V  A  L+ +M D G   + 
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDV 277

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           V+Y  +V G C +G L++ L+ +D L  KGL P+ + Y+ ++    K   V  A +LL  
Sbjct: 278 VSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRG 337

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +   G  P+ V Y  +++G CK G    A + F ++  K   P++V+Y  ++  +C  G+
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             EA E+  EM      P  VTY  LI      G+   A  V ++MV+    P+  +Y  
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +   LC  G++D+  + L +M  +  +PN  TYN +   LC +G +++   +++ +    
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                  Y  ++ + C+ G+  +A +LL  M      P   T++ L+ G CM G++E+  
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE 577

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            +   M E    P+   FN+L+   C       + E+++ M ++G MP+  TY IL++G
Sbjct: 578 RLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG 636



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 212/447 (47%), Gaps = 2/447 (0%)

Query: 116 KAIKVMEMMVSSGIIPDASSYTYLVNCL-CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           +A K+   ++  G++    S    ++ L C    +  A+++ E+  + G   NTV+ N +
Sbjct: 189 EAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIV 248

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +  LC LG + ++   L ++  +G  P+  +Y  ++    +   +   +KL+D++  KG 
Sbjct: 249 LHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGL 308

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           KP+   YN ++  LCK G   EA +  R +   G  P+ V Y  ++   C  G    A +
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACK 368

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L  EM      P IVTY  +I  +   GK   A ++ +EM+     P   +Y  +I   C
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
             G++       +QM  +   PN  TY  LA  LC  G++  A  ++  +  K       
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  ++  LC+ G   Q  +L+ EM   GF PD+ TY++L+   C  G + +A E+  +M
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
                +P +  FN L+ G C S   +    + + M+EKG MPN TT+  L++    ++ +
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608

Query: 534 ELSAEVLKELQLRQVVSESAVERLVMQ 560
             + E+ K +  R V+ +S    ++++
Sbjct: 609 RATTEIYKAMHDRGVMPDSNTYNILIK 635



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 77/169 (45%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L D    +E M+ KG  P+     +L+   C  N M+   ++ + M   G++PD+++Y  
Sbjct: 573 LEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNI 632

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   CK  N+  A  L ++M + GY     TY++L+RG        ++ +  + + + G
Sbjct: 633 LIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHG 692

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           LV     Y   ++  Y+E      ++L D+ + +      V Y     G
Sbjct: 693 LVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIFVVYICFFIG 741


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 237/506 (46%), Gaps = 38/506 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNL-LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           L +A   L RM   G  P    + N+ +  + +A +   A++V + M    ++P+  +Y 
Sbjct: 43  LGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYN 102

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++   K G++    +L ++M  +G   N +TYN L+ GLC  G + ++   LD +  +
Sbjct: 103 TMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 162

Query: 198 GLVPNAFTYSFL-----------------------------------LEAAYKERGVHAA 222
            +VP+ FTYS L                                   L    K+  V  A
Sbjct: 163 KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIA 222

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            ++L  ++  G  P  V YN L+ G C+ G  E A   F  + S+  +P+ ++YN L+  
Sbjct: 223 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 282

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC   R   A +LL EM     +PT+ T+N LI +    G+ +    VL EM +   +P+
Sbjct: 283 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 342

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
             SY  I+   C  GK+   V  LD MFH+   PN   YN +       G   +AF +++
Sbjct: 343 VVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVE 402

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            + +   S     Y  +I  LC + +  +A +++  ++ +   PD+ +Y++LI   C  G
Sbjct: 403 KMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRG 462

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I++AL++   M +Y  K  V  ++ L+ GL  + R +    ++Q M++   +P+   + 
Sbjct: 463 NIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHN 522

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQ 547
           I+VE  +     E+ AE L++  L++
Sbjct: 523 IMVEAYSKYGN-EIKAEDLRKEMLQK 547



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 208/436 (47%), Gaps = 2/436 (0%)

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRG 177
           +   ++ S+G  PD  ++   V      G++G A+ ++ +M  D   P N  +YN ++ G
Sbjct: 13  RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAG 72

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           +   G    +++  D + ++ ++PN  TY+ +++   K   + A  +L D ++  G KPN
Sbjct: 73  MWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPN 132

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
            ++YNVLL+GLC+ GR  E      ++ S+   P+  +Y+IL   L   G  +    L  
Sbjct: 133 AITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFG 192

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +      +    T +IL+  L   GK   A +VL  +V     P+   YN +I   C  G
Sbjct: 193 KYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 252

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           +++       QM  R  KP+  TYN L   LC   ++  A  ++  + +   +   E + 
Sbjct: 253 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 312

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I +  R G+  + F +L EM + G  P+  +Y S++   C  G I EA+ I   M   
Sbjct: 313 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 372

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           D  P+   +NA++    +    D +  + + M   G  P+  TY +L++G+ +Q ++  +
Sbjct: 373 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 432

Query: 537 AEVLKELQLRQVVSES 552
            E++  L   +++ ++
Sbjct: 433 EEIINSLSNHRLIPDA 448



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 187/411 (45%), Gaps = 1/411 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L   F   ++MV  G KP+ +    LL  LC+A +M +   +++ M S  ++
Sbjct: 106 DGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV 165

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L + L + G+    + L  K    G      T + L+ GLC  G ++ + + 
Sbjct: 166 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 225

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  L+  GLVP    Y+ L+    +   +  A      + ++  KP+ ++YN L+ GLCK
Sbjct: 226 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 285

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R   A     ++   G  P V ++N L+ +    G+ E+   +L+EM      P +V+
Sbjct: 286 AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 345

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  ++ +   +GK   A+ +LD+M      P+A  YN II      G  D     +++M 
Sbjct: 346 YGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 405

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                P+  TYN L   LC   ++ EA  II SL N +       Y  +I++ C +G   
Sbjct: 406 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 465

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +A  L   M KYG      TY  LI GL   G + E   ++  M + +  P
Sbjct: 466 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 516



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 146/308 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K++ A   L+ +V+ G  P  V    L+   C+  +++ A      M S  I PD  
Sbjct: 215 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 274

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK   +  A  L+ +M+D G      T+N+L+      G L +    L  +
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL PN  +Y  ++ A  K   +  A+ +LDD+  K   PN   YN ++    + G  
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 394

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      + S G  P++V+YN+L++ LC + +  EA E++  +      P  V+YN L
Sbjct: 395 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 454

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +  Y G  D AL +   M K   + +  +Y+ +I+ L   G+++ +     +M     
Sbjct: 455 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 514

Query: 375 KPNEGTYN 382
            P+   +N
Sbjct: 515 VPSNAIHN 522



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 114/229 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L   F+ L  M   G KP+VV   +++   CK  K+ +A+ +++ M    ++
Sbjct: 316 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 375

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A  Y  +++   + G    A  LVEKM+  G   + VTYN L++GLC    ++++ + 
Sbjct: 376 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 435

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++ L    L+P+A +Y+ L+ A      +  A+ L   +   G K  + +Y+ L++GL  
Sbjct: 436 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 495

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            GR  E    ++ +      P+   +NI++ +    G   +A +L  EM
Sbjct: 496 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 233/519 (44%), Gaps = 58/519 (11%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  K  + D+     L+   C  +K+  A+     +   G+ PD  ++T L++ LC +
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVE 162

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A+    +M +     N VT+ +L+ GLC  G + +++  LDR+++ GL P   TY
Sbjct: 163 DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222

Query: 207 SFLLEAAYKERGVHAAMKLL------DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
             +++   K+    +A+ LL        II     PN+V Y+ ++  LCK+GR  +A   
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++  KG  P++ +YN ++   C  GRW +A +LL EM     SP +VTYN LI +   
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK   A ++ DEM+     P+  +Y+ +I   C + ++D        M  + C PN  T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +N L    CG  ++ +   ++  +      +    Y  +I      G    A  LL EM 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNAL 488
             G  PD  T  +L+ GLC  G +++ALE+F VM++              +PDV  +N L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 489 LLGL-----------------------------------CKSRRTDLSLEVFQMMIEKGQ 513
           + GL                                   CK  R D + ++F  M  K  
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            PN  T+T L+ G      ++   E+  E+  R +V+ +
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 226/478 (47%), Gaps = 40/478 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RM+  G +P  +    ++  +CK      A+ ++  M   S IIP+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNV 255

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ LCK G    A  L  +M++ G   +  TYNS++ G C  G  + + Q L  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++++ + P+  TY+ L+ A  KE     A +L D+++ +G  PN ++Y+ ++ G CK+ R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F  + +KG  PN++++N L+   C   R ++  ELL EM          TYN 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +L EM+     P   + + ++  LC  GK+              
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK------------- 482

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS-------PQ-EFYKYVITSLCRK 425
                                E F ++Q      ++S       P  + Y  +I+ L  +
Sbjct: 483 ------------------DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +A +L  EM   G  PD+ TYSS+I GLC +  ++EA ++F  M    + P+V  F
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             L+ G CK+ R D  LE+F  M  +G + N  TY  L+ G      +  + ++ +E+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 230/518 (44%), Gaps = 48/518 (9%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L DA      M+     P VV    L+  + +  +    I + + M    I  D 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+  L+ C C    + +A+    K+   G   + VT+ +L+ GLC+   ++++L F  +
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK------------------ 235
           + +    PN  T++ L+    +E  +  A+ LLD ++  G +                  
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 236 ------------------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                             PN+V Y+ ++  LCK+GR  +A   F ++  KG  P++ +YN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            ++   C  GRW +A +LL EM     SP +VTYN LI +    GK   A ++ DEM+  
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA 396
              P+  +Y+ +I   C + ++D        M  + C PN  T+N L    CG  ++ + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             ++  +      +    Y  +I      G    A  LL EM   G  PD  T  +L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 457 LCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           LC  G +++ALE+F VM++              +PDV  +N L+ GL    +   + E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + M  +G +P+  TY+ +++G+  Q  L+ + ++   +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 180/399 (45%), Gaps = 12/399 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D + +DA      M  KG  PD+    +++   C + +   A ++++ M+   I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N   K+G    A +L ++M   G   NT+TY+S++ G C    L+ +   
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  PN  T++ L++     + +   M+LL ++   G   +  +YN L+ G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS----- 305
            G    A+   +++ S G  P++V+ + LL  LC  G+ ++A E+   M    +      
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 306 ------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P + TYNILI  L   GK   A ++ +EM      P   +Y+ +I  LC + ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D   +  D M  +   PN  T+  L    C  G+V +   +   +G +   +    Y  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           I    + G    A  +  EM   G  PD+ T  +++ GL
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 179/407 (43%), Gaps = 37/407 (9%)

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L  G   +  L  ++     +++   +P+   +  L+    +       + L   +  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            + ++ S+N+L+   C   +   A+  F  +   G  P+VV++  LL  LC+E R  EA 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +   +M      P +VT+  L+  L   G+   A+ +LD M++   +P+  +Y  I+  +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 354 CSEGKVDLVVKCLDQM----------------FHRRCK--------------------PN 377
           C +G     +  L +M                    CK                    P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN + +  C  G+  +A  ++Q +  ++ S     Y  +I +  ++GK ++A +L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G  P++ TYSS+I G C +  ++ A  +F +M      P++  FN L+ G C ++
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R D  +E+   M E G + + TTY  L+ G     +L  + ++L+E+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 228/472 (48%), Gaps = 19/472 (4%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G   + V  +N    LC A K  KA +++  M+S G +PD S+Y+ ++  LC    
Sbjct: 409 MLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASK 468

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A  L E+M+  G   +  TY  L+   C  G + Q+  + D +++    PN  TY+ 
Sbjct: 469 VEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTS 528

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR----DL 264
           L+ A  K R V  A KL + ++ +G KPN+V+Y  L+ G CK G+ ++A + +     D+
Sbjct: 529 LIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDI 588

Query: 265 PSKGFE------------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
            S   +            PN+++Y  L+  LC   R EEA+ELL  M      P  + Y+
Sbjct: 589 ESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI      GK ++A +V  +M +  + P+  +Y+ +I  L  E ++DLV+K L +M   
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN 708

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C PN   Y  +   LC VGK +EA+ ++  +           Y  +I    + GK  Q 
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQC 768

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L  +M   G  P+  TY  LI   C  GL++EA  +   M++  +   + ++  ++ G
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEG 828

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              +R    S+ +   + E   +P E+ Y IL++       LE +  +L+E+
Sbjct: 829 F--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEI 878



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 223/553 (40%), Gaps = 96/553 (17%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   N A  +L R+   G+K        L+    +A+K+  A  V   M +SG   D  
Sbjct: 182 RNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGC 241

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +       LCK G  G A+ L+EK E   +  +TV YN +V GLC      +++  LDR+
Sbjct: 242 TLGCFAYSLCKAGRCGDALSLLEKEE---FVPDTVFYNRMVSGLCEASLFQEAMDILDRM 298

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TY  LL     +  +    ++L  ++ +G  PN   +N L+   CK    
Sbjct: 299 RSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDY 358

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL---------------------------------- 280
             A + F+ +   G +P  + YNI +                                  
Sbjct: 359 SYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNK 418

Query: 281 -------RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
                  R LC  G++++A E++ EM      P   TY+ +IG L    K + A  + +E
Sbjct: 419 VNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEE 478

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--------- 384
           M K    PS  +Y  +I   C  G +       D+M    C PN  TY  L         
Sbjct: 479 MKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARK 538

Query: 385 ---------AML------------------CGVGKVQEAFAIIQSL-GNKQNSSPQEFYK 416
                     ML                  C  G++ +A  I   + G+ ++S    ++K
Sbjct: 539 VFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFK 598

Query: 417 Y---------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                           ++  LC+  +  +A +LL  M+  G  P+   Y +LI G C  G
Sbjct: 599 LDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTG 658

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +E A E+FV M E  Y P++  +++L+  L K +R DL L+V   M+E    PN   YT
Sbjct: 659 KLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYT 718

Query: 522 ILVEGIAHQDELE 534
            +++G+    + E
Sbjct: 719 DMIDGLCKVGKTE 731



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 21/414 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV----SSGI- 129
           +  K+ DA    E M+ +G KP+VV  T L+   CKA ++ KA ++   M     SS I 
Sbjct: 535 KARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDID 594

Query: 130 -----------IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
                       P+  +Y  LV+ LCK   V  A +L++ M   G   N + Y++L+ G 
Sbjct: 595 MYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGF 654

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C  G L  + +   ++ ++G  PN +TYS L+ + +KE+ +   +K+L  ++     PN+
Sbjct: 655 CKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNV 714

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V Y  ++ GLCK G+TEEA R    +   G  PNV++Y  ++      G+ E+  EL  +
Sbjct: 715 VIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRD 774

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M     +P  +TY +LI      G  D A ++LDEM +  +    +SY  II     E  
Sbjct: 775 MCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFI 834

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
             + +  LD++      P E  Y  L       G+++ A  +++ + +  + +    Y Y
Sbjct: 835 TSIGL--LDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLY 892

Query: 418 --VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
             +I SL    K  +AF+L   M      P+  T+  LI+GL   G  +EAL++
Sbjct: 893 TSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 204/469 (43%), Gaps = 10/469 (2%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           FL   R +   H P V  A   L      N  + + K +  +             +L+  
Sbjct: 120 FLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQK 179

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            C+ G    A++ + +++D+GY  +  TYN+L++       L+ +      +   G   +
Sbjct: 180 CCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMD 239

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             T      +  K      A+ LL+    +   P+ V YN +++GLC+    +EA+    
Sbjct: 240 GCTLGCFAYSLCKAGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQEAMDILD 296

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            + S    PNVV+Y ILL     +G+      +L+ M      P    +N L+ +     
Sbjct: 297 RMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSR 356

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMFHRRCKP 376
              +A K+  +M+K   +P    YN  I  +CS  ++      +L  K   +M       
Sbjct: 357 DYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVL 416

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N+   +  A  LCG GK  +AF II  + +K        Y  VI  LC   K  +AF L 
Sbjct: 417 NKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLF 476

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM K G  P  YTY+ LI   C  GLI++A   F  M   +  P+V  + +L+    K+
Sbjct: 477 EEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKA 536

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           R+   + ++F+MM+ +G  PN  TYT L++G     +++ + ++   +Q
Sbjct: 537 RKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQ 585



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 160/356 (44%), Gaps = 11/356 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + +++ +A   L+ M   G +P+ +    L+   CK  K++ A +V   M   G  
Sbjct: 617 DGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYC 676

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L+N L K+  +   ++++ KM +     N V Y  ++ GLC +G   ++ + 
Sbjct: 677 PNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRL 736

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + ++ + G  PN  TY+ +++   K   +   ++L  D+ +KG  PN ++Y VL+   C 
Sbjct: 737 MLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCS 796

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +EA R   ++    +  ++ SY  ++     E  +  +  LL E+   +  P    
Sbjct: 797 TGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNRE--FITSIGLLDELSENESVPVESL 854

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS-----YNPIIARLCSEGKVDLVVKC 365
           Y ILI +    G+ + AL +L+E+      PS A      Y  +I  L    KVD   + 
Sbjct: 855 YRILIDNFIKAGRLEGALNLLEEISSS---PSLAVANKYLYTSLIESLSHASKVDKAFEL 911

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
              M ++   P   T+  L   L  VGK QEA  +  S+          F  Y  T
Sbjct: 912 YASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVCHVCSNFVNYKTT 967


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 229/476 (48%), Gaps = 9/476 (1%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P++     ++    K   + +A   +  +  +G+ PD+ +YT L+   C+  +V  A ++
Sbjct: 212 PNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKV 271

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
              M + G   N V+Y +++ GLC  G +++ +    ++ +    P   TY+ ++ A + 
Sbjct: 272 FNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFG 331

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                  M L +++  +  +PN+ +Y V++  +CKE + +E+ R   ++  KG  P+VV+
Sbjct: 332 NDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVT 391

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN L+R  C EGR E A E+L  M+  +  P   TYN LI   +       A+ +L +M+
Sbjct: 392 YNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKML 451

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQ 394
           + +  PS  +YN +I   C  G  D   K LD +      P++ TY+  +  LC   +++
Sbjct: 452 ESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRME 511

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  +  SL  K   + +  Y  +I   C+ GK  +A  LL  M      P+S TY+SLI
Sbjct: 512 EACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLI 571

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G+C EG ++E L +   M +   KP V  +  L+  + +    D +  VF  M+  G  
Sbjct: 572 YGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHK 631

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE--------SAVERLVMQYD 562
           P+  TYT  +        ++ +  ++  +    V+ +        SA ERL + YD
Sbjct: 632 PDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYD 687



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 222/450 (49%), Gaps = 7/450 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A L + ++   G  PD    T+L+   C+ N +  A KV  MM + G   +  SYT ++
Sbjct: 232 EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII 291

Query: 141 NCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLN--QSLQFLDRLIQK 197
           + LC+ G +   + L +KM ED  YPT   TY  ++  L   GN    + +   + + ++
Sbjct: 292 HGLCEAGRIDEGISLFKKMREDDCYPT-VRTYTVIIHAL--FGNDRNLEGMDLFNEMRER 348

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  TY+ +++A  KER +  + ++L++++ KG  P++V+YN L+ G C+EGR E A
Sbjct: 349 SCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAA 408

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     + S    PN  +YN L+          +A  LL++M     +P++VTYN LI  
Sbjct: 409 LEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHV 468

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  D A K+LD + +    P   +Y+  I  LC   +++      + +  +  K N
Sbjct: 469 QCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN 528

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           E  Y  L    C  GK+ EA ++++ + ++        Y  +I  +C++GK  +   ++ 
Sbjct: 529 EVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVE 588

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M+K G  P   TY+ LI  +  EG  + A  +F  M  + +KPDV  + A +   C S 
Sbjct: 589 NMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSG 648

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
               +  +   MIE G MP+  TYT+L+  
Sbjct: 649 NVKEAEGMMARMIEAGVMPDSLTYTLLISA 678



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 198/426 (46%), Gaps = 1/426 (0%)

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           +V   M++  I+P+  +   +VN   K GN+  A   V K+   G   ++ TY SL+ G 
Sbjct: 200 RVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGY 259

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C   ++N + +  + +  KG   N  +Y+ ++    +   +   + L   +      P +
Sbjct: 260 CRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTV 319

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            +Y V++  L    R  E +  F ++  +  EPNV +Y +++ ++C E + +E+  +L E
Sbjct: 320 RTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNE 379

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P++VTYN LI      G+ + AL++L  M     RP+  +YN +I        
Sbjct: 380 MMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKH 439

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           V   +  L +M   +  P+  TYN L  + C  G    A+ ++  L        Q  Y  
Sbjct: 440 VHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSV 499

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            I +LC+  +  +A  L   + + G   +   Y++LI G C  G I+EA+ +   M   D
Sbjct: 500 FIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSED 559

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             P+   +N+L+ G+CK  +    L + + M + G  P   TYTIL+E +  + + + + 
Sbjct: 560 CLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHAN 619

Query: 538 EVLKEL 543
            V  ++
Sbjct: 620 RVFNQM 625



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 181/384 (47%), Gaps = 34/384 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL+++   L  M+ KG  P VV    L+   C+  +++ A++++ +M S+   
Sbjct: 362 DAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCR 421

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L+    K+ +V  AM L+ KM +     + VTYNSL+   C  G+ + + + 
Sbjct: 422 PNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKL 481

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD L + GLVP+ +TYS  ++   K + +  A  L + +  KG K N V Y  L+ G CK
Sbjct: 482 LDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCK 541

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EAI     + S+   PN  +YN L+  +C EG+ +E   ++  M      PT+ T
Sbjct: 542 AGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVAT 601

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ILI  +   G  DHA +V ++MV    +P   +Y   I   C+ G V           
Sbjct: 602 YTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNV----------- 650

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
               K  EG          + ++ EA  +  SL           Y  +I++  R G  Y 
Sbjct: 651 ----KEAEGM---------MARMIEAGVMPDSLT----------YTLLISAYERLGLAYD 687

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLI 454
           AF +L  M   G  P    +++LI
Sbjct: 688 AFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 212/459 (46%), Gaps = 45/459 (9%)

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           + +  Q+     D  +  +  +YN L+  L     +++  +    ++   +VPN +T + 
Sbjct: 160 LDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNT 219

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++ A  K   +  A   +  I   G  P+  +Y  L+ G C+      A + F  +P+KG
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMD-------------------GGDRS---- 305
              N VSY  ++  LC  GR +E   L  +M                    G DR+    
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339

Query: 306 ------------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
                       P + TY +++ ++    K D + ++L+EM++    PS  +YN +I   
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGY 399

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSS 410
           C EG+++  ++ L  M    C+PNE TYN L  +CG  K   V +A  ++  +   + + 
Sbjct: 400 CEEGRIEAALEILGLMESNNCRPNERTYNEL--ICGFSKRKHVHKAMTLLSKMLESKLTP 457

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+ G    A++LL  + + G  PD +TYS  I  LC    +EEA ++F
Sbjct: 458 SLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLF 517

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             ++E   K +   + AL+ G CK+ + D ++ + + M  +  +PN +TY  L+ G+  +
Sbjct: 518 NSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKE 577

Query: 531 DELE--LS-AEVLKELQLRQVVSESA--VERLVMQYDFE 564
            +++  LS  E + ++ ++  V+     +E ++ + DF+
Sbjct: 578 GKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFD 616


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 235/471 (49%), Gaps = 5/471 (1%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA    + M+++    D      ++  LC    ++K +K++E    +G +P+A  Y  L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  C++G+VG  + L+ +ME  G     VTY +L+  L   G+L +    L  + ++ L
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PN   Y+ +++A  K R    A+ +L  + A G  P+ ++++ L++GLC+EGR +EA R
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
             R+       PN+ SY  L+   C+ G    A+ LL EM     +P +VT+  LI  L 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G+   AL V ++M   +  P A  YN +I+ LC +  +      +++M  +   P++ 
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 380 TYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            Y  L  + G  +   + EA  I + +  K        Y  +I   C+ G   +A + + 
Sbjct: 541 VYTTL--IDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMS 598

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M K G  PD +TY++LI G   +G I  AL +   M +   +P+V  +++L+ G CK  
Sbjct: 599 TMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLG 658

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
            TD +  +F  M  +G  PN  TYTIL+  +  +D++  +A   + + L Q
Sbjct: 659 DTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQ 709



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 216/465 (46%), Gaps = 22/465 (4%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + A + L++M + G  PD +  + L+  LC+  ++++A +++       + P+ SSYT L
Sbjct: 381 SQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSL 440

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  C +G V  A  L+ +M + G+  + VT+ +L+ GL + G ++++L   +++  + L
Sbjct: 441 IHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQL 500

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P+A  Y+ L+    K++ + AA  L+++++ +   P+   Y  L+ G  +    +EA +
Sbjct: 501 LPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARK 560

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F  +  KG  P+VV YN +++  C  G   EA E ++ M    R P   TY  LIG  A
Sbjct: 561 IFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYA 620

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G    AL +L +M+K R +P+  +Y+ +I   C  G  D        M  +   PN  
Sbjct: 621 KQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVI 680

Query: 380 TYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR-------------- 424
           TY  L   L    KV  A    + +   Q S        ++T LC               
Sbjct: 681 TYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTV 740

Query: 425 ----KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
               KG     F+ L         P +  Y+++I  LC+  ++ EAL++   M    YKP
Sbjct: 741 NLHGKGALLDIFRAL---VNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKP 797

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           D   F +LL G C   ++     +     ++ ++   + Y IL +
Sbjct: 798 DSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKILFD 842



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 185/409 (45%), Gaps = 60/409 (14%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M+ +GH PDVV    L++ L  A ++ +A+ V E M +  ++PDA+ Y  L++ LCK
Sbjct: 457 LVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCK 516

Query: 146 KGNVGYAMQLVEKM-----------------------------------EDYGYPTNTVT 170
           K  +  A  L+E+M                                   E  G   + V 
Sbjct: 517 KKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVG 576

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN++++G C  G +N++++ +  + + G +P+ FTY+ L+    K+  +  A+ LL D++
Sbjct: 577 YNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMM 636

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +  +PN+V+Y+ L+ G CK G T+ A   F  + S+G  PNV++Y IL+ SL  + +  
Sbjct: 637 KRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVV 696

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLA----------------YHGKTDHALKVLDEM 334
            A      M     SP   T + L+  L                  HGK    L +   +
Sbjct: 697 RAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGK-GALLDIFRAL 755

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
           V  R  P  ++YN II  LC    +   +   ++M ++  KP+  T+  L    C VGK 
Sbjct: 756 VNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKS 815

Query: 394 QEAFAIIQSLGNKQNSSPQEFYK-----YVITSLCRKGKTYQAFQLLYE 437
           +E   I+ +   +        YK     YV+ S+    + Y  FQL  E
Sbjct: 816 REWRTILPNEFQRDELEVASRYKILFDQYVVKSV--GCEVYSVFQLYLE 862



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 15/272 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  L++A    E M  KG  PDVV    ++   C+   M +A++ M  M   G IPD  
Sbjct: 551 RNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEF 610

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+    K+GN+  A+ L+  M       N V Y+SL+ G C LG+ + +      +
Sbjct: 611 TYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSM 670

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +GL PN  TY+ L+ + +K+  V  A    + ++     PN  + + L+TGLC    +
Sbjct: 671 ESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMAS 730

Query: 255 ---------------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
                             +  FR L +   +P   +YN ++ SLC+     EA +L  +M
Sbjct: 731 IISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKM 790

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
                 P   T+  L+      GK+     +L
Sbjct: 791 ANKGYKPDSATFLSLLYGFCSVGKSREWRTIL 822


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 214/402 (53%), Gaps = 7/402 (1%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +++  ++  LC  G    A++L+ +M       N VTYN+++ G C  G +  +L+ +  
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMRE 172

Query: 194 LIQKG-LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKE 251
           + ++G + P+ +TY+ L+    K   +  A+K+ D+++ KG   P+ V YN L+ G C  
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDV 232

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+ + A+++  D+  +G    V +YN+L+ +L M+ R  +A  +L EM     SP + TY
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTY 292

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI      G    AL+V +EM +   R +A +Y  +I     +G+V    +  +    
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +  +P+   YN L    C  G ++ A+ I+  +  K+       Y  ++   C  G+  +
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  L+ EMTK G  PD  +Y++LI G  M+G I++AL +   M +  + P +  +NAL+ 
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQ 472

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           GLCK R+ D +  + + M+ KG  P+++TY  L+EG+  +DE
Sbjct: 473 GLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 189/371 (50%), Gaps = 7/371 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           +P+ V    ++   C   +++ A++VM EM    GI PD  +Y  L++  CK G +  A+
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203

Query: 154 QLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           ++ ++M   G    + V YN+L+ G C +G L+ +LQ+ + ++Q+G+     TY+ L+ A
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
            + +     A  +L+++   G  P++ +YN+L+ G CKEG  ++A+  F ++  KG    
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            V+Y  L+     +G+ +E + L          P +V YN LI S    G  + A +++ 
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMA 383

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-- 390
           EM K R  P   +YN ++   C  G++D     +D+M  R  +P+  +YN L  + G   
Sbjct: 384 EMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTL--ISGYSM 441

Query: 391 -GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            G +++A  +   + +K  +     Y  +I  LC+  +   A  L+ EM   G TPD  T
Sbjct: 442 KGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDST 501

Query: 450 YSSLIRGLCME 460
           Y SLI GL  E
Sbjct: 502 YISLIEGLTTE 512



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 152/308 (49%), Gaps = 1/308 (0%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++ DA    + M++KG   P  V    L+   C   K+  A++  E MV  GI    ++Y
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L++ L        A  ++E+M+  G+  +  TYN L+ G C  GN  ++L+  + + Q
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQ 317

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+   A TY+ L+    ++  V    +L +  + KG +P++V YN L+   C  G  E 
Sbjct: 318 KGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMER 377

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++  K   P+ ++YN L+R  C+ GR +EA  L+ EM      P +V+YN LI 
Sbjct: 378 AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLIS 437

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             +  G    AL+V DEM+   F P+  +YN +I  LC   + D     + +M  +   P
Sbjct: 438 GYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497

Query: 377 NEGTYNGL 384
           ++ TY  L
Sbjct: 498 DDSTYISL 505



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 40/311 (12%)

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           ++N++L  LC  G+   A+   R +P     PN V+YN ++   C  GR + A E++ EM
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 300 -DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSEG 357
            + G  +P   TY  LI      G+ + A+KV DEM+ KG   PSA  YN +I   C  G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           K+D+ ++  + M  R          G+AM                            Y  
Sbjct: 234 KLDVALQYREDMVQR----------GIAMTVAT------------------------YNL 259

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++ +L    +   A+ +L EM K GF+PD +TY+ LI G C EG  ++ALE+F  M +  
Sbjct: 260 LMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKG 319

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            +     + +L+    +  +   +  +F + ++KG  P+   Y  L+       ++E + 
Sbjct: 320 VRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAY 379

Query: 538 EVLKELQLRQV 548
           E++ E++ +++
Sbjct: 380 EIMAEMEKKRI 390



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 140/279 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A    E MV +G    V     L++ L    +   A  V+E M  +G  PD  +Y 
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK+GN   A+++ E+M   G     VTY SL+      G + ++ +  +  ++K
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   Y+ L+ +      +  A +++ ++  K   P+ ++YN L+ G C  GR +EA
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++  +G +P++VSYN L+    M+G  ++A  +  EM     +PT++TYN LI  
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           L    + D A  ++ EMV     P  ++Y  +I  L +E
Sbjct: 474 LCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 125/243 (51%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D + +DA+  LE M   G  PDV     L+   CK    KKA++V E M   G+   A +
Sbjct: 267 DARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVT 326

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L+    +KG V    +L       G   + V YN+L+   C  G++ ++ + +  + 
Sbjct: 327 YTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEME 386

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K + P+  TY+ L+        +  A  L+D++  +G +P+LVSYN L++G   +G  +
Sbjct: 387 KKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIK 446

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+R   ++  KGF P +++YN L++ LC   + ++A  L+ EM     +P   TY  LI
Sbjct: 447 DALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLI 506

Query: 316 GSL 318
             L
Sbjct: 507 EGL 509


>gi|115482518|ref|NP_001064852.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|110289255|gb|AAP54273.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|110289256|gb|ABG66138.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113639461|dbj|BAF26766.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|215737151|dbj|BAG96080.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 599

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 245/536 (45%), Gaps = 76/536 (14%)

Query: 41  FIRVLASTQVTISPKDSVYTKPNRKPGNNND--------TRH-------------RDHKL 79
           F R  A ++  +SP   ++ KP RKP + N         ++H                KL
Sbjct: 98  FGRAAADSEKDVSP---IHAKP-RKPLDQNPEGMDVAGFSKHGGKCYADNLRRYCNSGKL 153

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
             A   ++ MV  G  P+      ++  L K  K  KA  V+E+MV SG +PD  S   L
Sbjct: 154 IQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNML 213

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN--LNQSLQFLDRLIQK 197
           +  LC+ G +  A+Q++E M   G   + +T+N+L+R  CM      ++++ F    ++ 
Sbjct: 214 IAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIR--CMFNQRMYDRAISFWKEQLRL 271

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   T + L++   K  G   A+++LD++  +G +P++V+YN L++  CK GR  +A
Sbjct: 272 GWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDA 331

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 L ++G EPN  +Y ILL +LC   RW+E  +LL +M+  +R P + TYNI I  
Sbjct: 332 KFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINY 391

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D A+ VL+ MV     P   + N ++  +  +                     
Sbjct: 392 FCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKK--------------------- 430

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                        G V+EA  I + +           Y  +I +L +K +  +A  L  E
Sbjct: 431 -------------GMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDE 477

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G +PD  TY SL+ G C + + +EAL++   M    ++     F  ++  LC+  +
Sbjct: 478 MLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGK 537

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIA-----------HQDELELSAEVLKE 542
            + + E+ ++M+ K  +P  +  + +V  +A           HQ  +E   E+LKE
Sbjct: 538 VEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLVE--CEILKE 591



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 175/375 (46%), Gaps = 3/375 (0%)

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           Y   +R  C  G L Q+   +D ++  G +P       ++    K    + A  +L+ ++
Sbjct: 140 YADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMV 199

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
             GG P+ +S N+L+  LC+ G+   A++   D+   G  P+ +++N L+R +  +  ++
Sbjct: 200 LSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYD 259

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            A     E       P  +T  +L+  +  +     AL+VLDE+     +P   +YN +I
Sbjct: 260 RAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALI 319

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNS 409
           +  C  G+++     L ++     +PN  TY  L   LC + +  E   +++ + N+ N 
Sbjct: 320 SASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDM-NQVNR 378

Query: 410 SPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
            P    Y   I   C+ G   QA  +L  M     +PD  T ++L+  +  +G++EEAL 
Sbjct: 379 DPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALG 438

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           I   + E  YK  +  +N L+  L K      ++ +F  M+  G  P++ TY  LV G  
Sbjct: 439 IARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFC 498

Query: 529 HQDELELSAEVLKEL 543
            +D  + + ++L ++
Sbjct: 499 KKDMADEALDLLNQM 513



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 69/158 (43%)

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK+ +A  +I  +         +    +I  L + GK  +A  +L  M   G  PD+
Sbjct: 148 CNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDT 207

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            + + LI  LC  G +  AL++   M      P    FN L+  +   R  D ++  ++ 
Sbjct: 208 ISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKE 267

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            +  G  P E T T+LV+ +      + + EVL EL L
Sbjct: 268 QLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSL 305


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 233/519 (44%), Gaps = 58/519 (11%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M  K  + D+   T L+   C  +K+  A+     +   G+ PD  ++  L++ LC +
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVE 162

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A+ L  +M +     N VT+ +L+ GLC  G + +++  LDR+++ GL P   TY
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222

Query: 207 SFLLEAAYKERGVHAAMKLL------DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
             +++   K     +A+ LL        II     PN+V Y+ ++  LCK+GR  +A   
Sbjct: 223 GTIVDGMCKIGDTVSALDLLRKMEEISHII-----PNVVIYSAIIDSLCKDGRHSDAQNL 277

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++  KG  P++ +YN ++   C  GRW +A +LL EM     SP +VTYN LI +   
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK   A ++ DEM+     P+  +Y+ +I   C + ++D        M  + C PN  T
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +N L    CG  ++ +   ++  +      +    Y  +I      G    A  LL EM 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNAL 488
             G  PD  T  +L+ GLC  G +++ALE+F VM++              +PDV  +N L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 489 LLGL-----------------------------------CKSRRTDLSLEVFQMMIEKGQ 513
           + GL                                   CK  R D + ++F  M  K  
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            PN  T+T L+ G      ++   E+  E+  R +V+ +
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 226/478 (47%), Gaps = 40/478 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RM+  G +P  +    ++  +CK      A+ ++  M   S IIP+ 
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNV 255

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ LCK G    A  L  +M++ G   +  TYNS++ G C  G  + + Q L  
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++++ + P+  TY+ L+ A  KE     A +L D+++ +G  PN ++Y+ ++ G CK+ R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F  + +KG  PN++++N L+   C   R ++  ELL EM          TYN 
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  + AL +L EM+     P   + + ++  LC  GK+              
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK------------- 482

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS-------PQ-EFYKYVITSLCRK 425
                                E F ++Q      ++S       P  + Y  +I+ L  +
Sbjct: 483 ------------------DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINE 524

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +A +L  EM   G  PD+ TYSS+I GLC +  ++EA ++F  M    + P+V  F
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             L+ G CK+ R D  LE+F  M  +G + N  TY  L+ G      +  + ++ +E+
Sbjct: 585 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 231/518 (44%), Gaps = 48/518 (9%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L DA      M+     P VV    L+  + +  +    I + + M    I  D 
Sbjct: 55  HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+T L+ C C    + +A+    K+   G   + VT+N+L+ GLC+   ++++L    +
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK------------------ 235
           + +    PN  T++ L+    +E  +  A+ LLD ++  G +                  
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGD 234

Query: 236 ------------------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                             PN+V Y+ ++  LCK+GR  +A   F ++  KG  P++ +YN
Sbjct: 235 TVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            ++   C  GRW +A +LL EM     SP +VTYN LI +    GK   A ++ DEM+  
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA 396
              P+  +Y+ +I   C + ++D        M  + C PN  T+N L    CG  ++ + 
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             ++  +      +    Y  +I      G    A  LL EM   G  PD  T  +L+ G
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDG 474

Query: 457 LCMEGLIEEALEIFVVMEEYD-----------YKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           LC  G +++ALE+F VM++              +PDV  +N L+ GL    +   + E++
Sbjct: 475 LCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 534

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + M  +G +P+  TY+ +++G+  Q  L+ + ++   +
Sbjct: 535 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 180/399 (45%), Gaps = 12/399 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D + +DA      M  KG  PD+    +++   C + +   A ++++ M+   I 
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N   K+G    A +L ++M   G   NT+TY+S++ G C    L+ +   
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  PN  T++ L++     + +   M+LL ++   G   +  +YN L+ G   
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS----- 305
            G    A+   +++ S G  P++V+ + LL  LC  G+ ++A E+   M    +      
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 306 ------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P + TYNILI  L   GK   A ++ +EM      P   +Y+ +I  LC + ++
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D   +  D M  +   PN  T+  L    C  G+V +   +   +G +   +    Y  +
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           I    + G    A  +  EM   G  PD+ T  +++ GL
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 182/407 (44%), Gaps = 37/407 (9%)

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L  G   +  L  ++     +++   +P+   +  L+    +       + L   +  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            + ++ S+ +L+   C   +   A+  F  +   G  P+VV++N LL  LC+E R  EA 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L  +M      P +VT+  L+  L   G+   A+ +LD M++   +P+  +Y  I+  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 354 CSEGK----VDLVVK---------------------CLD-----------QMFHRRCKPN 377
           C  G     +DL+ K                     C D           +M  +   P+
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN + +  C  G+  +A  ++Q +  ++ S     Y  +I +  ++GK ++A +L  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G  P++ TYSS+I G C +  ++ A  +F +M      P++  FN L+ G C ++
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R D  +E+   M E G + + TTY  L+ G     +L  + ++L+E+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 232/461 (50%), Gaps = 10/461 (2%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +MV +G   D      ++    K  ++++A +        G+  DA +Y+ ++  +CKK 
Sbjct: 250 KMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKP 309

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N    ++L+E+M++ G+  +  T+ S++      GN+ ++L+  + +I  G   N    +
Sbjct: 310 NSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVAT 369

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++    +  + +A+ L + I   G  PN V+Y+VL+ G C  G  E+A   +  +   
Sbjct: 370 SLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 429

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           G  P+V + N LLR       WEEA++L  E +D G     I TYNI++  L   GK D 
Sbjct: 430 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG--VANIFTYNIMMSWLCKGGKMDE 487

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A  +LD MV     P+  SYN +I   C +G +D+       M  R  KPN  TY+   +
Sbjct: 488 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS--IL 545

Query: 387 LCG---VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           + G    G  ++A  +   + +  N +P +F +  +I  LC+ G+  +A   L    + G
Sbjct: 546 IDGNFKKGDSEKALDLFDQMLS-LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           F P   TY+S++ G   EG I+ AL ++  M E+   P+V  + +L+ G CKS R DL+L
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 664

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +    M EKG   + T Y+ L++G   + ++E + ++  EL
Sbjct: 665 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 705



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 216/444 (48%), Gaps = 2/444 (0%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           +G K D    + ++  +CK       ++++E M   G +P  +++T ++     +GN+  
Sbjct: 289 RGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVE 348

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A++L E+M + G P N V   SL++G C  GNL+ +L   +++ + GL PN  TYS L+E
Sbjct: 349 ALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIE 408

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
                  +  A +L   +   G  P++ + N LL G  K    EEA + F +    G   
Sbjct: 409 GCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA- 467

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N+ +YNI++  LC  G+ +EA  LL  M      P +V+YN +I      G  D A  V 
Sbjct: 468 NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVF 527

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
            +M+    +P+  +Y+ +I     +G  +  +   DQM      P + T+N +   LC V
Sbjct: 528 SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 587

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G++ EA   +++   +        Y  ++    ++G    A  +  EM ++G +P+  TY
Sbjct: 588 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 647

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +SLI G C    I+ AL+    M E   + DV  ++AL+ G CK R  + + ++F  ++E
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707

Query: 511 KGQMPNETTYTILVEGIAHQDELE 534
            G  PN   Y  ++ G    + +E
Sbjct: 708 VGLSPNRIVYNSMISGFRDLNNME 731



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 230/481 (47%), Gaps = 3/481 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M++ G   ++V AT+L+   C    +  A+ +   +   G+ P+  +Y+ L+   C  
Sbjct: 354 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 413

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           GN+  A +L  +M+  G P +    NSL+RG        ++ +  D  +  G V N FTY
Sbjct: 414 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTY 472

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++    K   +  A  LLD+++ +G  PN+VSYN ++ G C++G  + A   F D+ +
Sbjct: 473 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 532

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +  +PNVV+Y+IL+     +G  E+A +L  +M   + +PT  T+N +I  L   G+   
Sbjct: 533 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 592

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A   L   ++  F PS  +YN I+     EG +D  +    +M      PN  TY  L  
Sbjct: 593 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 652

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C   ++  A      +  K        Y  +I   C++     A  L +E+ + G +P
Sbjct: 653 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSP 712

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +   Y+S+I G      +E AL  +  M       D+  +  L+ GL K  R   + +++
Sbjct: 713 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 772

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV-ERLVMQYDFE 564
             M+ KG +P+  T+ +LV G+ ++ +LE + ++L+E+  + +     +   L+  Y  E
Sbjct: 773 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 832

Query: 565 G 565
           G
Sbjct: 833 G 833



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 207/442 (46%), Gaps = 6/442 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M   G  P V    +LL    KA   ++A K+ +  V  G+  +  +Y  +++ LCK G
Sbjct: 425 QMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGG 483

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A  L++ M + G   N V+YN ++ G C  GN++ +      ++ + L PN  TYS
Sbjct: 484 KMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS 543

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++  +K+     A+ L D +++    P   ++N ++ GLCK G+  EA    ++   +
Sbjct: 544 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 603

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF P+ ++YN ++     EG  + A  +  EM     SP +VTY  LI       + D A
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 663

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           LK  DEM +        +Y+ +I   C    ++       ++      PN   YN  +M+
Sbjct: 664 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN--SMI 721

Query: 388 CG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
            G   +  ++ A    + + N +       Y  +I  L ++G+   A  L  EM   G  
Sbjct: 722 SGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIV 781

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  T+  L+ GLC +G +E A +I   M+  +  P V  +N L+ G  +      +  +
Sbjct: 782 PDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTL 841

Query: 505 FQMMIEKGQMPNETTYTILVEG 526
              M+++G +P++ TY IL+ G
Sbjct: 842 HDEMLDRGLVPDDVTYDILING 863



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 185/380 (48%), Gaps = 1/380 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A   L+ MV++G  P+VV   +++   C+   M  A  V   M++  + P+  +Y+
Sbjct: 484 KMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS 543

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++   KKG+   A+ L ++M          T+N+++ GLC +G ++++   L   +++
Sbjct: 544 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 603

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+  TY+ +++   KE  + +A+ +  ++   G  PN+V+Y  L+ G CK  R + A
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 663

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++   ++  KG E +V +Y+ L+   C     E A +L  E+     SP  + YN +I  
Sbjct: 664 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 723

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                  + AL    +M+  R      +Y  +I  L  EG++        +M  +   P+
Sbjct: 724 FRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPD 783

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T++ L   LC  G+++ A  I++ +  K  +     Y  +I    R+G   +AF L  
Sbjct: 784 IITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHD 843

Query: 437 EMTKYGFTPDSYTYSSLIRG 456
           EM   G  PD  TY  LI G
Sbjct: 844 EMLDRGLVPDDVTYDILING 863



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 129/241 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  ++ A      M   G  P+VV  T+L+   CK+N++  A+K  + M   G+  D +
Sbjct: 621 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 680

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++  CK+ ++  A  L  ++ + G   N + YNS++ G   L N+  +L +  ++
Sbjct: 681 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 740

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I   +  +  TY+ L++   KE  +  A  L  ++++KG  P++++++VL+ GLC +G+ 
Sbjct: 741 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 800

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A +   ++  K   P+V+ YN L+     EG  +EA  L  EM      P  VTY+IL
Sbjct: 801 ENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDIL 860

Query: 315 I 315
           I
Sbjct: 861 I 861



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/399 (20%), Positives = 183/399 (45%), Gaps = 8/399 (2%)

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V +   L+   + + +  +   +N L+        +  ++   + +I + ++P     + 
Sbjct: 171 VVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNI 230

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL A  +   +     L + ++ +G   +  + +V++    KEGR EEA  +FR+   +G
Sbjct: 231 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 290

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + +  +Y+I+++++C +       ELL EM      P+  T+  +I +    G    AL
Sbjct: 291 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEAL 350

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           ++ +EM+      +      ++   C++G +D  +   +++      PN+ TY+ L    
Sbjct: 351 RLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC 410

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR---KGKTYQAFQLLYEMTKYGFT 444
           C  G +++A  +   +  K N  P   +   + SL R   K   ++    L++       
Sbjct: 411 CNSGNIEKASELYTQM--KLNGIPPSVFN--VNSLLRGYLKAPLWEEASKLFDEAVDCGV 466

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            + +TY+ ++  LC  G ++EA  +   M      P+V ++N ++LG C+    D++  V
Sbjct: 467 ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 526

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           F  M+ +   PN  TY+IL++G   + + E + ++  ++
Sbjct: 527 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 565



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 4/183 (2%)

Query: 73  RHRD-HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           + RD     D F +L   +  G  P+ +   +++      N M+ A+   + M++  I  
Sbjct: 691 KRRDMESAQDLFFEL---LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 747

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  +YT L++ L K+G + +A  L  +M   G   + +T++ LV GLC  G L  + + L
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           + + +K + P+   Y+ L+   ++E  +  A  L D+++ +G  P+ V+Y++L+ G  K 
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 867

Query: 252 GRT 254
            R+
Sbjct: 868 DRS 870



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)

Query: 62  PNRKPGNNNDTRHRD-HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PNR   N+  +  RD + +  A +  ++M++     D+   T L+  L K  ++  A  +
Sbjct: 712 PNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDL 771

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
              M+S GI+PD  ++  LVN LC KG +  A +++E+M+      + + YN+L+ G   
Sbjct: 772 YMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFR 831

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            GNL ++    D ++ +GLVP+  TY  L+   +K
Sbjct: 832 EGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 866


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 204/394 (51%), Gaps = 4/394 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M+  G +PD+V  T+L+   C  N+M++A+ ++  MV  GI PD   YT +++ LCK
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G+V YA+ L ++ME+YG   + V Y SLV GLC  G    +   L  + ++ + P+  T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L++A  KE     A +L +++I     PN+ +Y  L+ G C EG  +EA + F  + 
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +KG  P+VV+Y  L+   C   + ++A ++  EM     +   +TY  LI      GK +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR---CKPNEGTYN 382
            A +V   MV     P+  +YN ++  LC  GKV   +   + M  R      PN  TYN
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC  GK+++A  + + +  ++       Y  +I  +C+ GK   A  L   +   
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           G  P+  TY+++I GL  EGL  EA  +F  M+E
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 228/471 (48%), Gaps = 13/471 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + N+A      MV     P ++  T LL  + K  K    I + + +   G+  D  +  
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+NC C+      A   + KM   G+  + VT+ SL+ G C+   + +++  ++++++ 
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   Y+ ++++  K   V+ A+ L D +   G +P++V Y  L+ GLC  GR  +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               R +  +  +P+V+++N L+ +   EG++ +A EL  EM     +P I TY  LI  
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 318 LAYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
               G  D A ++   M  KG F P   +Y  +I   C   KVD  +K   +M  +    
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 377 NEGTYNGLAMLCG-VGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           N  TY  L    G VGK    QE F+ + S G   N      Y  ++  LC  GK  +A 
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT---YNVLLHCLCYNGKVKKAL 407

Query: 433 QLLYEMTKY---GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            +  +M K    G  P+ +TY+ L+ GLC  G +E+AL +F  M + +    +  +  ++
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            G+CK+ +   ++ +F  +  KG  PN  TYT ++ G+  ++ L+  A VL
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL-FREGLKHEAHVL 517



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 181/403 (44%), Gaps = 34/403 (8%)

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KGN G A+     ++   +      Y  ++R        N++L     +++   +P+   
Sbjct: 15  KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ LL    K +     + L D +   G   +L + N+L+   C+  +   A  F   + 
Sbjct: 75  FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             GFEP++V++  L+   C+  R EEA  ++ +M      P +V Y  +I SL  +G  +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           +AL + D+M     RP    Y  ++  LC+ G+       L  M  R+ KP+  T+N L 
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL- 253

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
                                            I +  ++GK   A +L  EM +    P
Sbjct: 254 ---------------------------------IDAFVKEGKFLDAEELYNEMIRMSIAP 280

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           + +TY+SLI G CMEG ++EA ++F +ME     PDV  + +L+ G CK ++ D ++++F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             M +KG   N  TYT L++G     +  ++ EV   +  R V
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 206/440 (46%), Gaps = 4/440 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           +  +A+ +   MV S  +P    +T L+N + K       + L + ++  G   +  T N
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            L+   C       +  FL ++++ G  P+  T++ L+        +  AM +++ ++  
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KP++V Y  ++  LCK G    A+  F  + + G  P+VV Y  L+  LC  GRW +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
           + LL  M      P ++T+N LI +    GK   A ++ +EM++    P+  +Y  +I  
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
            C EG VD   +    M  + C P+   Y  L    C   KV +A  I   +  K  +  
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I    + GK   A ++   M   G  P+  TY+ L+  LC  G +++AL IF 
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411

Query: 472 VMEEYDYK---PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
            M++ +     P++  +N LL GLC + + + +L VF+ M ++       TYTI+++G+ 
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471

Query: 529 HQDELELSAEVLKELQLRQV 548
              +++ +  +   L  + V
Sbjct: 472 KAGKVKNAVNLFCSLPSKGV 491



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 7/316 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++  +N A    ++M + G +PDVV  T+L+  LC + + + A  ++  M    I 
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  L++   K+G    A +L  +M       N  TY SL+ G CM G ++++ Q 
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  P+   Y+ L+    K + V  AMK+  ++  KG   N ++Y  L+ G  +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA-----EMDGGDRS 305
            G+   A   F  + S+G  PN+ +YN+LL  LC  G+ ++A  +       EMDG   +
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG--VA 422

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P I TYN+L+  L Y+GK + AL V ++M K        +Y  II  +C  GKV   V  
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482

Query: 366 LDQMFHRRCKPNEGTY 381
              +  +  KPN  TY
Sbjct: 483 FCSLPSKGVKPNVVTY 498


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 217/446 (48%), Gaps = 4/446 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTYLVNCL 143
           L RM   G  P+ V  + +L  LC  +  ++A+ +++MM   G    PD  +Y+ +++  
Sbjct: 216 LHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGF 275

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
             +G  G A  L  +M   G   + VTYN ++  LC    ++++   L ++   G  P+ 
Sbjct: 276 FNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDT 335

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TYS ++        +  A K+  ++  +G  PN+V+ N  L  LCK GR++EA  FF  
Sbjct: 336 VTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDS 395

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + +KG +P++ SY  LL     EG + +   L   M     +     + ILI + A  G 
Sbjct: 396 MTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGM 455

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+ +  EM +    P   +Y+ +I+     G++   ++  +QM  R  +PN   Y+ 
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSS 515

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
           +    C  G + +A  ++  + NK    P   F+  VI SLC+ G+   A  +    T  
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDI 575

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P   T++SLI G C+ G +++A +I   ME    +PD+  +N LL G  K+ R +  
Sbjct: 576 GERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDG 635

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGI 527
           L +F+ M  KG  PN  TY I++ G+
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGL 661



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 238/522 (45%), Gaps = 41/522 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
              M  +G KPDVV    ++  LCKA  M KA  V+  M + G  PD  +Y+ +++    
Sbjct: 288 FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYAT 347

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A ++  +M+  G   N VT NS +  LC  G   ++ +F D +  KG  P+ F+
Sbjct: 348 LGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFS 407

Query: 206 YSFLLEA----------------------------------AYKERG-VHAAMKLLDDII 230
           Y  LL                                    AY +RG V  AM +  ++ 
Sbjct: 408 YCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQ 467

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +G  P++V+Y+ +++   + GR  +A+  F  + ++G +PN   Y+ +++  CM G   
Sbjct: 468 QQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLV 527

Query: 291 EANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           +A EL++EM + G   P IV ++ +I SL   G+   A  + D       RP   ++N +
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSL 587

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNK 406
           I   C  GK+D   K LD M     +P+  TYN L  L G    G++ +   + + +  K
Sbjct: 588 IDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTL--LDGYFKNGRINDGLTLFREMQRK 645

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  ++  L R G+T  A +  +EM + G T     Y  ++ GLC     +EA
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           + +F  +   + K  +   N ++  + K +R + + E+F  +   G +PNE+TY +++  
Sbjct: 706 IILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIIN 765

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGIEV 568
           +     +E +  +   ++   +V  S +   +++   E  E+
Sbjct: 766 LLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEI 807



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 214/457 (46%), Gaps = 42/457 (9%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P   +Y  L++C C+       + L   +   G   + +T N+L++ LC      +++ 
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 190 -FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG--KPNLVSYNVLLT 246
             L R+ + G VPNA +YS +L+A         A+ LL  +  +GG   P++V+Y+ ++ 
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           G   EG T +A   F ++  +G +P+VV+YN+++ +LC     ++A  +L +M      P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
             VTY+ +I   A  G+   A K+  EM K    P+  + N  +A LC  G+     +  
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF 393

Query: 367 DQMFHRRCKPN-------------EGTY------------NGLAMLCGV----------- 390
           D M  +  KP+             EG +            NG+A  C V           
Sbjct: 394 DSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKR 453

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           G V +A  I   +  +Q  SP    Y  VI++  R G+   A +   +M   G  P++  
Sbjct: 454 GMVDDAMLIFTEM-QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAV 512

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDY-KPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           YSS+I+G CM G + +A E+   M      +PD+  F++++  LCK  R   + ++F + 
Sbjct: 513 YSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLA 572

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            + G+ P   T+  L++G     +++ + ++L  +++
Sbjct: 573 TDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV 609



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 169/367 (46%), Gaps = 8/367 (2%)

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           VP   TY+ L++   + R     + L   I+  G K + ++ N LL  LC   RTEEA+ 
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 260 -FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIG 316
                +   G  PN VSY+I+L++LC     + A +LL  M   GG  SP +V Y+ +I 
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G+T  A  +  EM +   +P   +YN II  LC    +D     L QM     +P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 377 NEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +  TY+   M+ G   +G+++EA  + + +  +            + SLC+ G++ +A +
Sbjct: 334 DTVTYS--CMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE 391

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
               MT  G  PD ++Y +L+ G   EG   + + +F  M+      +   F  L+    
Sbjct: 392 FFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYA 451

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K    D ++ +F  M ++G  P+  TY+ ++   +    L  + E   ++  R +   +A
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTA 511

Query: 554 VERLVMQ 560
           V   ++Q
Sbjct: 512 VYSSIIQ 518



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 36/324 (11%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII- 130
           T  R  +L DA  +  +MV++G +P+    ++++   C    + KA +++  M++ GI  
Sbjct: 484 TFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPR 543

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD   ++ ++N LCK G V  A  + +   D G     +T+NSL+ G C++G ++++ + 
Sbjct: 544 PDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI 603

Query: 191 LD-----------------------------------RLIQKGLVPNAFTYSFLLEAAYK 215
           LD                                    + +KG+ PN  TY  +L   ++
Sbjct: 604 LDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFR 663

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                AA K   ++I  G    +  Y ++L GLC+    +EAI  F+ L +   + ++  
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITI 723

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
            N ++ ++    R EEA EL A +      P   TY ++I +L   G  + A  +   M 
Sbjct: 724 LNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSME 783

Query: 336 KGRFRPSAASYNPIIARLCSEGKV 359
           K    P +   N II  L  +G++
Sbjct: 784 KSGIVPGSRLLNRIIRMLLEKGEI 807



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 127/292 (43%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D ++ DA    +     G +P V+   +L+   C   KM KA K+++ M   G+ PD  
Sbjct: 558 KDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIV 617

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++   K G +   + L  +M+  G   NTVTY  ++ GL   G    + +    +
Sbjct: 618 TYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ G       Y  +L    +      A+ L   +     K ++   N ++  + K  R 
Sbjct: 678 IESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRK 737

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA   F  + + G  PN  +Y +++ +L  +G  E+AN + + M+     P     N +
Sbjct: 738 EEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRI 797

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           I  L   G+   A   L ++   R    A++ + +++    +GK    +K L
Sbjct: 798 IRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/226 (20%), Positives = 94/226 (41%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ ++ND       M  KG KP+ V    +L  L +A +   A K    M+ SG  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
              S Y  ++  LC+      A+ L +K+       +    N+++  +  +    ++ + 
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   GL+PN  TY  ++    K+ GV  A  +   +   G  P     N ++  L +
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE 803

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +G   +A  +   +  K       + +++L     +G+++E  +LL
Sbjct: 804 KGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 232/461 (50%), Gaps = 10/461 (2%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +MV +G   D      ++    K  ++++A +        G+  DA +Y+ ++  +CKK 
Sbjct: 210 KMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKP 269

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N    ++L+E+M++ G+  +  T+ S++      GN+ ++L+  + +I  G   N    +
Sbjct: 270 NSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVAT 329

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++    +  + +A+ L + I   G  PN V+Y+VL+ G C  G  E+A   +  +   
Sbjct: 330 SLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 389

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           G  P+V + N LLR       WEEA++L  E +D G     I TYNI++  L   GK D 
Sbjct: 390 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG--VANIFTYNIMMSWLCKGGKMDE 447

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A  +LD MV     P+  SYN +I   C +G +D+       M  R  KPN  TY+   +
Sbjct: 448 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS--IL 505

Query: 387 LCG---VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           + G    G  ++A  +   + +  N +P +F +  +I  LC+ G+  +A   L    + G
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLS-LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           F P   TY+S++ G   EG I+ AL ++  M E+   P+V  + +L+ G CKS R DL+L
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 624

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +    M EKG   + T Y+ L++G   + ++E + ++  EL
Sbjct: 625 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 665



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 216/444 (48%), Gaps = 2/444 (0%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           +G K D    + ++  +CK       ++++E M   G +P  +++T ++     +GN+  
Sbjct: 249 RGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVE 308

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A++L E+M + G P N V   SL++G C  GNL+ +L   +++ + GL PN  TYS L+E
Sbjct: 309 ALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIE 368

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
                  +  A +L   +   G  P++ + N LL G  K    EEA + F +    G   
Sbjct: 369 GCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-A 427

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N+ +YNI++  LC  G+ +EA  LL  M      P +V+YN +I      G  D A  V 
Sbjct: 428 NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVF 487

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
            +M+    +P+  +Y+ +I     +G  +  +   DQM      P + T+N +   LC V
Sbjct: 488 SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 547

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G++ EA   +++   +        Y  ++    ++G    A  +  EM ++G +P+  TY
Sbjct: 548 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 607

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +SLI G C    I+ AL+    M E   + DV  ++AL+ G CK R  + + ++F  ++E
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667

Query: 511 KGQMPNETTYTILVEGIAHQDELE 534
            G  PN   Y  ++ G    + +E
Sbjct: 668 VGLSPNRIVYNSMISGFRDLNNME 691



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 230/481 (47%), Gaps = 3/481 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M++ G   ++V AT+L+   C    +  A+ +   +   G+ P+  +Y+ L+   C  
Sbjct: 314 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 373

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           GN+  A +L  +M+  G P +    NSL+RG        ++ +  D  +  G V N FTY
Sbjct: 374 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTY 432

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++    K   +  A  LLD+++ +G  PN+VSYN ++ G C++G  + A   F D+ +
Sbjct: 433 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 492

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +  +PNVV+Y+IL+     +G  E+A +L  +M   + +PT  T+N +I  L   G+   
Sbjct: 493 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 552

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A   L   ++  F PS  +YN I+     EG +D  +    +M      PN  TY  L  
Sbjct: 553 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 612

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C   ++  A      +  K        Y  +I   C++     A  L +E+ + G +P
Sbjct: 613 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSP 672

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +   Y+S+I G      +E AL  +  M       D+  +  L+ GL K  R   + +++
Sbjct: 673 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 732

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV-ERLVMQYDFE 564
             M+ KG +P+  T+ +LV G+ ++ +LE + ++L+E+  + +     +   L+  Y  E
Sbjct: 733 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 792

Query: 565 G 565
           G
Sbjct: 793 G 793



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 207/442 (46%), Gaps = 6/442 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M   G  P V    +LL    KA   ++A K+ +  V  G+  +  +Y  +++ LCK G
Sbjct: 385 QMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGG 443

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A  L++ M + G   N V+YN ++ G C  GN++ +      ++ + L PN  TYS
Sbjct: 444 KMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS 503

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++  +K+     A+ L D +++    P   ++N ++ GLCK G+  EA    ++   +
Sbjct: 504 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 563

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF P+ ++YN ++     EG  + A  +  EM     SP +VTY  LI       + D A
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 623

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           LK  DEM +        +Y+ +I   C    ++       ++      PN   YN  +M+
Sbjct: 624 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYN--SMI 681

Query: 388 CG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
            G   +  ++ A    + + N +       Y  +I  L ++G+   A  L  EM   G  
Sbjct: 682 SGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIV 741

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  T+  L+ GLC +G +E A +I   M+  +  P V  +N L+ G  +      +  +
Sbjct: 742 PDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTL 801

Query: 505 FQMMIEKGQMPNETTYTILVEG 526
              M+++G +P++ TY IL+ G
Sbjct: 802 HDEMLDRGLVPDDVTYDILING 823



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 185/380 (48%), Gaps = 1/380 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A   L+ MV++G  P+VV   +++   C+   M  A  V   M++  + P+  +Y+
Sbjct: 444 KMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS 503

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++   KKG+   A+ L ++M          T+N+++ GLC +G ++++   L   +++
Sbjct: 504 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 563

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+  TY+ +++   KE  + +A+ +  ++   G  PN+V+Y  L+ G CK  R + A
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 623

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++   ++  KG E +V +Y+ L+   C     E A +L  E+     SP  + YN +I  
Sbjct: 624 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 683

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                  + AL    +M+  R      +Y  +I  L  EG++        +M  +   P+
Sbjct: 684 FRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPD 743

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T++ L   LC  G+++ A  I++ +  K  +     Y  +I    R+G   +AF L  
Sbjct: 744 IITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHD 803

Query: 437 EMTKYGFTPDSYTYSSLIRG 456
           EM   G  PD  TY  LI G
Sbjct: 804 EMLDRGLVPDDVTYDILING 823



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 129/241 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  ++ A      M   G  P+VV  T+L+   CK+N++  A+K  + M   G+  D +
Sbjct: 581 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 640

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++  CK+ ++  A  L  ++ + G   N + YNS++ G   L N+  +L +  ++
Sbjct: 641 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 700

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I   +  +  TY+ L++   KE  +  A  L  ++++KG  P++++++VL+ GLC +G+ 
Sbjct: 701 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 760

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A +   ++  K   P+V+ YN L+     EG  +EA  L  EM      P  VTY+IL
Sbjct: 761 ENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDIL 820

Query: 315 I 315
           I
Sbjct: 821 I 821



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/399 (20%), Positives = 183/399 (45%), Gaps = 8/399 (2%)

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V +   L+   + + +  +   +N L+        +  ++   + +I + ++P     + 
Sbjct: 131 VVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNI 190

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL A  +   +     L + ++ +G   +  + +V++    KEGR EEA  +FR+   +G
Sbjct: 191 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 250

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + +  +Y+I+++++C +       ELL EM      P+  T+  +I +    G    AL
Sbjct: 251 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEAL 310

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           ++ +EM+      +      ++   C++G +D  +   +++      PN+ TY+ L    
Sbjct: 311 RLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC 370

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR---KGKTYQAFQLLYEMTKYGFT 444
           C  G +++A  +   +  K N  P   +   + SL R   K   ++    L++       
Sbjct: 371 CNSGNIEKASELYTQM--KLNGIPPSVFN--VNSLLRGYLKAPLWEEASKLFDEAVDCGV 426

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            + +TY+ ++  LC  G ++EA  +   M      P+V ++N ++LG C+    D++  V
Sbjct: 427 ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 486

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           F  M+ +   PN  TY+IL++G   + + E + ++  ++
Sbjct: 487 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 525



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 91/174 (52%), Gaps = 3/174 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F +L   +  G  P+ +   +++      N M+ A+   + M++  I  D  +YT L+
Sbjct: 660 DLFFEL---LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 716

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           + L K+G + +A  L  +M   G   + +T++ LV GLC  G L  + + L+ + +K + 
Sbjct: 717 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 776

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           P+   Y+ L+   ++E  +  A  L D+++ +G  P+ V+Y++L+ G  K  R+
Sbjct: 777 PSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 830



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 1/155 (0%)

Query: 62  PNRKPGNNNDTRHRD-HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PNR   N+  +  RD + +  A +  ++M++     D+   T L+  L K  ++  A  +
Sbjct: 672 PNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDL 731

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
              M+S GI+PD  ++  LVN LC KG +  A +++E+M+      + + YN+L+ G   
Sbjct: 732 YMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFR 791

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            GNL ++    D ++ +GLVP+  TY  L+   +K
Sbjct: 792 EGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 214/432 (49%), Gaps = 11/432 (2%)

Query: 104 LLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           LL  LC A ++ +A  ++   M   G   +  SY  L+  LC +     A++L+  M D 
Sbjct: 134 LLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADD 193

Query: 163 G---YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
           G   +  N VTY +++ GLC    ++++      +I KG+ PN  TY+ L+         
Sbjct: 194 GDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKW 253

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
              +++L ++   G +P+ V Y VLL  LCK GR  EA   F  L  KG +P+V  Y IL
Sbjct: 254 KEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGIL 313

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           L     EG   E +  L  M     SP    +NI+  + A     D A+ + D+M +   
Sbjct: 314 LHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWL 373

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA-- 396
            P   +Y  +I  LC  G+VD  V   +QM +    P+   ++ L   LC V K ++A  
Sbjct: 374 SPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEK 433

Query: 397 -FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
            F  +   G + N++   F+  ++ +LCR+G+  +A +L+  M +    PD  +Y++L+ 
Sbjct: 434 LFFEVLDQGIRLNAA---FFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVD 490

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G C+ G I+EA ++  VM     KPD   +N LL G CK+RR D +  +F+ M+ KG  P
Sbjct: 491 GHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP 550

Query: 516 NETTYTILVEGI 527
              TY  ++ G+
Sbjct: 551 GVVTYNTILHGL 562



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 230/461 (49%), Gaps = 3/461 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M+ KG +P+    T L++      K K+ +++++ M + G+ PD   Y  L++ LCK
Sbjct: 225 FQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCK 284

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A  + + +   G   +   Y  L+ G    G L++   FLD +++ G+ P+   
Sbjct: 285 NGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHI 344

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ +  A  K+  +  AM + D +  +   P +V+Y  L+  LCK GR ++A+  F  + 
Sbjct: 345 FNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMI 404

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKT 324
           ++G  P++  ++ L+  LC   +WE+A +L  E +D G R      +NIL+ +L   G+ 
Sbjct: 405 NEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIR-LNAAFFNILMCNLCREGRV 463

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A +++D M++   RP   SYN ++   C  G++D   K LD M     KP+E TYN L
Sbjct: 464 MEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTL 523

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C   ++ +A+++ + +  K  +     Y  ++  L + G+  +A +L   M     
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRR 583

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D YTY+ ++ GLC    ++EA ++F  +   D + D+   N ++  L K  R + +++
Sbjct: 584 KCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMD 643

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +F  +   G +P+  TY ++ E +  +  LE   E+   ++
Sbjct: 644 LFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAME 684



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 169/333 (50%), Gaps = 1/333 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA L+  +M+++G  PD+   ++L+Y LC  +K +KA K+   ++  GI  +A+ + 
Sbjct: 392 RVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC++G V  A +L++ M       + ++YN+LV G C+ G ++++ + LD ++  
Sbjct: 452 ILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI 511

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+ FTY+ LL    K R +  A  L  +++ KG  P +V+YN +L GL + GR  EA
Sbjct: 512 GLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEA 571

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              + ++ +   + ++ +Y I+L  LC     +EA ++   +   D    I T NI+IG+
Sbjct: 572 KELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGA 631

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A+ +   +      P   +Y  I   L  EG ++ + +    M      PN
Sbjct: 632 LLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPN 691

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
               N L   L   G +  A   +  L  K  S
Sbjct: 692 SRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFS 724



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 138/277 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ +A   ++ M+    +PDV+    L+   C   ++ +A K++++MVS G+ PD  
Sbjct: 459 REGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEF 518

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK   +  A  L  +M   G     VTYN+++ GL  +G   ++ +    +
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNM 578

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I      + +TY+ +L    +   V  A K+   + +K  + ++ + N+++  L K GR 
Sbjct: 579 INNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRK 638

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+  F  + + G  P+V +Y ++  +L  EG  EE +EL + M+    +P     N L
Sbjct: 639 EDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNAL 698

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           +  L + G    A   L ++ +  F   A++ + +I+
Sbjct: 699 VRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLIS 735



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/408 (22%), Positives = 153/408 (37%), Gaps = 82/408 (20%)

Query: 218 GVHAAMKLLDDIIAKGG-----------------------------------------KP 236
           G+  A+KL D+++                                              P
Sbjct: 31  GLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAP 90

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE-PNVVSYNILLRSLCMEGRWEEANE- 294
           +  +Y +L+   C+ GR +     F  +   G+   N V +  LL+ LC   R +EA + 
Sbjct: 91  SSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDI 150

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV---KGRFRPSAASYNPIIA 351
           LL  M     +  +++YNIL+  L    + + AL+++  M     G   P+  +Y  +I 
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVID 210

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
            LC    VD        M  +  +PN  TY  L       GK +E   ++Q +       
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQP 270

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG--------- 461
               Y  ++  LC+ G+  +A  +   + + G  P    Y  L+ G   EG         
Sbjct: 271 DCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFL 330

Query: 462 --------------------------LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
                                     +I+EA+ IF  M +    P V N+ AL+  LCK 
Sbjct: 331 DLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKL 390

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            R D ++  F  MI +G  P+   ++ LV G+   D+ E + ++  E+
Sbjct: 391 GRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEV 438



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 18/252 (7%)

Query: 325 DHALKVLDEMVKGRFRPSAASYN---PIIARLCSEGKVDLVVKCLDQMFHRRCK----PN 377
           D ALK+ DEM+      S  ++N    +++R       +LVV   ++M  R C     P+
Sbjct: 33  DDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMI-RECSVKVAPS 91

Query: 378 EGTYNGL-AMLCGVGKVQEAFA---IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             TY  L    C +G+++  FA   +I   G   N++    +  ++  LC   +  +A  
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTV--IFGQLLKGLCDAKRVDEATD 149

Query: 434 -LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE---YDYKPDVDNFNALL 489
            LL  M ++G T +  +Y+ L++GLC E   EEALE+  +M +     + P+V  +  ++
Sbjct: 150 ILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVI 209

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            GLCK++  D +  VFQ MI+KG  PN  TYT L+ G     + +   ++L+E+    + 
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ 269

Query: 550 SESAVERLVMQY 561
            +  +  +++ Y
Sbjct: 270 PDCVIYAVLLDY 281


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 230/486 (47%), Gaps = 36/486 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +++K+++A   L  M  KG  P VV    L+   CK   +  A +++++M S+   P+  
Sbjct: 346 KENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTR 405

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+  LCKK  V  AM L+ KM +     + +TYNSL+ G C + +L  + + L  +
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GLVP+ +TYS  ++   KE  V  A  L D + AKG K N V Y  L+ G CK G+ 
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A      + +    PN  +YN+L+  LC E + +EA+ L+A+M      PT+VTY IL
Sbjct: 526 DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG +   G  DHALKV + MV   ++P   +Y   +    S+G ++ V   + +M     
Sbjct: 586 IGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645

Query: 375 KPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            P+  TY    +G A L   G    AF  ++ + +            +I +L  + +  +
Sbjct: 646 LPDLVTYTVLIDGYARL---GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702

Query: 431 -----------------------------AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                                        A +L  +M ++G T D   Y +LI G C + 
Sbjct: 703 TRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 762

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +EEA  +   M+E    P  D +N+LL   CK      ++ +   M+E G +P   +Y 
Sbjct: 763 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 822

Query: 522 ILVEGI 527
           +LV G+
Sbjct: 823 LLVCGL 828



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 227/461 (49%), Gaps = 1/461 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  +++A+     M  KG + + V  TNL++ LC+A ++ +A+K+   M      P   
Sbjct: 241 RNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVR 300

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+  L   G    A+ L  +M++ G   N  TY  L+ GLC    ++++ + L  +
Sbjct: 301 TYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM 360

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KGL+P+  TY+ L++   KE  +  A ++LD + +    PN  +YN L+ GLCK+ + 
Sbjct: 361 SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKV 420

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+     +  +   P++++YN L+   C     E A  LL+ M+     P   TY++ 
Sbjct: 421 HKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVF 480

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L   G+ + A  + D +     + +   Y  +I   C  GK+D+    L++M +  C
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN L   LC   K++EA +++  +           Y  +I  + + G    A +
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M   G+ PD  TY++ +     +G++EE  ++   M E    PD+  +  L+ G  
Sbjct: 601 VFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYA 660

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +   T  + +  + M++ G  P+    +IL++ ++H++ ++
Sbjct: 661 RLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 220/450 (48%), Gaps = 3/450 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A L   ++V  G  PD    T+L+   C+   +  A +V  +M   G   +  SYT L+
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 141 NCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           + LC+ G +  A++L   M ED   PT   TY  L+  L   G   ++L   + + +KG 
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPT-VRTYTVLIYALSGSGRKVEALNLFNEMKEKGC 330

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PN  TY+ L++   KE  +  A K+L ++  KG  P++V+YN L+ G CKEG  ++A  
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFE 390

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               + S    PN  +YN L+  LC + +  +A  LL +M     SP+++TYN LI    
Sbjct: 391 ILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQC 450

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                + A ++L  M +    P   +Y+  I  LC EG+V+      D +  +  K NE 
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            Y  L    C VGK+  A+++++ + N         Y  +I  LC++ K  +A  L+ +M
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  P   TY+ LI  +  +G  + AL++F  M    Y+PDV  + A L         
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   +V   M E+G +P+  TYT+L++G A
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYA 660



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 211/456 (46%), Gaps = 36/456 (7%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           ++++ I P+  ++  +VN  CK GNV  A     K+   G   +T TY SL+ G C    
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           ++ + +    + QKG   N  +Y+ L+    +   ++ A+KL  D+      P + +Y V
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+  L   GR  EA+  F ++  KG EPNV +Y +L+  LC E + +EA ++L+EM    
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P++VTYN LI      G  D A ++LD M      P+  +YN +I  LC + KV   +
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 364 KCLDQMFHRRCKPNEGTYNGLA------------------------------------ML 387
             L++M  R+  P+  TYN L                                      L
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G+V+EA  +  S+  K   + +  Y  +I   C+ GK   A+ LL  M      P+S
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNS 544

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           YTY+ LI GLC E  ++EA  +   M     KP V  +  L+  + K    D +L+VF  
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           M+  G  P+  TYT  +     Q  LE   +V+ ++
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 207/440 (47%), Gaps = 19/440 (4%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++ ++ +A    + + +KG K + V  T L+   CK  K+  A  ++E M++   +
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P++ +Y  L+  LCK+  +  A  LV KM   G     VTY  L+  +   G  + +L+ 
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK----GGKPNLVSYNVLLT 246
            + ++  G  P+  TY+  L A + +      ++ +DD+IAK    G  P+LV+Y VL+ 
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQ----GMLEEVDDVIAKMNEEGILPDLVTYTVLID 657

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           G  + G T  A  F + +   G +P++   +IL+++L  E R +E    +    G D   
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEI----GIDSVS 713

Query: 307 TIVTYNI--LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            + + +I  +  +L Y    + ALK+ ++MV+       + Y  +IA  C + +++    
Sbjct: 714 NVNSVDIADVWKTLEY----EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQG 769

Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            +  M  R   P+E  YN L    C +G   EA  ++ ++         E YK ++  L 
Sbjct: 770 LVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLY 829

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            +G   +A  + + +   G+  D   +  LI GL    L++E  E+  +MEE D     D
Sbjct: 830 IEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQAD 889

Query: 484 NFNALLLGLCKSRRTDLSLE 503
              A L+ L  +  T  +LE
Sbjct: 890 IACAALMRLAAANSTKGALE 909



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 135/322 (41%), Gaps = 39/322 (12%)

Query: 258 IRFFRDLPSKG---FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +  FR + + G   F+P +  YN +L SL      +E   +  E+     SP I T+N +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSA------------------------------- 343
           +      G    A     ++V+    P                                 
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 344 ----ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
                SY  +I  LC  G+++  +K    M    C P   TY  L   L G G+  EA  
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +   +  K        Y  +I  LC++ K  +A ++L EM++ G  P   TY++LI G C
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            EG+I++A EI  +ME     P+   +N L+ GLCK R+   ++ +   M+E+   P+  
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440

Query: 519 TYTILVEGIAHQDELELSAEVL 540
           TY  L+ G    ++LE +  +L
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLL 462



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 3/214 (1%)

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA 396
           +F+P+   YN I+  L     +D +     ++ + +  PN  T+N +    C +G V EA
Sbjct: 154 KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213

Query: 397 FAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
             +  S   +    P  F Y  +I   CR      A+++   M + G   +  +Y++LI 
Sbjct: 214 -ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIH 272

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GLC  G I EAL++F  M E +  P V  +  L+  L  S R   +L +F  M EKG  P
Sbjct: 273 GLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           N  TYT+L++G+  +++++ + ++L E+  + ++
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 229/475 (48%), Gaps = 21/475 (4%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           V  +NL   LC A K +KA  ++  M+S G IPD S+Y+ ++  LC    V  A  L E+
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+      +  TY  L+   C +G L Q+ ++ D +++ G  PN  TY+ L+ A  K R 
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF------RDLPSKGF--- 269
           + +A +L + ++++G  PN+V+Y  L+ G CK G+ E+A + +       D+P       
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 270 -------EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
                  +PN+ +Y  L+  LC   + +EA +LL  M      P  + Y+ LI      G
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A  V  +M +  + P+  +Y+ +I RL  + ++DL +K L +M    C PN   Y 
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +   LC VGK  EA+ ++  +  K        Y  +I    + GK  +  +L+ +M   
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P+  TY  LI   C  GL+++A ++   M++  +   +  +  ++ G   +R   +S
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIIS 863

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           L +   + E   +P    Y IL++       LEL+ E+ K +      S SA ++
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMS--SCTSYSAADK 916



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 235/503 (46%), Gaps = 35/503 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   A+  +  M+SKG  PD    + ++  LC A+K+  A  + E M S+ ++PD  +YT
Sbjct: 460 KFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYT 519

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK G +  A +  ++M   G   N VTY +L+        ++ + +  + ++ +
Sbjct: 520 ILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE 579

Query: 198 GLVPNAFTYSFLLEAAYK----ERG--VHAAMKLLDDI--------IAKGG--KPNLVSY 241
           G +PN  TY+ L++   K    E+   ++A M+   DI        I  G    PN+ +Y
Sbjct: 580 GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             L+ GLCK  + +EA      +  +G EPN + Y+ L+   C  G+ +EA  +  +M  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P + TY+ LI  L    + D ALKVL  M++    P+   Y  +I  LC  GK D 
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
             + +  M  + C PN  TY   AM+ G    GKV +   +++ +G K  +     Y+ +
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYT--AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME-----GLIEEALEIFVVM 473
           I   C  G    A QLL EM +  +      Y  +I G   E     GL++E  E   V 
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAV- 876

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM--IEKGQMPNETTYTILVEGIAHQD 531
                 P +  +  L+   CK+ R +L+LE+ + M         ++  Y+ L+E ++   
Sbjct: 877 ------PIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 532 ELELSAEVLKELQLRQVVSESAV 554
           +++ + E+  ++  R  + E ++
Sbjct: 931 KVDKAFELYADMIKRGGIPELSI 953



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 228/506 (45%), Gaps = 37/506 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM S    P+VV    LL    +  ++ +  +++ MM++ G  P    +  L++  C+
Sbjct: 322 LSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCR 381

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD----------RLI 195
            G+  YA +L++KM D G     V YN L+ G+C     N+ L  LD           ++
Sbjct: 382 SGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG----NEKLPSLDVLELAEKAYGEML 437

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              +V N    S L            A  ++ ++++KG  P+  +Y+ ++  LC   + +
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A   F ++ S    P+V +Y IL+ S C  G  ++A +   EM     +P +VTY  LI
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK----------------- 358
            +     K   A ++ + M+     P+  +Y  +I   C  G+                 
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 359 --VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
             VD+  K  D        PN  TY  L   LC   KV+EA  ++  +  +        Y
Sbjct: 618 PDVDMYFKIDDGNIR---DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I   C+ GK  +A  +  +M++ G+ P+ YTYSSLI  L  +  ++ AL++   M E
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P+V  +  ++ GLCK  +TD +  +  MM EKG  PN  TYT +++G     +++ 
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 536 SAEVLKELQLRQVVSESAVERLVMQY 561
             E+++++  +         R+++ +
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINH 820



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 223/549 (40%), Gaps = 100/549 (18%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   N A  +L R+   G+KP  +    L+    +A+++  A  V   M  SG   D  
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +    V+ LCK G    A+ L+EK E   +  +TV Y  ++ GLC      +++ FL R+
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEKEE---FKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TY  LL    ++R +    ++L  +I +G  P+   +N L+   C+ G  
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL---------------------------------- 280
             A +  + +   G +P  V YNIL+                                  
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNK 445

Query: 281 -------RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
                  R LC  G++E+A  ++ EM      P   TY+ +IG L    K D+A  + +E
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--------- 384
           M      P   +Y  +I   C  G +    K  D+M    C PN  TY  L         
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 385 ---------AML------------------CGVGKVQEAFAIIQSL-------------- 403
                     ML                  C  G++++A  I   +              
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 404 ---GNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
              GN ++  P  F Y  ++  LC+  K  +A  LL  M+  G  P+   Y +LI G C 
Sbjct: 626 IDDGNIRD--PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G ++EA  +F  M E  Y P+V  +++L+  L K +R DL+L+V   M+E    PN   
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 520 YTILVEGIA 528
           YT +++G+ 
Sbjct: 744 YTEMIDGLC 752



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 200/402 (49%), Gaps = 21/402 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A    E M+S+G  P+VV  T L+   CK+ +++KA ++   M  +  IPD  
Sbjct: 562 KARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVD 621

Query: 135 SY--------------TY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
            Y              TY  LV+ LCK   V  A  L++ M   G   N + Y++L+ G 
Sbjct: 622 MYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGF 681

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C +G L+++     ++ ++G  PN +TYS L++  +K++ +  A+K+L  ++     PN+
Sbjct: 682 CKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNV 741

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           + Y  ++ GLCK G+T+EA R    +  KG  PNVV+Y  ++      G+ ++  EL+ +
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQ 801

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M     +P  VTY +LI      G  D A ++LDEM +  +    A Y  +I     E  
Sbjct: 802 MGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFI 861

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN--KQNSSPQEFY 415
           + L +  LD++      P    Y  L    C  G+++ A  + + + +    +++ ++ Y
Sbjct: 862 ISLGL--LDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLY 919

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
             +I SL    K  +AF+L  +M K G  P+   +  L++GL
Sbjct: 920 SSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGL 961



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 215/471 (45%), Gaps = 28/471 (5%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM-------MVSSGIIPDAS 134
           A+  L++M   G +P  V    L+  +C   K+  ++ V+E+       M+ + ++ +  
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L  CLC  G    A  ++ +M   G+  +T TY+ ++  LC    ++ +    + +
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               +VP+ FTY+ L+++  K   +  A K  D+++  G  PN+V+Y  L+    K  + 
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F  + S+G  PNVV+Y  L+   C  G+ E+A ++ A M G    P +  Y   
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY--- 623

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                         K+ D  ++    P+  +Y  ++  LC   KV      LD M    C
Sbjct: 624 -------------FKIDDGNIRD---PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +PN   Y+ L    C VGK+ EA  +   +  +        Y  +I  L +  +   A +
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  M +    P+   Y+ +I GLC  G  +EA  +  +MEE    P+V  + A++ G  
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K+ + D  LE+ + M  KG  PN  TY +L+        L+ + ++L E++
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 10/413 (2%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C+ G    A++ + +++D GY  + +TYN+LVR       L+ +      +   G
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              + +T    +    K      A+ L++    +  K + V Y  +++GLC+    EEA+
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAM 319

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F   + S    PNVV+Y ILL     + +      +L+ M      P+   +N LI + 
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMFHR 372
              G   +A K+L +M     +P    YN +I  +C   K+      +L  K   +M   
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
               N+   + LA  LCG GK ++A++II+ + +K        Y  VI  LC   K   A
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F L  EM      PD +TY+ LI   C  GL+++A + F  M      P+V  + AL+  
Sbjct: 500 FLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA 559

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             K+R+   + E+F+MM+ +G +PN  TYT L++G     ++E + ++   ++
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 8/258 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L RM+     P+V+  T ++  LCK  K  +A ++M MM   G  
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT +++   K G V   ++L+ +M   G   N VTY  L+   C  G L+ + Q 
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD + Q     +   Y  ++E   +E  +  ++ LLD+I      P + +Y +L+   CK
Sbjct: 834 LDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCK 891

Query: 251 EGRTEEAIRFFRDLPS----KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            GR E A+   + + S       + ++  Y+ L+ SL +  + ++A EL A+M      P
Sbjct: 892 AGRLELALELHKXMSSCTSYSAADKDL--YSSLIESLSLASKVDKAFELYADMIKRGGIP 949

Query: 307 TIVTYNILIGSLAYHGKT 324
            +  +  L+  L    +T
Sbjct: 950 ELSIFFYLVKGLIRINRT 967



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 145/362 (40%), Gaps = 63/362 (17%)

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y+ LL  L   G      +F R++  +  E      N+L+R  C  G W  A E L  + 
Sbjct: 165 YHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLK 224

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV--------------------KGRFR 340
                P+ +TYN L+       + D A  V  EM                      GR+R
Sbjct: 225 DLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWR 284

Query: 341 PSAA------------SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            + A             Y  +I+ LC     +  +  L +M    C PN  TY    +LC
Sbjct: 285 EALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR--ILLC 342

Query: 389 G------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           G      +G+ +   +++ + G   +   +  +  +I + CR G    A++LL +M   G
Sbjct: 343 GCLRKRQLGRCKRILSMMITEGCYPS---RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCG 399

Query: 443 FTPDSYTYSSLIRGLC-------------MEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             P    Y+ LI G+C              E    E L+  VV+ +        N + L 
Sbjct: 400 CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKV-------NVSNLA 452

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             LC + + + +  + + M+ KG +P+ +TY+ ++  + +  +++ +  + +E++   VV
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512

Query: 550 SE 551
            +
Sbjct: 513 PD 514


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 230/480 (47%), Gaps = 17/480 (3%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI----------KVMEMMVS 126
           HKL+ +     ++   G +PDVV    LL+ LC  +++ +A+           + + MV 
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVE 214

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
            G+ P   ++  L+N LC +G V  A  LV KM   G   + VTY ++V G+C +G+   
Sbjct: 215 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 274

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +L  L ++ +  + P+   YS +++   K+     A  L  +++ KG  PN+ +YN ++ 
Sbjct: 275 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 334

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           G C  GR  +A R  RD+  +   P+V+++N L+ +   EG+  EA +L  EM      P
Sbjct: 335 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 394

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
             VTYN +I     H + D A  + D M      P   ++N II   C   +VD  ++ L
Sbjct: 395 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLL 450

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            ++  R    N  TYN L    C V  +  A  + Q + +            ++   C  
Sbjct: 451 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 510

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            K  +A +L   +       D+  Y+ +I G+C    ++EA ++F  +  +  +PDV  +
Sbjct: 511 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 570

Query: 486 NALLLGLC-KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           N ++ G C KS  +D ++ +F  M + G  P+ +TY  L+ G     E++ S E++ E++
Sbjct: 571 NVMISGFCGKSAISDANV-LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 629



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 227/485 (46%), Gaps = 13/485 (2%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L+DA    + MV        V    ++    + N+   AI +   M    I  + 
Sbjct: 82  HYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNI 141

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL----- 188
            S+  L+ C C    + +++    K+   G+  + VT+N+L+ GLC+   ++++L     
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201

Query: 189 -----QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
                   D++++ GL P   T++ L+     E  V  A  L++ ++ KG   ++V+Y  
Sbjct: 202 MVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 261

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++ G+CK G T+ A+     +     +P+VV Y+ ++  LC +G   +A  L +EM    
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
            +P + TYN +I      G+   A ++L +M++    P   ++N +I+    EGK+    
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 381

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
           K  D+M HR   P+  TYN  +M+ G  K    F   + + +   S     +  +I   C
Sbjct: 382 KLCDEMLHRCIFPDTVTYN--SMIYGFCK-HNRFDDAKHMFDLMASPDVVTFNTIIDVYC 438

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R  +  +  QLL E+++ G   ++ TY++LI G C    +  A ++F  M  +   PD  
Sbjct: 439 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 498

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             N LL G C++ + + +LE+F+++       +   Y I++ G+    +++ + ++   L
Sbjct: 499 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 558

Query: 544 QLRQV 548
            +  V
Sbjct: 559 PIHGV 563



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 188/397 (47%), Gaps = 5/397 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           + +MV KG   DVV    ++  +CK    K A+ ++  M  + I PD   Y+ +++ LCK
Sbjct: 244 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 303

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G+   A  L  +M + G   N  TYN ++ G C  G  + + + L  +I++ + P+  T
Sbjct: 304 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 363

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+ A+ KE  +  A KL D+++ +   P+ V+YN ++ G CK  R ++A   F  + 
Sbjct: 364 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 423

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S    P+VV++N ++   C   R +E  +LL E+          TYN LI         +
Sbjct: 424 S----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 479

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +  EM+     P   + N ++   C   K++  ++  + +   +   +   YN + 
Sbjct: 480 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 539

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             +C   KV EA+ +  SL         + Y  +I+  C K     A  L ++M   G  
Sbjct: 540 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 599

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           PD+ TY++LIRG    G I++++E+   M    +  D
Sbjct: 600 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 636



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 203/489 (41%), Gaps = 77/489 (15%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +  AI   + MV S     A     ++    +      A+ L  KME    P N  ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L++  C    L+ SL    +L + G                                   
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGF---------------------------------- 172

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAI----------RFFRDLPSKGFEPNVVSYNILLRSL 283
            +P++V++N LL GLC E R  EA+            F  +   G  P V+++N L+  L
Sbjct: 173 -QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGL 231

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C+EGR  EA  L+ +M G      +VTY  ++  +   G T  AL +L +M +   +P  
Sbjct: 232 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 291

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
             Y+ II RLC +G          +M  +   PN  TYN +    C  G+  +A  +++ 
Sbjct: 292 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 351

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  ++ +     +  +I++  ++GK ++A +L  EM      PD+ TY+S+I G C    
Sbjct: 352 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 411

Query: 463 IEEALEIFVVMEEYD---YKPDVD----------------------------NFNALLLG 491
            ++A  +F +M   D   +   +D                             +N L+ G
Sbjct: 412 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 471

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            C+    + + ++FQ MI  G  P+  T  IL+ G    ++LE + E+ + +Q+ ++  +
Sbjct: 472 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 531

Query: 552 SAVERLVMQ 560
           +    +++ 
Sbjct: 532 TVAYNIIIH 540



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 144/286 (50%), Gaps = 5/286 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL +A    + M+ +   PD V   +++Y  CK N+   A  + ++M S    PD  
Sbjct: 373 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 428

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  +++  C+   V   MQL+ ++   G   NT TYN+L+ G C + NLN +      +
Sbjct: 429 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 488

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I  G+ P+  T + LL    +   +  A++L + I       + V+YN+++ G+CK  + 
Sbjct: 489 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 548

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F  LP  G EP+V +YN+++   C +    +AN L  +M      P   TYN L
Sbjct: 549 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 608

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           I      G+ D +++++ EM    F   A +   ++A L ++G++D
Sbjct: 609 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLD 653



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 151/321 (47%), Gaps = 4/321 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   L  M+ +   PDV+    L+    K  K+ +A K+ + M+   I PD  +Y 
Sbjct: 341 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 400

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++   CK      A  + + M       + VT+N+++   C    +++ +Q L  + ++
Sbjct: 401 SMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 456

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLV N  TY+ L+    +   ++AA  L  ++I+ G  P+ ++ N+LL G C+  + EEA
Sbjct: 457 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 516

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +     + + V+YNI++  +C   + +EA +L   +      P + TYN++I  
Sbjct: 517 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 576

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                    A  +  +M      P  ++YN +I      G++D  ++ + +M       +
Sbjct: 577 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 636

Query: 378 EGTYNGLAMLCGVGKVQEAFA 398
             T   +A L   G++ ++F+
Sbjct: 637 AFTIKMVADLITDGRLDKSFS 657



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 156/360 (43%), Gaps = 6/360 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D   +DA      M+ KG  P+V     ++   C   +   A +++  M+   I PD  
Sbjct: 303 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 362

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++   K+G +  A +L ++M       +TVTYNS++ G C     + +    D +
Sbjct: 363 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 422

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                 P+  T++ +++   + + V   M+LL +I  +G   N  +YN L+ G C+    
Sbjct: 423 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 478

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F+++ S G  P+ ++ NILL   C   + EEA EL   +         V YNI+
Sbjct: 479 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 538

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +    K D A  +   +      P   +YN +I+  C +  +        +M     
Sbjct: 539 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 598

Query: 375 KPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+  TYN L   C   G++ ++  +I  +      S   F   ++  L   G+  ++F 
Sbjct: 599 EPDNSTYNTLIRGCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVADLITDGRLDKSFS 657



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 154/381 (40%), Gaps = 37/381 (9%)

Query: 193 RLIQKGL--VPNAFTYSFLLEAAYKERGVHAAMKLLDDII-----AKGGKP--NLVSYNV 243
           R+ +KG   +P+    +F  E    + G H   K LDD I         +P    V  N 
Sbjct: 53  RVAEKGTKSLPSLTQVTFEGEELKLKSGSHY-FKSLDDAIDFFDYMVRSRPFYTAVDCNK 111

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++    +  R + AI  +R +  +    N+ S+NIL++  C   +   +     ++    
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VT+N L+  L    +   AL +   MV+                    G +    
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVE-------------------TGSL---- 208

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
              DQM      P   T+N L   LC  G+V EA A++  +  K        Y  ++  +
Sbjct: 209 --FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ G T  A  LL +M +    PD   YS++I  LC +G   +A  +F  M E    P+V
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N ++ G C   R   +  + + MIE+   P+  T+  L+     + +L   AE L +
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL-FEAEKLCD 385

Query: 543 LQLRQVVSESAVERLVMQYDF 563
             L + +    V    M Y F
Sbjct: 386 EMLHRCIFPDTVTYNSMIYGF 406


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 218/478 (45%), Gaps = 34/478 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DAF     MV     P +V  T LL       + +  I   + M   GI  D  S+T
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++C C+   + +A+ ++ KM   GY  + VT+ SL+ G C++  +  +   +  +++ 
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN   Y+ L++   K   ++ A++LL+++  KG   ++V+YN LLTGLC  GR  +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R  RD+  +   P+VV++  L+     +G  +EA EL  EM      P  VTYN +I  
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  HG+   A K  D M      P+  +YN +I+  C    VD  +K   +M       +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  I   C+ GK   A  +   
Sbjct: 351 IFTYNTL----------------------------------IHGYCQVGKLRVALDIFCW 376

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M     TPD  T+  L+ GLC+ G IE AL  F  M E +    +  +N ++ GLCK+ +
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            + + E+F  +  +G  P+  TYTI++ G+        + E+++ ++   ++ +   E
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAE 494



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 216/465 (46%), Gaps = 5/465 (1%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K +DAF     M+     P +V  T +L  + K NK    I +   M + GI  D  S+T
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++C C+   +  A+ L+ KM   G+  + VT  SL+ G C      +++  +D +   
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            G VPN   Y+ ++    K R ++ A+++   +  KG + + V+YN L++GL   GR  +A
Sbjct: 704  GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             R  RD+  +  +PNV+ +  L+ +   EG   EA  L  EM      P + TYN LI  
Sbjct: 764  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               HG    A  + D MV     P   +YN +I   C   +V+  +K   +M ++    +
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 378  EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              TYN L    C  GK+  A  +   + +   S     Y  ++  LC  GK  +A  ++ 
Sbjct: 884  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 437  EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            ++ K     D  TY+ +I+GLC    ++EA  +F  +     KPD   +  ++ GLC+  
Sbjct: 944  DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003

Query: 497  RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
                + ++ + M E G MP+E  Y    +         LSAE++K
Sbjct: 1004 LQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLSAELIK 1044



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 193/401 (48%), Gaps = 34/401 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+ A   L +M+  G++P +V   +LL+  C  N++  A  ++ +MV SG  P+  
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++ LCK G +  A++L+ +ME  G   + VTYN+L+ GLC  G  + + + L  +
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++ + P+  T++ L++   K+  +  A +L  ++I     PN V+YN ++ GLC  GR 
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A + F  + SKG  PNVV+YN L+   C     +E  +L   M     +  I TYN L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK   AL +   MV  R  P   ++  ++  LC  G+++  +   D M     
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM----- 412

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           + +E  Y G+                              Y  +I  LC+  K  +A++L
Sbjct: 413 RESE-KYIGIVA----------------------------YNIMIHGLCKADKVEKAWEL 443

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
              +   G  PD+ TY+ +I GLC  G   EA E+   M+E
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 2/289 (0%)

Query: 69   NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG 128
            N   ++RD  LN+A      M  KG + D V    L+  L  + +   A +++  MV   
Sbjct: 717  NGLCKNRD--LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK 774

Query: 129  IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
            I P+   +T L++   K+GN+  A  L ++M       N  TYNSL+ G C+ G L  + 
Sbjct: 775  IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 834

Query: 189  QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
               D ++ KG  P+  TY+ L+    K + V   MKL  ++  +G   +  +YN L+ G 
Sbjct: 835  YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 894

Query: 249  CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            C+ G+   A + F  +   G  P++V+YNILL  LC  G+ E+A  ++ ++   +    I
Sbjct: 895  CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 954

Query: 309  VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
            +TYNI+I  L    K   A  +   + +   +P A +Y  +I+ LC +G
Sbjct: 955  ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 174/379 (45%), Gaps = 3/379 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            + +      ++Q   +P+   ++ +L    K       + L   +   G   +L S+ +
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C+  R   A+     +   GF P++V+   LL   C   R++EA  L+  MDG  
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +V YN +I  L  +   ++AL+V   M K   R  A +YN +I+ L + G+     
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
           + L  M  R+  PN   +  L       G + EA  + + +  +++  P  F Y  +I  
Sbjct: 765 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM-IRRSVVPNVFTYNSLING 823

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            C  G    A  +   M   G  PD  TY++LI G C    +E+ +++F  M       D
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              +N L+ G C++ + +++ +VF  M++ G  P+  TY IL++ + +  ++E +  +++
Sbjct: 884 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 542 ELQLRQVVSESAVERLVMQ 560
           +LQ  ++  +     +++Q
Sbjct: 944 DLQKSEMDVDIITYNIIIQ 962



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 122/242 (50%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            DT  ++  L +A    + M+ +   P+V    +L+   C    +  A  + ++MVS G  
Sbjct: 787  DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 846

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            PD  +Y  L+   CK   V   M+L  +M   G   +  TYN+L+ G C  G LN + + 
Sbjct: 847  PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             +R++  G+ P+  TY+ LL+       +  A+ +++D+       ++++YN+++ GLC+
Sbjct: 907  FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              + +EA   FR L  KG +P+ ++Y  ++  LC +G   EA++L   M      P+   
Sbjct: 967  TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 1026

Query: 311  YN 312
            Y+
Sbjct: 1027 YD 1028



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 36/344 (10%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L TG     R E+A   F ++      P++V +  LL +     R+E       +M+   
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDE------------------------------ 333
            S  + ++ ILI       +   AL VL +                              
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 334 -----MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
                MVK  + P+   YN +I  LC  G++++ ++ L++M  +    +  TYN L   L
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G+  +A  +++ +  +  +     +  +I    ++G   +A +L  EM +    P++
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+S+I GLCM G + +A + F +M      P+V  +N L+ G CK R  D  +++FQ 
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           M  +G   +  TY  L+ G     +L ++ ++   +  R+V  +
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 232/475 (48%), Gaps = 1/475 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  ++N++   L  MVS+G   D+V  T ++  L K  K+++A  V+   +S  I 
Sbjct: 337 DSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNIT 396

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT LV+  C+ GN+  A Q++ +ME+     N VT++S++ GL   G + ++  +
Sbjct: 397 PNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGY 456

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + ++   G+ PN  TY  L++  +K +G  AA+ +  D++ +G + N    + L+ GL K
Sbjct: 457 MRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRK 516

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  EEA   F+D+  +G   + V+Y  L+  L   G    A ++  E+   + SP  V 
Sbjct: 517 NGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVV 576

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN+ I  L   GK   A   L EM      P  A+YN +I+  C EG     +K L++M 
Sbjct: 577 YNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMK 636

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
               KPN  TY  L + L   G V++A  ++  + +   +     Y+ V+ +       Y
Sbjct: 637 WSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPY 696

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
              ++   M   G   D   Y++L+  LC  G+  +A  +   M      PD   FNAL+
Sbjct: 697 VILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALI 756

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           LG CKS   D +   +  M+ +G  PN  T+  L+ G+     +  +  V+ E++
Sbjct: 757 LGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMK 811



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 224/502 (44%), Gaps = 36/502 (7%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ERM + G +P VV  T L+ + CK  ++++A  + E MV SG++PD  + + LV+ LC+ 
Sbjct: 248 ERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRD 307

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G    A  L  +M+  G   N VTY + +  L  +  +N+SL  L  ++ +G+  +   Y
Sbjct: 308 GRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMY 367

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + +++   KE  +  A  +L   ++    PN V+Y VL+   C+ G  + A +    +  
Sbjct: 368 TTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEE 427

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           K   PNVV+++ +L  L   G   +A   + +M     +P +VTY  LI         + 
Sbjct: 428 KSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEA 487

Query: 327 ALKVLDEMV--------------------KGRFRPSAA---------------SYNPIIA 351
           AL V  +M+                     G    + A               +Y  ++ 
Sbjct: 488 ALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMD 547

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSS 410
            L   G +   +K   ++  R   P+   YN  +  LC +GK  EA + ++ + N     
Sbjct: 548 GLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEP 607

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
            Q  Y  +I++ CR+G T +A +LL EM      P+  TY++L+ GL   G++E+A  + 
Sbjct: 608 DQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLL 667

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M    + P    +  +L     SR   + LEV ++M+  G   + T Y  LV  +   
Sbjct: 668 NEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCH 727

Query: 531 DELELSAEVLKELQLRQVVSES 552
                +  VL E+  R +  ++
Sbjct: 728 GMTRKATIVLDEMLGRGIAPDT 749



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 228/515 (44%), Gaps = 39/515 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R   ++ A   L +M  K   P+VV  +++L  L K   + KA   M  M  SGI 
Sbjct: 407 DAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIA 466

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++   K      A+ +   M   G   N    +SLV GL   GN+ ++   
Sbjct: 467 PNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEAL 526

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + ++GL+ +   Y+ L++  +K   + AA+K+  +++ +   P+ V YNV +  LC+
Sbjct: 527 FKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCR 586

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA  F +++ + G EP+  +YN ++ + C EG   +A +LL EM      P ++T
Sbjct: 587 LGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLIT 646

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY------------------------ 346
           Y  L+  L   G  + A  +L+EM    F P+  +Y                        
Sbjct: 647 YTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMM 706

Query: 347 -----------NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
                      N ++  LC  G        LD+M  R   P+  T+N L +  C    + 
Sbjct: 707 GAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLD 766

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            AFA    + ++  S     +  ++  L   G+  +A  ++ EM K G  P++ TY  L+
Sbjct: 767 NAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILV 826

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G   +    EAL ++  M    + P    +N+L+    K+   + + E+F  M  +G +
Sbjct: 827 TGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVL 886

Query: 515 PNETTYTILVEG---IAHQDELELSAEVLKELQLR 546
              +TY IL+ G   + +  E+ +  + +KEL  +
Sbjct: 887 HTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFK 921



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 204/434 (47%), Gaps = 16/434 (3%)

Query: 99  VQATNLLYD-----LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           V+A N + D     L K   +++A  + + M   G++ D  +Y  L++ L K GN+  A+
Sbjct: 500 VEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAAL 559

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           ++ +++ +     + V YN  +  LC LG  +++  FL  +   GL P+  TY+ ++ A 
Sbjct: 560 KVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQ 619

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            +E     A+KLL+++     KPNL++Y  L+ GL + G  E+A     ++ S GF P  
Sbjct: 620 CREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTP 679

Query: 274 VSYNILLRSLCMEGRWE----EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           ++Y  +L++ C   R      E +EL   M G      I  YN L+  L  HG T  A  
Sbjct: 680 LTYRRVLQA-CSGSRSPYVILEVHEL---MMGAGLHADITVYNTLVHVLCCHGMTRKATI 735

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLC 388
           VLDEM+     P   ++N +I   C    +D       QM H+   PN  T+N L   L 
Sbjct: 736 VLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLE 795

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
             G++ EA  +I  +  K    P    Y  ++T   +K    +A +L  EM   GF P +
Sbjct: 796 SAGRIGEADTVICEM-KKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKA 854

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+SLI      G++ +A E+F  M+          ++ LL G  K R       + + 
Sbjct: 855 STYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKD 914

Query: 508 MIEKGQMPNETTYT 521
           M E G  P++ T +
Sbjct: 915 MKELGFKPSKGTIS 928



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 212/483 (43%), Gaps = 7/483 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A   +ERM ++G   DVV    L+     +     A +V E M + G+ P   ++T L+ 
Sbjct: 208 ALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIG 267

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK   +  A  L E M   G   + VT ++LV GLC  G  +++      + + G+ P
Sbjct: 268 EYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAP 327

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY   +++  K + V+ ++ LL +++++G   +LV Y  ++  L KEG+ EEA    
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           R   S    PN V+Y +L+ + C  G  + A ++L +M+    SP +VT++ ++  L   
Sbjct: 388 RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKR 447

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN---- 377
           G    A   + +M      P+  +Y  +I         +  +     M H   + N    
Sbjct: 448 GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIV 507

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
           +   NGL      G ++EA A+ + +G +        Y  ++  L + G    A ++  E
Sbjct: 508 DSLVNGLRK---NGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQE 564

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           + +   +PD+  Y+  I  LC  G   EA      M     +PD   +N ++   C+   
Sbjct: 565 LMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGN 624

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
           T  +L++   M      PN  TYT LV G+     +E +  +L E+            R 
Sbjct: 625 TSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRR 684

Query: 558 VMQ 560
           V+Q
Sbjct: 685 VLQ 687



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 208/462 (45%), Gaps = 3/462 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS--SYTYLVNCL 143
           L  M  +G   D V  +  L  L +   + +A  + EM+V    I       +  L++  
Sbjct: 140 LSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGY 199

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK  ++  A+ +VE+M   G   + V YN+LV G    G+ + + +  +R+   G+ P+ 
Sbjct: 200 CKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSV 259

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            T++ L+    K + +  A  L + ++  G  P++V+ + L+ GLC++GR  EA   FR+
Sbjct: 260 VTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFRE 319

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   G  PN V+Y   + SL    R  E+  LL EM     +  +V Y  ++  L   GK
Sbjct: 320 MDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGK 379

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            + A  VL   +     P+  +Y  ++   C  G +D   + L QM  +   PN  T++ 
Sbjct: 380 IEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSS 439

Query: 384 -LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L  L   G + +A   ++ + +   +     Y  +I    +      A  +  +M   G
Sbjct: 440 ILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEG 499

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
              +++   SL+ GL   G IEEA  +F  M E     D  N+  L+ GL K+     +L
Sbjct: 500 VEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAAL 559

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +V Q ++E+   P+   Y + +  +    +   +   LKE++
Sbjct: 560 KVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMR 601



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 217/500 (43%), Gaps = 44/500 (8%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP----DASSYTYLVNCLCKKGNVGYA 152
           D +   +++   C  + ++ A+ ++    SSG  P    D  SY   +  L ++G+   A
Sbjct: 79  DPLTLNSIILSYCSLHALRPALSLLR--SSSGPQPQVAADTVSYNIFLAGLSEQGHGRLA 136

Query: 153 MQLVEKMEDYGYPTNTVT-------------------------------------YNSLV 175
             ++ +M   G P + VT                                     +N+L+
Sbjct: 137 PPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALI 196

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
            G C + ++  +L  ++R+  +GL  +   Y+ L+   +      AA ++ + + A G +
Sbjct: 197 DGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVE 256

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P++V++  L+   CK  R EEA   +  +   G  P+VV+ + L+  LC +GR+ EA  L
Sbjct: 257 PSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYAL 316

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             EMD    +P  VTY   I SLA   + + +L +L EMV          Y  ++ RL  
Sbjct: 317 FREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGK 376

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
           EGK++     L         PN  TY  L    C  G +  A  ++  +  K  S     
Sbjct: 377 EGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVT 436

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  ++  L ++G   +A   + +M   G  P+  TY +LI G       E AL+++  M 
Sbjct: 437 FSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDML 496

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               + +    ++L+ GL K+   + +  +F+ M E+G + +   Y  L++G+     + 
Sbjct: 497 HEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMP 556

Query: 535 LSAEVLKELQLRQVVSESAV 554
            + +V +EL  R +  ++ V
Sbjct: 557 AALKVGQELMERNLSPDAVV 576



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 175/384 (45%), Gaps = 7/384 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + ++ +   PD V     +  LC+  K  +A   ++ M ++G+ PD ++Y  +++  C++
Sbjct: 563 QELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCRE 622

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           GN   A++L+ +M+      N +TY +LV GL   G + ++   L+ +   G  P   TY
Sbjct: 623 GNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTY 682

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             +L+A    R  +  +++ + ++  G   ++  YN L+  LC  G T +A     ++  
Sbjct: 683 RRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLG 742

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  P+ +++N L+   C     + A    A+M     SP I T+N L+G L   G+   
Sbjct: 743 RGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGE 802

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-- 384
           A  V+ EM K    P+  +Y+ ++     +      ++   +M  +   P   TYN L  
Sbjct: 803 ADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLIS 862

Query: 385 --AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
             A    + + +E F+ ++  G    SS    Y  ++    +     +   LL +M + G
Sbjct: 863 DFAKAGMMNQAKELFSEMKRRGVLHTSST---YDILLNGWSKLRNGTEVRILLKDMKELG 919

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEA 466
           F P   T SS+ R     G+  EA
Sbjct: 920 FKPSKGTISSMSRAFSKPGMTWEA 943



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 167/419 (39%), Gaps = 40/419 (9%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQF---------------------------------- 190
           P + +T NS++   C L  L  +L                                    
Sbjct: 77  PGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLA 136

Query: 191 ---LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL--VSYNVLL 245
              L  + ++G+  +  T S  L    +   V  A  L + ++   G   L  V +N L+
Sbjct: 137 PPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALI 196

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G CK      A+     + ++G   +VV YN L+      G  + A E+   M      
Sbjct: 197 DGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVE 256

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P++VT+  LIG      + + A  + + MV+    P   + + ++  LC +G+       
Sbjct: 257 PSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYAL 316

Query: 366 LDQMFHRRCKPNEGTY-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
             +M      PN  TY   +  L  V +V E+  ++  + ++  +     Y  V+  L +
Sbjct: 317 FREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGK 376

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +GK  +A  +L        TP+  TY+ L+   C  G I+ A ++ + MEE    P+V  
Sbjct: 377 EGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVT 436

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           F+++L GL K      +    + M + G  PN  TY  L++G       E + +V +++
Sbjct: 437 FSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDM 495



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 127/260 (48%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M S G  P  +    +L     +      ++V E+M+ +G+  D + Y  LV+ LC 
Sbjct: 667 LNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCC 726

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A  ++++M   G   +T+T+N+L+ G C   +L+ +     +++ +GL PN  T
Sbjct: 727 HGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIAT 786

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ LL        +  A  ++ ++   G +PN ++Y++L+TG  K+    EA+R + ++ 
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 846

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           SKGF P   +YN L+      G   +A EL +EM       T  TY+IL+   +      
Sbjct: 847 SKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGT 906

Query: 326 HALKVLDEMVKGRFRPSAAS 345
               +L +M +  F+PS  +
Sbjct: 907 EVRILLKDMKELGFKPSKGT 926



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 176/384 (45%), Gaps = 18/384 (4%)

Query: 25  FYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFL 84
           F + +  L  FS  K F++ + +T   + P  + Y             + R+   + A  
Sbjct: 580 FINCLCRLGKFSEAKSFLKEMRNTG--LEPDQATYN-------TMISAQCREGNTSKALK 630

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
            L  M     KP+++  T L+  L +A  ++KA  ++  M S+G  P   +Y  ++   C
Sbjct: 631 LLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA-C 689

Query: 145 KKGNVGYA-MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
                 Y  +++ E M   G   +   YN+LV  LC  G   ++   LD ++ +G+ P+ 
Sbjct: 690 SGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDT 749

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            T++ L+    K   +  A      ++ +G  PN+ ++N LL GL   GR  EA     +
Sbjct: 750 ITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICE 809

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   G EPN ++Y+IL+     +    EA  L  EM      P   TYN LI   A  G 
Sbjct: 810 MKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGM 869

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPII---ARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            + A ++  EM +     ++++Y+ ++   ++L +  +V +++K + ++     KP++GT
Sbjct: 870 MNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGF---KPSKGT 926

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSL 403
            + ++      G   EA  ++++L
Sbjct: 927 ISSMSRAFSKPGMTWEARRLLKTL 950



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 113/250 (45%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M+  G   D+     L++ LC     +KA  V++ M+  GI PD  ++  L+   CK 
Sbjct: 703 ELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKS 762

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            ++  A     +M   G   N  T+N+L+ GL   G + ++   +  + + GL PN  TY
Sbjct: 763 SHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTY 822

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L+    K+     A++L  ++++KG  P   +YN L++   K G   +A   F ++  
Sbjct: 823 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKR 882

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G      +Y+ILL          E   LL +M      P+  T + +  + +  G T  
Sbjct: 883 RGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWE 942

Query: 327 ALKVLDEMVK 336
           A ++L  + K
Sbjct: 943 ARRLLKTLFK 952



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 128/321 (39%), Gaps = 11/321 (3%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+  L   G    A RF R +P      + ++ N ++ S C       A  LL    G  
Sbjct: 57  LIPALASSGLVAAASRF-RPVPG-----DPLTLNSIILSYCSLHALRPALSLLRSSSGPQ 110

Query: 304 R--SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +   V+YNI +  L+  G    A  VL EM K        + +  +  L   G V  
Sbjct: 111 PQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGE 170

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYV 418
                + +   R     G     A++ G  KVQ+   A A+++ +  +  S     Y  +
Sbjct: 171 AAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTL 230

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           +      G    A+++   M   G  P   T+++LI   C    IEEA  ++  M     
Sbjct: 231 VAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGV 290

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PDV   +AL+ GLC+  R   +  +F+ M + G  PN  TY   ++ +A    +  S  
Sbjct: 291 LPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLG 350

Query: 539 VLKELQLRQVVSESAVERLVM 559
           +L E+  R V  +  +   VM
Sbjct: 351 LLGEMVSRGVAMDLVMYTTVM 371


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 212/433 (48%), Gaps = 3/433 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P +     +L+ LCK+ K+  A+   E   ++G   D  +YT +V+ L K   +  A
Sbjct: 125 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + L+EK+   G      TYN+L+ GLC +G L +++  L +++  G  P+  TY+ L++ 
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             KE+    A KL  ++  +G   + V Y  L+ GL + G+  +A   ++ + S+G  P+
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 304

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV+ + ++  LC  GR   A  +   M+    +P  V Y+ LI  L    K D AL++L 
Sbjct: 305 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVG 391
           +M K    P   +YN +I  LC  G V+      D+M    CKP+  TYN L +  C  G
Sbjct: 365 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
               A  +   + +   S     Y  +I+ LC++ +  +A      M + G  PDS+ YS
Sbjct: 425 NTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYS 484

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SL+ GLC  G +E    +F  ME      +      L+  LCK+ R D ++ +F  + ++
Sbjct: 485 SLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 543

Query: 512 GQMPNETTYTILV 524
           G MP+   Y  ++
Sbjct: 544 G-MPHPYAYNSII 555



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 213/466 (45%), Gaps = 5/466 (1%)

Query: 99  VQATNLLYDL-CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN--CLCKKGNVGYAMQL 155
           V   N L D+  +  + ++A  +++  +++  +PD  ++  L+   CL ++    +A+ +
Sbjct: 59  VHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAV-I 117

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            E  EDYG   +  T+N ++ GLC  G +  ++   +     G   +  TY+ +++   K
Sbjct: 118 REMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAK 177

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            + +  A+ L++ I A G  P + +YN LL GLCK GR EEAI   R +   G  P+VV+
Sbjct: 178 NKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+  L  E R  EA +L  EM         V Y  LI  L   GK   A  V   M 
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMT 297

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
                P   + + +I  LC  G++   V+    M  R   PNE  Y+ L   LC   K+ 
Sbjct: 298 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 357

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            A  ++  +     +     Y  +I  LC+ G    A     EM + G  PD YTY+ L+
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILV 417

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G C  G  + A  +F  M      P+V  +  L+ GLCK R+   +   FQ M E+G  
Sbjct: 418 SGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCP 477

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           P+   Y+ LV+G+    +LE    +  E++   V +     RL+  
Sbjct: 478 PDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH 523



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 185/388 (47%), Gaps = 3/388 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ DA   +E++ + G  P +     LL  LCK  ++++AI ++  +V +G  
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L++ L K+     A +L ++M   G   +TV Y +L+RGL   G + Q+   
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  +G VP+  T S +++   K   + AA+++   + A+G  PN V Y+ L+ GLCK
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + + A+     +      P+ ++YNIL+  LC  G  E A     EM      P + T
Sbjct: 353 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 412

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNIL+      G TD A  V D+M      P+  +Y  +I+ LC   ++         M 
Sbjct: 413 YNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMK 472

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            R C P+   Y+ L   LC  GK++    +   +     ++ Q   + +I  LC+  +  
Sbjct: 473 ERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTR-LIFHLCKANRVD 531

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           +A  L   + K G  P  Y Y+S+I  L
Sbjct: 532 EAVSLFNAIRKEGM-PHPYAYNSIISTL 558



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 176/356 (49%), Gaps = 18/356 (5%)

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +  T + LL+   + +    A  LL + +A    P++ ++NVL+TG C     EEA
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 258 IRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT------IVT 310
               R++    G  P++ ++N++L  LC  G+      +LA MD  + + T      I T
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK------VLAAMDHFETTTTNGCTIDIHT 167

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  ++  LA + K   A+ +++++      P+ A+YN ++  LC  G+++  +  L ++ 
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 227

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
              C P+  TY  L  + G+GK +   EA+ + + +  +        Y  +I  L + GK
Sbjct: 228 DNGCTPDVVTYTSL--IDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             QA  +   MT  G  PD  T S++I GLC  G I  A+ IF  ME     P+   ++A
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 345

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L+ GLCK+R+ D +LE+   M +    P+  TY IL++G+    ++E +     E+
Sbjct: 346 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 401



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 37/317 (11%)

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
           P  GF+ +V + N LL       R  EA  LL         P + T+N+LI       + 
Sbjct: 51  PRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREP 110

Query: 325 DHALKVLDEMVKG-RFRPSAASYNPIIARLCSEGKV-----------------DL----- 361
           + A  V+ EM +     PS  ++N ++  LC  GKV                 D+     
Sbjct: 111 EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTA 170

Query: 362 -------------VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
                         V  ++++    C P   TYN L   LC +G+++EA  +++ + +  
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            +     Y  +I  L ++ ++++A++L  EM   G   D+  Y++LIRGL   G I +A 
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQAS 290

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            ++  M      PDV   + ++ GLCK+ R   ++ +F+ M  +G  PNE  Y+ L+ G+
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350

Query: 528 AHQDELELSAEVLKELQ 544
               +++ + E+L +++
Sbjct: 351 CKARKMDCALEMLAQMK 367



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 2/174 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M+  G KPDV     L+   CKA     A  V + M SS   P+  +Y  L++ LCK
Sbjct: 398 FDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCK 457

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +  +  A    + M++ G P ++  Y+SLV GLC  G L       D + + G V N+ T
Sbjct: 458 RRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQT 516

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            + L+    K   V  A+ L +  I K G P+  +YN +++ L K  +     R
Sbjct: 517 RTRLIFHLCKANRVDEAVSLFN-AIRKEGMPHPYAYNSIISTLIKSAKVNPCTR 569


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 218/478 (45%), Gaps = 34/478 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DAF     MV     P +V  T LL       + +  I   + M   GI  D  S+T
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++C C+   + +A+ ++ KM   GY  + VT+ SL+ G C++  +  +   +  +++ 
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN   Y+ L++   K   ++ A++LL+++  KG   ++V+YN LLTGLC  GR  +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R  RD+  +   P+VV++  L+     +G  +EA EL  EM      P  VTYN +I  
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  HG+   A K  D M      P+  +YN +I+  C    VD  +K   +M       +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  I   C+ GK   A  +   
Sbjct: 351 IFTYNTL----------------------------------IHGYCQVGKLRVALDIFCW 376

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M     TPD  T+  L+ GLC+ G IE AL  F  M E +    +  +N ++ GLCK+ +
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            + + E+F  +  +G  P+  TYTI++ G+        + E+++ ++   ++ +   E
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAE 494



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 193/401 (48%), Gaps = 34/401 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+ A   L +M+  G++P +V   +LL+  C  N++  A  ++ +MV SG  P+  
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++ LCK G +  A++L+ +ME  G   + VTYN+L+ GLC  G  + + + L  +
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++ + P+  T++ L++   K+  +  A +L  ++I     PN V+YN ++ GLC  GR 
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A + F  + SKG  PNVV+YN L+   C     +E  +L   M     +  I TYN L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK   AL +   MV  R  P   ++  ++  LC  G+++  +   D M     
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM----- 412

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           + +E  Y G+                              Y  +I  LC+  K  +A++L
Sbjct: 413 RESE-KYIGIVA----------------------------YNIMIHGLCKADKVEKAWEL 443

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
              +   G  PD+ TY+ +I GLC  G   EA E+   M+E
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 36/344 (10%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L TG     R E+A   F ++      P++V +  LL +     R+E       +M+   
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDE------------------------------ 333
            S  + ++ ILI       +   AL VL +                              
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 334 -----MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
                MVK  + P+   YN +I  LC  G++++ ++ L++M  +    +  TYN L   L
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G+  +A  +++ +  +  +     +  +I    ++G   +A +L  EM +    P++
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+S+I GLCM G + +A + F +M      P+V  +N L+ G CK R  D  +++FQ 
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           M  +G   +  TY  L+ G     +L ++ ++   +  R+V  +
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 231/470 (49%), Gaps = 6/470 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A     RM+     P  V    LL  + K       + +   M S GI P+  +   
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 139 LVNCLC--KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           L+N  C   +G +G A+ L +KM   G+  + VTY +L+ GLC +GN + +++ L  ++Q
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           K   PN F Y+ ++++  K+R V  A  L  +++ KG  P++ +YN L+  LC     + 
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILI 315
                 ++      P+VVS+N ++ +LC EG+  EA++++ +M   G   P +++YN LI
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                  + D A+ +  EM +    P   +Y+ +I  LC   ++   +    +M      
Sbjct: 282 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 341

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN  TY  L   LC    + EA A+++++         +     I  +CR G+   A  L
Sbjct: 342 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 401

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              ++  G  PD +TYS +I GLC  GL++EA ++F  M+E     +   +N +  G  +
Sbjct: 402 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 461

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS-AEVLKEL 543
           +  T  ++++ Q M+ +G   + +T T+ V+ ++  D L+ S  ++L++ 
Sbjct: 462 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLS-DDGLDQSLKQILRDF 510



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 216/453 (47%), Gaps = 4/453 (0%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  AI     M+     P    +  L+  + K  +    + L  +M+ +G P N  T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 172 NSLVRGLCML--GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           + L+   C L  G + ++L   D++I +G  P+  TY  L+    K     AA++LL  +
Sbjct: 100 HILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 159

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           + K  +PN+ +YN ++  LCK+ +  EA   F ++ +KG  P++ +YN L+ +LC    W
Sbjct: 160 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 219

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNP 348
           +    LL EM      P +V++N ++ +L   GK   A  V+D+M+ +G   P+  SYN 
Sbjct: 220 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNT 279

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I   C   ++D  +    +M  +   P+  TY+ L   LC V ++Q+A A+   +    
Sbjct: 280 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 339

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                  Y+ ++  LC+     +A  LL  +      PD    +  I G+C  G +E A 
Sbjct: 340 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 399

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++F  +     +PDV  ++ ++ GLC+    D + ++F+ M E G   N   Y  +  G 
Sbjct: 400 DLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGF 459

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
              +E   + ++L+E+  R   ++++   L ++
Sbjct: 460 LRNNETSRAIQLLQEMVARGFSADASTMTLFVK 492



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 196/410 (47%), Gaps = 11/410 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    ++M+ +G +PDVV    L+  LCK      AI+++  MV     P+  +Y 
Sbjct: 113 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 172

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   V  A  L  +M   G   +  TYNSL+  LC L         L+ ++  
Sbjct: 173 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 232

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEE 256
            ++P+  +++ +++A  KE  V  A  ++D +I +GG  PN++SYN L+ G CK  R ++
Sbjct: 233 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDK 292

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+  F ++  +   P+ V+Y+ L+  LC   R ++A  L  EM    + P +VTY IL+ 
Sbjct: 293 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 352

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L  +     A+ +L  +      P     N  I  +C  G+++        +  +  +P
Sbjct: 353 YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 412

Query: 377 NEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           +  TY    NG   LC  G + EA  + + +     +     Y  +     R  +T +A 
Sbjct: 413 DVWTYSIMING---LCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAI 469

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGL---IEEALEIFVVMEEYDYK 479
           QLL EM   GF+ D+ T +  ++ L  +GL   +++ L  F   + + Y+
Sbjct: 470 QLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWIYE 519



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 167/353 (47%), Gaps = 40/353 (11%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D ++ +AF     MV+KG  PD+    +L++ LC   + K    ++  MV S I+
Sbjct: 176 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 235

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           PD  S+  +V+ LCK+G V  A  +V+KM +  G   N ++YN+L+ G C +  +++++ 
Sbjct: 236 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMY 295

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL---- 245
               + ++ L+P+  TYS L+        +  A+ L  +++A    PNLV+Y +LL    
Sbjct: 296 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 355

Query: 246 -------------------------------TGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
                                           G+C+ G  E A   F +L SKG +P+V 
Sbjct: 356 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW 415

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y+I++  LC  G  +EA++L  EMD    +     YN +      + +T  A+++L EM
Sbjct: 416 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           V   F   A++    +  L  +G    + + L Q+    CK     Y  + +L
Sbjct: 476 VARGFSADASTMTLFVKMLSDDG----LDQSLKQILRDFCKQKSWIYENVMVL 524



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 6/296 (2%)

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY--HGKTDHAL 328
           P+ V +N LL S+           L  +MD     P I T +ILI S  +   GK   AL
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            + D+M+   FRP   +Y  +I  LC  G     ++ L  M  + C+PN   YN +   L
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           C   +V EAF +   +  K   SP  F Y  +I +LC   +      LL EM      PD
Sbjct: 179 CKDRQVTEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 237

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
             ++++++  LC EG + EA ++   M +     P+V ++N L+ G CK +R D ++ +F
Sbjct: 238 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLF 297

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
             M  +  +P+  TY+ L+ G+ H + L+ +  +  E+     +      R+++ Y
Sbjct: 298 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 353


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 149/538 (27%), Positives = 259/538 (48%), Gaps = 27/538 (5%)

Query: 11  LANPSPEPFRKAYGFYSQIPNLHSF----SLNKGFIRVLASTQVTISPKDSV----YTKP 62
           L N + + FR     Y+ +  +H +     L+ G+ R        ++PK S+    YT  
Sbjct: 64  LLNQALKRFRPDVFLYTSV--IHGYCKAGDLDTGYFR-------AVTPKASLDVISYTTV 114

Query: 63  NRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME 122
            +   ++        ++++A    E + + G  P+VV  T ++  L KA +++  +K  E
Sbjct: 115 IKGLADSK-------RIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 167

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
            M  S  +P  ++YT +++ LCK   +  A ++ E+M   G   +T+TY +L+ G     
Sbjct: 168 EMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 227

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
            ++++ + LD ++ KG  P A TY  ++    K   ++ A +++  +  +G +P L  + 
Sbjct: 228 KMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFT 287

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            LL+    +GR EEA +   ++ ++G  P+V+ Y  L+  L   GR  EA  +   M   
Sbjct: 288 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 347

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
             +P  +TY  +I + +  G  + A ++L+ M K    P   +YN ++       +VD  
Sbjct: 348 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA 407

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVIT 420
               D+M     KPN  T+N L   L   GK   AF++ + +  K+   P    Y  +I 
Sbjct: 408 FGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILID 467

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L + G+  +AF    EM   G  P+ +TY+SLI  L   G I EA ++   M +    P
Sbjct: 468 GLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP 527

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI-AHQDELELSA 537
           DV  ++AL+ GL  S   D + +VFQ M+++G  PNE TY +L  G  A    L+L A
Sbjct: 528 DVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEA 585



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 215/468 (45%), Gaps = 5/468 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G +P +V    ++  L   +KM +A K    M+ +G  PD  ++T L++  CK G     
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            +L+ +      P +   Y S++ G C  G+L+       R +      +  +Y+ +++ 
Sbjct: 62  HKLLNQALKRFRP-DVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKG 117

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
               + +  A +L +++   G  PN+V+Y  ++ GL K GR E+ ++ F ++      P 
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             +Y +++  LC      +A ++  +M      P  +TY  LI   +   K D A K+LD
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVG 391
            M+     P+A +Y  I+   C    ++   + + QM  R C+P    +  L +     G
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           + +EA+ ++  +  +  +     Y  +I  L   G+  +A  +   M + G  PD+ TY 
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           ++I+     G +E A EI  +M +    PD   +N+L+ G  K  R D +  V+  M+  
Sbjct: 358 TIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS 417

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           G  PN  T+ +L+ G+    + + +  + KE+  ++ V  + V   ++
Sbjct: 418 GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTIL 465


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 229/436 (52%), Gaps = 13/436 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  M+     P+ V     +   C+   + +A++++E M   G  PD   Y+ LVN   +
Sbjct: 30  MREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSE 89

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  A++L+  M     P NTV YN+ ++GLC+ G   +  + +  +++K   PN  T
Sbjct: 90  HGRVDEALKLLNTM--LCRP-NTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDAT 146

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +S L+ +  + R V  A+++L+ +   G  P++VSYN +++    + R ++A++  + + 
Sbjct: 147 FSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML 206

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            K   P+ +S+N +L+ LC   RW +A EL+A+M   D     +T+NILI SL  +G+  
Sbjct: 207 CK---PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVK 263

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A++V + M K R  P   +Y+ +I     +G  ++     D      C+ +  +YN  L
Sbjct: 264 DAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMA---FDLFRSMPCRADIFSYNATL 320

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC   +  +A  +I  +  +     +  +  +I+SLC+KG   +A  +  +M KYG T
Sbjct: 321 KGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGIT 380

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD +TY++LI G   +G +++AL+    M     +PD  ++N++L GLC++ R   + ++
Sbjct: 381 PDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKL 437

Query: 505 FQMMIEKGQMPNETTY 520
              M+ K   PNE T+
Sbjct: 438 VTEMLRKNCTPNEVTF 453



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 201/378 (53%), Gaps = 10/378 (2%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +T TYN++++GLC      Q+ + +  +I+    PN  T++  + A  +   +  A++LL
Sbjct: 6   DTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELL 65

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           + +   G  P+++ Y+ L+ G  + GR +EA++    +  +   PN V YN  L+ LC+ 
Sbjct: 66  EQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIA 122

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GRWEE  EL+AEM   D  P   T++ LI SL  +   ++A++VL++M K  + P   SY
Sbjct: 123 GRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSY 182

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGN 405
           N II+    + + D  +K L  M    CKP+  ++N  L  LC   +  +A  ++  +  
Sbjct: 183 NTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLK 239

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K     +  +  +I SLC+ G+   A ++   M KY   PD  TYSSLI G   +GL E 
Sbjct: 240 KDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEM 299

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A ++F  M     + D+ ++NA L GLC + R D + E+   M+ +  +PNE T+ IL+ 
Sbjct: 300 AFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILIS 356

Query: 526 GIAHQDELELSAEVLKEL 543
            +  +  +  + +V +++
Sbjct: 357 SLCQKGLVNRAIDVYEQM 374



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 210/448 (46%), Gaps = 42/448 (9%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + PD  +Y  ++  LC       A +L+ +M       N VT+ + +R  C  G L++++
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           + L+++ + G  P+   YS L+    +   V  A+KLL+ ++ +   PN V YN  L GL
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGL 119

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C  GR EE      ++  K   PN  +++ L+ SLC     E A E+L +M      P +
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           V+YN +I   +   + D ALK+L  M+    +P   S+N ++  LC   +    V+ + +
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 236

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ---------------SLGN---KQNS 409
           M  + C+ NE T+N L   LC  G+V++A  + +               SL N   +Q  
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGL 296

Query: 410 SPQEF--------------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
               F              Y   +  LC   +   A +L+ +M      P+  T++ LI 
Sbjct: 297 DEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILIS 356

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
            LC +GL+  A++++  M +Y   PD+  +NAL+ G  +  R D +L+    M  +   P
Sbjct: 357 SLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---P 413

Query: 516 NETTYTILVEGIAHQDELELSAEVLKEL 543
           +  +Y  +++G+   +  + + +++ E+
Sbjct: 414 DTISYNSILKGLCRAERWKDAEKLVTEM 441



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 177/334 (52%), Gaps = 12/334 (3%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  MV K   P+    + L+  LC+   ++ A++V+E M   G +PD  SY  +++C   
Sbjct: 132 IAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSD 191

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +     A++L++ M       +T+++N++++ LC       +++ + ++++K    N  T
Sbjct: 192 QARADDALKLLKSM---LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMT 248

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+++  +   V  A+++ + +      P++V+Y+ L+ G  ++G  E A   FR +P
Sbjct: 249 FNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP 308

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +    ++ SYN  L+ LCM  RW++A EL+A+M   D  P  VT+NILI SL   G  +
Sbjct: 309 CRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVN 365

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            A+ V ++M K    P   +YN +I     +G++D  +K L  M    C+P+  +YN  L
Sbjct: 366 RAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSIL 422

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKY 417
             LC   + ++A  ++  +  K N +P E  +KY
Sbjct: 423 KGLCRAERWKDAEKLVTEMLRK-NCTPNEVTFKY 455



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 126/231 (54%), Gaps = 6/231 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA   + +M+ K  + + +    L+  LC+  ++K AI+V E+M     +PD  +Y+ L+
Sbjct: 229 DAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLI 288

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N   ++G    A  L   M       +  +YN+ ++GLCM    + + + +  ++ +  +
Sbjct: 289 NGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCL 345

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN  T++ L+ +  ++  V+ A+ + + +   G  P++ +YN L+ G  ++GR ++A++F
Sbjct: 346 PNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKF 405

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
              +P    EP+ +SYN +L+ LC   RW++A +L+ EM   + +P  VT+
Sbjct: 406 LSTMPC---EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 3/131 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   +  MV++   P+ V    L+  LC+   + +AI V E M   GI PD  +Y 
Sbjct: 328 RWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYN 387

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N   ++G +  A++ +  M       +T++YNS+++GLC       + + +  +++K
Sbjct: 388 ALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRK 444

Query: 198 GLVPNAFTYSF 208
              PN  T+ +
Sbjct: 445 NCTPNEVTFKY 455


>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
          Length = 678

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 245/536 (45%), Gaps = 76/536 (14%)

Query: 41  FIRVLASTQVTISPKDSVYTKPNRKPGNNND--------TRH-------------RDHKL 79
           F R  A ++  +SP   ++ KP RKP + N         ++H                KL
Sbjct: 177 FGRAAADSEKDVSP---IHAKP-RKPLDQNPEGMDVAGFSKHGGKCYADNLRRYCNSGKL 232

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
             A   ++ MV  G  P+      ++  L K  K  KA  V+E+MV SG +PD  S   L
Sbjct: 233 IQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNML 292

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN--LNQSLQFLDRLIQK 197
           +  LC+ G +  A+Q++E M   G   + +T+N+L+R  CM      ++++ F    ++ 
Sbjct: 293 IAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIR--CMFNQRMYDRAISFWKEQLRL 350

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   T + L++   K  G   A+++LD++  +G +P++V+YN L++  CK GR  +A
Sbjct: 351 GWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDA 410

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 L ++G EPN  +Y ILL +LC   RW+E  +LL +M+  +R P + TYNI I  
Sbjct: 411 KFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINY 470

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G  D A+ VL+ MV     P   + N ++  +  +                     
Sbjct: 471 FCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKK--------------------- 509

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                        G V+EA  I + +           Y  +I +L +K +  +A  L  E
Sbjct: 510 -------------GMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDE 556

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G +PD  TY SL+ G C + + +EAL++   M    ++     F  ++  LC+  +
Sbjct: 557 MLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGK 616

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIA-----------HQDELELSAEVLKE 542
            + + E+ ++M+ K  +P  +  + +V  +A           HQ  +E   E+LKE
Sbjct: 617 VEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLVE--CEILKE 670



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 175/375 (46%), Gaps = 3/375 (0%)

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           Y   +R  C  G L Q+   +D ++  G +P       ++    K    + A  +L+ ++
Sbjct: 219 YADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMV 278

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
             GG P+ +S N+L+  LC+ G+   A++   D+   G  P+ +++N L+R +  +  ++
Sbjct: 279 LSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYD 338

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            A     E       P  +T  +L+  +  +     AL+VLDE+     +P   +YN +I
Sbjct: 339 RAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALI 398

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNS 409
           +  C  G+++     L ++     +PN  TY  L   LC + +  E   +++ + N+ N 
Sbjct: 399 SASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDM-NQVNR 457

Query: 410 SPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
            P    Y   I   C+ G   QA  +L  M     +PD  T ++L+  +  +G++EEAL 
Sbjct: 458 DPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALG 517

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           I   + E  YK  +  +N L+  L K      ++ +F  M+  G  P++ TY  LV G  
Sbjct: 518 IARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFC 577

Query: 529 HQDELELSAEVLKEL 543
            +D  + + ++L ++
Sbjct: 578 KKDMADEALDLLNQM 592



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 69/158 (43%)

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK+ +A  +I  +         +    +I  L + GK  +A  +L  M   G  PD+
Sbjct: 227 CNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDT 286

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            + + LI  LC  G +  AL++   M      P    FN L+  +   R  D ++  ++ 
Sbjct: 287 ISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKE 346

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            +  G  P E T T+LV+ +      + + EVL EL L
Sbjct: 347 QLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSL 384


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 233/490 (47%), Gaps = 41/490 (8%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAI---KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           +P+++    LL  L ++N     +   +V +  V  G+ P+ +++  L++  C   N   
Sbjct: 170 RPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEE 229

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A++L+ +M +YG   + VTYN+++  LC    L Q    L ++   GL PN  TY+ L+ 
Sbjct: 230 ALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVH 289

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K + +  A ++++ +  KG  P++ +YN ++ GLC EG+ +EA+R    + S    P
Sbjct: 290 GYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVP 349

Query: 272 NVVSYNILLRSLCMEGRWEEAN-ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           +VV+YN L+   C E R  +A  +L+ EM         VT+NI+I      GK D A  V
Sbjct: 350 DVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNV 408

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCG 389
           + +MV+  F P   +YN +I   C  GK+    K +D+M  +  K +  T N  L  +C 
Sbjct: 409 MVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCL 468

Query: 390 VGKVQEAFA--------------------IIQSLGNKQNSSPQEF--------------- 414
             ++ +A+                     I+    ++Q     +                
Sbjct: 469 EKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIIT 528

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I  LC  GKT QA   L E+ + G  PD  T + +I G C EG +E+A +    M 
Sbjct: 529 YNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMV 588

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E+  KPD+   N LL GLC+    +  L +F   I KG+  +  TY I++     +  LE
Sbjct: 589 EHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLE 648

Query: 535 LSAEVLKELQ 544
            + +++ E++
Sbjct: 649 DAFDLMTEME 658



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 223/460 (48%), Gaps = 1/460 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D+   +A   + +M   G  PD V    +L  LCK +++ +   ++  M +SG+ P+ ++
Sbjct: 224 DNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNT 283

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  LV+  CK   +  A +++E M   G   +  TYN++VRGLC  G ++++++  D++ 
Sbjct: 284 YNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKME 343

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              LVP+  TY+ L++  ++ RG  AA KL++++ A+G K N V++N+++   C EG+ +
Sbjct: 344 SFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKID 403

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA      +   GF P+  +YN ++   C  G+  EA +++ EM          T N L+
Sbjct: 404 EASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLL 463

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            ++    + D A  +  +  K  +     +Y  +I     + + D  +K  ++M      
Sbjct: 464 HTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIV 523

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
               TYN +   LC  GK  +A   +  L  K     +     +I   C +G   +AFQ 
Sbjct: 524 ATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQF 583

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M ++   PD +T + L+RGLC EG++E+ L +F          D   +N ++   CK
Sbjct: 584 HNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCK 643

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            RR + + ++   M  K   P+  TY  +V G+      E
Sbjct: 644 ERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTE 683



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 193/395 (48%), Gaps = 13/395 (3%)

Query: 76  DHKLNDAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +H+ +DA  +L E M ++G K + V    ++   C   K+ +A  VM  MV SG  PD  
Sbjct: 363 EHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCF 422

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N  CK G +  A +++++M   G   +T T N+L+  +C+   L+ +     + 
Sbjct: 423 TYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKA 482

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G + +  TY  L+   +K+     A+KL +++   G    +++YN ++ GLC  G+T
Sbjct: 483 RKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKT 542

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+    +L  KG  P+  + NI++   C EG  E+A +   +M      P I T NIL
Sbjct: 543 DQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G  +  L + +  +         +YN II+  C E +++     + +M  +  
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK------QNSSPQ-----EFYKYVITSL 422
           +P+  TYN +   L   G+ +EA  +      K      Q++SP+       Y   I+SL
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           C +GK   A +L  +  + G + + YTY  L+ GL
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGL 757



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 170/332 (51%), Gaps = 13/332 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A+  ++ M  KG K D      LL+ +C   ++  A  +       G I D  +Y 
Sbjct: 436 KMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYG 495

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+    K      A++L E+M++ G     +TYN+++RGLC+ G  +Q++  L+ L++K
Sbjct: 496 TLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEK 555

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLVP+  T + ++     E  V  A +  + ++    KP++ + N+LL GLC+EG  E+ 
Sbjct: 556 GLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKG 615

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F    SKG   + V+YNI++ S C E R E+A +L+ EM+G +  P   TYN ++  
Sbjct: 616 LTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTG 675

Query: 318 LAYHGKTDHALKV-LDEMVKGR----------FRPSAASYNPIIARLCSEGKVDLVVKCL 366
           L   G+T+ A K+ L    KG+             S   Y+  I+ LC++GK    +K  
Sbjct: 676 LTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLF 735

Query: 367 DQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFA 398
            Q   +    N+ TY  + ++ G+ K +++F 
Sbjct: 736 QQAEQKGVSLNKYTY--IKLMDGLLKRRKSFT 765



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 182/369 (49%), Gaps = 10/369 (2%)

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA---AMKLLDDIIAKGGKPNLVSYNVLL 245
           Q  +++ +    PN  T + LL A  +    H+   + ++  D +  G +PN+ ++N+L+
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G C +  TEEA+R    +   G  P+ V+YN +L +LC   +  +  +LL +M      
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P   TYNIL+           A +V++ M      P   +YN ++  LC EGK+D  V+ 
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 366 LDQMFHRRCKPNEGTYNGLAMLCGVGKVQEA-FAIIQSL---GNKQNSSPQEFYKYVITS 421
            D+M   +  P+  TYN L   C   +  +A F +++ +   G K+N      +  +I  
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVT---HNIMIKW 395

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            C +GK  +A  ++ +M + GF+PD +TY+++I G C  G + EA ++   M     K D
Sbjct: 396 FCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLD 455

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
               N LL  +C  ++ D +  +     ++G + +E TY  L+ G    ++ + + ++ +
Sbjct: 456 TFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWE 515

Query: 542 ELQLRQVVS 550
           E++   +V+
Sbjct: 516 EMKETGIVA 524



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 146/309 (47%), Gaps = 17/309 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D + + A    E M   G    ++    ++  LC + K  +A+  +  ++  G++PD S
Sbjct: 503 KDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDES 562

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   +++  C +G V  A Q   KM ++    +  T N L+RGLC  G L + L   +  
Sbjct: 563 TSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTW 622

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I KG   +  TY+ ++ +  KER +  A  L+ ++  K  +P+  +YN ++TGL K GRT
Sbjct: 623 ISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRT 682

Query: 255 EEAIRFFRDLPSKGFE-------PNVVSYNIL----LRSLCMEGRWEEANELLAEMDGGD 303
           EEA +       KG +       P + + +++    + SLC +G++++A +L  + +   
Sbjct: 683 EEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKG 742

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR---FRPSAASYNPIIARLCSEGKVD 360
            S    TY  L+  L    K+     +L  MV      F  +   Y  I+     E +++
Sbjct: 743 VSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQFFDRNPMRYAHILWCFGFELEIE 802

Query: 361 L---VVKCL 366
           +   V++CL
Sbjct: 803 VPEGVLRCL 811



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 108/237 (45%), Gaps = 4/237 (1%)

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV---KCLDQMFHRRCKPNEGTYNGLA 385
           ++ ++M + RFRP+  + N ++  L        +V   +          +PN  T+N L 
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C     +EA  +I  +G          Y  V+T+LC++ +  Q   LL +M   G  
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  TY+ L+ G C    ++EA E+  +M      PDV  +N ++ GLC   + D ++ +
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
              M     +P+  TY  L++G       + + ++++E++ R V        +++++
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKW 395



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 86/171 (50%), Gaps = 3/171 (1%)

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +E F     LG + N +    +  +I   C    T +A +L+ +M +YG  PD+ TY+++
Sbjct: 196 REVFQDAVKLGVQPNVNT---FNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTV 252

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           +  LC    + +  ++ + M+     P+ + +N L+ G CK +    + EV ++M  KG 
Sbjct: 253 LTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGM 312

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           +P+  TY  +V G+  + +++ +  +  +++  ++V +      ++   FE
Sbjct: 313 LPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFE 363


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 220/449 (48%), Gaps = 34/449 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +++ A    +R    G +   +    +L  L K  ++     V + M+   I  +  
Sbjct: 171 KNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVV 230

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  ++N LCK G    A  +VE M+ +G+  + +TYN+++ G C  G + ++   L  +
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + K + PN  T++ L++   ++  V AA K+ +++  +G +PN+V+YN L+ GLC  G+ 
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+     +   G +PNVV+YN L+   C +   +EA E+L ++     +P ++T+N L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G+ D A  +   M+     P+ ++YN +I   C EG V    K   +M     
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           K +  TYN L                                  + +LC+KG+T +A +L
Sbjct: 471 KADLVTYNIL----------------------------------VDALCKKGETRKAVRL 496

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L EM + G  P   TY++LI G   EG    AL +  +ME+   + ++  +N L+ G C 
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
             + + +  +   M+EKG +PN TTY IL
Sbjct: 557 KGKLEEANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 186/380 (48%), Gaps = 34/380 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E M + G  P V+    ++   CKA KM KA  +++ MV+  I P+  ++  L++  C+
Sbjct: 252 VEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCR 311

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             NV  A ++ E+M+  G   N VTYNSL+ GLC  G L+++L   D++   GL PN  T
Sbjct: 312 DENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K++ +  A ++LDDI  +G  PN++++N L+    K GR ++A      + 
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PNV +YN L+   C EG  +EA +L  EM+G      +VTYNIL+ +L   G+T 
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETR 491

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+++LDEM +    PS  +YN +I     EG     +     M  +  + N  TYN L 
Sbjct: 492 KAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVL- 550

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
                                            I   C KGK  +A +LL EM + G  P
Sbjct: 551 ---------------------------------IKGFCNKGKLEEANRLLNEMLEKGLIP 577

Query: 446 DSYTYSSLIRGLCMEGLIEE 465
           +  TY  L   +  +G I +
Sbjct: 578 NRTTYDILRDEMMEKGFIPD 597



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 205/420 (48%), Gaps = 8/420 (1%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           ++ II D   + Y+     K G +  A++  ++  DYG+  + ++ N ++  L   G + 
Sbjct: 157 ANSIIVDMLVWAYV-----KNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIG 211

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
                   +I++ +  N  T+  ++    K      A  +++D+ A G  P++++YN ++
Sbjct: 212 VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTII 271

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G CK G+  +A    +++ +K   PN +++NIL+   C +     A ++  EM      
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P +VTYN LI  L  +GK D AL + D+M     +P+  +YN +I   C +  +    + 
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 366 LDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLC 423
           LD +  R   PN  T+N L    G  G++ +AF +++S+       P    Y  +I   C
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFC 450

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R+G   +A +L  EM   G   D  TY+ L+  LC +G   +A+ +   M E    P   
Sbjct: 451 REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHL 510

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +NAL+ G  +   +  +L V  +M +KG+  N  TY +L++G  ++ +LE +  +L E+
Sbjct: 511 TYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 570



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 145/283 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD  +  A    E M  +G +P+VV   +L+  LC   K+ +A+ + + M   G+ P+  
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N  CKK  +  A ++++ +   G   N +T+N+L+      G ++ +      +
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ PN  TY+ L+    +E  V  A KL  ++   G K +LV+YN+L+  LCK+G T
Sbjct: 431 LDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+R   ++   G  P+ ++YN L+     EG    A  +   M+   R   IVTYN+L
Sbjct: 491 RKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVL 550

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           I      GK + A ++L+EM++    P+  +Y+ +   +  +G
Sbjct: 551 IKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 184/417 (44%), Gaps = 52/417 (12%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G I +   +  L++ L    N      L++      + +N+  ++SL     +LG+    
Sbjct: 102 GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL----SVLGSWG-- 155

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                         N+     L+ A  K   +  A++  D     G + + +S N +L  
Sbjct: 156 ------------CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS 203

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           L KEGR       ++++  +    NVV++++++  LC  G++++A +++ +M     SP+
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           ++TYN +I      GK   A  +L EMV  R  P+  ++N +I   C +  V    K  +
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 368 QMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           +M  +  +PN  TYN L                                  I  LC  GK
Sbjct: 324 EMQRQGLQPNVVTYNSL----------------------------------INGLCSNGK 349

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A  L  +M+  G  P+  TY++LI G C + +++EA E+   + +    P+V  FN 
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           L+    K+ R D +  +  MM++ G  PN +TY  L+ G   +  ++ + ++ KE++
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 15/273 (5%)

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           S + +  SL + G W  AN ++ +M              L+ +   +G+ D AL+  D  
Sbjct: 140 SNSTIFHSLSVLGSWGCANSIIVDM--------------LVWAYVKNGEMDLALEGFDRA 185

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKV 393
               FR SA S NP++  L  EG++ +V     +M  RR   N  T++  +  LC VGK 
Sbjct: 186 GDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKF 245

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           Q+A  +++ +     S     Y  +I   C+ GK ++A  LL EM      P+  T++ L
Sbjct: 246 QKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNIL 305

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G C +  +  A ++F  M+    +P+V  +N+L+ GLC + + D +L +   M   G 
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            PN  TY  L+ G   +  L+ + E+L ++  R
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKR 398


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 224/462 (48%), Gaps = 19/462 (4%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           V  +N    LC A K  +A K++  M+  G +PD S+Y+ ++  LC    V  A  L E+
Sbjct: 426 VNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEE 485

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+  G   +  TY  L+   C  G + Q+ ++ D ++ KG  PN  TY+ L+ A  K + 
Sbjct: 486 MKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQ 545

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR----DLPSKGFE---- 270
           +  A +L + ++ +G KPN+V+Y  L+ G CK G+ E+A + +     D+ S   +    
Sbjct: 546 MPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFK 605

Query: 271 --------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
                   PNV++Y  L+  LC   R +EA+ELL  M      P  + Y+ +I      G
Sbjct: 606 LDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIG 665

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K   A +V  +M +  + P+  +Y+  I  L  + ++DLV+K L +M    C PN   Y 
Sbjct: 666 KLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYT 725

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +   LC +GK  EA+ ++  +  K  +     Y  +I    + GK  Q  +L  +M   
Sbjct: 726 EMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSK 785

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P+  TY  LI   C  GL++EA ++   M++  +   + +   ++ G  +   T + 
Sbjct: 786 GCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIG 845

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L     + E   +P ++ Y IL++       LE++ ++L+E+
Sbjct: 846 L--LDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEI 885



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/547 (24%), Positives = 226/547 (41%), Gaps = 95/547 (17%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   N A  +L R+   G+KP       L+    +A+K+  A  V   M+S   + D  
Sbjct: 188 RNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRY 247

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + +     LCK G    A  L+++ ED  +  +TV YN +V GLC      +++  L R+
Sbjct: 248 TLSCFAYSLCKGGKCREAFDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHRM 305

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TY  LL    ++  +    ++L  +I +G  PN   +N L+   CK    
Sbjct: 306 RSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDY 365

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL---------------------------------- 280
             A + F+ +   G +P  + YNI +                                  
Sbjct: 366 SYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNK 425

Query: 281 -------RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
                  R LC  G++++A +++ EM G    P   TY+ +IG L    K + A  + +E
Sbjct: 426 VNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEE 485

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--------- 384
           M +    PS  +Y  +I   C  G +    K  D+M H+ C PN  TY  L         
Sbjct: 486 MKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQ 545

Query: 385 ---------AML------------------CGVGKVQEAFAIIQSL-GNKQNSSPQEFYK 416
                     ML                  C  G++++A  I   + G+ ++S   +++K
Sbjct: 546 MPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFK 605

Query: 417 Y---------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                           ++  LC+  +  +A +LL  M  +G  P+   Y ++I G C  G
Sbjct: 606 LDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIG 665

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +++A E+F  M E  Y P++  +++ +  L K  R DL L+V   M+E    PN   YT
Sbjct: 666 KLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYT 725

Query: 522 ILVEGIA 528
            +V+G+ 
Sbjct: 726 EMVDGLC 732



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 239/505 (47%), Gaps = 39/505 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K + AF  +  M+ KG  PD    + ++  LC A+K++KA  + E M  +GI+P   +YT
Sbjct: 440 KFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYT 499

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK G +  A +  ++M   G   N VTY +L+        +  + +  + ++ +
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE 559

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKL------------------LDDIIAKGGKPNLV 239
           G  PN  TY+ L++   K   +  A ++                  LD    +G  PN++
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEG--PNVI 617

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +Y  L+ GLCK  R +EA      + + G EPN + Y+ ++   C  G+ ++A E+  +M
Sbjct: 618 TYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM 677

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                SP + TY+  I  L    + D  LKVL +M++    P+   Y  ++  LC  GK 
Sbjct: 678 SERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT 737

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYK 416
           D   K + +M  + C PN  TY   AM+ G    GK+++   + + + +K  +     Y+
Sbjct: 738 DEAYKLMLKMEEKGCNPNVVTYT--AMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYR 795

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME-----GLIEEALEIFV 471
            +I   C  G   +A++LL EM +  +     ++  +I G   E     GL++E  E   
Sbjct: 796 VLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENES 855

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE--KGQMPNETTYTILVEGIAH 529
           V  +  Y+  +DN+        K+ R +++L++ + +       + N+  Y  L+E ++H
Sbjct: 856 VPVDSLYRILIDNY-------IKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSH 908

Query: 530 QDELELSAEVLKELQLRQVVSESAV 554
             +++ + E+   +  + VV E ++
Sbjct: 909 ASKVDKALELYASMISKNVVPELSI 933



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 233/494 (47%), Gaps = 33/494 (6%)

Query: 62  PNRKPGN---NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI 118
           PNR+  N   +   + RD+    A+   ++M+  G +P  +     +  +C +N+ + + 
Sbjct: 347 PNREIFNSLIHAYCKSRDYSY--AYKLFKKMIKCGCQPGYLVYNIFIGSVC-SNEEQPSS 403

Query: 119 KVMEM-------MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
            ++++       M+  G++ +  + +    CLC  G    A +++ +M   G+  +  TY
Sbjct: 404 DILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTY 463

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           + ++  LC    + ++    + + + G+VP+ +TY+ L+++  K   +  A K  D+++ 
Sbjct: 464 SKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLH 523

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KG  PN+V+Y  L+    K  +   A   F  +  +G +PNVV+Y  L+   C  G+ E+
Sbjct: 524 KGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEK 583

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A ++ A M G   S  +  Y           K DH         +G   P+  +Y  ++ 
Sbjct: 584 ACQIYARMRGDIESSDMDKY----------FKLDH------NNCEG---PNVITYGALVD 624

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC   +V    + LD M    C+PN+  Y+  +   C +GK+Q+A  +   +  +  S 
Sbjct: 625 GLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSP 684

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y   I  L +  +     ++L +M +   TP+   Y+ ++ GLC  G  +EA ++ 
Sbjct: 685 NLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLM 744

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
           + MEE    P+V  + A++ G  KS + +  LE+F+ M  KG  PN  TY +L+      
Sbjct: 745 LKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSN 804

Query: 531 DELELSAEVLKELQ 544
             L+ + ++L E++
Sbjct: 805 GLLDEAYKLLDEMK 818



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 194/414 (46%), Gaps = 9/414 (2%)

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           +LV   C+ G    A++ + +++D+GY  +  TYN+L++       L+ +      ++  
Sbjct: 181 FLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSY 240

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             V + +T S    +  K      A  L+D+  A+   P+ V YN +++GLC+    EEA
Sbjct: 241 AFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEA 298

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     + S    PNVV+Y ILL     +G+      +L+ M      P    +N LI +
Sbjct: 299 MDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHA 358

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK------VDLVVKCLDQMFH 371
                   +A K+  +M+K   +P    YN  I  +CS  +      +DLV K   +M  
Sbjct: 359 YCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLD 418

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
                N+   +  A  LCG GK  +AF II  +  K        Y  VI  LC   K  +
Sbjct: 419 LGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEK 478

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF L  EM + G  P  YTY+ LI   C  GLI++A + F  M      P+V  + AL+ 
Sbjct: 479 AFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIH 538

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              K+++  ++ E+F+MM+ +G  PN  TYT L++G     ++E + ++   ++
Sbjct: 539 AYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR 592



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 239/552 (43%), Gaps = 76/552 (13%)

Query: 54  PKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK 113
           P DS Y+K     G   D      K+  AF   E M   G  P V   T L+   CKA  
Sbjct: 458 PDDSTYSKV---IGFLCDAS----KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL 510

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +++A K  + M+  G  P+  +YT L++   K   +  A +L E M   G   N VTY +
Sbjct: 511 IQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTA 570

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLV------------------PNAFTYSFLLEAAYK 215
           L+ G C  G + ++ Q   R+  +G +                  PN  TY  L++   K
Sbjct: 571 LIDGHCKAGQIEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCK 628

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              V  A +LLD ++A G +PN + Y+ ++ G CK G+ ++A   F  +  +G+ PN+ +
Sbjct: 629 ANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYT 688

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+  +  L  + R +   ++L++M     +P +V Y  ++  L   GKTD A K++ +M 
Sbjct: 689 YSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKME 748

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           +    P+  +Y  +I      GK++  ++    M  + C PN  TY  L    C  G + 
Sbjct: 749 EKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLD 808

Query: 395 EAFAIIQSLGNKQNSSP--------------QEF---------------------YKYVI 419
           EA+ ++  +  KQ   P              QEF                     Y+ +I
Sbjct: 809 EAYKLLDEM--KQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILI 866

Query: 420 TSLCRKGKTYQAFQLLYEMTKY--GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            +  + G+   A  LL E++        + Y Y+SLI  L     +++ALE++  M   +
Sbjct: 867 DNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKN 926

Query: 478 YKPDVDNFNALLLGLCKSRRT----DLSLEVFQMMI----EKGQMPNETTYTILVEGIAH 529
             P++     L+ GL K  +      LS  + QM I    EK     E    +++  +  
Sbjct: 927 VVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDIHWLQEKATGRTEEMVKLVIAAMV- 985

Query: 530 QDELELSAEVLK 541
           + E  +S E+L+
Sbjct: 986 EAETGVSEEILE 997



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 107/265 (40%), Gaps = 39/265 (14%)

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N L+R  C  G W  A E L  +      P+  TYN LI       K D A  V  EM+ 
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREML- 238

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEA 396
                   SY  ++ R          + C               Y+    LC  GK +EA
Sbjct: 239 --------SYAFVMDR--------YTLSCF-------------AYS----LCKGGKCREA 265

Query: 397 FAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           F +I      ++  P   FY  +++ LC      +A  +L+ M      P+  TY  L+ 
Sbjct: 266 FDLIDE---AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLS 322

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G   +G +     I  +M      P+ + FN+L+   CKSR    + ++F+ MI+ G  P
Sbjct: 323 GCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQP 382

Query: 516 NETTYTILVEGIAHQDELELSAEVL 540
               Y I +  +   +E + S+++L
Sbjct: 383 GYLVYNIFIGSVCSNEE-QPSSDIL 406


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 235/466 (50%), Gaps = 18/466 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  D  L++ +    G  PDVV  T +++ L    ++ KA  +   MV  G++P+  
Sbjct: 251 RSQEALDMLLRMTK--GDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVV 308

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V+ LCK   +  A  ++ +M D     + VTY +++ G   LG   ++ +    +
Sbjct: 309 TYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM 368

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++GL+P+  T++ L+++  K +    A ++   I  KG KP+++SY++LL G   EGR 
Sbjct: 369 TREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRF 428

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +    F  +   G   +   +NIL+ +    G  +EA  +  EM G   SP +VTY  +
Sbjct: 429 VDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATV 488

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQMF 370
           I +L   G+   A++ L +M+    +P+   Y+ +I   C+ G +    +LV + +DQ  
Sbjct: 489 IAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI 548

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKV---QEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRK 425
            R   PN   ++ +   LC  G+V   Q+ F ++  +G++    P  F +  +I   C  
Sbjct: 549 PR---PNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDR----PDIFTFNSLIDGYCLV 601

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +AF +L  M   G  PD  TYS+LI G    G I++ L +F  M     KP    +
Sbjct: 602 GKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTY 661

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           + +L GL ++ RT  + ++F  MIE G   + +TYTI+++G+   +
Sbjct: 662 SLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNN 707



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 216/482 (44%), Gaps = 36/482 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSYTYLVNCLC 144
           L RM   G  PD      ++  LC  ++ ++A+  ++ M    G  PD  SYT +++ L 
Sbjct: 224 LHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLF 283

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
            +G +  A  L  +M   G   N VTYNS+V  LC    ++++   L ++    + P+  
Sbjct: 284 MEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEV 343

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+ ++           A K+  ++  +G  P++V++N L+  LCK  R++EA   F  +
Sbjct: 344 TYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSI 403

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            +KG +P+++SY+ILL     EGR+ + N L   M           +NILI + A  G  
Sbjct: 404 ATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMM 463

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           D AL +  EM      P+  +Y  +IA LC  G++   ++ L QM     KPN   Y+ L
Sbjct: 464 DEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSL 523

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF- 443
                                             I   C  G   +A +L+ EM   G  
Sbjct: 524 ----------------------------------IQGFCTHGDLIKAKELVSEMMDQGIP 549

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+   +SS+I  LC EG +  A ++F ++     +PD+  FN+L+ G C   + D +  
Sbjct: 550 RPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFG 609

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
           V   M+  G  P+  TY+ L+ G      ++    + +E+  ++V   +    LV+   F
Sbjct: 610 VLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLF 669

Query: 564 EG 565
             
Sbjct: 670 RA 671



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 199/440 (45%), Gaps = 18/440 (4%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           + +KGHKPD++  + LL+      +      +   M  +GI+ D+  +  L+N   K+G 
Sbjct: 403 IATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGM 462

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+ +  +M   G   N VTY +++  LC +G L  +++ L ++I  GL PN   Y  
Sbjct: 463 MDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHS 522

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKG-GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           L++       +  A +L+ +++ +G  +PN+  ++ ++  LC EGR   A   F  +   
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHI 582

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P++ ++N L+   C+ G+ ++A  +L  M      P +VTY+ LI      G+ D  
Sbjct: 583 GDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDG 642

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
           L +  EM+  R +P+  +Y+ ++  L   G+     K   +M       +  TY   L  
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQG 702

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC      EA  +   LG             +I +L +  +  +A  L   ++  G  P+
Sbjct: 703 LCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPN 762

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           + TY  +I  L  EG +EEA  +F  ME+    P     N                ++ +
Sbjct: 763 ASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLN----------------DIIR 806

Query: 507 MMIEKGQMPNETTYTILVEG 526
           M+++KG++     Y   V+G
Sbjct: 807 MLLQKGEIVKAGYYMSKVDG 826



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/518 (22%), Positives = 218/518 (42%), Gaps = 109/518 (21%)

Query: 135 SYTYLVNCLC--KKGNVGYAM----------------------------------QLVEK 158
           +Y  L++C C  ++ ++G A                                    L+ +
Sbjct: 167 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHR 226

Query: 159 MEDYGYPTNTVTYNSLVRGLC------------------------------------MLG 182
           M + G   +  +YN++++ LC                                    M G
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
            ++++    + ++QKG+VPN  TY+ ++ A  K R +  A  +L  +     +P+ V+Y 
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            ++ G    GR +EA + F+++  +G  P++V++N L+ SLC   R +EA E+   +   
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406

Query: 303 DRSPTIVTY-----------------------------------NILIGSLAYHGKTDHA 327
              P I++Y                                   NILI + A  G  D A
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
           L +  EM      P+  +Y  +IA LC  G++   ++ L QM     KPN   Y+ L   
Sbjct: 467 LLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQG 526

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            C  G + +A  ++  + ++    P   F+  +I SLC +G+   A  +   +   G  P
Sbjct: 527 FCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRP 586

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D +T++SLI G C+ G +++A  +   M     +PDV  ++ L+ G  KS R D  L +F
Sbjct: 587 DIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILF 646

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + M+ K   P   TY+++++G+        + ++  E+
Sbjct: 647 REMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEM 684



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 175/371 (47%), Gaps = 4/371 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDA 133
           R  +L DA  +L +M+S G KP+ V   +L+   C    + KA +++  M+  GI  P+ 
Sbjct: 494 RMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNI 553

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           + ++ +++ LC +G V  A  +   +   G   +  T+NSL+ G C++G ++++   LD 
Sbjct: 554 TFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDA 613

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++  G  P+  TYS L+   +K   +   + L  +++ K  KP  V+Y+++L GL + GR
Sbjct: 614 MVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGR 673

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A + F ++   G   ++ +Y I+L+ LC     +EA  L  ++   +    I   N 
Sbjct: 674 TSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNT 733

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I +L    + + A  +   +      P+A++Y  +I  L  EG V+        M    
Sbjct: 734 MIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTG 793

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+    N +  ML   G++ +A   +  +     S        +I+    KG+  +  
Sbjct: 794 CAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYRE-- 851

Query: 433 QLLYEMTKYGF 443
           Q+ +   KY F
Sbjct: 852 QIKFLPAKYQF 862



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 154/400 (38%), Gaps = 78/400 (19%)

Query: 222 AMKLLDDIIAKGGKPNLV-----SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE------ 270
           A+ L + I  +   P +V     +Y +L+   C+  R +    FF  L   G        
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 271 ------------------------------PNVVSYNILLRSLCMEGRWEEANELLAEMD 300
                                         P+  SYN +++SLC   R +EA ++L  M 
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 301 GGDR-SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            GD  SP +V+Y ++I  L   G+   A  + +EMV+    P+  +YN I+  LC    +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM--------------------------------- 386
           D     L QMF    +P+E TY  +                                   
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 387 ---LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC   + +EA  I  S+  K +      Y  ++     +G+      L + MT  G 
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             DS+ ++ LI      G+++EAL IF  M      P+V  +  ++  LC+  R   ++E
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
               MI  G  PN   Y  L++G     +L  + E++ E+
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEM 543


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 247/563 (43%), Gaps = 64/563 (11%)

Query: 20  RKAYGFYSQIPNLHSFSLNKGFIRVLASTQVT-ISPKDSVYTKPNRKPGNNNDTRHRDHK 78
           R A+ + + +  L    + +  + V A  Q    +P   VY            TR  +  
Sbjct: 140 RTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETL 199

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA       +++G +P+VV    L+   C    ++ A+ V E M  +G  P+  +YT 
Sbjct: 200 LSDA-------MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTE 252

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++  CK   +  AM L  +M D G   N VTY +L++G C  G L+ + + L  +   G
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           LVPN +T S L++A  K   V  A  LL  +I KG K N + Y  L+ GLCK GR   A 
Sbjct: 313 LVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R  + L S+GF P+  +Y+ L+  LC +    EA  +L +M      P+ VTY I+I  L
Sbjct: 373 RLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
                 D + K+LD+M+    +P   +Y   +   C EG+++     +  M      PN 
Sbjct: 433 VREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNL 492

Query: 379 GTYNGLAMLCGVGKV---------------------QEAFAIIQSLGNKQNSS------- 410
            TYN  A++CG   +                     +E++ ++  L  K+ SS       
Sbjct: 493 VTYN--ALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANS 550

Query: 411 ------------------------PQE--FYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                                   P E   Y   +TSLCR  +  +A  LL EM     T
Sbjct: 551 VSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLT 610

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P    Y+S+I   C   ++ EAL     M +  Y P ++++  ++  LC+      + +V
Sbjct: 611 PSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQV 670

Query: 505 FQMMIEKGQMPNETTYTILVEGI 527
           F  M+ K     E  + IL++G+
Sbjct: 671 FGDMLSKEYNYEEIAWRILIDGL 693



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 227/477 (47%), Gaps = 17/477 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  KL+ A +   RMV  G  P+VV  T L+   C   ++  A ++++ M +SG++P+  
Sbjct: 259 KSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEW 318

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L++ LCK   VG A  L+  +   G   N + Y SL+ GLC  G    + + +  L
Sbjct: 319 TCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTL 378

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G VP+A TYS L++   +++ +  AM +LDD++ KG +P+ V+Y +++  L +E   
Sbjct: 379 VSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGA 438

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + + +    + + G +P+V +Y I +RS C EGR E+A  ++  M      P +VTYN L
Sbjct: 439 DGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNAL 498

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE----------------GK 358
           I   A  G T  A      MV    +P+  SY  ++  L  +                 +
Sbjct: 499 ICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAE 558

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +  +   L++M   +       YN  L  LC V ++ EA  ++  + +   +  ++ Y  
Sbjct: 559 MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTS 618

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   CR     +A   +  M K G+ P   +Y  +I  LC EG I+ A ++F  M   +
Sbjct: 619 IIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKE 678

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           Y  +   +  L+ GL +         +  +M EK   P++  Y  L   I   ++++
Sbjct: 679 YNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQ 735



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 190/401 (47%), Gaps = 1/401 (0%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+N  C  G++  + + +  +   G+  ++  Y S V G C  G L  + +    +
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G V  AFTY+ LL        V  AM +   + A G  P+   Y  ++ GLC  GRT
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA     D  ++GFEPNVV YN L+   C  G  E A ++   MD    SP + TY  L
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       K D A+ +   MV     P+  +Y  +I   CS+G++D   + L  M +   
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PNE T + L   LC   +V EA  ++ SL  K     +  Y  +I  LC+ G+   A +
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+  +   GF PD++TYSSLI GLC +  + EA+ +   M E   +P    +  ++  L 
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +    D S ++   MI  G  P+  TYTI V    H+  +E
Sbjct: 434 REVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRME 474



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 206/441 (46%), Gaps = 1/441 (0%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
            L  ++  G  PD    T+ +   C+A  +  A ++  +M   G +  A +YT L++ LC
Sbjct: 94  HLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLC 153

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
             G V  AM +   M+  G   +   Y ++V GLC  G   ++   L   + +G  PN  
Sbjct: 154 GAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVV 213

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            Y+ L++       +  A+ + + +   G  PN+ +Y  L++G CK  + + A+  F  +
Sbjct: 214 VYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRM 273

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G  PNVV+Y  L++  C +G+ + A  LL  M+     P   T ++LI +L  H + 
Sbjct: 274 VDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERV 333

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A  +L  +++   + +   Y  +I  LC  G+     + +  +  +   P+  TY+ L
Sbjct: 334 GEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSL 393

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC   ++ EA  ++  +  K        Y  +I  L R+     + ++L +M   G 
Sbjct: 394 IDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI 453

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD +TY+  +R  C EG +E+A  + + M ++   P++  +NAL+ G      T  +  
Sbjct: 454 KPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFS 513

Query: 504 VFQMMIEKGQMPNETTYTILV 524
            F+ M+  G  PNE +YT+L+
Sbjct: 514 TFKHMVANGCKPNEESYTVLL 534



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 51/341 (14%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L++A L L+ M+ KG +P  V  T ++ +L +      + K+++ M+++GI PD  
Sbjct: 399 RQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVF 458

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  V   C +G +  A  ++  M D+G   N VTYN+L+ G   LG  +Q+      +
Sbjct: 459 TYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHM 518

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVH------------AAMKLLDDIIAKGGKPNLVS-- 240
           +  G  PN  +Y+ LL    K+   +            A MK L  ++ +  K  L S  
Sbjct: 519 VANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEI 578

Query: 241 --YNVLLTGLCKEGRTEEA-----------------------------------IRFFRD 263
             YN  LT LC+  R +EA                                   + F   
Sbjct: 579 DIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDS 638

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   G+ P + SY  ++ SLC EG  + A ++  +M   + +   + + ILI  L   G 
Sbjct: 639 MVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGY 698

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
                 +L  M +  +RPS A Y  +  ++     +  + +
Sbjct: 699 VAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQEIAR 739



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 135/343 (39%), Gaps = 36/343 (10%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L+ A      + A+ + L  ++  G  P+  +Y   + G C+ G    A R F
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +P +G      +Y  LL  LC  G   EA  + A M     +P    Y  ++  L   
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G+T  A  +L + +   F                                   +PN   Y
Sbjct: 191 GRTREAETLLSDAMAEGF-----------------------------------EPNVVVY 215

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N L    C VG ++ A  + + +     S     Y  +I+  C+  K  +A  L   M  
Sbjct: 216 NALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P+  TY++LI+G C +G ++ A  +   ME     P+    + L+  LCK  R   
Sbjct: 276 AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGE 335

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +  +   +I+KG   NE  YT L++G+        +  +++ L
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTL 378



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%)

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G +  +   + SL     +     Y   +   CR G    A +L   M   G    +
Sbjct: 83  CLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTA 142

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           +TY++L+ GLC  G++ EA+ +F  M+     PD   +  ++ GLC + RT  +  +   
Sbjct: 143 FTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSD 202

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            + +G  PN   Y  L++G  +  +LEL+ +V + + +
Sbjct: 203 AMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDV 240


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 231/463 (49%), Gaps = 3/463 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A    E++ + G  P+VV  T ++  L KA +++  +K  E M  S  +P  ++YT
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYT 437

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   +  A ++ E+M   G   +T+TY +L+ G      ++++ + LD ++ K
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P A TY  ++    K   ++ A +++  +  +G +P L  +  LL+    +GR EEA
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +   ++ ++G  P+V+ Y  L+  L   GR  EA  +   M     +P  +TY  +I +
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 617

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +  G  + A ++L+ M K    P   +YN ++       +VD      D+M     KPN
Sbjct: 618 FSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 677

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             T+N L   L   GK   AF++ + +  K    P    Y  +I  L + G+  +AF   
Sbjct: 678 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQF 737

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G  P+ +TY+SLI  L   G I EA ++   M +    PDV  ++AL+ GL  S
Sbjct: 738 QEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS 797

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGI-AHQDELELSA 537
              D + +VFQ M+++G  PNE TY +L  G  A    L+L A
Sbjct: 798 SMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEA 840



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 232/512 (45%), Gaps = 30/512 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL++A      M+ +G++P +    +L++ LCKA K+ +A ++ + +V+  +     +Y 
Sbjct: 209 KLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYN 268

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK G V   ++L+ +M +     +  TYN LV G      L+ +L+    L   
Sbjct: 269 SLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSY 328

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLD---DIIA----------------------- 231
           G  PNA TY+ +++  Y  + +  A    D   D+I+                       
Sbjct: 329 GCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEK 388

Query: 232 ---KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
               G  PN+V+Y  ++ GL K GR E+ ++ F D+      P   +Y +++  LC    
Sbjct: 389 LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQM 448

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             +A ++  +M      P  +TY  LI   +   K D A K+LD M+     P+A +Y  
Sbjct: 449 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 508

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQ 407
           I+   C    ++   + + QM  R C+P    +  L +     G+ +EA+ ++  +  + 
Sbjct: 509 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 568

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            +     Y  +I  L   G+  +A  +   M + G  PD+ TY ++I+     G +E A 
Sbjct: 569 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 628

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           EI  +M +    PD   +N+L+ G  K  R D +  V+  M+  G  PN  T+ +L+ G+
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVM 559
               + + +  + KE+  +  V  + V   ++
Sbjct: 689 FKDGKTDRAFSLFKEMLEKDEVPPTLVSYTIL 720



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 225/467 (48%), Gaps = 8/467 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++ A      M S G +P +V    ++  L   +KM +A K    M+ +G  PD  
Sbjct: 32  KARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVI 91

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++  CK G       L+ +      P +   Y S++ G C  G+L+   + L+ +
Sbjct: 92  AFTTLIHGFCKAGQPQVGHMLLNQALKRFRP-DVFLYTSVIHGYCKAGDLDTGFKILEEM 150

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G +P+A  Y  L++   K   V  A +L + +   G   + V++  L+  L   G+ 
Sbjct: 151 LAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKL 210

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   +R++  +G+EP +   + L+ +LC  G+ +EANE+   +     + + V YN L
Sbjct: 211 DEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSL 270

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G+ D  LK+L +MV+    P   +YN ++A      ++D  ++    +    C
Sbjct: 271 MDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGC 330

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPN  TY  +   L    +++EA A      +  +      Y  VI  L    +  +A +
Sbjct: 331 KPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVIS------YTTVIKGLADSKRIDEACE 384

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  ++   G +P+   Y+++I GL   G IE+ L+ F  M      P    +  ++ GLC
Sbjct: 385 LFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLC 444

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           K++    + +VF+ M++KG +P+  TYT L++G +   +++ + ++L
Sbjct: 445 KAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 491



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 225/515 (43%), Gaps = 65/515 (12%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           K  +PDV   T++++  CKA  +    K++E M+++G IPDA++Y  L++ LCK G V  
Sbjct: 118 KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP---------- 201
           A +L E+M   G   + VT+ +L+  L   G L+++ +    +I++G  P          
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 202 -------------------------NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
                                    +   Y+ L++   K   V   +KLL  ++     P
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN------------------------ 272
           ++ +YN+L+ G  +  R ++A+  F+ L S G +PN                        
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357

Query: 273 -----VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
                V+SY  +++ L    R +EA EL  ++     SP +V Y  +I  L   G+ +  
Sbjct: 358 DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDG 417

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
           LK  ++M      P+  +Y  +I  LC    +    K  +QM  + C P+  TY  L   
Sbjct: 418 LKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDG 477

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
                K+ EA  ++  +  K        Y  ++   C+     +A +++ +M + G  P 
Sbjct: 478 FSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPG 537

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            + ++SL+     +G  EEA ++   M      PDV  + +L+  L  + R   +  VF 
Sbjct: 538 LFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFD 597

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
            MIEKG  P+  TY  +++  +    +E + E+L+
Sbjct: 598 SMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 632



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 205/422 (48%), Gaps = 8/422 (1%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           M++A+  ++ M ++G++PD  +   ++N LCK   +  A++L  +M   G     V+YN+
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           ++ GL  +  ++++ +F + +I  G  P+   ++ L+    K         LL+  + K 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KR 119

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            +P++  Y  ++ G CK G  +   +   ++ + G  P+  +Y +L+  LC  GR +EA 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           EL   M         VT+  LI +L+ HGK D A ++  EM++  + P     + +I  L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C  GKVD   +    +  ++   +   YN L    C +G+V +   ++  +    N    
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
           + Y  ++    R  +   A +L   ++ YG  P++ TY+++I+GL     +EEA   F  
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF-- 357

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
               D   DV ++  ++ GL  S+R D + E+F+ +   G  PN   YT +++G+     
Sbjct: 358 ----DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413

Query: 533 LE 534
           +E
Sbjct: 414 IE 415



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 153/350 (43%), Gaps = 37/350 (10%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+   +++ + G  P+VV+ NI+L  LC   + ++A EL  EM      PTIV+YN +
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 315 IGSLAYHGKTDHALKVLDEMVKG----------------------------------RFR 340
           I  LA   K D A K  + M+                                    RFR
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI 399
           P    Y  +I   C  G +D   K L++M    C P+   Y  L   LC +G+V EA+ +
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            + +           +  +I +L   GK  +A +L  EM + G+ P      SLI  LC 
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCK 241

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G ++EA EI+  +           +N+L+ G CK  R D  L++   M+E    P+  T
Sbjct: 242 AGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQT 301

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ--YDFEGIE 567
           Y ILV G +  + L+ + E+ K L        +A    ++Q  YD + +E
Sbjct: 302 YNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRME 351


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 227/445 (51%), Gaps = 3/445 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+   C  NK+ +AI ++  M      PD  SY  +++ LCKKG +  A  L+  M++ G
Sbjct: 54  LICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 113

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  T+N LV G C LG L ++ + +D + +  ++P+  TY+ L+    K+  +  A 
Sbjct: 114 LFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAF 173

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L D++      P++V+YN+L+ G  +   + +      ++  KG +PN V+YN++++  
Sbjct: 174 RLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWY 233

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             EG+ + A   L +M+    SP  VT+N L       G+   A +++DEM +   + ++
Sbjct: 234 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNS 293

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
            + N I+  LC E K+D   K L     R    +E +Y  L M  G  KV ++      +
Sbjct: 294 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIM--GYFKVGKS-XXWDEM 350

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
             K+       Y  +I  LCR GKT Q+     E+ + G  PD  TY+++I G C EG +
Sbjct: 351 KEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQV 410

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           ++A      M +  +KPD+   N L+ GLC     D +L++F+  I KG+  +  T+  +
Sbjct: 411 DKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTI 470

Query: 524 VEGIAHQDELELSAEVLKELQLRQV 548
           + G+  +   E + ++L E++ +++
Sbjct: 471 ISGLCEEGRFEEAFDLLAEMEEKKL 495



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 222/450 (49%), Gaps = 7/450 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  KLN+A   L  M + G  P+      L+   CK   +K+A +V+++M  + ++
Sbjct: 91  DVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVL 150

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L+  LCK G +  A +L ++ME+     + VTYN L+ G     +  +  + 
Sbjct: 151 PDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFEL 210

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +  KG+ PNA TY+ +++   KE  +  A   L  +   G  P+ V++N L  G CK
Sbjct: 211 IDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCK 270

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA R   ++  KG + N V+ N +L +LC E + ++A +LL+           V+
Sbjct: 271 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI      GK+       DEM +    PS  +Y  +I  LC  GK D  +   +++ 
Sbjct: 331 YGTLIMGYFKVGKS----XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELL 386

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY-KYVITSLCRKGKT 428
                P++ TYN + +  C  G+V +AF     +  K++  P  F    ++  LC +G  
Sbjct: 387 ESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM-VKKSFKPDLFTCNILVRGLCTEGML 445

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A +L       G   D+ T++++I GLC EG  EEA ++   MEE    PD    NA+
Sbjct: 446 DKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAI 505

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
           L  L  + R   + E    ++E+G++ ++T
Sbjct: 506 LSALADAGRMKEAEEFMSGIVEQGKLQDQT 535



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 224/466 (48%), Gaps = 5/466 (1%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           ++KL++A   + +M      PD V    +L  LCK  K+ +A  ++  M ++G+ P+ ++
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  LV+  CK G +  A ++++ M       +  TY +L+ GLC  G ++++ +  D + 
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              L+P+  TY+ L+   ++        +L+D++  KG KPN V+YNV++    KEG+ +
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A    R +   GF P+ V++N L    C  GR  EA  ++ EM         VT N ++
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            +L    K D A K+L    K  +     SY  +I      GK        D+M  +   
Sbjct: 301 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXX----WDEMKEKEII 356

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  TY  +   LC  GK  ++      L        Q  Y  +I   CR+G+  +AF  
Sbjct: 357 PSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHF 416

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M K  F PD +T + L+RGLC EG++++AL++F          D   FN ++ GLC+
Sbjct: 417 RNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCE 476

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             R + + ++   M EK   P+  T+  ++  +A    ++ + E +
Sbjct: 477 EGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFM 522



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 187/373 (50%), Gaps = 5/373 (1%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   NT T+N L+ G C+   L++++  + ++      P+  +Y+ +L+   K+  ++ A
Sbjct: 43  GVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEA 102

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             LL D+   G  PN  ++N+L++G CK G  +EA      +      P+V +Y  L+  
Sbjct: 103 RDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGG 162

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC +G+ +EA  L  EM+     P +VTYN+LI        +    +++DEM     +P+
Sbjct: 163 LCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPN 222

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
           A +YN ++     EGK+D     L +M      P+  T+N L+   C  G++ EAF ++ 
Sbjct: 223 AVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMD 282

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  K           ++ +LC + K   A++LL   +K G+  D  +Y +LI G    G
Sbjct: 283 EMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVG 342

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
                 E    M+E +  P +  +  ++ GLC+S +TD S++    ++E G +P++TTY 
Sbjct: 343 KSXXWDE----MKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYN 398

Query: 522 ILVEGIAHQDELE 534
            ++ G   + +++
Sbjct: 399 TIILGYCREGQVD 411



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 197/438 (44%), Gaps = 55/438 (12%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+++AF   + M +    P VV    L+    + +   K  ++++ M   G+ P+A 
Sbjct: 165 KDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAV 224

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V    K+G +  A   + KME+ G+  + VT+N+L  G C  G L+++ + +D +
Sbjct: 225 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEM 284

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG------------------GK- 235
            +KGL  N+ T + +L     ER +  A KLL     +G                  GK 
Sbjct: 285 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS 344

Query: 236 ------------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                       P++++Y  ++ GLC+ G+T+++I    +L   G  P+  +YN ++   
Sbjct: 345 XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGY 404

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C EG+ ++A     +M      P + T NIL+  L   G  D ALK+    +       A
Sbjct: 405 CREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDA 464

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQS 402
            ++N II+ LC EG+ +     L +M  ++  P+  T+N  L+ L   G+++EA   +  
Sbjct: 465 VTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSG 524

Query: 403 L---GNKQNSS-------------------PQEF-YKYVITSLCRKGKTYQAFQLLYEMT 439
           +   G  Q+ +                   P    +   I  LC +GK   A  ++ E T
Sbjct: 525 IVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQEST 584

Query: 440 KYGFTPDSYTYSSLIRGL 457
           + G      TY SL+ GL
Sbjct: 585 QKGIILHKSTYISLMEGL 602



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 154/332 (46%), Gaps = 4/332 (1%)

Query: 199 LVPNAFTYSFLLEAAYK---ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           L PN  T + L++A  +   +  V+ +  +  D+I  G + N  ++N+L+ G C E +  
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EAI     +      P+ VSYN +L  LC +G+  EA +LL +M      P   T+NIL+
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G    A +V+D M +    P   +Y  +I  LC +GK+D   +  D+M + +  
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 376 PNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  TYN L   C       + F +I  +  K        Y  V+    ++GK   A   
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L +M + GF+PD  T+++L  G C  G + EA  +   M     K +    N +L  LC 
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 305

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            R+ D + ++     ++G   +E +Y  L+ G
Sbjct: 306 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMG 337


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 234/473 (49%), Gaps = 6/473 (1%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D +L+DA      M      P +++ + LL  + K NK    I   E M   GI  +  +
Sbjct: 56  DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L+NC C+   +  A+ L+ KM   GY  + VT NSL+ G C    ++ ++  +D+++
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  T++ L+   +       A+ L+D ++ +G +P+LV+Y  ++ GLCK G T+
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+     + +   E NVV Y+ ++ SLC     ++A  L  EM+     P ++TY+ LI
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L  +G+   A ++L +M++ +  P+  +++ +I     +GK+    K  ++M  R   
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN  TY+ L    C + ++ EA  +++ +  K        Y  +I   C+  +  +  +L
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM++ G   ++ TY++LI G       + A  +F  M      P++  +N LL GLCK
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS-----AEVLKE 542
           + +   ++ VF+ +      P+  TY I++EG+    + ++      A  LKE
Sbjct: 476 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALKE 528



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 201/431 (46%), Gaps = 34/431 (7%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           ++  AI +  +M  S   P    ++ L++ + K       +   EKME  G   N  TYN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            L+   C    L+ +L  L ++++ G  P+  T + LL        +  A+ L+D ++  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KP+ V++  L+ GL    +  EA+     +  +G +P++V+Y  ++  LC  G  + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL +M+       +V Y+ +I SL  +   D AL +  EM     RP+  +Y+ +I+ 
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           LC+ G+     + L  M  R+  PN  T++ L                            
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSAL---------------------------- 329

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                 I +  +KGK  +A +L  EM K    P+ +TYSSLI G CM   + EA ++  +
Sbjct: 330 ------IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M   D  P+V  +N L+ G CK++R D  +E+F+ M ++G + N  TYT L+ G     +
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443

Query: 533 LELSAEVLKEL 543
            + +  V K++
Sbjct: 444 CDNAQMVFKQM 454



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 173/383 (45%), Gaps = 1/383 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ ++     + Q    P+   +S LL A  K       +   + +   G   NL +YN+
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C+  R   A+     +   G+EP++V+ N LL   C   R  +A  L+ +M    
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P  VT+  LI  L  H K   A+ ++D MV+   +P   +Y  ++  LC  G  DL +
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 364 KCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
             L++M   + + N   Y+  +  LC      +A  +   + NK        Y  +I+ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C  G+   A +LL +M +    P+  T+S+LI     +G + +A +++  M +    P++
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +++L+ G C   R   + ++ ++MI K  +PN  TY  L+ G      ++   E+ +E
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418

Query: 543 LQLRQVVSESAVERLVMQYDFEG 565
           +  R +V  +     ++   F+ 
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQA 441


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 234/499 (46%), Gaps = 38/499 (7%)

Query: 86  LERMVSKGHKPDVVQATNL-LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           L RM   G  P    + N+ +  + +A +   A++V + M    ++P+  +Y  +++   
Sbjct: 2   LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 61

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K G++    +L ++M  +G   N +TYN L+ GLC  G + ++   LD +  + +VP+ F
Sbjct: 62  KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 121

Query: 205 TYSFL-----------------------------------LEAAYKERGVHAAMKLLDDI 229
           TYS L                                   L    K+  V  A ++L  +
Sbjct: 122 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 181

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +  G  P  V YN L+ G C+ G  E A   F  + S+  +P+ ++YN L+  LC   R 
Sbjct: 182 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 241

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
             A +LL EM     +PT+ T+N LI +    G+ +    VL EM +   +P+  SY  I
Sbjct: 242 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 301

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQN 408
           +   C  GK+   V  LD MFH+   PN   YN +       G   +AF +++ + +   
Sbjct: 302 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 361

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           S     Y  +I  LC + +  +A +++  ++ +   PD+ +Y++LI   C  G I++AL+
Sbjct: 362 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 421

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   M +Y  K  V  ++ L+ GL  + R +    ++Q M++   +P+   + I+VE  +
Sbjct: 422 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 481

Query: 529 HQDELELSAEVLKELQLRQ 547
                E+ AE L++  L++
Sbjct: 482 KYGN-EIKAEDLRKEMLQK 499



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 187/411 (45%), Gaps = 1/411 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L   F   ++MV  G KP+ +    LL  LC+A +M +   +++ M S  ++
Sbjct: 58  DGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV 117

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L + L + G+    + L  K    G      T + L+ GLC  G ++ + + 
Sbjct: 118 PDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 177

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  L+  GLVP    Y+ L+    +   +  A      + ++  KP+ ++YN L+ GLCK
Sbjct: 178 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 237

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R   A     ++   G  P V ++N L+ +    G+ E+   +L+EM      P +V+
Sbjct: 238 AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 297

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  ++ +   +GK   A+ +LD+M      P+A  YN II      G  D     +++M 
Sbjct: 298 YGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 357

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                P+  TYN L   LC   ++ EA  II SL N +       Y  +I++ C +G   
Sbjct: 358 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 417

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +A  L   M KYG      TY  LI GL   G + E   ++  M + +  P
Sbjct: 418 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVP 468



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 146/308 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K++ A   L+ +V+ G  P  V    L+   C+  +++ A      M S  I PD  
Sbjct: 167 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 226

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK   +  A  L+ +M+D G      T+N+L+      G L +    L  +
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL PN  +Y  ++ A  K   +  A+ +LDD+  K   PN   YN ++    + G  
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 346

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      + S G  P++V+YN+L++ LC + +  EA E++  +      P  V+YN L
Sbjct: 347 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 406

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +  Y G  D AL +   M K   + +  +Y+ +I+ L   G+++ +     +M     
Sbjct: 407 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 466

Query: 375 KPNEGTYN 382
            P+   +N
Sbjct: 467 VPSNAIHN 474



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 114/229 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L   F+ L  M   G KP+VV   +++   CK  K+ +A+ +++ M    ++
Sbjct: 268 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 327

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A  Y  +++   + G    A  LVEKM+  G   + VTYN L++GLC    ++++ + 
Sbjct: 328 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 387

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++ L    L+P+A +Y+ L+ A      +  A+ L   +   G K  + +Y+ L++GL  
Sbjct: 388 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 447

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            GR  E    ++ +      P+   +NI++ +    G   +A +L  EM
Sbjct: 448 AGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 212/412 (51%), Gaps = 2/412 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ + + A      M + G  PDV     L+   C+A ++++A++  + M    + PD  
Sbjct: 241 RNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVV 300

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S++ L+    ++G + +A + + +M ++G   + V Y  ++ G C  G + ++L+  D +
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G +P+  TY+ LL    KER +  A +LL+++  +G  P+L ++  L+ G C++G  
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI 420

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A++FF  +  +   P++V+YN L+  +C +G   +ANEL  +M   +  P  VTY+IL
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I S    G+ D+A   LDEMV     P+  +YN II   C  G V    + L +M H + 
Sbjct: 481 IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN L       GK+ EAF +++ + N+        Y  +I+     G   +A  
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           +  +M   G  PD YTY S+I G  + G  +++ ++   M +    PD D F
Sbjct: 601 VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD-DKF 651



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 214/449 (47%), Gaps = 5/449 (1%)

Query: 83  FLQLERMVSKGHK----PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           F +++ ++S+  K    PDVV    ++    +A  ++ A+ +++ MVS GI P   +Y  
Sbjct: 175 FGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNS 234

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++  L + G    A ++   M+  G   +  ++N L+ G C  G L ++L+F   +  + 
Sbjct: 235 VLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRR 294

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+  ++S L+    +   +  A + L ++   G  P+ V Y +++ G C+ G   EA+
Sbjct: 295 VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEAL 354

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R   ++ + G  P+VV+YN LL  LC E R  +A ELL EM      P + T+  LI   
Sbjct: 355 RVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGY 414

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  + AL+  D +   R RP   +YN +I  +C +G +    +  D M  R   PN 
Sbjct: 415 CRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNH 474

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ L    C  G+V  AFA +  + NK        Y  +I   CR G   +  Q L +
Sbjct: 475 VTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPK 534

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M      PD  TY++LI G   EG + EA  +  +ME  + +PD   +N ++ G      
Sbjct: 535 MRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGN 594

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEG 526
              +  V++ M  +G  P+  TY  ++ G
Sbjct: 595 MQEADWVYKKMGARGIEPDRYTYMSMING 623



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 221/448 (49%), Gaps = 1/448 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D R R   +  A   ++ MVSKG KP +V   ++L  L +  +  KA +V   M + G+ 
Sbjct: 202 DARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVA 261

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  S+  L+   C+ G +  A++  ++M       + V+++ L+      G ++ + ++
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + + GL+P+   Y+ ++    +   +  A+++ D+++A G  P++V+YN LL GLCK
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK 381

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           E R  +A     ++  +G  P++ ++  L+   C +G  E+A +    +      P IVT
Sbjct: 382 ERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT 441

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  +   G    A ++ D+M      P+  +Y+ +I   C +G+VD     LD+M 
Sbjct: 442 YNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV 501

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           ++   PN  TYN +    C  G V +    +  + + +       Y  +I    ++GK +
Sbjct: 502 NKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMH 561

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +AF LL  M      PD+ TY+ +I G  + G ++EA  ++  M     +PD   + +++
Sbjct: 562 EAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMI 621

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
            G   +  +  S ++   M++KG  P++
Sbjct: 622 NGHVVAGNSKKSFQLHDEMLQKGLAPDD 649



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 187/383 (48%), Gaps = 34/383 (8%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           NT T N +V   C      +    +  + ++ + P+  T++ +++A ++   V AAM L+
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           D +++KG KP LV+YN +L GL + GR ++A   FR + + G  P+V S+N+L+   C  
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G  EEA     EM G   +P +V+++ LIG     G+ DHA + L EM +    P    Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
             +I   C  G +   ++  D+M    C P+  TYN L                      
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL---------------------- 375

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                       +  LC++ +   A +LL EM + G  PD  T+++LI G C +G IE+A
Sbjct: 376 ------------LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L+ F  + +   +PD+  +N L+ G+C+      + E++  M  +   PN  TY+IL++ 
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS 483

Query: 527 IAHQDELELSAEVLKELQLRQVV 549
              + +++ +   L E+  + +V
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIV 506



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 75/145 (51%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  ++ +  R G    A  L+  M   G  P   TY+S+++GL   G  ++A E+F  M+
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD 256

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
                PDV +FN L+ G C++   + +L  ++ M  +   P+  +++ L+     + E++
Sbjct: 257 ACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMD 316

Query: 535 LSAEVLKELQLRQVVSESAVERLVM 559
            +AE L+E++   ++ +  +  +V+
Sbjct: 317 HAAEYLREMREFGLMPDGVIYTMVI 341


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 219/444 (49%), Gaps = 1/444 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +++  F  L + +  G +P +V  T L+  L K  K  +A+++ + MV+ G  PD  +Y
Sbjct: 24  QRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTY 83

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T ++N LCK G    A  L +KME+ G   N VTY++L+  LC    +N++L     +  
Sbjct: 84  TTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKA 143

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           K + P  FTY+ L++          A  LL+++ +    PN+V++NVL+   CKEG+   
Sbjct: 144 KDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLA 203

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A    + +   G EP+VV+YN L+    M     EA +L   M      P + +Y+ILI 
Sbjct: 204 AEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILIN 263

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D A ++ +EM+     P+  SYN +I  LC  G++         M      P
Sbjct: 264 GYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLP 323

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TY  L    C  G + +AF + +++ +         Y  ++ ++C+ G    A +L 
Sbjct: 324 NLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELF 383

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            E+   G  P+   Y+++I GLC EGL++EALE F  ME+    PD  ++N ++ G  + 
Sbjct: 384 SELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQH 443

Query: 496 RRTDLSLEVFQMMIEKGQMPNETT 519
           +    ++ +   M ++G + +  T
Sbjct: 444 KDESRAVHLIGEMRDRGFITDAGT 467



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 227/463 (49%), Gaps = 3/463 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P+      L+   C+  ++     V+   +  G+ P   ++T L+N L K G    A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           ++L + M   G   +  TY +++ GLC +G    +     ++ + G   N  TYS L+ +
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K R V+ A+ +   + AK   P + +Y  L+ GLC   R +EA     ++ S    PN
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV++N+L+ + C EG+   A  +L  M      P +VTYN L+   +   +   A K+ D
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
            M+    +P   SY+ +I   C   ++D   +  ++M H+   PN  +YN L   LC +G
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           +++EA  + +++    N      Y  ++   C++G   +AF+L   M      P+   Y+
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            L+  +C  G +++A E+F  +     +P+V  +  ++ GLCK    D +LE F+ M + 
Sbjct: 365 ILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDD 424

Query: 512 GQMPNETTYTILVEG-IAHQDELELSAEVLKELQLRQVVSESA 553
           G  P+E +Y +++ G + H+DE   +  ++ E++ R  ++++ 
Sbjct: 425 GCPPDEFSYNVIIRGFLQHKDE-SRAVHLIGEMRDRGFITDAG 466



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 204/420 (48%), Gaps = 3/420 (0%)

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
           +G+ P+  +   L+NC C+   V     ++ K    G     VT+ +L+ GL  +G   Q
Sbjct: 4   AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +++  D ++ +G  P+ +TY+ ++    K      A  L   +   G + N+V+Y+ L+ 
Sbjct: 64  AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            LCK  R  EA+  F  + +K   P + +Y  L++ LC   RW+EA+ LL EM   +  P
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            +VT+N+L+ +    GK   A  VL  M +    P   +YN ++       +V    K  
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR 424
           D M  + CKP+  +Y+ L    C   ++ EA  +   + + Q S+P    Y  +I  LC+
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIH-QGSTPNNVSYNTLIHGLCQ 302

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G+  +A  L   M   G  P+ YTY+ L+ G C +G + +A  +F  M+    KP++  
Sbjct: 303 LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 362

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N L+  +CKS     + E+F  +   G  PN   YT ++ G+  +  L+ + E  + ++
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 422



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 188/390 (48%), Gaps = 9/390 (2%)

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           ME  G   NT T N L+   C L  ++     L + I+ GL P   T++ L+    K   
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
              A++L DD++A+G +P+  +Y  ++ GLCK G T  A   F+ +   G + NVV+Y+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+ SLC   R  EA ++ + M   D SPTI TY  LI  L    +   A  +L+EM    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQ 394
             P+  ++N ++   C EGKV      L  M     +P+  TYN    G +M   V + +
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 395 EAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           + F ++ + G K    P  F Y  +I   C+  +  +A QL  EM   G TP++ +Y++L
Sbjct: 241 KLFDVMITKGCK----PDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTL 296

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I GLC  G + EA ++F  M      P++  +  LL G CK      +  +F+ M     
Sbjct: 297 IHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYL 356

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            PN   Y ILV  +     L+ + E+  EL
Sbjct: 357 KPNLVMYNILVNAMCKSGNLKDARELFSEL 386



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 140/275 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++ K+  A   L+ M   G +PDVV   +L+Y      ++ +A K+ ++M++ G  
Sbjct: 193 DTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCK 252

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SY+ L+N  CK   +  A QL  +M   G   N V+YN+L+ GLC LG L ++   
Sbjct: 253 PDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDL 312

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G +PN +TY+ LL+   K+  +  A +L   + +   KPNLV YN+L+  +CK
Sbjct: 313 FKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCK 372

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A   F +L   G +PNV  Y  ++  LC EG  +EA E    M+     P   +
Sbjct: 373 SGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFS 432

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           YN++I     H     A+ ++ EM    F   A +
Sbjct: 433 YNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 230/485 (47%), Gaps = 22/485 (4%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA---------------IKVM 121
           HKL+ +     ++   G +PDVV    LL+ LC  +++ +A               + + 
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
           + MV  G+ P   ++  L+N LC +G V  A  LV KM   G   + VTY ++V G+C +
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           G+   +L  L ++ +  + P+   YS +++   K+     A  L  +++ KG  PN+ +Y
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           N ++ G C  GR  +A R  RD+  +   P+V+++N L+ +   EG+  EA +L  EM  
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P  VTYN +I     H + D A  + D M      P   ++N II   C   +VD 
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDE 450

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            ++ L ++  R    N  TYN L    C V  +  A  + Q + +            ++ 
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
             C   K  +A +L   +       D+  Y+ +I G+C    ++EA ++F  +  +  +P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570

Query: 481 DVDNFNALLLGLC-KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           DV  +N ++ G C KS  +D ++ +F  M + G  P+ +TY  L+ G     E++ S E+
Sbjct: 571 DVQTYNVMISGFCGKSAISDANV-LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629

Query: 540 LKELQ 544
           + E++
Sbjct: 630 ISEMR 634



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 227/490 (46%), Gaps = 18/490 (3%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L+DA    + MV        V    ++    + N+   AI +   M    I  + 
Sbjct: 82  HYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNI 141

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL----- 188
            S+  L+ C C    + +++    K+   G+  + VT+N+L+ GLC+   ++++L     
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201

Query: 189 ----------QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
                        D++++ GL P   T++ L+     E  V  A  L++ ++ KG   ++
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+Y  ++ G+CK G T+ A+     +     +P+VV Y+ ++  LC +G   +A  L +E
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M     +P + TYN +I      G+   A ++L +M++    P   ++N +I+    EGK
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           +    K  D+M HR   P+  TYN  +M+ G  K    F   + + +   S     +  +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYN--SMIYGFCK-HNRFDDAKHMFDLMASPDVVTFNTI 438

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I   CR  +  +  QLL E+++ G   ++ TY++LI G C    +  A ++F  M  +  
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PD    N LL G C++ + + +LE+F+++       +   Y I++ G+    +++ + +
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558

Query: 539 VLKELQLRQV 548
           +   L +  V
Sbjct: 559 LFCSLPIHGV 568



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 203/498 (40%), Gaps = 90/498 (18%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +  AI   + MV S     A     ++    +      A+ L  KME    P N  ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L++  C    L+ SL    +L + G                                   
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGF---------------------------------- 172

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF---------------EPNVVSYNI 278
            +P++V++N LL GLC E R  EA+  F  +   GF                P V+++N 
Sbjct: 173 -QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+  LC+EGR  EA  L+ +M G      +VTY  ++  +   G T  AL +L +M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
            +P    Y+ II RLC +G          +M  +   PN  TYN +    C  G+  +A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +++ +  ++ +     +  +I++  ++GK ++A +L  EM      PD+ TY+S+I G 
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNA------------------------------ 487
           C     ++A  +F +M      PDV  FN                               
Sbjct: 412 CKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467

Query: 488 -----LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
                L+ G C+    + + ++FQ MI  G  P+  T  IL+ G    ++LE + E+ + 
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527

Query: 543 LQLRQVVSESAVERLVMQ 560
           +Q+ ++  ++    +++ 
Sbjct: 528 IQMSKIDLDTVAYNIIIH 545



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 139/285 (48%), Gaps = 7/285 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL +A    + M+ +   PD V   +++Y  CK N+   A  + ++M S    PD  
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 433

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  +++  C+   V   MQL+ ++   G   NT TYN+L+ G C + NLN +      +
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I  G+ P+  T + LL    +   +  A++L + I       + V+YN+++ G+CK  + 
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F  LP  G EP+V +YN+++   C +    +AN L  +M      P   TYN L
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN---PIIARLCSE 356
           I      G+ D +++++ EM    F   A +      II R+  E
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDE 658



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 152/351 (43%), Gaps = 5/351 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D   +DA      M+ KG  P+V     ++   C   +   A +++  M+   I PD  
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++   K+G +  A +L ++M       +TVTYNS++ G C     + +    D +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                 P+  T++ +++   + + V   M+LL +I  +G   N  +YN L+ G C+    
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F+++ S G  P+ ++ NILL   C   + EEA EL   +         V YNI+
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +    K D A  +   +      P   +YN +I+  C +  +        +M     
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603

Query: 375 KPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           +P+  TYN L   C   G++ ++  +I  + +   S      K     +CR
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 158/390 (40%), Gaps = 32/390 (8%)

Query: 184 LNQSLQFLDRLIQKGL--VPNAFTYSFLLEAAYKERGVHAAMKLLDDII-----AKGGKP 236
           LN       R+ +KG   +P+    +F  E    + G H   K LDD I         +P
Sbjct: 44  LNSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHY-FKSLDDAIDFFDYMVRSRP 102

Query: 237 --NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
               V  N ++    +  R + AI  +R +  +    N+ S+NIL++  C   +   +  
Sbjct: 103 FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLS 162

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
              ++      P +VT+N L+  L    +   AL +   MV+  F  + A +        
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF-------- 214

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE 413
                       DQM      P   T+N L   LC  G+V EA A++  +  K       
Sbjct: 215 ------------DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  ++  +C+ G T  A  LL +M +    PD   YS++I  LC +G   +A  +F  M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            E    P+V  +N ++ G C   R   +  + + MIE+   P+  T+  L+     + +L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382

Query: 534 ELSAEVLKELQLRQVVSESAVERLVMQYDF 563
              AE L +  L + +    V    M Y F
Sbjct: 383 -FEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 231/477 (48%), Gaps = 34/477 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + +AF  L    S+G +P ++    +LY LCK  K  +A  V+  M+  G+ P+A+
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+  +C++ N+  A ++ ++M   G   + V+++SL+  L   G+L Q+L     +
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+VP+   Y+ L++   +   +  A+K+ D+++A+G   ++V+YN  L GLCK+   
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A   F ++  +G  P+  ++  L+R  C +G  ++A  L   M   +  P  VTYN L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G+   A ++ D+M++    P   SY  ++   CS G +   +   DQM  +  
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           +PN  T N L                                  I   CR G   +A++ 
Sbjct: 604 RPNLVTCNTL----------------------------------IKGYCRSGDMPKAYEY 629

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L +M   G  PDS++Y++LI G   E  +E+A  +   ME+   + ++  +N +L G C 
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             +   + +V + MIE G  P+  TY+ L+ G   QD ++ +     E+  R +V +
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 229/499 (45%), Gaps = 24/499 (4%)

Query: 75  RDHKLNDAFLQLERMVSKG--HKPDVVQA----------TNLLYDL-----CKANKMKKA 117
           R  +L++A   + RMV K    +  VV++            L+YDL      +A K+++ 
Sbjct: 147 RGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREG 206

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
            +  +++   G+    ++   L+  L + G V  A ++  ++   G   N  T N +V  
Sbjct: 207 SEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNA 266

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           LC        + FL  +  KG+  +  TY+ L+ A  +E  V  A +LL+   ++G +P 
Sbjct: 267 LCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPG 326

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           L++YN +L GLCK G+ + A     ++   G  PN  +YN LL  +C      EA E+  
Sbjct: 327 LLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFD 386

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           EM      P +V+++ LIG LA +G    AL    EM +    P    Y  +I   C  G
Sbjct: 387 EMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNG 446

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK--QNSSPQEFY 415
            +   +K  D+M  R C  +  TYN    L G+ K ++ FA    L N+  +     +FY
Sbjct: 447 ALSDALKMRDEMLARGCFMDVVTYN--TFLNGLCK-KKMFADADMLFNEMVERGMVPDFY 503

Query: 416 KY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            +  +I   C+ G   +A  L   M +    PD  TY++LI G C  G +  A E++  M
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
              D  PD  ++  +L G C S     +L +   M+EKG  PN  T   L++G     ++
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623

Query: 534 ELSAEVLKELQLRQVVSES 552
             + E L ++    ++ +S
Sbjct: 624 PKAYEYLSKMISNGIIPDS 642



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 126/284 (44%), Gaps = 34/284 (11%)

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y++L+R+     +  E +E    +     S +I   N L+G L   G  D A ++  E+V
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +G    +  + N ++  LC + K + V+  L  M        EG              + 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM--------EG--------------KG 287

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
            FA I +            Y  +I + CR+G   +AFQLL   +  G  P   TY++++ 
Sbjct: 288 VFADIVT------------YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILY 335

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GLC  G  + A ++ + M +    P+   +N LL+ +C+      + E+F  M  +G +P
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           +  +++ L+  +A    L  +    +E++   +V ++ +  +++
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILI 439


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 235/489 (48%), Gaps = 28/489 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   + +M   G  P V+  T L+   CK ++   A ++ EMM  +G+ PD  
Sbjct: 416 QDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ 475

Query: 135 SYTYLVNCLCKKGNVGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +Y  L + LCK G    A   LV K    G     VTY SLV G    GN + +   +++
Sbjct: 476 AYNVLTHALCKSGRAEEAYSFLVRK----GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK 531

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ +G   +++TYS LL+A  K++ ++ A+ +LD +   G K N+V+Y ++++ + KEG+
Sbjct: 532 MVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGK 591

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F ++ S G +P+  +Y + + S C  G+ EEA  L+ EM+    +P +VTYN+
Sbjct: 592 HDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNV 651

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR----------------LCSEG 357
            I    + G  D A   L  M+     P+  +Y  ++                  + +  
Sbjct: 652 FINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWI 711

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           ++D V + L++M      P   TY+ + A  C   +++EA  +   +  K  S  +E Y 
Sbjct: 712 ELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYT 771

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV-VMEE 475
            +I   C      +A   + +M ++GF P   +Y  LI GLC EG  ++A  +F  ++  
Sbjct: 772 MLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGM 831

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
            DY  +   +  L  GL K+   D   ++   M  +    +  TY+++ + I      E 
Sbjct: 832 EDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNIH-----EA 886

Query: 536 SAEVLKELQ 544
           S  V+ EL+
Sbjct: 887 SGSVVSELR 895



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 249/572 (43%), Gaps = 67/572 (11%)

Query: 23  YGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDA 82
           YG   + P+     LN   +R    T +T +   + Y K  R              ++DA
Sbjct: 273 YGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAER--------------IDDA 318

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
                 M+S   K D+     L+  L K  + K+A + +  M ++G+ P+   YT +++ 
Sbjct: 319 LRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDG 378

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            CK G VG A+++   ME  G   N  TY+SL+ GL     L++++  + ++ + G+ P 
Sbjct: 379 YCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 438

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF- 261
             TY+ L++   K+     A +L + +   G  P+  +YNVL   LCK GR EEA  F  
Sbjct: 439 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLV 498

Query: 262 -------------------------------RDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
                                            + ++G + +  +Y++LL++LC + +  
Sbjct: 499 RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLN 558

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           EA  +L +M        IV Y I+I  +   GK DHA  + +EM+    +PSA +Y   I
Sbjct: 559 EALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFI 618

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNS 409
           +  C  G+++     + +M      P+  TYN     CG +G +  AF+ ++ + +   S
Sbjct: 619 SSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDA--S 676

Query: 410 SPQEFYKYVI------------------TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
               ++ Y I                  + +    +    +QLL  M K+G  P + TYS
Sbjct: 677 CEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYS 736

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           S+I G C    +EEA  +F  M   D  P+ + +  L+   C  +    ++     MIE 
Sbjct: 737 SIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEF 796

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           G  P+  +Y  L+ G+  + + + +  +  +L
Sbjct: 797 GFQPHLESYHYLIVGLCDEGDYDKAKSLFCDL 828



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 223/487 (45%), Gaps = 27/487 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           LNDA +       +G  P V+  TN++   CKA ++  A++V   M+SS    D  +Y  
Sbjct: 287 LNDAIV-------RGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGV 339

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N L KK     A + V +M   G   N V Y S++ G C +G +  +L+    +  +G
Sbjct: 340 LINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG 399

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PNA+TYS L+    +++ +H AM L+  +   G  P +++Y  L+ G CK+   + A 
Sbjct: 400 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 459

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R F  +   G  P+  +YN+L  +LC  GR EEA   L          T VTY  L+   
Sbjct: 460 RLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGF 516

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
           +  G TD A  ++++MV    +  + +Y+ ++  LC + K++  +  LDQM     K N 
Sbjct: 517 SKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNI 576

Query: 379 GTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             Y   ++ +   GK   A ++   + +  +      Y   I+S C+ G+  +A  L+ E
Sbjct: 577 VAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 636

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL-----LGL 492
           M + G  PD  TY+  I G    G ++ A      M +   +P+   +  LL     + L
Sbjct: 637 MERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSL 696

Query: 493 CKSRRTDLS-----------LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
             +   D S            ++ + M++ G  P   TY+ ++ G      LE +  +  
Sbjct: 697 VDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFD 756

Query: 542 ELQLRQV 548
            ++ + +
Sbjct: 757 HMRGKDI 763



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 200/399 (50%), Gaps = 7/399 (1%)

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G++  A  L+  M   G   N  +Y  L++GLC    + ++L  L  ++Q G   N  TY
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L++   KE  +H A ++L+++  +G  P++ +YN ++ G CK GR ++A+     +  
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P+  +YNIL+  LC E + +EA ELL +      +PT++T+  +I       + D 
Sbjct: 259 NGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           AL+V   M+    +    +Y  +I  L  + +     + + +MF     PN   Y  +  
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             C VGKV  A  + + L   +   P  + Y  +I  L +  K ++A  L+ +M + G T
Sbjct: 378 GYCKVGKVGAALEVFR-LMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT 436

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P   TY++LI+G C +   + A  +F +ME+    PD   +N L   LCKS R +   E 
Sbjct: 437 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAE---EA 493

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +  ++ KG +  + TYT LV+G +     + +A +++++
Sbjct: 494 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 532



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 222/479 (46%), Gaps = 40/479 (8%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           T L+  LC+   +++A+ ++ MMV  G   +  +YT L+  LCK+G +  A +++E+M  
Sbjct: 164 TILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPL 223

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   +  TYN+++ G C  G +  +L     + + G  P+ +TY+ L+     E+   A
Sbjct: 224 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEA 283

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
             +LL+D I +G  P ++++  ++ G CK  R ++A+R    + S   + ++ +Y +L+ 
Sbjct: 284 E-ELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLIN 342

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            L  + R++EA E ++EM     +P +V Y  +I      GK   AL+V   M     RP
Sbjct: 343 VLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRP 402

Query: 342 SAASYNPIIARL-----------------------------------CSEGKVDLVVKCL 366
           +A +Y+ +I  L                                   C + + D   +  
Sbjct: 403 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 462

Query: 367 DQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           + M      P+E  YN L   LC  G+ +EA++    L  K     +  Y  ++    + 
Sbjct: 463 EMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKA 519

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G T  A  L+ +M   G   DSYTYS L++ LC +  + EAL I   M     K ++  +
Sbjct: 520 GNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAY 579

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             ++  + K  + D +  +F  MI  G  P+ TTYT+ +       ++E +  ++ E++
Sbjct: 580 TIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEME 638



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 210/457 (45%), Gaps = 18/457 (3%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           D +QA   +        ++KA  ++ MM   G   +  SYT L+  LC+   V  A+ L+
Sbjct: 129 DAIQAIRRV-----GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLL 183

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
             M   G   N  TY  L++GLC  G ++ + + L+ +  +G+VP+ +TY+ +++   K 
Sbjct: 184 VMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKS 243

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
             +  A+ +   +   G  P+  +YN+L+ GLC E + +EA     D   +GF P V+++
Sbjct: 244 GRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITF 302

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
             ++   C   R ++A  +   M   +    +  Y +LI  L    +   A + + EM  
Sbjct: 303 TNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFA 362

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQE 395
               P+   Y  II   C  GKV   ++    M H  C+PN  TY+ L   L    K+ +
Sbjct: 363 NGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHK 422

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A A+I  +     +     Y  +I   C+K +   AF+L   M + G TPD   Y+ L  
Sbjct: 423 AMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTH 482

Query: 456 GLCMEGLIEEALEIF----VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            LC  G  EEA        VV+ +  Y   VD F+       K+  TD +  + + M+ +
Sbjct: 483 ALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFS-------KAGNTDFAAVLIEKMVNE 535

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           G   +  TY++L++ +  Q +L  +  +L ++ L  V
Sbjct: 536 GCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGV 572



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 205/484 (42%), Gaps = 34/484 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +++ A   LE M  +G  P V     ++   CK+ +MK A+ +  +M  +G  PD  
Sbjct: 207 KEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDW 266

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+  LC +     A +L+      G+    +T+ +++ G C    ++ +L+    +
Sbjct: 267 TYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSM 325

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +      +   Y  L+    K+     A + + ++ A G  PN+V Y  ++ G CK G+ 
Sbjct: 326 LSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKV 385

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+  FR +  +G  PN  +Y+ L+  L  + +  +A  L+ +M     +P ++TY  L
Sbjct: 386 GAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTL 445

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK---------------- 358
           I       + D+A ++ + M +    P   +YN +   LC  G+                
Sbjct: 446 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLT 505

Query: 359 ----------------VDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQ 401
                            D     +++M +  CK +  TY+  L  LC   K+ EA +I+ 
Sbjct: 506 KVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILD 565

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +           Y  +I+ + ++GK   A  +  EM   G  P + TY+  I   C  G
Sbjct: 566 QMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIG 625

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            IEEA  +   ME     PDV  +N  + G       D +    + MI+    PN  TY 
Sbjct: 626 QIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYW 685

Query: 522 ILVE 525
           IL++
Sbjct: 686 ILLK 689


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 231/477 (48%), Gaps = 34/477 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + +AF  L    S+G +P ++    +LY LCK  K  +A  V+  M+  G+ P+A+
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+  +C++ N+  A ++ ++M   G   + V+++SL+  L   G+L Q+L     +
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+VP+   Y+ L++   +   +  A+K+ D+++A+G   ++V+YN  L GLCK+   
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A   F ++  +G  P+  ++  L+R  C +G  ++A  L   M   +  P  VTYN L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G+   A ++ D+M++    P   SY  ++   CS G +   +   DQM  +  
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           +PN  T N L                                  I   CR G   +A++ 
Sbjct: 604 RPNLVTCNTL----------------------------------IKGYCRSGDMPKAYEY 629

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L +M   G  PDS++Y++LI G   E  +E+A  +   ME+   + ++  +N +L G C 
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             +   + +V + MIE G  P+  TY+ L+ G   QD ++ +     E+  R +V +
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 229/499 (45%), Gaps = 24/499 (4%)

Query: 75  RDHKLNDAFLQLERMVSKG--HKPDVVQA----------TNLLYDL-----CKANKMKKA 117
           R  +L++A   + RMV K    +  VV++            L+YDL      +A K+++ 
Sbjct: 147 RGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREG 206

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
            +  +++   G+    ++   L+  L + G V  A ++  ++   G   N  T N +V  
Sbjct: 207 SEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNA 266

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           LC        + FL  +  KG+  +  TY+ L+ A  +E  V  A +LL+   ++G +P 
Sbjct: 267 LCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPG 326

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           L++YN +L GLCK G+ + A     ++   G  PN  +YN LL  +C      EA E+  
Sbjct: 327 LLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFD 386

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           EM      P +V+++ LIG LA +G    AL    EM +    P    Y  +I   C  G
Sbjct: 387 EMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNG 446

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK--QNSSPQEFY 415
            +   +K  D+M  R C  +  TYN    L G+ K ++ FA    L N+  +     +FY
Sbjct: 447 ALSDALKMRDEMLARGCFMDVVTYN--TFLNGLCK-KKMFADADMLFNEMVERGMVPDFY 503

Query: 416 KY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            +  +I   C+ G   +A  L   M +    PD  TY++LI G C  G +  A E++  M
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
              D  PD  ++  +L G C S     +L +   M+EKG  PN  T   L++G     ++
Sbjct: 564 IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDM 623

Query: 534 ELSAEVLKELQLRQVVSES 552
             + E L ++    ++ +S
Sbjct: 624 PKAYEYLSKMISNGIIPDS 642



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 126/284 (44%), Gaps = 34/284 (11%)

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y++L+R+     +  E +E    +     S +I   N L+G L   G  D A ++  E+V
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +G    +  + N ++  LC + K + V+  L  M        EG              + 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM--------EG--------------KG 287

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
            FA I +            Y  +I + CR+G   +AFQLL   +  G  P   TY++++ 
Sbjct: 288 VFADIVT------------YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILY 335

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GLC  G  + A ++ + M +    P+   +N LL+ +C+      + E+F  M  +G +P
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           +  +++ L+  +A    L  +    +E++   +V ++ +  +++
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILI 439


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 242/544 (44%), Gaps = 43/544 (7%)

Query: 15  SPEPFRKAYG--FYSQIPNLHSFSLNKGFIRVLAST--QVTISPKDSVYTKPNRKPGNNN 70
           SP P R  +   F S + +   ++L    +R+ A        +P  + Y    R      
Sbjct: 84  SPPPLRPLFDRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRA 143

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D RH    L+        MV  G +PD     +L+   C+  ++  A  + + M   G  
Sbjct: 144 DLRHAQRYLS-------LMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFS 196

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQL-------------------------------VEKM 159
            DA SY  L+   C+ G V  A++L                               ++KM
Sbjct: 197 QDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKM 256

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
           ++ G+   T  Y +LV   C      ++ + L+ +   GLVP A T + ++ A  +E  +
Sbjct: 257 KELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRM 316

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A+++ + +  KG +PN+ +YN ++ G C  G+  +A+     +   G EP+VV+YN+L
Sbjct: 317 SGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLL 376

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +R  C++G  E A  LL  M+G   +    TYN+LI +L   GK D A  + D +     
Sbjct: 377 IRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFA 398
           RP++ ++N +I  LC  GK D+    L++M    C P+  TY+  +  LC     +E  +
Sbjct: 437 RPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLS 496

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            I  +  K        Y  VI  L ++     A ++  +M   G +PD  TY++ +R  C
Sbjct: 497 FIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYC 556

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            EG + EA  + + M++     D   +N L+ G     +TD ++ + + M     MPN  
Sbjct: 557 NEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHF 616

Query: 519 TYTI 522
           T+ I
Sbjct: 617 TFFI 620



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 186/377 (49%), Gaps = 6/377 (1%)

Query: 153 MQLVEKMEDYGYPTNT-VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           ++L   M  +G P  T  TYN+L+R LC   +L  + ++L  +++ G  P+AFT++ L+ 
Sbjct: 113 LRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLIL 172

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              + + +  A  L D +  +G   + VSY  L+ G C+ GR +EA+  FR+L     +P
Sbjct: 173 GYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QP 228

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           ++ ++  L++ LC   R EE   +L +M      P    Y  L+       K + A K+L
Sbjct: 229 DMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKML 288

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
           +EM      P A +   ++   C EG++   V+  + M  + C+PN  TYN +    C V
Sbjct: 289 NEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNV 348

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           GKV +A A++  +           Y  +I   C  G    AF+LL  M   G   D YTY
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTY 408

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + LI  LC  G ++EA  +F  +E    +P+   FN ++ GLCK  + D++    + M+ 
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVS 468

Query: 511 KGQMPNETTYTILVEGI 527
            G  P+  TY+  +E +
Sbjct: 469 AGCAPDTYTYSPFIENL 485



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 206/450 (45%), Gaps = 5/450 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+  LC+   ++ A + + +MV SG  PDA ++  L+   C+   +  A  L +KM   G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           +  + V+Y +L+ G C  G ++++L+    L Q    P+ +T++ L++     R     +
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGL 250

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            +L  +   G +P   +Y  L+   C+E + EEA +   ++   G  P  V+   ++ + 
Sbjct: 251 YMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAY 310

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C EGR   A  +   M      P + TYN ++      GK   A+ +LD+M +    P  
Sbjct: 311 CREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDV 370

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +YN +I   C +G ++   + L  M       ++ TYN L   LC  GKV EA ++   
Sbjct: 371 VTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           L  +        +  VI  LC+ GK   A   L +M   G  PD+YTYS  I  LC    
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG 490

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
             E L     M + D KP   N+  ++  L K R   L+  ++  M+  G  P+  TYT 
Sbjct: 491 SREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTT 550

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSES 552
            V    ++  L  +  V+ E++   ++ ++
Sbjct: 551 SVRAYCNEGRLHEAENVVMEMKKGGIIVDA 580



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/532 (24%), Positives = 237/532 (44%), Gaps = 54/532 (10%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDL-CKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +    L++M   G +P   +A   L DL C+  K ++A K++  M  +G++P A + T +
Sbjct: 248 EGLYMLQKMKELGWRP-ATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           VN  C++G +  A+++ E M+  G   N  TYN++V+G C +G + +++  LD++ + G+
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ L+     +  + +A +LL  +   G   +  +YNVL+  LCK G+ +EA  
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F  L  +G  PN V++N ++  LC  G+++ A   L +M     +P   TY+  I +L 
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC 486

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
               +   L  +DEM++   +PS  +Y  +I RL  E    L  +   QM    C P+  
Sbjct: 487 KTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVV 546

Query: 380 TY-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TY   +   C  G++ EA  ++  +           Y  +I      GKT  A  +L  M
Sbjct: 547 TYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM 606

Query: 439 TKYGFTPDSYT------------------------------------------------- 449
           T     P+ +T                                                 
Sbjct: 607 TGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSA 666

Query: 450 --YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             Y +++ G   E  ++E   +   M+E D   + D + +L+   CK R    +  +   
Sbjct: 667 RAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCS 726

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           MI  G +PN  +Y  L+ G   + + + + E+ + L+ ++  ++  V ++++
Sbjct: 727 MIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIII 778



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 222/472 (47%), Gaps = 19/472 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  A   L++M   G +PDVV    L+   C    ++ A +++ +M  +G+  D  +Y 
Sbjct: 350 KVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYN 409

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G V  A  L + +E  G   N+VT+N+++ GLC  G  + +  FL++++  
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSA 469

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+ +TYS  +E   K +G    +  +D+++ K  KP+ V+Y +++  L KE     A
Sbjct: 470 GCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA 529

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R +  + S G  P+VV+Y   +R+ C EGR  EA  ++ EM  G      + YN LI  
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASY-------------NPIIARLCSEGKVDLVVK 364
               GKTDHA+ +L  M      P+  ++               +  +  S  K   +  
Sbjct: 590 HTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELAD 649

Query: 365 CLD--QMFHRRCKPNEGTYNGLAMLCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
             +  ++  +   P+      LA+L G     ++ E  +++  +        ++ Y  ++
Sbjct: 650 VFELFELMKKNSVPSSARAY-LAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLV 708

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              C+      A+ LL  M  +GF P+  +Y  L+ G   EG  + A EIF  +   +Y 
Sbjct: 709 NCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYN 768

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            D   +  ++ GL +    D+  ++  ++ +    P++ TY +L E ++ ++
Sbjct: 769 TDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELSTRE 820



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 199/414 (48%), Gaps = 5/414 (1%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P  ++Y  L+  LC++ ++ +A + +  M   G+  +  T+NSL+ G C    L+ +   
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D++  +G   +A +Y+ L+E   +   V  A++L  ++     +P++ ++  L+ GLC 
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFREL----EQPDMYTHAALVKGLCD 242

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R EE +   + +   G+ P   +Y  L+   C E + EEA ++L EM      P  VT
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
              ++ +    G+   A++V + M      P+  +YN ++   C+ GKV   +  LDQM 
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
               +P+  TYN L    C  G ++ AF +++ +     ++ Q  Y  +I +LC+ GK  
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A  L   +   G  P+S T++++I GLC  G  + A      M      PD   ++  +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             LCK++ +   L     M++K   P+   YTI+++ +  +    L+  +  ++
Sbjct: 483 ENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM 536



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 221/531 (41%), Gaps = 62/531 (11%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ K  +A   L  M   G  P  V  T ++   C+  +M  A++V E M   G  
Sbjct: 273 DLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCE 332

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  +V   C  G V  AM L+++M + G   + VTYN L+RG C+ G++  + + 
Sbjct: 333 PNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL 392

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   GL  + +TY+ L++A  K   V  A  L D +  +G +PN V++N ++ GLCK
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A  F   + S G  P+  +Y+  + +LC      E    + EM   D  P+ V 
Sbjct: 453 GGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVN 512

Query: 311 YNILIGSL---------------------------------AY--HGKTDHALKVLDEMV 335
           Y I+I  L                                 AY   G+   A  V+ EM 
Sbjct: 513 YTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMK 572

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY-------------- 381
           KG     A +YN +I    S GK D  V  L  M      PN  T+              
Sbjct: 573 KGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAE 632

Query: 382 ------NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQ 433
                   +     +  V E F ++     K+NS P     Y  ++     + +  +   
Sbjct: 633 DVPLKTTSVWKTIELADVFELFELM-----KKNSVPSSARAYLAILEGFSEERRLDEVTS 687

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+  M +     +   Y+SL+   C   +  +A  +   M  + + P++ ++  LL G  
Sbjct: 688 LVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFT 747

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              + D + E+F+ +  K    +E  + I+++G+  Q   ++  +++  L+
Sbjct: 748 AEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILE 798



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 135/307 (43%), Gaps = 6/307 (1%)

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGF-EPNVVSYNILLRSLCMEGRWEEANELLAE 298
           ++  LLT   +   T   +R F  +   G   P   +YN L+R+LC       A   L+ 
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P   T+N LI       + D A  + D+M    F   A SY  +I   C  G+
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           VD  +    ++F    +P+  T+  L   LC   + +E   ++Q +           Y  
Sbjct: 215 VDEAL----ELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++   CR+ K  +A ++L EM   G  P + T ++++   C EG +  A+ +F  M+   
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            +P+V  +NA++ G C   +   ++ +   M E G  P+  TY +L+ G      +E + 
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390

Query: 538 EVLKELQ 544
            +L+ ++
Sbjct: 391 RLLRLME 397



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 1/141 (0%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGF-TPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
           ++ ++T   R   T    +L   M  +G   P   TY++LIR LC    +  A     +M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
               ++PD   FN+L+LG C++++ D++ ++F  M  +G   +  +Y  L+EG      +
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRV 215

Query: 534 ELSAEVLKELQLRQVVSESAV 554
           + + E+ +EL+   + + +A+
Sbjct: 216 DEALELFRELEQPDMYTHAAL 236


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 220/478 (46%), Gaps = 1/478 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +DHK++D    L  M  KG   D+V    L+   C+   + +A +VM  M   G+ P   
Sbjct: 197 KDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLF 256

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N LCKKG    A  +  +M   G   +T TYN+L+   C   N  ++      +
Sbjct: 257 TYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDM 316

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G+ P+  ++S L+  + +   +  A+    D+   G  P+ V Y +L+ G C+ G  
Sbjct: 317 LHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMM 376

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA+     +  +G   +VV+YN +L  LC +    +AN L  EM      P   T+  L
Sbjct: 377 SEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTL 436

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G    AL +   M +   +P   +YN +I   C   +++   +  ++M  R+ 
Sbjct: 437 IHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKI 496

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  +Y  L    C +G V EAF +   +  K           VI   CR G   +A +
Sbjct: 497 FPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADE 556

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L +M   G  PDS TY++LI G      +++A  +   ME    +PDV  +N +L G C
Sbjct: 557 FLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFC 616

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +  R   +  + + MIE+G  P+ +TYT L+ G   QD L+ +     E+  R  V +
Sbjct: 617 RQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 192/396 (48%), Gaps = 1/396 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+S G  PD      LL + C+ N   +A  +   M+  G+ PD  S++ L+    + G+
Sbjct: 281 MLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGH 340

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+     M+  G   + V Y  L+ G C  G ++++L+  D+++++G   +   Y+ 
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNT 400

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L    K++ +  A  L D+++ +G  P+  ++  L+ G CKEG   +A+  F  +  K 
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P++V+YNIL+   C     E+ANEL  EM      P  ++Y IL+      G    A 
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAF 520

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
           ++ DEM++   +P+  + N +I   C  G +    + L +M      P+  TYN L    
Sbjct: 521 RLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGF 580

Query: 389 GVGK-VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
             G+ + +AF +I  +  K        Y  ++   CR+G+  +A  +L +M + G  PD 
Sbjct: 581 VKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDR 640

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            TY++LI G   +  ++EA      M +  + PD D
Sbjct: 641 STYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDD 676



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 217/474 (45%), Gaps = 51/474 (10%)

Query: 70  NDTRHRDHKLNDAFLQLERMVSKG--HKPDVVQA----------TNLLYDL-----CKAN 112
           N  R R  +L+DA   + RM+ +    + ++V++           NL++DL      +A 
Sbjct: 70  NLRRVRSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQAR 129

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K+ +     +++   G +   ++   L+  L K G V  A ++  ++   G   N  T N
Sbjct: 130 KLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLN 189

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            +V  LC    ++    FL  + QKG+  +  TY+ L+ A  +E  +  A ++++ +  K
Sbjct: 190 IMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGK 249

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KP L +YN ++ GLCK+GR   A   F ++ S G  P+  +YN LL   C    + EA
Sbjct: 250 GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEA 309

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            ++ ++M     SP +++++ LIG  + +G  D AL    +M      P    Y  +I  
Sbjct: 310 KDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILING 369

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
            C  G +   ++  D+M  + C  +   YN                              
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNT----------------------------- 400

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                ++  LC+K     A  L  EM + G  PD  T+++LI G C EG + +AL +F +
Sbjct: 401 -----ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGI 455

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           M + + KPD+  +N L+ G CK+   + + E++  MI +   PN  +Y ILV G
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNG 509



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 153/304 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  +++A    ++M+ +G   DVV    +L  LCK   +  A  + + MV  G++PD  
Sbjct: 372 RNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFC 431

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++  CK+GN+G A+ L   M       + VTYN L+ G C    + ++ +  + +
Sbjct: 432 TFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEM 491

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I + + PN  +Y+ L+        V  A +L D++I KG KP LV+ N ++ G C+ G  
Sbjct: 492 ISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDL 551

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A  F   + S+G  P+ ++YN L+         ++A  L+ +M+     P +VTYN++
Sbjct: 552 SKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVI 611

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G+   A  +L +M++    P  ++Y  +I    S+  +    +  D+M  R  
Sbjct: 612 LNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGF 671

Query: 375 KPNE 378
            P++
Sbjct: 672 VPDD 675



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/285 (20%), Positives = 120/285 (42%), Gaps = 34/285 (11%)

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +++L+RS     +  E  +    +       +I   N L+G L   G  D A +V +E+ 
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +     +  + N ++  LC + K+D V   L  M  +    +  TYN L           
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTL----------- 226

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
                                  I + CR+G   +AF+++  M+  G  P  +TY+++I 
Sbjct: 227 -----------------------INAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVIN 263

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GLC +G    A  +F  M      PD   +N LL+  C++     + ++F  M+ +G  P
Sbjct: 264 GLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSP 323

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +  +++ L+   +    L+ +    ++++   +V ++ +  +++ 
Sbjct: 324 DLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILIN 368


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 235/506 (46%), Gaps = 38/506 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNL-LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           L +A   L RM   G  P    + N+ +  + +A +   A++V + M    ++P+  +Y 
Sbjct: 176 LGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYN 235

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++   K G++     L ++M  +G   N +TYN L+ GLC  G + ++   LD +  +
Sbjct: 236 TMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 295

Query: 198 GLVPNAFTYSFL-----------------------------------LEAAYKERGVHAA 222
            +VP+ FTYS L                                   L    K+  V  A
Sbjct: 296 KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIA 355

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            ++L  ++  G  P  V YN L+ G C+ G  E A   F  + S+  +P+ ++YN L+  
Sbjct: 356 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 415

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC   R   A +LL EM     +PT+ T+N LI +    G+ +    VL EM +   +P+
Sbjct: 416 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 475

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
             SY  I+   C  GK+   V  LD MFH+   PN   YN +       G   +AF +++
Sbjct: 476 VVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVE 535

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            + +   S     Y  +I  LC + +  +A +++  ++ +   PD+ +Y++LI   C  G
Sbjct: 536 KMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRG 595

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I++AL++   M +Y  K  V  ++ L+ GL  + R      ++Q M++   +P+   + 
Sbjct: 596 NIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHN 655

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQ 547
           I+VE  +     E+ AE L++  L++
Sbjct: 656 IMVEAYSKYGN-EIKAEDLRKEMLQK 680



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 207/436 (47%), Gaps = 2/436 (0%)

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRG 177
           +   ++ S+G  PD  ++   V      G++G A+ ++ +M  D   P N  +YN ++ G
Sbjct: 146 RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAG 205

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           +   G    +++  D + ++ ++PN  TY+ +++   K   + A   L D ++  G KPN
Sbjct: 206 MWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPN 265

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
            ++YNVLL+GLC+ GR  E      ++ S+   P+  +Y+IL   L   G  +    L  
Sbjct: 266 AITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFG 325

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +      +    T +IL+  L   GK   A +VL  +V     P+   YN +I   C  G
Sbjct: 326 KSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 385

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           +++       QM  R  KP+  TYN L   LC   ++  A  ++  + +   +   E + 
Sbjct: 386 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 445

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I +  R G+  + F +L EM + G  P+  +Y S++   C  G I EA+ I   M   
Sbjct: 446 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 505

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           D  P+   +NA++    +    D +  + + M   G  P+  TY +L++G+ +Q ++  +
Sbjct: 506 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565

Query: 537 AEVLKELQLRQVVSES 552
            E++  L   +++ ++
Sbjct: 566 EEIINSLSNHRLIPDA 581



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 187/411 (45%), Gaps = 1/411 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L   F   ++MV  G KP+ +    LL  LC+A +M +   +++ M S  ++
Sbjct: 239 DGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV 298

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L + L + G+    + L  K    G      T + L+ GLC  G ++ + + 
Sbjct: 299 PDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV 358

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  L+  GLVP    Y+ L+    +   +  A      + ++  KP+ ++YN L+ GLCK
Sbjct: 359 LQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCK 418

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R   A     ++   G  P V ++N L+ +    G+ E+   +L+EM      P +V+
Sbjct: 419 AERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 478

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  ++ +   +GK   A+ +LD+M      P+A  YN II      G  D     +++M 
Sbjct: 479 YGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK 538

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                P+  TYN L   LC   ++ EA  II SL N +       Y  +I++ C +G   
Sbjct: 539 SNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNID 598

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +A  L   M KYG      TY  LI GL   G + E   ++  M + +  P
Sbjct: 599 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVP 649



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 145/308 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K++ A   L+ +V+ G  P  V    L+   C+  +++ A      M S  I PD  
Sbjct: 348 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 407

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK   +  A  L+ +M+D G      T+N+L+      G L +    L  +
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 467

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL PN  +Y  ++ A  K   +  A+ +LDD+  K   PN   YN ++    + G  
Sbjct: 468 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 527

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      + S G  P++V+YN+L++ LC + +  EA E++  +      P  V+YN L
Sbjct: 528 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 587

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +  Y G  D AL +   M K   + +  +Y+ +I+ L   G++  +     +M     
Sbjct: 588 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNV 647

Query: 375 KPNEGTYN 382
            P+   +N
Sbjct: 648 VPSNAIHN 655



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 156/364 (42%), Gaps = 41/364 (11%)

Query: 221 AAMKLLDDII--AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
            A++LL D+   A+   P+L S N+LL  L   GR  +  R F  L S G  P+  ++N 
Sbjct: 106 GALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNK 165

Query: 279 LLRSLCMEGRWEEANELLAEMD-GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            +++    G   EA  +L  M   G   P   +YN++I  +   G+   A++V DEM + 
Sbjct: 166 AVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTER 225

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEA 396
              P+  +YN +I      G ++      DQM     KPN  TYN  L+ LC  G++ E 
Sbjct: 226 AVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGET 285

Query: 397 FAIIQSLGNKQNSSPQEFY------------------------------------KYVIT 420
            A++  + + Q   P  F                                       ++ 
Sbjct: 286 SALLDEMAS-QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLN 344

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            LC+ GK   A ++L  +   G  P    Y++LI G C  G +E A   F  M+    KP
Sbjct: 345 GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKP 404

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D   +NAL+ GLCK+ R   + ++   M + G  P   T+  L++      +LE    VL
Sbjct: 405 DHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVL 464

Query: 541 KELQ 544
            E+Q
Sbjct: 465 SEMQ 468



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 114/229 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L   F+ L  M   G KP+VV   +++   CK  K+ +A+ +++ M    ++
Sbjct: 449 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 508

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A  Y  +++   + G    A  LVEKM+  G   + VTYN L++GLC    ++++ + 
Sbjct: 509 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI 568

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++ L    L+P+A +Y+ L+ A      +  A+ L   +   G K  + +Y+ L++GL  
Sbjct: 569 INSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGG 628

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            GR  E    ++ +      P+   +NI++ +    G   +A +L  EM
Sbjct: 629 AGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 217/466 (46%), Gaps = 1/466 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A    +RM+     P       +L  L         I + +   S+G  PD  +   L+N
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
           C C   ++ +A  ++  +   GY  N +T N+L++GLC  G + ++L F D+++ +G   
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  +Y  L+    K     A  +LL  +     KP++V YN ++  LCK     +A   +
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++  KG  PNVV+YN L+   C+ G  +EA  LL EM   + +P + T+N LI +L   
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           GK   A  VL  M+K   +P   +YN +I       KV         M      PN  TY
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             +   LC    V EA ++ + +  K        Y  +I  LC+     +A  L  +M +
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD Y+Y+ L+  LC  G +E A E F  +    Y  +V  +N ++ GLCK+     
Sbjct: 407 QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGE 466

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           ++++   M  KG MP+  T+  ++  +  +DE + + ++L+E+  R
Sbjct: 467 AMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIAR 512



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 235/497 (47%), Gaps = 24/497 (4%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +AF  L  M  K   PDV     L+  L K  KMK A  V+ +M+ + I PD  +Y  
Sbjct: 254 LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNS 313

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++       V  A  +   M   G   N  TY +++ GLC    +++++   + +  K 
Sbjct: 314 LIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKN 373

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++P+  TY+ L++   K   +  A+ L   +  +G +P++ SY +LL  LCK GR E A 
Sbjct: 374 MIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAK 433

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            FF+ L  KG+  NV +YN+++  LC    + EA +L ++M+G    P  +T+  +I +L
Sbjct: 434 EFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICAL 493

Query: 319 AYHGKTDHALKVLDEMV-----------------------KGRFRPSAASYNPIIARLCS 355
               + D A K+L EM+                       K   +P   +Y  ++     
Sbjct: 494 FEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFL 553

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
             ++         M      PN   Y  +   LC    V EA ++ + + +K        
Sbjct: 554 VNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVT 613

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I +LC+     +A  LL EM ++G  PD Y+Y+ L+ GLC  G +E A EIF  + 
Sbjct: 614 YTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLL 673

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
              Y  +V  + A++  LCK+   D +L++   M +KG MP+  T+ I++  +  +DE +
Sbjct: 674 VKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDEND 733

Query: 535 LSAEVLKELQLRQVVSE 551
            + ++L E+  R ++ E
Sbjct: 734 KAEKILXEMIARGLMKE 750



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 1/331 (0%)

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+   D ++     P    +N +L+ L         I  F+   S G  P++ + NIL+ 
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C       A  +LA +      P  +T N LI  L + G+   AL   D++V   F+ 
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
           +  SY  +I  LC  G+   V + L ++     KP+   YN +   LC    + +A  + 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +  K  S     Y  ++   C  G   +AF LL EM      PD  T+++LI  L  E
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G ++ A  +  VM +   KPDV  +N+L+ G     +   +  VF  M + G  PN  TY
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           T +++G+  +  ++ +  + +E++ + ++ +
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPD 377


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 231/484 (47%), Gaps = 39/484 (8%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+    T ++  L KA K+ +A +V++ M     +P  ++YT ++   CK G++G A  L
Sbjct: 224 PNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHL 279

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +E M+  GY  + +TYN+L+ G C L  ++++ + L+ +     VP+ FTY  L+    +
Sbjct: 280 LEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCR 339

Query: 216 ERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
            + +  A  LL  +  +    PN+VSYN L+ G  K  R  +A + F ++ + G  P+VV
Sbjct: 340 AKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVV 399

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y+ L+R LC  GR  EA+  L EM G    P +  Y+ +I  L   G+ D A  V D M
Sbjct: 400 TYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSM 459

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
           V    +P+ A YN +I  LC  G++      + +M  R C P+  TY  L + LC   + 
Sbjct: 460 VANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRT 519

Query: 394 QEA----------------------FAIIQSLGNKQ----------NSSPQEFYKYVITS 421
            EA                       A ++ L   Q          NS    FY  VI S
Sbjct: 520 DEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIES 579

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC++    +A QLL +M   G  PD  T  +L+  +C +     A+     M     KP 
Sbjct: 580 LCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPS 639

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ-MPNETTYTILVEGIAHQDELELSAEVL 540
           V  ++ LL  L K+ +   +  V + +I      P+E  Y  L+   ++QD++E +  VL
Sbjct: 640 VGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVL 699

Query: 541 KELQ 544
           +EL+
Sbjct: 700 QELK 703



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 231/523 (44%), Gaps = 53/523 (10%)

Query: 67  GNNNDTRHRDHKLN-------------DAFLQLERMVSKGHKPDVVQATNLLYDLCKANK 113
           G   D RH  H  N             +A+   +    +   PD +    L+  LC   K
Sbjct: 81  GTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGK 140

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED------------ 161
           +K A  + E MV  G+ P   +  +L+N LCK GN+  A++  EKM              
Sbjct: 141 LKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILID 200

Query: 162 -------------------YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
                              +    N  TY  ++ GL   G + ++    +R++Q+  VP 
Sbjct: 201 GLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEA----ERVLQEMPVPT 256

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              Y+ ++    K   +  A  LL+D+  KG + + ++YN L+ G C+    + A     
Sbjct: 257 LANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLE 316

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYH 321
           ++ S  F P++ +Y+IL+  LC   R  EA +LL  + +  D +P +V+YN LI   +  
Sbjct: 317 EMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKA 376

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + + A ++  EMV     P   +Y+ +I  LC+ G+       L++M  ++  P    Y
Sbjct: 377 ARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVY 436

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           +  ++ LC  G++  A  +  S+           Y  +I  LC+ G+   A   + EMT+
Sbjct: 437 SSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTE 496

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G +PD  TY +LI GLC     +EA +++V   E   +    + N ++  L   R  + 
Sbjct: 497 RGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL---RCLEQ 553

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +  V ++++  G  P    Y  ++E +  ++ L  + ++L+++
Sbjct: 554 AQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDM 596



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 239/503 (47%), Gaps = 38/503 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R  +++ A+  LE M S    PD+     L+  LC+A ++ +A  ++  + +     P+ 
Sbjct: 304 RLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNV 363

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            SY  L++   K   V  A QL  +M   G   + VTY++L+RGLC  G  +++  +L+ 
Sbjct: 364 VSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEE 423

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ K ++P    YS ++    +   + AA  + D ++A G +PNL  YN L+ GLCK GR
Sbjct: 424 MVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGR 483

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL------------------ 295
             +A    +++  +G  P+ V+Y  L+  LC   R +EA +L                  
Sbjct: 484 LCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNV 543

Query: 296 ----LAEMDGGDR----------SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
               L  ++   R          SPT   Y  +I SL        A ++L++M+    +P
Sbjct: 544 VIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKP 603

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
             ++ + ++  +C + K  + +  L++M     KP+ GTY+ L   L   GK  EA  ++
Sbjct: 604 DGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVL 663

Query: 401 QSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEM-TKYGFTPDSYTYSSLIRGLC 458
           + L +  +  P E +Y  +I +   + +  +A  +L E+ +K+G       Y++L++GL 
Sbjct: 664 RRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQ-SIVAYNTLLKGLF 722

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
               ++   E+   M+  ++  +   FN L+ G C+  +TD ++ V   M +K   P+  
Sbjct: 723 RTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTPSAA 781

Query: 519 TYTILVEGIAHQDELELSAEVLK 541
               LV+ +A  +  + S +++K
Sbjct: 782 IIKFLVDELARAEREQESKDLVK 804



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 158/326 (48%), Gaps = 20/326 (6%)

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +YN     L + G+ EEA R F++   +   P+ ++Y IL+R LC  G+ + A  L  EM
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P ++T   L+ +L   G  + AL+  ++M      P AA++  +I  L    +V
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAATWTILIDGLFRAIRV 208

Query: 360 DLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           D      ++M H    PN  TY    NGL      GKV EA  ++Q +     ++    Y
Sbjct: 209 DEACYYFEEMKHTAI-PNNWTYTVVINGLV---KAGKVAEAERVLQEMPVPTLAN----Y 260

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             VI   C+ G   +A+ LL +M + G+  D+ TY++LI G C    I+ A E+   M+ 
Sbjct: 261 TSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKS 320

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI-EKGQMPNETTYTILVEGIAH----Q 530
            D+ PD+  ++ L+ GLC+++R   + ++   +  E    PN  +Y  L++G +      
Sbjct: 321 NDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVN 380

Query: 531 DELELSAEVLKELQLRQVVSESAVER 556
           D  +L  E++   Q   VV+ S + R
Sbjct: 381 DAYQLFLEMVTAGQHPDVVTYSTLIR 406



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 1/119 (0%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           VI  + + G++   F   +  T+  F    +TY+     L   G  EEA  +F      +
Sbjct: 62  VILHMVKNGESAMVF-FGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQE 120

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
             PD   +  L+ GLC   +  L+  +++ M+++G  P   T   L+  +     LEL+
Sbjct: 121 LIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELA 179


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 229/454 (50%), Gaps = 11/454 (2%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+ +  T ++   CKA ++ +A ++++ M   G+  D   ++ L+  LC+KG +  A++ 
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ 168

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK-----GLVPNAFTYSFLL 210
            + M +   P N +TYN++V GLC    ++++L+  D + ++     G  P+  +YS ++
Sbjct: 169 FKSMGEECSP-NVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           +A  K + V  A +    + A G  PN+V+Y+ L+ GLCK  R  E +     +  KGF 
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
            N++ +N +L +L      E+A +    +    + P +VTYN+ +  L   G+ D A ++
Sbjct: 288 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRI 347

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV 390
           L EMV+ +  P   +Y+ II   C  G++D       +M    C P+  T+  + +L G 
Sbjct: 348 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF--MTLLHGF 405

Query: 391 G---KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
               K +EAF + + + N       + Y  ++  +C       A ++ ++M +    PD 
Sbjct: 406 SEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDC 465

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ LI+ LC    ++EA E   VME  +  P+    +AL+  LCK    D +  V   
Sbjct: 466 NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 525

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           ++E G  P   T+ ILVE +  + + E ++++L+
Sbjct: 526 VVEVGCQPLGETFKILVEELYLRKKWEAASKLLR 559



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 233/491 (47%), Gaps = 45/491 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM-----VSSGI 129
           R  ++++A  Q + M  +   P+V+    ++  LCKAN++ +A+++ + M      S G 
Sbjct: 158 RKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGC 216

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  SY+ +++ LCK   V  A +  ++M   G   N VTY+SL+ GLC +   ++ L+
Sbjct: 217 EPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLE 276

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L  + +KG   N   ++ +L A +K      A +  + ++  G KPN+V+YNV + GLC
Sbjct: 277 LLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLC 336

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K GR +EA R   ++      P+V++Y+ ++   C  GR ++A+++   M   +  P  V
Sbjct: 337 KAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPV 396

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN---------------------- 347
           T+  L+   + H K+  A +V ++MV   F P   +YN                      
Sbjct: 397 TFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKM 456

Query: 348 -------------PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKV 393
                        P+I  LC   +VD   + LD M      PN    + L  +LC  G+V
Sbjct: 457 KRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEV 516

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            EA +++ ++         E +K ++  L  + K   A +LL      GF  D+ TYS  
Sbjct: 517 DEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLL---RSPGFVADAATYSLC 573

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           +  +C  G  +EA+E+   M     +PD   + A+L  LC   R + ++  F+ M  +G 
Sbjct: 574 VAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGC 633

Query: 514 MPNETTYTILV 524
            P   TYT+L+
Sbjct: 634 APGLVTYTLLI 644



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 231/458 (50%), Gaps = 11/458 (2%)

Query: 93  GHKP----DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           G+KP    +      LL    KA + ++A ++++  +     P+   YT ++N  CK G 
Sbjct: 67  GNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQ 126

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A +L+++M++ G   + + +++L++GLC  G ++++L+    + ++   PN  TY+ 
Sbjct: 127 VDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNT 185

Query: 209 LLEAAYKERGVHAAMKLLDDI-----IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           ++    K   +  A++L DD+      + G +P+++SY+ ++  LCK  R ++A  +F+ 
Sbjct: 186 VVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKR 245

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + + G  PNVV+Y+ L+  LC   R  E  ELL  M        I+ +N ++ +L  + +
Sbjct: 246 MRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 305

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            + A +  + ++K   +P+  +YN  +  LC  G+VD   + L +M   +  P+  TY+ 
Sbjct: 306 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS 365

Query: 384 LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           +    C  G++ +A  +   +   +       +  ++       K+ +AF++  +M   G
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           F P   TY+ L+  +C    +E ALEI+  M+    +PD + +  L+  LC++RR D + 
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAK 485

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           E   +M     +PN      LVE +  Q E++ +  VL
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVL 523



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 212/454 (46%), Gaps = 4/454 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +++ A+   +RM + G  P+VV  ++L+  LCK ++  + ++++  M   G  
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +   +  +++ L K      A Q  E++   G   N VTYN  V GLC  G ++++ + 
Sbjct: 288 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRI 347

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +++  + P+  TYS +++   K   +  A  +   ++     P+ V++  LL G  +
Sbjct: 348 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 407

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             ++ EA R   D+ + GF P + +YN+L+  +C     E A E+  +M    R P   T
Sbjct: 408 HKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNT 467

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI  L    + D A + LD M      P+ A  + ++  LC +G+VD     LD + 
Sbjct: 468 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 527

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFA-IIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C+P   T+  L     + K  EA + +++S G   +++    Y   +  +C+ GK  
Sbjct: 528 EVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAAT---YSLCVAEICKAGKPD 584

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A +++ +M   G  PD  TY +++R LC    +E A+  F  M      P +  +  L+
Sbjct: 585 EAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLI 644

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
              C +   D +  +F+ M+  G  P   T   L
Sbjct: 645 GEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 189/394 (47%), Gaps = 44/394 (11%)

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G   NA+T + LL A  K +    A +LL + +     PN + Y  ++ G CK G+ +
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A     ++  +G + +V+ ++ L++ LC +GR +EA E    M G + SP ++TYN ++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVV 187

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFR------PSAASYNPIIARLCSEGKVDLVVKCLDQM 369
             L    + D AL++ D+M K R+       P   SY+ +I  LC   +VD   +   +M
Sbjct: 188 NGLCKANRIDEALELFDDMEK-RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM 246

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAF-------------------AIIQSL--GNKQ 407
               C PN  TY+ L   LC V +  E                     A++ +L   ++Q
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306

Query: 408 NSSPQEF--------------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
             + Q F              Y   +  LC+ G+  +A+++L EM +   TPD  TYSS+
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G C  G +++A ++F  M  ++  P    F  LL G  + +++  +  V + M+  G 
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 426

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           +P   TY +L++ +   D +E + E+  +++ ++
Sbjct: 427 IPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 460



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 5/288 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           K  +AF   E MV+ G  P + Q  N+L D +C A+ ++ A+++   M      PD ++Y
Sbjct: 410 KSREAFRVHEDMVNAGFIPGL-QTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTY 468

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+ CLC+   V  A + ++ ME      N    ++LV  LC  G ++++   LD +++
Sbjct: 469 APLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 528

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G  P   T+  L+E  Y  +   AA KLL    + G   +  +Y++ +  +CK G+ +E
Sbjct: 529 VGCQPLGETFKILVEELYLRKKWEAASKLLR---SPGFVADAATYSLCVAEICKAGKPDE 585

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+     +  KG  P+  +Y  +LRSLC   R E A     +M     +P +VTY +LIG
Sbjct: 586 AVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIG 645

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
                   D A ++ + MV   F P A +   + + L   G  DL+V+
Sbjct: 646 EACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLLVR 693


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 232/462 (50%), Gaps = 1/462 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           ++Y LC+  K+K+A +++  M      PD  SY+ +++  C  G +  A++L++ M+  G
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  TYNS++  LC +G   ++ + L  ++ + ++P+   Y+ L+   +K   V  A 
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           K  D++++K   P+ ++Y  L+ G  + G+  E    F ++ S+G +P+ V+Y  L+   
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G    A  L  EM     +P IVTY  LI  L  HG+ D A ++LDEM K   + + 
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNV 503

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQS 402
             YN ++  +C  G ++  +K + +M      P+  TY   +   C +G + +A  ++Q 
Sbjct: 504 CIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + ++        +  ++   C  G      +LL  M + G  PD+ TY++L++  C+   
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +    +I+  M      PD + +N L+ G CK+R    +  +++ MIEKG +P  T+Y  
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           L++    + +   + E+ +E++   +V++  +    +   +E
Sbjct: 684 LIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYE 725



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 151/303 (49%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
              M+S+G KPD V  T L+   CKA +M  A  +   MV  G+ P+  +Y  L++ LCK
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +L+++M   G   N   YNS+V G+C  GN+ Q+++ +  +   G+ P+A T
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++A  +   +  A KLL +++ +G +P +V++NVL+ G C  G  E+  R    + 
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+ ++YN L++  C+        ++   M     +P   TYNILI          
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +  EM++  + P+  SYN +I R   + K     +  ++M       +   YN   
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFV 720

Query: 386 MLC 388
            +C
Sbjct: 721 DMC 723



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 190/382 (49%), Gaps = 5/382 (1%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY-SFLLEAAYKERGVHAA 222
           +  N + ++   + L  +G+L+++ + LD+L+  GLV    +  +FL   A    G+  A
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           +K+  +    G   N  SYN+++  LC+ G+ +EA R    +  +   P+VVSY+ ++  
Sbjct: 246 IKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDG 302

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C  G  ++A +L+ +M      P   TYN +I  L   GK+  A KVL EM+  +  P 
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPD 362

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQ 401
              Y  +I      G V    K  D+M  ++  P+  TY  L    G  GKV E   +  
Sbjct: 363 NVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFH 422

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            + ++     +  Y  +I   C+ G+   AF L  EM + G TP+  TY +LI GLC  G
Sbjct: 423 EMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHG 482

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++ A E+   M +   + +V  +N+++ G+CK+   + ++++ + M   G  P+  TYT
Sbjct: 483 ELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542

Query: 522 ILVEGIAHQDELELSAEVLKEL 543
            +++      +++ + ++L+E+
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEM 564



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 170/361 (47%), Gaps = 7/361 (1%)

Query: 189 QFLDRLIQ--KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           QF  RLI   K   PN   +    +   +   +  A KLLD +++ G    + S N  L+
Sbjct: 174 QFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS 233

Query: 247 GLCKEGR-TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            +       E AI+ F +    G   N  SYNI++ SLC  G+ +EA+ LL +MD    +
Sbjct: 234 RIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST 290

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P +V+Y+ +I    + G+   ALK++D+M     +P+  +YN II  LC  GK     K 
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L +M  ++  P+   Y  L      +G V+ A      + +K+ S     Y  +I    +
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            GK  +   L +EM   G  PD  TY++LI   C  G +  A  +   M +    P++  
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + AL+ GLCK    D + E+   M +KG   N   Y  +V GI     +E + +++KE++
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530

Query: 545 L 545
           +
Sbjct: 531 V 531



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 73/154 (47%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L D    L  M+ KG  PD +    L+   C  N M    K+ + M + G+ PD+++Y  
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   CK  N+  A  L ++M + GY     +YN+L++         ++ +  + +   G
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHG 708

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           LV +   Y+F ++  Y+E  V   + L D+ I K
Sbjct: 709 LVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +RM ++G  PD      L+   CKA  +K+A  + + M+  G +P  +SY  L+    KK
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
                A +L E+M  +G   +   YN  V      G++  +L   D  I+K L+
Sbjct: 692 RKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLL 745


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 34/487 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   L +M  +G+ PDVV  + ++   C+  ++ K +K+ME +   G+ P+  +Y 
Sbjct: 267 KVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYN 326

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK G V  A Q++  M++     + V Y +L+ G    GN++   +  D + +K
Sbjct: 327 SIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK 386

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            +VP+  TY+ ++    +   V  A KL  ++++KG KP+ V+Y  L+ G CK G  +EA
Sbjct: 387 KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEA 446

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  KG  PNVV+Y  L+  LC  G  + ANELL EM      P + TYN LI  
Sbjct: 447 FSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALING 506

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A+K+++EM    F P   +Y  I+   C  G++    + L  M  +  +P 
Sbjct: 507 LCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPT 566

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             T+N L                                  +   C  G      +L+  
Sbjct: 567 IVTFNVL----------------------------------MNGFCMSGMLEDGERLIKW 592

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  P++ T++SL++  C+   +   +EI+  M      PD + +N L+ G CK+R 
Sbjct: 593 MLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARN 652

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +  + + M+EKG      +Y  L++G   + + E + ++ +E++    ++E  +  +
Sbjct: 653 MKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDI 712

Query: 558 VMQYDFE 564
            +  ++E
Sbjct: 713 FVDVNYE 719



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 221/455 (48%), Gaps = 2/455 (0%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN-VGYAMQLVEKMEDYGYPT 166
           L +A  + +A K+ + +++ G++    S    +  L    + +  A ++  +  + G   
Sbjct: 191 LVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCW 250

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           NTV+YN ++  LC LG + ++   L ++  +G VP+  +YS +++   +   +   +KL+
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           +++  KG KPN  +YN +++ LCK GR  EA +  R + ++   P+ V Y  L+      
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G      +L  EM      P  VTY  +I  L   GK   A K+  EM+    +P   +Y
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
             +I   C  G++       +QM  +   PN  TY  L   LC  G+V  A  ++  +  
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K        Y  +I  LC+ G   QA +L+ EM   GF PD+ TY++++   C  G + +
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A E+  +M +   +P +  FN L+ G C S   +    + + M++KG MPN TT+  L++
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
               ++ +  + E+ K +  + VV ++    ++++
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIK 645



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 146/295 (49%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +AF    +MV KG  P+VV  T L+  LCK  ++  A +++  M   G+ P+  +Y 
Sbjct: 442 EMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYN 501

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK GN+  A++L+E+M+  G+  +T+TY +++   C +G + ++ + L  ++ K
Sbjct: 502 ALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDK 561

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P   T++ L+        +    +L+  ++ KG  PN  ++N L+   C        
Sbjct: 562 GLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRAT 621

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I  ++ + ++G  P+  +YNIL++  C     +EA  L  EM     S T  +YN LI  
Sbjct: 622 IEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKG 681

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
                K + A K+ +EM    F      Y+  +     EG  +  ++  D+   +
Sbjct: 682 FYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 51/112 (45%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M ++G  PD      L+   CKA  MK+A  + + MV  G    A+SY  L+    K+  
Sbjct: 628 MHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKK 687

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
              A +L E+M  +G+      Y+  V      GN   +L+  D  I+K LV
Sbjct: 688 FEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLV 739


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 242/500 (48%), Gaps = 6/500 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GI 129
           D   R H+   A     +++  G + D++ A +LL   C+A +  +A+ ++       G 
Sbjct: 119 DCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGC 178

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--PTNTVTYNSLVRGLCMLGNLNQS 187
           +PD  SY+ L+  LC +G  G A  L+  M + G     + V YN+++ G    G++N++
Sbjct: 179 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKA 238

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                 ++Q+G+ P+  TYS ++ A  K R +  A   L  ++ KG  PN  +YN L+ G
Sbjct: 239 CDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG 298

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               G+ +EA+R F+++  +   P+VV++N+L+ SLC  G+ +EA ++   M    ++P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +YNI++   A  G       + D M+     P   ++N +I    + G +D  +   +
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 418

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRK 425
           +M     KPN  TY   +A LC +GK+ +A      + + Q  +P ++ Y  +I   C  
Sbjct: 419 EMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMID-QGVAPDKYAYHCLIQGFCTH 477

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A +L+ E+   G   D   +SS+I  LC  G + +A  IF +       P    +
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVY 537

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           + L+ G C   + + +L VF  M+  G  PN+  Y  LV G      ++    + +E+  
Sbjct: 538 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQ 597

Query: 546 RQVVSESAVERLVMQYDFEG 565
           + +   + +  +++   FE 
Sbjct: 598 KGIKPSTILYNIIIDGLFEA 617



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 228/465 (49%), Gaps = 3/465 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AFL+  +MV+KG  P+     NL+Y      + K+A++V + M    I+PD  ++  L+
Sbjct: 274 EAFLR--QMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCK G +  A  + + M   G   +  +YN ++ G    G L       D ++  G+ 
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P   T++ L++A      +  AM + +++   G KPN+++Y  ++  LC+ G+ ++A+  
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +  +G  P+  +Y+ L++  C  G   +A EL++E+        IV ++ +I +L  
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+   A  + D  V     P+A  Y+ ++   C  GK++  ++  D M     +PN+  
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  L    C +G++ E  ++ + +  K        Y  +I  L   G+T  A    +EMT
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G   +  TYS ++RGL      +EA+ +F  +   + K D+   N ++ G+ ++RR +
Sbjct: 632 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 691

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + ++F  +   G +P   TY+I++  +  +  +E + ++   +Q
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 219/471 (46%), Gaps = 10/471 (2%)

Query: 85  QLERMVSKGH---KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            L RM+++G     PDVV    ++    K   + KA  + + MV  GI PD  +Y+ +V+
Sbjct: 203 DLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVH 262

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK   +  A   + +M + G   N  TYN+L+ G    G   ++++    + ++ ++P
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP 322

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  T++ L+ +  K   +  A  + D +  KG  P++ SYN++L G   +G   +    F
Sbjct: 323 DVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 382

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G  P + ++N+L+++    G  ++A  +  EM      P ++TY  +I +L   
Sbjct: 383 DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRI 442

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQMFHRRCKPN 377
           GK D A++  ++M+     P   +Y+ +I   C+ G +    +L+ + ++   H      
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLF 502

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
               N    LC +G+V +A  I     N         Y  ++   C  GK  +A ++   
Sbjct: 503 SSIINN---LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  P+   Y +L+ G C  G I+E L +F  M +   KP    +N ++ GL ++ R
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           T  +   F  M E G   N+ TY+I++ G+      + +  + KEL+   V
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNV 670



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 194/452 (42%), Gaps = 39/452 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
           P + +Y  L++C  +      A+    ++   G   + +  N L++G C     +++L  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAA------------------------------------ 213
            L R  + G VP+ F+YS LL++                                     
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 214 -YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
            +KE  V+ A  L  +++ +G  P+ V+Y+ ++  LCK    ++A  F R + +KG  PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             +YN L+      G+W+EA  +  EM      P +VT+N+L+GSL  +GK   A  V D
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVG 391
            M      P   SYN ++    ++G +  +    D M      P   T+N L       G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            + +A  I   + +         Y  VI +LCR GK   A +   +M   G  PD Y Y 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            LI+G C  G + +A E+   +       D+  F++++  LCK  R   +  +F + +  
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           G  P    Y++L++G     ++E +  V   +
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 188/420 (44%), Gaps = 5/420 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    + M  KG  PDV     +L        +     + ++M+  GI P   ++ 
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFN 398

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+      G +  AM +  +M D+G   N +TY +++  LC +G ++ +++  +++I +
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQ 458

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ + Y  L++       +  A +L+ +I+  G   ++V ++ ++  LCK GR  +A
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDA 518

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F    + G  P  V Y++L+   C+ G+ E+A  +   M      P  V Y  L+  
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D  L +  EM++   +PS   YN II  L   G+         +M       N
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 638

Query: 378 EGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           + TY+   +L G+ K     EA  + + L              +I  + +  +  +A  L
Sbjct: 639 KCTYS--IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 696

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              +++ G  P   TYS +I  L  EGL+EEA ++F  M+    +PD    N ++  L K
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 178/385 (46%), Gaps = 41/385 (10%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P + TY+ L++   +      A+     ++  G + +++  N LL G C+  RT+EA+
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 259 R-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILI 315
                  P  G  P+V SY+ILL+SLC +G+  +A++LL  M  G    SP +V YN +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  + A  +  EMV+    P   +Y+ ++  LC    +D     L QM ++   
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQ 433
           PN  TYN L       G+ +EA  + + +  +Q+  P    +  ++ SLC+ GK  +A  
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSILPDVVTFNMLMGSLCKYGKIKEARD 345

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCME--------------------------------- 460
           +   M   G  PD ++Y+ ++ G   +                                 
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 405

Query: 461 --GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G++++A+ IF  M ++  KP+V  +  ++  LC+  + D ++E F  MI++G  P++ 
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465

Query: 519 TYTILVEGIAHQDELELSAEVLKEL 543
            Y  L++G      L  + E++ E+
Sbjct: 466 AYHCLIQGFCTHGSLLKAKELISEI 490



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 178/388 (45%), Gaps = 6/388 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A +    M   G KP+V+  T ++  LC+  KM  A++    M+  G+ PD  +Y  
Sbjct: 410 LDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C  G++  A +L+ ++ + G   + V ++S++  LC LG +  +    D  +  G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P A  YS L++       +  A+++ D +++ G +PN V Y  L+ G CK GR +E +
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  KG +P+ + YNI++  L   GR   A     EM     +    TY+I++  L
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 649

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +   D A+ +  E+     +    + N +IA +    +V+        +      P  
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCV 709

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ +   L   G V+EA  +  S+ N           +V+  L +K +  +A   L +
Sbjct: 710 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 769

Query: 438 MTKYGFTPDSYTYSSLI-----RGLCME 460
           + +  F+ +  T   L+     +G C E
Sbjct: 770 IDERNFSLEHLTTMLLVDLFSSKGTCRE 797



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 4/143 (2%)

Query: 410 SPQEFYKYVITSLC-RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           SP      ++   C R  +   A     ++ + G   D    + L++G C     +EAL+
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 167

Query: 469 IFV-VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM--PNETTYTILVE 525
           I +    E    PDV +++ LL  LC   ++  + ++ +MM E G +  P+   Y  +++
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVID 227

Query: 526 GIAHQDELELSAEVLKELQLRQV 548
           G   + ++  + ++ KE+  R +
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGI 250


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 230/485 (47%), Gaps = 22/485 (4%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA---------------IKVM 121
           HKL+ +     ++   G +PDVV    LL+ LC  +++ +A               + + 
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
           + MV  G+ P   ++  L+N LC +G V  A  LV KM   G   + VTY ++V G+C +
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           G+   +L  L ++ +  + P+   YS +++   K+     A  L  +++ KG  PN+ +Y
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           N ++ G C  GR  +A R  RD+  +   P+V+++N L+ +   EG+  EA +L  EM  
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P  VTYN +I     H + D A  + D M      P   ++N II   C   +VD 
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDE 450

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            ++ L ++  R    N  TYN L    C V  +  A  + Q + +            ++ 
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
             C   K  +A +L   +       D+  Y+ +I G+C    ++EA ++F  +  +  +P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570

Query: 481 DVDNFNALLLGLC-KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           DV  +N ++ G C KS  +D ++ +F  M + G  P+ +TY  L+ G     E++ S E+
Sbjct: 571 DVQTYNVMISGFCGKSAISDANV-LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629

Query: 540 LKELQ 544
           + E++
Sbjct: 630 ISEMR 634



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 227/490 (46%), Gaps = 18/490 (3%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L+DA    + MV        V    ++    + N+   AI +   M    I  + 
Sbjct: 82  HYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNI 141

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL----- 188
            S+  L+ C C    + +++    K+   G+  + VT+N+L+ GLC+   ++++L     
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201

Query: 189 ----------QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
                        D++++ GL P   T++ L+     E  V  A  L++ ++ KG   ++
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+Y  ++ G+CK G T+ A+     +     +P+VV Y+ ++  LC +G   +A  L +E
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M     +P + TYN +I      G+   A ++L +M++    P   ++N +I+    EGK
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           +    K  D+M HR   P+  TYN  +M+ G  K    F   + + +   S     +  +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYN--SMIYGFCK-HNRFDDAKHMFDLMASPDVVTFNTI 438

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I   CR  +  +  QLL E+++ G   ++ TY++LI G C    +  A ++F  M  +  
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PD    N LL G C++ + + +LE+F+++       +   Y I++ G+    +++ + +
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558

Query: 539 VLKELQLRQV 548
           +   L +  V
Sbjct: 559 LFCSLPIHGV 568



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 188/397 (47%), Gaps = 5/397 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           + +MV KG   DVV    ++  +CK    K A+ ++  M  + I PD   Y+ +++ LCK
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G+   A  L  +M + G   N  TYN ++ G C  G  + + + L  +I++ + P+  T
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+ A+ KE  +  A KL D+++ +   P+ V+YN ++ G CK  R ++A   F  + 
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S    P+VV++N ++   C   R +E  +LL E+          TYN LI         +
Sbjct: 429 S----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +  EM+     P   + N ++   C   K++  ++  + +   +   +   YN + 
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             +C   KV EA+ +  SL         + Y  +I+  C K     A  L ++M   G  
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           PD+ TY++LIRG    G I++++E+   M    +  D
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/494 (23%), Positives = 204/494 (41%), Gaps = 82/494 (16%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +  AI   + MV S     A     ++    +      A+ L  KME    P N  ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L++  C    L+ SL    +L + G                                   
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGF---------------------------------- 172

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF---------------EPNVVSYNI 278
            +P++V++N LL GLC E R  EA+  F  +   GF                P V+++N 
Sbjct: 173 -QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+  LC+EGR  EA  L+ +M G      +VTY  ++  +   G T  AL +L +M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
            +P    Y+ II RLC +G          +M  +   PN  TYN +    C  G+  +A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +++ +  ++ +     +  +I++  ++GK ++A +L  EM      PD+ TY+S+I G 
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 458 CMEGLIEEALEIFVVMEEYD---YKPDVD----------------------------NFN 486
           C     ++A  +F +M   D   +   +D                             +N
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            L+ G C+    + + ++FQ MI  G  P+  T  IL+ G    ++LE + E+ + +Q+ 
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531

Query: 547 QVVSESAVERLVMQ 560
           ++  ++    +++ 
Sbjct: 532 KIDLDTVAYNIIIH 545



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 144/286 (50%), Gaps = 5/286 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL +A    + M+ +   PD V   +++Y  CK N+   A  + ++M S    PD  
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 433

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  +++  C+   V   MQL+ ++   G   NT TYN+L+ G C + NLN +      +
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I  G+ P+  T + LL    +   +  A++L + I       + V+YN+++ G+CK  + 
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F  LP  G EP+V +YN+++   C +    +AN L  +M      P   TYN L
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           I      G+ D +++++ EM    F   A +   ++A L ++G++D
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLD 658



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 156/360 (43%), Gaps = 6/360 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D   +DA      M+ KG  P+V     ++   C   +   A +++  M+   I PD  
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++   K+G +  A +L ++M       +TVTYNS++ G C     + +    D +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                 P+  T++ +++   + + V   M+LL +I  +G   N  +YN L+ G C+    
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F+++ S G  P+ ++ NILL   C   + EEA EL   +         V YNI+
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +    K D A  +   +      P   +YN +I+  C +  +        +M     
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603

Query: 375 KPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+  TYN L   C   G++ ++  +I  +      S   F   ++  L   G+  ++F 
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVADLITDGRLDKSFS 662



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 156/381 (40%), Gaps = 32/381 (8%)

Query: 193 RLIQKGL--VPNAFTYSFLLEAAYKERGVHAAMKLLDDII-----AKGGKP--NLVSYNV 243
           R+ +KG   +P+    +F  E    + G H   K LDD I         +P    V  N 
Sbjct: 53  RVAEKGTKSLPSLTQVTFEGEELKLKSGSHY-FKSLDDAIDFFDYMVRSRPFYTAVDCNK 111

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++    +  R + AI  +R +  +    N+ S+NIL++  C   +   +     ++    
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VT+N L+  L    +   AL +   MV+  F  + A +                 
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF----------------- 214

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
              DQM      P   T+N L   LC  G+V EA A++  +  K        Y  ++  +
Sbjct: 215 ---DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ G T  A  LL +M +    PD   YS++I  LC +G   +A  +F  M E    P+V
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N ++ G C   R   +  + + MIE+   P+  T+  L+     + +L   AE L +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL-FEAEKLCD 390

Query: 543 LQLRQVVSESAVERLVMQYDF 563
             L + +    V    M Y F
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGF 411


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 233/462 (50%), Gaps = 1/462 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           ++Y LC+  K+K+A +++  M      PD  SY+ +++  C  G +  A++L++ M+  G
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  TYNS++  LC +G   ++ + L  ++ + ++P+   Y+ L+   +K   V  A 
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           K  D++++K   P+ ++Y  L+ G  + G+  E    F ++ S+G +P+ V+Y  L+   
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G    A  L  EM     +P IVTY  LI  L  HG+ D A ++LDEM K   + + 
Sbjct: 444 CKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNV 503

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQS 402
             YN ++  +C  G ++  +K + +M      P+  TY   +   C +G + +A  ++Q 
Sbjct: 504 CIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + ++        +  ++   C  G      +LL  M + G  PD+ TY++L++  C+   
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +    +I+  M      PD + +N L+ G CK+R    +  +++ MIEKG +P  T+Y  
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           L++    + ++  + E+ +E++   +V++  +    +   +E
Sbjct: 684 LIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYE 725



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 152/303 (50%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
              M+S+G KPD V  T L+   CKA +M  A  +   MV  G+ P+  +Y  L++ LCK
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +L+++M   G   N   YNS+V G+C  GN+ Q+++ +  +   G+ P+A T
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++A  +   +  A KLL +++ +G +P +V++NVL+ G C  G  E+  R    + 
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+ ++YN L++  C+        ++   M     +P   TYNILI          
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +  EM++  + P+  SYN +I R   + K+    +  ++M       +   YN   
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFV 720

Query: 386 MLC 388
            +C
Sbjct: 721 DMC 723



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 190/382 (49%), Gaps = 5/382 (1%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY-SFLLEAAYKERGVHAA 222
           +  N + ++   + L  +G+L+++ + LD+L+  GLV    +  +FL   A    G+  A
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMA 245

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           +K+  +    G   N  SYN+++  LC+ G+ +EA R    +  +   P+VVSY+ ++  
Sbjct: 246 IKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDG 302

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C  G  ++A +L+ +M      P   TYN +I  L   GK+  A KVL EM+  +  P 
Sbjct: 303 YCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPD 362

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQ 401
              Y  +I      G V    K  D+M  ++  P+  TY  L    G  GKV E   +  
Sbjct: 363 NVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFH 422

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            + ++     +  Y  +I   C+ G+   AF L  EM + G TP+  TY +LI GLC  G
Sbjct: 423 EMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHG 482

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++ A E+   M +   + +V  +N+++ G+CK+   + ++++ + M   G  P+  TYT
Sbjct: 483 ELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542

Query: 522 ILVEGIAHQDELELSAEVLKEL 543
            +++      +++ + ++L+E+
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEM 564



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 170/361 (47%), Gaps = 7/361 (1%)

Query: 189 QFLDRLIQ--KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           QF  RLI   K   PN   +    +   +   +  A KLLD +++ G    + S N  L+
Sbjct: 174 QFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLS 233

Query: 247 GLCKEGR-TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            +       E AI+ F +    G   N  SYNI++ SLC  G+ +EA+ LL +MD    +
Sbjct: 234 RIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST 290

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P +V+Y+ +I    + G+   ALK++D+M     +P+  +YN II  LC  GK     K 
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L +M  ++  P+   Y  L      +G V+ A      + +K+ S     Y  +I    +
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            GK  +   L +EM   G  PD  TY++LI   C  G +  A  +   M +    P++  
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + AL+ GLCK    D + E+   M +KG   N   Y  +V GI     +E + +++KE++
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530

Query: 545 L 545
           +
Sbjct: 531 V 531



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 74/154 (48%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L D    L  M+ KG  PD +    L+   C  N M    K+ + M + G+ PD+++Y  
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   CK  N+  A  L ++M + GY     +YN+L++       + ++ +  + +   G
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHG 708

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           LV +   Y+F ++  Y+E  V   + L D+ I K
Sbjct: 709 LVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +RM ++G  PD      L+   CKA  +K+A  + + M+  G +P  +SY  L+    KK
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             +  A +L E+M  +G   +   YN  V      G++  +L   D  I+K L+
Sbjct: 692 KKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLL 745


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 235/478 (49%), Gaps = 2/478 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ + S G KPDV   T ++  LC  N       V+ +M   G+ P   ++  L+N LC 
Sbjct: 94  IKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCA 153

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL-VPNAF 204
           +GNV  A +  + +ED G+ +N+ TY +++ GLC  G+ + ++ +L+++  +   +    
Sbjct: 154 EGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVI 213

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            YS ++++  K+  V  A+ L   + +KG +P+LV+YN L+ GLC  GR +EA     ++
Sbjct: 214 AYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNM 273

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             KG  PNV ++N+L+ + C +G    A  ++  M      P +VTYN +I       + 
Sbjct: 274 MRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQM 333

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A+KV + M+   F P+  +Y+ +I   C    ++  +  L +M +    P+  T++ L
Sbjct: 334 GDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTL 393

Query: 385 -AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C  GK + A  +  ++         +    ++  L +     +A  L  EM K   
Sbjct: 394 IGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNL 453

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             +   Y+ ++ G+C  G + +A E+F  +     K DV  +  ++ GLCK    D +  
Sbjct: 454 ELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAEN 513

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +   M E G +PNE TY + V G+  + ++  S + L  ++ + + +++    L++ Y
Sbjct: 514 LLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISY 571



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 159/312 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +D  + +A      M SKG +PD+V   +L++ LC   + K+A  ++  M+  GI+
Sbjct: 220 DSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIM 279

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  LV+  CK G +  A  ++  M   G   + VTYNS++ G C+L  +  +++ 
Sbjct: 280 PNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKV 339

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +I KG +PN  TYS L+    K + ++ A+ LL +++  G  P++V+++ L+ G CK
Sbjct: 340 FELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCK 399

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E A   F  +      PN+ +  I+L  L       EA  L  EM+  +    +V 
Sbjct: 400 AGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVI 459

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI++  +   GK + A ++   +     +    +Y  +I  LC EG +D     L +M 
Sbjct: 460 YNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKME 519

Query: 371 HRRCKPNEGTYN 382
              C PNE TYN
Sbjct: 520 ENGCLPNEFTYN 531



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 190/425 (44%), Gaps = 36/425 (8%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           A L LE++  +    DVV A + + D LCK   + +A+ +   M S GI PD  +Y  L+
Sbjct: 195 AILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLI 254

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           + LC  G    A  L+  M   G   N  T+N LV   C  G ++++   +  ++  G+ 
Sbjct: 255 HGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVE 314

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ ++        +  A+K+ + +I KG  PNLV+Y+ L+ G CK     +A+  
Sbjct: 315 PDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFL 374

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++ + G  P+VV+++ L+   C  G+ E A EL   M   D+ P + T  I++  L  
Sbjct: 375 LGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFK 434

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                 A+ +  EM K     +   YN ++  +CS GK++                    
Sbjct: 435 CQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLN-------------------- 474

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
                        QE F+ + S G K +      Y  +I  LC++G    A  LL +M +
Sbjct: 475 -----------DAQELFSCLPSKGIKIDVVA---YTTMIKGLCKEGLLDDAENLLMKMEE 520

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P+ +TY+  +RGL     I  + +  ++M+      D      LL+    + + + 
Sbjct: 521 NGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATT-TELLISYFSANKENS 579

Query: 501 SLEVF 505
           +L VF
Sbjct: 580 ALHVF 584



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 2/277 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +  +A   L  M+ KG  P+V Q  N+L D  CK   + +A  +M  MV  G+ PD  +Y
Sbjct: 262 RWKEATTLLGNMMRKGIMPNV-QTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTY 320

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +++  C    +G A+++ E M   G+  N VTY+SL+ G C   N+N++L  L  ++ 
Sbjct: 321 NSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVN 380

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            GL P+  T+S L+    K     AA +L   +      PNL +  ++L GL K     E
Sbjct: 381 SGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSE 440

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           AI  FR++     E NVV YNI+L  +C  G+  +A EL + +        +V Y  +I 
Sbjct: 441 AISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIK 500

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L   G  D A  +L +M +    P+  +YN  +  L
Sbjct: 501 GLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL 537



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 2/325 (0%)

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           AA+     ++     P    +  L   + K       I   + + S G +P+V +  I++
Sbjct: 54  AALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIII 113

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC          +L  M      PT+VT+  LI  L   G    A +  D +     +
Sbjct: 114 NCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQ 173

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM--LCGVGKVQEAFA 398
            ++ +Y  II  LC  G     +  L+++  R C  +        M  LC  G V EA  
Sbjct: 174 SNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALN 233

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +   + +K        Y  +I  LC  G+  +A  LL  M + G  P+  T++ L+   C
Sbjct: 234 LFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFC 293

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            +G+I  A  I   M     +PDV  +N+++ G C   +   +++VF++MI KG +PN  
Sbjct: 294 KDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLV 353

Query: 519 TYTILVEGIAHQDELELSAEVLKEL 543
           TY+ L+ G      +  +  +L E+
Sbjct: 354 TYSSLIHGWCKTKNINKALFLLGEM 378



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 2/259 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    E M+ KG  P++V  ++L++  CK   + KA+ ++  MV+SG+ PD  +++
Sbjct: 332 QMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWS 391

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK G    A +L   M ++    N  T   ++ GL      ++++     + + 
Sbjct: 392 TLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKM 451

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L  N   Y+ +L+       ++ A +L   + +KG K ++V+Y  ++ GLCKEG  ++A
Sbjct: 452 NLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDA 511

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +   G  PN  +YN+ +R L        + + L  M G   S    T  +LI  
Sbjct: 512 ENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISY 571

Query: 318 LAYHGKTDHALKV-LDEMV 335
            + + K + AL V L E V
Sbjct: 572 FSAN-KENSALHVFLQEFV 589


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 239/468 (51%), Gaps = 8/468 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLC 144
            + MV  G   DV     L+   C   K++ A+ ++E MVS   + PD  +Y  ++  + 
Sbjct: 192 FDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMS 251

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           KKG +     L+  M+  G   N VTYN+LV G C LG+L ++ Q ++ + Q  ++P+  
Sbjct: 252 KKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLC 311

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+ L+        +   ++L+D + +   +P++V+YN L+ G  + G + EA +    +
Sbjct: 312 TYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQM 371

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEAN---ELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            + G +PN V++NI L+ LC E + EE     + L EM G   SP IVTY+ LI +    
Sbjct: 372 ENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHG--FSPDIVTYHTLIKAYLKV 429

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    AL+++ EM +   + +  + N I+  LC E KVD     LD    R    +E TY
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTY 489

Query: 382 NGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L M      KV++AF +   +   + +     +  +I  LC  GKT  A +   E+ +
Sbjct: 490 GTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAE 549

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD  T++S+I G C EG +E+A E +    ++ +KPD    N LL GLCK   T+ 
Sbjct: 550 SGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +L  F  +I + ++ +  TY  ++       +L+ + ++L E++ +++
Sbjct: 610 ALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRL 656



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 230/469 (49%), Gaps = 4/469 (0%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           KL DA   LERMVS+ +  PD V    +L  + K  ++     ++  M  +G++P+  +Y
Sbjct: 219 KLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTY 278

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             LV   CK G++  A Q+VE M+      +  TYN L+ G+C  G++ + L+ +D +  
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKS 338

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             L P+  TY+ L++  ++      A KL++ +   G KPN V++N+ L  LCKE + EE
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREE 398

Query: 257 AIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
             R  ++L    GF P++V+Y+ L+++    G    A E++ EM         +T N ++
Sbjct: 399 VTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            +L    K D A  +LD   K  +     +Y  +I     E KV+   +  D+M   +  
Sbjct: 459 DALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKIT 518

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P   T+N L   LC  GK + A      L           +  +I   C++G+  +AF+ 
Sbjct: 519 PTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEF 578

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             E  K+ F PD+YT + L+ GLC EG+ E+AL  F  +   + + D   +N ++   CK
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIT-EREVDTVTYNTMISAFCK 637

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            ++   + ++   M EK   P+  TY  ++  +    +L  + E+LK+ 
Sbjct: 638 DKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKF 686



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 214/438 (48%), Gaps = 6/438 (1%)

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK---KGNVGYAMQLVEKMEDYGYPTN 167
           A K   A++V + M+   + P+  +   L+  L +     ++  A ++ + M   G   +
Sbjct: 144 AGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLD 203

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
             T+N LV G C+ G L  +L  L+R++ +  + P+  TY+ +L+A  K+  +     LL
Sbjct: 204 VKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLL 263

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            D+   G  PN V+YN L+ G CK G  +EA +    +      P++ +YNIL+  +C  
Sbjct: 264 LDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNA 323

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G   E  EL+  M      P +VTYN LI      G +  A K++++M     +P+  ++
Sbjct: 324 GSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTH 383

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRR-CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG 404
           N  +  LC E K + V + + ++       P+  TY+ L      VG +  A  +++ +G
Sbjct: 384 NISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K           ++ +LC++ K  +A  LL    K G+  D  TY +LI G   E  +E
Sbjct: 444 QKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVE 503

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A E++  M+     P V  FN+L+ GLC   +T+L++E F  + E G +P++ T+  ++
Sbjct: 504 KAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSII 563

Query: 525 EGIAHQDELELSAEVLKE 542
            G   +  +E + E   E
Sbjct: 564 LGYCKEGRVEKAFEFYNE 581



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 23/386 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAI-KVMEMMVSSGIIPDASSYTYLVNCLC 144
           +E+M + G KP+ V     L  LCK  K ++   KV E++   G  PD  +Y  L+    
Sbjct: 368 MEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYL 427

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K G++  A++++ +M   G   NT+T N+++  LC    ++++   LD   ++G + +  
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEV 487

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY  L+   ++E  V  A ++ D++      P + ++N L+ GLC  G+TE A+  F +L
Sbjct: 488 TYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDEL 547

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G  P+  ++N ++   C EGR E+A E   E       P   T NIL+  L   G T
Sbjct: 548 AESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG- 383
           + AL   + ++  R      +YN +I+  C + K+      L +M  +R +P+  TYN  
Sbjct: 608 EKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSI 666

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY----KYVITSLCRKGKTYQAFQLLYEMT 439
           +  L   GK+ EA  +++    K  S  +  +    K   TS                 +
Sbjct: 667 ITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATS----------------ES 710

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K     ++  YS +I  LC  G ++E
Sbjct: 711 KEELKTEAIAYSDVINELCSRGRLKE 736



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 185/369 (50%), Gaps = 6/369 (1%)

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK---ERGVHAAMKLLDDIIAKGGKPNL 238
           G  + +LQ   ++I+  L PN  T + LL    +      + +A ++ DD++  G   ++
Sbjct: 145 GKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDV 204

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLA 297
            ++NVL+ G C EG+ E+A+     + S+    P+ V+YN +L+++  +GR  +  +LL 
Sbjct: 205 KTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLL 264

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +M      P  VTYN L+      G    A ++++ M +    P   +YN +I  +C+ G
Sbjct: 265 DMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAG 324

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
            +   ++ +D M   + +P+  TYN L   C  +G   EA  +++ + N      Q  + 
Sbjct: 325 SIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHN 384

Query: 417 YVITSLCRKGKTYQAFQLLYEMTK-YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +  LC++ K  +  + + E+ + +GF+PD  TY +LI+     G +  ALE+   M +
Sbjct: 385 ISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              K +    N +L  LCK R+ D +  +     ++G + +E TY  L+ G   ++++E 
Sbjct: 445 KGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEK 504

Query: 536 SAEVLKELQ 544
           + E+  E++
Sbjct: 505 AFEMWDEMK 513



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 32/308 (10%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A   +  M  KG K + +    +L  LCK  K+ +A  +++     G I D  +Y  
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGT 491

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+    ++  V  A ++ ++M+         T+NSL+ GLC  G    +++  D L + G
Sbjct: 492 LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L+P+  T++ ++    KE  V  A +  ++ I    KP+  + N+LL GLCKEG TE+A+
Sbjct: 552 LLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            FF  L ++  E + V+YN ++ + C + + +EA +LL+EM+     P   TYN +I SL
Sbjct: 612 NFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSL 670

Query: 319 AYHGKTDHALKVLDEMVK---GRF------------------------RPSAASYNPIIA 351
              GK   A    DE++K   G+F                        +  A +Y+ +I 
Sbjct: 671 MEDGKLSEA----DELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVIN 726

Query: 352 RLCSEGKV 359
            LCS G++
Sbjct: 727 ELCSRGRL 734



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 32/187 (17%)

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAII 400
           PS A ++  ++     GK  + ++   +M   + KPN  T N L  L G+ +   +F+I 
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTL--LIGLVRYPSSFSI- 185

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
                   +S +E +                     +M K G + D  T++ L+ G C+E
Sbjct: 186 --------ASAREVFD--------------------DMVKIGVSLDVKTFNVLVNGYCLE 217

Query: 461 GLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           G +E+AL +   M  E++  PD   +N +L  + K  R     ++   M   G +PN  T
Sbjct: 218 GKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVT 277

Query: 520 YTILVEG 526
           Y  LV G
Sbjct: 278 YNNLVYG 284


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 192/362 (53%), Gaps = 1/362 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M+  G +PD+V  T+LL+  C  N+++ A+ + + +V  G  P+  +YT L++CLCK
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             ++ +A+++  +M D G   N VTYNSLV GLC +G  + +   L  ++++G+ PN  T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L++A  K   +  A +L   +I     P++ +Y  L+ GLC  GR +EA + F  + 
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S G+ PN V+Y  L+   C   R E+  ++  EM         +TY +LI      G+ D
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A +V ++M   R  P   +YN ++  LC  G V+  +     M  R    N  TY  + 
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIII 439

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             +C VGKV++AF +  SL +K        Y  +I+  CR+G  ++A  L  +M + GF 
Sbjct: 440 QGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFL 499

Query: 445 PD 446
           P+
Sbjct: 500 PN 501



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 1/443 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + N+A     RMV     P +V  T LL  + K  +    I + E M   GI P   +  
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++NC+C+      A   + KM   G+  + VT+ SL+ G C    +  +L   D+++  
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  TY+ L+    K R ++ A+++ + +   G +PN+V+YN L++GLC+ GR  +A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               RD+  +G +PNV+++  L+ +    G+  EA EL   M      P + TY  LI  
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +G+ D A ++   M    + P+  +Y  +I   C   +V+   K   +M  +    N
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L    C VG+   A  +   +G+++       Y  ++  LC  G   +A  +  
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFK 421

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M K     +  TY+ +I+G+C  G +E+A ++F  +     KP+V  +  ++ G C+  
Sbjct: 422 YMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 481

Query: 497 RTDLSLEVFQMMIEKGQMPNETT 519
               +  +F+ M E G +PNE+ 
Sbjct: 482 FIHEADALFKKMKEDGFLPNESV 504



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 202/433 (46%), Gaps = 1/433 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           +  +A+ +   MV S  +P    +T L++ + K       + L E+M+  G      T N
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            ++  +C      ++  FL ++++ G  P+  T++ LL        +  A+ L D I+  
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G +PN+V+Y  L+  LCK      A+  F  +   G  PNVV+YN L+  LC  GRW +A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL +M      P ++T+  LI +    GK   A ++   M++    P   +Y  +I  
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
           LC+ G++D   +    M      PNE TY  L    C   +V++   I   +  K   + 
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I   C  G+   A ++  +M      PD  TY+ L+ GLC  G +E+AL IF 
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFK 421

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M + +   ++  +  ++ G+CK  + + + ++F  +  KG  PN  TYT ++ G   + 
Sbjct: 422 YMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 481

Query: 532 ELELSAEVLKELQ 544
            +  +  + K+++
Sbjct: 482 FIHEADALFKKMK 494



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 3/379 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            N++L    R++    +P+   ++ LL    K +     + L + +   G  P L + N+
Sbjct: 63  FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++  +C+  +   A  F   +   GFEP++V++  LL   C   R E+A  L  ++ G  
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  LI  L  +   +HA+++ ++M     RP+  +YN +++ LC  G+     
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
             L  M  R  +PN  T+  L      VGK+ EA  + + +  + +  P  F Y  +I  
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVM-IQMSVYPDVFTYTALING 301

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC  G+  +A Q+ Y M   G+ P+  TY++LI G C    +E+  +IF  M +     +
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              +  L+ G C   R D++ EVF  M  +   P+  TY +L++G+ +   +E +  + K
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFK 421

Query: 542 ELQLRQVVSESAVERLVMQ 560
            ++ R++        +++Q
Sbjct: 422 YMRKREMDINIVTYTIIIQ 440



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 35/337 (10%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++ DA    +++V  G +P+VV  T L++ LCK   +  A+++   M  +GI P+  +Y
Sbjct: 166 NRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTY 225

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT-------------------------- 170
             LV+ LC+ G    A  L+  M   G   N +T                          
Sbjct: 226 NSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQ 285

Query: 171 ---------YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
                    Y +L+ GLC  G L+++ Q    +   G  PN  TY+ L+    K + V  
Sbjct: 286 MSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVED 345

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
             K+  ++  KG   N ++Y VL+ G C  GR + A   F  + S+   P++ +YN+LL 
Sbjct: 346 GTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLD 405

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC  G  E+A  +   M   +    IVTY I+I  +   GK + A  +   +     +P
Sbjct: 406 GLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKP 465

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
           +  +Y  +I+  C  G +        +M      PNE
Sbjct: 466 NVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNE 502



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 135/322 (41%), Gaps = 36/322 (11%)

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE- 333
           +Y  +LR+     ++ EA +L   M      P+IV +  L+  +A   + D  + + ++ 
Sbjct: 49  NYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM 108

Query: 334 ----------------------------------MVKGRFRPSAASYNPIIARLCSEGKV 359
                                             M+K  F P   ++  ++   C   ++
Sbjct: 109 QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRI 168

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           +  +   DQ+     +PN  TY  L   LC    +  A  I   +G+         Y  +
Sbjct: 169 EDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSL 228

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           ++ LC  G+   A  LL +M K G  P+  T+++LI      G I EA E++ VM +   
Sbjct: 229 VSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSV 288

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PDV  + AL+ GLC   R D + ++F +M   G  PNE TYT L+ G      +E   +
Sbjct: 289 YPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTK 348

Query: 539 VLKELQLRQVVSESAVERLVMQ 560
           +  E+  + +V+ +    +++Q
Sbjct: 349 IFYEMSQKGLVANTITYTVLIQ 370


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 234/460 (50%), Gaps = 16/460 (3%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M+  G  PD   +T+ +   C++  +  A +V E M +   +    SY  L++ LC+ G
Sbjct: 217 KMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEV----SYNQLIHGLCEAG 272

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A+ L  +M+D     N  TY +L++GLC   N+++++  LD ++++ LVP+  TY+
Sbjct: 273 RIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYN 331

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    +   + +A +LL  +  +G  P+  +Y   +  LCK  R EEA R F  L  +
Sbjct: 332 SLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEE 391

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G   NV+ Y++L+   C  G+ +EA  L  +M   + SP   T+N LI  L   G    A
Sbjct: 392 GVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEA 451

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
           L + D+MVK   +P+  ++N +I R+  +G  D   KCL +M     KP   TYN  + +
Sbjct: 452 LSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEV 511

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            C  GKVQEA  ++  +  ++   P +F Y  +I +  + G TY AF +L  M      P
Sbjct: 512 YCSAGKVQEAEDMMVQM-KEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEP 570

Query: 446 DSYTYSSLIRGLCMEG-LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
             +T+ SLI+ L  +  ++E++ E  V  E      DV   N     + K    D+ +E+
Sbjct: 571 SHHTFLSLIKQLFDKRYVVEKSGETGV--ESVSNFGDVPGSN-----MWKMMEFDIVIEL 623

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F+ M + G  P+   Y  L+ GI   + L ++ ++L ++Q
Sbjct: 624 FEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQ 663



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 230/500 (46%), Gaps = 35/500 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++ AF   E M ++      V    L++ LC+A ++ +A+ +   M      P+  
Sbjct: 239 RSKDVDSAFRVFEEMPNRNE----VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVY 294

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+  LC+K NV  AM L+++M +     + +TYNSL+ G C  G+L+ + + L  +
Sbjct: 295 TYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLM 353

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++GLVP+  TY   ++   K   V  A +L D +  +G   N++ Y+VL+ G CK G+ 
Sbjct: 354 KERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKV 413

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F  + SK   PN  ++N L+  LC  G  +EA  L  +M      PT+ T+NIL
Sbjct: 414 DEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNIL 473

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG +   G  D A K L +M+    +P A +YN  I   CS GKV      + QM     
Sbjct: 474 IGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGV 533

Query: 375 KPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ--- 430
            P++ TY  L    G +G    AF +++S+ +         +  +I  L  K    +   
Sbjct: 534 PPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSG 593

Query: 431 --------------------------AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                                       +L  EM K+G TPDS  Y  LI G+C    + 
Sbjct: 594 ETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLG 653

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            AL++   M++    P    FNA++   CK ++   +  + + MI  G  P       L+
Sbjct: 654 IALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLI 713

Query: 525 EGIAHQDELELSAEVLKELQ 544
            G+  + E E    V K+L+
Sbjct: 714 CGLYEEGETERGNSVFKKLR 733



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 188/393 (47%), Gaps = 8/393 (2%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L+  L + G V    QL  +M +     +  T+N ++   C +G + ++ QF+ ++I
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           Q GL P+ FT +  +    + + V +A ++ +++  +    N VSYN L+ GLC+ GR +
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA+  F  +      PNV +Y  L++ LC +    +A  LL EM   +  P ++TYN LI
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNV-HKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  D A ++L  M +    P   +Y   I  LC   +V+   +  D +      
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQ 433
            N   Y+ L    C VGKV EA  + + + +K N SP  + +  +I  LC  G   +A  
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK-NCSPNAYTFNALIHGLCSAGNLKEALS 453

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  +M K G  P  YT++ LI  +  +G  ++A +    M     KP    +NA +   C
Sbjct: 454 LFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYC 513

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            + +   + ++   M E+G  P++ TYT L++ 
Sbjct: 514 SAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKA 546



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 197/431 (45%), Gaps = 30/431 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   L+ A+  L  M  +G  PD       +  LCK+N++++A ++ + +   G+  +  
Sbjct: 339 RAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVI 398

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y+ L++  CK G V  A  L EKM       N  T+N+L+ GLC  GNL ++L   D++
Sbjct: 399 MYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQM 458

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ GL P  +T++ L+    K+     A K L  +++ G KP   +YN  +   C  G+ 
Sbjct: 459 VKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKV 518

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA      +  +G  P+  +Y  L+++    G    A ++L  M   D  P+  T+  L
Sbjct: 519 QEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSL 578

Query: 315 IGSL-------AYHGKT----------------------DHALKVLDEMVKGRFRPSAAS 345
           I  L          G+T                      D  +++ +EM K    P +  
Sbjct: 579 IKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKC 638

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLG 404
           Y  +I+ +C    + + +K LDQM      P+E  +N  ++  C + K  EA  I++ + 
Sbjct: 639 YEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMI 698

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
              +S   E  K +I  L  +G+T +   +  ++   G+  D   +  LI G+  +GL+E
Sbjct: 699 CSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVE 758

Query: 465 EALEIFVVMEE 475
           E  ++F  ME+
Sbjct: 759 EFSQLFEEMEK 769



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 138/317 (43%), Gaps = 8/317 (2%)

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           DDI     K +L  YN LLT L + G  +E  + + ++  +    ++ ++N+++   C  
Sbjct: 150 DDIT----KLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKM 205

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G  +EA + + +M     SP   T    I         D A +V +EM       +  SY
Sbjct: 206 GFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP----NRNEVSY 261

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
           N +I  LC  G++D  V    +M    C PN  TY  L        V +A  ++  +  +
Sbjct: 262 NQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLER 321

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  +I   CR G    A++LL  M + G  PD  TY   I  LC    +EEA
Sbjct: 322 NLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEA 381

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             +F  + E     +V  ++ L+ G CK  + D +  +F+ M+ K   PN  T+  L+ G
Sbjct: 382 RRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHG 441

Query: 527 IAHQDELELSAEVLKEL 543
           +     L+ +  +  ++
Sbjct: 442 LCSAGNLKEALSLFDQM 458



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 6/174 (3%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
            ++L E+ME +G   ++  Y  L+ G+C + NL  +L+ LD++ ++G+ P+   ++ ++ 
Sbjct: 620 VIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVIS 679

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K +    A  +++D+I  G  P L     L+ GL +EG TE     F+ L   G+  
Sbjct: 680 CCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYND 739

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMD--GGDRSPTIVTYNILIGSLAYHGK 323
           + +++ IL+  +  +G  EE ++L  EM+  G + SP   TY+IL   L  HGK
Sbjct: 740 DEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPR--TYSILTQKL--HGK 789



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/336 (21%), Positives = 138/336 (41%), Gaps = 29/336 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A    ++MV  G KP V     L+  + K      A K ++ M+SSG  P A +Y  
Sbjct: 448 LKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNA 507

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            +   C  G V  A  ++ +M++ G P +  TY SL++    LG    +   L  +    
Sbjct: 508 FIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDAD 567

Query: 199 LVPNAFTYSFLLEAAYKER---------GVHAA--------------------MKLLDDI 229
             P+  T+  L++  + +R         GV +                     ++L +++
Sbjct: 568 CEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEM 627

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
              G  P+   Y  L++G+CK      A++    +  +G  P+ + +N ++   C   ++
Sbjct: 628 EKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKY 687

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            EA  ++ +M     SP +     LI  L   G+T+    V  ++    +     ++  +
Sbjct: 688 GEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKIL 747

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           I  +  +G V+   +  ++M    C  +  TY+ L 
Sbjct: 748 IDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILT 783



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 8/212 (3%)

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAII 400
           S   YN ++  L   G VD + +   +M       +  T+N  + + C +G V+EA   +
Sbjct: 156 SLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFM 215

Query: 401 QSLGNKQNSSPQEFYKY-VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
             +  +   SP  F     I   CR      AF++  EM       +  +Y+ LI GLC 
Sbjct: 216 CKM-IQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCE 270

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G I+EA+ +FV M++    P+V  + AL+ GLC+ +    ++ +   M+E+  +P+  T
Sbjct: 271 AGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLIT 329

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           Y  L+ G      L+ +  +L  ++ R +V +
Sbjct: 330 YNSLIAGQCRAGHLDSAYRLLSLMKERGLVPD 361


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 236/469 (50%), Gaps = 18/469 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA    E ++      D V    L+   C+A ++  A +++  + +SG   D  +Y 
Sbjct: 108 RLADA----EGVLRASEAADAVDHNTLVAGYCRAGRLADAERMLRSLAASGAA-DVVTYN 162

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+ G +  A  LV  M       N+  YN+L++GLC       + + ++ + + 
Sbjct: 163 TLIAGYCRGGRLEDARLLVASMPPA---PNSYAYNTLLKGLCSAKQWGDAEELVEEMTRN 219

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+  T+  L+ +  +   V  AM +LD +   G  P  + YN +++   + GR +EA
Sbjct: 220 DSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEA 279

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +P K   P++ SYN +L+ LC   RWE+A EL+ EM   D SP  VT+N +I  
Sbjct: 280 LHLFSCMPCK---PDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISF 336

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L + G  D AL+V+D+M K   +P   +Y+ +I     +G V+  ++ L  M    C PN
Sbjct: 337 LCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSM---PCSPN 393

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              Y   L  LC  G+ ++   +I  +     +  +  +  +I  LC++G      ++L 
Sbjct: 394 TVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQ 453

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+  YG +PD   Y+SL+ G    G ++++L++F  M     KP+   +N +L+GLCK  
Sbjct: 454 EVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLCKVE 510

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
             + + ++   M+ +   PNE T++IL+  +  +  +E + +V +++Q+
Sbjct: 511 LWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQM 559



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 234/510 (45%), Gaps = 42/510 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA   +E M      PD +    L++  C++  + +A+ +++ M   G  P A  Y 
Sbjct: 205 QWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYN 264

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++C  + G V  A+ L   M       +  +YN++++GLC       + + +  +++K
Sbjct: 265 EIISCFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRK 321

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+  T++ ++     +  V  A++++D +   G KP+  +Y+ L+    ++G  E+A
Sbjct: 322 DCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDA 381

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   R +P     PN V Y  +L+ LC +G+WE+  +L+ EM   D +P  + + ++I  
Sbjct: 382 LELLRSMPCS---PNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDC 438

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  D  L+VL E+      P    Y  ++      G+VD  +K    M    CKPN
Sbjct: 439 LCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSM---TCKPN 495

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN + M LC V   ++A  +I  +  ++    +  +  +I+SLC+KG    A  +  
Sbjct: 496 TVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFE 555

Query: 437 EMTKYGFTP--------------------------------DSYTYSSLIRGLCMEGLIE 464
           +M  YG TP                                D+  YSS ++GLC   L E
Sbjct: 556 KMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNMSCKADTICYSSALKGLCRAELWE 615

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A E+ V M   D  PD   F+ ++  LC+    + + EV  +M++    PN   Y+ L+
Sbjct: 616 DAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLI 675

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAV 554
            G +    LE + ++L+ +      S +A+
Sbjct: 676 NGFSEHGHLEDALKLLRSMPCEPDTSVTAL 705



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 198/400 (49%), Gaps = 10/400 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  DA   +  MV K   PD V    ++  LC    +  A++V++ M   G  PD  
Sbjct: 304 RAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNF 363

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+N   ++G V  A++L+  M       NTV Y S+++GLC  G      Q +  +
Sbjct: 364 TYSALINAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLKGLCRDGQWEDVGQLIGEM 420

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++    P+   +  +++   +   V   +++L ++   G  P++V Y  LL G  + GR 
Sbjct: 421 VRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRV 480

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +++++ F+ +  K   PN V+YN +L  LC    WE+A +L+ EM G +  P  +T++IL
Sbjct: 481 DDSLKLFKSMTCK---PNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSIL 537

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL   G  + A+ V ++M      P+   Y+ +   L  +G VD  +K L+ M    C
Sbjct: 538 ISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNM---SC 594

Query: 375 KPNEGTY-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           K +   Y + L  LC     ++A  +I  +  K     +  +  +IT+LC++G    A +
Sbjct: 595 KADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATE 654

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
           +   M KY  TP+   YSSLI G    G +E+AL++   M
Sbjct: 655 VSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRSM 694


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 241/479 (50%), Gaps = 2/479 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM  KG  PDV   T  +   C+ ++   A +++  M S G    A +Y  ++    ++ 
Sbjct: 136 RMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEEN 195

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +   A +L E+M   G   + + +N L+  LC  G++ +S + L++++++G+ PN FT +
Sbjct: 196 HRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVN 255

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             ++   +   ++ A++LLD +  +G  P++++YN L+ GLCK  +  EA  + R + ++
Sbjct: 256 IFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNE 314

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G+EP+  +YN ++   C  G  + A+++L +       P   TY  LI  L   G  D A
Sbjct: 315 GYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRA 374

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAM 386
           + V +E ++   +P+    N ++  L  +G +   +K +++M    C P+  TYN  +  
Sbjct: 375 INVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVING 434

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC +G V +A  ++     K +      +  +I   C+K K   A +++  M  +G +PD
Sbjct: 435 LCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPD 494

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+S++ GLC  G  E+ +  F +M E    P++  +N L    CK+R+ + +L + +
Sbjct: 495 VITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIE 554

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
            M  KG  P+   +  L++G     +L+ + ++ K +  +   S +     +M   F G
Sbjct: 555 EMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAG 613



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 224/489 (45%), Gaps = 44/489 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +++ +G  P++      +   C+   + +AI++++  V  G+ PD  +Y  L+  LCK
Sbjct: 239 LNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCK 297

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A   + KM + GY  +  TYNS++ G C LG +  + Q L     KG VP+  T
Sbjct: 298 NFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDEST 357

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+    ++  +  A+ + ++ + KG KPNLV  N L+ GL ++G   +A++   ++ 
Sbjct: 358 YCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMS 417

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P++ +YN+++  LC  G   +A+ L+ +       P + T+N LI       K D
Sbjct: 418 ENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLD 477

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           +A++++D M      P   +YN I+  LC  GK + V+     M  + C PN  TYN L 
Sbjct: 478 NAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILT 537

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK---TYQAF--------- 432
              C   KV+EA  +I+ + NK  +     +  ++   C  G     YQ F         
Sbjct: 538 ESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKF 597

Query: 433 ------------------------QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                                   +L  +M + GF+PDSYTY  +I G C  G I     
Sbjct: 598 SHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYS 657

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
             +V  E    P +  F  +L  LC  RR   ++ +  +M+ KG +P       +V  I 
Sbjct: 658 FLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPE------VVNTIF 711

Query: 529 HQDELELSA 537
             D+ E++A
Sbjct: 712 EADKKEVAA 720



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 218/471 (46%), Gaps = 72/471 (15%)

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           +KG +  A+ + E+M+ +    +  +YN+++  L      +Q+ +   R+  KG+VP+ +
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T++  +++  +    HAA +LL+++ ++G + + V+Y  ++ G  +E    EA   F ++
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G  P+++++N L+ +LC +G  +E+  LL ++     SP + T NI I         
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + A+++LD + +G   P   +YN +I  LC   KV      L +M +   +P+  TYN +
Sbjct: 268 NEAIRLLDGVGRG-LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK---------------- 427
               C +G +Q A  I++    K     +  Y  +I  LC+ G                 
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 428 -------------------TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE--- 465
                                QA +L+ EM++ G +PD +TY+ +I GLC  G + +   
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 466 --------------------------------ALEIFVVMEEYDYKPDVDNFNALLLGLC 493
                                           A+EI   M  +   PDV  +N++L GLC
Sbjct: 447 LVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K+ + +  +  F++M+EKG +PN  TY IL E      ++E +  +++E+Q
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQ 557



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/343 (20%), Positives = 140/343 (40%), Gaps = 53/343 (15%)

Query: 256 EAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAE---------------- 298
           +A+  F  +  + GF+  +++Y  ++  L   G +E   E+LAE                
Sbjct: 22  KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIG 81

Query: 299 --------------------MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
                               MD  +  P++ +YN ++  L  +   D A KV   M    
Sbjct: 82  AMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKG 141

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-------- 390
             P   ++   +   C   +     + L+ M      P++G  +     C V        
Sbjct: 142 IVPDVYTFTIRMKSFCRTSRPHAARRLLNNM------PSQGCESSAVAYCTVIGGFYEEN 195

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
            +V+      + LG         F K +I +LCRKG   ++ +LL ++ K G +P+ +T 
Sbjct: 196 HRVEAHELFEEMLGLGICPDIMAFNK-LIHTLCRKGHVQESERLLNKVLKRGVSPNLFTV 254

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +  I+G C   ++ EA+ +   +      PDV  +N L+ GLCK+ +   +    + M+ 
Sbjct: 255 NIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVN 313

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +G  P+  TY  +++G      ++ + ++L++   +  V + +
Sbjct: 314 EGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDES 356


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 233/475 (49%), Gaps = 8/475 (1%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           N A    E+   KG + +    + LL  LCK  K++KA ++++    +G++ D   Y   
Sbjct: 333 NGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTF 392

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           VN  C+ G++  A+  +E+ME +G   N++T+NSL+   C +  ++++ +++ ++ +KG+
Sbjct: 393 VNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ L++   K        ++L+ +   G KPN+VSY  L+  LCK+G+  EA  
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEI 512

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
             RD+  +G  PN   YN+L+   CM G+ ++A     EM   + SPT+VTYN+LI  L 
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLC 572

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             GK   A   L ++      P   +YN +I+   + G V   +   + M +   KP   
Sbjct: 573 KKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR 632

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGN---KQNSSPQE-FYKYVITSLCRKGKTYQAFQLL 435
           TY+ L   C     +E   +++ L N   + N  P    Y  +I      G T +A+ L 
Sbjct: 633 TYHPLISGCS----KEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLH 688

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M   G  PD  TY+SLI G   EG +    ++   M+  +  P  D ++ L+ G C  
Sbjct: 689 QGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDL 748

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           +    +   ++ M+E   +PN +    L  G+  +  L+    +  E+ ++ +++
Sbjct: 749 KDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGIIN 803



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 222/480 (46%), Gaps = 37/480 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M  +G +P+V     L+  LC+  +++ A K+ + M +  ++    +Y  L++  CK
Sbjct: 199 LDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCK 258

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A ++ E+M++     N +T+NSL+ GLC +  + ++   L  +   G +P+ +T
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYT 318

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA-------- 257
           YS L +   +    + AM+L +    KG + N  + ++LL GLCK+G+ E+A        
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT 378

Query: 258 ---------------------------IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
                                      I     + S G  PN +++N L+   C     +
Sbjct: 379 ENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMD 438

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +A E + +M     +P++ TYN LI         D   ++L++M +   +P+  SY  +I
Sbjct: 439 KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLI 498

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
             LC +GK+      L  M  R   PN   YN L    C VGKV++A      +   + S
Sbjct: 499 NCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEIS 558

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  +I  LC+KGK  +A   L ++T  G +PD  TY+SLI G    G + + L +
Sbjct: 559 PTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGL 618

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           +  M+    KP V  ++ L+ G C     +L  +++  M++   +P+   Y  ++   A 
Sbjct: 619 YETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAE 677



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 215/456 (47%), Gaps = 10/456 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ D F+++E   + G + D       +    K   +K  ++ ++ M   G+ P+   Y 
Sbjct: 159 KVVDLFMEIE---NSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYN 215

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC++  +  A ++ ++M +     + VTYN+L+ G C +G L+ + +  +R+ +K
Sbjct: 216 VLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEK 275

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + PN  T++ LL    K R +  A  LL ++   G  P+  +Y++L  GL +      A
Sbjct: 276 SVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGA 335

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  +     KG   N  + +ILL  LC +G+ E+A E+L +          V YN  +  
Sbjct: 336 MELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNG 395

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  + A+  ++ M     RP++ ++N +I + C   ++D   + + +M  +   P+
Sbjct: 396 YCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPS 455

Query: 378 EGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             TYN    G   LC   +  +    ++ +G K N      Y  +I  LC+ GK  +A  
Sbjct: 456 VETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVS---YGSLINCLCKDGKILEAEI 512

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L +M   G  P++  Y+ LI G CM G +++AL  F  M   +  P +  +N L+ GLC
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLC 572

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           K  +   + +    +   G  P+  TY  L+ G A+
Sbjct: 573 KKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYAN 608



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 7/292 (2%)

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            + F   +  +G  PNV  YN+L+  LC E R  +A ++  EM   +   +IVTYN LI 
Sbjct: 195 GMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLID 254

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G+ D A K+ + M +    P+  ++N +++ LC   K+      L +M      P
Sbjct: 255 GYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMP 314

Query: 377 NEGTYNGL---AMLCGVGK-VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           +  TY+ L    + C  G    E +      G + N+        ++  LC++GK  +A 
Sbjct: 315 DGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSI---LLNGLCKQGKVEKAE 371

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++L + T+ G   D   Y++ + G C  G + +A+     ME +  +P+   FN+L+   
Sbjct: 372 EILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKF 431

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           C  +  D + E  + M EKG  P+  TY  L++G       +   ++L++++
Sbjct: 432 CDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME 483



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/119 (21%), Positives = 57/119 (47%)

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +   L  E+   GF  D++ Y+  I+       ++  +E    M +   +P+V  +N L+
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            GLC+ +R   + ++F  M     + +  TY  L++G     EL+ + ++ + ++ + V
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV 277


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 218/453 (48%), Gaps = 39/453 (8%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            F   +R    G+K   +    L+  L K N+      V + M+   I P+  ++  ++N
Sbjct: 172 GFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVIN 231

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN---LNQSLQFLDRLIQKG 198
            LCK G +  A  ++E M+ YG   N V+YN+L+ G C LG    + ++   L  +++  
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND 291

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + PN  T++ L++  +K+  +  +MK+  +++ +  KPN++SYN L+ GLC  G+  EAI
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                + S G +PN+++YN L+   C     +EA ++   + G    PT   YN+LI + 
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK D    + +EM +    P   +YN +IA LC  G ++   K  DQ+         
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL--------- 462

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            T  GL  L     + E +                         CRKG++ +A  LL EM
Sbjct: 463 -TSKGLPDLVTFHILMEGY-------------------------CRKGESRKAAMLLKEM 496

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGLCKSRR 497
           +K G  P   TY+ +++G C EG ++ A  +   ME E   + +V ++N LL G  +  +
Sbjct: 497 SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            + +  +   M+EKG +PN  TY I+ E +  Q
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQ 589



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 188/401 (46%), Gaps = 14/401 (3%)

Query: 167 NTVTYNSLVRGLCMLGNLNQS-----LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           + V  NS++  + +L   N S      +   R    G   +A +   L+ A  KE     
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
              +  ++I +  +PN+ ++NV++  LCK G+  +A     D+   G  PNVVSYN L+ 
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266

Query: 282 SLCM---EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
             C     G+  +A+ +L EM   D SP + T+NILI           ++KV  EM+   
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
            +P+  SYN +I  LC+ GK+   +   D+M     +PN  TYN L    C    ++EA 
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +  S+  +        Y  +I + C+ GK    F L  EM + G  PD  TY+ LI GL
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G IE A ++F  +      PD+  F+ L+ G C+   +  +  + + M + G  P  
Sbjct: 447 CRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH 505

Query: 518 TTYTILVEGIAHQDELE----LSAEVLKELQLRQVVSESAV 554
            TY I+++G   +  L+    +  ++ KE +LR  V+   V
Sbjct: 506 LTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 179/384 (46%), Gaps = 6/384 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M+ +  +P+V     ++  LCK  KM KA  VME M   G  P+  SY  L++  CK 
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271

Query: 147 GNVG---YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           G  G    A  ++++M +     N  T+N L+ G     NL  S++    ++ + + PN 
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            +Y+ L+        +  A+ + D +++ G +PNL++YN L+ G CK    +EA+  F  
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  +G  P    YN+L+ + C  G+ ++   L  EM+     P + TYN LI  L  +G 
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN- 382
            + A K+ D++   +  P   +++ ++   C +G+       L +M     KP   TYN 
Sbjct: 452 IEAAKKLFDQLT-SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 383 GLAMLCGVGKVQEAFAI-IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +   C  G ++ A  +  Q    ++       Y  ++    +KGK   A  LL EM + 
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEE 465
           G  P+  TY  +   +  +G + +
Sbjct: 571 GLVPNRITYEIVKEEMVDQGFVPD 594



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 153/290 (52%), Gaps = 2/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  L  +    + M+ +  KP+V+   +L+  LC   K+ +AI + + MVS+G+ 
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L+N  CK   +  A+ +   ++  G    T  YN L+   C LG ++     
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + + ++G+VP+  TY+ L+    +   + AA KL D + +K G P+LV++++L+ G C+
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK-GLPDLVTFHILMEGYCR 482

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIV 309
           +G + +A    +++   G +P  ++YNI+++  C EG  + A  +  +M+   R    + 
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           +YN+L+   +  GK + A  +L+EM++    P+  +Y  +   +  +G V
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 2/305 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  A   L+ MV     P++     L+    K + +  ++KV + M+   + P+  SY 
Sbjct: 276 KMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYN 335

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LC  G +  A+ + +KM   G   N +TYN+L+ G C    L ++L     +  +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G VP    Y+ L++A  K   +     L +++  +G  P++ +YN L+ GLC+ G  E A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F  L SKG  P++V+++IL+   C +G   +A  LL EM      P  +TYNI++  
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514

Query: 318 LAYHGKTDHALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
               G    A  +  +M K  R R + ASYN ++     +GK++     L++M  +   P
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574

Query: 377 NEGTY 381
           N  TY
Sbjct: 575 NRITY 579


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 257/510 (50%), Gaps = 45/510 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ +AF    +MV +G   D+V  T ++  L KA K K+A ++ + ++   ++P+  
Sbjct: 318 KSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCV 377

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++  CK G+V +A  +++KME      N VT++S++ G    G LN++++ L ++
Sbjct: 378 TYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKM 437

Query: 195 IQKGLVPNAFTYSFLL---------EAA---YKER-----------------------GV 219
           +Q  ++PN F Y+ LL         EAA   YKE                        G+
Sbjct: 438 VQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGM 497

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A  L+ DI++KG   ++ +Y+ L+ G  KEG    A+   +++  K  + +VV+YN L
Sbjct: 498 KEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNAL 557

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
            + L   G++ E   + + M     +P  VTYN ++ +    GKT++AL +L+EM     
Sbjct: 558 TKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGV 616

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAI 399
            P+  +YN +I  LC  G ++ V+  L +M      P    +  L  L    + ++A AI
Sbjct: 617 MPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFL--LKAYSRSRKADAI 674

Query: 400 IQ---SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
           +Q    L +   +  Q  Y  +IT LCR G T +A  +L EM   G + D  TY++LIRG
Sbjct: 675 LQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRG 734

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            C    +E+A   +  M      P++  +NALL GL  +     + ++   M E+G +PN
Sbjct: 735 YCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPN 794

Query: 517 ETTYTILVEGIAH----QDELELSAEVLKE 542
            TTY ILV G       +D ++L  E++ +
Sbjct: 795 ATTYNILVSGHGRVGNKRDSIKLYCEMITK 824



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 218/475 (45%), Gaps = 35/475 (7%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P +    +LLY+   +  + +   +   MV  G++P+  S   LV+ LCK G++G A+  
Sbjct: 8   PSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLAL-- 65

Query: 156 VEKMEDYGYPTNTV----TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
                  GY  N+V    TYN++V G C  G  +Q    L  +++KG+  ++ T + L++
Sbjct: 66  -------GYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVK 118

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              +   V  A  ++ +++  G   + +  N L+ G C+ G    A+    D    G +P
Sbjct: 119 GYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKP 178

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDG---------------------GDRSPTIVT 310
           ++V+YN L+ + C  G   +A  ++ E+ G                      D  PT+VT
Sbjct: 179 DIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVT 238

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +  LI +   H   D    + ++M+     P   + + I+  LC  GK+      L +M+
Sbjct: 239 WTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMY 298

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +    PN  +Y   ++ L   G+V EAF     +  +  S        ++  L + GK+ 
Sbjct: 299 NMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSK 358

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A ++   + K    P+  TY++L+ G C  G +E A  +   ME+    P+V  F++++
Sbjct: 359 EAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSII 418

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            G  K    + ++EV + M++   MPN   Y IL++G     + E +A   KE++
Sbjct: 419 NGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMK 473



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 257/565 (45%), Gaps = 38/565 (6%)

Query: 29  IPNLHSFS-----------LNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDH 77
           +PN+ +FS           LNK    +    Q+ I P   VY         +   R   H
Sbjct: 408 LPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILL-----DGYFRTGQH 462

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +    F +   M S G + + +    LL +L ++  MK+A  +++ ++S GI  D  +Y+
Sbjct: 463 EAAAGFYK--EMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYS 520

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++   K+GN   A+ +V++M +     + V YN+L +GL  LG       F  R+I+ 
Sbjct: 521 SLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVF-SRMIEL 579

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+  TY+ ++   + +     A+ LL+++ + G  PN+V+YN+L+ GLCK G  E+ 
Sbjct: 580 GLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKV 639

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I    ++ + G+ P  + +  LL++     + +   ++  ++     +   + YN LI  
Sbjct: 640 ISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITV 699

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G T  A  VL EMV         +YN +I   C+   V+       QM      PN
Sbjct: 700 LCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPN 759

Query: 378 EGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             TYN  A+L G+   G +++A  ++  +  +        Y  +++   R G    + +L
Sbjct: 760 ITTYN--ALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKL 817

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM   GF P + TY+ LI+     G + +A E+   M      P+   ++ L+ G CK
Sbjct: 818 YCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK 877

Query: 495 -------SRRTDLSLE-----VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
                   R   LS +     + + M EKG +P+E+T   +    +   + + +  +LK 
Sbjct: 878 LSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKT 937

Query: 543 -LQLRQVVSESAVERLVMQYDFEGI 566
            + L +  +E A E+ + Q+ F  I
Sbjct: 938 VIGLYRSTAEEATEK-IAQFCFAQI 961



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 222/522 (42%), Gaps = 58/522 (11%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +  F  L  MV KG   D V    L+   C+   ++ A  +M  +V  G+  DA     L
Sbjct: 92  DQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTL 151

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ--- 196
           V+  C+ G V  A+ LVE     G   + VTYN+LV   C  G+L ++   ++ ++    
Sbjct: 152 VDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRR 211

Query: 197 ------------------KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
                             + L P   T++ L+ A  K RG+     L + +I  G  P++
Sbjct: 212 DDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDV 271

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+ + +L GLC+ G+  EA    R++ + G +PN VSY  ++ +L   GR  EA    ++
Sbjct: 272 VTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQ 331

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M     S  +V    ++  L   GK+  A ++   ++K    P+  +Y  ++   C  G 
Sbjct: 332 MVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGD 391

Query: 359 VDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQE---------------AFAI 399
           V+     L +M      PN  T+    NG A    + K  E                +AI
Sbjct: 392 VEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAI 451

Query: 400 IQS--LGNKQNSSPQEFYK---------------YVITSLCRKGKTYQAFQLLYEMTKYG 442
           +        Q+ +   FYK                ++ +L R G   +A  L+ ++   G
Sbjct: 452 LLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKG 511

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
              D + YSSL+ G   EG    AL +   M E D + DV  +NAL  GL +  + +   
Sbjct: 512 IYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK- 570

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            VF  MIE G  P+  TY  ++     Q + E + ++L E++
Sbjct: 571 SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMK 612



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 208/473 (43%), Gaps = 23/473 (4%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS------SGII---------------P 131
           G KPD+V    L+   CK   + KA  V+  ++       SG++               P
Sbjct: 175 GVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQP 234

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
              ++T L+   CK   +     L E+M   G   + VT +S++ GLC  G L ++   L
Sbjct: 235 TVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLL 294

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +   GL PN  +Y+ ++ A  K   V  A      ++ +G   +LV    ++ GL K 
Sbjct: 295 REMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKA 354

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+++EA   F+ +      PN V+Y  LL   C  G  E A  +L +M+     P +VT+
Sbjct: 355 GKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTF 414

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           + +I   A  G  + A++VL +MV+    P+   Y  ++      G+ +       +M  
Sbjct: 415 SSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKS 474

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              + N   ++ L   L   G ++EA ++I+ + +K        Y  ++    ++G    
Sbjct: 475 WGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESA 534

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  ++ EMT+     D   Y++L +GL   G  E    +F  M E    PD   +N+++ 
Sbjct: 535 ALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMN 593

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                 +T+ +L++   M   G MPN  TY IL+ G+     +E    VL E+
Sbjct: 594 TYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEM 646



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 90/404 (22%), Positives = 168/404 (41%), Gaps = 54/404 (13%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLL-DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           LVP+   ++ LL   +   G  + +K+L  +++  G  PN+ S N+L+  LCK G    A
Sbjct: 6   LVPSLPLWNDLL-YEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLA 64

Query: 258 IRFFR------------------------------DLPSKGFEPNVVSYNILLRSLCMEG 287
           + + R                              ++  KG   + V+ NIL++  C  G
Sbjct: 65  LGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIG 124

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
             + A  ++  + GG      +  N L+      G    AL ++++  K   +P   +YN
Sbjct: 125 LVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYN 184

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN--GLAMLCGVGKVQEAFAIIQSL-- 403
            ++   C  G +      ++++   R     G  N  G+    G+  +Q       +L  
Sbjct: 185 TLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIA 244

Query: 404 GNKQNSSPQEF---YKYVITS---------------LCRKGKTYQAFQLLYEMTKYGFTP 445
              ++    +F   Y+ +I S               LCR GK  +A  LL EM   G  P
Sbjct: 245 AYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDP 304

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  +Y+++I  L   G + EA      M       D+     ++ GL K+ ++  + E+F
Sbjct: 305 NHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMF 364

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           Q +++   +PN  TYT L++G     ++E +  VL++++   V+
Sbjct: 365 QTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVL 408


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 235/485 (48%), Gaps = 17/485 (3%)

Query: 90  VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           +S G +P++V    L+   C A +M+ A+KV E M  +   P+  +YT L++ LCK G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             AM L  +M + G   N VTY +L++G C  G+L  + + L  +   GLVPN +T+S L
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           ++A  K   V  A   L  ++ KG K N V Y  L+ GLCK G+ + A    + + S+GF
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIGSLAYHGKTDHA 327
            P+  SY+ L+  LC + +  +A  +L +M   G   SP  VTY I+I  L     ++  
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP--VTYTIIIDELVREVGSEGP 441

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            K+ D+M+     P   +Y   +   C EG+++     + QM  R   PN  TYN L   
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ------------L 434
              +G V +AF+  + +  K     ++ Y  ++  + +K  +  +              L
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVL 561

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L ++T+      +  YS  IR LC    +EEA   F+ M+  +  P  D + +++   C+
Sbjct: 562 LEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCR 621

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +    +L +   M + G +P+  +Y I++  +        + EV  +L L++   +  V
Sbjct: 622 LKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIV 681

Query: 555 ERLVM 559
            ++++
Sbjct: 682 WKILI 686



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 221/475 (46%), Gaps = 3/475 (0%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
            L  ++  G  PD    T+ +   C+A  +  A +V  +M   G +  A +YT L++ L 
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
             G V  AM +   M       +T  Y ++V GLC  G   ++   L+  +  G  PN  
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            Y+ L++       +  A+K+ + +      PN+ +Y  L+ GLCK G+ E A+  F  +
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G EPNVV+Y  L++  C EG  + A  LL  M+     P   T+++LI +L    K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + A   L  +VK   + +   Y  +I  LC  GK+D   + + +M      P+  +Y+ L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC   K+ +A  +++ +  K   +    Y  +I  L R+  +    ++  +M   G 
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD  TY+  +R  C EG +E+A  + V M +    P++  +N L+ G         +  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR--QVVSESAVER 556
            F++M+ KG  PNE +YT+L+  +  +   + S ++ K   ++  QV+ E   ER
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 202/429 (47%), Gaps = 1/429 (0%)

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           ME + S     +  +YT L+N  C  G++  A Q +  +   G   ++  Y S V G C 
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            G L  + +    +  +G +  AFTY+ LL        V  AM +   + A    P+   
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHV 179

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y  ++ GLC+ GRTEEA     +  S GFEPN+V YN L+   C  G  E A ++   MD
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G   SP + TY  LI  L   GK + A+ +   MV+    P+  +Y  +I   C+EG + 
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
              + L  M      PN+ T++ L   LC   KV+EA   + SL  K     +  Y  +I
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC+ GK   A +L+ +M   GF PD+++YSSLI GLC +  + +A  +   M E   +
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
                +  ++  L +   ++   ++F  MI  G  P+  TYT+ V     +  +E +  +
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 540 LKELQLRQV 548
           + ++  R V
Sbjct: 480 IVQMVDRGV 488



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 194/434 (44%), Gaps = 49/434 (11%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+ +A L L  +V KG K + V  T+L+  LCK  K+  A ++M+ M+S G +
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PDA SY+ L++ LC++  +  A  ++E M                               
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDM------------------------------- 413

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
               ++KG+  +  TY+ +++   +E G     K+ D +IA G  P++V+Y V +   C+
Sbjct: 414 ----MEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCE 469

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EGR E+A      +  +G  PN+V+YN L+R     G   +A      M G    P   +
Sbjct: 470 EGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529

Query: 311 YNILIGSLAYHGKTDHA-----------LKVLDEMVKGRFRPSAAS-YNPIIARLCSEGK 358
           Y +L+  +     +D++           L+VL E +  R  P AA  Y+  I  LC   +
Sbjct: 530 YTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDR 589

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV-QEAFAIIQSLGNKQNSSPQEFYKY 417
           ++        M +    P+E  Y  +   C   K+  +A  ++ S+         E Y+ 
Sbjct: 590 LEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRI 649

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I+SLC  G    A ++  ++       D   +  LI GL  +G + E   +  VM+E+ 
Sbjct: 650 IISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHG 709

Query: 478 YKPDVDNFNALLLG 491
           Y+P  +  NA++ G
Sbjct: 710 YQPS-NTINAMITG 722



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 12/253 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   + +MV +G  P++V    L+        + +A    E+MV  G  P+  SYT
Sbjct: 472 RMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531

Query: 138 YLVNCLCKKGNVGYAMQ------------LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
            L+  + KK +   ++             L+E + +   P     Y+  +R LC +  L 
Sbjct: 532 VLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLE 591

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           ++  F   +    L P+   Y+ +++   + + +  A+ LLD +   G  P+L SY +++
Sbjct: 592 EAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIII 651

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
           + LC+ G    A   F DL  K    + + + IL+  L  +G   E + LL+ M      
Sbjct: 652 SSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQ 711

Query: 306 PTIVTYNILIGSL 318
           P+     ++ G +
Sbjct: 712 PSNTINAMITGEI 724


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 234/489 (47%), Gaps = 13/489 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A    + +  +   PD +  + L+  L K +++  A+ +++ M  SG+ PD   Y  
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 139 LVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           L+    K G     M++ +K+ +D G   N  TYN ++ GLC  G   +  +  +R++  
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L P+  TY  L+    +   V  A ++  +II  G   +   YN L+ G C+ GR +EA
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL--LAEMDGGDRSPTIVTYNILI 315
            +F+      G   N+ +YNI+++ L   G  +EA EL  L E D     P  VT+  LI
Sbjct: 354 WKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVA-CIPDTVTFGTLI 411

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L  +G  + A  + +E      +    SY+ +I  LC+ G++   VK  ++M    CK
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN   YN L +  C V +  +A  I   + +   S     Y  +I  LC+  K  +A  +
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM + GFTPD  TY SLIRGL  +  I++AL I+  +     K DV   N L+ GLC 
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591

Query: 495 SRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           + + D +L VF  M EK    PN  TY  L++G+     ++      K   L   ++E  
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID------KAATLWTSITEDG 645

Query: 554 VERLVMQYD 562
           +E  ++ Y+
Sbjct: 646 LEPDIISYN 654



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 196/382 (51%), Gaps = 8/382 (2%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  TYN ++R LC  G+L++++   D L ++ + P+  TYS L+    K+  +  A+ LL
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLL 216

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCM 285
           D++   G +P++V YN LL G  K G  E+ +R +  L    G  PN+ +YN++L  LC 
Sbjct: 217 DEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            GR++E  E+   M   +  P ++TY ILI  L   G  D A +V  E++K      AA 
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQS 402
           YN ++   C  G+V    K  D       + N  TYN   M+ G+   G V EA  +   
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYN--IMIKGLFDSGMVDEAIELWDL 393

Query: 403 LGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           L       P    +  +I  LC+ G   +AF +  E    G   D ++YSS+I GLC  G
Sbjct: 394 LEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG 453

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            + +A++++  M++   KP+   +NAL+ G C+  RT  ++ ++  M + G  P   TY 
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513

Query: 522 ILVEGIAHQDELELSAEVLKEL 543
            L++G+   ++ + ++ V +E+
Sbjct: 514 TLIDGLCKAEKYQEASSVAREM 535



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 215/470 (45%), Gaps = 10/470 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG----IIPDASSY 136
           DAF  L  ++  G  P +     LL    +A +   A      +        I P+  +Y
Sbjct: 104 DAFRALPSIL--GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++  LC +G++  A+ L + +       + +TY++L+ GL     L+ +L  LD + +
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPR 221

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-GGKPNLVSYNVLLTGLCKEGRTE 255
            G+ P+   Y+ LL   +K       M++ D ++   G +PNL +YNV+L GLCK GR +
Sbjct: 222 SGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFK 281

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           E    +  + +   +P+V++Y IL+  LC  G  + A  + +E+           YN L+
Sbjct: 282 EVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLV 341

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-RC 374
                 G+   A K  D       R +  +YN +I  L   G VD  ++  D +     C
Sbjct: 342 KGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVAC 400

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  T+  L   LC  G   +AF I +             Y  +I  LC  G+   A +
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  +M K G  P+S+ Y++LI G C      +A+ I+  M +    P V  +N L+ GLC
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K+ +   +  V + M+E G  P+ TTY  L+ G+    +++ +  + K++
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 202/412 (49%), Gaps = 6/412 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ERMV+   +PDV+    L++ LC++  +  A +V   ++ +G++ DA+ Y  LV   C+ 
Sbjct: 288 ERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQA 347

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL--VPNAF 204
           G V  A +  +     G   N  TYN +++GL   G ++++++  D L++K +  +P+  
Sbjct: 348 GRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTV 405

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T+  L+    +    + A  + ++    G + ++ SY+ ++ GLC  GR  +A++ +  +
Sbjct: 406 TFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G +PN   YN L+   C   R  +A  + ++M     SPT++TYN LI  L    K 
Sbjct: 466 DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKY 525

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A  V  EMV+  F P   +Y  +I  L S+ K+D  +    Q+ ++  K +   +N L
Sbjct: 526 QEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL 585

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
              LC  GKV EA  +   +  K+N  P    Y  ++  L   G   +A  L   +T+ G
Sbjct: 586 IHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG 645

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             PD  +Y++ I+GLC    I E +++   +      P V  +N L+  + K
Sbjct: 646 LEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 138/281 (49%), Gaps = 1/281 (0%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           N AF   E     G + DV   ++++  LC   ++  A+KV E M   G  P++  Y  L
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  C+      A+++  KM D G     +TYN+L+ GLC      ++      +++ G 
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY  L+   + ++ +  A+ +   I+ KG K +++ +N+L+ GLC  G+ +EA+ 
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH 600

Query: 260 FFRDLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F D+   K   PN+V+YN L+  L   G  ++A  L   +      P I++YN  I  L
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
               +    +++LDE++     P+  ++N ++  +   G +
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 171/362 (47%), Gaps = 21/362 (5%)

Query: 179 CMLGNLNQSLQFLDRLIQKG--LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           C+L NL   L+   R  +    +V +AF+ + + +AA        A + L  I+  G  P
Sbjct: 67  CLL-NLLPRLRHRPRFSESAALVVLSAFSRAIMPDAALD------AFRALPSIL--GCNP 117

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF----EPNVVSYNILLRSLCMEGRWEEA 292
            + S+N LL    +  R  +A  FF  L    F     PN+ +YNI+LRSLC  G  + A
Sbjct: 118 GIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRA 177

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             L   +     +P  +TY+ L+  LA   + DHAL +LDEM +   +P    YN ++  
Sbjct: 178 VTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGG 237

Query: 353 LCSEGKVDLVVKCLDQMFHRR-CKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSS 410
               G+ + V++  D++      +PN  TYN  L  LC  G+ +E   + + +       
Sbjct: 238 CFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP 297

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I  LCR G    A ++  E+ K G   D+  Y+SL++G C  G ++EA + F
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-F 356

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK--GQMPNETTYTILVEGIA 528
                +    ++  +N ++ GL  S   D ++E++ ++ EK    +P+  T+  L+ G+ 
Sbjct: 357 WDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL-EKDVACIPDTVTFGTLIHGLC 415

Query: 529 HQ 530
             
Sbjct: 416 QN 417



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 1/246 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA    E+M   G KP+      L+   C+  +   A+++   M  +G  P   +Y 
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK      A  +  +M + G+  +  TY SL+RGL     ++ +L    +++ K
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEE 256
           GL  +   ++ L+        V  A+ +  D+  K    PNLV+YN L+ GL + G  ++
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   +  +   G EP+++SYN  ++ LC   R  E  +LL E+      PT++T+NIL+ 
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVR 693

Query: 317 SLAYHG 322
           ++  +G
Sbjct: 694 AVIKYG 699



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 1/212 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++ +DA     +M   G  P V+    L+  LCKA K ++A  V   MV +G  PD ++Y
Sbjct: 488 YRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTY 547

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ-FLDRLI 195
             L+  L     +  A+ + +++   G   + + +N L+ GLC  G ++++L  F D   
Sbjct: 548 GSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKE 607

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K   PN  TY+ L++  Y+   +  A  L   I   G +P+++SYN  + GLC   R  
Sbjct: 608 KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIH 667

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           E I+   ++ S+G  P V+++NIL+R++   G
Sbjct: 668 EGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 78/141 (55%), Gaps = 1/141 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDAS 134
           D K++DA    ++++ KG K DV+    L++ LC A K+ +A+ V  +M       P+  
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L + G +  A  L   + + G   + ++YN+ ++GLC    +++ +Q LD +
Sbjct: 617 TYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEV 676

Query: 195 IQKGLVPNAFTYSFLLEAAYK 215
           + +G++P   T++ L+ A  K
Sbjct: 677 LSRGIIPTVITWNILVRAVIK 697


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 227/486 (46%), Gaps = 43/486 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    + M S    PDVV    L++  C   +++ A+K+++ MV+ G+ P+A+ YT
Sbjct: 274 RVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYT 330

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V  LC KG +  A+++VE M       +   Y +++ G C  G+L  + ++ D + +K
Sbjct: 331 SVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRK 390

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +  TY+ ++    +   +  A KLL ++ A+    + V+Y VL+ G CK G+  EA
Sbjct: 391 GLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEA 450

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +    +  +G  PNVV+Y  L   LC +G  + ANELL EM          TYN LI  
Sbjct: 451 FQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 510

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A++ + +M     +P   +Y  +I  LC  G +D     L +M  +  KP 
Sbjct: 511 LCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  +   C  G+     +LL  
Sbjct: 571 IVTYNVL----------------------------------MNGFCMSGRVEGGKKLLDW 596

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M +    P++ TY+SL++  C+E  ++   EI+  M   D  P+ + +N L+ G CK+R 
Sbjct: 597 MLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARN 656

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +L     MI+KG     T+Y+ L+  +  + +   + E+  +++   + +ES V   
Sbjct: 657 MKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDV--- 713

Query: 558 VMQYDF 563
              YDF
Sbjct: 714 ---YDF 716



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 209/419 (49%), Gaps = 11/419 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A   L+ MV+ G +P+    T+++  LC    +  A++V+E MV   +I D + YT
Sbjct: 306 ELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYT 365

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  C KG++  A +  ++M+  G  T+ VTY +++ GLC    L ++ + L  +  +
Sbjct: 366 TVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWAR 425

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L  +  TY+ L++   K   +  A ++ + ++ +G  PN+V+Y  L  GLCK+G  + A
Sbjct: 426 RLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAA 485

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ +KG E N  +YN L+  LC  G  E+A   +A+MD     P + TY  LI +
Sbjct: 486 NELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDA 545

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  D A  +L EM+    +P+  +YN ++   C  G+V+   K LD M  +   PN
Sbjct: 546 LCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPN 605

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L    C    ++    I + + ++     +  Y  +I   C+     +A     
Sbjct: 606 AATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHD 665

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE---------YDYKPDVDNFN 486
           EM + GF   + +YS+LIR L  +    EA E+F  M +         YD+  D+ NFN
Sbjct: 666 EMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDL-NFN 723



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 201/435 (46%), Gaps = 20/435 (4%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D +S+ +L+ CL        +  L+ ++  YG   +    N+++  L     L+++++  
Sbjct: 203 DPASFDFLLLCL-------PSAPLLRRLRQYGISPSPEACNAVLSRL----PLDEAIELF 251

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             L  K    N  +Y+ LL+A      V  A +L D++      P++V+Y +L+ G C  
Sbjct: 252 QELPHK----NVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCAL 304

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  E A++   ++ + G EPN   Y  ++  LC +G   +A  ++ +M           Y
Sbjct: 305 GELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALY 364

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             ++      G    A +  DEM +        +Y  +I  LC   +++   K L +M+ 
Sbjct: 365 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWA 424

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           RR   +E TY  L    C  GK+ EAF +  ++  +  +     Y  +   LC++G    
Sbjct: 425 RRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQA 484

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +LL+EM+  G   ++ TY+SLI GLC  G +E+A+     M+    KPDV  +  L+ 
Sbjct: 485 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLID 544

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
            LCKS   D +  + Q M++KG  P   TY +L+ G      +E   ++L  +  + +  
Sbjct: 545 ALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHP 604

Query: 551 ESAV-ERLVMQYDFE 564
            +A    L+ QY  E
Sbjct: 605 NAATYNSLMKQYCIE 619


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 227/469 (48%), Gaps = 34/469 (7%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            +L++A   L  M  +G +P VV  ++L+    K ++ ++++ + + MV  G + D S+Y+
Sbjct: 578  RLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYS 637

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             ++NCLCK  +V  A+ +  +M++ G       Y +L+  L     ++ +LQ  + L + 
Sbjct: 638  LVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES 697

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             LVP+ F Y+ ++    K   V  A KL+D +  +   P+L +Y  LL GL K GR EEA
Sbjct: 698  SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               F  +  +G EP+VV+Y  L+  L   G+   A  +   M      P +VTY+ LI S
Sbjct: 758  FNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDS 817

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            L   G+ + A    +  +     P+   Y+ +I     +G VD  ++  ++M  R+C PN
Sbjct: 818  LGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877

Query: 378  EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
              TYN L                                  ++ L + G+   A +LL E
Sbjct: 878  IVTYNNL----------------------------------LSGLAKAGRLNVAEKLLEE 903

Query: 438  MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
            M K G  PD  TY+ LI G+   G+++EA   F  M+E    PDV  F +L+  L K  +
Sbjct: 904  MEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDK 963

Query: 498  TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
               + E+F  M E+G  P+  TY +L++ +    ++  +A +  E++++
Sbjct: 964  LLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVK 1012



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/546 (24%), Positives = 250/546 (45%), Gaps = 50/546 (9%)

Query: 38  NKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPD 97
           ++G +  L +  + IS    V  K  R+P              +A+     +  +G  PD
Sbjct: 420 DRGLVPNLRTYNIMIS----VLGKAGRQP--------------EAWQLFHDLKEQGAVPD 461

Query: 98  VVQATNLLYDLCKANKMKKAIKVMEMMVSSG---IIPDAS-------------------- 134
           V     L+  L K  +M K + +++ MV  G   II   S                    
Sbjct: 462 VFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSL 521

Query: 135 --------SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
                   +Y  L++     G+V  A++L+E M+ +      VTY +LV GL   G L++
Sbjct: 522 GFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDE 581

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           ++  L  + ++G  P+  TYS L+ + YK      ++ L D+++ KG   ++ +Y++++ 
Sbjct: 582 AVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVIN 641

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            LCK    ++A+  F  +  +G EP + +Y  LL SL  + + + A ++  E+      P
Sbjct: 642 CLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVP 701

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
               YNI++  L    + D A K++D M      P   +Y  ++  L   G+++      
Sbjct: 702 DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMF 761

Query: 367 DQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            +M     +P+   Y  L  + G  GK+  A  I +++  K+       Y  +I SL ++
Sbjct: 762 TKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKE 821

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G+  +A+         G TP+   YSSLI     +G+++ ALE+F  M+     P++  +
Sbjct: 822 GRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTY 881

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           N LL GL K+ R +++ ++ + M + G +P+  TY IL++G+     ++ +    K ++ 
Sbjct: 882 NNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKE 941

Query: 546 RQVVSE 551
           + +V +
Sbjct: 942 KGIVPD 947



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 236/510 (46%), Gaps = 32/510 (6%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           +R  +L+ A   ++ M+  G  P V   T L+  L K+  + +A K    M +    P+ 
Sbjct: 298 NRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNV 357

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT LVN L K G +  A ++  +M++     + + YN+L+ GL   G  + +      
Sbjct: 358 VTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKE 417

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  +GLVPN  TY+ ++    K      A +L  D+  +G  P++ +YN L+  L K G+
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQ 477

Query: 254 TEEAIRFFRDLPSKGFE------------------------PNV-------VSYNILLRS 282
            ++ +   +++  KG E                        P++       ++YN L+ +
Sbjct: 478 MDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA 537

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
               G  +EA +LL  M   +  PT+VTY  L+  L   G+ D A+ +L EM K    PS
Sbjct: 538 FIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS 597

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQ 401
             +Y+ ++A      + +  +   D+M  + C  +  TY+  +  LC    V +A  +  
Sbjct: 598 VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFG 657

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  +        YK +++SL +  K   A Q+  E+ +    PD++ Y+ ++ GL    
Sbjct: 658 RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++EA ++   M+  +  PD+  + +LL GL KS R + +  +F  M E+G  P+   YT
Sbjct: 718 RVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYT 777

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            L++ +    +L  +  + + +  ++ V +
Sbjct: 778 SLMDVLGKGGKLSHALIIFRAMAKKRCVPD 807



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 140/594 (23%), Positives = 253/594 (42%), Gaps = 78/594 (13%)

Query: 35  FSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDT--------RHRDHKLNDAFLQ- 85
           F LN G +  +   Q  +      +T   ++ G ++          R    +  DA +Q 
Sbjct: 145 FKLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQI 204

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M  +GH+  +   T+LL      N +  A+++   M S G  P  + Y +++  L K
Sbjct: 205 LTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVK 264

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A+ +  K+  +    +  T+   V      G L+ + + +  +I+ G+ P   T
Sbjct: 265 GGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHT 324

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR------ 259
           ++ L++A  K   +  A K  + +      PN+V+Y  L+ GL K GR EEA        
Sbjct: 325 FTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMK 384

Query: 260 -----------------------------FFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
                                         F+++  +G  PN+ +YNI++  L   GR  
Sbjct: 385 ENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQP 444

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV--------------- 335
           EA +L  ++      P + TYN LI  L   G+ D  L ++ EMV               
Sbjct: 445 EAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAG 504

Query: 336 -----KGRFR----PSAA-------SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                +G  R    PS         +YN +++     G VD  VK L+ M    C P   
Sbjct: 505 HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV 564

Query: 380 TYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           TY  L    G  G++ EA ++++ +  KQ   P    Y  ++ S  ++ +  ++  L  E
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREM-EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDE 623

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + G   D  TYS +I  LC    +++AL++F  M+E   +P + N+  LL  L K  +
Sbjct: 624 MVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            D +L++F  + E   +P+   Y I+V G+   + ++ + +++  ++ + ++ +
Sbjct: 684 IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPD 737



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 231/493 (46%), Gaps = 36/493 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M  +G  P++     ++  L KA +  +A ++   +   G +PD  +Y  L++ L K
Sbjct: 415 FKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGK 474

Query: 146 KGNVGYAMQLVEKMEDYG-------------------------YPT------NTVTYNSL 174
            G +   + ++++M + G                         YP+        +TYN+L
Sbjct: 475 GGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTL 534

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +      G+++++++ L+ + +   +P   TY+ L++   K   +  A+ LL ++  +G 
Sbjct: 535 MSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGC 594

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P++V+Y+ L+    K  + EE++  F ++  KG   +V +Y++++  LC     ++A +
Sbjct: 595 EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALD 654

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           +   M      P +  Y  L+ SL    K D AL++ +E+ +    P    YN ++  L 
Sbjct: 655 VFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLV 714

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSP 411
              +VD   K +D M ++   P+  TY  L  L G+GK   ++EAF +   +  + +   
Sbjct: 715 KSNRVDEACKLVDSMKNQNILPDLFTYTSL--LDGLGKSGRLEEAFNMFTKMTEEGHEPD 772

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  ++  L + GK   A  +   M K    PD  TYSSLI  L  EG +EEA   F 
Sbjct: 773 VVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFE 832

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
                   P+V  +++L+    K    D +LE+F+ M  +   PN  TY  L+ G+A   
Sbjct: 833 NSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAG 892

Query: 532 ELELSAEVLKELQ 544
            L ++ ++L+E++
Sbjct: 893 RLNVAEKLLEEME 905



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 162/333 (48%), Gaps = 7/333 (2%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            +D K++ A      +      PD      ++  L K+N++ +A K+++ M +  I+PD  
Sbjct: 680  KDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +YT L++ L K G +  A  +  KM + G+  + V Y SL+  L   G L+ +L     +
Sbjct: 740  TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM 799

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +K  VP+  TYS L+++  KE  V  A    ++ I+KG  PN+  Y+ L+    K+G  
Sbjct: 800  AKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMV 859

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            + A+  F ++  +   PN+V+YN LL  L   GR   A +LL EM+     P +VTYNIL
Sbjct: 860  DRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNIL 919

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD-LVVKC--LDQMFH 371
            I  +   G  D A      M +    P   ++  +I  L   GKVD L+  C   D M  
Sbjct: 920  IDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL---GKVDKLLEACELFDSMEE 976

Query: 372  RRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSL 403
                P+  TYN L  + G  GKV EA  I   +
Sbjct: 977  EGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEM 1009



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 154/303 (50%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            + +++++A   ++ M ++   PD+   T+LL  L K+ ++++A  +   M   G  PD  
Sbjct: 715  KSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVV 774

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +YT L++ L K G + +A+ +   M       + VTY+SL+  L   G + ++  F +  
Sbjct: 775  AYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENS 834

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            I KG  PN   YS L+++  K+  V  A++L +++  +   PN+V+YN LL+GL K GR 
Sbjct: 835  ISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRL 894

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
              A +   ++   G  P++V+YNIL+  +   G  +EA      M      P ++T+  L
Sbjct: 895  NVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSL 954

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
            I SL    K   A ++ D M +  + PS  +YN +I  L   GKV        +M  + C
Sbjct: 955  IESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGC 1014

Query: 375  KPN 377
             P+
Sbjct: 1015 MPD 1017



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 131/259 (50%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  KL+ A +    M  K   PDVV  ++L+  L K  ++++A    E  +S G  
Sbjct: 781  DVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCT 840

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+   Y+ L++   KKG V  A++L E+M+    P N VTYN+L+ GL   G LN + + 
Sbjct: 841  PNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKL 900

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            L+ + + G VP+  TY+ L++   K   V  A      +  KG  P+++++  L+  L K
Sbjct: 901  LEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGK 960

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              +  EA   F  +  +G+ P+VV+YN+L+  L   G+  EA  +  EM      P  +T
Sbjct: 961  VDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020

Query: 311  YNILIGSLAYHGKTDHALK 329
              I+   L+   +  HAL+
Sbjct: 1021 IGIMKRILSVREQQFHALE 1039


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 221/457 (48%), Gaps = 1/457 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           ++ +N AF     M  KG + + V  TNL++ LC+  ++ + I + + M      P   +
Sbjct: 17  NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT +V+ L + G    A+ L  +M + G   N  TY  ++  +C    L +  + LD ++
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +KGLVP+  TY+ L++   KE  V AA ++LD + +    PN  +YN L+ G C++    
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+     +      P+VV+YN L+   C  G  + A  LL  M+     P   TY++ I
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            +L   G+ + A  + + + +   + +   Y  +I   C  GK+D     LD+M    C 
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN  TYN L   LC   KVQEA  +++S+  K        Y  +I ++ ++G    A ++
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L +M   G+ PD Y Y++ I   C  G I+EA ++  +M E    PD   +  ++     
Sbjct: 377 LDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGG 436

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
               + + +V + M + G  P+  TY+ L++ +  ++
Sbjct: 437 LGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEE 473



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 224/474 (47%), Gaps = 30/474 (6%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A      M  +G +P++   T ++  +CK  K+++  ++++ MV  G++P   +Y  L+
Sbjct: 92  EAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALI 151

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +  CK+G V  A ++++ M       N  TYN L+ G C   N+++++  L ++++  L 
Sbjct: 152 DGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLT 211

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ L+    K   + +A +LL+ +   G  P+  +Y+V +  LCK+GR EEA   
Sbjct: 212 PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVL 271

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  L  KG + N V Y  L+   C  G+ ++AN LL  M   D  P   TYN LI  L  
Sbjct: 272 FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCK 331

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K   AL +++ M++   + +  +Y  +I  +  EG  D   + LDQM     +P+   
Sbjct: 332 ERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYI 391

Query: 381 YNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y   +   C  G ++EA  ++  +  +        Y  VI +    G    AF +L  M 
Sbjct: 392 YTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMF 451

Query: 440 KYGFTPDSYTYSSLIRGLCMEGL-----------------------------IEEALEIF 470
             G  P  +TYS LI+ L  E L                              E ALE+F
Sbjct: 452 DTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELF 511

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
             M E+   P+++ +  L++GLCK  R  ++ ++F  M E+G  P+E  Y  L+
Sbjct: 512 EKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 226/483 (46%), Gaps = 30/483 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++ A   L +M+     P VV   +L++  CK   +  A +++ +M  +G++PD  
Sbjct: 191 RKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQW 250

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+  ++ LCKKG +  A  L   +++ G   N V Y +L+ G C  G ++ +   LDR+
Sbjct: 251 TYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM 310

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +  +PN+ TY+ L++   KER V  A+ L++ +I KG K  + +Y +L+  + KEG  
Sbjct: 311 LTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDF 370

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A R    + S G++P+V  Y   + + C  G  +EA ++++ M      P  +TY ++
Sbjct: 371 DYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLV 430

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG----------------- 357
           I +    G  + A  VL  M      PS  +Y+ +I  L  E                  
Sbjct: 431 IDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNV 490

Query: 358 ------------KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
                       K +  ++  ++M    C PN  TY  L + LC VG++  A  +   + 
Sbjct: 491 FFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMN 550

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            +  S  +  Y  ++   C  G    A +L+  M ++G  P   + + L  GL  EG  E
Sbjct: 551 ERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKE 610

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A  +F  + +  Y  D   +  L+ GL K+  +D   E+  +M  +G   +  TY +L+
Sbjct: 611 KAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670

Query: 525 EGI 527
           EG+
Sbjct: 671 EGL 673



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 204/432 (47%), Gaps = 10/432 (2%)

Query: 139 LVNCLCKKGN---------VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +VN  CK GN         V  A  +   M   G   N V+Y +L+ GLC +G +++ + 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              ++ +    P   TY+ ++ A ++      A+ L  ++  +G +PN+ +Y V++  +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           KE + EE  R   ++  KG  P+V +YN L+   C EG  E A E+L  M     +P   
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TYN LI           A+ +L +M++ R  PS  +YN +I   C  G +D   + L+ M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 370 FHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                 P++ TY+  +  LC  G+++EA  +  SL  K   + +  Y  +I   C+ GK 
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A  LL  M      P+S TY++LI GLC E  ++EAL +   M +   K  V  +  L
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           ++ + K    D +  +   M+  G  P+   YT  +     +  ++ + +++  +  R V
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGV 420

Query: 549 VSESAVERLVMQ 560
           + ++    LV+ 
Sbjct: 421 MPDALTYTLVID 432


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 234/482 (48%), Gaps = 14/482 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+ +A    ERM      P V     ++  L +     +A KV   M   G+  D  
Sbjct: 88  RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  +   CK      A++L+  M + G  +N V Y ++V GL   G  + + +  D +
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + + L P+   ++ L+    K+  V  + +LL  ++ +G  PNL ++N+ + GLC+EG  
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 255 EEAIR---------FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
           + A+R         + R + + GFEP+ ++YN ++   C +G  ++AN +L +       
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P   TY  LI      G  D A+ V  + +    RPS   YN +I  L  +G +   ++ 
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 366 LDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSL 422
           +++M    C PN  TYN  +  LC +G V +A  ++     K    P + + Y  +I   
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK--GCPPDIFTYNTLIDGY 445

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++ K   A +++  M   G TPD  TY++L+ GLC  G  EE +EIF  MEE    P++
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNI 505

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N ++  LCK+++ + ++++   M  KG  P+  ++  L  G     +++ + ++ + 
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRR 565

Query: 543 LQ 544
           ++
Sbjct: 566 ME 567



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 215/453 (47%), Gaps = 34/453 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ ++ +A   L +MV+ G +PD +   +++   CK   ++ A +V++  V  G  
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N  CK G+   AM + +     G   + V YN+L++GL   G +  +LQ 
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++ + + G +PN +TY+ ++    K   V  A  L+DD IAKG  P++ +YN L+ G CK
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           + + + A      + S+G  P+V++YN LL  LC  G+ EE  E+   M+    +P I+T
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI++ SL    K + A+ +L EM     +P   S+  +    C  G +D       Q+F
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAY----QLF 563

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            R                    +++ + +  +            Y  ++++   +     
Sbjct: 564 RR--------------------MEKQYDVCHTTAT---------YNIIVSAFSEQLNMNM 594

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L   M   G  PD+YTY  +I G C  G I +  +  +   E  + P +  F  +L 
Sbjct: 595 AMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLN 654

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            LC   +   ++ +  +M++KG +P ET  TI 
Sbjct: 655 CLCVKDKVHEAVGIIHLMLQKGIVP-ETVNTIF 686



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 233/476 (48%), Gaps = 11/476 (2%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           N A     RM  +G + DV   T  +   CK  +   A++++  M   G   +A +Y  +
Sbjct: 128 NQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTV 187

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           V  L   G   +A +L ++M       + V +N LV  LC  G + +S + L +++++G+
Sbjct: 188 VAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGV 247

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMK---------LLDDIIAKGGKPNLVSYNVLLTGLCK 250
            PN FT++  ++   +E  +  A++          L  ++  G +P+ ++YN ++ G CK
Sbjct: 248 CPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCK 307

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +G  ++A R  +D   KGF+P+  +Y  L+   C +G  + A  +  +  G    P+IV 
Sbjct: 308 KGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVL 367

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  L+  G    AL++++EM +    P+  +YN +I  LC  G V      +D   
Sbjct: 368 YNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI 427

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            + C P+  TYN L    C   K+  A  ++  + ++  +     Y  ++  LC+ GK+ 
Sbjct: 428 AKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSE 487

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +  ++   M + G TP+  TY+ ++  LC    + EA+++   M+    KPDV +F  L 
Sbjct: 488 EVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLF 547

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNET-TYTILVEGIAHQDELELSAEVLKELQ 544
            G CK    D + ++F+ M ++  + + T TY I+V   + Q  + ++ ++   ++
Sbjct: 548 TGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMK 603



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 53/324 (16%)

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSL---AYHGKTDH---------------- 326
           +G+ +EA +    MD  +  P++ ++N ++  L    YH +                   
Sbjct: 89  KGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYT 148

Query: 327 ----------------ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
                           AL++L  M +     +A +Y  ++A L   G+ D   +  D+M 
Sbjct: 149 YTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEML 208

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKG-- 426
            R   P+   +N L  +LC  G V E+  ++  +  K+   P  F +   +  LCR+G  
Sbjct: 209 ARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV-LKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 427 -------KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
                  +  +A + L +M   GF PD  TY+S+I G C +G++++A  +        +K
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           PD   + +L+ G CK    D ++ VF+  + KG  P+   Y  L++G++ Q        +
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQ------GLI 381

Query: 540 LKELQLRQVVSESAVERLVMQYDF 563
           L  LQL   ++E+     +  Y+ 
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNL 405



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 97/255 (38%), Gaps = 45/255 (17%)

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN---EGTY-NGLAMLCGVGKVQ 394
           F+ +A++Y  I+ +L   G+ + + K L +M  R    N   EG Y   +      GKVQ
Sbjct: 36  FKHTASTYKCIVQKLGHHGEFEEMEKLLSEM--RENVNNALLEGAYIEAMKNYGRKGKVQ 93

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA    + +           +  ++  L   G   QA ++   M   G   D YTY+  I
Sbjct: 94  EAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRI 153

Query: 455 RGLCM-----------------------------------EGLIEEALEIFVVMEEYDYK 479
           +  C                                     G  + A E+F  M      
Sbjct: 154 KSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLC 213

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE- 538
           PDV  FN L+  LCK      S  +   ++++G  PN  T+ I V+G+  +  L+ +   
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRN 273

Query: 539 ---VLKELQLRQVVS 550
              V  E  LR++V+
Sbjct: 274 SRVVEAEEYLRKMVN 288


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 222/478 (46%), Gaps = 2/478 (0%)

Query: 79  LNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           L++A   L RM   G   P+      ++  L KA     A+K+ + M    ++P+  +Y 
Sbjct: 168 LDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYN 227

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++   KKG++    +L  +M  +G   N +TYN L+ GLC  G + ++   LD +  +
Sbjct: 228 TMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASR 287

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            +VP+ FTYS L +   +       + L ++ + KG K    + ++LL GLCK+G+  +A
Sbjct: 288 KMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKA 347

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + L + G     V YN L+   C  G  E A  +  +M      P  +TYN LI  
Sbjct: 348 EEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALING 407

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    +   A  ++ EM K    PS  ++N +I      G+++     L  M  +  KPN
Sbjct: 408 LGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPN 467

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             +Y  +    C  GK+ EA AI+  +  K      + Y  +I +    G T QAF L  
Sbjct: 468 VVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAE 527

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M   G  P   TY+ LI+GLC +  I EA E+   +  Y   PDV ++N L+   C   
Sbjct: 528 KMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRS 587

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            TD +LE+ + M + G  P+  TY +L   +     +     + +++  + VV  S +
Sbjct: 588 NTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGI 645



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 189/454 (41%), Gaps = 69/454 (15%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L   F    +M+  G KP+V+    LL  LC+A +M +   V++ M S  ++
Sbjct: 231 DGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMV 290

Query: 131 PDASSYTYL-----------------------------------VNCLCKKGNVGYAMQL 155
           PD  +Y+ L                                   +N LCK G +  A ++
Sbjct: 291 PDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEV 350

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           ++ + + G    TV YN+L+ G C +G+L  +     ++  + + P+  TY+ L+    K
Sbjct: 351 LQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK 410

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  A  L+ ++   G  P++ ++N L+    + G+ E+      D+  KG +PNVVS
Sbjct: 411 VERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVS 470

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  ++ + C  G+  EA  +L +M   D  P    YN +I +    G TD A  + ++M 
Sbjct: 471 YGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
                PS  +YN +I  LC + ++    + LD + +    P+  +YN L           
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTL----------- 579

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
                                  I++ C +  T +A +L  EM K G  P   TY  L  
Sbjct: 580 -----------------------ISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFS 616

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            L   G + E   ++  M + D  P    +N ++
Sbjct: 617 SLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMV 650



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 174/365 (47%), Gaps = 1/365 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E  V KG K      + LL  LCK  K+ KA +V++ +V+SG++     Y  L+N  C+
Sbjct: 316 FEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQ 375

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G++  A  + ++M+      + +TYN+L+ GL  +  + ++   +  + + G+ P+  T
Sbjct: 376 IGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVET 435

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L++A  +   +     +L D+  KG KPN+VSY  ++   CK G+  EA+    D+ 
Sbjct: 436 FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            K   P    YN ++ +    G  ++A  L  +M      P+IVTYN+LI  L    +  
Sbjct: 496 IKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQIS 555

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A ++LD +      P   SYN +I+  C     D  ++   +M+    KP+  TY  L 
Sbjct: 556 EAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLF 615

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
           + L G G+V E   + Q + +K        Y  ++ +  + G+  +   L  EM+  G  
Sbjct: 616 SSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA 675

Query: 445 PDSYT 449
              YT
Sbjct: 676 VGDYT 680



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 112/229 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L   F+ L  M  KG KP+VV   +++   CK  K+ +A+ +++ M    ++
Sbjct: 441 DAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVL 500

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P A  Y  +++   + G+   A  L EKM+  G P + VTYN L++GLC    ++++ + 
Sbjct: 501 PGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEEL 560

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD L   GL P+  +Y+ L+ A         A++L  ++   G KP+  +Y +L + L  
Sbjct: 561 LDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGG 620

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            GR  E    ++ +  K   P    YNI++ +    G   +   L  EM
Sbjct: 621 AGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEM 669



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/407 (21%), Positives = 161/407 (39%), Gaps = 73/407 (17%)

Query: 221 AAMKLL------------------------------------DDIIAKGGKPNLVSYNVL 244
            A++LL                                    + ++A   +P+  ++N  
Sbjct: 99  GALRLLSLLADARAPLPSLSSCNLLLESLLSLGRHADVRGAFELLVAARARPDTFTWNKA 158

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGF-EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           +      G  +EA+   R +   G   PN  SYN+++  L   G   +A +L  EM    
Sbjct: 159 VQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKA 218

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P  +TYN +I      G  +   ++  +M++   +P+  +YN +++ LC  G++    
Sbjct: 219 VVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETA 278

Query: 364 KCLDQMFHRRCKPNEGTYN-------------------------GLAM-----------L 387
             LD+M  R+  P+  TY+                         G+ +           L
Sbjct: 279 AVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGL 338

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK+ +A  ++Q+L N         Y  +I   C+ G    AF +  +M      PD 
Sbjct: 339 CKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDH 398

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY++LI GL     I EA ++ + ME+    P V+ FN L+    ++ + +    +   
Sbjct: 399 ITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSD 458

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           M EKG  PN  +Y  +V       ++  +  +L ++ ++ V+  + V
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQV 505


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 238/517 (46%), Gaps = 40/517 (7%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
             L  ++M+  G  PDV     +L  L   N + KA  V  MM   GI P   +Y  +++
Sbjct: 164 CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLD 223

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK+G V  A++L+ +M++ G   N VTYN LV GL   G L Q+   ++ ++  GL  
Sbjct: 224 SYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV 283

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +A+TY+ L+    ++     A  L+++++ +   P L +YN L+ GLCK  +       F
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRF 343

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            D+    F P++VS+N LL   C  G   EA  L  E+   D  PT++TYN LI  L   
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G  D AL++  EM      P   +Y  ++      G V +     ++M  +  KP+   Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463

Query: 382 NGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           N    + G  K+ +   AF++ + +           Y   + +LC++G   +A  LL  M
Sbjct: 464 N--TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-----------VV--------------- 472
              G  PD  TY+S+I G    G + +A E+F           VV               
Sbjct: 522 VSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQML 581

Query: 473 ---------MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
                    M E     +V  +NA++ GLC +RR D + + F  M EKG +PN+ +YTIL
Sbjct: 582 DLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +    +    E +  + +E+  R++  +S    + ++
Sbjct: 642 INESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLK 678



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SKG KPD       +    K      A  + E M+++G  PD  +Y   V+ LC++GN
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A  L+E M   G   + VTY S++ G    G+L ++ +  + ++ KG+ P+  TY+ 
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+ A   ++ +  A      ++ K    N+++YN ++ GLC   R +EA ++F ++  KG
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN  SY IL+   C  G WEEA  L  EM      P   T+++ + +L +     HA+
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL-HRDYQVHAV 689

Query: 329 KVLDEMVK 336
           + ++ +++
Sbjct: 690 QCVESLIQ 697



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 155/332 (46%), Gaps = 40/332 (12%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +++AFL  + +  +   P V+    L++ LC    +  A+++ + M   G+ PD  
Sbjct: 367 RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIF 426

Query: 135 SYTYLVNCLCKKG-------------------------------------NVGYAMQLVE 157
           +YT LVN   K G                                     +V ++MQ  E
Sbjct: 427 TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQ--E 484

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           +M   G+P + +TYN  V  LC  GN  ++   L+ ++  GL+P+  TY+ ++    K  
Sbjct: 485 EMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            +  A ++ +++++KG  P++V+Y VL+     +   + A  +F  +  K    NV++YN
Sbjct: 545 HLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYN 604

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            ++  LCM  R +EA +   EM+     P   +Y ILI      G  + AL++  EM+  
Sbjct: 605 AIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           + +P + +++  +  L  + +V   V+C++ +
Sbjct: 665 KIQPDSFTHSVFLKNLHRDYQVH-AVQCVESL 695


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 222/448 (49%), Gaps = 4/448 (0%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV--SSGIIPDASSYTYLVN 141
           L L RM   G +PD +    ++  LC+ ++ ++A+ ++  MV  S G  P+  +Y  +++
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            L ++G V  A  L  +M   G   + VTY S++  LC    ++++   L ++I  G  P
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ ++              +  ++ ++G  PN+V+ N  ++ LCK G+++EA  FF
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             + +KG +PN+V+Y++LL     EG + +   L   M+G         +NI+I +    
Sbjct: 356 DSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKR 415

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G  D  + +  +M +    P A +Y  +IA     G++   +   +QM     KP    Y
Sbjct: 416 GMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVY 475

Query: 382 NGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMT 439
           + L    C  G + +A  ++  + ++    P   F+  +I SLC++G+  +A  +   + 
Sbjct: 476 HSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVI 535

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  PD  T++SLI G  + G IE+A  +   M     +PDV ++N L+ G C++ R D
Sbjct: 536 HIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRID 595

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGI 527
             L +F  M+ KG  P   TY I++ G+
Sbjct: 596 DGLILFGEMLSKGVKPTTITYGIILHGL 623



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 216/472 (45%), Gaps = 4/472 (0%)

Query: 76  DHKLNDAFLQLERMVSK--GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           D +   A   L  MV K  G  P+VV    +++ L +  ++ KA  +   M+  G++PD 
Sbjct: 203 DSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDV 262

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT +++ LCK   +  A  ++ +M   G+  N VTYN ++ G  + G   ++      
Sbjct: 263 VTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFRE 322

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  +GL+PN  T +  + +  K      A +  D + AKG KPNLV+Y+VLL G   EG 
Sbjct: 323 MTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGC 382

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             + +  F  +   G   +   +NI++ +    G  +E   +  +M      P   TY I
Sbjct: 383 FVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGI 442

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I + +  G+   A+   ++M+    +P    Y+ +I   C  G +    + + +M  R 
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRG 502

Query: 374 C-KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
             +PN   +N +   LC  G+V EA  I   + +         +  +I      GK  +A
Sbjct: 503 IPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKA 562

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F +L  M   G  PD  +Y++LI G C  G I++ L +F  M     KP    +  +L G
Sbjct: 563 FGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHG 622

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L    RT  + ++   MIE G   + +T  I++ G+   +  + +  + K+L
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKL 674



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 224/497 (45%), Gaps = 37/497 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +++ A      M+ +G  PDVV  T+++  LCKA  M KA  V+  M+S+G  P+  
Sbjct: 239 REGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKV 298

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++     G       +  +M   G   N VT NS +  LC  G   ++ +F D +
Sbjct: 299 TYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 195 IQKGLVPNAFTYSFLLEA----------------------------------AYKERG-V 219
             KG  PN  TYS LL                                    AY +RG +
Sbjct: 359 AAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMM 418

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
              M +   +  +G  P+  +Y +++    + GR  +A+  F  + + G +P  + Y+ L
Sbjct: 419 DETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSL 478

Query: 280 LRSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++  CM G   +A EL++E M  G   P IV +N +I SL   G+   A  + D ++   
Sbjct: 479 IQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIG 538

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
            RP   ++N +I      GK++     LD M     +P+  +YN L    C  G++ +  
Sbjct: 539 ERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGL 598

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +   + +K        Y  ++  L   G+T  A ++ +EM + G T D  T   ++ GL
Sbjct: 599 ILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGL 658

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C     +EA+ +F  +   + K ++   N ++  + K R+ + + E+F  +   G +PN 
Sbjct: 659 CRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNA 718

Query: 518 TTYTILVEGIAHQDELE 534
           +TY ++++ +  +  +E
Sbjct: 719 STYGVMIKNLLKEGSVE 735



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 220/472 (46%), Gaps = 10/472 (2%)

Query: 82  AFLQLERMVSKGHKPDVVQAT----NLLYDLC-KANKMKKAIKVMEMMVSSGIIPDASSY 136
           A     R+  +  +P V   T    N+L D C +  +      +    + +G+  D    
Sbjct: 98  AVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVA 157

Query: 137 TYLVNCLCK-KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           + L+ CL   K +      L+ +M + G   +T++YN++V+ LC      ++L  L  ++
Sbjct: 158 SILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMV 217

Query: 196 QK--GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +K  G  PN  TY+ ++   ++E  V  A  L  +++ +G  P++V+Y  ++  LCK   
Sbjct: 218 KKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARA 277

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A    R + S GF+PN V+YN ++    + G+W+E   +  EM      P IVT N 
Sbjct: 278 MDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNS 337

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
            + SL  HGK+  A +  D M     +P+  +Y+ ++    +EG    ++   + M    
Sbjct: 338 YMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNG 397

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
              ++  +N +    G   + +   +I +   +Q   P    Y  VI +  R G+   A 
Sbjct: 398 IVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAM 457

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV-VMEEYDYKPDVDNFNALLLG 491
               +M   G  P+   Y SLI+G CM G + +A E+   +M     +P++  FN+++  
Sbjct: 458 DKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINS 517

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           LCK  R   + ++F  +I  G+ P+  T+  L++G     ++E +  VL  +
Sbjct: 518 LCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAM 569



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 227/518 (43%), Gaps = 56/518 (10%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
              M S+G  P++V   + +  LCK  K K+A +  + M + G  P+  +Y+ L++    
Sbjct: 320 FREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYAT 379

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G     + L   ME  G   +   +N ++      G +++++    ++ ++G++P+A T
Sbjct: 380 EGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACT 439

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  ++ A  +   +  AM   + +IA G KP  + Y+ L+ G C  G   +A     ++ 
Sbjct: 440 YGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMM 499

Query: 266 SKGF-EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
           S+G   PN+V +N ++ SLC EGR  EA+++   +      P ++T+N LI      GK 
Sbjct: 500 SRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKI 559

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY--- 381
           + A  VLD M+     P   SYN +I   C  G++D  +    +M  +  KP   TY   
Sbjct: 560 EKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGII 619

Query: 382 ----------------------NGLAM---LCGV--GKV------QEAFAIIQSLGNKQN 408
                                 +G  M    CG+  G +       EA A+ + LG    
Sbjct: 620 LHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNV 679

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                    +I ++ +  K  +A +L   ++  G  P++ TY  +I+ L  EG +EEA  
Sbjct: 680 KFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADN 739

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +F +ME+    P     N ++                ++++EKG++     Y   V+G  
Sbjct: 740 MFSLMEKSGCAPSSRLLNYII----------------RVLLEKGEIVKAGNYMFKVDG-- 781

Query: 529 HQDELELSA-EVLKELQLRQVVSESAVERLVMQYDFEG 565
            +  LE S   +L  L  R+      V+ L  +Y F G
Sbjct: 782 KRISLEASTVSLLMALFSREGKYWEDVKLLPAKYQFFG 819



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 178/371 (47%), Gaps = 4/371 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDA 133
           R  +L DA  +  +M++ G KP+ +   +L+   C    + KA +++  M+S GI  P+ 
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNI 508

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             +  ++N LCK+G V  A  + + +   G   + +T+NSL+ G  ++G + ++   LD 
Sbjct: 509 VFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDA 568

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +I  G+ P+  +Y+ L++   +   +   + L  ++++KG KP  ++Y ++L GL  +GR
Sbjct: 569 MISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR 628

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A +   ++   G   ++ +  I+L  LC     +EA  +  ++   +    I   N 
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINT 688

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I ++    K + A ++ D +      P+A++Y  +I  L  EG V+        M    
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+    N +  +L   G++ +A   +  +  K+ S        ++    R+GK ++  
Sbjct: 749 CAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDV 808

Query: 433 QLLYEMTKYGF 443
           +LL    KY F
Sbjct: 809 KLLP--AKYQF 817



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 136/328 (41%), Gaps = 37/328 (11%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA-NE 294
           P + +YN+L+   C+  R       F      G + +V+  +ILL+ L    R ++  N 
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK--GRFRPSAASYNPIIAR 352
           LL  M      P  ++YN ++ +L    ++  AL +L  MVK  G   P+  +YN +I  
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           L  EG+V        +M  +   P+  TY                               
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTS----------------------------- 267

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                +I +LC+     +A  +L +M   GF P+  TY+ +I G  + G  +E   +F  
Sbjct: 268 -----IIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFRE 322

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M      P++   N+ +  LCK  ++  + E F  M  KG  PN  TY++L+ G A +  
Sbjct: 323 MTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGC 382

Query: 533 LELSAEVLKELQLRQVVSESAVERLVMQ 560
                 +   ++   +V++  V  +V+ 
Sbjct: 383 FVDMLNLFNSMEGNGIVADQRVFNIVID 410



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 3/236 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ +++D  +    M+SKG KP  +    +L+ L    +   A K+   M+ SG  
Sbjct: 586 DGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTT 645

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D S+   ++  LC+      A+ + +K+       N    N+++  +  +    ++ + 
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKEL 705

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +   GLVPNA TY  +++   KE  V  A  +   +   G  P+    N ++  L +
Sbjct: 706 FDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLE 765

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR-WEEANELLAEMD--GGD 303
           +G   +A  +   +  K       + ++L+     EG+ WE+   L A+    GGD
Sbjct: 766 KGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLLPAKYQFFGGD 821


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 235/498 (47%), Gaps = 36/498 (7%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           K   P ++Q   +L  L KA     A+ + + M  +GI+ D  ++  L+NC  + G    
Sbjct: 64  KNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSL 123

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           +  +  K+   G+  N +T+N+L++GLC+ G+++Q+L F D+++ +G   +  +Y  L+ 
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K   + AA++LL  +  K  +PN V YN+++  +CK     +A   +  + +K   P
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT------- 324
           +  + N L+   C+ G+ +EA  LL +M   + +P + T++IL+ +    GK        
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303

Query: 325 ----------------------------DHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
                                       + A  + D M       +  SY  +I  LC  
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKI 363

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFY 415
             VD  V   ++M  R+  PN  TYN L    G +GK+     ++  + ++        Y
Sbjct: 364 KMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITY 423

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             ++ +LC+     +A  LL  +   G  PD YTY+ LI+GLC  G +E+A ++F  +  
Sbjct: 424 NSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLV 483

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
             Y  DV  +  ++ G C     D +L +   M + G +PN  TY I++  +  +DE ++
Sbjct: 484 KGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDM 543

Query: 536 SAEVLKELQLRQVVSESA 553
           + ++L+E+  R ++ E +
Sbjct: 544 AEKLLREMIARGLLDEKS 561



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 218/448 (48%), Gaps = 12/448 (2%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +F    +++ KG  P+ +    L+  LC    + +A+   + +V+ G   D  SY  L+N
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G +  A+QL+++++      N V YN ++  +C    +N +     +++ K + P
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 202 NAFT-----YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           + FT     Y F +    KE     A+ LL  +I +   P + ++++L+   CKEG+ +E
Sbjct: 244 DDFTCNSLIYGFCIMGQLKE-----AVGLLHKMILENINPRMYTFSILVDAFCKEGKVKE 298

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A         K    +VV+YN L+   C+     +A ++   M        + +Y  +I 
Sbjct: 299 AKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMIN 358

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L      D A+ + +EM   +  P+  +YN +I  L   GK+  V+K +D+M  R   P
Sbjct: 359 GLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPP 418

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TYN  L  LC    V +A A++ +L ++        Y  +I  LC+ GK   A ++ 
Sbjct: 419 NIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVF 478

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            ++   G+  D YTY+ +I+G C++GL + AL +   ME+    P+   +  ++L L + 
Sbjct: 479 EDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEK 538

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTIL 523
              D++ ++ + MI +G + +E +Y  L
Sbjct: 539 DENDMAEKLLREMIARGLL-DEKSYIYL 565



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 149/265 (56%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A + L   + K    DVV   +L+   C   ++ KA  + + M S G+I
Sbjct: 288 DAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVI 347

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  SYT ++N LCK   V  A+ L E+M       N VTYNSL+ GL  LG ++  L+ 
Sbjct: 348 ANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKL 407

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +  +G  PN  TY+ +L+A  K   V  A+ LL ++  +G +P++ +Y VL+ GLC+
Sbjct: 408 VDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQ 467

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+A + F DL  KG+  +V +Y ++++  C++G ++ A  LL++M+     P   T
Sbjct: 468 SGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKT 527

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV 335
           Y I+I SL    + D A K+L EM+
Sbjct: 528 YEIVILSLFEKDENDMAEKLLREMI 552



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 156/329 (47%), Gaps = 35/329 (10%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +NDAF    +MV+K   PD     +L+Y  C   ++K+A+ ++  M+   I P   +++ 
Sbjct: 226 VNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSI 285

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV+  CK+G V  A  ++          + VTYNSL+ G C++  +N++    D +  +G
Sbjct: 286 LVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRG 345

Query: 199 -----------------------------------LVPNAFTYSFLLEAAYKERGVHAAM 223
                                              ++PN  TY+ L++   K   +   +
Sbjct: 346 VIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVL 405

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           KL+D++  +G  PN+++YN +L  LCK    ++AI    +L  +G  P++ +Y +L++ L
Sbjct: 406 KLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGL 465

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G+ E+A ++  ++     +  + TY ++I      G  D AL +L +M      P+A
Sbjct: 466 CQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNA 525

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +Y  +I  L  + + D+  K L +M  R
Sbjct: 526 KTYEIVILSLFEKDENDMAEKLLREMIAR 554



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 181/385 (47%), Gaps = 5/385 (1%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           +P++   Y+ L        NL  S   L  L  K   P    ++ +L +  K +    A+
Sbjct: 33  FPSSISLYSQLHHHQDEENNLISSFNSL--LHHKNPTPPIIQFNKILSSLVKAKHHSTAL 90

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L   +   G   +  ++N+L+    + G    +   F  +  KGF+PN +++N L++ L
Sbjct: 91  SLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGL 150

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C++G   +A     ++         V+Y  LI  L   G+   AL++L  +     +P+A
Sbjct: 151 CLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNA 210

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
             YN II  +C    V+       QM  +R  P++ T N L    C +G+++EA  ++  
Sbjct: 211 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHK 270

Query: 403 LGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           +   +N +P+ + +  ++ + C++GK  +A  +L    K     D  TY+SL+ G C+  
Sbjct: 271 M-ILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVK 329

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I +A +IF  M       +V ++  ++ GLCK +  D ++ +F+ M  +  +PN  TY 
Sbjct: 330 EINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYN 389

Query: 522 ILVEGIAHQDELELSAEVLKELQLR 546
            L++G+    ++    +++ E+  R
Sbjct: 390 SLIDGLGKLGKISCVLKLVDEMHDR 414



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 4/149 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H ++ A   L  +  +G +PD+   T L+  LC++ K++ A KV E ++  G  
Sbjct: 428 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYN 487

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +YT ++   C KG    A+ L+ KMED G   N  TY  ++  L      + + + 
Sbjct: 488 LDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKL 547

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
           L  +I +GL+    +Y +L   A KE GV
Sbjct: 548 LREMIARGLLDEK-SYIYL---ASKETGV 572



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/157 (19%), Positives = 69/157 (43%)

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           L +K  + P   +  +++SL +      A  L  +M   G   D +T++ LI      GL
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
              +  +F  + +  + P+   FN L+ GLC       +L     ++ +G   ++ +Y  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           L+ G+     +  + ++LK +  + V   + +  +++
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 217


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 226/504 (44%), Gaps = 47/504 (9%)

Query: 24  GFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAF 83
           GF+SQ          KG I  L ++ ++ S   S   K  +     N        + DA 
Sbjct: 23  GFHSQRSQTE-----KGMICCLHTSTISRSRSGSGRQKYQKGCSLTN--------IEDAL 69

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
                M+ K   P +V+   LL  L +       + + + +    I  D   +  L+NC 
Sbjct: 70  FSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCF 129

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
            +   V +A  ++ K+   G+  + VT++SL+ GLC      ++++F D ++  G  PN 
Sbjct: 130 SRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNL 189

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ +++   K      A+ LL  +   GG+P++V YN ++ GLCK+    EA+  F +
Sbjct: 190 HTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSE 249

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  KG  P+V +Y+IL+  LC   + EEA+ L  EM   +  P +VT+NIL+  L   G 
Sbjct: 250 IKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGM 309

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              A  ++  M++    P+ A+YN ++   C + KV       D M  + C PN  +YN 
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L                                  I   C+  +  +A +L  EM+  G 
Sbjct: 370 L----------------------------------INGYCKAQRIDEARELFDEMSFRGL 395

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+++ Y++LI GLC  G   EA E+F  M+     PD+     LL  LCK    D +L 
Sbjct: 396 IPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALR 455

Query: 504 VFQMMIEKGQMPNETTYTILVEGI 527
           +F+ M +    PN  TY IL+  +
Sbjct: 456 LFRAMQDSCLKPNLVTYDILIRAM 479



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 176/368 (47%), Gaps = 1/368 (0%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           DV     L+    +  ++  A  V+  ++  G  PDA +++ L+N LC +     AM+  
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
           ++M   GY  N  TYN++++G C +G    ++  L ++ + G  P+   Y+ +++   K+
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD 237

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
           R V  A+ +  +I  KG +P++ +Y++L+ GLC   + EEA   F ++ S    P+VV++
Sbjct: 238 RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTF 297

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           NIL+  LC EG   EA  ++  M      P   TYN L+       K   A  V D M+ 
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQE 395
               P+  SYN +I   C   ++D   +  D+M  R   PN   YN L + LC  G+  E
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  + + +  +  S        ++ SLC+ G    A +L   M      P+  TY  LIR
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIR 477

Query: 456 GLCMEGLI 463
            +   G I
Sbjct: 478 AMYKSGKI 485



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 180/357 (50%), Gaps = 1/357 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++ AF  L +++  G +PD V  ++L+  LC  +K  +A++  + MV+SG  P+  
Sbjct: 131 RLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLH 190

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++   CK G    A+ L++KM+  G   + V YN+++ GLC    ++++L     +
Sbjct: 191 TYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEI 250

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG+ P+ FTYS L+           A  L +++++    P++V++N+L+  LCKEG  
Sbjct: 251 KGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGML 310

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA    + +  KG EPN  +YN L+   C++ +  EA  +   M      P +V+YNIL
Sbjct: 311 SEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNIL 370

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       + D A ++ DEM      P+  +YN +I+ LC  G+     +    M  + C
Sbjct: 371 INGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGC 430

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            P+  T   L   LC +G +  A  + +++ +         Y  +I ++ + GK Y+
Sbjct: 431 SPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 197/436 (45%), Gaps = 34/436 (7%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           C    ++ A+     M+    +P    +  L++ L +  + G  + L +++E      + 
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
             +N L+     L  ++ +   L ++I+ G  P+A T+S L+     E     AM+  D+
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           ++A G +PNL +YN ++ G CK G+T  A+   + +   G  P++V YN ++  LC +  
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             EA ++ +E+ G    P + TY+IL+  L    + + A  + +EM+     P   ++N 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN 408
           ++ +LC EG +      +  M  +  +PN  T                            
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYAT---------------------------- 331

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  ++   C + K ++A  +   M   G  P+  +Y+ LI G C    I+EA E
Sbjct: 332 ------YNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARE 385

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +F  M      P+  N+N L+ GLC++ R   + E+F+ M  +G  P+  T TIL++ + 
Sbjct: 386 LFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLC 445

Query: 529 HQDELELSAEVLKELQ 544
               L+ +  + + +Q
Sbjct: 446 KLGYLDNALRLFRAMQ 461



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 152/333 (45%), Gaps = 3/333 (0%)

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           +  A+   + +I K   P +V ++ LL+ L +       +   + +     E +V  +NI
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+       R + A  +L ++      P  VT++ LI  L +  K   A++  DEMV   
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
           ++P+  +YN II   C  GK  + V  L +M     +P+   YN +   LC    V EA 
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 398 AIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            I   +  K    P  F Y  ++  LC   +  +A  L  EM      PD  T++ L+  
Sbjct: 245 DIFSEIKGK-GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           LC EG++ EA  I  +M E   +P+   +N+L+ G C   +   +  VF  MI KG MPN
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             +Y IL+ G      ++ + E+  E+  R ++
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLI 396


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 228/476 (47%), Gaps = 3/476 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  + +++   L  MVS+G   D+V  T L+  L K  K+++A  V+    S  I 
Sbjct: 335 DSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNIT 394

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT LV+  C+ GN+  A Q++ +ME+     N VT++S++ GL   G L ++  +
Sbjct: 395 PNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADY 454

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + ++   G+ PN  TY  L++  +K +G  AA+ +  D++ +G + N    + L+ GL K
Sbjct: 455 MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRK 514

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  E A   F+D+  +G   + V+Y  L+  L   G    A ++  E+   + SP  V 
Sbjct: 515 NGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVV 574

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN+ I  L   GK   A   L EM      P  A+YN +IA  C EGK    +K L +M 
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMK 634

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
               KPN  TY  L + L   G V++A  ++  + +    +P       +   C   +  
Sbjct: 635 RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMAS-AGFAPTSLTHQRVLQACSGSRRP 693

Query: 430 QAFQLLYE-MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
                ++E M   G   D   Y++L+  LC  G+   A  +   M      PD   FNAL
Sbjct: 694 DVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNAL 753

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +LG CKS   D +  ++  M+ +G  PN  T+  L+ G+     +  +  VL +++
Sbjct: 754 ILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMK 809



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 204/461 (44%), Gaps = 1/461 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L    S    P+ V  T L+   C+A  +  A +V+  M    +I
Sbjct: 370 DRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVI 429

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +++ ++N L K+G +G A   + KM+D G   N VTY +L+ G         +L  
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDV 489

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ +G+  N F    L+    K   +  A  L  D+  +G   + V+Y  L+ GL K
Sbjct: 490 YRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFK 549

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G    A +  ++L  K   P+ V YN+ +  LC  G++ EA   L EM      P   T
Sbjct: 550 TGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQAT 609

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN +I +    GKT  ALK+L EM +   +P+  +Y  ++  L   G V      L++M 
Sbjct: 610 YNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMA 669

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN-SSPQEFYKYVITSLCRKGKTY 429
                P   T+  +   C   +  +    I  L       +    Y  ++  LC  G   
Sbjct: 670 SAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMAR 729

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A  +L EM   G  PD+ T+++LI G C    ++ A  I+  M      P++  FN LL
Sbjct: 730 NATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLL 789

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            GL  + R   +  V   M + G  PN  TY ILV G A +
Sbjct: 790 GGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKK 830



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 215/480 (44%), Gaps = 1/480 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A   +ERM ++G   DVV   +L+     +     A++V+E M + G+ P+  +YT L+ 
Sbjct: 206 ALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIG 265

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK   +  A  L E M   G   + VT ++LV GLC  G  +++      + + G+ P
Sbjct: 266 EYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAP 325

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY  L+++  K R    ++ LL +++++G   +LV Y  L+  L KEG+ EEA    
Sbjct: 326 NHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVL 385

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           R   S    PN V+Y +L+ + C  G  + A ++L +M+     P +VT++ +I  L   
Sbjct: 386 RHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKR 445

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    A   + +M      P+  +Y  +I         +  +     M H   + N    
Sbjct: 446 GCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVV 505

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           + L   L   G ++ A A+ + +  +        Y  ++  L + G    AF++  E+ +
Sbjct: 506 DSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELME 565

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
              +PD+  Y+  I  LC  G   EA      M     +PD   +N ++   C+  +T  
Sbjct: 566 KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSK 625

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +L++ + M      PN  TYT LV G+     ++ +  +L E+        S   + V+Q
Sbjct: 626 ALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 210/465 (45%), Gaps = 9/465 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP--DASSYTYLVNCL 143
           L  M  +G   D V  +  L  LC+   + +A  + EM+V    I   D   +  L++  
Sbjct: 138 LSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGY 197

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK  ++  A+ +VE+M   G   + V YNSLV G    G+ + +L+ ++R+   G+ PN 
Sbjct: 198 CKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNV 257

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ L+    K +G+  A  L + ++  G  P++V+ + L+ GLC++G+  EA   FR+
Sbjct: 258 VTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFRE 317

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   G  PN V+Y  L+ SL    R  E+  LL EM        +V Y  L+  L   GK
Sbjct: 318 MDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGK 377

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY-- 381
            + A  VL         P+  +Y  ++   C  G +D   + L QM  +   PN  T+  
Sbjct: 378 IEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSS 437

Query: 382 --NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
             NGL     +GK  +    ++  G   N      Y  +I    +      A  +  +M 
Sbjct: 438 IINGLVKRGCLGKAADYMRKMKDSGIAPNVVT---YGTLIDGFFKFQGQEAALDVYRDML 494

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G   +++   SL+ GL   G IE A  +F  M+E     D  N+  L+ GL K+    
Sbjct: 495 HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMP 554

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + +V Q ++EK   P+   Y + +  +    +   +   LKE++
Sbjct: 555 AAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMR 599



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 175/389 (44%), Gaps = 7/389 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF   + ++ K   PD V     +  LC   K  +A   ++ M ++G+ PD ++Y  ++ 
Sbjct: 556 AFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIA 615

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C++G    A++L+++M+      N +TY +LV GL   G + ++   L+ +   G  P
Sbjct: 616 ARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAP 675

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
            + T+  +L+A    R     +++ + ++  G   ++  YN L+  LC  G    A    
Sbjct: 676 TSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVL 735

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++ ++G  P+ +++N L+   C     + A  + A+M     SP I T+N L+G L   
Sbjct: 736 DEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESA 795

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G+   A  VL +M K    P+  +Y+ ++     +      ++   +M  +   P   TY
Sbjct: 796 GRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 855

Query: 382 NGL----AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
           N L    A    + + +E F+ ++  G    SS    Y  ++    +     +   LL +
Sbjct: 856 NSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSST---YDILLNGWSKLRNGIEVRILLKD 912

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           M + GF P   T SS+ R     G+  EA
Sbjct: 913 MKELGFKPSKGTISSMSRAFSRPGMTGEA 941



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 9/388 (2%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFL----DRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
           P +T+T NS++   C L +L  +L  L        Q  +  +  +Y+  L A  ++    
Sbjct: 73  PGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGR 132

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEP-NVVSYNI 278
            A  +L ++  +G   + V+ +  L GLC+ G   EA      L   +G +  +VV +N 
Sbjct: 133 LAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNA 192

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+   C       A  ++  M     +  +V YN L+    + G  D AL+V++ M    
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG 252

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
             P+  +Y  +I   C    +D      + M      P+  T + L   LC  G+  EA+
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAY 312

Query: 398 AIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
           A+ + + +K   +P    Y  +I SL +  +  ++  LL EM   G   D   Y++L+  
Sbjct: 313 ALFREM-DKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDR 371

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           L  EG IEEA ++    +  +  P+   +  L+   C++   D + +V   M EK  +PN
Sbjct: 372 LGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPN 431

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQ 544
             T++ ++ G+  +  L  +A+ +++++
Sbjct: 432 VVTFSSIINGLVKRGCLGKAADYMRKMK 459



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 169/364 (46%), Gaps = 15/364 (4%)

Query: 25  FYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFL 84
           F + +  L  FS  K F++ + +T   + P  + Y             R R+ K + A  
Sbjct: 578 FINCLCTLGKFSEAKSFLKEMRNTG--LEPDQATYN-------TMIAARCREGKTSKALK 628

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
            L+ M     KP+++  T L+  L +A  +KKA  ++  M S+G  P + ++  ++    
Sbjct: 629 LLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACS 688

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
                   +++ E M   G   +   YN+LV  LC  G    +   LD ++ +G+ P+  
Sbjct: 689 GSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTI 748

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T++ L+    K   +  A  +   ++ +G  PN+ ++N LL GL   GR  EA     D+
Sbjct: 749 TFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDM 808

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G EPN ++Y+IL+     +    EA  L  EM      P   TYN L+   A  G  
Sbjct: 809 KKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMM 868

Query: 325 DHALKVLDEMVKGRFRPSAASYNPII---ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           + A ++  EM +     ++++Y+ ++   ++L +  +V +++K + ++     KP++GT 
Sbjct: 869 NQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGF---KPSKGTI 925

Query: 382 NGLA 385
           + ++
Sbjct: 926 SSMS 929



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 105/216 (48%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A + L+ M+++G  PD +    L+   CK++ +  A  +   M+  G+ P+ +++  L+
Sbjct: 730 NATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLL 789

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             L   G +G A  ++  M+  G   N +TY+ LV G     N  ++L+    ++ KG +
Sbjct: 790 GGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFI 849

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P A TY+ L+    K   ++ A +L  ++  +G      +Y++LL G  K     E    
Sbjct: 850 PKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRIL 909

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            +D+   GF+P+  + + + R+    G   EA  LL
Sbjct: 910 LKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLL 945



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 3/244 (1%)

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           V+YNI + +L+  G    A  VL EM K        + +  +  LC  G V       + 
Sbjct: 116 VSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEM 175

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           +   R           A++ G  KVQ+   A A+++ +  +  +     Y  ++      
Sbjct: 176 LVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHS 235

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G    A +++  M   G  P+  TY++LI   C    ++EA  ++  M      PDV   
Sbjct: 236 GDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTL 295

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           +AL+ GLC+  +   +  +F+ M + G  PN  TY  L++ +A       S  +L E+  
Sbjct: 296 SALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS 355

Query: 546 RQVV 549
           R VV
Sbjct: 356 RGVV 359



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 88/190 (46%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   L++AF    +M+ +G  P++     LL  L  A ++ +A  V+  M   G+ P+  
Sbjct: 759 KSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNL 818

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  LV    KK N   A++L  +M   G+     TYNSL+      G +NQ+ +    +
Sbjct: 819 TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEM 878

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G++  + TY  LL    K R       LL D+   G KP+  + + +     + G T
Sbjct: 879 KRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMT 938

Query: 255 EEAIRFFRDL 264
            EA R  + L
Sbjct: 939 GEARRLLKTL 948


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 217/446 (48%), Gaps = 4/446 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTYLVNCL 143
           L RM   G  P+V   + +L  LC  +  ++A+ + +MM   G    P+  +Y  +++  
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGF 275

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
            K+G  G A  L  +M   G   + VTYN ++  LC    ++++   L ++   G  P+ 
Sbjct: 276 FKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDT 335

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ ++        +  A K+   + ++G  PN+V  N  L  LCK GR++EA   F  
Sbjct: 336 VTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDS 395

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + +KG +P++VSY  LL     EG + +   L   M     +     +NILI + A  G 
Sbjct: 396 MTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGM 455

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+ +  EM +    P   +Y+ +I+     G++   ++  +QM  R  +PN   Y+ 
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHS 515

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
           +    C  G + +A  ++  + NK    P   F+  VI SLC+ G+   A  +   +T  
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI 575

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD  T++SLI G C+ G +++A +I   ME    + D+  ++ LL G  K+ R +  
Sbjct: 576 GERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDG 635

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGI 527
           L +F+ M  KG  PN  TY I++ G+
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGL 661



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 234/522 (44%), Gaps = 41/522 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
              M  +G KPDVV    ++  LCKA  M KA  V+  M ++G  PD  +Y  +++    
Sbjct: 288 FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYAT 347

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A ++  KM+  G   N V  NS +  LC  G   ++ +  D +  KG  P+  +
Sbjct: 348 LGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVS 407

Query: 206 YSFLLEA----------------------------------AYKERG-VHAAMKLLDDII 230
           Y  LL                                    AY +RG V  AM +  ++ 
Sbjct: 408 YCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ 467

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +G  P++V+Y+ +++   + GR  +A+  F  + ++G +PN   Y+ +++  CM G   
Sbjct: 468 QQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLV 527

Query: 291 EANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           +A EL++EM + G   P IV +N +I SL   G+   A  + D +     RP   ++  +
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSL 587

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNK 406
           I   C  GK+D   K LD M     + +  TY+ L  L G    G++ +   + + +  K
Sbjct: 588 IDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTL--LDGYFKNGRINDGLTLFREMQRK 645

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  ++  L R G+T  A +  +EM + G T     Y  ++ GLC     +EA
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           + +F  +   + K  +   N ++  + K +R + + E+F  +   G +PNE+TY +++  
Sbjct: 706 IILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIIN 765

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGIEV 568
           +     +E +  +   ++   +V  S +   +++   E  E+
Sbjct: 766 LLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEI 807



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 215/458 (46%), Gaps = 42/458 (9%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ-FLDR 193
           +Y+ L++C C+       + L   +   G   + +T ++L++ LC      +++   L R
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG--KPNLVSYNVLLTGLCKE 251
           + + G VPN F+YS +L+          A+ L   +  +GG   PN+V+YN ++ G  KE
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G T +A   F ++  +G +P+VV+YN+++ +LC     ++A  +L +M      P  VTY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N +I   A  G+   A K+  +M      P+    N  +A LC  G+     +  D M  
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 372 RRCKPN-------------EGTY------------NGLAMLCGV-----------GKVQE 395
           +  KP+             EG +            NG+A  C V           G V +
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458

Query: 396 AFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           A  I   +  +Q  SP    Y  VI++  R G+   A +   +M   G  P++  Y S+I
Sbjct: 459 AMLIFTEM-QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSII 517

Query: 455 RGLCMEGLIEEALEIFVVMEEYDY-KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           +G CM G + +A E+   M      +PD+  FN+++  LCK  R   + ++F ++ + G+
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGE 577

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            P+  T+T L++G     +++ + ++L  +++  V ++
Sbjct: 578 RPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETD 615



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 171/369 (46%), Gaps = 9/369 (2%)

Query: 199 LVP-NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           +VP    TYS L++   + R     + L   I+  G K + ++ + LL  LC   RTEEA
Sbjct: 152 VVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEA 211

Query: 258 IR-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNIL 314
           +      +   G  PNV SY+I+L+ LC     + A +L   M  +GG  SP +V YN +
Sbjct: 212 VNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTV 271

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G+T  A  +  EM +   +P   +YN II  LC    +D     L QM     
Sbjct: 272 IHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGA 331

Query: 375 KPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           +P+  TYN   M+ G   +G+++EA  + + + ++            + SLC+ G++ +A
Sbjct: 332 QPDTVTYN--CMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEA 389

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++   MT  G  PD  +Y +L+ G   EG   + + +F  M+      D   FN L+  
Sbjct: 390 AEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHA 449

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             K    D ++ +F  M ++G  P+  TY+ ++   +    L  + E   ++  R +   
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPN 509

Query: 552 SAVERLVMQ 560
           +AV   ++Q
Sbjct: 510 TAVYHSIIQ 518



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 4/383 (1%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA-AYKERGVHAAM 223
           P    TY+ L+   C     +  L     +++ GL  +  T S LL+   Y  R   A  
Sbjct: 154 PLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVN 213

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG--FEPNVVSYNILLR 281
            LL  +   G  PN+ SY+++L GLC    ++ A+  F+ +  +G    PNVV+YN ++ 
Sbjct: 214 VLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIH 273

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
               EG   +A  L  EM      P +VTYN++I +L      D A  VL +M     +P
Sbjct: 274 GFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQP 333

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAII 400
              +YN +I    + G++    K   +M  R   PN    N  LA LC  G+ +EA  I 
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            S+  K +      Y  ++     +G       L   M   G   D   ++ LI      
Sbjct: 394 DSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKR 453

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G++++A+ IF  M++    PDV  ++ ++    +  R   ++E F  M+ +G  PN   Y
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
             +++G      L  + E++ E+
Sbjct: 514 HSIIQGFCMHGGLVKAKELVSEM 536



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 176/371 (47%), Gaps = 4/371 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDA 133
           R  +L DA  +  +MV++G +P+     +++   C    + KA +++  M++ GI  PD 
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDI 546

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             +  ++N LCK G V  A  + + + D G   + +T+ SL+ G C++G ++++ + LD 
Sbjct: 547 VFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDA 606

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G+  +  TYS LL+  +K   ++  + L  ++  KG KPN V+Y ++L GL + GR
Sbjct: 607 MEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A + F ++   G    V  Y I+L  LC     +EA  L  ++   +   +I   N 
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNT 726

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I ++    + + A ++   +      P+ ++Y  +I  L  +G V+        M    
Sbjct: 727 MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSG 786

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P     N +  ML   G++ +A   +  +  K+          +++   RKGK ++  
Sbjct: 787 IVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDM 846

Query: 433 QLLYEMTKYGF 443
           +LL    KY F
Sbjct: 847 KLLP--AKYNF 855



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/261 (20%), Positives = 98/261 (37%), Gaps = 35/261 (13%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ ++ND       M  KG KP+ V    +L  L +A +   A K    M+ SG  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
              S Y  ++  LC+      A+ L +K+       +    N+++  +  +    ++ + 
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   GL+PN  T                                   Y V++  L K
Sbjct: 744 FATISASGLLPNEST-----------------------------------YGVMIINLLK 768

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +G  E+A   F  +   G  P     N ++R L  +G   +A   L+++DG        T
Sbjct: 769 DGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEAST 828

Query: 311 YNILIGSLAYHGKTDHALKVL 331
            ++++   +  GK    +K+L
Sbjct: 829 TSLMLSLFSRKGKYHEDMKLL 849


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 228/451 (50%), Gaps = 16/451 (3%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LL  L  A K  +A+++ + +++    P+A +Y  L+   CK G +  A+ +   M+  G
Sbjct: 3   LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  T N+L+ GLC +G ++ +L+    +     +P + +++ LL   +    V  A+
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKE----GRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             L D+          +YN++L GLC E     R E+A+ FF+++ + G EP++ SY+IL
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL 182

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           L +L   GR  EA+ L + M     SP I+TYN+L+      G+T  A  ++ E++K  +
Sbjct: 183 LSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEA-- 396
            P+  +Y+ II   C   KV+   +   +M    C PN  T+N L A  C  G +++A  
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 299

Query: 397 -FAIIQSLGNKQNSSPQEFYKYVITSLCRK-GKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            FA ++ +G K        Y  +I SLC+K G  Y A  L  ++   G TP   TY+SLI
Sbjct: 300 LFAEMEKIGCKATIVT---YNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           +G C    + EA++ F  ME     P+V  ++ L+ GLCK RR   + +  + M   G  
Sbjct: 357 QGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYT 415

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQL 545
           P   TY  L+ G     EL+ +    ++++L
Sbjct: 416 PTVVTYGGLINGFCKCGELKSALLFFEKMKL 446



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 217/464 (46%), Gaps = 12/464 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ A      M S G  P+      LL  LC+  +M  A+K+   M +   +P ++S+ 
Sbjct: 47  QMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHN 106

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM----LGNLNQSLQFLDR 193
            L+      G V  A+  ++ M        T TYN +++GLC        L Q+++F   
Sbjct: 107 ILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKE 166

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G+ P+  +Y  LL A      +  A  L   +      P++++YNVL+ G CK G+
Sbjct: 167 MKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQ 223

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T EA    +++   G+EPNV +Y+I++   C   + EEA E+  +M   +  P  VT+N 
Sbjct: 224 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 283

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE-GKVDLVVKCLDQMFHR 372
           LI      G  + A+K+  EM K   + +  +YN +I  LC + G V   V   +++   
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQ 430
              P   TYN L    C   ++ EA      +  K   +P    Y  +I  LC+  +  +
Sbjct: 344 GLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK--CAPNVITYSILIDGLCKVRRMKE 401

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A + L +M  +G+TP   TY  LI G C  G ++ AL  F  M+     P+   FN L+ 
Sbjct: 402 AAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLID 461

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           GLCK+ R +  L +   M  +G  P+  TY  L+ G+   + +E
Sbjct: 462 GLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVE 505



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 204/428 (47%), Gaps = 13/428 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLC----KANKMKKAIKVMEMMVSSGIIPDA 133
           ++ DA   L+ M              +L  LC     AN++++A++  + M +SG+ PD 
Sbjct: 117 RVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDL 176

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            SY  L++ L   G +  A  L   M       + +TYN L+ G C +G   ++   +  
Sbjct: 177 ESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ G  PN FTYS ++    K   V  A ++   +I     PN V++N L+ G CK G 
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME-GRWEEANELLAEMDGGDRSPTIVTYN 312
            E+AI+ F ++   G +  +V+YN L+ SLC + G    A +L  +++G   +PTIVTYN
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI       +   A++  DEM +G+  P+  +Y+ +I  LC   ++    K L+ M   
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAH 412

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P   TY GL    C  G+++ A    + +     +     +  +I  LC+  +    
Sbjct: 413 GYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDG 472

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL  M   G  PD  TY+ LI GLC    +E+A  +F  M      P+V  FN L+ G
Sbjct: 473 LRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRG 529

Query: 492 LCKSRRTD 499
           LC  ++ +
Sbjct: 530 LCAQKKVE 537



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 186/380 (48%), Gaps = 11/380 (2%)

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N+L+ GL      +Q+L+    ++     PNA TY+ L+    K   +H A+ +  D+ +
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G  PN  + N LL GLC+ G+   A++ FR++ +  F P   S+NILLR   M GR  +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT----DHALKVLDEMVKGRFRPSAASYN 347
           A   L +M     S    TYN+++  L +  K+    + A++   EM      P   SY+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNK 406
            +++ L   G++         M    C P+  TYN L    C +G+  EA ++++ +  K
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI-LK 236

Query: 407 QNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
               P  F Y  +I   C+  K  +A+++  +M +    P++ T+++LI G C  G++E+
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 296

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSR-RTDLSLEVFQMMIEKGQMPNETTYTILV 524
           A+++F  ME+   K  +  +N L+  LCK R     ++++F  +   G  P   TY  L+
Sbjct: 297 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356

Query: 525 EGIAHQDELELSAEVLKELQ 544
           +G      L  + +   E++
Sbjct: 357 QGFCDARRLSEAMQYFDEME 376



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 5/291 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A+    +M+     P+ V    L+   CKA  ++ AIK+   M   G      +Y 
Sbjct: 258 KVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYN 317

Query: 138 YLVNCLCKK-GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            L++ LCKK G V  A+ L  K+E  G     VTYNSL++G C    L++++Q+ D +  
Sbjct: 318 TLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG 377

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           K   PN  TYS L++   K R +  A K L+D+ A G  P +V+Y  L+ G CK G  + 
Sbjct: 378 K-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKS 436

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+ FF  +   G  PN V +N L+  LC   R  +   LL  M      P ++TYN LI 
Sbjct: 437 ALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLIS 496

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            L    + + A ++ D M      P+  ++N +I  LC++ KV+     LD
Sbjct: 497 GLCSANRVEDAQRLFDGMACA---PNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 56/113 (49%)

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++L+ GL      ++AL +F  +    + P+   +N L+ G CK  +   ++ VF  M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            G +PN +T   L+ G+    ++  + ++ +E+Q    +  SA   ++++  F
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF 113


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 199/379 (52%), Gaps = 2/379 (0%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL-DRLIQKGLVPNAFTYSFLL 210
           A +L+  M   G   N  TYN LVR LC  G   ++L  + D +   G  PN  TY+ L+
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
            A  +   V AA +L+  +   G +P+LV++N ++ GLCK GR E+A + F ++  +G  
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT 257

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P+ VSYN L+   C  G   EA  + AEM      P +VT+  LI ++   G  + A+ +
Sbjct: 258 PDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL 317

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCG 389
           + +M +   R +  ++  +I   C  G +D  +  + +M   R +P+   YN L    C 
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           +G++ EA  +I  +  K        Y  +++  C+ G T  AF+L  +M K G  PD+ T
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAIT 437

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           YSSLIRGLC E  + +A E+F  M +   +PD   +  L+ G CK      +L +   MI
Sbjct: 438 YSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497

Query: 510 EKGQMPNETTYTILVEGIA 528
           +KG +P+  TY++L++G++
Sbjct: 498 KKGVLPDVVTYSVLIDGLS 516



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 235/471 (49%), Gaps = 16/471 (3%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P+VV    L+   C+A ++  A +++ +M   G+ P   ++  +VN LCK G 
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A ++ ++M   G   + V+YN+LV G C  G L+++L     + QKG+VP+  T++ 
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTS 300

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+ A  +   +  A+ L+  +  +G + N  ++  L+ G C+ G  ++A+   +++    
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P+VV YN+L+   C  GR +EA EL+ EM+     P +VTY+ ++      G TD A 
Sbjct: 361 IQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAF 420

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++  +M+K    P A +Y+ +I  LC E ++    +  ++M     +P+E TY  L    
Sbjct: 421 ELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGH 480

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G VQ+A ++   +  K        Y  +I  L +  +T +A +LL+++      PD+
Sbjct: 481 CKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN 540

Query: 448 YTYS---------------SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             Y                +L++G  M+GL+ +A +++  M +  +K D   ++ L+ G 
Sbjct: 541 IKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGH 600

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           C+      +L   + ++  G  PN T+   LV G+  +     +  V++EL
Sbjct: 601 CRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 194/405 (47%), Gaps = 16/405 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    + M  +G  PD V    L+   CKA  + +A+ V   M   G++PD  ++T
Sbjct: 240 RMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFT 299

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ +C+ GN+  A+ LV +M + G   N  T+ +L+ G C  G L+ +L  +  + + 
Sbjct: 300 SLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMREC 359

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+   Y+ L+    K   +  A +L+ ++ AKG KP++V+Y+ +L+G CK G T+ A
Sbjct: 360 RIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSA 419

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               R +  KG  P+ ++Y+ L+R LC E R  +A EL  +M      P   TY  LI  
Sbjct: 420 FELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDG 479

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    AL + DEM+K    P   +Y+ +I  L    +     + L ++++    P+
Sbjct: 480 HCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPD 539

Query: 378 EGTYNGLAMLCGVGKVQEAFAII----------------QSLGNKQNSSPQEFYKYVITS 421
              Y  L   C   + +   A++                QS+ ++        Y  +I  
Sbjct: 540 NIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHG 599

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
            CR G   +A     ++ + GF+P+S +  SL+RGL  EG+  EA
Sbjct: 600 HCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEA 644



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 61/397 (15%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG---------- 128
           L++A      M  KG  PDVV  T+L++ +C+A  +++A+ ++  M   G          
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335

Query: 129 -------------------------IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
                                    I P    Y  L+N  CK G +  A +L+ +ME  G
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              + VTY++++ G C +G+ + + +   ++++KG+VP+A TYS L+    +ER +  A 
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L + ++  G +P+  +Y  L+ G CKEG  ++A+    ++  KG  P+VV+Y++L+  L
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL 515

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYN---------------ILIGSLAYHGKTDHAL 328
               R +EA  LL ++   D  P  + Y                 L+   +  G  + A 
Sbjct: 516 SKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQAD 575

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR---RCKPNEGTYNGLA 385
           KV   M+   ++   + Y+ +I   C  G    ++K L   FH+   RC  +  + + ++
Sbjct: 576 KVYQSMLDRHWKLDGSVYSVLIHGHCRGGN---IMKALS--FHKQLLRCGFSPNSTSTIS 630

Query: 386 MLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
           ++ G+   G   EA  +IQ L N  + +  E  K +I
Sbjct: 631 LVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALI 667


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 224/476 (47%), Gaps = 41/476 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + + A+  L  ++  G   +      LL  L +A + K+   ++  M    I P+  
Sbjct: 282 RSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVV 341

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM---EDYGY--PTNTVTYNSLVRGLCMLGNLNQSLQ 189
           ++  L+N LCK   V  A+++ EKM   E  G+    + +TYN+L+ GLC +G   + L 
Sbjct: 342 TFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLG 401

Query: 190 FLDRL-IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
            ++R+  Q   +PN  TY+ L++   K   + AA +L D +   G  PN+V+ N L+ G+
Sbjct: 402 LVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGM 461

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CK GR   A+ FF ++  KG + N V+Y  L+R+ C     E+A EL  EM     SP  
Sbjct: 462 CKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDA 521

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           + Y  LI  L+  GK D A  VL +M +  F P   S+N +I   C + K+D   + L +
Sbjct: 522 IVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKE 581

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           M +   KP+  T                                  Y  +I+   + G  
Sbjct: 582 MENAGIKPDGVT----------------------------------YNTLISHFSKTGDF 607

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-YKPDVDNFNA 487
             A +L+ +M K G  P   TY +LI   C+ G ++EA++IF  M       P+   +N 
Sbjct: 608 STAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L+  LC+  + DL+L +   M  KG  PN  T+  + +G+  ++ L  + E++  +
Sbjct: 668 LINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 188/389 (48%), Gaps = 36/389 (9%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDASSYTYLVNCLCKKGNVGYAM 153
           +PDV+    L+  LCK  + ++ + ++E M S    +P+  +Y  L++  CK   +  A 
Sbjct: 377 EPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           +L ++M   G P N VT N+LV G+C  G +N +++F + +  KGL  NA TY+ L+ A 
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
                +  AM+L D+++  G  P+ + Y  L++GL + G+ + A      +   GF P++
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           VS+N+L+   C + + +EA E+L EM+     P  VTYN LI   +  G    A +++ +
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
           MVK    P+  +Y  +I   C  G +D                                 
Sbjct: 617 MVKEGLVPTVVTYGALIHAYCLNGNLD--------------------------------- 643

Query: 394 QEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            EA  I + + +     P    Y  +I SLCRK +   A  L+ +M   G  P++ T+++
Sbjct: 644 -EAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNA 702

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           + +GL  +  + +A E+   M E+   PD
Sbjct: 703 MFKGLQEKNWLSKAFELMDRMTEHACNPD 731



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 229/496 (46%), Gaps = 20/496 (4%)

Query: 71  DTRHRDHKLNDAFLQLERMVS-KGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMM---- 124
           D   R  +++DA   L+ M+  K   P      ++++  L K +K+ +A+   E++    
Sbjct: 200 DVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVS 259

Query: 125 --VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
                 + P++   T L++ LC+ G    A  ++  +   G      + N+L+  L    
Sbjct: 260 KFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAR 319

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK------- 235
              +    L  + +  + PN  T+  L+    K R V  A+++ + +   GG+       
Sbjct: 320 EFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM--NGGESNGFLVE 377

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANE 294
           P++++YN L+ GLCK GR EE +     + S+    PN V+YN L+   C     E A E
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L  +M+     P +VT N L+  +  HG+ + A++  +EM     + +A +Y  +I   C
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC 497

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
           +   ++  ++  D+M    C P+   Y  L + L   GK+  A  ++  +     S    
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIV 557

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            +  +I   CRK K  +A+++L EM   G  PD  TY++LI      G    A  +   M
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP-NETTYTILVEGIAHQDE 532
            +    P V  + AL+   C +   D ++++F+ M    ++P N   Y IL+  +  +++
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQ 677

Query: 533 LELSAEVLKELQLRQV 548
           ++L+  ++ +++++ V
Sbjct: 678 VDLALSLMDDMKVKGV 693



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 220/457 (48%), Gaps = 16/457 (3%)

Query: 103 NLLYD-LCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLV-NCLCKKGNVGYAMQ----- 154
           N+L D L +  ++  A+ ++ EM+      P  S+  ++V + L K+  VG A+      
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255

Query: 155 -LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            LV K  ++    N++    L+  LC  G  +++   L  L++ G V  A + + LL A 
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL---PSKGF- 269
            + R       LL ++     +PN+V++ +L+  LCK  R +EA+  F  +    S GF 
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375

Query: 270 -EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS-PTIVTYNILIGSLAYHGKTDHA 327
            EP+V++YN L+  LC  GR EE   L+  M    R  P  VTYN LI         + A
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAA 435

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
            ++ D+M K    P+  + N ++  +C  G+++  V+  ++M  +  K N  TY  L   
Sbjct: 436 RELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRA 495

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C V  +++A  +   +     S     Y  +I+ L + GK  +A  +L +M + GF+PD
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             +++ LI G C +  ++EA E+   ME    KPD   +N L+    K+     +  + +
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            M+++G +P   TY  L+        L+ + ++ +++
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 205/454 (45%), Gaps = 29/454 (6%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--PTNTV 169
           N   K + + +   S  I    ++ T L+ C       G A  + E    Y    P+  +
Sbjct: 138 NSHNKLLDLFKTSKSHKIPLSVNAATLLIRCF------GRAQMVDESFLVYNELCPSRRL 191

Query: 170 TY--NSLVRGLCMLGNLNQSLQFLDRLIQKG--LVPNAFTYSFLLEAAYKERGVHAAMKL 225
           T+  N L+  L   G ++ +L  LD ++Q      PN+ T   +  A  K   V  A+  
Sbjct: 192 THIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDE 251

Query: 226 LDDIIAKGGK-------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
            ++I+    K       PN +    L++ LC+ GRT+ A      L   G      S N 
Sbjct: 252 -EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNA 310

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           LL +L     ++  N LLAEM   D  P +VT+ ILI  L    + D AL+V ++M  G 
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370

Query: 339 -----FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNGLA-MLCGVG 391
                  P   +YN +I  LC  G+ +  +  +++M  + RC PN  TYN L    C   
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430

Query: 392 KVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
            ++ A  +   + NK    P       ++  +C+ G+   A +   EM   G   ++ TY
Sbjct: 431 MIEAARELFDQM-NKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTY 489

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++LIR  C    IE+A+E+F  M E    PD   +  L+ GL ++ + D +  V   M E
Sbjct: 490 TALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE 549

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            G  P+  ++ +L+ G   +++L+ + E+LKE++
Sbjct: 550 AGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEME 583



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 161/319 (50%), Gaps = 4/319 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M   G  P+VV    L+  +CK  ++  A++    M   G+  +A +YT L+   C 
Sbjct: 439 FDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCN 498

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             N+  AM+L ++M + G   + + Y +L+ GL   G L+++   L ++ + G  P+  +
Sbjct: 499 VNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVS 558

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+    ++  +  A ++L ++   G KP+ V+YN L++   K G    A R  + + 
Sbjct: 559 FNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV 618

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIVTYNILIGSLAYHGKT 324
            +G  P VV+Y  L+ + C+ G  +EA ++  +M    +  P  V YNILI SL    + 
Sbjct: 619 KEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQV 678

Query: 325 DHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
           D AL ++D+M VKG  +P+  ++N +   L  +  +    + +D+M    C P+  T   
Sbjct: 679 DLALSLMDDMKVKG-VKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEI 737

Query: 384 LA-MLCGVGKVQEAFAIIQ 401
           L   L  VG+  +  + +Q
Sbjct: 738 LTEWLSAVGETAKLKSFVQ 756



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 139/283 (49%), Gaps = 1/283 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++N A      M  KG K + V  T L+   C  N ++KA+++ + M+ +G  PDA  Y 
Sbjct: 466 RINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYY 525

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L + G +  A  ++ KM++ G+  + V++N L+ G C    L+++ + L  +   
Sbjct: 526 TLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENA 585

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+  TY+ L+    K      A +L+  ++ +G  P +V+Y  L+   C  G  +EA
Sbjct: 586 GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEA 645

Query: 258 IRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           ++ FRD+ S     PN V YNIL+ SLC + + + A  L+ +M      P   T+N +  
Sbjct: 646 MKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFK 705

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
            L        A +++D M +    P   +   +   L + G+ 
Sbjct: 706 GLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGET 748



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 1/189 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R +KL++A+  L+ M + G KPD V    L+    K      A ++M+ MV  G++P   
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +Y  L++  C  GN+  AM++   M      P NTV YN L+  LC    ++ +L  +D 
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDD 687

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  KG+ PN  T++ + +   ++  +  A +L+D +      P+ ++  +L   L   G 
Sbjct: 688 MKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGE 747

Query: 254 TEEAIRFFR 262
           T +   F +
Sbjct: 748 TAKLKSFVQ 756


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 231/453 (50%), Gaps = 5/453 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME-DY 162
           ++  L KA  + +A++V E M S   +P   +Y  L+N  C  G  G A+ L + M+ + 
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
               +  TYN+L+ GLC  GN   + + L  +  K +  N FTYS ++++  KE     +
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            K+L++++A G  P++ ++N ++ G  +    E+A   ++ +   G++P+ VSY+IL+  
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195

Query: 283 LCMEGRWEEANELLAEMD--GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           L   G+ +E+ ++L+EM        P ++T++ LI  L   G+ + AL+V   M++   +
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAI 399
           P+  +Y  +IA LC   KV    +  ++M      P+   YN L A  C  G + EA  +
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 315

Query: 400 IQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            + +       P    +  +I   C+ GK  +A +L+ EM   G   D+ TY  LI GL 
Sbjct: 316 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLS 375

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
               ++EALE++  M E  +  D  +  + + GLCK+   D +  VF+   + G +PN  
Sbjct: 376 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 435

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           T+ IL E +     +E + ++++  + R + ++
Sbjct: 436 TFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 468



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 172/331 (51%), Gaps = 4/331 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K  +++  LE M++ G  PDV     ++    ++N M+KA +V + MV SG  PD  
Sbjct: 128 KEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNV 187

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEK--MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           SY  L++ L K G +  +++++ +  M   GY  N +T+++L+ GLC  G L ++L+   
Sbjct: 188 SYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFG 247

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +++ G  PN +TY+ L+    +   V  A +L + +      P+ V+YN L+ G CK G
Sbjct: 248 SMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRG 307

Query: 253 RTEEAIRFFRDLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
             +EA + +R++    G +P +V++N L+   C  G+   ANEL+AEM     +    TY
Sbjct: 308 SMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTY 367

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
            ILI  L+   K D AL+V  +M + +F     S    +  LC  G +D      +    
Sbjct: 368 RILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRK 427

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
               PN  T+  L+  L  +G+V++A  +++
Sbjct: 428 SGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 193/383 (50%), Gaps = 5/383 (1%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            Y+ +V+ L   G L Q+L+  + +  +  VP+  TY+ L+ +         A+ L   +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 230 I-AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
              K  +P+  +YN L++GLC  G TE A +   ++  K    NV +Y+ +++SL  E +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            EE+ ++L EM     +P +  +N ++   A     + A +V   MV+  ++P   SY+ 
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCK--PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN 405
           +I  L   GK+D  +K L +M  R     PN  T++ L   LC  G++++A  +  S+  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                 +  Y  +I  LCR  K  QA +L  +MT+    PD+  Y+SLI G C  G ++E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 466 ALEIFVVME-EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           A +++  M      +P +  FN L+ G CK  +   + E+   M  KG   +  TY IL+
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 525 EGIAHQDELELSAEVLKELQLRQ 547
            G++   +L+ + EV K+++ ++
Sbjct: 372 AGLSRATKLDEALEVYKQMREKK 394



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 176/355 (49%), Gaps = 6/355 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M  K    +V   ++++  L K  K +++ KV+E M+++G  PD  ++  ++    +
Sbjct: 104 LSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFAR 163

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK--GLVPNA 203
             N+  A ++ + M + GY  + V+Y+ L+ GL  +G L++SL+ L  +  +  G VPN 
Sbjct: 164 SNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNV 223

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            T+S L+    +   +  A+++   ++  G KPN  +Y  L+ GLC+  +  +A   F  
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG-DRSPTIVTYNILIGSLAYHG 322
           +      P+ V+YN L+   C  G  +EA +L  EM GG    PTIVT+N LI      G
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE-GTY 381
           K   A +++ EM          +Y  +IA L    K+D  ++   QM  ++   +     
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLL 435
           + +  LC  G + +A+A+ ++   K  + P  E ++ +  SL + G+   A +L+
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEAT-RKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 8/391 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F  ++R   K  +PD      L+  LC +   + A K++  M    I  +  +Y+ ++
Sbjct: 66  DLFQSMKR--EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII 123

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             L K+     + +++E+M   G   +   +N +++G     N+ ++ +    +++ G  
Sbjct: 124 KSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYK 183

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDII--AKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           P+  +Y  L+    K   +  ++K+L ++   A G  PN+++++ L+ GLC+ G  E+A+
Sbjct: 184 PDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 243

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  +   G +PN  +Y  L+  LC   +  +A EL  +M      P  V YN LI   
Sbjct: 244 EVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGY 303

Query: 319 AYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              G  D A K+  EM  G   +P+  ++N +I   C  GK+    + + +M  +    +
Sbjct: 304 CKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAAD 363

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQN-SSPQEFYKYVITSLCRKGKTYQAFQLL 435
             TY  L A L    K+ EA  + + +  K+    P     +V   LC+ G   QA+ + 
Sbjct: 364 TCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFV-GGLCKTGNIDQAYAVF 422

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
               K G  P+  T+  L   L   G +E+A
Sbjct: 423 EATRKSGAVPNPETFRILSESLIKLGRVEDA 453



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 2/215 (0%)

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           M K +      +Y+ ++  L   G +   ++  + M    C P+  TYN L    C  G+
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 393 VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
             +A  + QS+  ++   P  + Y  +I+ LC  G T  A +LL EM       + +TYS
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           S+I+ L  E   EE+ ++   M      PDV  FN ++ G  +S   + + EV+Q M+E 
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           G  P+  +Y IL+ G+A   +L+ S ++L E+ +R
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMR 215



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 71/140 (50%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G +P +V    L+   CK  K+ +A +++  M + G+  D  +Y  L+  L +   +  A
Sbjct: 324 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEA 383

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           +++ ++M +  +  + V+  S V GLC  GN++Q+    +   + G VPN  T+  L E+
Sbjct: 384 LEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 443

Query: 213 AYKERGVHAAMKLLDDIIAK 232
             K   V  A KL++   A+
Sbjct: 444 LIKLGRVEDAQKLMEPAKAR 463


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 238/515 (46%), Gaps = 40/515 (7%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L  ++M+  G  PDV     +L  L   N + KA  V  MM   GI P   +Y  +++  
Sbjct: 166 LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSY 225

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK+G V  A++L+ +M++ G   N VTYN LV GL   G L Q+   ++ ++  GL  +A
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           +TY+ L+    ++     A  L+++++ +   P L +YN L+ GLCK  +       F D
Sbjct: 286 YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD 345

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +    F P++VS+N LL   C  G   EA  L  E+   D  PT++TYN LI  L   G 
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D AL++  EM      P   +Y  ++      G V +     ++M  +  KP+   YN 
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN- 464

Query: 384 LAMLCGVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
              + G  K+ +   AF++ + +           Y   + +LC++G   +A  LL  M  
Sbjct: 465 -TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIF-----------VV----------------- 472
            G  PD  TY+S+I G    G + +A E+F           VV                 
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583

Query: 473 -------MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
                  M E     +V  +NA++ GLC +RR D + + F  M EKG +PN+ +YTIL+ 
Sbjct: 584 AFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
              +    E +  + +E+  R++  +S    + ++
Sbjct: 644 ESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLK 678



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 166/357 (46%), Gaps = 1/357 (0%)

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           L   D++I+ GL+P+    + +L     E  +  A  +   +   G KP +V+YN +L  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CKEGR ++A+    ++  +G  PN V+YN+L+  L  +G  E+A  L+ EM     + +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
             TYN LI      G    A  +++EMV  R  P+ ++YN ++  LC   +V  V     
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            M   +  P+  ++N L    C  G + EAF +   L  +        Y  +I  LC  G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
               A +L  EMT  G  PD +TY+ L+ G    G +  A   F  M     KPD   +N
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             ++G  K   T ++  + + M+  G  P+  TY + V  +  Q   E + ++L+ +
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+SKG KPD       +    K      A  + E M+++G  PD  +Y   V+ LC++GN
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A  L+E M   G   + VTY S++ G    G+L ++ +  + ++ KG+ P+  TY+ 
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+ A   ++ +  A      ++ K    N+++YN ++ GLC   R +EA ++F ++  KG
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN  SY IL+   C  G WEEA  L  EM      P   T+++ + +L +     HA+
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL-HRDYQVHAV 689

Query: 329 KVLDEMVK 336
           + ++ +++
Sbjct: 690 QCVESLIQ 697



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 155/332 (46%), Gaps = 40/332 (12%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +++AFL  + +  +   P V+    L++ LC    +  A+++ + M   G+ PD  
Sbjct: 367 RTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIF 426

Query: 135 SYTYLVNCLCKKG-------------------------------------NVGYAMQLVE 157
           +YT LVN   K G                                     +V ++MQ  E
Sbjct: 427 TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQ--E 484

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           +M   G+P + +TYN  V  LC  GN  ++   L+ ++  GL+P+  TY+ ++    K  
Sbjct: 485 EMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            +  A ++ +++++KG  P++V+Y VL+     +   + A  +F  +  K    NV++YN
Sbjct: 545 HLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYN 604

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            ++  LCM  R +EA +   EM+     P   +Y ILI      G  + AL++  EM+  
Sbjct: 605 AIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           + +P + +++  +  L  + +V   V+C++ +
Sbjct: 665 KIQPDSFTHSVFLKNLHRDYQVH-AVQCVESL 695


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 225/427 (52%), Gaps = 11/427 (2%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M+ +G+ P+A  Y  L++CLCK G +  A   +++M  +  P N V+YN ++ G C   N
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAP-NVVSYNIIIDGYCKARN 59

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           + ++L FL  + + G  P    YS ++++  K   V  AM +  ++ AKG +P++V++NV
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           LL+GL +  +  EA   FR + S+G +P+VV+YN ++  LC   + +EA  LL  M   D
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
            SPT VTY  LI  L    +   A +V ++M +G    +  +Y+ +  +L   GK+    
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 364 KCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY-- 417
           +    M  +     + TY+    GL+ + G G V+ A  + + +G K   +P +FY Y  
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDG-GNVEAAKLVTEMMGKK--IAP-DFYAYSI 295

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  LC+  +  +A ++  EM   G +P   TY++L+ GL     +++A+E+   M +  
Sbjct: 296 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQG 355

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             PD  ++N ++ G C +  T+ +  +FQ MI+ G + N  TY  ++ G    +    + 
Sbjct: 356 RLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAW 415

Query: 538 EVLKELQ 544
            + K +Q
Sbjct: 416 MLFKRMQ 422



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 234/496 (47%), Gaps = 27/496 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M +KG +PD+V    LL  L +A K+ +A ++   M S G  PD  +Y  ++  LCK   
Sbjct: 105 MPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKK 164

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+ L+E+M+        VTY +L+  LC    L Q+ +  +++ +         YS 
Sbjct: 165 LDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSV 224

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGRTEEAIRFFRDLPSK 267
           L     +   +  A ++  D+  K       +Y++++ GL K +G   EA +   ++  K
Sbjct: 225 LFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGK 284

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              P+  +Y+IL+  LC   R  EA E+  EM G   SPT+VTYN L+  L    K   A
Sbjct: 285 KIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDA 344

Query: 328 LKVLDEMV-KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           +++   M+ +GR  P   SYN +I   C+ G  +        M       N  TYN   M
Sbjct: 345 MELTYFMLDQGRL-PDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYN--FM 401

Query: 387 LCGVGKVQEA------FAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMT 439
           + G  K +        F  +QS  N +  +P  F Y+ +I+SLC+  +  +AF+LL  M 
Sbjct: 402 IVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 461

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             GF P    +  L+  L   G +++A E++  M   + +  V + N LL G+ +    D
Sbjct: 462 DKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVD 521

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL----------QLRQVV 549
            + +  + M + G +P++ TY  LV G+  Q + + + ++++EL           LRQ++
Sbjct: 522 EAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLL 581

Query: 550 SESAVERLVMQYDFEG 565
                  L  Q DF+G
Sbjct: 582 GA-----LCAQGDFQG 592



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 223/514 (43%), Gaps = 63/514 (12%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL++A   LERM  +   P  V  T L+  LCK  ++++A +V E M          +Y+
Sbjct: 164 KLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYS 223

Query: 138 YLVNCL----------------CKK---------------------GNVGYAMQLVEKME 160
            L N L                C+K                     GNV  A +LV +M 
Sbjct: 224 VLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVE-AAKLVTEMM 282

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
                 +   Y+ L+ GLC      ++ +    +  +G+ P   TY+ LLE       + 
Sbjct: 283 GKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQ 342

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            AM+L   ++ +G  P+  SYN+++ G C  G T EA   F+D+   G   N  +YN ++
Sbjct: 343 DAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMI 402

Query: 281 RSLCMEGRWEEANELLAEMDGGDR----SPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
                +  W  A  L   M  G      +P + TY ILI SL    + + A K+L  M  
Sbjct: 403 VGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRD 462

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKV 393
             F PS   +  +++RL   G++D   +   +M    C+   G+ N   +L G+   G V
Sbjct: 463 KGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSN--ILLDGILRRGSV 520

Query: 394 QEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            EA   ++ + +     P +F Y  ++  LC +GK  QA +L+ E+ + G  P++     
Sbjct: 521 DEAKDFLKQMTD-TGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQ 579

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+  LC +G  + A E +  +     +  +   N L+   C +R+    L+   M+ ++ 
Sbjct: 580 LLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARK----LDYLDMIEQRE 635

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +P+     ++VE I      +  AE+ +E +++
Sbjct: 636 GVPD-----VIVERIE-----KFRAELFREEEVK 659



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 218/471 (46%), Gaps = 15/471 (3%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+VV    ++   CKA  ++KA+  +  M   G  P   +Y+ +V   CK GNV  AM +
Sbjct: 42  PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDV 101

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
             +M   G   + V +N L+ GL     ++++ +    +  +G  P+  TY+ ++    K
Sbjct: 102 FAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK 161

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL---PSKGFEPN 272
            + +  A+ LL+ +  +   P  V+Y  L+  LCK  R ++A   F  +   P    EP 
Sbjct: 162 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEP- 220

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA-YHGKTDHALKVL 331
             +Y++L   L   G+  EA+ + ++M   +   T  TY++++  L+   G    A K++
Sbjct: 221 --AYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLV 278

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGV 390
            EM+  +  P   +Y+ +I  LC   +     +   +M  R   P   TYN  L  L   
Sbjct: 279 TEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLST 338

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
            K+Q+A  +   + ++        Y  +I   C  G T +A+ L  +M K G   +++TY
Sbjct: 339 AKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTY 398

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYK----PDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           + +I G   +     A  +F  M+         P++  +  L+  LCK+ + + + ++  
Sbjct: 399 NFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLS 458

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ---LRQVVSESAV 554
            M +KG +P+   + +L+  +A    L+ + E+ KE+     +Q+V  S +
Sbjct: 459 AMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNI 509



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 8/217 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATN------LLYDLCKANKMKKAIKVMEMMVSSG 128
           +D   + A++  +RM S   K D V A N      L+  LCK +++++A K++  M   G
Sbjct: 407 KDEAWSSAWMLFKRMQS--GKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKG 464

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
            +P    +  L++ L + G +  A +L ++M          + N L+ G+   G+++++ 
Sbjct: 465 FVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAK 524

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
            FL ++   G+VP+ FTY  L+     +     A KL+++++  G +P       LL  L
Sbjct: 525 DFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGAL 584

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           C +G  + A  F+  LPS G E  +  +N L+ S C+
Sbjct: 585 CAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCL 621


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 209/440 (47%), Gaps = 2/440 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M +K   P V    +L+    K    ++A K+ +  V+  I  +  +Y  L++ LCK+G
Sbjct: 409 QMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEG 467

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A  L +KM D G     V+YNS++ G C  GNL+ +      ++  GL PN  TYS
Sbjct: 468 KMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYS 527

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++  +K      A  + D ++ +   P+  +YN+ + GLCK GRT EA    +    K
Sbjct: 528 ILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK 587

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF P  ++YN ++     EG    A     EM     SP ++TY  LI     +  TD A
Sbjct: 588 GFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
           LK+ +EM         A+Y  +I   C +  ++       ++      PN   YN L + 
Sbjct: 648 LKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISG 707

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
              +  ++ A  + + +  +  S   + Y  +I  L ++G+   A  L  EM+  G  PD
Sbjct: 708 YRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPD 767

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
              Y+ LI GLC +G +E A +I   ME     P+V  +NAL+ G  K+     +  +  
Sbjct: 768 IIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHN 827

Query: 507 MMIEKGQMPNETTYTILVEG 526
            M++KG  PN+TTY IL+ G
Sbjct: 828 EMLDKGLTPNDTTYDILING 847



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 214/459 (46%), Gaps = 2/459 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + MVS G + +VV AT L+   CK +K+  A++  + M  +G  P+  +Y  L+   CK 
Sbjct: 338 DEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKN 397

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           GN+  A  L  +M++          NSL+RG   + +  ++ +  D  +    + N FTY
Sbjct: 398 GNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD-IANIFTY 456

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + LL    KE  +  A  L   ++ KG  P  VSYN ++ G C++G  + A   F D+  
Sbjct: 457 NSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLD 516

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G +PNV++Y+IL+      G  E A  +   M   +  P+  TYNI I  L   G+T  
Sbjct: 517 CGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSE 576

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A  +L + V+  F P   +YN I+     EG V   +    +M      PN  TY  L  
Sbjct: 577 AQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLIN 636

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C       A  +   + NK        Y  +I   C+K     A  L  E+   G +P
Sbjct: 637 GFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSP 696

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +S  Y+SLI G      +E AL +   M       D+  +  L+ GL K  R  L+L+++
Sbjct: 697 NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             M  KG +P+   YT+L+ G+  + +LE + ++L E++
Sbjct: 757 SEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEME 795



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 219/461 (47%), Gaps = 8/461 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E+MV KG   D      ++    K N  ++A K      S G+  DA++Y+ ++   CK 
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKN 292

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            +V  A  L++ M D G+  +  T+ S++      GN+ ++L+  D ++  G+  N    
Sbjct: 293 LDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVA 352

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L++   K+  + +A++  D +   G  PN V+Y VL+   CK G   +A   +  + +
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN 412

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           K   P V   N L+R        EEA++L  E    D +  I TYN L+  L   GK   
Sbjct: 413 KNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSE 471

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A  +  +M+     P+  SYN +I   C +G +D+       M     KPN  TY+   +
Sbjct: 472 ATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYS--IL 529

Query: 387 LCGV---GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           + G    G  + AF +   + + +N  P +F Y   I  LC+ G+T +A  +L +  + G
Sbjct: 530 MDGYFKNGDTEYAFYVFDRMVD-ENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKG 588

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           F P   TY+S++ G   EG +  AL  +  M E    P+V  +  L+ G CK+  TDL+L
Sbjct: 589 FVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLAL 648

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           ++   M  KG   +   Y  L++G   + ++E ++ +  EL
Sbjct: 649 KMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSEL 689



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 213/467 (45%), Gaps = 2/467 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M  KG  P     T+++    K   M +A+++ + MVS G+  +    T LV   CK
Sbjct: 302 LKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCK 361

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +  +  A++  +KM + G   N VTY  L+   C  GN+ ++     ++  K + P  F 
Sbjct: 362 QDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFI 421

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            + L+    K      A KL D+ +A     N+ +YN LL+ LCKEG+  EA   ++ + 
Sbjct: 422 VNSLIRGFLKVESREEASKLFDEAVA-CDIANIFTYNSLLSWLCKEGKMSEATTLWQKML 480

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P  VSYN ++   C +G  + A  + ++M      P ++TY+IL+     +G T+
Sbjct: 481 DKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTE 540

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           +A  V D MV     PS  +YN  I  LC  G+       L +   +   P   TYN + 
Sbjct: 541 YAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIM 600

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                 G V  A    + +     S     Y  +I   C+   T  A ++  EM   G  
Sbjct: 601 DGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLE 660

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            D   Y +LI G C +  IE A  +F  + +    P+   +N+L+ G       + +L +
Sbjct: 661 LDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNL 720

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            + M+ +G   +  TYT L++G+  +  L L+ ++  E+  + ++ +
Sbjct: 721 QKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPD 767



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 208/446 (46%), Gaps = 10/446 (2%)

Query: 21  KAYGFYSQIPNLHSF-------SLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNN--D 71
           KAY  Y+Q+ N +         SL +GF++V +  + +    ++V          N+   
Sbjct: 402 KAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLS 461

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
              ++ K+++A    ++M+ KG  P  V   +++   C+   +  A  V   M+  G+ P
Sbjct: 462 WLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKP 521

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  +Y+ L++   K G+  YA  + ++M D     +  TYN  + GLC +G  +++   L
Sbjct: 522 NVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDML 581

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
            + ++KG VP   TY+ +++   KE  V +A+    ++   G  PN+++Y  L+ G CK 
Sbjct: 582 KKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKN 641

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
             T+ A++   ++ +KG E ++ +Y  L+   C +   E A+ L +E+  G  SP  V Y
Sbjct: 642 NNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIY 701

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N LI         + AL +   M+         +Y  +I  L  EG++ L +    +M  
Sbjct: 702 NSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSA 761

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +   P+   Y  L   LCG G+++ A  I+  +     +     Y  +I    + G   +
Sbjct: 762 KGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQE 821

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRG 456
           AF+L  EM   G TP+  TY  LI G
Sbjct: 822 AFRLHNEMLDKGLTPNDTTYDILING 847



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 187/392 (47%), Gaps = 8/392 (2%)

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           + + ++   YN L+        LN ++   +RL++  +VP     +FLL A  K   ++ 
Sbjct: 168 FDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYE 227

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A ++ + ++ KG   +  + ++++    K+   EEA +FF +  S+G + +  +Y+I+++
Sbjct: 228 AREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQ 287

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           + C     E A  LL +M      P+  T+  +IG+    G    AL++ DEMV    + 
Sbjct: 288 AFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQM 347

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAII 400
           +      ++   C + K+   ++  D+M      PN  TY  L    C  G + +A+ + 
Sbjct: 348 NVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLY 407

Query: 401 QSLGNKQNSSPQEFYKYVITSLCR---KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
             + NK N  P  F   ++ SL R   K ++ +    L++        + +TY+SL+  L
Sbjct: 408 TQMKNK-NICPTVF---IVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWL 463

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C EG + EA  ++  M +    P   ++N+++LG C+    D++  VF  M++ G  PN 
Sbjct: 464 CKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNV 523

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            TY+IL++G     + E +  V   +    +V
Sbjct: 524 ITYSILMDGYFKNGDTEYAFYVFDRMVDENIV 555



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 3/175 (1%)

Query: 62  PNRKPGNNNDTRHRDHKLNDAFLQLE-RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PN    N+  + +R+    +A L L+ RM+ +G   D+   T L+  L K  ++  A+ +
Sbjct: 696 PNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDL 755

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
              M + GIIPD   YT L+N LC KG +  A +++ +ME      N   YN+L+ G   
Sbjct: 756 YSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFK 815

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
            GNL ++ +  + ++ KGL PN  TY  L+    K +G ++A+K L  +  K GK
Sbjct: 816 AGNLQEAFRLHNEMLDKGLTPNDTTYDILING--KIKGGNSALKSLLSLKFKDGK 868



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 87/180 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   +  A      ++  G  P+ V   +L+      N M+ A+ + + M+  GI  D  
Sbjct: 675 KKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQ 734

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++ L K+G +  A+ L  +M   G   + + Y  L+ GLC  G L  + + L  +
Sbjct: 735 TYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEM 794

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +  + PN   Y+ L+   +K   +  A +L ++++ KG  PN  +Y++L+ G  K G +
Sbjct: 795 ERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNS 854


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 212/411 (51%), Gaps = 3/411 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A   L+ MV++G +P+    T+++  LC   ++  A+ V+E MV   +I D + YT
Sbjct: 309 ELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYT 368

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  C KG++  A +  ++M+  G  T+ VTY +L+ GLC  G L ++ + L  ++ +
Sbjct: 369 TVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLAR 428

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L  +  TY+ L++   K   +  A ++ + ++ +G  PN+V+Y  L  GLCK+G  + A
Sbjct: 429 RLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAA 488

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ +KG E N  +YN L+  LC  G  ++A   +A+MD     P + TY  LI +
Sbjct: 489 NELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDA 548

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D A  +L EM+    +P+  +YN ++   C  G+V+   K L+ M  +   PN
Sbjct: 549 LCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPN 608

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLY 436
             TYN L     +G   ++   I      +N  P E  Y  +I   C+     +A     
Sbjct: 609 ATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHN 668

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM--EEYDYKPDVDNF 485
           EM + GF   + +YS+LIR L  +    EA ++F  M  E +  +PDV NF
Sbjct: 669 EMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 226/486 (46%), Gaps = 37/486 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    + M S    PDVV    L++  C   +++ A+K+++ MV+ G+ P+A+ YT
Sbjct: 277 RVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYT 333

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V  LC KG V  A+ +VE M  +    +   Y +++ G C  G+L  + ++ D + +K
Sbjct: 334 SVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRK 393

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +  TY+ L+    +   +  A K+L +++A+    + V+Y VL+ G CK G+  EA
Sbjct: 394 GLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEA 453

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +    +  +G  PNVV+Y  L   LC +G  + ANELL EM          TYN LI  
Sbjct: 454 FQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 513

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  D A++ + +M     +P   +Y  +I  LC  G++D     L +M     KP 
Sbjct: 514 LCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPT 573

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  +   C  G+     +LL  
Sbjct: 574 IVTYNVL----------------------------------MNGFCMSGRVEGGKKLLEW 599

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M +    P++ TY+SL++  C+   ++   EI+  M   + +P+ + +N L+ G CK+R 
Sbjct: 600 MLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARS 659

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +      MIEKG     ++Y+ L+  +  + +   + ++  +++     +E  V   
Sbjct: 660 MKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719

Query: 558 VMQYDF 563
            + ++F
Sbjct: 720 YIDFNF 725



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 194/400 (48%), Gaps = 6/400 (1%)

Query: 130 IPDAS--SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           +PD +  SY  L+  LC  G V  A QL ++M     P + VTY  L+ G C LG L  +
Sbjct: 257 LPDKNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENA 313

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           ++ LD ++ +G+ PNA  Y+ ++     +  V  A+ +++D++      +   Y  +L+G
Sbjct: 314 VKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSG 373

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            C +G    A R+F ++  KG   + V+Y  L+  LC  G  +EA ++L EM        
Sbjct: 374 FCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVD 433

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            VTY +L+      GK   A +V + MV+    P+  +Y  +   LC +G V    + L 
Sbjct: 434 EVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLH 493

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M ++  + N  TYN L   LC  G + +A   +  +           Y  +I +LC+ G
Sbjct: 494 EMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSG 553

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  LL EM   G  P   TY+ L+ G CM G +E   ++   M E +  P+   +N
Sbjct: 554 ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN 613

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           +L+   C       + E+++ M  +   PNE TY IL++G
Sbjct: 614 SLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG 653



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 151/284 (53%), Gaps = 1/284 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L +A   L+ M+++    D V  T L+   CK  KM +A +V   MV  G+ P+  
Sbjct: 411 RAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVV 470

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L + LCK+G+V  A +L+ +M + G   N  TYNSL+ GLC  G L+Q+++ +  +
Sbjct: 471 TYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM 530

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GL P+ +TY+ L++A  K   +  A  LL +++  G KP +V+YNVL+ G C  GR 
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E   +    +  K   PN  +YN L++  C+    +   E+   M   +  P   TYNIL
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNIL 650

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           I           A    +EM++  FR +A+SY+ +I RL ++ K
Sbjct: 651 IKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI-RLLNKKK 693



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 172/355 (48%), Gaps = 47/355 (13%)

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           LL  +   G  P+  + N +L+ L      +EAI  F+ LP K    NV SYNILL+ LC
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLKVLC 273

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             GR E+A +L  EM      P +VTY ILI      G+ ++A+K+LD+MV     P+A 
Sbjct: 274 GAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNAT 330

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN---------------------- 382
            Y  ++A LC +G+V   +  ++ M H +   +E  Y                       
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 383 ---GLAM-----------LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
              GLA            LC  G+++EA  ++Q +  ++    +  Y  ++   C++GK 
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +AFQ+   M + G  P+  TY++L  GLC +G ++ A E+   M     + +   +N+L
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 510

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + GLCK+   D ++     M   G  P+  TYT L++ +    EL+ + ++L+E+
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 222/458 (48%), Gaps = 4/458 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M+ +G   +V     LL  LC+  +  KA+ ++  M  + ++PD  SY  ++   C+
Sbjct: 130 LALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCE 189

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A+QL  +M+  G   + VT+  L+   C  G +++++  L  +  KGL  +   
Sbjct: 190 GKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIV 249

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+        +     L D+++ +G  P  ++YN L+ G CK GR +EA   F  + 
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMM 309

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G  PNV +Y  L+  LC  G+ +EA +LL  M   D  P +VTYNI+I  L       
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVA 369

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR--CKPNEGTYNG 383
            AL++++ M K R RP   +YN ++  LC++G +D   K L  M        P+  ++N 
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L   LC   ++ +A  I   L  K  +        ++ S  + G   +A +L  +++   
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             P+S TY+++I G C  G++  A  +   M   +  P V ++N LL  LCK    D + 
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            +F+ M      P+  ++ I+++G     +++ SAE L
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIK-SAESL 586



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 218/453 (48%), Gaps = 3/453 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +   A   L  M      PDVV    ++   C+  +++KA+++   M  SG      
Sbjct: 154 RNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLV 213

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++  CK G +  AM L+++M+  G   + + Y SL+RG C  G L++     D +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G  P A TY+ L+    K   +  A ++ + ++ +G +PN+ +Y  L+ GLC  G+T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA++    +  K  EPNVV+YNI++  LC +    +A E++  M      P  +TYN L
Sbjct: 334 KEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSL 393

Query: 315 IGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +G L   G  D A K+L  M+K      P   S+N +I  LC   ++   +   D +  +
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEK 453

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
               +  T N L       G V +A  + + + N +     + Y  +I   C+ G    A
Sbjct: 454 LGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVA 513

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             LL +M      P  + Y+ L+  LC +G +++A  +F  M+  D  PDV +FN ++ G
Sbjct: 514 KGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDG 573

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
             K+     +  +   M   G  P+  TY+ L+
Sbjct: 574 SLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLI 606



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 225/452 (49%), Gaps = 5/452 (1%)

Query: 101 ATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
             NL+  L ++   + A      M+ +    +  S + L+ C  +    G+A  ++  M 
Sbjct: 75  GNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALML 134

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
             G+  N   YN L++GLC      +++  L  + Q  L+P+  +Y+ ++    + + + 
Sbjct: 135 KRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELE 194

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A++L +++   G   +LV++ +L+   CK G+ +EA+   +++  KG E +++ Y  L+
Sbjct: 195 KALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLI 254

Query: 281 RSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           R  C  G  +    L  E ++ GD SP  +TYN LI      G+   A ++ + M++   
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGD-SPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGV 313

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
           RP+  +Y  +I  LC  GK    ++ L+ M  +  +PN  TYN +   LC    V +A  
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALE 373

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK-YGFT-PDSYTYSSLIRG 456
           I++ +  ++       Y  ++  LC KG   +A +LLY M K   +T PD  ++++LI G
Sbjct: 374 IVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHG 433

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           LC    + +AL+I+ ++ E     D+   N LL    KS   + ++E+++ +     +PN
Sbjct: 434 LCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPN 493

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             TYT +++G      L ++  +L +++L ++
Sbjct: 494 SDTYTTMIDGFCKTGMLNVAKGLLCKMRLSEL 525



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 200/419 (47%), Gaps = 38/419 (9%)

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N+L+  L    N   +  F  ++++     N  + S LLE   + R    A  +L  ++ 
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G   N+ +YN+LL GLC+     +A+   R++      P+VVSYN ++R  C     E+
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV---------------- 335
           A +L  EM G   S ++VT+ ILI +    GK D A+ +L EM                 
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255

Query: 336 -----------KGRF--------RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                      K  F         P A +YN +I   C  G++    +  + M  R  +P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRP 315

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TY GL   LCGVGK +EA  ++  +  K        Y  +I  LC+      A +++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV 375

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE-IFVVMEEYDY-KPDVDNFNALLLGLC 493
             M K    PD+ TY+SL+ GLC +G ++EA + +++++++  Y  PDV +FNAL+ GLC
Sbjct: 376 ELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLC 435

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           K  R   +L+++ +++EK    +  T  IL+       ++  + E+ K++   ++V  S
Sbjct: 436 KGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 199/420 (47%), Gaps = 46/420 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A   L+ M  KG + D++  T+L+   C   ++ +   + + ++  G  P A +Y 
Sbjct: 227 KMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK G +  A ++ E M + G   N  TY  L+ GLC +G   ++LQ L+ ++QK
Sbjct: 287 TLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQK 346

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  TY+ ++    K+  V  A+++++ +  +  +P+ ++YN LL GLC +G  +EA
Sbjct: 347 DEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEA 406

Query: 258 IRFFRDL--PSKGFEPNVVSYNILLRSLCMEGRWEEA----NELLAEMDGGDRSPTIVTY 311
            +    +   S   +P+V+S+N L+  LC   R  +A    + L+ ++  GD    IVT 
Sbjct: 407 SKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGD----IVTT 462

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NIL+ S    G  + A+++  ++   +  P++ +Y  +I   C  G +++    L +M  
Sbjct: 463 NILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRL 522

Query: 372 RRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSL----------------------GNKQN 408
               P+   YN L + LC  G + +A+ + + +                      G+ ++
Sbjct: 523 SELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKS 582

Query: 409 S------------SPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           +            SP  F Y  +I    + G   +A     +M   GF PD++   S+++
Sbjct: 583 AESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLK 642



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 161/349 (46%), Gaps = 3/349 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  +A   L  M+ K  +P+VV    ++  LCK + +  A++++E+M      PD  +Y 
Sbjct: 332 KTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYN 391

Query: 138 YLVNCLCKKGNVGYAMQLVEKM-EDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            L+  LC KG++  A +L+  M +D  Y   + +++N+L+ GLC    L+Q+L   D L+
Sbjct: 392 SLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLV 451

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K    +  T + LL +  K   V+ AM+L   I      PN  +Y  ++ G CK G   
Sbjct: 452 EKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLN 511

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A      +      P+V  YN LL SLC +G  ++A  L  EM   D  P ++++NI+I
Sbjct: 512 VAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMI 571

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G    A  +L  M      P   +Y+ +I R    G +D  +   D+M     +
Sbjct: 572 DGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFE 631

Query: 376 PNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
           P+    + +   C   G+  +    ++ L +K     +E    V+  +C
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMC 680


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 205/394 (52%), Gaps = 4/394 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +++  G +PD+   T+L+   C  N++++A+ ++  MV  GI PD   YT +++ LCK
Sbjct: 129 LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCK 188

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G+V  A+ L  +ME+YG   + V Y SLV GLC  G    +   L  ++++ + P+  T
Sbjct: 189 NGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT 248

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L++A  KE  +  A +L +++I     PN+ +Y  L+ GLC EGR +EA + F  + 
Sbjct: 249 FNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLME 308

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +KG  P+VV+Y  L+   C   + E+A ++  EM     +   +TY  LI      GK +
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK---PNEGTYN 382
            A +V   MV     P+  +YN ++  LC  GKV+  +   + M  R      PN  TYN
Sbjct: 369 VAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYN 428

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC  GK+++A  +   +  +        Y  +I  +C+ GK   A  L   +   
Sbjct: 429 VLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSK 488

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           G  P+  TY+++I GL  EGL+ EA  +F  M+E
Sbjct: 489 GVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKE 522



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 226/471 (47%), Gaps = 13/471 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + N+A      MV     P ++  T LL  + K  K    I + + +   G+  D  +  
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+NC C+      A   + K+   G+  +  T+ SL+ G C+   + +++  ++++++ 
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   Y+ ++++  K   V  A+ L + +   G +P++V Y  L+ GLC  GR  +A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               R +  +  +P+V+++N L+ +   EG+  +A EL  EM     +P I TY  LI  
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290

Query: 318 LAYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           L   G+ D A ++   M  KG F P   +Y  +I   C   KV+  +K   +M  +    
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG 349

Query: 377 NEGTYNGLAMLCG-VGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           N  TY  L    G VGK    QE F  + S G   N      Y  ++  LC  GK  +A 
Sbjct: 350 NTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRT---YNVLLHCLCYNGKVNKAL 406

Query: 433 QLLYEMTKY---GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            +  +M K    G  P+  TY+ L+ GLC  G +E+AL +F  M++ D    +  +  ++
Sbjct: 407 MIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIII 466

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            G+CK+ +   +L +F  +  KG  PN  TYT ++ G+  ++ L L A VL
Sbjct: 467 QGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGL-FREGLMLEAHVL 516



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 203/439 (46%), Gaps = 37/439 (8%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           +  +A+ +   MV S  +P    +T L+N + K       + L + ++  G   +  T N
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            L+   C       +  FL +L++ G  P+ FT++ L+        +  AM +++ ++  
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KP++V Y  ++  LCK G  + A+  F  + + G  P+VV Y  L+  LC  GRW +A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
           + LL  M      P ++T+N LI +    GK   A ++ +EM++    P+  +Y  +I  
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           LC EG++D   +    M  + C P+   Y  L                            
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSL---------------------------- 322

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                 I   C+  K   A ++ YEM++ G T ++ TY++LI+G  + G    A E+F  
Sbjct: 323 ------INGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK---GQMPNETTYTILVEGIAH 529
           M      P++  +N LL  LC + + + +L +F+ M ++   G  PN  TY +L+ G+ +
Sbjct: 377 MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436

Query: 530 QDELELSAEVLKELQLRQV 548
             +LE +  V  ++Q R +
Sbjct: 437 NGKLEKALMVFGDMQKRDM 455



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 179/403 (44%), Gaps = 34/403 (8%)

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KGN G A+     +    +      Y  ++R        N++L     +++   +P+   
Sbjct: 14  KGNSGKALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIID 73

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ LL    K +     + L   +   G   +L + N+L+   C+  +   A  F   L 
Sbjct: 74  FTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLM 133

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             GFEP++ ++  L+   C+  R EEA  ++ +M      P +V Y  +I SL  +G  D
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVD 193

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           +AL + ++M     RP    Y  ++  LC+ G+       L  M  R+ KP+  T+N L 
Sbjct: 194 NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL- 252

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
                                            I +  ++GK   A +L  EM +    P
Sbjct: 253 ---------------------------------IDAFVKEGKLLDAKELYNEMIQMSIAP 279

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           + +TY+SLI GLCMEG ++EA ++F +ME     PDV  + +L+ G CK ++ + ++++F
Sbjct: 280 NIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIF 339

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             M +KG   N  TYT L++G     +  ++ EV   +  R V
Sbjct: 340 YEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGV 382



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 156/316 (49%), Gaps = 7/316 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++  +++A     +M + G +PDVV  T+L+  LC + + + A  ++  M+   I 
Sbjct: 184 DSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIK 243

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  L++   K+G +  A +L  +M       N  TY SL+ GLCM G L+++ Q 
Sbjct: 244 PDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG  P+   Y+ L+    K + V  AMK+  ++  KG   N ++Y  L+ G   
Sbjct: 304 FYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGL 363

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-----DGGDRS 305
            G+   A   F  + S+G  PN+ +YN+LL  LC  G+  +A  +  +M     DG    
Sbjct: 364 VGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDG--VP 421

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P I TYN+L+  L Y+GK + AL V  +M K        +Y  II  +C  GKV   +  
Sbjct: 422 PNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNL 481

Query: 366 LDQMFHRRCKPNEGTY 381
              +  +  KPN  TY
Sbjct: 482 FCSLPSKGVKPNVVTY 497


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 232/453 (51%), Gaps = 3/453 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H L  +F  L  +  K   P ++Q   +L  L KAN     + +   M  +GI  +  + 
Sbjct: 50  HNLVSSFNHL--LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTL 107

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           + L+NC  + G+   +  +   +   GY  + +T  +L++GLC+ G+++++L F D+++ 
Sbjct: 108 SILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLA 167

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G   N  +Y  L+    K     AA+++L  I  K  + ++V YN ++ G+CK+    +
Sbjct: 168 LGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVND 227

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A  F+ ++ +K   P VV+YN L+  LC+ G+ ++A  LL +M   + +PT+ T++IL+ 
Sbjct: 228 AFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVD 287

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +    GK   A  V   M+K   +P+  +YN ++   C   +V+      + M      P
Sbjct: 288 AFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAP 347

Query: 377 NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  +Y+  ++  C +  V EA  + + +  KQ       Y  +I  LC+ G+   A +L+
Sbjct: 348 DVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLI 407

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G  P+  TY+SL+  LC    +++A+E+   +++++ +P V  +N L+ GLCKS
Sbjct: 408 GEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKS 467

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
            R   + +VF+ ++  G   +  TY  +++G  
Sbjct: 468 GRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFC 500



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 202/414 (48%), Gaps = 1/414 (0%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +  ++  L K  +    + L  +ME  G  +N VT + L+     LG+ + S   
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +++KG  P+A T + L++    +  +H A+   D ++A G + N VSY  L+ GLCK
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+T+ A+   R +  K    +VV YN ++  +C +    +A +  +EM      PT+VT
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  L   G+   A+ +L +M+     P+  +++ ++   C EGKV         M 
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +  KPN  TYN L    C V +V +A +I  ++     +     Y  +I+  C+     
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVD 366

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A +L  EM      PD  TY+SLI GLC  G I  AL++   M +    P++  +N+LL
Sbjct: 367 EAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLL 426

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             LCK+   D ++E+   + +    P+  TY IL+ G+     L+ + +V +++
Sbjct: 427 DALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDV 480



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 192/379 (50%), Gaps = 1/379 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           +  V   ++  G  PDA + T L+  LC KG++  A+   +K+   G+  N V+Y +L+ 
Sbjct: 123 SFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLIN 182

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           GLC +G    +L+ L R+  K +  +   Y+ +++   K++ V+ A     +++AK   P
Sbjct: 183 GLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICP 242

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            +V+YN L+ GLC  G+ ++AI     +  +   P V +++IL+ + C EG+ +EA  + 
Sbjct: 243 TVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVF 302

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
             M   D  P IVTYN L+       + + A  + + M +    P   SY+ +I+  C  
Sbjct: 303 VVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKI 362

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
             VD  +K  ++M  ++  P+  TYN L   LC  G++  A  +I  + ++        Y
Sbjct: 363 KMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITY 422

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             ++ +LC+     +A +LL ++  +   P   TY+ LI GLC  G +++A ++F  +  
Sbjct: 423 NSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLV 482

Query: 476 YDYKPDVDNFNALLLGLCK 494
             Y  DV  +N ++ G CK
Sbjct: 483 NGYNIDVYTYNTMIKGFCK 501



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 189/383 (49%), Gaps = 1/383 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +F     ++ KG++PD +  T L+  LC    + KA+   + +++ G   +  SY  L+N
Sbjct: 123 SFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLIN 182

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G    A++++ +++      + V YN+++ G+C    +N +  F   ++ K + P
Sbjct: 183 GLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICP 242

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
              TY+ L+        +  A+ LL  +I +   P + ++++L+   CKEG+ +EA   F
Sbjct: 243 TVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVF 302

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  K  +PN+V+YN L+   C+     +A  +   M     +P + +Y+I+I      
Sbjct: 303 VVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKI 362

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
              D A+K+ +EM   +  P   +YN +I  LC  G++   +K + +M  R   PN  TY
Sbjct: 363 KMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITY 422

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N L   LC    V +A  ++  L +         Y  +I  LC+ G+   A ++  ++  
Sbjct: 423 NSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLV 482

Query: 441 YGFTPDSYTYSSLIRGLCMEGLI 463
            G+  D YTY+++I+G C +G +
Sbjct: 483 NGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 154/285 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  +NDAF     MV+K   P VV    L+  LC   ++K AI ++  M+   I P   
Sbjct: 221 KDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVY 280

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +++ LV+  CK+G V  A  +   M       N VTYNSL+ G C++  +N++    + +
Sbjct: 281 TFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTM 340

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q G+ P+  +YS ++    K + V  AMKL +++  K   P++V+YN L+ GLCK GR 
Sbjct: 341 AQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRI 400

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A++   ++  +G  PN+++YN LL +LC     ++A ELL ++   +  P++ TYNIL
Sbjct: 401 SYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNIL 460

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           I  L   G+   A KV ++++   +     +YN +I   C +G V
Sbjct: 461 INGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 182/394 (46%), Gaps = 11/394 (2%)

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L+     Y   +N+ T  S       L NL  S   L  L QK   P+   +  +L +  
Sbjct: 29  LIHCFTSYSSFSNSTTLYS------QLHNLVSSFNHL--LHQKNPTPSIIQFGKILGSLV 80

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K       + L   +   G   NLV+ ++L+    + G    +   F ++  KG+EP+ +
Sbjct: 81  KANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAI 140

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +   L++ LC++G   +A     ++         V+Y  LI  L   G+T  AL++L  +
Sbjct: 141 TLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRI 200

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
                R     YN II  +C +  V+       +M  +R  P   TYN L   LC +G++
Sbjct: 201 DGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQL 260

Query: 394 QEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++A  ++  +   +N +P  + +  ++ + C++GK  +A  +   M K    P+  TY+S
Sbjct: 261 KDAIGLLHKMI-LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNS 319

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ G C+   + +A  IF  M +    PDV +++ ++ G CK +  D ++++F+ M  K 
Sbjct: 320 LMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQ 379

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             P+  TY  L++G+     +  + +++ E+  R
Sbjct: 380 IFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDR 413



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 40/79 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H ++ A   L ++     +P V     L+  LCK+ ++K A KV E ++ +G  
Sbjct: 427 DALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYN 486

Query: 131 PDASSYTYLVNCLCKKGNV 149
            D  +Y  ++   CKKG V
Sbjct: 487 IDVYTYNTMIKGFCKKGFV 505


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 230/511 (45%), Gaps = 52/511 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ DA    + M+  G K ++    +L+   CK  ++ +  +++  M    + PD+ SY 
Sbjct: 187 KMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYC 246

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV+  C+ G    A  + ++M   G     VTYN+L++GLC  G+   +L+    ++Q+
Sbjct: 247 TLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQR 306

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN   Y  LL+  +K      A+ L DDI+A+G   ++ ++N ++ GLCK G  + A
Sbjct: 307 GVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGA 366

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN------------------------ 293
              F+ +   G +P+ ++Y  L    C  G  EEA                         
Sbjct: 367 KETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVG 426

Query: 294 -----------ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
                      +LLAEMD    SP +VTY  LI      G+ D A     EM+   F P+
Sbjct: 427 LFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPN 486

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQM------FHRRCKPNEGTYNGLAMLCG-VGKVQE 395
               + I++ L   G++D     L +M         RC  +    +   + C  +    +
Sbjct: 487 VIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLD 546

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
             AI  SL N         Y   +  LC+ GK   A +    ++   FTPD++TY +LI 
Sbjct: 547 ESAIKFSLPN------NVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIH 600

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G    G + EA  +   M      P++  +NALL GLCKS   D +  +F  +  KG +P
Sbjct: 601 GFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIP 660

Query: 516 NETTYTILVEGIAH----QDELELSAEVLKE 542
           N  TY IL++G       ++ L+L  ++LKE
Sbjct: 661 NVVTYNILIDGYCKSGSPREALDLRGKMLKE 691



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 232/488 (47%), Gaps = 19/488 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   RD   + AF   ++M+ KG +P VV    LL  LC+    K A+++  +M+  G+ 
Sbjct: 250 DGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVT 309

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  L++ L K G+   A+ L + +   G   +   +N+++ GLC +G ++ + + 
Sbjct: 310 PNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKET 369

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ + G  P+  TY  L +   K   V  A K+ + +  +   P++  YN L+ GL  
Sbjct: 370 FKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFT 429

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             +  + I    ++ ++G  PNVV+Y  L+   C +GR ++A     EM G   +P ++ 
Sbjct: 430 SKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVII 489

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG-------KVDL-- 361
            + ++ SL   G+ D A  +L +MV          ++ ++   C E        K+D   
Sbjct: 490 CSKIVSSLYRLGRIDEANMLLQKMV---------DFDLVLDHRCLEDFQNADIRKLDCWK 540

Query: 362 VVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           +   LD+   +   PN   YN  +A LC  GKV +A      L +   +     Y  +I 
Sbjct: 541 IADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIH 600

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
                G   +AF L  EM   G  P+  TY++L+ GLC  G ++ A  +F  +      P
Sbjct: 601 GFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIP 660

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +V  +N L+ G CKS     +L++   M+++G  P+  TY+ L+ G   Q ++E + ++L
Sbjct: 661 NVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLL 720

Query: 541 KELQLRQV 548
            E++   V
Sbjct: 721 NEMKASNV 728



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 2/458 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + +A    + M   G KP +    +LL +L K  +   A+ V + M    I+PD  +   
Sbjct: 12  VKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAI 71

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +VN  CK G V  A++ V +ME  G+  N V+YNSLV G   LG++  +   L  + +KG
Sbjct: 72  MVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG 131

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEA 257
           ++ N  T + L++   K+  V  A K+L ++  + G   +  +Y  L+ G CK G+  +A
Sbjct: 132 VMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDA 191

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           IR   ++   G + N+   N L+   C  G+  E   LL  M   D  P   +Y  L+  
Sbjct: 192 IRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDG 251

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G +  A  V D+M++    P+  +YN ++  LC  G     ++    M  R   PN
Sbjct: 252 YCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPN 311

Query: 378 E-GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           E G    L  L  +G    A  +   +  +  +     +  +I  LC+ G+   A +   
Sbjct: 312 EVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFK 371

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M + G  PD  TY +L  G C  G +EEA +I   ME+ +  P ++ +N+L++GL  S+
Sbjct: 372 RMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSK 431

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +    +++   M  +G  PN  TY  L+ G   Q  L+
Sbjct: 432 KISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLD 469



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 201/420 (47%), Gaps = 2/420 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G + + V   +L+        ++ A  V++ M   G++ +  + T L+   CK+  V  A
Sbjct: 96  GFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEA 155

Query: 153 MQLVEKME-DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
            +++ +ME + G   +   Y +L+ G C +G +  +++  D +++ GL  N F  + L+ 
Sbjct: 156 EKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLIN 215

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K   VH   +LL  +     KP+  SY  L+ G C++G + +A      +  KG EP
Sbjct: 216 GYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEP 275

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
            VV+YN LL+ LC  G +++A  L   M     +P  V Y  L+  L   G    AL + 
Sbjct: 276 TVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLW 335

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGV 390
           D+++      S  ++N +I  LC  G++D   +   +M    CKP+  TY  L+   C V
Sbjct: 336 DDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKV 395

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V+EAF I + +  ++     E Y  +I  L    K  +   LL EM   G +P+  TY
Sbjct: 396 GNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTY 455

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            +LI G C +G +++A   +  M    + P+V   + ++  L +  R D +  + Q M++
Sbjct: 456 GALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVD 515



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 4/303 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L+ AF     M+ KG  P+V+  + ++  L +  ++ +A  +++ MV   ++ D     
Sbjct: 467 RLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLE 526

Query: 138 YLVNCLCKKGNVG-YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              N   +K +    A  L E    +  P N V YN  + GLC  G +N + +F   L  
Sbjct: 527 DFQNADIRKLDCWKIADTLDESAIKFSLPNNVV-YNIAMAGLCKSGKVNDARRFFLGLSH 585

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
               P+ FTY  L+        V+ A  L D+++ KG  PN+ +YN LL GLCK G  + 
Sbjct: 586 GSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDR 645

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A R F  L  KG  PNVV+YNIL+   C  G   EA +L  +M     SP+I+TY+ LI 
Sbjct: 646 ARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLIN 705

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                   + A+K+L+EM       + A+++ ++      G V  + K L  M H  C P
Sbjct: 706 GFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSK-LHNMMHMAC-P 763

Query: 377 NEG 379
           + G
Sbjct: 764 SAG 766



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 177/394 (44%), Gaps = 6/394 (1%)

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           +KG V  A+ + + M  YG   +  + NSL+  L   G    ++   D++ +  +VP+ F
Sbjct: 8   EKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVF 67

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T + ++ A  K   V  A++ + ++   G + N VSYN L+ G    G  E A    + +
Sbjct: 68  TCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM 127

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV---TYNILIGSLAYH 321
             KG   N V+  +L++  C + + EEA ++L EM+  D    +V    Y  LI      
Sbjct: 128 SEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKED--GVVVDEYAYGALIDGYCKV 185

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           GK   A++V DEM+K   + +    N +I   C  G+V    + L  M     KP+  +Y
Sbjct: 186 GKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSY 245

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L    C  G   +AF +   +  K        Y  ++  LCR G    A +L + M +
Sbjct: 246 CTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQ 305

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G TP+   Y +L+ GL   G    AL ++  +        +  FN ++ GLCK    D 
Sbjct: 306 RGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDG 365

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           + E F+ M E G  P+  TY  L +G      +E
Sbjct: 366 AKETFKRMEELGCKPDGITYRTLSDGYCKVGNVE 399



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 145/373 (38%), Gaps = 70/373 (18%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            +RM   G KPD +    L    CK   +++A K+ E M    I P    Y  L+  L  
Sbjct: 370 FKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFT 429

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +   + L+ +M+  G   N VTY +L+ G C  G L+++      +I KG  PN   
Sbjct: 430 SKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVII 489

Query: 206 YSFLLEAAYKERGVHAAMKLL-----------------------------------DDII 230
            S ++ + Y+   +  A  LL                                   D+  
Sbjct: 490 CSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESA 549

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF----------------------------- 261
            K   PN V YN+ + GLCK G+  +A RFF                             
Sbjct: 550 IKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVN 609

Query: 262 -----RD-LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
                RD + +KG  PN+ +YN LL  LC  G  + A  L  ++      P +VTYNILI
Sbjct: 610 EAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILI 669

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G    AL +  +M+K    PS  +Y+ +I   C +  V+  +K L++M      
Sbjct: 670 DGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVD 729

Query: 376 PNEGTYNGLAMLC 388
               T++ L   C
Sbjct: 730 QTIATFSKLVEGC 742



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 6/292 (2%)

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           ++G  + A+  F ++   G +P++ S N LL +L   G    A  +  +M   D  P + 
Sbjct: 8   EKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVF 67

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T  I++ +    GK + A++ + EM K  F  +A SYN ++    S G ++     L  M
Sbjct: 68  TCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM 127

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGK 427
             +    N+ T   L    C   KV+EA  +++ +  +      E+ Y  +I   C+ GK
Sbjct: 128 SEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGK 187

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A ++  EM K G   + +  +SLI G C  G + E   + + M + D KPD  ++  
Sbjct: 188 MGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCT 247

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA----HQDELEL 535
           L+ G C+   +  +  V   M+ KG  P   TY  L++G+     ++D L L
Sbjct: 248 LVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRL 299



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 88/173 (50%), Gaps = 2/173 (1%)

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V+ A  +  ++G             ++++L ++G++Y A  +  +M +    PD +T 
Sbjct: 10  GMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTC 69

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + ++   C  G +E A+E    ME+  ++ +  ++N+L+ G       + +  V + M E
Sbjct: 70  AIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSE 129

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ--VVSESAVERLVMQY 561
           KG M N+ T T+L++G   Q ++E + +VL+E++     VV E A   L+  Y
Sbjct: 130 KGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGY 182



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 61/136 (44%)

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           KG    A  +   M KYG  P   + +SL+  L   G    A+ ++  M   D  PDV  
Sbjct: 9   KGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFT 68

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              ++   CK+ + + ++E  + M + G   N  +Y  LV+G     ++E +  VLK + 
Sbjct: 69  CAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMS 128

Query: 545 LRQVVSESAVERLVMQ 560
            + V+       L+++
Sbjct: 129 EKGVMRNKVTLTLLIK 144


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 231/462 (50%), Gaps = 4/462 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AFL   RMV++G     +    ++  LCK   ++ A      ++  G   D    T LV 
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214

Query: 142 CLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
             C++ ++G A ++ EKM  E+   P N+VTY+ L+ GLC  G L ++ Q    +++KG 
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRP-NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 273

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ L++A         AMK+LD++  K   PN+ +Y +L+  LC+EG+ EEA  
Sbjct: 274 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 333

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            FR +   G  P ++++N L+   C EG    A +LL+ M+ G+  P I TYN L+  L 
Sbjct: 334 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 393

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
              K+  A  +L  +V     P   +YN ++   C EG++++     + M     +P+  
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           T+  L   LC +G++++A  I+ S+  K  S  +  +  +I   C+ GK      L   M
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            +      ++T++  +  L  +  + EA  +   M +Y   P V     L+ G C++  T
Sbjct: 514 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 573

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            LSL++ + M + G  PN  TYTI++ G+ +   +E +  +L
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 615



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 217/456 (47%), Gaps = 6/456 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           R   L +AF   E+M  + + +P+ V  + L++ LC+A ++++A ++ + MV  G  P  
Sbjct: 218 RRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPST 277

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT L+   C  G    AM+++++M       N  TY  L+  LC  G + ++     +
Sbjct: 278 RTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRK 337

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ GL P   T++ L+    KE  V +A +LL  +     KPN+ +YN L+ GLC+  +
Sbjct: 338 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 397

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           + +A    R +   G  P+ V+YNIL+   C EG+   A  +   M+     P   T+  
Sbjct: 398 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 457

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+ + A  +L  MVK        ++  +I   C  GK   V    + M   R
Sbjct: 458 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 517

Query: 374 CKPNEGTYNGLAMLCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           C     T+N    L  +G   K+ EA A++  +           +  +I   CR G+T  
Sbjct: 518 CLTTAHTFN--CFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETAL 575

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           + ++L  M + G +P+ YTY+ +I GLC  G +EEA  I   M  +   P+   +  L+ 
Sbjct: 576 SLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVK 635

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
              K+ R D + ++   M++ G  PN   Y+ L+ G
Sbjct: 636 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 671



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 239/522 (45%), Gaps = 39/522 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +AF   + MV KG +P     T L+   C      KA+K+++ M +   +P+  +YT
Sbjct: 257 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 316

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC++G +  A  +  KM  +G     +T+N+L+ G C  G +  + Q L  + + 
Sbjct: 317 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 376

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  TY+ L+E   +    + A  LL  ++  G  P+ V+YN+L+ G CKEG+   A
Sbjct: 377 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 436

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  + S G EP+  ++  L+  LC  GR E+AN +L  M     S   VT+  LI  
Sbjct: 437 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 496

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK      + + MV+ R   +A ++N  +  L  + K++     L +M      P+
Sbjct: 497 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 556

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             T+  L    C  G+   +  +++ +  +   SP  + Y  +I  LC  G+  +A  +L
Sbjct: 557 VVTHTILIEGHCRAGETALSLKMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 615

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC-- 493
           + M+ +G +P+ +TY+ L++     G ++ A +I   M +   +P+   ++ALL G    
Sbjct: 616 FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLS 675

Query: 494 --------------------KSRRTD---LSLEVFQMM-----------IEKGQMPNETT 519
                                S   D   LS  VF++M           I+K  +P E  
Sbjct: 676 NTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL 735

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           Y  LV G+  +  +  + ++ +++    +  + A+  ++  Y
Sbjct: 736 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY 777



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 219/462 (47%), Gaps = 4/462 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M   G +      + LL  L K N    A  V   MV+ G +     Y  +VN LCK
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI-QKGLVPNAF 204
            G V  A     K+   G+  +T    SLV   C   +L ++ +  +++  ++   PN+ 
Sbjct: 184 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 243

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TYS L+    +   +  A +L  +++ KG +P+  +Y VL+   C  G T++A++   ++
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 303

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            +K   PNV +Y IL+  LC EG+ EEAN +  +M      P I+T+N LI      G  
Sbjct: 304 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 363

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A ++L  M KG  +P+  +YN ++  LC   K       L ++      P+  TYN L
Sbjct: 364 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 423

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
               C  G++  AF I  S+ N     P  F +  +I  LC+ G+  QA  +L  M K G
Sbjct: 424 VDGFCKEGQLNMAFNIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKG 482

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            + D  T+++LI G C  G  ++   +F  M E         FN  L  L K  + + + 
Sbjct: 483 ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEAN 542

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +   M++ G +P+  T+TIL+EG     E  LS ++L+ ++
Sbjct: 543 AMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 584



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 213/464 (45%), Gaps = 25/464 (5%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AFL L R+V  G  PD V    L+   CK  ++  A  +   M S+G+ PD  ++T L++
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G +  A  ++  M   G   + VT+ +L+ G C +G         + +++   + 
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
            A T++  L+A  K+  ++ A  +L  ++  G  P++V++ +L+ G C+ G T  +++  
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 580

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G  PNV +Y I++  LC  GR EEA  +L  M     SP   TY +L+ +    
Sbjct: 581 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 640

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIA------------RLCSEGKVDLVVKCLDQM 369
           G+ D A +++  MVK   +P++  Y+ +++             L S G +D         
Sbjct: 641 GRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD--------- 691

Query: 370 FHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             R     E   N L + +  +  V  A  I   +  K     ++ Y +++  LC++G+ 
Sbjct: 692 -ARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEI-KKCGVPTEDLYNFLVVGLCKEGRI 749

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A QL  +M K+G  PD    SS+I   C     +  LE   ++ +  + P   ++  +
Sbjct: 750 IEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWV 808

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           + GL    R   + ++   ++    +  E   T  +E +  ++E
Sbjct: 809 IHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEE 852



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 175/367 (47%), Gaps = 6/367 (1%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLL--EAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           +L+  +Q L  L+ + L   A     LL  E    E GV   M  LD +   G + +   
Sbjct: 79  DLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPC 138

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-M 299
           Y+ LL  L K      A   +R + ++GF    + Y  ++ +LC  G  + A     + +
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGK 358
             G    T V  ++++ +         A +V ++M K    RP++ +Y+ +I  LC  G+
Sbjct: 199 RLGFGLDTHVCTSLVLAN-CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 257

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           ++   +   +M  + C+P+  TY  L    C +G   +A  ++  +  K        Y  
Sbjct: 258 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 317

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  LCR+GK  +A  +  +M K+G  P   T+++LI G C EG +  A ++  VME+ +
Sbjct: 318 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 377

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            KP++  +N L+ GLC+  ++  +  + + +++ G +P+  TY ILV+G   + +L ++ 
Sbjct: 378 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 437

Query: 538 EVLKELQ 544
            +   + 
Sbjct: 438 NIFNSMN 444


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 214/459 (46%), Gaps = 52/459 (11%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F ++ER    G  P+VV    ++   CK  +  +A   +  M   G+ P+  ++  ++N 
Sbjct: 6   FKEMER---NGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LC+ G +    +++ +M   GY  + VTYN+LV G C  GN +Q+L     +++ GL PN
Sbjct: 63  LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+ +  K   ++ AM+  D +  +G  PN  +Y  ++ G  ++G  +EA R   
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++   GF P++V+YN L+   C+ GR EEA  LL +M G    P +V+Y+ +I   A + 
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + D A ++  EM+     P A +Y+ +I  LC + ++        +M   +  P+E TY 
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L                                  I + C++G   +A  L  EM + G
Sbjct: 303 TL----------------------------------INAYCKEGDLNKALHLHDEMIQKG 328

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN---------------A 487
           F PD+ TY+ LI GL  +   +EA  + + +   D  P    +N               A
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L+ G C     D + +VF+ MI K   PNE  Y +++ G
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHG 427



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 211/444 (47%), Gaps = 51/444 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + ++AF  L  M  KG +P+++    ++  LC+  ++K+  +V+  M   G +PD  +Y 
Sbjct: 33  RTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYN 92

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN  CK+GN   A+ L  +M   G   N VTY SL+  +C  GNLN++++F D++  +
Sbjct: 93  TLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVR 152

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN  TY+ ++    ++  +  A ++L+++   G  P++V+YN L+ G C  GR EEA
Sbjct: 153 GLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEA 212

Query: 258 IRFFRDLPSKGFEPNVVSYNI-----------------------------------LLRS 282
           I   +D+  KG  P+VVSY+                                    L++ 
Sbjct: 213 IGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQG 272

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC + R  EA ++  EM      P   TY  LI +    G  + AL + DEM++  F P 
Sbjct: 273 LCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPD 332

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM---------------- 386
           A +YN +I  L  + +     + L ++F+    P+  TYN L                  
Sbjct: 333 AVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKG 392

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C  G + EA  + +S+ NK +   +  Y  +I   CR G   +A++L  EM    F P 
Sbjct: 393 FCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPH 452

Query: 447 SYTYSSLIRGLCMEGLIEEALEIF 470
           + T  +L++ L  EG+  E  E+ 
Sbjct: 453 TVTVLALVKALFTEGMDGELNEVI 476



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 34/304 (11%)

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            +RFF+++   G  PNVV+YN ++   C   R +EA   L  M      P ++T+N++I 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G+     +VL EM +  + P   +YN ++   C EG     +    +M      P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           N  TY  L                                  I S+C+ G   +A +   
Sbjct: 122 NVVTYTSL----------------------------------INSMCKAGNLNRAMEFFD 147

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M   G  P+  TY+++I G   +GL++EA  +   M    + P +  +NAL+ G C   
Sbjct: 148 QMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLG 207

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           R + ++ + Q M+ KG +P+  +Y+ ++ G A   EL+ + ++  E+  + V+ ++    
Sbjct: 208 RMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYS 267

Query: 557 LVMQ 560
            ++Q
Sbjct: 268 SLIQ 271



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 50/325 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A   L+ MV KG  PDVV  + ++    +  ++ +A ++   M+   ++PDA +Y+
Sbjct: 208 RMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYS 267

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC++  +  A  + ++M     P +  TY +L+   C  G+LN++L   D +IQK
Sbjct: 268 SLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQK 327

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL------------ 245
           G +P+A TY+ L+    K+     A +LL  +      P+ V+YN L+            
Sbjct: 328 GFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAV 387

Query: 246 ---TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
               G C +G  +EA + F  + +K  +PN   YN+++   C  G   +A +L  EM   
Sbjct: 388 ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447

Query: 303 DRSPTIVTYNILIGSL-----------------------------------AYHGKTDHA 327
           D  P  VT   L+ +L                                      G  D  
Sbjct: 448 DFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMV 507

Query: 328 LKVLDEMVKGRFRPSAASYNPIIAR 352
             +L EM K    PS  +    IAR
Sbjct: 508 FNLLTEMAKDGLIPSTGTPTNAIAR 532



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 1/101 (0%)

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
            L  F  ME     P+V  +N ++ G CK +RTD +    + M  KG  PN  T+ +++ 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 526 GIAHQDELELSAEVLKELQLRQVV-SESAVERLVMQYDFEG 565
           G+     L+ ++EVL E+  +  V  E     LV  Y  EG
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEG 102


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 231/462 (50%), Gaps = 4/462 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AFL   RMV++G     +    ++  LCK   ++ A      ++  G   D    T LV 
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237

Query: 142 CLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
             C++ ++G A ++ EKM  E+   P N+VTY+ L+ GLC  G L ++ Q    +++KG 
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRP-NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 296

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ L++A         AMK+LD++  K   PN+ +Y +L+  LC+EG+ EEA  
Sbjct: 297 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 356

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            FR +   G  P ++++N L+   C EG    A +LL+ M+ G+  P I TYN L+  L 
Sbjct: 357 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 416

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
              K+  A  +L  +V     P   +YN ++   C EG++++     + M     +P+  
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           T+  L   LC +G++++A  I+ S+  K  S  +  +  +I   C+ GK      L   M
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            +      ++T++  +  L  +  + EA  +   M +Y   P V     L+ G C++  T
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            LSL++ + M + G  PN  TYTI++ G+ +   +E +  +L
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 638



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 217/456 (47%), Gaps = 6/456 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           R   L +AF   E+M  + + +P+ V  + L++ LC+A ++++A ++ + MV  G  P  
Sbjct: 241 RRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPST 300

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT L+   C  G    AM+++++M       N  TY  L+  LC  G + ++     +
Sbjct: 301 RTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRK 360

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ GL P   T++ L+    KE  V +A +LL  +     KPN+ +YN L+ GLC+  +
Sbjct: 361 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 420

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           + +A    R +   G  P+ V+YNIL+   C EG+   A  +   M+     P   T+  
Sbjct: 421 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 480

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+ + A  +L  MVK        ++  +I   C  GK   V    + M   R
Sbjct: 481 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 540

Query: 374 CKPNEGTYNGLAMLCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           C     T+N    L  +G   K+ EA A++  +           +  +I   CR G+T  
Sbjct: 541 CLTTAHTFN--CFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETAL 598

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           + ++L  M + G +P+ YTY+ +I GLC  G +EEA  I   M  +   P+   +  L+ 
Sbjct: 599 SLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVK 658

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
              K+ R D + ++   M++ G  PN   Y+ L+ G
Sbjct: 659 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 694



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 234/506 (46%), Gaps = 64/506 (12%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +AF   + MV KG +P     T L+   C      KA+K+++ M +   +P+  +YT
Sbjct: 280 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 339

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC++G +  A  +  KM  +G     +T+N+L+ G C  G +  + Q L  + + 
Sbjct: 340 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 399

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  TY+ L+E   +    + A  LL  ++  G  P+ V+YN+L+ G CKEG+   A
Sbjct: 400 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 459

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----------------DG 301
              F  + S G EP+  ++  L+  LC  GR E+AN +L  M                DG
Sbjct: 460 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 519

Query: 302 G------------------DRSPTIV-TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
                              +R  T   T+N  + +L    K + A  +L +M+K    PS
Sbjct: 520 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 579

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFA 398
             ++  +I   C  G+  L +K L++M    C PN  TY    NG   LC  G+V+EA  
Sbjct: 580 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIING---LCNNGRVEEAET 636

Query: 399 IIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           I+ S+ +    SP  F Y  ++ +  + G+  +AFQ++  M K G  P+S+ YS+L+ G 
Sbjct: 637 ILFSM-SSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGF 695

Query: 458 CMEGLIEEALEI---------FVVMEEYDYK-----------PDVDNFNALLLGLCKSRR 497
            +      A  +          +  EE D             P  D +N L++GLCK  R
Sbjct: 696 VLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGR 755

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTIL 523
              + ++ Q M++ G  P++   +I+
Sbjct: 756 IIEADQLTQDMVKHGLFPDKAISSII 781



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 203/431 (47%), Gaps = 39/431 (9%)

Query: 100 QATNLLYDLCK--ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV- 156
           +A  LL   C+   N + K +  ++ M   G       Y+ L+ CL K  N+G+   LV 
Sbjct: 124 KAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKL-NMGFVAFLVY 182

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
            +M + G+    + Y ++V  LC  G +  +  F  ++++ G   +    + L+ A  + 
Sbjct: 183 RRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRR 242

Query: 217 RGVHAAMKLLDDIIA-KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
             +  A ++ + +   +  +PN V+Y++L+ GLC+ GR EEA +  +++  KG +P+  +
Sbjct: 243 DDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 302

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y +L+++ C  G  ++A ++L EM      P + TY ILI  L   GK + A  V  +M+
Sbjct: 303 YTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKML 362

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           K    P   ++N +I   C EG V    + L  M    CKPN  TYN L           
Sbjct: 363 KHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL----------- 411

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
                                  +  LCR  K+Y+AF LL  +   G  PD  TY+ L+ 
Sbjct: 412 -----------------------MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 448

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G C EG +  A  IF  M     +PD   F AL+ GLCK  R + +  +   M++KG   
Sbjct: 449 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 508

Query: 516 NETTYTILVEG 526
           +E T+T L++G
Sbjct: 509 DEVTFTALIDG 519



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 211/473 (44%), Gaps = 45/473 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K   AFL L R+V  G  PD V    L+   CK  ++  A  +   M S+G+ PD  
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++ LCK G +  A  ++  M   G   + VT+ +L+ G C +G         + +
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++   +  A T++  L+A  K+  ++ A  +L  ++  G  P++V++ +L+ G C+ G T
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             +++    +   G  PNV +Y I++  LC  GR EEA  +L  M     SP   TY +L
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA------------RLCSEGKVDLV 362
           + +    G+ D A +++  MVK   +P++  Y+ +++             L S G +D  
Sbjct: 657 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-- 714

Query: 363 VKCLDQMFHRRCKPNEGTYNGLA---MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                    R     E   N L+     CGV                     ++ Y +++
Sbjct: 715 --------ARSLSSEENDNNCLSNEIKKCGV-------------------PTEDLYNFLV 747

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC++G+  +A QL  +M K+G  PD    SS+I   C     +  LE   ++ +  + 
Sbjct: 748 VGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFV 806

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           P   ++  ++ GL    R   + ++   ++    +  E   T  +E +  ++E
Sbjct: 807 PSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEE 859



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 175/367 (47%), Gaps = 6/367 (1%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLL--EAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           +L+  +Q L  L+ + L   A     LL  E    E GV   M  LD +   G + +   
Sbjct: 102 DLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPC 161

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-M 299
           Y+ LL  L K      A   +R + ++GF    + Y  ++ +LC  G  + A     + +
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGK 358
             G    T V  ++++ +         A +V ++M K    RP++ +Y+ +I  LC  G+
Sbjct: 222 RLGFGLDTHVCTSLVLAN-CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 280

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           ++   +   +M  + C+P+  TY  L    C +G   +A  ++  +  K        Y  
Sbjct: 281 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 340

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  LCR+GK  +A  +  +M K+G  P   T+++LI G C EG +  A ++  VME+ +
Sbjct: 341 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 400

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            KP++  +N L+ GLC+  ++  +  + + +++ G +P+  TY ILV+G   + +L ++ 
Sbjct: 401 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 460

Query: 538 EVLKELQ 544
            +   + 
Sbjct: 461 NIFNSMN 467


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 233/479 (48%), Gaps = 10/479 (2%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H ++DA      M+ +G  P+ +  + LL  L KA K ++A+ + +  ++ G+  +  ++
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++N LCK G +  A +L+++M++   P +++TY +L  G C LG L  +   ++++  
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G  P+   ++  +   +  +  H    +  ++ A+G  PNLV+Y  L+ G CKEG   E
Sbjct: 563 LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHE 622

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   + ++ + G  PNV   + L+     EG+ +EAN +L ++   D  P      I I 
Sbjct: 623 ACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID 682

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            +++         V+D +  G    +   +N II  LC  G++       + + ++R  P
Sbjct: 683 KISH---------VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLP 733

Query: 377 NEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY+ L   C   G + EAF++   + +   +     Y  +I  LC+ GK  +A  L 
Sbjct: 734 DNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLF 793

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            ++   G +P+  TY++LI   C EG   EA ++   M E   +P V  ++ L+ GLC  
Sbjct: 794 NKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQ 853

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
              + ++++   MIE    PN  TY  L+ G      +E  +++  E+ +R ++  + +
Sbjct: 854 GYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 912



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 241/528 (45%), Gaps = 62/528 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA      M   G   ++     ++  LCK  +M++  KV++ M   G+ PD  SY 
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C++G++  A ++   M   G    T+TYN+L++G C L  ++ +L+    ++++
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR 458

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  + S LL+  +K      A+ L  + +A+G   N++++N ++ GLCK GR  EA
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 258 ------IRFFRDLPSK-----------------------------GFEPNVVSYNILLRS 282
                 ++  R  P                               GF P+V  +N  +  
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
             +  +W + N++ +EM     SP +VTY  LI      G    A  +  EMV     P+
Sbjct: 579 HFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638

Query: 343 AASYNPIIARLCSEGKVD-------------LVVKC------LDQMFHRRCKPNEGT--- 380
               + +++    EGKVD             ++  C      +D++ H      +G    
Sbjct: 639 VFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHS 698

Query: 381 ----YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
               +N +   LC  G++ +A ++ +SL NK+       Y  +I      G   +AF L 
Sbjct: 699 ANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLR 758

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M   G TP+  TY+SLI GLC  G +  A+ +F  ++     P+   +N L+   CK 
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +T  + ++ Q M+E+G  P   TY+IL+ G+  Q  +E + ++L ++
Sbjct: 819 GKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 249/580 (42%), Gaps = 106/580 (18%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDASSYTYL 139
           DA   LE +  KG  P+VV  T L+   CK  +M++A +V++ M  +G I+ D  +Y  +
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N  C++G +  A ++  +M D G   N   YN+++ GLC LG + +  + L  +   G+
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKL----------------------------LDD--- 228
            P+ ++Y+ L++   +E  +  A ++                            +DD   
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 229 ----IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
               ++ +G  PN +S + LL GL K G+TE+A+  +++  ++G   NV+++N ++  LC
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM---------- 334
             GR  EA ELL  M      P  +TY  L       G+   A  ++++M          
Sbjct: 511 KIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVE 570

Query: 335 -----VKGRF--------------------RPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
                + G F                     P+  +Y  +IA  C EG +        +M
Sbjct: 571 MFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630

Query: 370 FHRRCKPNEGTYNGLAMLC--GVGKVQEAFAIIQSLGN---------------------- 405
            +    PN    + L M C    GKV EA  ++Q L N                      
Sbjct: 631 VNNGMNPNVFICSAL-MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVD 689

Query: 406 ----KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                   S    +  +I  LC+ G+   A  L   +    F PD++TYSSLI G    G
Sbjct: 690 TIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASG 749

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I+EA  +  VM      P++  +N+L+ GLCKS +   ++ +F  +  KG  PN  TY 
Sbjct: 750 SIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYN 809

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            L+      DE     +  +  +L+Q + E  ++  V+ Y
Sbjct: 810 TLI------DEYCKEGKTTEAFKLKQKMVEEGIQPTVITY 843



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 216/468 (46%), Gaps = 2/468 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L+ A    + M   G +P +     LL  L ++     A  V   M  +G++PD  +  
Sbjct: 163 QLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVA 222

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +    C+ G V  A++ VE+ME  G   N V Y++++   C +G    + + L+ L +K
Sbjct: 223 IMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRK 282

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEE 256
           GL PN  TY+ L++   K+  +  A +++ ++   G    + V+Y +++ G C+ GR ++
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A R   ++   G   N+  YN ++  LC  GR EE  ++L EM+     P   +YN LI 
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G    A ++   MV+     +  +YN ++   CS   +D  ++    M  R   P
Sbjct: 403 GYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAP 462

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           NE + + L   L   GK ++A  + +    +  +     +  VI  LC+ G+  +A +LL
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL 522

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M +    PDS TY +L  G C  G +  A  +   ME   + P V+ FN+ + G   +
Sbjct: 523 DRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIA 582

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           ++     ++   M  +G  PN  TY  L+ G   +  L  +  +  E+
Sbjct: 583 KQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 213/457 (46%), Gaps = 2/457 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD ++  A   +E M   G + ++V    ++   C     + A +++E +   G+ P+  
Sbjct: 230 RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVV 289

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +YT LV   CK G +  A ++V++M++ G    + V Y  ++ G C  G ++ + +  + 
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G+  N F Y+ ++    K   +    K+L ++   G +P+  SYN L+ G C+EG 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +A    R +   G     ++YN LL+  C     ++A  L   M     +P  ++ + 
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L   GKT+ AL +  E +      +  ++N +I  LC  G++    + LD+M   R
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+  TY  L    C +G++  A  ++  + +   +   E +   IT      + ++  
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            +  EM+  G +P+  TY +LI G C EG + EA  ++  M      P+V   +AL+   
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCF 649

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
            K  + D +  V Q ++    +P  +  TI ++ I+H
Sbjct: 650 YKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 219/479 (45%), Gaps = 17/479 (3%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM-------------VSS 127
           DA L L R+     +P +V    LL+ L +A +   A  ++  +             V  
Sbjct: 85  DAALHLFRLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYR 142

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
                A S+  L+      G +  A+ + + M   G   +  + N L+  L   G+   +
Sbjct: 143 DFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMA 202

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                ++   G++P+ FT + + +A  ++  V  A++ ++++   G + NLV+Y+ ++  
Sbjct: 203 AMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDC 262

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSP 306
            C  G TE+A R    L  KG  PNVV+Y +L++  C +GR EEA  ++ EM + GD   
Sbjct: 263 YCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVV 322

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
             V Y ++I      G+ D A +V +EM       +   YN +I  LC  G+++ V K L
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 367 DQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            +M     +P++ +YN L    C  G +++AF + + +     ++    Y  ++   C  
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
                A +L + M K G  P+  + S+L+ GL   G  E+AL ++          +V  F
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           N ++ GLCK  R   + E+   M E    P+  TY  L +G     +L  +  ++ +++
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 56/96 (58%), Gaps = 1/96 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K  +AF   ++MV +G +P V+  + L+Y LC    M++AIK+++ M+ + + P+  
Sbjct: 817 KEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYI 876

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTV 169
           +Y  L++   K GN+    +L ++M   G  PTN +
Sbjct: 877 TYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 912


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 230/469 (49%), Gaps = 4/469 (0%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           KL DA   LERMVS+    PD V    +L  + K  ++    +++  M  +G++P+  +Y
Sbjct: 219 KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY 278

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             LV   CK G++  A Q+VE M+      +  TYN L+ GLC  G++ + L+ +D +  
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             L P+  TY+ L++  ++      A KL++ +   G K N V++N+ L  LCKE + E 
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398

Query: 257 AIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
             R  ++L    GF P++V+Y+ L+++    G    A E++ EM         +T N ++
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            +L    K D A  +L+   K  F     +Y  +I     E KV+  ++  D+M   +  
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P   T+N L   LC  GK + A      L           +  +I   C++G+  +AF+ 
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             E  K+ F PD+YT + L+ GLC EG+ E+AL  F  + E + + D   +N ++   CK
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMISAFCK 637

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            ++   + ++   M EKG  P+  TY   +  +    +L  + E+LK+ 
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 232/450 (51%), Gaps = 5/450 (1%)

Query: 99  VQATNLLYD-LCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           VQ  N+L +  C   K++ A+ ++E MVS   + PD  +Y  ++  + KKG +    +L+
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
             M+  G   N VTYN+LV G C LG+L ++ Q ++ + Q  ++P+  TY+ L+      
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
             +   ++L+D + +   +P++V+YN L+ G  + G + EA +    + + G + N V++
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383

Query: 277 NILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           NI L+ LC E + E     + E+ D    SP IVTY+ LI +    G    AL+++ EM 
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           +   + +  + N I+  LC E K+D     L+    R    +E TY  L M      KV+
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A  +   +   + +     +  +I  LC  GKT  A +   E+ + G  PD  T++S+I
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G C EG +E+A E +    ++ +KPD    N LL GLCK   T+ +L  F  +IE+ ++
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV 623

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +  TY  ++       +L+ + ++L E++
Sbjct: 624 -DTVTYNTMISAFCKDKKLKEAYDLLSEME 652



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 215/432 (49%), Gaps = 6/432 (1%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCK---KGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           A+++ + M+   + P+  +   L+  L +     ++  A ++ + M   G   N  T+N 
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           LV G C+ G L  +L  L+R++ +  V P+  TY+ +L+A  K+  +    +LL D+   
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G  PN V+YN L+ G CK G  +EA +    +      P++ +YNIL+  LC  G   E 
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            EL+  M      P +VTYN LI      G +  A K++++M     + +  ++N  +  
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389

Query: 353 LCSEGKVDLVVKCLDQMFHRR-CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSS 410
           LC E K + V + + ++       P+  TY+ L      VG +  A  +++ +G K    
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
                  ++ +LC++ K  +A  LL    K GF  D  TY +LI G   E  +E+ALE++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M++    P V  FN+L+ GLC   +T+L++E F  + E G +P+++T+  ++ G   +
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569

Query: 531 DELELSAEVLKE 542
             +E + E   E
Sbjct: 570 GRVEKAFEFYNE 581



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 184/369 (49%), Gaps = 6/369 (1%)

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK---ERGVHAAMKLLDDIIAKGGKPNL 238
           G  + +LQ   ++I+  L PN  T + LL    +      + +A ++ DD++  G   N+
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLA 297
            ++NVL+ G C EG+ E+A+     + S+    P+ V+YN +L+++  +GR  +  ELL 
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +M      P  VTYN L+      G    A ++++ M +    P   +YN +I  LC+ G
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
            +   ++ +D M   + +P+  TYN L   C  +G   EA  +++ + N    + Q  + 
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384

Query: 417 YVITSLCRKGKTYQAFQLLYEMTK-YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +  LC++ K     + + E+   +GF+PD  TY +LI+     G +  ALE+   M +
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              K +    N +L  LCK R+ D +  +     ++G + +E TY  L+ G   ++++E 
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504

Query: 536 SAEVLKELQ 544
           + E+  E++
Sbjct: 505 ALEMWDEMK 513



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 15/382 (3%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAI-KVMEMMVSSGIIPDASSYTYLVNCLC 144
           +E+M + G K + V     L  LCK  K +    KV E++   G  PD  +Y  L+    
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K G++  A++++ +M   G   NT+T N+++  LC    L+++   L+   ++G + +  
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY  L+   ++E  V  A+++ D++      P + ++N L+ GLC  G+TE A+  F +L
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G  P+  ++N ++   C EGR E+A E   E       P   T NIL+  L   G T
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG- 383
           + AL   + +++ R      +YN +I+  C + K+      L +M  +  +P+  TYN  
Sbjct: 608 EKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           +++L   GK+ E   +++    K              S+ R  +           +K   
Sbjct: 667 ISLLMEDGKLSETDELLKKFSGK------------FGSMKRDLQVETEKNPATSESKEEL 714

Query: 444 TPDSYTYSSLIRGLCMEGLIEE 465
             ++  YS +I  LC  G ++E
Sbjct: 715 NTEAIAYSDVIDELCSRGRLKE 736



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 24/304 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A   +  M  KG K + +    +L  LCK  K+ +A  ++      G I D  +Y  
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+    ++  V  A+++ ++M+         T+NSL+ GLC  G    +++  D L + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L+P+  T++ ++    KE  V  A +  ++ I    KP+  + N+LL GLCKEG TE+A+
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            FF  L  +  E + V+YN ++ + C + + +EA +LL+EM+     P   TYN  I  L
Sbjct: 612 NFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670

Query: 319 AYHGK---TDHALKVL---------DEMVKGRFRPS-----------AASYNPIIARLCS 355
              GK   TD  LK           D  V+    P+           A +Y+ +I  LCS
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCS 730

Query: 356 EGKV 359
            G++
Sbjct: 731 RGRL 734



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 32/187 (17%)

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAII 400
           PS A ++  ++    EGK  + ++   +M   + KPN  T N L  L G+ +   +F+I 
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTL--LIGLVRYPSSFSI- 185

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
                   SS +E +                     +M K G + +  T++ L+ G C+E
Sbjct: 186 --------SSAREVFD--------------------DMVKIGVSLNVQTFNVLVNGYCLE 217

Query: 461 GLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           G +E+AL +   M  E+   PD   +N +L  + K  R     E+   M + G +PN  T
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277

Query: 520 YTILVEG 526
           Y  LV G
Sbjct: 278 YNNLVYG 284


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 231/462 (50%), Gaps = 4/462 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AFL   RMV++G     +    ++  LCK   ++ A      ++  G   D    T LV 
Sbjct: 112 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 171

Query: 142 CLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
             C++ ++G A ++ EKM  E+   P N+VTY+ L+ GLC  G L ++ Q    +++KG 
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRP-NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 230

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ L++A         AMK+LD++  K   PN+ +Y +L+  LC+EG+ EEA  
Sbjct: 231 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 290

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            FR +   G  P ++++N L+   C EG    A +LL+ M+ G+  P I TYN L+  L 
Sbjct: 291 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 350

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
              K+  A  +L  +V     P   +YN ++   C EG++++     + M     +P+  
Sbjct: 351 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 410

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           T+  L   LC +G++++A  I+ S+  K  S  +  +  +I   C+ GK      L   M
Sbjct: 411 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 470

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            +      ++T++  +  L  +  + EA  +   M +Y   P V     L+ G C++  T
Sbjct: 471 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 530

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            LSL++ + M + G  PN  TYTI++ G+ +   +E +  +L
Sbjct: 531 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 572



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 216/456 (47%), Gaps = 6/456 (1%)

Query: 75  RDHKLNDAFLQLERMVSK-GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           R   L +AF   E+M  +   +P+ V  + L++ LC+A ++++A ++ + MV  G  P  
Sbjct: 175 RRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPST 234

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT L+   C  G    AM+++++M       N  TY  L+  LC  G + ++     +
Sbjct: 235 RTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRK 294

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ GL P   T++ L+    KE  V +A +LL  +     KPN+ +YN L+ GLC+  +
Sbjct: 295 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 354

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           + +A    R +   G  P+ V+YNIL+   C EG+   A  +   M+     P   T+  
Sbjct: 355 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 414

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+ + A  +L  MVK        ++  +I   C  GK   V    + M   R
Sbjct: 415 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 474

Query: 374 CKPNEGTYNGLAMLCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           C     T+N    L  +G   K+ EA A++  +           +  +I   CR G+T  
Sbjct: 475 CLTTAHTFN--CFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETAL 532

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           + ++L  M + G +P+ YTY+ +I GLC  G +EEA  I   M  +   P+   +  L+ 
Sbjct: 533 SLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVK 592

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
              K+ R D + ++   M++ G  PN   Y+ L+ G
Sbjct: 593 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 628



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 239/522 (45%), Gaps = 39/522 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +AF   + MV KG +P     T L+   C      KA+K+++ M +   +P+  +YT
Sbjct: 214 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 273

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC++G +  A  +  KM  +G     +T+N+L+ G C  G +  + Q L  + + 
Sbjct: 274 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 333

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  TY+ L+E   +    + A  LL  ++  G  P+ V+YN+L+ G CKEG+   A
Sbjct: 334 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 393

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  + S G EP+  ++  L+  LC  GR E+AN +L  M     S   VT+  LI  
Sbjct: 394 FNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDG 453

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK      + + MV+ R   +A ++N  +  L  + K++     L +M      P+
Sbjct: 454 HCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 513

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             T+  L    C  G+   +  +++ +  +   SP  + Y  +I  LC  G+  +A  +L
Sbjct: 514 VVTHTILIEGHCRAGETALSLKMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 572

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC-- 493
           + M+ +G +P+ +TY+ L++     G ++ A +I   M +   +P+   ++ALL G    
Sbjct: 573 FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLS 632

Query: 494 --------------------KSRRTD---LSLEVFQMM-----------IEKGQMPNETT 519
                                S   D   LS  VF++M           I+K  +P E  
Sbjct: 633 NTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL 692

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           Y  LV G+  +  +  + ++ +++    +  + A+  ++  Y
Sbjct: 693 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY 734



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 219/462 (47%), Gaps = 4/462 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M   G +      + LL  L K N    A  V   MV+ G +     Y  +VN LCK
Sbjct: 81  LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI-QKGLVPNAF 204
            G V  A     K+   G+  +T    SLV   C   +L ++ +  +++  ++   PN+ 
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSV 200

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TYS L+    +   +  A +L  +++ KG +P+  +Y VL+   C  G T++A++   ++
Sbjct: 201 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 260

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            +K   PNV +Y IL+  LC EG+ EEAN +  +M      P I+T+N LI      G  
Sbjct: 261 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 320

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A ++L  M KG  +P+  +YN ++  LC   K       L ++      P+  TYN L
Sbjct: 321 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 380

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
               C  G++  AF I  S+ N     P  F +  +I  LC+ G+  QA  +L  M K G
Sbjct: 381 VDGFCKEGQLNMAFNIFNSM-NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKG 439

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            + D  T+++LI G C  G  ++   +F  M E         FN  L  L K  + + + 
Sbjct: 440 ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEAN 499

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +   M++ G +P+  T+TIL+EG     E  LS ++L+ ++
Sbjct: 500 AMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 541



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 222/494 (44%), Gaps = 30/494 (6%)

Query: 57  SVYTKPNRKPGNNN-----DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA 111
           SV  K N KP         +   R  K   AFL L R+V  G  PD V    L+   CK 
Sbjct: 328 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 387

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
            ++  A  +   M S+G+ PD  ++T L++ LCK G +  A  ++  M   G   + VT+
Sbjct: 388 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 447

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
            +L+ G C +G         + +++   +  A T++  L+A  K+  ++ A  +L  ++ 
Sbjct: 448 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 507

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G  P++V++ +L+ G C+ G T  +++    +   G  PNV +Y I++  LC  GR EE
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 567

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  +L  M     SP   TY +L+ +    G+ D A +++  MVK   +P++  Y+ +++
Sbjct: 568 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 627

Query: 352 ------------RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFA 398
                        L S G +D           R     E   N L + +  +  V  A  
Sbjct: 628 GFVLSNTAIGARALSSTGDLD----------ARSLSSEENDNNCLSSHVFRLMDVDHALK 677

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           I   +  K     ++ Y +++  LC++G+  +A QL  +M K+G  PD    SS+I   C
Sbjct: 678 IRDEI-KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYC 735

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
                +  LE   ++ +  + P   ++  ++ GL    R   + ++   ++    +  E 
Sbjct: 736 KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEV 795

Query: 519 TYTILVEGIAHQDE 532
             T  +E +  ++E
Sbjct: 796 EVTPSIEFLMKEEE 809



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 175/367 (47%), Gaps = 6/367 (1%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLL--EAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           +L+  +Q L  L+ + L   A     LL  E    E GV   M  LD +   G + +   
Sbjct: 36  DLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPC 95

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-M 299
           Y+ LL  L K      A   +R + ++GF    + Y  ++ +LC  G  + A     + +
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGK 358
             G    T V  ++++ +         A +V ++M K    RP++ +Y+ +I  LC  G+
Sbjct: 156 RLGFGLDTHVCTSLVLAN-CRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGR 214

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           ++   +   +M  + C+P+  TY  L    C +G   +A  ++  +  K        Y  
Sbjct: 215 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 274

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  LCR+GK  +A  +  +M K+G  P   T+++LI G C EG +  A ++  VME+ +
Sbjct: 275 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 334

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            KP++  +N L+ GLC+  ++  +  + + +++ G +P+  TY ILV+G   + +L ++ 
Sbjct: 335 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 394

Query: 538 EVLKELQ 544
            +   + 
Sbjct: 395 NIFNSMN 401


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 222/453 (49%), Gaps = 5/453 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A    + +  +G  PD +  + L+    K N++  A+ +++ M S  + PDA  Y  
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 139 LVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           L+    + G    AM++ E++  D G   N  TYN ++ GLC LG   ++    +R++  
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+  TY  ++    +   V +A ++  ++I  G  P++V YN LL G C  GR  EA
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIVTYNILIG 316
            +F+  +   G   NV SYNI+L+ L   G  ++A +L   ++  D  SP +VT++ +I 
Sbjct: 355 WKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIH 413

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G  + +L++L+E           SY+ +I+ LC +G++D  VK  +++     KP
Sbjct: 414 GLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKP 473

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N   YN L    C   K  +A  +   +     S     Y  +I  LC+  K  +A +  
Sbjct: 474 NSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFT 533

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM + G   D  TY SLIRGLC +  I+ AL ++  + +   + DV   N L+ GLC +
Sbjct: 534 REMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSA 593

Query: 496 RRTDLSLEVFQMMIEKGQ-MPNETTYTILVEGI 527
            + D + ++   M EK    PN  TY  L++G 
Sbjct: 594 GKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGF 626



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 195/382 (51%), Gaps = 8/382 (2%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  TYN ++R LC+ G+L++++   D L  +GL P+  TYS L+    K   +  A+ LL
Sbjct: 158 NLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLL 217

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCM 285
           D++ +   +P+ V YN LL G  + G  E+A+R +  L    G  PN+ +YN++L  LC 
Sbjct: 218 DEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCK 277

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            G ++EA ++   M   +  P ++TY  +I  L      D A +V  EM+K    P    
Sbjct: 278 LGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVI 337

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQS 402
           YN ++   C  G+V    K  D M     + N  +YN   ML G+   G V +A  + + 
Sbjct: 338 YNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYN--IMLKGLFDGGMVDKATDLWEL 394

Query: 403 LGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           L    + SP    +  +I  LC KG   ++ Q+L E    G   D ++YSS+I GLC +G
Sbjct: 395 LEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDG 454

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +++A++++  +    +KP+   +NAL+ G C++ +   ++ V+  M E    P   TY 
Sbjct: 455 RLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYN 514

Query: 522 ILVEGIAHQDELELSAEVLKEL 543
            L+ G+   ++   ++   +E+
Sbjct: 515 TLIHGLCKAEKYLEASRFTREM 536



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 203/412 (49%), Gaps = 6/412 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ERMV+  H+PD++    +++ LC++  +  A +V   M+ +G++PD   Y  L+   C  
Sbjct: 289 ERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHA 348

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK--GLVPNAF 204
           G VG A +  + M   G   N  +YN +++GL   G ++++    + L++K   L P+  
Sbjct: 349 GRVGEAWKFWDSMSVSGI-RNVTSYNIMLKGLFDGGMVDKATDLWE-LLEKDDSLSPDMV 406

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T+S ++    ++   + ++++L++    G + +  SY+ +++GLCK+GR ++A++ +  +
Sbjct: 407 TFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI 466

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
               F+PN   YN L+   C   ++ +A  + ++M   D SPT +TYN LI  L    K 
Sbjct: 467 SMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKY 526

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A +   EM++        +Y  +I  LC + K+D  +   +Q+  +  + +   +N L
Sbjct: 527 LEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNIL 586

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
              LC  GKV EA  ++  +  K N  P    Y  ++      G   +A  L   + + G
Sbjct: 587 IHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENG 646

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             PD  +Y++ I+GLC      E +++   M      P    +N L+  + K
Sbjct: 647 LVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIK 698



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 176/388 (45%), Gaps = 49/388 (12%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +V +AF+ + + +AA       AA + L   +  G  P + S+N LL    +  R  +A 
Sbjct: 89  VVLSAFSRALMPDAAL------AAFRRLPSFL--GCNPGVRSHNALLDAFVRARRFSDAD 140

Query: 259 RFFRDLPSKGF----EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            FF  L    F     PN+ +YNI+LRSLC+ G  + A  L   +     +P  +TY+ L
Sbjct: 141 AFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTL 200

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR- 373
           +     + + D+AL +LDEM     +P A  YN ++      G+ +  ++  +Q+     
Sbjct: 201 MSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPG 260

Query: 374 CKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             PN  TYN  L  LC +G  +EA  + + +    +      Y  +I  LCR      A 
Sbjct: 261 ASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAA 320

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEG------------------------------- 461
           ++  EM K G  PD   Y+SL++G C  G                               
Sbjct: 321 RVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLF 380

Query: 462 ---LIEEALEIFVVMEEYD-YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
              ++++A +++ ++E+ D   PD+  F+ ++ GLC+    + SL++ +     G+  +E
Sbjct: 381 DGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDE 440

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQL 545
            +Y+ ++ G+     L+ + ++ +++ +
Sbjct: 441 FSYSSMISGLCKDGRLDDAVKLYEKISM 468



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           N +   LE   + G + D    ++++  LCK  ++  A+K+ E +      P++  Y  L
Sbjct: 422 NKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNAL 481

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N  C+      A+++  +M +      T+TYN+L+ GLC      ++ +F   +++KG 
Sbjct: 482 INGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGC 541

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           + +  TY  L+    +++ +  A+ L + I+ KG + ++V +N+L+ GLC  G+ +EA +
Sbjct: 542 MLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQ 601

Query: 260 FFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
              ++  K    PNVV+YN L+      G +++A  L   +      P I++YN  I  L
Sbjct: 602 LLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGL 661

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               +T   +++L+EM+     P+A ++N ++  +   G + +
Sbjct: 662 CSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQI 704



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 124/249 (49%), Gaps = 1/249 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +L+DA    E++     KP+      L+   C+A+K   AI+V   M  +   P   
Sbjct: 452 KDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTI 511

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK      A +   +M + G   +  TY SL+RGLC    ++ +L   +++
Sbjct: 512 TYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQI 571

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGR 253
           + KGL  +   ++ L+        V  A +LL ++  K    PN+V+YN L+ G  + G 
Sbjct: 572 LDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGC 631

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A   +  +   G  P+++SYN  ++ LC   R  E  +LL EM      PT +T+NI
Sbjct: 632 FDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNI 691

Query: 314 LIGSLAYHG 322
           L+ ++  +G
Sbjct: 692 LVRAVIKYG 700


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 216/455 (47%), Gaps = 6/455 (1%)

Query: 63  NRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME 122
           +R  G    T+     L +      +M+     P +V  + +L  + K+      I +  
Sbjct: 34  SRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFH 93

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
            M   GI  D  SY  ++NCLC+      A+ +V KM  +GY  + VT +SL+ G C   
Sbjct: 94  HMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGN 153

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
            +  ++  + ++ + G  P+   Y+ +++ + K   V+ A++L D +   G + + V+YN
Sbjct: 154 RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 213

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            L+ GLC  GR  +A R  RD+  +   PNV+++  ++     EG++ EA +L  EM   
Sbjct: 214 SLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P + TYN LI  L  HG+ D A ++LD MV     P   +YN +I   C   +VD  
Sbjct: 274 CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVIT 420
            K   +M  R    +  TYN +       G+   A    Q + ++ +S P    Y  ++ 
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA----QEIFSRMDSRPNIRTYSILLY 389

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            LC   +  +A  L   M K     D  TY+ +I G+C  G +E+A ++F  +     KP
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           DV ++  ++ G C+ R+ D S  +++ M E G +P
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 209/432 (48%), Gaps = 4/432 (0%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +++ I +   M+ S  +P    ++ +++ + K  N    + L   ME  G   +  +YN 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           ++  LC       +L  + ++++ G  P+  T S L+    +   V  A+ L+  +   G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            +P++V YN ++ G CK G   +A+  F  +   G   + V+YN L+  LC  GRW +A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L+ +M   D  P ++T+  +I      GK   A+K+ +EM +    P   +YN +I  L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C  G+VD   + LD M  + C P+  TYN L    C   +V E   + + +  +      
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  +I    + G+   A ++   M      P+  TYS L+ GLCM   +E+AL +F  
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFEN 406

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M++ + + D+  +N ++ G+CK    + + ++F+ +  KG  P+  +YT ++ G   + +
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466

Query: 533 LELSAEVLKELQ 544
            + S  + +++Q
Sbjct: 467 WDKSDLLYRKMQ 478



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 174/368 (47%), Gaps = 6/368 (1%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           NL + +    ++IQ   +P+   +S +L    K +     + L   +   G   +L SYN
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           +++  LC+  R   A+     +   G+EP+VV+ + L+   C   R  +A +L+++M+  
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P +V YN +I      G  + A+++ D M +   R  A +YN ++A LC  G+    
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 363 VKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVIT 420
            + +  M  R   PN  T+   + +    GK  EA  + + +  ++   P  F Y  +I 
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLIN 287

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            LC  G+  +A Q+L  M   G  PD  TY++LI G C    ++E  ++F  M +     
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D   +N ++ G  ++ R D + E+F  M  +   PN  TY+IL+ G+     +E +  + 
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLF 404

Query: 541 KELQLRQV 548
           + +Q  ++
Sbjct: 405 ENMQKSEI 412



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P++V ++ +L+ + K    +  I  F  +   G   ++ SYNI++  LC   R+  A  +
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           + +M      P +VT + LI       +   A+ ++ +M +  FRP    YN II   C 
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            G V+  V+  D+M     + +  TYN L                               
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSL------------------------------- 215

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
              +  LC  G+   A +L+ +M      P+  T++++I     EG   EA++++  M  
Sbjct: 216 ---VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               PDV  +N+L+ GLC   R D + ++  +M+ KG +P+  TY  L+ G      ++ 
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332

Query: 536 SAEVLKELQLRQVVSESAVERLVMQYDFEG 565
             ++ +E+  R +V ++     ++Q  F+ 
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQA 362


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 207/448 (46%), Gaps = 36/448 (8%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A KV + M  +G+ PD  S+  LV   C++G V     L+  M  YG+  +  T   +VR
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 224

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            LC  G      +F  R+++ G  PN   Y+  ++   K R V  A  +L++++ +G KP
Sbjct: 225 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 284

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           N+ ++  L+ GLCK G TE A R F  L  S  ++PNV +Y +++   C EG+   A  L
Sbjct: 285 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 344

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L  M      P   TY  LIG     G  D A +++++M +  F P+  +YN +I   C 
Sbjct: 345 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 404

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           +                                  GK+QEA+ +++   ++     +  Y
Sbjct: 405 K----------------------------------GKIQEAYKVLRMATSQGLKFDKITY 430

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +IT  C++G    A  L   M + G  PD   Y+SLI   C +  +EE+ + F     
Sbjct: 431 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 490

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P    + +++ G CK  R+ L+L VF+ M++ G   +  TY  L+ G+  +  LE 
Sbjct: 491 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLE- 549

Query: 536 SAEVLKELQLRQVVSESAVERLVMQYDF 563
            A+ L E  L + +    V R+ + +++
Sbjct: 550 EAKALYEGMLDKRLVPCEVTRVTLTFEY 577



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 205/457 (44%), Gaps = 5/457 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  PD      L+   C+  K+++   ++  M   G   D ++ T +V  LC+KG 
Sbjct: 172 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 231

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
                +   +M + G P N V Y + + GLC    + Q+   L+ ++ +GL PN +T++ 
Sbjct: 232 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 291

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           L++   K      A +L   +I     KPN+ +Y V++ G C+EG+   A      +  +
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 351

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G +PN  +Y  L+   C  G ++ A EL+ +M      P I TYN +I      GK   A
Sbjct: 352 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 411

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
            KVL        +    +Y  +I   C +G +   +   D+M    C P+   Y  L + 
Sbjct: 412 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 471

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C   +++E+               ++ Y  +I   C+ G++  A ++   M + G   D
Sbjct: 472 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFAD 531

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           S TY +LI GLC E  +EEA  ++  M +    P       L    C+  +T +++ V  
Sbjct: 532 SITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLD 591

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + ++ Q+    T  ++V  ++   +++ ++  LK++
Sbjct: 592 RLDKRQQVH---TVDVVVRKLSALGDVDAASLFLKKV 625



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 208/437 (47%), Gaps = 7/437 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  D      RM+  G  P+VV  T  +  LCK   +K+A  V+E MV  G+ P+  ++T
Sbjct: 231 RFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHT 290

Query: 138 YLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            L++ LCK G    A +L  K+ +   Y  N  TY  ++ G C  G L ++   L R+++
Sbjct: 291 TLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 350

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +GL PN  TY+ L+    K      A +L++ +  +G  PN+ +YN ++ G CK+G+ +E
Sbjct: 351 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 410

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A +  R   S+G + + ++Y IL+   C +G    A +L   M      P I  Y  LI 
Sbjct: 411 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 470

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +     + + + K  D+ +     P+  +Y  +IA  C  G+  L ++  ++M    C  
Sbjct: 471 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFA 530

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT-SLCRKGKTYQAFQL 434
           +  TY  L + LC   +++EA A+ + + +K+   P E  +  +T   CR+ KT  A  +
Sbjct: 531 DSITYGALISGLCKESRLEEAKALYEGMLDKR-LVPCEVTRVTLTFEYCRREKTSIAVSV 589

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L  + K       +T   ++R L   G ++ A      + + DY  D   +   +    +
Sbjct: 590 LDRLDK---RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYE 646

Query: 495 SRRTDLSLEVFQMMIEK 511
           + R  L+ E+ +   +K
Sbjct: 647 NNRYALASEMSEKFSKK 663



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 3/314 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ KL  A + L RMV +G KP+    T L+   CK     +A ++M  M   G +P+  
Sbjct: 334 REGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIY 393

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  CKKG +  A +++      G   + +TY  L+   C  G++  +L   DR+
Sbjct: 394 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 453

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+   Y+ L+    ++R +  + K  D  +  G  P   +Y  ++ G CK GR+
Sbjct: 454 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 513

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+R F  +   G   + ++Y  L+  LC E R EEA  L   M      P  VT   L
Sbjct: 514 TLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTL 573

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                   KT  A+ VLD + K   R    + + ++ +L + G VD     L ++     
Sbjct: 574 TFEYCRREKTSIAVSVLDRLDK---RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDY 630

Query: 375 KPNEGTYNGLAMLC 388
             +  TY G    C
Sbjct: 631 AVDHATYTGFINSC 644


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 232/488 (47%), Gaps = 27/488 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL+ A   + +M   G  P V+  T L+   CK ++   A ++ EMM  +G+ PD  
Sbjct: 505 QDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQ 564

Query: 135 SYTYLVNCLCKKGNVGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +Y  L + LCK G    A   LV K    G     VTY SLV G    GN + +   +++
Sbjct: 565 AYNVLTDALCKSGRAEEAYSFLVRK----GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK 620

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ +G   + +TYS LL+A  K++ ++ A+ +LD +   G K N+V+Y ++++ + KEG+
Sbjct: 621 MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A   F ++ S G +P+  +Y + + S C  G+ EEA  L+ EM+    +P +VTY+I
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHI 740

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR----------------LCSEG 357
            I    + G  D A   L  MV     P+  +Y  ++                  + +  
Sbjct: 741 FINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWI 800

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           +++ V + L++M      P   TY+ + A  C   +++EA  ++  +  K  S  +E Y 
Sbjct: 801 ELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYT 860

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I   C      +    + +M ++GF P   +Y  LI GLC EG  + A  +F  +   
Sbjct: 861 MLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGM 920

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           DY  +   +  L  GL K+   D   ++   M  +    +  +Y++L + I      E S
Sbjct: 921 DYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIR-----EAS 975

Query: 537 AEVLKELQ 544
             V+ EL+
Sbjct: 976 GSVVSELR 983



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 227/490 (46%), Gaps = 21/490 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL++A   L   +++G  P V+  TNL+   CKA ++  A++V   M+SS    D  +Y 
Sbjct: 368 KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYG 427

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N L KK  +  A + + +M   G   N V Y S++ G C +G +  +L+    +  +
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHE 487

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PNA+TY  L+    +++ +H AM L+  +   G  P +++Y  L+ G CK+   + A
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNA 547

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R F  +   G  P+  +YN+L  +LC  GR EEA   L          T VTY  L+  
Sbjct: 548 FRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDG 604

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +  G TD A  ++++MV    +    +Y+ ++  LC + K++  +  LDQM     K N
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 378 EGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              Y   ++ +   GK   A ++   + +  +      Y   I+S C+ G+  +A  L+ 
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIG 724

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL-----LG 491
           EM + G TPD  TY   I G    G ++ A      M +   +P+   +  LL     + 
Sbjct: 725 EMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784

Query: 492 LCKSRRTDLS-----------LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           L  +   D S            ++ + M++ G  P   TY+ ++ G      LE  A VL
Sbjct: 785 LINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLE-EACVL 843

Query: 541 KELQLRQVVS 550
            +  L + +S
Sbjct: 844 LDHMLGKAIS 853



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 218/462 (47%), Gaps = 42/462 (9%)

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           K+   +V  G++PD  +Y  ++   CKKG++  A +    + + G   +T T N+L+ G 
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C   +L ++   L  +   G   N ++Y+ L++  Y+ R V  A+ L+  ++  G   NL
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
             Y +L+ GLCKEGR  +A     ++P +G  P+V +YN ++   C  GR ++A  + A 
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M+    +P   TYN LI  L   GK D A ++L+  +   F P+  ++  +I   C   +
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 359 VD---------------------------LVVKC--------LDQMFHRRCKPNEGTYNG 383
           +D                           L+ KC        L++MF     PN   Y  
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTS 463

Query: 384 LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKY 441
           +    C VG V  A  + + L   +   P  + Y  +I  L +  K ++A  L+ +M + 
Sbjct: 464 IIDGYCKVGMVGAALEVFK-LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED 522

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G TP    Y++LI+G C +   + A  +F +ME+    PD   +N L   LCKS R +  
Sbjct: 523 GITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAE-- 580

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            E +  ++ KG +  + TYT LV+G +     + +A +++++
Sbjct: 581 -EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 621



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 226/506 (44%), Gaps = 40/506 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   L  A   L  M   G + +    T L+  L +A  +++A+ ++ MMV  G   +  
Sbjct: 226 RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLH 285

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L+  LCK+G +  A  L+++M   G   +  TYN+++ G C  G +  +L     +
Sbjct: 286 MYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q G  P+ +TY+ L+      + +  A +LL+  IA+G  P ++++  L+ G CK  R 
Sbjct: 346 EQNGCNPDDWTYNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERI 404

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+R   ++ S   + ++ +Y +L+  L  + R +EA E L EM     +P +V Y  +
Sbjct: 405 DDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSI 464

Query: 315 I-------------------------------GSLAY----HGKTDHALKVLDEMVKGRF 339
           I                               GSL Y      K   A+ ++ +M +   
Sbjct: 465 IDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGI 524

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
            P   +Y  +I   C + + D   +  + M      P+E  YN L   LC  G+ +EA++
Sbjct: 525 TPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYS 584

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
               L  K     +  Y  ++    + G T  A  L+ +M   G   D YTYS L++ LC
Sbjct: 585 F---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALC 641

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            +  + EAL I   M     K ++  +  ++  + K  + D +  +F  MI  G  P+ T
Sbjct: 642 KQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSAT 701

Query: 519 TYTILVEGIAHQDELELSAEVLKELQ 544
           TYT+ +       ++E +  ++ E++
Sbjct: 702 TYTVFISSYCKIGQIEEAEHLIGEME 727



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 2/385 (0%)

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
           Y  +L   +   G   +TVTYN+++   C  G+L  + ++   L + G+  + +T + LL
Sbjct: 162 YMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALL 221

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
               +   +  A  LL  +   G + N  SY +L+ GL +     EA+     +   G  
Sbjct: 222 LGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCS 281

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
            N+  Y +L++ LC EGR  +A  LL EM      P++ TYN +I      G+   AL +
Sbjct: 282 LNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI 341

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
              M +    P   +YN +I  LC  GK+D   + L+    R   P   T+  L    C 
Sbjct: 342 KALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCK 400

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
             ++ +A  +  ++ +       + Y  +I  L +K +  +A + L EM   G  P+   
Sbjct: 401 AERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVI 460

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y+S+I G C  G++  ALE+F +ME     P+   + +L+ GL + ++   ++ +   M 
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520

Query: 510 EKGQMPNETTYTILVEGIAHQDELE 534
           E G  P    YT L++G   + E +
Sbjct: 521 EDGITPGVIAYTTLIQGQCKKHEFD 545



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 149/350 (42%), Gaps = 15/350 (4%)

Query: 187 SLQFLDRLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           +L F + + ++ G    A +++ LL+   + R      KL+  +I+  G    V   V  
Sbjct: 69  ALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAV-- 126

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
                     +AI+  R +  K    +   YN+ LRSL      E   +L + +      
Sbjct: 127 ----------DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLL 176

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P  VTYN +I +    G    A +    + +   +    + N ++   C    +      
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L  M    C+ NE +Y  L   L     V+EA  ++  +     S     Y  +I  LC+
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCK 296

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +G+ + A  LL EM   G  P  +TY+++I G C  G +++AL I  +ME+    PD   
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +N+L+ GLC   + D + E+    I +G  P   T+T L+ G    + ++
Sbjct: 357 YNSLIYGLCGG-KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 224/475 (47%), Gaps = 21/475 (4%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M++     + V   N    LC   K  KA +++++M+  G +PD S+Y+ ++  LC+ 
Sbjct: 409 EEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEA 468

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A  L ++M+  G   +  TY  L+   C +G + Q+  + D +   G  P+  TY
Sbjct: 469 MKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTY 528

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR------- 259
           + LL A  K + V  A  +   ++  G  PN ++Y+ L+ GLCK G +++A         
Sbjct: 529 TALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIG 588

Query: 260 ---------FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
                    +F    +    PNVV+Y  L+  LC   +  +A ELL  M      P  + 
Sbjct: 589 TSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHII 648

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI      GK D+A +V   M K  + P+  +Y  +I  +  + ++DL +K L QM 
Sbjct: 649 YDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQML 708

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKT 428
              C PN  TY  +   LC +G+ Q+A  ++ S+  K+  +P    Y  +I  L + GK 
Sbjct: 709 ESSCTPNVVTYTAMIDGLCRIGECQKALKLL-SMMEKRGCNPNVVTYTSLIDGLGKSGKV 767

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             + QL  +M   G  P+  TY  LI   C  GL++EA  +   M++  +   V  + ++
Sbjct: 768 DMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSV 827

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + G   S++   SL + + +   G +     Y +L++  +    LE + E+ KE+
Sbjct: 828 VQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEM 880



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 219/470 (46%), Gaps = 22/470 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  AFL  + M S G  PDV   T L+   CK   +++A    + M S G  P   +YT
Sbjct: 470 KVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYT 529

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI-- 195
            L++   K   V  A  +  +M D G   NT+TY++LV GLC  G   ++ +   ++I  
Sbjct: 530 ALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGT 589

Query: 196 --------------QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
                            + PN  TY  L++   K   V  A +LLD + + G +PN + Y
Sbjct: 590 SDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIY 649

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + L+ G CK G+ + A   F  +   G+ P V +Y  L+ ++  + R + A ++L++M  
Sbjct: 650 DALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE 709

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P +VTY  +I  L   G+   ALK+L  M K    P+  +Y  +I  L   GKVD+
Sbjct: 710 SSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDM 769

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            ++   QM  + C PN  TY  L    C  G + EA +++  +  KQ   P+    Y   
Sbjct: 770 SLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM--KQTYWPKYVQGYCSV 827

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
                 K   +  LL E+  +G    +  Y  LI      G +E+ALE+   M E     
Sbjct: 828 VQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSL 887

Query: 481 DV---DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++   D + +L+  LC + + + + E++  +  KG +P  + +  L++G+
Sbjct: 888 NITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGL 937



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 234/524 (44%), Gaps = 58/524 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            ++A   L RM      P+VV    LL    K  ++    +++ MM++ G  P+ S +  
Sbjct: 290 FDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNS 349

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV----------------------- 175
           LV+  C   +  YA +L+ +M   G P   V YN  +                       
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYE 409

Query: 176 ------------------RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
                             R LC +G  +++ Q +  +++KG VP+  TYS ++    +  
Sbjct: 410 EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM 469

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            V  A  L  ++ + G  P++ +Y +L+   CK G  E+A  +F ++ S G  P+VV+Y 
Sbjct: 470 KVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYT 529

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-- 335
            LL +     +  +A+++   M     +P  +TY+ L+  L   G++  A +V  +M+  
Sbjct: 530 ALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGT 589

Query: 336 --------------KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
                              P+  +Y  +I  LC   KV    + LD M    C+PN   Y
Sbjct: 590 SDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIY 649

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           + L    C VGK+  A  +   +           Y  +I ++ +  +   A ++L +M +
Sbjct: 650 DALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE 709

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
              TP+  TY+++I GLC  G  ++AL++  +ME+    P+V  + +L+ GL KS + D+
Sbjct: 710 SSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDM 769

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           SL++F  MI +G  PN  TY +L+        L+ +  +L E++
Sbjct: 770 SLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 813



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 190/412 (46%), Gaps = 10/412 (2%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V   C+ G    A++ + +++D+GY  +  TYN+LV+ L   G ++   +    + + G
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              + FT     +A  KE     A+ +++    +  K + V    +++GL +    +EAI
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAI 294

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F   +      PNVV+Y  LL     + +      +++ M     +P    +N L+ S 
Sbjct: 295 SFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSY 354

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV---DLVV---KCLDQMFHR 372
                  +A K+L+ M      P    YN  I  +CS  ++   DL+    K  ++M   
Sbjct: 355 CNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLAS 414

Query: 373 RCKPNE-GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C  N+  T N    LCG+GK  +AF II+ +  K        Y  VIT LC   K  +A
Sbjct: 415 SCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKA 474

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F L  EM   G  PD YTY+ LI   C  GLIE+A   F  ME     P V  + ALL  
Sbjct: 475 FLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHA 534

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             K+++   + ++F  M++ G  PN  TY+ LV+G+    E + + EV  ++
Sbjct: 535 YLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 203/446 (45%), Gaps = 55/446 (12%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG----------------I 129
             RMV  G  P+ +  + L+  LCKA + +KA +V   M+ +                 I
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSI 607

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  +Y  L++ LCK   V  A +L++ M   G   N + Y++L+ G C +G L+ + +
Sbjct: 608 APNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQE 667

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              R+ + G +P   TY+ L++A +K+R +  A+K+L  ++     PN+V+Y  ++ GLC
Sbjct: 668 VFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLC 727

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           + G  ++A++    +  +G  PNVV+Y  L+  L   G+ + + +L  +M     +P  V
Sbjct: 728 RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYV 787

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY +LI      G  D A  +L EM +  +      Y  ++                 Q 
Sbjct: 788 TYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVV-----------------QG 830

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           F +                   K   +  +++ L +    S    Y  +I S  + G+  
Sbjct: 831 FSK-------------------KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLE 871

Query: 430 QAFQLLYEMTKYGFT---PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +A +L  EM +   +       TY+SLI+ LC+   +E+A E++  +      P++  F 
Sbjct: 872 KALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFI 931

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKG 512
            L+ GL K  + + +L++   M ++G
Sbjct: 932 CLIKGLIKVNKWNEALQLCYSMCDEG 957



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 131/563 (23%), Positives = 217/563 (38%), Gaps = 92/563 (16%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R      A  +L R+   G++P       L+  L  A +M    +V + M   G   D  
Sbjct: 184 RHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKF 243

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT---------------------------- 166
           +       LCK+G    A+ ++E+ ED+   T                            
Sbjct: 244 TVGCFAQALCKEGRWSDALVMIER-EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRC 302

Query: 167 -----NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
                N VTY +L+ G      L    + +  ++ +G  PN   ++ L+ +    R    
Sbjct: 303 NSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPY 362

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTG---------------------------------- 247
           A KLL+ +   G  P  V YN+ +                                    
Sbjct: 363 AYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVN 422

Query: 248 -------LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
                  LC  G+ ++A +  + +  KGF P+  +Y+ ++  LC   + E+A  L  EM 
Sbjct: 423 TANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMK 482

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P + TY ILI S    G  + A    DEM      PS  +Y  ++       +V 
Sbjct: 483 SVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVP 542

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF----- 414
                  +M    C PN  TY+ L   LC  G+ Q+A  +   +    ++   +F     
Sbjct: 543 QASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGE 602

Query: 415 -----------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                      Y  +I  LC+  K   A +LL  M+  G  P+   Y +LI G C  G +
Sbjct: 603 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKL 662

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           + A E+F  M +  Y P V  + +L+  + K RR DL+++V   M+E    PN  TYT +
Sbjct: 663 DNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAM 722

Query: 524 VEGIAHQDELELSAEVLKELQLR 546
           ++G+    E + + ++L  ++ R
Sbjct: 723 IDGLCRIGECQKALKLLSMMEKR 745



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 168/364 (46%), Gaps = 23/364 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + HK+ DA   L+ M S G +P+ +    L+   CK  K+  A +V   M   G +
Sbjct: 619 DGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYL 678

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +YT L++ + K   +  A++++ +M +     N VTY +++ GLC +G   ++L+ 
Sbjct: 679 PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKL 738

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + ++G  PN  TY+ L++   K   V  +++L   +I +G  PN V+Y VL+   C 
Sbjct: 739 LSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCA 798

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +EA     ++    +   V  Y  +++      ++  +  LL E++          
Sbjct: 799 AGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPV 856

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFR---PSAASYNPIIARLCSEGKVDLVVKCLD 367
           Y +LI S +  G+ + AL++  EM++        S  +Y  +I  LC   +++   +   
Sbjct: 857 YGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYS 916

Query: 368 QMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           ++  +   P    +  + ++ G+ KV           NK N + Q  Y     S+C +G 
Sbjct: 917 EITRKGVVPELSAF--ICLIKGLIKV-----------NKWNEALQLCY-----SMCDEGV 958

Query: 428 TYQA 431
            +Q+
Sbjct: 959 NWQS 962



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 119/295 (40%), Gaps = 6/295 (2%)

Query: 242 NVLLTGLCKEGRTEE-AIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           + ++  + +  RT E  +RFF     + G+      YN L   L  + R      LL E+
Sbjct: 104 DAVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREI 163

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
              DR       N+++     HG    AL+ L  +    +RPS A+YN ++  L + G++
Sbjct: 164 GEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQM 223

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D+  +   +M       ++ T    A  LC  G+  +A  +I+    K ++        +
Sbjct: 224 DMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTV---LCTQM 280

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I+ L       +A   L+ M      P+  TY +L+ G   +  +     I  +M     
Sbjct: 281 ISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGC 340

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            P+   FN+L+   C +R    + ++   M   G  P    Y I +  I   +EL
Sbjct: 341 NPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEEL 395



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 134/355 (37%), Gaps = 49/355 (13%)

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YN L   L  + R     R  R++     E      N+++R  C  G W +A E L  + 
Sbjct: 140 YNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLK 199

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK-- 358
                P+  TYN L+  LA  G+ D   +V  EM +  F     +       LC EG+  
Sbjct: 200 DFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWS 259

Query: 359 ------------------------------VDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
                                          D  +  L +M    C PN  TY  L  L 
Sbjct: 260 DALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTL--LA 317

Query: 389 GVGKVQE---AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
           G  K ++      II  + N+  +     +  ++ S C       A++LL  M   G  P
Sbjct: 318 GFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPP 377

Query: 446 DSYTYSSLIRGLC---------MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
               Y+  I  +C         +  L E+  E  +       K +  NF   L G+ K  
Sbjct: 378 GYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK-- 435

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             D + ++ ++M+ KG +P+ +TY+ ++  +    ++E +  + +E++   V+ +
Sbjct: 436 -FDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPD 489


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 240/498 (48%), Gaps = 23/498 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A     ++   G  P VV  + LL+ LC  +++ +A+ +   M      P+  ++T
Sbjct: 128 KLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFT 183

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LC++G V  A+ L+++M + G   N +TY ++V G+C +G+   +L  L ++ + 
Sbjct: 184 TLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 243

Query: 198 GLV-PNAFTY-----SFLLEAAYKERGVHAAMKLLDDIIA-KGGKPNLVSYNVLLTGLCK 250
             + PN   +     + ++           A +LL +++  K   P++V+YN L+    K
Sbjct: 244 SHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVK 303

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG+  EA   + ++  +G  P+ ++Y+ ++   C + R + A  +   M     SP I+T
Sbjct: 304 EGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIIT 363

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +N LI       + D  +K+L EM +     +  +Y  +I   C  G ++     L +M 
Sbjct: 364 FNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMV 423

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQ----NSSP-------QEFYKYV 418
                PN  T N L   LC  GK+++A  + +++   +     S P        + Y  +
Sbjct: 424 SSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNIL 483

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I+ L  +GK  +A +L  EM   G  PD+ TY+S+I GLC +  ++EA ++F  M    +
Sbjct: 484 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSF 543

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P+V  F  L+ G CK+ R D  LE+F  M  +G + N  TY  L+ G      +  + +
Sbjct: 544 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALD 603

Query: 539 VLKELQLRQVVSESAVER 556
           + +E+    V  ++   R
Sbjct: 604 IFQEMMASGVYPDTITIR 621



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 230/489 (47%), Gaps = 23/489 (4%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    L DA      MV     P V+    L+  + +  ++   I +   M    +  +A
Sbjct: 54  HEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNA 113

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+T L+ C C    + +A+    K+   G+    VT+++L+ GLC+   ++++L    +
Sbjct: 114 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQ 173

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +    PN  T++ L+    +E  V  A+ LLD ++  G +PN ++Y  ++ G+CK G 
Sbjct: 174 MCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 229

Query: 254 TEEAIRFFRDLPS-KGFEPNVVSYNI-----LLRSLCMEGRWEEANELLAEM-DGGDRSP 306
           T  A+   R +      +PNVV + +     ++   C  GRW EA +LL EM +    SP
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            +VTYN LI +    GK   A ++ DEM+     PS  +Y+ +I   C + ++D      
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349

Query: 367 DQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             M  + C P+  T+N L A  C   +V +   ++  +      +    Y  +I   C+ 
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-------- 477
           G    A  LL EM   G  P+  T ++L+ GLC  G +++ALE+F  M++          
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469

Query: 478 ---YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               +PDV  +N L+ GL    +   + E+++ M  +G +P+  TY  ++ G+  Q  L+
Sbjct: 470 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLD 529

Query: 535 LSAEVLKEL 543
            + ++   +
Sbjct: 530 EATQMFDSM 538



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 235/470 (50%), Gaps = 19/470 (4%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP+VV  T L+  LC+  ++ +A+ +++ M+  G+ P+  +Y  +V+ +CK G+   A+ 
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235

Query: 155 LVEKMEDYGY-PTNTVTY-----NSLVRGLCMLGNLNQSLQFLDRLIQ-KGLVPNAFTYS 207
           L+ KME+  +   N V +       ++ G C  G  +++ Q L  +++ K + P+  TY+
Sbjct: 236 LLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYN 295

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+ A  KE     A +L D+++ +G  P+ ++Y+ ++ G CK+ R + A   F  + +K
Sbjct: 296 ALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATK 355

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+++++N L+   C   R ++  +LL EM         +TY  LI      G  + A
Sbjct: 356 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 415

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-----------CKP 376
             +L EMV     P+  + N ++  LC  GK+   ++    M   +            +P
Sbjct: 416 QDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEP 475

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TYN L + L   GK  EA  + + + ++        Y  VI  LC++ +  +A Q+ 
Sbjct: 476 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMF 535

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M    F+P+  T+++LI G C  G +++ LE+F  M       +   +  L+ G  K 
Sbjct: 536 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKV 595

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
              + +L++FQ M+  G  P+  T   ++ G+  ++EL+ +  +L++LQ+
Sbjct: 596 GNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 213/441 (48%), Gaps = 6/441 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM----MVSSGIIPDASSYTYLVNCLC 144
           MV + H   +V  T  L  + K       ++  E+    M   G+ PD+ SY  +V   C
Sbjct: 157 MVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYC 216

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K GN+  A + +  M + G+  +  T+  ++      G   ++L +  RL+  GL PN  
Sbjct: 217 KIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLI 276

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            ++ ++E   K   +  A ++L++++ KG KPN+ ++  L+ GLCK+G TE+A R F  L
Sbjct: 277 NFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKL 336

Query: 265 -PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
             S+  +PNV++Y  ++   C E +   A  LL+ M      P   TY  LI      G 
Sbjct: 337 VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGN 396

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            + A  +++ M    F P+  +YN I+  LC  G+V    K L+  F    KP++ TYN 
Sbjct: 397 FERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNI 456

Query: 384 L-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L +  C    +++A A+   +           Y  +I   CR+ +  ++     E  + G
Sbjct: 457 LMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIG 516

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             P + TY+S+I G C EG +  A++ F  + ++   PD   + A++ GLCK  + D + 
Sbjct: 517 IIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEAR 576

Query: 503 EVFQMMIEKGQMPNETTYTIL 523
            ++  MIEKG +P E T   L
Sbjct: 577 SLYDSMIEKGLVPCEVTRITL 597



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 228/461 (49%), Gaps = 13/461 (2%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +  ++K+A++++  M + G++P+  +  +++    + G V YA  L E+M   G   +++
Sbjct: 147 EVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSI 206

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE----AAYKERGVHAAMKL 225
           +Y  +V   C +GN+ ++ ++L  ++++G V +  T++ ++       Y  R +    +L
Sbjct: 207 SYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRL 266

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           +D     G +PNL+++  ++ GLCK G  ++A     ++  KG++PNV ++  L+  LC 
Sbjct: 267 VD----MGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCK 322

Query: 286 EGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
           +G  E+A  L  ++    +  P ++TY  +I       K + A  +L  M +    P+  
Sbjct: 323 KGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTN 382

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSL 403
           +Y  +I   C  G  +     ++ M      PN  TYN +   LC  G+VQEA+ +++  
Sbjct: 383 TYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLED- 441

Query: 404 GNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           G +    P +F Y  +++  C++    QA  L  +M K G  PD ++Y++LI   C E  
Sbjct: 442 GFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENR 501

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++E+   F         P    + +++ G C+     L+++ F  + + G  P+  TY  
Sbjct: 502 MKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGA 561

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
           ++ G+  Q + +  A  L +  + + +    V R+ + Y++
Sbjct: 562 IISGLCKQSKRD-EARSLYDSMIEKGLVPCEVTRITLAYEY 601



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 187/403 (46%), Gaps = 26/403 (6%)

Query: 12  ANPSPEPFRKAYGFYSQIPNLH------SFSLNKGFIRVLASTQVTISPKDSVYTKPNRK 65
             P    +R     Y +I N+       S  L +GF+   A+  + IS          R 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIIS----------RF 250

Query: 66  PGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
            G    TR        A     R+V  G +P+++  T ++  LCK   +K+A +++E MV
Sbjct: 251 SGKGYTTR--------ALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMV 302

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNL 184
             G  P+  ++T L++ LCKKG    A +L  K+     +  N +TY +++ G C    L
Sbjct: 303 GKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKL 362

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           N++   L R+ ++GLVPN  TY+ L++   K      A  L++ + ++G  PNL +YN +
Sbjct: 363 NRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAI 422

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + GLCK GR +EA +   D    G +P+  +YNIL+   C +    +A  L  +M     
Sbjct: 423 VNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGI 482

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P I +Y  LI       +   +    +E V+    P+  +Y  +I   C EG + L +K
Sbjct: 483 QPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMK 542

Query: 365 CLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNK 406
              ++    C P+  TY   ++ LC   K  EA ++  S+  K
Sbjct: 543 FFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEK 585



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 149/308 (48%), Gaps = 1/308 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGIIPDASSYT 137
           +  AF  LE MV KG KP+V   T+L+  LCK    +KA ++ ++++ S    P+  +YT
Sbjct: 291 IKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYT 350

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  C++  +  A  L+ +M++ G   NT TY +L+ G C  GN  ++   ++ +  +
Sbjct: 351 AMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSE 410

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  TY+ ++    K   V  A K+L+D    G KP+  +YN+L++  CK+    +A
Sbjct: 411 GFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQA 470

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +   G +P++ SY  L+   C E R +E+     E       PT  TY  +I  
Sbjct: 471 LALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICG 530

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A+K    +      P + +Y  II+ LC + K D      D M  +   P 
Sbjct: 531 YCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPC 590

Query: 378 EGTYNGLA 385
           E T   LA
Sbjct: 591 EVTRITLA 598



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 35/245 (14%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ KLN A + L RM  +G  P+    T L+   CKA   ++A  +M +M S G  P+  
Sbjct: 358 REDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLC 417

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL------ 188
           +Y  +VN LCK+G V  A +++E     G   +  TYN L+   C   N+ Q+L      
Sbjct: 418 TYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM 477

Query: 189 -----------------------------QFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
                                         F +  ++ G++P   TY+ ++    +E  +
Sbjct: 478 LKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNL 537

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             AMK    +   G  P+ ++Y  +++GLCK+ + +EA   +  +  KG  P  V+   L
Sbjct: 538 TLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITL 597

Query: 280 LRSLC 284
               C
Sbjct: 598 AYEYC 602



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 61  KPNRKPGNNNDTRH-RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK 119
           KP++   N   + H +   +  A     +M+  G +PD+   T L+   C+ N+MK++  
Sbjct: 448 KPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEM 507

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
             E  V  GIIP   +YT ++   C++GN+  AM+   ++ D+G   +++TY +++ GLC
Sbjct: 508 FFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLC 567

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFT 205
                +++    D +I+KGLVP   T
Sbjct: 568 KQSKRDEARSLYDSMIEKGLVPCEVT 593



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 2/174 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A+  LE     G KPD      L+ + CK   +++A+ +   M+  GI PD  SYT
Sbjct: 431 RVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYT 490

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            L+   C++  +  +    E+    G  PTN  TY S++ G C  GNL  +++F  RL  
Sbjct: 491 TLIAVFCRENRMKESEMFFEEAVRIGIIPTNK-TYTSMICGYCREGNLTLAMKFFHRLSD 549

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            G  P++ TY  ++    K+     A  L D +I KG  P  V+   L    CK
Sbjct: 550 HGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 62/122 (50%)

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +GN+ +    E  + ++ S    G+  +A +++ EM   G  P++ T + +I+     GL
Sbjct: 126 IGNRNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGL 185

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +E A  +F  M     +PD  ++  +++  CK      + +   +M+E+G + +  T+T+
Sbjct: 186 VEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTL 245

Query: 523 LV 524
           ++
Sbjct: 246 II 247


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 229/463 (49%), Gaps = 5/463 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E +V +G   D      ++  LC   ++++   ++E     G +P A  Y  L++  C++
Sbjct: 71  EMLVREGGADDYSTCV-MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRR 129

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G++G  + L+ +ME  G     VTY +++  L   G+L +    L  +  +GL PN   Y
Sbjct: 130 GDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIY 189

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++ A  K R    A  +L+ ++     P++V++N ++ G C+EG   EA++  R+   
Sbjct: 190 NTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIR 249

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G EPN +SY  L+   C+ G    A++LL EM G   +P ++T   LI  L   G+ + 
Sbjct: 250 RGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVND 309

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           AL V ++M + +  P A  YN +I+ LC +  +      L++M  ++ +P++  Y  L  
Sbjct: 310 ALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLID 369

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                 K+ +A  I + +  ++ + P    Y  +I   C+ G   +A   +  M K G  
Sbjct: 370 GFVRSDKLSDARKIFEFM--EEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCI 427

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD +TY++L+ G   +G I  +L +   M +   KP++  + +L+ G C    T  + ++
Sbjct: 428 PDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDL 487

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           F  M  +G  PN   YT+L+  +  +D++  +A   + + L  
Sbjct: 488 FAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNH 530



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 214/515 (41%), Gaps = 56/515 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R   +    L L  M +KG  P VV    +++ L +   + K   ++  M + G+ 
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  ++N LCK  +   A  ++ +M    +  + VT+N+++ G C  G++ ++L+ 
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L   I++GL PN  +Y+ L+           A  LL +++ +G  P++++   L+ GL  
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----------- 299
            G+  +A+     +  +   P+   YN+L+  LC +     A  LL EM           
Sbjct: 304 SGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFI 363

Query: 300 -----DGGDRS------------------PTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
                DG  RS                  P IV YN++I      G    A+  +  M K
Sbjct: 364 YTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRK 423

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQE 395
               P   +Y  ++     +G +   ++ L  M  RRCKPN  TY  L    C +G    
Sbjct: 424 AGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYS 483

Query: 396 A---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           A   FA +QS G   N      Y  +I SL +K K  QA      M      P+  T   
Sbjct: 484 AEDLFAKMQSEGLFPNVV---HYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHY 540

Query: 453 LIRGL--CMEGLIEE-------------ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           L+ GL  C  G++                L++F  +      P +  +NA++  LC+   
Sbjct: 541 LVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNM 600

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
              ++++   M  KG +P+  T+  L+ G +   E
Sbjct: 601 LGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGE 635



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 207/446 (46%), Gaps = 4/446 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E    +G  P  V    L+   C+   + + + ++  M + GIIP   +Y  +++ L +
Sbjct: 104 IEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGR 163

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG++     L+ +M   G   N   YN+++  LC   + +Q+   L+++++    P+  T
Sbjct: 164 KGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVT 223

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ ++    +E  V  A+KLL + I +G +PN +SY  L+ G C  G    A     ++ 
Sbjct: 224 FNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMM 283

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G  P++++   L+  L + G+  +A  +  +M      P    YN+LI  L       
Sbjct: 284 GRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLS 343

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L+EM++ + +P    Y  +I       K+    K  + M  + C P+   YN + 
Sbjct: 344 AAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMI 402

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C  G ++EA   + S+  K    P EF Y  ++    +KG    + +LL +M K   
Sbjct: 403 KGYCKFGMMKEAVTCMSSM-RKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRC 461

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+ +TY+SLI G C  G    A ++F  M+     P+V ++  L+  L K  +   +  
Sbjct: 462 KPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAA 521

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAH 529
            F+ M+     PN+ T   LV G+ +
Sbjct: 522 YFEHMLLNHCPPNDATVHYLVNGLVN 547



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 149/324 (45%), Gaps = 1/324 (0%)

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A  L  +++ + G  +  S  V++ GLC EGR EE          +G  P  V YN+L+ 
Sbjct: 65  ARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLID 124

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  G       LL EM+     PT+VTY  +I  L   G       +L EM      P
Sbjct: 125 GYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSP 184

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAII 400
           +   YN +I  LC           L+QM   R  P+  T+N + A  C  G V+EA  ++
Sbjct: 185 NVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLL 244

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           +    +     Q  Y  +I   C +G+   A  LL EM   G TPD  T  +LI GL + 
Sbjct: 245 REAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVS 304

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G + +AL +   M E    PD + +N L+ GLCK R    +  + + M+E+   P++  Y
Sbjct: 305 GQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIY 364

Query: 521 TILVEGIAHQDELELSAEVLKELQ 544
           T L++G    D+L  + ++ + ++
Sbjct: 365 TTLIDGFVRSDKLSDARKIFEFME 388



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 16/265 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL+DA    E M  K   PD+V    ++   CK   MK+A+  M  M  +G IPD  
Sbjct: 373 RSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEF 431

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT LV+   KKG++  +++L+  M       N  TY SL+ G C +G+   +     ++
Sbjct: 432 TYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKM 491

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL--CKEG 252
             +GL PN   Y+ L+ + +K+  V  A    + ++     PN  + + L+ GL  C+ G
Sbjct: 492 QSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHG 551

Query: 253 -------RTEEA------IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
                   T++A      +  FR L S G +P + +YN ++ SLC      +A +L  +M
Sbjct: 552 MVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKM 611

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKT 324
                 P  +T+  L+   +  G++
Sbjct: 612 SNKGCLPDPITFLSLLYGFSSAGES 636



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 34/280 (12%)

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           S  +++R LC+EGR EE   L+    G    P  V YN+LI      G     L +L EM
Sbjct: 83  STCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEM 142

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ 394
                 P+  +Y  II  L  +G +  V   L +M  R   PN   YN            
Sbjct: 143 ETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYN------------ 190

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
                                  VI +LC+     QA  +L +M K  F PD  T++++I
Sbjct: 191 ----------------------TVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMI 228

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G C EG + EAL++         +P+  ++  L+ G C      ++ ++   M+ +G  
Sbjct: 229 AGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHT 288

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           P+  T   L+ G+    ++  +  V +++  RQV+ ++ +
Sbjct: 289 PDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANI 328


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 215/441 (48%), Gaps = 37/441 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
             R+   G K  +     LL  L K N+  +   V + M+   I P+ +++   +N LCK
Sbjct: 153 FRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCK 212

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM---LGNLNQSLQFLDRLIQKGLVPN 202
            G +  A  ++E ++ +G+  N VTYN+L+ G C     G + ++   L  ++   + PN
Sbjct: 213 AGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPN 272

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             T++ L++   K+  V AA    +++  +G KPN+V+YN L+ GL   G+ +EAI  + 
Sbjct: 273 EITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWD 332

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +   G +PN+V++N L+   C +   +EA +L  ++   D  P  +T+N +I +    G
Sbjct: 333 KMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAG 392

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             +    + + M+     P+ ++YN +IA LC    V    K L++M +   K +  TYN
Sbjct: 393 MMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYN 452

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L                                  I   C+ G+  +A +LL EM   G
Sbjct: 453 IL----------------------------------IGGWCKDGEPSKAEKLLGEMLNVG 478

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             P+  TY++L+ G CMEG ++ AL++   ME+   + +V  +N L+ G CK+ + + + 
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDAN 538

Query: 503 EVFQMMIEKGQMPNETTYTIL 523
            +   M+EKG  PN TTY ++
Sbjct: 539 RLLNEMLEKGLNPNRTTYDVV 559



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 184/373 (49%), Gaps = 20/373 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCK---ANKMKKAIKVMEMMVSSGIIPDAS 134
           KLN A   +E + + G  P++V    L+   CK   A KM +A  +++ M+++ I P+  
Sbjct: 215 KLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEI 274

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++  CK  NV  A    E+M+  G   N VTYNSL+ GL   G L++++   D++
Sbjct: 275 TFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM 334

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GL PN  T++ L+    K++ +  A KL DDI  +   PN +++N ++   CK G  
Sbjct: 335 VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMM 394

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EE       +  +G  PNV +YN L+  LC       A +LL EM+  +    +VTYNIL
Sbjct: 395 EEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNIL 454

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG     G+   A K+L EM+    +P+  +YN ++   C EG +   +K   QM     
Sbjct: 455 IGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGK 514

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           + N  TYN L    C  GK+++A  ++  +  K               L     TY   +
Sbjct: 515 RANVVTYNVLIKGFCKTGKLEDANRLLNEMLEK--------------GLNPNRTTYDVVR 560

Query: 434 LLYEMTKYGFTPD 446
           L  EM + GF PD
Sbjct: 561 L--EMLEKGFIPD 571



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 203/423 (47%), Gaps = 11/423 (2%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           ++ +I D     Y+ N       +  A ++  +++DYG+  +  + N L+  L + GN  
Sbjct: 128 ANALITDMLVLAYVTNL-----EIHSACEVFRRVQDYGFKLSLNSCNPLLSAL-VKGNET 181

Query: 186 QSLQFL-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
             +Q++   +I++ + PN  T++  +    K   ++ A  +++DI A G  PN+V+YN L
Sbjct: 182 GEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTL 241

Query: 245 LTGLCKEGRTEEAIR---FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + G CK+G   +  R     +++ +    PN +++N L+   C +     A     EM  
Sbjct: 242 IDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQR 301

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P IVTYN LI  L+ +GK D A+ + D+MV    +P+  ++N +I   C +  +  
Sbjct: 302 QGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKE 361

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
             K  D +  +   PN  T+N +    C  G ++E FA+  S+ ++        Y  +I 
Sbjct: 362 ARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIA 421

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            LCR      A +LL EM  Y    D  TY+ LI G C +G   +A ++   M     KP
Sbjct: 422 GLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKP 481

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +   +N L+ G C       +L+V   M ++G+  N  TY +L++G     +LE +  +L
Sbjct: 482 NHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLL 541

Query: 541 KEL 543
            E+
Sbjct: 542 NEM 544



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 154/346 (44%), Gaps = 37/346 (10%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           NA     L+ A      +H+A ++   +   G K +L S N LL+ L K   T E    +
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS---L 318
           +++  +  +PN+ ++NI +  LC  G+  +A +++ ++     SP IVTYN LI      
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A  +L EM+  +  P+  ++N +I   C +  V       ++M  +  KPN 
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            TYN L                                  I  L   GK  +A  L  +M
Sbjct: 309 VTYNSL----------------------------------INGLSNNGKLDEAIALWDKM 334

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  P+  T+++LI G C + +I+EA ++F  + E D  P+   FN ++   CK+   
Sbjct: 335 VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMM 394

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +    +   M+++G  PN +TY  L+ G+     +  + ++L E++
Sbjct: 395 EEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEME 440



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 5/254 (1%)

Query: 301 GGDR-SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           GGDR     +  ++L+ +   + +   A +V   +    F+ S  S NP+++ L    + 
Sbjct: 122 GGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNET 181

Query: 360 DLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
             +     +M  RR +PN  T+N  +  LC  GK+ +A  +I+ +     S     Y  +
Sbjct: 182 GEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTL 241

Query: 419 ITSLCRKG---KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           I   C+KG   K Y+A  +L EM      P+  T+++LI G C +  +  A   F  M+ 
Sbjct: 242 IDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQR 301

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              KP++  +N+L+ GL  + + D ++ ++  M+  G  PN  T+  L+ G   +  ++ 
Sbjct: 302 QGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKE 361

Query: 536 SAEVLKELQLRQVV 549
           + ++  ++  + +V
Sbjct: 362 ARKLFDDIAEQDLV 375


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 209/444 (47%), Gaps = 1/444 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + NDA     RMV     P ++  T LL  + K N+    I + E M   GI P   +  
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++C+C       A   + KM   G+  + VT+ SL+ G C    +  ++   D+++  
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  TY+ L+    K R ++ A++L + +   G +PN+V+YN L+TGLC+ GR  +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               RD+  +  EPNV+++  L+ +    G+  EA EL   M      P + TY  LI  
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +G  D A ++   M +    P+   Y  +I   C   +V+  +K   +M  +    N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L    C VG+   A  +   + +++       Y  ++  LC  GK  +A  +  
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M K     +  TY+ +I+G+C  G +E+A ++F  +     KP+V  +  ++ G C+  
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482

Query: 497 RTDLSLEVFQMMIEKGQMPNETTY 520
               +  +F+ M E G +PNE+ Y
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 204/433 (47%), Gaps = 1/433 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           +   A+ +   MV S  +P    +T L++ + K       + L E+M+  G P    T N
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            ++  +C+     ++  FL ++++ G  P+  T++ LL        +  A+ L D I+  
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KPN+V+Y  L+  LCK      A+  F  + + G  PNVV+YN L+  LC  GRW +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL +M      P ++T+  LI +    GK   A ++ + M++    P   +Y  +I  
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
           LC  G +D   +    M    C PNE  Y  L    C   +V++   I   +  K   + 
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I   C  G+   A ++  +M+     PD  TY+ L+ GLC  G +E+AL IF 
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M + +   ++  +  ++ G+CK  + + + ++F  +  KG  PN  TYT ++ G   + 
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482

Query: 532 ELELSAEVLKELQ 544
            +  +  + K+++
Sbjct: 483 LIHEADSLFKKMK 495



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 170/365 (46%), Gaps = 36/365 (9%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            N +L    R++    +P+   ++ LL    K       + L + +   G  P L + N+
Sbjct: 64  FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++  +C   +   A  F   +   GFEP++V++  LL   C   R E+A  L  ++ G  
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY  LI  L  +   +HA+++ ++M     RP+  +YN ++  LC  G+     
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
             L  M  RR +PN  T+  L      VGK+ EA               +E Y  +I   
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA---------------KELYNVMI--- 285

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
                         +M+ Y   PD +TY SLI GLCM GL++EA ++F +ME     P+ 
Sbjct: 286 --------------QMSVY---PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +  L+ G CKS+R +  +++F  M +KG + N  TYT+L++G       +++ EV  +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388

Query: 543 LQLRQ 547
           +  R+
Sbjct: 389 MSSRR 393



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 143/307 (46%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  LN A     +M + G +P+VV    L+  LC+  +   A  ++  M+   I P+  
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++   K G +  A +L   M       +  TY SL+ GLCM G L+++ Q    +
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G  PN   Y+ L+    K + V   MK+  ++  KG   N ++Y VL+ G C  GR 
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A   F  + S+   P++ +YN+LL  LC  G+ E+A  +   M   +    IVTY I+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +   GK + A  +   +     +P+  +Y  +I+  C  G +        +M     
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499

Query: 375 KPNEGTY 381
            PNE  Y
Sbjct: 500 LPNESVY 506


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 217/476 (45%), Gaps = 35/476 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA      MV     P VV  T LL  +    + +  I   + M   GI  D  S+T
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++C C+   +  A+ ++ KM   GY  + VT+ SL+ G C+   ++ +   +  +++ 
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEE 256
           G  PN   Y+ L++   K   V+ A++LL+++  KG    +LV+YN LLTGLC  G   +
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A R  RD+  +   P+V ++  L+ +   +G  +EA EL  +M      P  VTYN LI 
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN 284

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L  HG+  HA K  D M      P+  +YN +I   C   +V+  +K   +M+      
Sbjct: 285 GLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE---- 340

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
                         G V + F                 Y  +I   C+ GK   A  +  
Sbjct: 341 --------------GLVGDTFT----------------YNTLIHGYCQVGKLRVAKDIFS 370

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G TPD  T+  L+ GLC+ G I  A+  F  M   +    +  +N ++ GLCK+ 
Sbjct: 371 WMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKAD 430

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           + + + E+F  +  +G  P+  TYTI++ G+        + E+ + ++   ++ ++
Sbjct: 431 KVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQA 486



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 216/468 (46%), Gaps = 5/468 (1%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K +DAF     M+     P +V  T +L  + K NK    I +   M + GI  D  S+T
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++C C+      A+ L+ KM   G+  + VT  SL+ G C      +++  +D + + 
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            GL PN   Y+ ++    K R ++ A+++   +  KG   + V+YN L++GLC  GR  +A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             R  RD+  +  +PNV+ +  L+ +   EG   EA  L  EM      P I+TYN LI  
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                G+   A  + D MV     P   +YN +I   C   +V+  +K   +M H+    +
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 378  EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              TYN L    C  GK+  A  +   + +         Y  ++  LC  GK  +A  ++ 
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 437  EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            ++ K     D  TY+ +I+G+C    ++EA  +F  +     K D   +  ++ GLC++ 
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 497  RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
                + ++   M E G MP+E  Y    +         LSAE++K + 
Sbjct: 1015 LRREADKLCTRMKEDGFMPSERIY----DETLRDHYTSLSAELIKAVH 1058



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 208/435 (47%), Gaps = 5/435 (1%)

Query: 77   HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +K +       +M + G   D+   T L++  C+ ++   A+ ++  M+  G  P   + 
Sbjct: 629  NKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTL 688

Query: 137  TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              L+N  C+      A+ LV+ M + G   N V YN+++ GLC   +LN +L+    + +
Sbjct: 689  GSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK 748

Query: 197  KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            KG+V +A TY+ L+           A +LL D++ +   PN++ +  L+    KEG   E
Sbjct: 749  KGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 808

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            A   ++++  +   PN+++YN L+   C++GR  +A  +   M      P +VTYN LI 
Sbjct: 809  AKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLIT 868

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                  + +  +K+  EM        A +YN +I   C  GK+++  K  ++M      P
Sbjct: 869  GFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPP 928

Query: 377  NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            +  TYN L   LC  GK+++A  +++ L   Q       Y  +I  +CR  K  +A+ L 
Sbjct: 929  DIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLF 988

Query: 436  YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
              +T+ G   D+  Y ++I GLC  GL  EA ++   M+E  + P    ++  L    + 
Sbjct: 989  RSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL----RD 1044

Query: 496  RRTDLSLEVFQMMIE 510
              T LS E+ + + E
Sbjct: 1045 HYTSLSAELIKAVHE 1059



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 187/402 (46%), Gaps = 35/402 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+ A   L +M+  G+ P +V   +LL+  C  N++  A  ++  MV SG  P+  
Sbjct: 112 RCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVV 171

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y  L++CLCK G+V  A++L+ +ME  G    + VTYN+L+ GLC  G   Q+ + L  
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRD 231

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + ++ + P+ FT++ L++A  K+  +  A +L   ++     PN V+YN L+ GLC  GR
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              A + F  + SKG  PNVV+YN L+   C   R E+  +L   M          TYN 
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      GK   A  +   MV     P                  D++  C+  + H  
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTP------------------DIITHCI--LLHG- 390

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
                        LC  G++  A      + + +       Y  +I  LC+  K  +A++
Sbjct: 391 -------------LCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWE 437

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           L   +   G  PD+ TY+ +I GLC  G   EA E+F  M+E
Sbjct: 438 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/527 (22%), Positives = 233/527 (44%), Gaps = 62/527 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  A ++   M S      +V    +++ LCKA+K+++A ++   +   G+ PDA +YT
Sbjct: 396 EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYT 455

Query: 138 YLVNCLCKKGNVGYAMQLVEKMED------------------------------------ 161
            ++  LCK G    A +L  +M++                                    
Sbjct: 456 IMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSI 515

Query: 162 ------YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR---LIQKGLVPNAFTYS----- 207
                 Y Y ++T  ++SLV GL  + + +    F+ R   L+++G  P + ++S     
Sbjct: 516 MESGDLYYYYSDTTLWSSLV-GLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHH 574

Query: 208 --FLLEAAYKER---GVHA-----AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
                   Y+ER    +H      A  L  +++     P++V +  +LT + K  + +  
Sbjct: 575 HHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIV 634

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I  F  + + G   ++ S+ IL+   C   R+  A  LL +M      P+IVT   L+  
Sbjct: 635 IYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNG 694

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                +   A+ ++D M +    P+   YN +I  LC    ++  ++    M  +    +
Sbjct: 695 FCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVAD 754

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L + LC  G+  +A  +++ +  ++      F+  +I +  ++G   +A  L  
Sbjct: 755 AVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYK 814

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM +    P+  TY+SLI G C++G + +A  +F +M      PDV  +N L+ G CKS+
Sbjct: 815 EMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSK 874

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           R +  +++F  M  +G + +  TY  L+ G     +L ++ +V   +
Sbjct: 875 RVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 921



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 142/289 (49%), Gaps = 2/289 (0%)

Query: 69   NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG 128
            N   ++RD  LN+A      M  KG   D V    L+  LC + +   A +++  MV   
Sbjct: 728  NGLCKNRD--LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK 785

Query: 129  IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
            I P+   +T L++   K+GN+  A  L ++M       N +TYNSL+ G C+ G L  + 
Sbjct: 786  IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAK 845

Query: 189  QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
               D ++ KG  P+  TY+ L+    K + V   MKL  ++  +G   +  +YN L+ G 
Sbjct: 846  HMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGY 905

Query: 249  CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            C+ G+   A + F  +   G  P++V+YNILL  LC  G+ E+A  ++ ++        I
Sbjct: 906  CQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDI 965

Query: 309  VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
            +TYNI+I  +  + K   A  +   + +   +  A +Y  +I+ LC  G
Sbjct: 966  ITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 179/448 (39%), Gaps = 69/448 (15%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K   A  +   M+ S  IP    +T ++  + K       + L  KME+ G   +  ++ 
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            L+   C     + +L  L ++++ G                                  
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGF--------------------------------- 681

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
             +P++V+   LL G C+  R +EA+     +   G EPNVV YN ++  LC       A
Sbjct: 682 --QPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNA 739

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            E+   M+        VTYN LI  L   G+   A ++L +MVK +  P+   +  +I  
Sbjct: 740 LEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 799

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
              EG +        +M  R   PN  TYN L                            
Sbjct: 800 FVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL---------------------------- 831

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                 I   C +G+   A  +   M   G  PD  TY++LI G C    +E+ +++F  
Sbjct: 832 ------INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 885

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M       D   +N L+ G C++ + +++ +VF  M++ G  P+  TY IL++ + +  +
Sbjct: 886 MTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGK 945

Query: 533 LELSAEVLKELQLRQVVSESAVERLVMQ 560
           +E +  ++++LQ  Q+  +     +++Q
Sbjct: 946 IEKALVMVEDLQKNQMDVDIITYNIIIQ 973



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 122/242 (50%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            DT  ++  L +A    + M+ +   P+++   +L+   C   ++  A  + ++MVS G  
Sbjct: 798  DTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCF 857

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            PD  +Y  L+   CK   V   M+L  +M   G   +  TYN+L+ G C  G LN + + 
Sbjct: 858  PDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 917

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             +R++  G+ P+  TY+ LL+       +  A+ +++D+       ++++YN+++ G+C+
Sbjct: 918  FNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCR 977

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              + +EA   FR L  KG + + ++Y  ++  LC  G   EA++L   M      P+   
Sbjct: 978  NDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERI 1037

Query: 311  YN 312
            Y+
Sbjct: 1038 YD 1039


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 215/449 (47%), Gaps = 30/449 (6%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           D+     L+   C  +K+  A+     +   G  P   ++  L++ LC +  V  A+ L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
            +M       N VT+ +L+ GLC  G + +++  LDR+++ GL PN  TY  +++   K 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 217 RGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
               +A+ LL  +      KP++V Y+ ++ GL K+GR  +A   F ++  KG  P++V+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ ++   C  G+W EA  LL EM     SP +VT++ LI +L   G  + A  +L EM+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
                P+  + N ++  LC  GK+   ++    M                        Q+
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM------------------------QK 285

Query: 396 AFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +   I +        P  + Y  +I+ L  +GK  +A +L  EM   G  PD+ TYSS+I
Sbjct: 286 SMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC +  ++EA ++F  M    + P++  FN L+ G CK+   D  LE+F  M  +G +
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
            N  TY  L+ G      +  S ++ +E+
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEM 434



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 200/426 (46%), Gaps = 31/426 (7%)

Query: 130 IP-DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           IP D  S+  L+ C C    + +A+    K+   G+    VT+N+L+ GLC+   ++++L
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
               ++ +    PN  T++ L+    +E  V  A+ LLD ++  G +PN ++Y  ++ G+
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 249 CKEGRTEEAIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           CK G T  A+   R +      +P+VV Y+ ++  L  +GR  +A  L  EM      P 
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           IVTY+ +I      GK   A ++L EM+  +  P   +++ +I  L  EG ++     L 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 368 QMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M      PN  T N L   LC  GK+++A                E +K +  S+    
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDAL---------------EMFKAMQKSMMDID 291

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
            T+ AF         G  PD  TY+ LI GL  EG   EA E++  M      PD   ++
Sbjct: 292 ATH-AFN--------GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +++ GLCK  R D + ++F  M  K   PN  T+  L+ G      ++   E+  E+  R
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402

Query: 547 QVVSES 552
            +V+ +
Sbjct: 403 GIVANA 408



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 187/379 (49%), Gaps = 17/379 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RMV  G +P+ +    ++  +CK      A+ ++  M   S I PD 
Sbjct: 93  REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDV 152

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ L K G    A  L  +M+D G   + VTY+ ++ G C  G  +++ + L  
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ + + P+  T+S L+ A  KE  +++A  LL ++I+ G  PN+V+ N LL GLC  G+
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 254 TEEAIRFFRDLPSK-----------GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            ++A+  F+ +              G EP+V +YNIL+  L  EG++ EA EL  EM   
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P  VTY+ +I  L    + D A ++ D M    F P+  ++N +I   C  G VD  
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
           ++   +M  R    N  TY  + ++ G   VG +  +  I Q + +          + ++
Sbjct: 393 LELFCEMGRRGIVANAITY--ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNML 450

Query: 420 TSLCRKGKTYQAFQLLYEM 438
           T L  K +  +A  +L E+
Sbjct: 451 TGLWSKEELKRALAMLEEL 469



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 157/311 (50%), Gaps = 18/311 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D RH D +  + F++++    KG  PD+V  + ++   C + K  +A ++++ M+   I 
Sbjct: 165 DGRHTDAQ--NLFIEMQ---DKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++ L+N L K+G++  A  L+++M   G   N VT N+L+ GLC  G L  +L+ 
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279

Query: 191 LDRLIQK------------GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
             + +QK            G+ P+  TY+ L+     E     A +L +++  +G  P+ 
Sbjct: 280 F-KAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+Y+ ++ GLCK+ R +EA + F  + SK F PN+V++N L+   C  G  ++  EL  E
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCE 398

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M         +TY  LI      G  + +L +  EM+     P   +   ++  L S+ +
Sbjct: 399 MGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEE 458

Query: 359 VDLVVKCLDQM 369
           +   +  L+++
Sbjct: 459 LKRALAMLEEL 469


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 232/514 (45%), Gaps = 39/514 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA   L  MV    + ++     ++   CK  +M +A  ++  M   G+ PD  SY 
Sbjct: 364 RMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYN 423

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV+  CKKG +  A +    M   G+   T+TYN+L++G C LG+++ +L+    +++K
Sbjct: 424 SLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  + S LL+  +K      A+ L  + +A+G   N  ++N ++ GLCK  R  EA
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +      P++++Y  L    C  G  + A+ +L E++    +PTI  +N LI  
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITG 603

Query: 318 ---LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                 HGK +    +L EM      P+  +Y  +IA  C EG +        +M  +  
Sbjct: 604 HFIAKQHGKVN---DILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGL 660

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSL--------------------------GNKQ 407
            PN    + L +     GK  EA  ++Q+L                              
Sbjct: 661 VPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGN 720

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
           + S +  +  VI  LC+ G+   A  LL ++   GF  D++TYSSLI G    G ++ A 
Sbjct: 721 HHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAF 780

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++   M      P++  +N+L+ GLCKS     ++ +F+ +  KG  PN  TY  L+   
Sbjct: 781 DLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLI--- 837

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
              D+      + +  +L+Q + E  +   V  Y
Sbjct: 838 ---DKHCKDGYITEAFKLKQRMIEEGIHPTVFTY 868



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 220/472 (46%), Gaps = 10/472 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L+ A    + M + G +  +    ++L  L +   +   + V E M  +G +PD  +  
Sbjct: 188 QLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVA 247

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +    CK   V +A++ VE+M   G   N V Y++++ G C +G  N + + LD L  +
Sbjct: 248 IMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGR 307

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS---YNVLLTGLCKEGRT 254
           G  PN  TY+ L++    E+ +  A  ++ +I  +  K  +V    +  ++ G C+ GR 
Sbjct: 308 GFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEI--RKNKQLVVDEAVFGAVINGYCQMGRM 365

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A R   ++     + N+  YNI++   C  GR  EA+ +L EM G    P   +YN L
Sbjct: 366 EDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSL 425

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G  + A +  + M++  F  +  +YN ++   CS G +D  ++    M  +  
Sbjct: 426 VDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGI 485

Query: 375 KPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            PNE + + L  L G    GK ++A  + +    +  +     +  VI  LC+  +  +A
Sbjct: 486 APNEISCSTL--LDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L+ +M ++   PD  TY +L  G C  G ++ A  I   +E   + P ++ FN+L+ G
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITG 603

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              +++     ++   M  +G  PN   Y  L+ G   + +L  +  +  E+
Sbjct: 604 HFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEM 655



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 230/486 (47%), Gaps = 17/486 (3%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA      M+ KG  P+ +  + LL    K+ K +KA+ + +  ++ G+  + +++  
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNT 529

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LCK   +  A +LV+KM+ +  P + +TY +L  G C +G+++++ + L+ L   G
Sbjct: 530 VINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLG 589

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P    ++ L+   +  +       +L ++  +G  PN V+Y  L+ G CKEG    A 
Sbjct: 590 FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAY 649

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             + ++  KG  PN+   + L+     +G+++EAN +L  + G D  P I    + IG +
Sbjct: 650 NLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKV 709

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
           A           +D +  G    +   +N +I  LC  G+++     L  +  +    + 
Sbjct: 710 A---------NFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADN 760

Query: 379 GTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ L   C   G V  AF +  ++ +   +     Y  +I  LC+ G+  +A  L  +
Sbjct: 761 FTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKK 820

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +   G +P++ TY++LI   C +G I EA ++   M E    P V  ++ L+ GLC    
Sbjct: 821 LWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGY 880

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL-------SAEVLKELQLRQVVS 550
            + ++++   MIE    PN  TY  L++G    + +++       S  V+K    R V  
Sbjct: 881 MEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQSTIVVKASPRRAVRR 940

Query: 551 ESAVER 556
             +V R
Sbjct: 941 PGSVSR 946



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 201/414 (48%), Gaps = 2/414 (0%)

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           A+S+  L+  L   G +  A+Q+ ++M   G   +  + NS++  L   G+L  ++   +
Sbjct: 173 AASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFE 232

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++ + G +P+ FT + + +A  K +GV  A++ ++++   G + NLV+Y+ ++ G C+ G
Sbjct: 233 QMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVG 292

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI-VTY 311
           +T +A R    LP +GF PN+V+Y +L++  C E   EEA  ++ E+    +       +
Sbjct: 293 QTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVF 352

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             +I      G+ + A ++L+EMV  R + +   YN +I   C  G++      L +M  
Sbjct: 353 GAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTG 412

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              +P+  +YN L    C  G + +AF    ++     ++    Y  ++   C  G    
Sbjct: 413 VGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDD 472

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L + M K G  P+  + S+L+ G    G  E+AL ++          +   FN ++ 
Sbjct: 473 ALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVIN 532

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           GLCK  R   + E+   M +    P+  TY  L  G     +++ ++ +L EL+
Sbjct: 533 GLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE 586



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 146/317 (46%), Gaps = 29/317 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ND   +   M ++G  P+ V    L+   CK   +  A  +   M+  G++P+    +
Sbjct: 612 KVNDILFE---MSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICS 668

Query: 138 YLVNCLCKKGN--------------------------VGYAMQLVEKMEDYGYPTNTVTY 171
            LV+C  +KG                           +G     ++ +    + +  + +
Sbjct: 669 SLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMW 728

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N ++ GLC LG +  +   L  L  KG V + FTYS L+        V  A  L D +++
Sbjct: 729 NIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLS 788

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G  PN+V+YN L+ GLCK G    A+  F+ L +KG  PN ++YN L+   C +G   E
Sbjct: 789 VGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A +L   M      PT+ TY+ILI  L   G  + A+K+LD+M++    P+  +Y  +I 
Sbjct: 849 AFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908

Query: 352 RLCSEGKVDLVVKCLDQ 368
                  VD+ +  LDQ
Sbjct: 909 GYVRCESVDVPIMPLDQ 925



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 179/407 (43%), Gaps = 37/407 (9%)

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            LVE  +++ +  +  +++ L+R L   G L+ +LQ  D +   G   +  + + +L   
Sbjct: 161 HLVEVYKEFSF--SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRL 218

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            +   + A + + + +   G  P+  +  ++    CK      A+ F  ++   G E N+
Sbjct: 219 AQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNL 278

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V+Y+ ++   C  G+  +A  +L  + G   SP IVTY +L+         + A  V+ E
Sbjct: 279 VAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQE 338

Query: 334 MVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
           + K +      A +  +I   C  G+++   + L++M   R + N   YN          
Sbjct: 339 IRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYN---------- 388

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
                                    +I   C+ G+  +A  +L+EMT  G  PD+Y+Y+S
Sbjct: 389 ------------------------IMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNS 424

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ G C +GL+ +A E +  M    +      +NALL G C     D +L ++ +M++KG
Sbjct: 425 LVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKG 484

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
             PNE + + L++G     + E +  + KE   R +   +     V+
Sbjct: 485 IAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531



 Score = 42.7 bits (99), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 39/70 (55%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  + +AF   +RM+ +G  P V   + L+  LC    M++AIK+++ M+ + + 
Sbjct: 838 DKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVD 897

Query: 131 PDASSYTYLV 140
           P+  +Y  L+
Sbjct: 898 PNYVTYWTLI 907


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 206/430 (47%), Gaps = 2/430 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A KV + M+   ++PD++SY  +V   C+ G +    + ++ M + GY  +  T   ++ 
Sbjct: 212 AEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIS 271

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
                G +N++  +  + +Q GL PN   +S L+    K   +  A ++L++++ KG KP
Sbjct: 272 TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKP 331

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           N+ ++  L+ GLCK+G TE+A R F  L  S  ++PNV +Y  ++   C E +   A  L
Sbjct: 332 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEML 391

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L  M      P   TY  LI      G    A +++D M K  F P+  +YN II  LC 
Sbjct: 392 LIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCK 451

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
           +G+     K L +        ++ TY  L +  C     ++A AI   +           
Sbjct: 452 KGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHT 511

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I + CR+ K  ++ +L  E    G  P   TY+S+I G C +G I  A++ F  M 
Sbjct: 512 YNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMR 571

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +Y  KPD   + AL+ GLC   + D + ++++ MI+ G  P E T   L      Q +  
Sbjct: 572 DYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSA 631

Query: 535 LSAEVLKELQ 544
            +  +L+ L+
Sbjct: 632 TAMIILERLE 641



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 186/397 (46%), Gaps = 2/397 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M+ +   PD      ++   C+  ++    + ++ M+  G   D ++ T +++   +
Sbjct: 216 FDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSE 275

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG V  A    +K    G   N + ++SL+ GLC +G++ Q+ + L+ +++KG  PN +T
Sbjct: 276 KGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYT 335

Query: 206 YSFLLEAAYKERGVHAAMKLLDDII-AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           ++ L++   K+     A +L   ++ +   KPN+ +Y  ++ G CKE +   A      +
Sbjct: 336 HTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRM 395

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +G  PN  +Y  L+   C  G +  A EL+  M     +P I TYN +I  L   G+ 
Sbjct: 396 KEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRF 455

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A K+L   +K        +Y  +I+  C +      +    +MF    +P+  TYN L
Sbjct: 456 PEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVL 515

Query: 385 -AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
            A  C   KV+E+  + +          +E Y  +I   CR G    A +  ++M  YG 
Sbjct: 516 IATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGC 575

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            PDS TY +LI GLC E  ++EA +++  M +    P
Sbjct: 576 KPDSITYGALISGLCNESKLDEACQLYETMIDNGLSP 612



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 220/454 (48%), Gaps = 5/454 (1%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K+K+A+ ++  M + G++  A    ++++     G V YA ++ ++M D     ++ +Y 
Sbjct: 173 KLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYK 232

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG-VHAAMKLLDDIIA 231
            +V G C +G ++   ++L  +I++G   +  T + ++ + + E+G V+ A       + 
Sbjct: 233 LMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMI-STFSEKGFVNRAFWYFKKWVQ 291

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G  PNL++++ L+ GLCK G  ++A     ++  KG++PNV ++  L+  LC +G  E+
Sbjct: 292 MGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEK 351

Query: 292 ANELLAEMDGGDR-SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           A  L  ++   D   P + TY  +I       K + A  +L  M +    P+  +Y  +I
Sbjct: 352 AFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLI 411

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
              C  G      + +D M      PN  TYN +   LC  G+  EA+ +++        
Sbjct: 412 DGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLH 471

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           + +  Y  +I+  CR+    QA  +   M K G  PD +TY+ LI   C +  +EE+ ++
Sbjct: 472 ADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKL 531

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F         P  + + +++ G C+      +++ F  M + G  P+  TY  L+ G+ +
Sbjct: 532 FEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCN 591

Query: 530 QDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
           + +L+ + + L E  +   +S   V R+ + Y++
Sbjct: 592 ESKLDEACQ-LYETMIDNGLSPCEVTRVTLAYEY 624



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 167/330 (50%), Gaps = 2/330 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGIIPDASSYT 137
           +  AF  LE MV KG KP+V   T L+  LCK    +KA ++ ++++ S    P+  +YT
Sbjct: 314 IKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYT 373

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N  CK+  +  A  L+ +M++ G   NT TY  L+ G C  GN  ++ + +D + ++
Sbjct: 374 CMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKE 433

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN FTY+ +++   K+     A KLL   +  G   + V+Y +L++  C++   ++A
Sbjct: 434 GFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQA 493

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +   G +P++ +YN+L+ + C + + EE+ +L  E  G    PT  TY  +I  
Sbjct: 494 LAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICG 553

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A+K   +M     +P + +Y  +I+ LC+E K+D   +  + M      P 
Sbjct: 554 YCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPC 613

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
           E T   LA   C  G    A  I++ L  K
Sbjct: 614 EVTRVTLAYEYCKQGDSATAMIILERLEKK 643



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 215/450 (47%), Gaps = 23/450 (5%)

Query: 98  VVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           +V AT  L +    + + +A +VM+ MV S                 + G +  A+ +V 
Sbjct: 142 IVCATTFLNN----DNLDRATEVMQCMVRS---------------FSEIGKLKEAVNMVI 182

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           +M+++G        N ++     LG ++ + +  D ++ + +VP++ +Y  ++    +  
Sbjct: 183 EMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMG 242

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            +    + L D+I +G   +  +  ++++   ++G    A  +F+     G  PN+++++
Sbjct: 243 RISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFS 302

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            L+  LC  G  ++A E+L EM      P + T+  LI  L   G T+ A ++  ++V+ 
Sbjct: 303 SLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 362

Query: 338 -RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQE 395
             ++P+  +Y  +I   C E K++     L +M  +   PN  TY  L    C  G    
Sbjct: 363 DNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGR 422

Query: 396 AFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           A+ ++  +G K+  +P  F Y  +I  LC+KG+  +A++LL    K G   D  TY+ LI
Sbjct: 423 AYELMDLMG-KEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILI 481

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
              C +   ++AL IF  M +   +PD+  +N L+   C+ ++ + S ++F+  +  G +
Sbjct: 482 SEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLL 541

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
           P + TYT ++ G      +  + +   +++
Sbjct: 542 PTKETYTSMICGYCRDGHISSAIKFFHKMR 571



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 142/285 (49%), Gaps = 3/285 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KLN A + L RM  +G  P+    T L+   CKA    +A ++M++M   G  P+  
Sbjct: 381 KEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIF 440

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ LCKKG    A +L+ +    G   + VTY  L+   C   +  Q+L    R+
Sbjct: 441 TYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRM 500

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL P+  TY+ L+    +++ V  + KL ++ +  G  P   +Y  ++ G C++G  
Sbjct: 501 FKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHI 560

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             AI+FF  +   G +P+ ++Y  L+  LC E + +EA +L   M     SP  VT   L
Sbjct: 561 SSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTL 620

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                  G +  A+ +L+ + K  +     + N +I +LCSE KV
Sbjct: 621 AYEYCKQGDSATAMIILERLEKKLW---IRTVNTLIRKLCSEKKV 662


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 217/449 (48%), Gaps = 30/449 (6%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           D+     L+   C  +K+  A+     +   G  P   ++  L++ LC +  V  A+ L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
            +M       N VT+ +L+ GLC  G + +++  LDR+++ GL PN  TY  +++   K 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 217 RGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
               +A+ LL  +      KP++V Y+ ++ GL K+GR  +A   F ++  KG  P++V+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ ++   C  G+W EA  LL EM     SP +VT++ LI +L   G  + A  +L EM+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
                P+  + N ++  LC  GK+   +    +MF                      +Q+
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDAL----EMFK--------------------AMQK 285

Query: 396 AFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +   I +        P  + Y  +I+ L  +GK  +A +L  EM   G  PD+ TYSS+I
Sbjct: 286 SMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC +  ++EA ++F  M    + P++  FN L+ G CK+   D  LE+F  M  +G +
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
            N  TY  L+ G      +  S ++ +E+
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEM 434



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 200/426 (46%), Gaps = 31/426 (7%)

Query: 130 IP-DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           IP D  S+  L+ C C    + +A+    K+   G+    VT+N+L+ GLC+   ++++L
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
               ++ +    PN  T++ L+    +E  V  A+ LLD ++  G +PN ++Y  ++ G+
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 249 CKEGRTEEAIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           CK G T  A+   R +      +P+VV Y+ ++  L  +GR  +A  L  EM      P 
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           IVTY+ +I      GK   A ++L EM+  +  P   +++ +I  L  EG ++     L 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 368 QMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M      PN  T N L   LC  GK+++A                E +K +  S+    
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDAL---------------EMFKAMQKSMMDID 291

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
            T+ AF         G  PD  TY+ LI GL  EG   EA E++  M      PD   ++
Sbjct: 292 ATH-AFN--------GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +++ GLCK  R D + ++F  M  K   PN  T+  L+ G      ++   E+  E+  R
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402

Query: 547 QVVSES 552
            +V+ +
Sbjct: 403 GIVANA 408



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 190/411 (46%), Gaps = 52/411 (12%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDA 133
           R+ ++ +A   L+RMV  G +P+ +    ++  +CK      A+ ++  M   S I PD 
Sbjct: 93  REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDV 152

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             Y+ +++ L K G    A  L  +M+D G   + VTY+ ++ G C  G  +++ + L  
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ + + P+  T+S L+ A  KE  +++A  LL ++I+ G  PN+V+ N LL GLC  G+
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 254 TEEAIRFFRDLPSK-----------GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            ++A+  F+ +              G EP+V +YNIL+  L  EG++ EA EL  EM   
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P  VTY+ +I  L    + D A ++ D M    F P+  ++N +I   C  G VD  
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD-- 390

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                              +GL + C +G+   V  A                  Y  +I
Sbjct: 391 -------------------DGLELFCEMGRRGIVANAIT----------------YITLI 415

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               + G    +  +  EM   G  PD+ T  +++ GL  +  +++AL + 
Sbjct: 416 RGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAML 466



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 157/311 (50%), Gaps = 18/311 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D RH D +  + F++++    KG  PD+V  + ++   C + K  +A ++++ M+   I 
Sbjct: 165 DGRHTDAQ--NLFIEMQ---DKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +++ L+N L K+G++  A  L+++M   G   N VT N+L+ GLC  G L  +L+ 
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279

Query: 191 LDRLIQK------------GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
             + +QK            G+ P+  TY+ L+     E     A +L +++  +G  P+ 
Sbjct: 280 F-KAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 338

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+Y+ ++ GLCK+ R +EA + F  + SK F PN+V++N L+   C  G  ++  EL  E
Sbjct: 339 VTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCE 398

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M         +TY  LI      G  + +L +  EM+     P   +   ++  L S+ +
Sbjct: 399 MGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEE 458

Query: 359 VDLVVKCLDQM 369
           +   +  L+++
Sbjct: 459 LKKALAMLEEL 469



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 158/331 (47%), Gaps = 13/331 (3%)

Query: 86  LERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           L +M    H KPDVV  + ++  L K  +   A  +   M   GI PD  +Y+ ++N  C
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
             G    A +L+++M       + VT++ L+  L   G+LN +   L  +I  G+ PN  
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258

Query: 205 TYSFLLEAAYKERGVHAAMKLLD-------DIIA----KGGKPNLVSYNVLLTGLCKEGR 253
           T + LL+       +  A+++         DI A     G +P++ +YN+L++GL  EG+
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA   + ++P +G  P+ V+Y+ ++  LC + R +EA ++   M     SP IVT+N 
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G  D  L++  EM +     +A +Y  +I      G ++  +    +M    
Sbjct: 379 LITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG 438

Query: 374 CKPNEGTY-NGLAMLCGVGKVQEAFAIIQSL 403
             P+  T  N L  L    ++++A A+++ L
Sbjct: 439 VYPDTITIRNMLTGLWSKEELKKALAMLEEL 469


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 231/491 (47%), Gaps = 14/491 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDA 133
           R  +L+  F  L  +V KG + + +  T LL  LC   +   A+  V+  M     +PD 
Sbjct: 99  RADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDV 158

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMED---YGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            S T L+  LC +     A++L   M D    G   + V+Y +++ G    G+  ++   
Sbjct: 159 FSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYST 218

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ + + P+  TYS ++ A  K + +  AM++L  ++  G  PN  +Y  ++ G C 
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCS 278

Query: 251 EGRTEEAIRFFRDLPS-----KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G+ +EAI F + + S      G EP++ +Y  LL+    +G     + LL  M      
Sbjct: 279 SGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIH 338

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P    YNILI + A  GK D A+ V  +M +    P A +Y  +I  LC  G+V+  +  
Sbjct: 339 PDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLY 398

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
            +QM      P    YN L   LC   K + A  +I  + ++       F+  +I S C+
Sbjct: 399 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 458

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +G+  ++ +L   M + G  PD  TYS+LI G C+ G ++EA+++   M     KP+   
Sbjct: 459 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 518

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +  L+ G CK  R   +L +F+ M   G  P+  TY I+++G+        +    KEL 
Sbjct: 519 YRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA----KELY 574

Query: 545 LRQVVSESAVE 555
           +R   S + +E
Sbjct: 575 VRITESGTQIE 585



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 225/459 (49%), Gaps = 6/459 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+     M+ +   PDVV  ++++  LCK   M KA++V+  MV +G++P+  +YT +++
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMH 274

Query: 142 CLCKKGNVGYAMQLVEKM-----EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             C  G    A+  ++K+     E  G   +  TY +L++G    G L      LD +++
Sbjct: 275 GYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVR 334

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+ P+ + Y+ L+ A  K+  V  AM +   +  +G  P+ V+Y  ++  LCK GR E+
Sbjct: 335 NGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVED 394

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+ +F  +  +G  P  + YN L+  LC   +WE A EL+ EM         + +N +I 
Sbjct: 395 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 454

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           S    G+   + K+ D MV+   +P   +Y+ +I   C  GK+D  +K L  M     KP
Sbjct: 455 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKP 514

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TY  L    C + ++ +A  + + + +   S     Y  ++  L +  +T  A +L 
Sbjct: 515 NTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 574

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             +T+ G   +  TY+ ++ GLC   L ++AL +F  +   D K +   FN ++  L K 
Sbjct: 575 VRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKV 634

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            R   + ++F      G +PN  TY ++ E I  Q  LE
Sbjct: 635 GRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 673



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 195/440 (44%), Gaps = 34/440 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ MV  G  PD      L+    K  K+ +A+ V   M   G+ PDA +Y  ++  LCK
Sbjct: 329 LDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCK 388

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  AM   E+M D G     + YNSL+ GLC      ++ + +  ++ +G+  N   
Sbjct: 389 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 448

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ ++++  KE  V  + KL D ++  G KP++++Y+ L+ G C  G+ +EA++    + 
Sbjct: 449 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMV 508

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S G +PN V+Y  L+   C   R  +A  L  EM+    SP I+TYNI++  L    +T 
Sbjct: 509 SVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 568

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++   + +   +   ++YN I+  LC     D                         
Sbjct: 569 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTD------------------------- 603

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
                    +A  + Q+L           +  +I +L + G+  +A  L    +  G  P
Sbjct: 604 ---------DALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVP 654

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           + +TY  +   +  +GL+EE  ++F+ ME+     D    N ++  L +      +    
Sbjct: 655 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 714

Query: 506 QMMIEKGQMPNETTYTILVE 525
            M+ EK      +T ++ ++
Sbjct: 715 SMIDEKHFSLEASTASLFID 734



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 227/532 (42%), Gaps = 49/532 (9%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG---IIPDASSYT 137
           DA    + ++ +G    +      L D+ + +    A+     M  +G   + P   +Y 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYA 91

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-LDRLIQ 196
            L+ C C+   +      +  +   G+    +T+  L++GLC     + ++   L R+ +
Sbjct: 92  ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKL---LDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
              +P+ F+ + LL+    E     A++L   + D    G  P++VSY  ++ G  KEG 
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-------------- 299
           + +A   + ++  +   P+VV+Y+ ++ +LC     ++A E+L  M              
Sbjct: 212 SGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTS 271

Query: 300 -----------------------DGGDRS---PTIVTYNILIGSLAYHGKTDHALKVLDE 333
                                  DG +     P I TY  L+   A  G       +LD 
Sbjct: 272 IMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDL 331

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGK 392
           MV+    P    YN +I     +GKVD  +    +M  +   P+  TY   + +LC  G+
Sbjct: 332 MVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGR 391

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           V++A    + + ++  S     Y  +I  LC   K  +A +L+ EM   G   ++  ++S
Sbjct: 392 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 451

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +I   C EG + E+ ++F +M     KPD+  ++ L+ G C + + D ++++   M+  G
Sbjct: 452 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG 511

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
             PN  TY  L+ G      +  +  + KE++   V  +     +++Q  F+
Sbjct: 512 LKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQ 563



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 183/378 (48%), Gaps = 1/378 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A L   +M  +G  PD V    ++  LCK+ +++ A+   E M+  G+ P    Y 
Sbjct: 356 KVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 415

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC       A +L+ +M D G   NT+ +NS++   C  G + +S +  D +++ 
Sbjct: 416 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 475

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+  TYS L++       +  AMKLL  +++ G KPN V+Y  L+ G CK  R  +A
Sbjct: 476 GVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDA 535

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F+++ S G  P++++YNI+L+ L    R   A EL   +        + TYNI++  
Sbjct: 536 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 595

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +  TD AL++   +     +  A ++N +I  L   G+                 PN
Sbjct: 596 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPN 655

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  +A  + G G ++E   +  S+ +   +       +++  L ++G+  +A   L 
Sbjct: 656 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 715

Query: 437 EMTKYGFTPDSYTYSSLI 454
            + +  F+ ++ T S  I
Sbjct: 716 MIDEKHFSLEASTASLFI 733



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 35/320 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI---------------- 118
           +  ++ DA L  E+M+ +G  P  +   +L++ LC  NK ++A                 
Sbjct: 388 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 447

Query: 119 -------------------KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM 159
                              K+ ++MV  G+ PD  +Y+ L++  C  G +  AM+L+  M
Sbjct: 448 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGM 507

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
              G   NTVTY +L+ G C +  +  +L     +   G+ P+  TY+ +L+  ++ R  
Sbjct: 508 VSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 567

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
            AA +L   I   G +  L +YN++L GLCK   T++A+R F++L     +    ++NI+
Sbjct: 568 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIM 627

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           + +L   GR  EA +L          P   TY ++  ++   G  +   ++   M     
Sbjct: 628 IDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 687

Query: 340 RPSAASYNPIIARLCSEGKV 359
              +   N I+  L   G++
Sbjct: 688 TVDSGMLNFIVRELLQRGEI 707



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 129/266 (48%), Gaps = 3/266 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++ ++ ++    + MV  G KPD++  + L+   C A KM +A+K++  MVS G+ 
Sbjct: 454 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLK 513

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L+N  CK   +G A+ L ++ME  G   + +TYN +++GL        + + 
Sbjct: 514 PNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 573

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ + G      TY+ +L    K +    A+++  ++     K    ++N+++  L K
Sbjct: 574 YVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLK 633

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA   F    S G  PN  +Y ++  ++  +G  EE ++L   M+    +     
Sbjct: 634 VGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 693

Query: 311 YNILIGSLAYHGKTDHA---LKVLDE 333
            N ++  L   G+   A   L ++DE
Sbjct: 694 LNFIVRELLQRGEITRAGTYLSMIDE 719



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 137/307 (44%), Gaps = 19/307 (6%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL-----LAEMDGGDRSPTIV 309
           E+A   F +L  +G   ++   N   R+L    R   A  +     +A    G  +PT+ 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLN---RALADVARHSPAAAVSRYNRMARAGAGKVTPTVH 88

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQ 368
           TY ILIG      + D     L  +VK  FR  A ++ P++  LC++ +  D +   L +
Sbjct: 89  TYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI--IQSLGNKQNSSPQEF-YKYVITSLCR 424
           M    C P+  +   L   LC   + QEA  +  + + G    S+P    Y  VI    +
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFK 208

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +G + +A+   +EM     +PD  TYSS+I  LC    +++A+E+   M +    P+   
Sbjct: 209 EGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRT 268

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE-----TTYTILVEGIAHQDELELSAEV 539
           + +++ G C S +   ++   + +   G  P+       TY  L++G A +  L +    
Sbjct: 269 YTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL-VGMHA 327

Query: 540 LKELQLR 546
           L +L +R
Sbjct: 328 LLDLMVR 334


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 230/471 (48%), Gaps = 40/471 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G++P++V  + L+  +C   K+  A+++ + M  SG   D   Y YL+N L K      A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           ++L  +M       N  TY  ++  LC  G   + L+    +I  G+ PN   YS L+  
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             +   +  A+ L D+++++G K N+++YN L+   C+ G  +EA R F  +  +G  P+
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV++  L+  L  +G+ +EA ++   M     +P IVTYN L+  L  H + DHA+++ +
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
            MV+   +    SYN +I   C+ GK +  +    +M +    P+  TY  L        
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTIL-------- 295

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
                                     + +L + G+   A +L   M   G +P   TY+ 
Sbjct: 296 --------------------------LKALYQNGRIRTAKELFNNMQICGQSPSLDTYTV 329

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ GLC  G IEEA+++F  ++   YKP +  ++ L+ G+ ++RR + ++E+F  +   G
Sbjct: 330 LLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVG 389

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            +PN  TY I++ G+  + +L L AE     +L   + ES  E+  + ++F
Sbjct: 390 LVPNIVTYNIMINGLCKEGKL-LEAE-----RLFVQMEESGCEQDEISFNF 434



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 206/417 (49%), Gaps = 34/417 (8%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LCK     K +K+   M++ GI P+   Y+ L+N LC+ G +  A+ L ++M   G   N
Sbjct: 89  LCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKAN 148

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            +TYNSL+   C  G   ++ +   +++ +G++P+  T++ L++   K+  V  A K+ +
Sbjct: 149 VITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFE 208

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            +I +G  PN+V+YN LL GLC   + + A+R F  +  +G + +V+SYN L+   C  G
Sbjct: 209 LMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSG 268

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           + EEA  L  +M   + +P+I TY IL+ +L  +G+   A ++ + M      PS  +Y 
Sbjct: 269 KTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYT 328

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQ 407
            ++  LC  G       C                           ++EA  + +SL + +
Sbjct: 329 VLLDGLCKNG-------C---------------------------IEEAIDVFRSLKSIK 354

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                  Y  +I  + +  +   A ++  E+   G  P+  TY+ +I GLC EG + EA 
Sbjct: 355 YKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAE 414

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            +FV MEE   + D  +FN ++ G  +  +   ++E  + M EK   PN++   +LV
Sbjct: 415 RLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLV 471



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 200/404 (49%), Gaps = 35/404 (8%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M++ G  P+V+  ++L+  LC+  K+++A+ + + MVS GI  +  +Y  L++  C+ G 
Sbjct: 105 MINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGL 164

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A +   +M   G   + VT+ +L+  L   G + ++ +  + +I++G  PN  TY+ 
Sbjct: 165 WKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNS 224

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL        +  A++L + ++ +G K +++SYN L+ G C  G+TEEA+  FR +  + 
Sbjct: 225 LLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P++ +Y ILL++L   GR   A EL   M    +SP++ TY +L+  L  +G  + A+
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            V   +   +++PS   Y+ +I  +    + +  ++  D++      PN  TYN      
Sbjct: 345 DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYN------ 398

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                                        +I  LC++GK  +A +L  +M + G   D  
Sbjct: 399 ----------------------------IMINGLCKEGKLLEAERLFVQMEESGCEQDEI 430

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +++ +IRG   E  +++A+E    M E ++ P+ D+   +L+ L
Sbjct: 431 SFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN-DSVTLMLVNL 473



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 159/298 (53%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A     +MV +G  PDVV  T L+  L K  K+++A K+ E+M+  G  P+  +Y  L+
Sbjct: 167 EATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLL 226

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N LC    + +A++L E M + G   + ++YN+L+ G C  G   +++    ++  + L 
Sbjct: 227 NGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELT 286

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ LL+A Y+   +  A +L +++   G  P+L +Y VLL GLCK G  EEAI  
Sbjct: 287 PSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDV 346

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           FR L S  ++P++  Y+IL+  +    RWE A E+  E+      P IVTYNI+I  L  
Sbjct: 347 FRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCK 406

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
            GK   A ++  +M +        S+N II     E +V   ++ L +M  +   PN+
Sbjct: 407 EGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPND 464



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 118/230 (51%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H+++ A    E MV +G K DV+    L+   C + K ++A+ +   M    + P  ++Y
Sbjct: 233 HQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTY 292

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+  L + G +  A +L   M+  G   +  TY  L+ GLC  G + +++     L  
Sbjct: 293 TILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKS 352

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
               P+   YS L+   ++ R   +AM++ D+I   G  PN+V+YN+++ GLCKEG+  E
Sbjct: 353 IKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLE 412

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           A R F  +   G E + +S+N ++R    E + ++A E L  M   + SP
Sbjct: 413 AERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSP 462


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 210/418 (50%), Gaps = 2/418 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++RMV+KG +PD+V    ++  LCK      A  ++  M    + P    Y  +++ LCK
Sbjct: 4   IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 63

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             ++  A+ L ++ME  G   N VTY+SL+  LC  G  + + + L  +I++ + P+ FT
Sbjct: 64  YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 123

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +S L++A  KE  +  A KL D+++ +   P++V+Y+ L+ G C   R +EA + F  + 
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 183

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           SK   P+VV+YN L++  C   R EE  E+  EM         VTYNILI  L   G  D
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GL 384
            A ++  EMV     P+  +YN ++  LC  GK++  +   + +   + +P   TYN  +
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             +C  GKV++ + +  +L  K        Y  +I+  CRKG   +A  L  EM + G  
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 363

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           P+S  Y++LIR    +G  E + E+   M    +  D      L+  +    R D S 
Sbjct: 364 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKSF 420



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 202/420 (48%), Gaps = 2/420 (0%)

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
           + +++ MV+ G  PD  +Y  +VN LCK+G+   A  L+ KME        + YN+++ G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           LC   +++ +L     +  KG+ PN  TYS L+           A +LL D+I +   P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           + +++ L+    KEG+  EA + + ++  +  +P++V+Y+ L+   CM  R +EA ++  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
            M      P +VTYN LI     + + +  ++V  EM +     +  +YN +I  L   G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
             D+  +   +M      PN  TYN  L  LC  GK+++A  + + L   +       Y 
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I  +C+ GK    + L   ++  G  PD   Y+++I G C +G  EEA  +F  M+E 
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
              P+   +N L+    +    + S E+ + M   G   + +T   LV  + H   L+ S
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 419



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 194/396 (48%), Gaps = 7/396 (1%)

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           M L+++M   G   + VTY  +V GLC  G+ + +   L+++ Q  L P    Y+ +++ 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K + +  A+ L  ++  KG +PN+V+Y+ L++ LC  GR  +A R   D+  +   P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V +++ L+ +   EG+  EA +L  EM      P+IVTY+ LI     H + D A ++ +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLC 388
            MV     P   +YN +I   C   +V+  ++   +M  R    N  TYN    GL    
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                QE F  + S G   N      Y  ++  LC+ GK  +A  +   + +    P  Y
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMT---YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 297

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY+ +I G+C  G +E+  ++F  +     KPDV  +N ++ G C+    + +  +F+ M
Sbjct: 298 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            E G +PN   Y  L+       + E SAE++KE++
Sbjct: 358 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 393



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 157/306 (51%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA    + M +KG +P+VV  ++L+  LC   +   A +++  M+   I PD  +++ 
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++   K+G +  A +L ++M       + VTY+SL+ G CM   L+++ Q  + ++ K 
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY+ L++   K + V   M++  ++  +G   N V+YN+L+ GL + G  + A 
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+++ S G  PN+++YN LL  LC  G+ E+A  +   +      PTI TYNI+I  +
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 306

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK +    +   +     +P   +YN +I+  C +G  +       +M      PN 
Sbjct: 307 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 366

Query: 379 GTYNGL 384
           G YN L
Sbjct: 367 GCYNTL 372



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 1/277 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA   L  M+ +   PDV   + L+    K  K+ +A K+ + MV   I P   +Y+
Sbjct: 101 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 160

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  C    +  A Q+ E M       + VTYN+L++G C    + + ++    + Q+
Sbjct: 161 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 220

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLV N  TY+ L++  ++      A ++  ++++ G  PN+++YN LL GLCK G+ E+A
Sbjct: 221 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 280

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  L     EP + +YNI++  +C  G+ E+  +L   +      P +V YN +I  
Sbjct: 281 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 340

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPII-ARL 353
               G  + A  +  EM +    P++  YN +I ARL
Sbjct: 341 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL +A    + MV +   P +V  ++L+   C  +++ +A ++ E MVS    
Sbjct: 129 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 188

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+   CK   V   M++  +M   G   NTVTYN L++GL   G+ + + + 
Sbjct: 189 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 248

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  G+ PN  TY+ LL+   K   +  AM + + +     +P + +YN+++ G+CK
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 308

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+    F +L  KG +P+VV+YN ++   C +G  EEA+ L  EM      P    
Sbjct: 309 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 368

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           YN LI +    G  + + +++ EM    F   A++   ++  +  +G++D
Sbjct: 369 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 417


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 221/474 (46%), Gaps = 19/474 (4%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M++     + V   N    LC   K +KA ++++ M+  G +PD S+YT ++  LC+ 
Sbjct: 406 EEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQA 465

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  +  L ++M+  G   +  TY  L+   C  G + Q+  + D +   G  PN  TY
Sbjct: 466 KKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTY 525

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + LL A  K + +  A  +   ++     PN V+Y+ L+ GLCK G  ++A   +  L  
Sbjct: 526 TALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIG 585

Query: 267 KG--------FE--------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
                     FE        PNVV+Y  L+  LC   +  +A+ELL  M      P  + 
Sbjct: 586 TSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIV 645

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI      GK D+A +V   M K  + PS  +Y  +I R+  +G++DL +K L +M 
Sbjct: 646 YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML 705

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +  C PN  TY  +   L  VG++++A  ++  +  K  S     Y  +I  L + GK  
Sbjct: 706 NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKAD 765

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            + +L  +M   G  P+  TY  LI   C  GL++EA  +   M+   +   +  ++  +
Sbjct: 766 ASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAV 825

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G   S++   SL + + M     +P    Y +L++  +    LE + E+ KEL
Sbjct: 826 QGF--SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKEL 877



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 226/506 (44%), Gaps = 59/506 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   AF  L+ M+ KG  PD    T ++  LC+A K++K+  + + M  +G+ PD  +YT
Sbjct: 432 KFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYT 491

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYG---------------------------------- 163
            L++  CK G +  A    ++M   G                                  
Sbjct: 492 ILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA 551

Query: 164 --YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG----------------LVPNAFT 205
             YP N VTY++L+ GLC  G + ++ +  ++LI                   + PN  T
Sbjct: 552 ACYP-NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVT 610

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L++   K + V  A +LLD ++A G +PN + Y+ L+ G CK G+ + A   F  + 
Sbjct: 611 YGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMT 670

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G+ P+V +Y  L+  +  +GR + A ++L+EM     +P +VTY  +I  L+  G+ +
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIE 730

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL +L  M +    P+  +Y  +I  L   GK D  +K   QM  + C PN  TY  L 
Sbjct: 731 KALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLI 790

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G + EA  ++  +  K    P+    Y         K   +  LL EM  +   
Sbjct: 791 NHCCAAGLLDEAHLLLDEM--KHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETV 848

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN---FNALLLGLCKSRRTDLS 501
           P +  Y  LI      G +E ALE+   + E     ++ +   + +L+  LC + + + +
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEA 908

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGI 527
             ++  M  KG +P+   +  LV+G+
Sbjct: 909 FTLYTEMTRKGIVPDLIVFVSLVKGL 934



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 230/509 (45%), Gaps = 29/509 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            N+A   L RM      P+VV    LL    K  +     +++ MM++ G  P+ S +  
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS--LQFLDRLIQ 196
           LV+  C  G+  YA +L  +M   G P   V YN  +  +C    L  +  L  ++++ +
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406

Query: 197 KGLVP-------NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           + L         N   +S  L    K      A ++L +++ KG  P+  +Y  ++T LC
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGK---FEKAFQILKEMMRKGFVPDTSTYTKVITFLC 463

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           +  + E++   F+++   G  P+V +Y IL+ S C  G  E+A     EM     SP +V
Sbjct: 464 QAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVV 523

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  L+ +     +   A  +   MV     P+A +Y+ +I  LC  G++    +  +++
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583

Query: 370 F--------------HRRC--KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
                          +  C   PN  TY  L   LC   KV +A  ++ ++        Q
Sbjct: 584 IGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQ 643

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  +I   C+ GK   A ++   MTK G+ P  +TY+SLI  +  +G ++ A+++   
Sbjct: 644 IVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSE 703

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M      P+V  + A++ GL K    + +L +  +M EKG  PN  TYT L++G+    +
Sbjct: 704 MLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGK 763

Query: 533 LELSAEVLKELQLRQVVSESAVERLVMQY 561
            + S ++ K++  +         R+++ +
Sbjct: 764 ADASLKLFKQMNSKGCAPNYVTYRVLINH 792



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/580 (24%), Positives = 234/580 (40%), Gaps = 102/580 (17%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R    ++A  +L R+   G++P  V    L+  L  A +++   +V + M +SG   D S
Sbjct: 181 RHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRS 240

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +  Y    LCK G    A+ ++EK ED+    +TV    ++ GL      N+++ FL R+
Sbjct: 241 TIGYFAQALCKVGRWADALNMLEK-EDFNL--DTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TY  LL    K++      ++++ ++ +G  PN   +N L+ G C  G  
Sbjct: 298 RCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDY 357

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL---------------------------------- 280
             A + F  + + G  P  V+YNI +                                  
Sbjct: 358 AYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNK 417

Query: 281 -------RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
                  R LC  G++E+A ++L EM      P   TY  +I  L    K + +  +  E
Sbjct: 418 VNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQE 477

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM------------------------ 369
           M +    P   +Y  +I   C  G ++      D+M                        
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537

Query: 370 -------FHR----RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF--- 414
                  FHR     C PN  TY+ L   LC  G++Q+A  + + L     +   +F   
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFE 597

Query: 415 -------------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
                        Y  +I  LC+  K   A +LL  M   G  P+   Y +LI G C  G
Sbjct: 598 GNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIG 657

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I+ A E+F+ M +  Y P V  + +L+  + K  R DL+++V   M+     PN  TYT
Sbjct: 658 KIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYT 717

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            +++G++   E+E      K L L  ++ E      V+ Y
Sbjct: 718 AMIDGLSKVGEIE------KALNLLSLMEEKGCSPNVVTY 751



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 192/404 (47%), Gaps = 22/404 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG----------------I 129
             RMV     P+ V  + L+  LCKA +++KA +V E ++ +                 I
Sbjct: 545 FHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTI 604

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  +Y  L++ LCK   V  A +L++ M   G   N + Y++L+ G C +G ++ + +
Sbjct: 605 APNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQE 664

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              R+ + G +P+  TY+ L++  +K+  +  AMK+L +++     PN+V+Y  ++ GL 
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLS 724

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G  E+A+     +  KG  PNVV+Y  L+  L   G+ + + +L  +M+    +P  V
Sbjct: 725 KVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYV 784

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY +LI      G  D A  +LDEM    +      Y+  +     +    L +  L++M
Sbjct: 785 TYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGL--LEEM 842

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL---GNKQNSSPQEFYKYVITSLCRK 425
                 P    Y  L       G+++ A  + + L    +  N +    Y  +I +LC  
Sbjct: 843 ESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLA 902

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
            +  +AF L  EMT+ G  PD   + SL++GL      +EAL++
Sbjct: 903 SQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 190/412 (46%), Gaps = 10/412 (2%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV   C+ G    A++ + +++D+GY  + VTYN+LV+ L   G +    +    +   G
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              +  T  +  +A  K      A+ +L+    +    + V    +++GL +     EA+
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFNEAM 291

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F   +      PNVV+Y  LL     + ++     ++  M     +P    +N L+   
Sbjct: 292 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGY 351

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMFHR 372
              G   +A K+ + M      P   +YN  I  +C + ++      DLV K  ++M   
Sbjct: 352 CNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAA 411

Query: 373 RCKPNE-GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C  N+  T N    LCGVGK ++AF I++ +  K        Y  VIT LC+  K  ++
Sbjct: 412 SCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKS 471

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F L  EM + G  PD YTY+ LI   C  GLIE+A   F  M      P+V  + ALL  
Sbjct: 472 FLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHA 531

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             KS++   + ++F  M++    PN  TY+ L++G+    E++ + EV ++L
Sbjct: 532 YLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 155/330 (46%), Gaps = 12/330 (3%)

Query: 51  TISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCK 110
           TI+P    Y       G   D   +  K++DA   L+ M++ G +P+ +    L+   CK
Sbjct: 603 TIAPNVVTY-------GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
             K+  A +V   M   G +P   +YT L++ + K G +  AM+++ +M +     N VT
Sbjct: 656 IGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVT 715

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           Y +++ GL  +G + ++L  L  + +KG  PN  TY+ L++   K     A++KL   + 
Sbjct: 716 YTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMN 775

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           +KG  PN V+Y VL+   C  G  +EA     ++    +  ++  Y+  ++      ++ 
Sbjct: 776 SKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFI 833

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR---PSAASYN 347
            +  LL EM+  +  P    Y +LI S +  G+ + AL++  E+V+        S   Y 
Sbjct: 834 ASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYA 893

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +I  LC   +V+       +M  +   P+
Sbjct: 894 SLIQALCLASQVEEAFTLYTEMTRKGIVPD 923



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 5/263 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L  M++    P+VV  T ++  L K  +++KA+ ++ +M   G  
Sbjct: 686 DRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCS 745

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++ L K G    +++L ++M   G   N VTY  L+   C  G L+++   
Sbjct: 746 PNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLL 805

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD +       +   Y   ++   K+    A++ LL+++ +    P    Y +L+    K
Sbjct: 806 LDEMKHTHWPKHLQGYHCAVQGFSKK--FIASLGLLEEMESHETVPIAPVYGMLIDSFSK 863

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVS---YNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            GR E A+   ++L       N+ S   Y  L+++LC+  + EEA  L  EM      P 
Sbjct: 864 AGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPD 923

Query: 308 IVTYNILIGSLAYHGKTDHALKV 330
           ++ +  L+  L    K D AL++
Sbjct: 924 LIVFVSLVKGLIEVNKWDEALQL 946



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 118/288 (40%), Gaps = 6/288 (2%)

Query: 255 EEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           E  +RFF     + G+      Y+ L   L  E     A  LL E+   DR       N+
Sbjct: 115 ELCVRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNV 174

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+     HG  D AL+ L  +    +RPSA +YN ++  L S G+V++  +   +M    
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              +  T    A  LC VG+  +A  +++    +  +        +I+ L       +A 
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLE---KEDFNLDTVLCTQMISGLMEASLFNEAM 291

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             L+ M      P+  TY +L+ G   +        I  +M      P+   FN+L+ G 
Sbjct: 292 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGY 351

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           C +     + ++F  M   G  P    Y I +  I  Q+EL  +AE+L
Sbjct: 352 CNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELP-NAELL 398


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 214/448 (47%), Gaps = 7/448 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL+D+      MV     P +   + LL  + K  K    I + E M   GI  +  
Sbjct: 58  RYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+NC C+   +  A+  + KM   G+  + VT+ SL+ G C    +  +L   DR+
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM 177

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  PN   Y+ +++   K + V  A+ LL+ +   G +P+ V+YN L++GLC  GR 
Sbjct: 178 VEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A R    +  +   P+V ++N L+ +   EGR  EA EL  EM      P IVTY++L
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L  + + D A ++   MV     P   +Y+ +I   C   KV+  +K   +M  R  
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 375 KPNEGTYNGLAM-LCGVGKV---QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             N  TY  L    C  GK+   +E F  +   G   N      Y  ++  LC  GK  +
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIIT---YNVLLHGLCDNGKIEK 414

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  +L +M K G   D  TY+ +IRG+C  G + +A +++  +      PD+  + A++L
Sbjct: 415 ALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMML 474

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNET 518
           GL K      +  +F+ M E G +PNE 
Sbjct: 475 GLYKKGLRGEADALFRKMKEDGILPNEC 502



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 203/416 (48%), Gaps = 1/416 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K+  ++ +   MV    +P  + ++ L++ + K       + L E+M+  G P N  T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            L+   C    L+ +L FL ++++ G  P+  T+  LL    +   ++ A+ + D ++  
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G +PN+V YN ++ GLCK  + + A+     +   G  P+ V+YN L+  LC  GRW++A
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             +++ M   +  P + T+N LI +    G+   A ++ +EM++    P   +Y+ +I  
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
           LC   ++D   +    M  + C P+  TY+ L    C   KV+    +   +  +     
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I   CR GK   A ++   M   G  P+  TY+ L+ GLC  G IE+AL I  
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            M++     D+  +N ++ G+CK+     + +++  +  KG  P+  TYT ++ G+
Sbjct: 421 DMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGL 476



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 174/375 (46%), Gaps = 1/375 (0%)

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           Y  ++R       L+ SL     ++Q   +P+   +S LL A  K +     + L + + 
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
             G   NL + N+LL   C+  +   A+ F   +   G EP++V++  LL   C   R  
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +A  +   M      P +V YN +I  L    + D+AL +L+ M     RP A +YN +I
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNS 409
           + LC+ G+ D   + +  M  R   P+  T+N L   C   G++ EA  + + +  +   
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  +I  LC   +  +A Q+   M   G  PD  TYS LI G C    +E  +++
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M +     +   +  L+ G C++ + +++ E+F+ M+  G  PN  TY +L+ G+  
Sbjct: 349 FCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCD 408

Query: 530 QDELELSAEVLKELQ 544
             ++E +  +L ++Q
Sbjct: 409 NGKIEKALVILADMQ 423



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 143/325 (44%), Gaps = 34/325 (10%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P++  ++ LL+ + K  + +  I  +  +   G   N+ + NILL   C   +   A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L +M      P IVT+  L+       +   AL + D MV+  + P+   YN II  LC 
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
             +VD  +  L++M     +P+  TYN L                               
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSL------------------------------- 227

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
              I+ LC  G+   A +++  MTK    PD +T+++LI     EG I EA E++  M  
Sbjct: 228 ---ISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIR 284

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               PD+  ++ L+ GLC   R D + ++F  M+ KG  P+  TY+IL+ G     ++E 
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344

Query: 536 SAEVLKELQLRQVVSESAVERLVMQ 560
             ++  E+  R VV  +    +++Q
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTVLIQ 369


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 211/402 (52%), Gaps = 7/402 (1%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +++  ++  LC  G    A++L+ +M       N VTYN+++ G C  G +   ++ +  
Sbjct: 117 TTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMRE 172

Query: 194 LIQKG-LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKE 251
           + ++G + P+ +TY+ ++    K   V  A K+ D+++ +G  +PN V YN L+ G C +
Sbjct: 173 MRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQ 232

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  E A+R+  ++  +G    V +YN+ + +L MEGR  EA+ L+ EM     +P   TY
Sbjct: 233 GNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTY 292

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NILI      GK   A+K+ + MV    R +  +Y  +I  L  +G V    +  +    
Sbjct: 293 NILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVR 352

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R  +P+   YN L    C  G +  AF I+  +  K+ +     Y  ++  LC  G+  +
Sbjct: 353 RGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDE 412

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  L+ EMTK G  PD  +Y++LI G  M+G I++A+++   M    + P +  +NA++ 
Sbjct: 413 ARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIK 472

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           GLC + +   + ++ + M+  G  P+++TY  L+EG+  +DE
Sbjct: 473 GLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 185/370 (50%), Gaps = 7/370 (1%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           P+ V    ++   C   +++  I++M EM    GI PD  +Y  +++  CK G V  A +
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATK 204

Query: 155 LVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           + ++M   G    N V YN+L+ G C  GNL  +L++   ++ +G+     TY+  +   
Sbjct: 205 VFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTL 264

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
           + E     A  L++++  KG  P+  +YN+L+ G CKEG+ ++A++ F  +  KG    V
Sbjct: 265 FMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV 324

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V+Y  L+ +L M+G  +E + L  +       P +  YN LI S    G  D A +++ E
Sbjct: 325 VTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGE 384

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV--- 390
           M K R  P   +YN ++  LC  G++D     +++M  R  +P+  +YN L  + G    
Sbjct: 385 MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTL--ISGYSMK 442

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G +++A  +   +  K  +     Y  +I  LC  G+   A  L+ EM   G TPD  TY
Sbjct: 443 GDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTY 502

Query: 451 SSLIRGLCME 460
            SLI GL  E
Sbjct: 503 ISLIEGLTTE 512



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 151/308 (49%), Gaps = 1/308 (0%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           K+ DA    + M+++G  +P+ V    L+   C    ++ A++    MV  G+    ++Y
Sbjct: 198 KVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATY 257

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              V+ L  +G    A  LVE+M + G   +  TYN L+ G C  G   ++++  + ++ 
Sbjct: 258 NLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVG 317

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG+     TY+ L+ A   +  V    +L +D + +G +P+L  YN L+   C  G  + 
Sbjct: 318 KGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDR 377

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A     ++  K   P+ V+YN L+R LC+ GR +EA  L+ EM      P +V+YN LI 
Sbjct: 378 AFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLIS 437

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             +  G    A+KV DEM+   F P+  +YN +I  LC  G+       + +M      P
Sbjct: 438 GYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITP 497

Query: 377 NEGTYNGL 384
           ++ TY  L
Sbjct: 498 DDSTYISL 505



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 156/313 (49%), Gaps = 9/313 (2%)

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           ++N++L  LC  G+   A+   R +PS    PN V+YN ++   C  GR +   E++ EM
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREM 173

Query: 300 -DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSEG 357
            + G  +P   TY  +I      GK + A KV DEM+ +G+  P+A  YN +I   C +G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-Y 415
            +++ ++   +M  R       TYN     L   G+  EA A+++ +G K   +P  F Y
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEK-GLAPDAFTY 292

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I   C++GK  +A ++   M   G      TY+SLI  L M+G+++E   +F     
Sbjct: 293 NILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVR 352

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              +PD+  +NAL+   C     D + E+   M +K   P++ TY  L+ G+     L+ 
Sbjct: 353 RGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDE 412

Query: 536 SAEVLKELQLRQV 548
           +  +++E+  R +
Sbjct: 413 ARGLIEEMTKRGI 425



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 141/268 (52%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV +G    V      ++ L    +  +A  ++E M   G+ PDA +Y  L+N  CK+G 
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGK 304

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              AM++ E M   G     VTY SL+  L M G + ++ +  +  +++G+ P+ F Y+ 
Sbjct: 305 EKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNA 364

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+ +      +  A +++ ++  K   P+ V+YN L+ GLC  GR +EA     ++  +G
Sbjct: 365 LINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRG 424

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P++VSYN L+    M+G  ++A ++  EM G   +PT++TYN +I  L  +G+   A 
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAE 484

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSE 356
            ++ EMV     P  ++Y  +I  L +E
Sbjct: 485 DLVKEMVGNGITPDDSTYISLIEGLTTE 512



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 127/238 (53%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A   +E M  KG  PD      L+   CK  K KKA+K+ E+MV  GI     +YT L+
Sbjct: 272 EAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLI 331

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           + L  KG V    +L       G   +   YN+L+   C  G+++++ + +  + +K + 
Sbjct: 332 HALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRIT 391

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ L+        +  A  L++++  +G +P+LVSYN L++G   +G  ++A++ 
Sbjct: 392 PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKV 451

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             ++  KGF P +++YN +++ LC+ G+  +A +L+ EM G   +P   TY  LI  L
Sbjct: 452 RDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 115/212 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K   A    E MV KG +  VV  T+L++ L     +++  ++    V  GI PD  
Sbjct: 301 KEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLF 360

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+N  C  G++  A +++ +ME      + VTYN+L+RGLC+LG L+++   ++ +
Sbjct: 361 MYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEM 420

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P+  +Y+ L+     +  +  A+K+ D+++ KG  P L++YN ++ GLC  G+ 
Sbjct: 421 TKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQG 480

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            +A    +++   G  P+  +Y  L+  L  E
Sbjct: 481 GDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 233/489 (47%), Gaps = 13/489 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A    + +  +   PD +  + L+  L K +++  A+ +++ M  S + PD   Y  
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 139 LVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           L+    K G     M++ +K+ +D G   N  TYN ++ GLC  G   +  +  +R++  
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L P+  TY  L+    +   V  A ++  +II  G   +   YN L+ G C+ GR +EA
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL--LAEMDGGDRSPTIVTYNILI 315
            +F+      G   N+ +YNI+++ L   G  +EA EL  L E D     P  VT+  LI
Sbjct: 354 WKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVA-CIPDTVTFGTLI 411

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L  +G  + A  + +E      +    SY+ +I  LC+ G++   VK  ++M    CK
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN   YN L +  C V +  +A  I   + +   S     Y  +I  LC+  K  +A  +
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM + GFTPD  TY SLIRGL  +  I++AL I+  +     K DV   N L+ GLC 
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591

Query: 495 SRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           + + D +L VF  M EK    PN  TY  L++G+     ++      K   L   ++E  
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID------KAATLWTSITEDG 645

Query: 554 VERLVMQYD 562
           +E  ++ Y+
Sbjct: 646 LEPDIISYN 654



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 195/382 (51%), Gaps = 8/382 (2%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  TYN ++R LC  G+L++++   D L ++ + P+  TYS L+    K+  +  A+ LL
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLL 216

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCM 285
           D++     +P++V YN LL G  K G  E+ +R +  L    G  PN+ +YN++L  LC 
Sbjct: 217 DEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            GR++E  E+   M   +  P ++TY ILI  L   G  D A +V  E++K      AA 
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQS 402
           YN ++   C  G+V    K  D       + N  TYN   M+ G+   G V EA  +   
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYN--IMIKGLFDSGMVDEAIELWDL 393

Query: 403 LGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           L       P    +  +I  LC+ G   +AF +  E    G   D ++YSS+I GLC  G
Sbjct: 394 LEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG 453

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            + +A++++  M++   KP+   +NAL+ G C+  RT  ++ ++  M + G  P   TY 
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513

Query: 522 ILVEGIAHQDELELSAEVLKEL 543
            L++G+   ++ + ++ V +E+
Sbjct: 514 TLIDGLCKAEKYQEASSVAREM 535



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 214/470 (45%), Gaps = 10/470 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG----IIPDASSY 136
           DAF  L  ++  G  P +     LL    +A +   A      +        I P+  +Y
Sbjct: 104 DAFRALPSIL--GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++  LC +G++  A+ L + +       + +TY++L+ GL     L+ +L  LD + +
Sbjct: 162 NIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPR 221

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-GGKPNLVSYNVLLTGLCKEGRTE 255
             + P+   Y+ LL   +K       M++ D ++   G +PNL +YNV+L GLCK GR +
Sbjct: 222 SRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFK 281

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           E    +  + +   +P+V++Y IL+  LC  G  + A  + +E+           YN L+
Sbjct: 282 EVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLV 341

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-RC 374
                 G+   A K  D       R +  +YN +I  L   G VD  ++  D +     C
Sbjct: 342 KGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVAC 400

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  T+  L   LC  G   +AF I +             Y  +I  LC  G+   A +
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  +M K G  P+S+ Y++LI G C      +A+ I+  M +    P V  +N L+ GLC
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K+ +   +  V + M+E G  P+ TTY  L+ G+    +++ +  + K++
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 202/412 (49%), Gaps = 6/412 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ERMV+   +PDV+    L++ LC++  +  A +V   ++ +G++ DA+ Y  LV   C+ 
Sbjct: 288 ERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQA 347

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL--VPNAF 204
           G V  A +  +     G   N  TYN +++GL   G ++++++  D L++K +  +P+  
Sbjct: 348 GRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTV 405

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T+  L+    +    + A  + ++    G + ++ SY+ ++ GLC  GR  +A++ +  +
Sbjct: 406 TFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G +PN   YN L+   C   R  +A  + ++M     SPT++TYN LI  L    K 
Sbjct: 466 DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKY 525

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A  V  EMV+  F P   +Y  +I  L S+ K+D  +    Q+ ++  K +   +N L
Sbjct: 526 QEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL 585

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
              LC  GKV EA  +   +  K+N  P    Y  ++  L   G   +A  L   +T+ G
Sbjct: 586 IHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG 645

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             PD  +Y++ I+GLC    I E +++   +      P V  +N L+  + K
Sbjct: 646 LEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 163/340 (47%), Gaps = 18/340 (5%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +V +AF+ + + +AA        A + L  I+  G  P + S+N LL    +  R  +A 
Sbjct: 88  VVLSAFSRAIMPDAALD------AFRALPSIL--GCNPGIRSHNALLDAFVRARRFSDAD 139

Query: 259 RFFRDLPSKGF----EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            FF  L    F     PN+ +YNI+LRSLC  G  + A  L   +     +P  +TY+ L
Sbjct: 140 AFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTL 199

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR- 373
           +  LA   + DHAL +LDEM + R +P    YN ++      G+ + V++  D++     
Sbjct: 200 MCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPG 259

Query: 374 CKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            +PN  TYN  L  LC  G+ +E   + + +           Y  +I  LCR G    A 
Sbjct: 260 ARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAA 319

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++  E+ K G   D+  Y+SL++G C  G ++EA + F     +    ++  +N ++ GL
Sbjct: 320 RVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNLRTYNIMIKGL 378

Query: 493 CKSRRTDLSLEVFQMMIEK--GQMPNETTYTILVEGIAHQ 530
             S   D ++E++ ++ EK    +P+  T+  L+ G+   
Sbjct: 379 FDSGMVDEAIELWDLL-EKDVACIPDTVTFGTLIHGLCQN 417



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 138/281 (49%), Gaps = 1/281 (0%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           N AF   E     G + DV   ++++  LC   ++  A+KV E M   G  P++  Y  L
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  C+      A+++  KM D G     +TYN+L+ GLC      ++      +++ G 
Sbjct: 481 ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGF 540

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY  L+   + ++ +  A+ +   I+ KG K +++ +N+L+ GLC  G+ +EA+ 
Sbjct: 541 TPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH 600

Query: 260 FFRDLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F D+   K   PN+V+YN L+  L   G  ++A  L   +      P I++YN  I  L
Sbjct: 601 VFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGL 660

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
               +    +++LDE++     P+  ++N ++  +   G +
Sbjct: 661 CSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 1/246 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA    E+M   G KP+      L+   C+  +   A+++   M  +G  P   +Y 
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK      A  +  +M + G+  +  TY SL+RGL     ++ +L    +++ K
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEE 256
           GL  +   ++ L+        V  A+ +  D+  K    PNLV+YN L+ GL + G  ++
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   +  +   G EP+++SYN  ++ LC   R  E  +LL E+      PT++T+NIL+ 
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVR 693

Query: 317 SLAYHG 322
           ++  +G
Sbjct: 694 AVIKYG 699



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 1/212 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++ +DA     +M   G  P V+    L+  LCKA K ++A  V   MV +G  PD ++Y
Sbjct: 488 YRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTY 547

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ-FLDRLI 195
             L+  L     +  A+ + +++   G   + + +N L+ GLC  G ++++L  F D   
Sbjct: 548 GSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKE 607

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K   PN  TY+ L++  Y+   +  A  L   I   G +P+++SYN  + GLC   R  
Sbjct: 608 KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIH 667

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           E I+   ++ S+G  P V+++NIL+R++   G
Sbjct: 668 EGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 78/141 (55%), Gaps = 1/141 (0%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDAS 134
           D K++DA    ++++ KG K DV+    L++ LC A K+ +A+ V  +M       P+  
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L + G +  A  L   + + G   + ++YN+ ++GLC    +++ +Q LD +
Sbjct: 617 TYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEV 676

Query: 195 IQKGLVPNAFTYSFLLEAAYK 215
           + +G++P   T++ L+ A  K
Sbjct: 677 LSRGIIPTVITWNILVRAVIK 697



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 38/69 (55%)

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P++  +N +L  LC     D ++ +F  +  +   P+  TY+ L+ G+A QD L+ + ++
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDL 215

Query: 540 LKELQLRQV 548
           L E+   +V
Sbjct: 216 LDEMPRSRV 224


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 235/463 (50%), Gaps = 25/463 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA      M  +  +PDV     L+  LCKA+++ +A+ +++ M   G  P   ++  
Sbjct: 215 VDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 274

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N LCKKG++  A +LV+ M   G   N VTYN+L+ GLC+ G L +++  LDR++   
Sbjct: 275 LINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 334

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
            VPN  TY  ++    K+        +L  +  +G   N   Y+ L++GL KEG+++EA+
Sbjct: 335 CVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAM 394

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+++  KG+E N + Y+ ++  LC +G+ ++A E+L+EM     +P   T + L+   
Sbjct: 395 HLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGF 454

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G +  A++V  +M K  F  +   Y+ +I  LC +GKV   +    QM  + CKP+ 
Sbjct: 455 FEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDV 514

Query: 379 GTY----NGLAMLCGVGKVQEAFAII-QSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
             Y    NGL++    G V++A  +  + L    +S P    Y  ++ +LC++    +A 
Sbjct: 515 VAYSSMINGLSI---AGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAI 571

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF-NALLLG 491
            LL  M   G  PD  T +  +R               ++ E+ D   D   F + L++ 
Sbjct: 572 DLLNSMLDRGCDPDLVTCTIFLR---------------MLREKLDPPQDGREFLDELVVR 616

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           L K +R   + ++ ++M++K   P  +T+  +VE +    +++
Sbjct: 617 LLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQ 659



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 219/441 (49%), Gaps = 9/441 (2%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           I P+  ++  ++  +CK G V  A+Q+   M       +  TY +L+ GLC    +++++
Sbjct: 195 ISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAV 254

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
             LD +   G  P+  T++ L+    K+  +  A KL+D++  KG  PN V+YN L+ GL
Sbjct: 255 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGL 314

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C +G+ E+AI     + S    PNVV+Y  ++  L  +GR  +   +LA M+        
Sbjct: 315 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNE 374

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
             Y+ LI  L   GK+  A+ +  EM    +  +   Y+ +I  LC +GK D  V+ L +
Sbjct: 375 YVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSE 434

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M ++ C PN  T + L       G    A  + + +     +  +  Y  +I  LC+ GK
Sbjct: 435 MTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGK 494

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNF 485
             +A  +  +M   G  PD   YSS+I GL + GL+E+A++++  ++ +  D +PDV  +
Sbjct: 495 VKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTY 554

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH-----QDELELSAEVL 540
           N LL  LCK      ++++   M+++G  P+  T TI +  +       QD  E   E++
Sbjct: 555 NILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELV 614

Query: 541 KELQLRQ-VVSESAVERLVMQ 560
             L  RQ V+  S +  +++Q
Sbjct: 615 VRLLKRQRVLGASKIVEVMLQ 635



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 146/299 (48%), Gaps = 17/299 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K  +A    + M  KG++ + +  + ++  LC+  K   A++V+  M + G  P+A 
Sbjct: 386 KEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAY 445

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L+    + GN   A+++ + M  + +  N V Y+ L+ GLC  G + +++    ++
Sbjct: 446 TCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQM 505

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG--GKPNLVSYNVLLTGLCKEG 252
           + KG  P+   YS ++        V  AM+L ++++ +G   +P++V+YN+LL  LCK+ 
Sbjct: 506 LGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQS 565

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
               AI     +  +G +P++V+  I LR L          +L    DG +        +
Sbjct: 566 SISRAIDLLNSMLDRGCDPDLVTCTIFLRML--------REKLDPPQDGRE------FLD 611

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV-KCLDQMF 370
            L+  L    +   A K+++ M++    P  +++  ++  LC   KV  V+ KC   ++
Sbjct: 612 ELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQKCWSILY 670



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 449 TYSSLIRGLCMEGLIEEALEIF---VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +++S++  +  EGL   ALE +   +  +     P+V  FN ++  +CK    D +++VF
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           + M  +   P+  TY  L++G+   D ++ +  +L E+Q+
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 262


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 211/447 (47%), Gaps = 37/447 (8%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            F   +R    G K  V     L+  L K  ++     V + M+   I P   S+  ++N
Sbjct: 112 GFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVIN 171

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ---FLDRLIQKG 198
            LCK G +  A  ++E M+  G   N +TYN+L+ G C +G + +  +    L  +   G
Sbjct: 172 GLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG 231

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + PN  T++ L++   K++ V AAMK+  ++  +G KPN+V+YN L+ GLC  G+  EA 
Sbjct: 232 ICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEAT 291

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                + +   +PN++++N LL   C     ++A EL  +M     +P + TYNILI + 
Sbjct: 292 ALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAY 351

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
                 + A  +   M+     P  ++YN +IA LC +G ++     + +M  +  K + 
Sbjct: 352 CKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADL 411

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            TYN                +I SL N                   KG+  +A +LL EM
Sbjct: 412 ITYN---------------ILIDSLCN-------------------KGEMKKALRLLDEM 437

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            + G  P   TY+++I G C EG +  AL +   ME+     +V  +N L+ G CK  + 
Sbjct: 438 CRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKL 497

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVE 525
           + +  +   M+EKG +PN  TY I+ E
Sbjct: 498 EDANGLLNEMLEKGLIPNRMTYEIVTE 524



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 187/391 (47%), Gaps = 37/391 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK---MKKAIKVMEMMVSSGIIPDAS 134
           KLN A   +E M  +G   +V+    L+   CK  K   M KA  +++ M + GI P+  
Sbjct: 178 KLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEV 237

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++  CK  NV  AM++  +M   G   N VTYNSL+ GLC  G +N++    D++
Sbjct: 238 TFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM 297

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   L PN  T++ LL    K + V  A +L DD+  +G  PN+ +YN+L+   CK+   
Sbjct: 298 VNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENM 357

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A   +R +  KG  P+V +YN L+  LC +G  E A  L++EMD       ++TYNIL
Sbjct: 358 EDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNIL 417

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I SL   G+   AL++LDEM +   +PS  +YN +I   C EG +   +    QM     
Sbjct: 418 IDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGR 477

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             N  TYN L                                  I   C+K K   A  L
Sbjct: 478 LANVATYNVL----------------------------------IKGFCKKDKLEDANGL 503

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           L EM + G  P+  TY  +   +  +G + +
Sbjct: 504 LNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 201/422 (47%), Gaps = 9/422 (2%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           ++ II D   + Y  N   + G      +  ++  DYG   +  + N L+ GL  +G + 
Sbjct: 91  ANSIIVDILVWAYAKNLRTRLG-----FEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIG 145

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
                   +I++ + P   +++ ++    K   ++ A  +++D+  +G   N+++YN L+
Sbjct: 146 DMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLI 205

Query: 246 TGLCKEGRTEE---AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            G CK G+  +   A    +++ + G  PN V++NIL+   C +     A ++ AEM+  
Sbjct: 206 DGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ 265

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P +VTYN LI  L  +GK + A  + D+MV    +P+  ++N ++   C    V   
Sbjct: 266 GVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQA 325

Query: 363 VKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            +  D M  +   PN  TYN L    C    +++AFA+ + +  K        Y  +I  
Sbjct: 326 GELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAG 385

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LCRKG    A  L+ EM       D  TY+ LI  LC +G +++AL +   M     KP 
Sbjct: 386 LCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPS 445

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              +N ++ G CK      +L +   M + G++ N  TY +L++G   +D+LE +  +L 
Sbjct: 446 QLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLN 505

Query: 542 EL 543
           E+
Sbjct: 506 EM 507



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 145/285 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  ++ A      M  +G KP+VV   +L+  LC   K+ +A  + + MV+S + P+  
Sbjct: 248 KDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNII 307

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N  CK   V  A +L + M   G   N  TYN L+   C   N+  +      +
Sbjct: 308 THNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIM 367

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG+ P+  TY+ L+    ++  + AA  L+ ++  K  K +L++YN+L+  LC +G  
Sbjct: 368 LGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEM 427

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+R   ++  KG +P+ ++YN ++   C EG    A  L ++M+   R   + TYN+L
Sbjct: 428 KKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVL 487

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           I       K + A  +L+EM++    P+  +Y  +   +  +G V
Sbjct: 488 IKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 148/322 (45%), Gaps = 37/322 (11%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G K ++ S N L++GL K G   +    ++++  +  EP ++S+NI++  LC  G+  +A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK---VLDEMVKGRFRPSAASYNPI 349
            +++ +M     S  ++TYN LI      GK     K   +L EM      P+  ++N +
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNS 409
           I   C +  V   +K   +M  +  KPN  TYN L                         
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSL------------------------- 277

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                    I  LC  GK  +A  L  +M      P+  T+++L+ G C   ++++A E+
Sbjct: 278 ---------INGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M +    P+V  +N L+   CK    + +  ++++M+ KG  P+ +TY  L+ G+  
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388

Query: 530 QDELELSAEVLKELQLRQVVSE 551
           + +LE +  ++ E+  + + ++
Sbjct: 389 KGDLEAARNLVSEMDTKHLKAD 410



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 6/286 (2%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T+E  +    +    F  N +  +IL+ +     R     E            ++ + N 
Sbjct: 74  TQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNP 133

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L   G+      V  EM++ R  P+  S+N +I  LC  GK++     ++ M  R 
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 374 CKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKT 428
              N  TYN    G   +  +GK+ +A AI++ +       P E  +  +I   C+    
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEM-RADGICPNEVTFNILIDGFCKDKNV 252

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A ++  EM + G  P+  TY+SLI GLC  G + EA  +   M     KP++   NAL
Sbjct: 253 SAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNAL 312

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           L G CK++    + E+F  M ++G  PN TTY IL++     + +E
Sbjct: 313 LNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENME 358



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 103/203 (50%), Gaps = 16/203 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  + DAF     M+ KG  PDV     L+  LC+   ++ A  ++  M +  + 
Sbjct: 349 DAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLK 408

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L++ LC KG +  A++L+++M   G   + +TYN+++ G C  GNL  +L  
Sbjct: 409 ADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNL 468

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++ + G + N  TY+ L++   K+  +  A  LL++++ KG  PN ++Y ++      
Sbjct: 469 RSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV------ 522

Query: 251 EGRTEEAIRFFRDLPSKGFEPNV 273
              TEE +        KGF P++
Sbjct: 523 ---TEEMME-------KGFVPDI 535


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 224/444 (50%), Gaps = 11/444 (2%)

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
           + I P+  S+  ++  +CK G V  A+++  +M       +  TY +L+ GLC    +++
Sbjct: 182 TNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDE 241

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           ++  LD +  +G  P++ T++ L+    K+  +    KL+D++  KG  PN V+YN ++ 
Sbjct: 242 AVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIIN 301

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           GLC +G+ ++A+     + +    PN V+Y  L+  L  +GR  +   LL+ ++      
Sbjct: 302 GLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA 361

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
               Y+ LI  L    K++ A+ +  +MV+   +P+   Y+ +I  LC EGK+D   + L
Sbjct: 362 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 421

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR 424
            +M ++ C PN  TY+ L       G  Q+A  + + +  K N  P E  Y  +I  LC 
Sbjct: 422 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA-KNNCVPNEICYSVLIHGLCE 480

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDV 482
            GK  +A  +   M   G  PD   YSS+I GLC  G +E  L++F  ++ +E D +PDV
Sbjct: 481 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDV 540

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH-----QDELELSA 537
             +N LL  LCK      ++++   M+++G  P+  T  I +  +       QD  E   
Sbjct: 541 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 600

Query: 538 EVLKELQLRQ-VVSESAVERLVMQ 560
           E++  L  RQ +V  + +  +++Q
Sbjct: 601 ELVVRLHKRQRIVGAAKIIEVMLQ 624



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 221/440 (50%), Gaps = 19/440 (4%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  +  +PDV     L+  LCK +++ +A+ +++ M   G  P + ++  L+N LCKKG+
Sbjct: 214 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 273

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +    +LV+ M   G   N VTYN+++ GLC+ G L++++  LDR++    VPN  TY  
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 333

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K+      + LL  +  +G   N  +Y+ L++GL KE ++EEA+  ++ +  KG
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +PN+V Y+ L+  LC EG+ +EA E+L EM     +P   TY+ LI      G +  A+
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 453

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           +V  EM K    P+   Y+ +I  LC +GK+   +     M  R  +P+   Y+ +   L
Sbjct: 454 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 513

Query: 388 CGVGKVQEAFAII-QSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
           C  G V+    +  + L  + +S P    Y  ++ +LC++     A  LL  M   G  P
Sbjct: 514 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNP 573

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF-NALLLGLCKSRRTDLSLEV 504
           D  T +  +  L                E+ +   D   F + L++ L K +R   + ++
Sbjct: 574 DLITCNIFLNAL---------------REKLNPPQDGREFLDELVVRLHKRQRIVGAAKI 618

Query: 505 FQMMIEKGQMPNETTYTILV 524
            ++M++K   PN +T+  ++
Sbjct: 619 IEVMLQKFLPPNASTWERII 638



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 126/258 (48%), Gaps = 4/258 (1%)

Query: 290 EEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR--FRPSAASY 346
           E+A EL   M D      T+ ++N ++  +   G    AL+  +  V G+    P+  S+
Sbjct: 132 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSF 191

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
           N +I  +C  G VD  ++   +M  ++C+P+  TY  L   LC   ++ EA  ++  +  
Sbjct: 192 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 251

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           +        +  +I  LC+KG   +  +L+  M   G  P+  TY+++I GLC++G +++
Sbjct: 252 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 311

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A+ +   M      P+   +  L+ GL K  R+   + +   + E+G   NE  Y+ L+ 
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 371

Query: 526 GIAHQDELELSAEVLKEL 543
           G+  +++ E +  + K++
Sbjct: 372 GLFKEEKSEEAMGLWKKM 389



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMT---KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           +  V+  + ++G  ++A +  YE     K   +P+  +++ +I+ +C  GL++ A+E+F 
Sbjct: 154 FNSVLNVIIQEGLFHRALEF-YECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 212

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M     +PDV  +  L+ GLCK  R D ++ +   M  +G  P+  T+ +L+ G+  + 
Sbjct: 213 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 272

Query: 532 ELELSAEVLKELQLRQVV 549
           ++    +++  + L+  V
Sbjct: 273 DMVRVTKLVDNMFLKGCV 290


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 224/444 (50%), Gaps = 11/444 (2%)

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
           + I P+  S+  ++  +CK G V  A+++  +M       +  TY +L+ GLC    +++
Sbjct: 166 TNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDE 225

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           ++  LD +  +G  P++ T++ L+    K+  +    KL+D++  KG  PN V+YN ++ 
Sbjct: 226 AVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIIN 285

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           GLC +G+ ++A+     + +    PN V+Y  L+  L  +GR  +   LL+ ++      
Sbjct: 286 GLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA 345

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
               Y+ LI  L    K++ A+ +  +MV+   +P+   Y+ +I  LC EGK+D   + L
Sbjct: 346 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 405

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR 424
            +M ++ C PN  TY+ L       G  Q+A  + + +  K N  P E  Y  +I  LC 
Sbjct: 406 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA-KNNCVPNEICYSVLIHGLCE 464

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDV 482
            GK  +A  +   M   G  PD   YSS+I GLC  G +E  L++F  ++ +E D +PDV
Sbjct: 465 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDV 524

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH-----QDELELSA 537
             +N LL  LCK      ++++   M+++G  P+  T  I +  +       QD  E   
Sbjct: 525 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 584

Query: 538 EVLKELQLRQ-VVSESAVERLVMQ 560
           E++  L  RQ +V  + +  +++Q
Sbjct: 585 ELVVRLHKRQRIVGAAKIIEVMLQ 608



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 221/443 (49%), Gaps = 19/443 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
              M  +  +PDV     L+  LCK +++ +A+ +++ M   G  P + ++  L+N LCK
Sbjct: 195 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 254

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG++    +LV+ M   G   N VTYN+++ GLC+ G L++++  LDR++    VPN  T
Sbjct: 255 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 314

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+    K+      + LL  +  +G   N  +Y+ L++GL KE ++EEA+  ++ + 
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG +PN+V Y+ L+  LC EG+ +EA E+L EM     +P   TY+ LI      G + 
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A++V  EM K    P+   Y+ +I  LC +GK+   +     M  R  +P+   Y+ + 
Sbjct: 435 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 494

Query: 386 M-LCGVGKVQEAFAII-QSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
             LC  G V+    +  + L  + +S P    Y  ++ +LC++     A  LL  M   G
Sbjct: 495 HGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 554

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF-NALLLGLCKSRRTDLS 501
             PD  T +  +  L                E+ +   D   F + L++ L K +R   +
Sbjct: 555 CNPDLITCNIFLNAL---------------REKLNPPQDGREFLDELVVRLHKRQRIVGA 599

Query: 502 LEVFQMMIEKGQMPNETTYTILV 524
            ++ ++M++K   PN +T+  ++
Sbjct: 600 AKIIEVMLQKFLPPNASTWERII 622



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMT---KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           +  V+  + ++G  ++A +  YE     K   +P+  +++ +I+ +C  GL++ A+E+F 
Sbjct: 138 FNSVLNVIIQEGLFHRALEF-YECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M     +PDV  +  L+ GLCK  R D ++ +   M  +G  P+  T+ +L+ G+  + 
Sbjct: 197 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 256

Query: 532 ELELSAEVLKELQLRQVV 549
           ++    +++  + L+  V
Sbjct: 257 DMVRVTKLVDNMFLKGCV 274


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/467 (31%), Positives = 228/467 (48%), Gaps = 7/467 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+  G   D    T  +   C++  +  A  ++  M S G+   A  Y  L+  LCK
Sbjct: 186 FDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCK 245

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A+++   M + G   + VTY +LV G C +  L  +L+    +I+ G VP+   
Sbjct: 246 NMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            SF+++   K+  V  A  L   +   G  PN+ +YN L+  LCK  R ++A R F+++ 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G EPN V+Y IL+ +LC  G  E+A  L  +M       T+  YN LI      G  D
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L  MVK    P+AASY+P+IA LC  G +   ++   +M  R    N  T+  L 
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALI 485

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C   K+ EA  +   + +  N  P E  +  +I   C  G   +AFQL  +M + G 
Sbjct: 486 NGFCKDKKMDEAARLFDKMID-SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN--ALLLGLCKSRRTDLS 501
            PD+YTY SLI GLC+   + +A E FV   E  Y   ++NF+  ALL GL +  R   +
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANE-FVADLENSYAV-LNNFSLTALLYGLFREGRFTET 602

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             ++  M  +G   +  ++TI+V     Q + E S  + +E++ + V
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 214/444 (48%), Gaps = 2/444 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MV +G  P     + L+  LC+   +  A+++   M   GI  +  ++T L+N  CK
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A +L +KM D     N VT+N ++ G C++GN+ ++ Q  D++++ GL P+ +T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+       GV  A + + D+       N  S   LL GL +EGR  E    + ++ 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMA 610

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G + ++VS+ I++ +   +   E++  L  EM      P  + Y  +I +L+      
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            AL   D+MV   + P+  ++  +I  LC  G +        +M      PN+ TYN  L
Sbjct: 671 QALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 730

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                 G +++A  +  ++     +S   F   +I  LC+ GK  +A  L+ ++T+ GF+
Sbjct: 731 DYFATEGDMEKAKDLHSAMLQGHLASIVSF-NILIKGLCKAGKIQEAIDLMRKITESGFS 789

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  +YS++I  LC  G I +A E++  M     KPDV  +N  +        +D +L +
Sbjct: 790 PDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGI 849

Query: 505 FQMMIEKGQMPNETTYTILVEGIA 528
           +  MI  G  PN  TY  L+ GI+
Sbjct: 850 YTNMIRSGVQPNWDTYRALLSGIS 873



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 225/508 (44%), Gaps = 35/508 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   + +AF    ++   G  P+V     L+  LCK  +   A ++ + M   G+ 
Sbjct: 311 DELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLE 370

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++ LCK+G +  A+ L +KM D G       YNSL+ G C  G+L+++   
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++++GL P A +YS L+    +   + +AM+L  ++  +G   N  ++  L+ G CK
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           + + +EA R F  +      PN V++N+++   C+ G   +A +L  +M      P   T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI  L        A + + ++       +  S   ++  L  EG+        D+M 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMA 610

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTY 429
            R  K +  ++  +         +E   ++     +Q   P + FY  +I +L ++    
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG-------LIEEALEIFVVMEEYDYKPDV 482
           QA     +M   G++P++ T++ LI  LC  G       L +E L   V+  ++ Y   +
Sbjct: 671 QALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 730

Query: 483 D---------------------------NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           D                           +FN L+ GLCK+ +   ++++ + + E G  P
Sbjct: 731 DYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSP 790

Query: 516 NETTYTILVEGIAHQDELELSAEVLKEL 543
           +  +Y+ ++  +    ++  + E+  E+
Sbjct: 791 DCISYSTIIHELCKMGDINKAFELWNEM 818



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 143/277 (51%), Gaps = 1/277 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +  + +   + M  +G K D+V  T ++Y   K +  +K+  +   M   G+ PD  
Sbjct: 595 REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT +++ L K+ N+  A+   ++M   GY  NTVT+  L+  LC  G L  +      +
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   ++PN FTY+  L+    E  +  A K L   + +G   ++VS+N+L+ GLCK G+ 
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKI 773

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI   R +   GF P+ +SY+ ++  LC  G   +A EL  EM      P +V YNI 
Sbjct: 774 QEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIF 833

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           I     HG++D AL +   M++   +P+  +Y  +++
Sbjct: 834 IRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 115/215 (53%), Gaps = 1/215 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  +  A    ++MV  G+ P+ V  T L+ +LCK+  +  A  + + M++  ++
Sbjct: 661 DALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y   ++    +G++  A  L   M   G+  + V++N L++GLC  G + +++  
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDL 779

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + ++ + G  P+  +YS ++    K   ++ A +L ++++ KG KP++V+YN+ +     
Sbjct: 780 MRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            G +++A+  + ++   G +PN  +Y  LL  + +
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 216/424 (50%), Gaps = 1/424 (0%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           ++ +G  PD  + T  +   C KG +  A+   +K+   G+  + V+Y +L+ GLC +G 
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
              +L+ L R   K + P+   Y+ +++   K++ V+ A  L  + ++K   P++ +YN 
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNA 373

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L++G C  G+ ++AI  F  + SK   P+V +++IL+   C +G  +EA  +LA M    
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS 433

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +VTY+ L+       + + A  + + M       +  SYN +I   C    VD  +
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           K   +M H++  P+  TY+ L   LC  G++  A  ++  +  +        Y  ++ +L
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+K    +A  LL ++   G  PD  TY+ L++GLC  G +E+A ++F  +    Y  DV
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDV 613

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +  ++ G C     D +L +   M E G +P+  TY I++  +  +DE +++ ++L+E
Sbjct: 614 YAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLRE 673

Query: 543 LQLR 546
           + +R
Sbjct: 674 MIMR 677



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 218/442 (49%), Gaps = 4/442 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +++  G++PD +  T  +   C   ++ +A+   + +++ G   D  SY  L+N LCK G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
               A++L+ + +      + V YN+++ G+C   ++N +       + K + P+ FTY+
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+        +  A+ L + + +K   P++ ++++L+ G CK+G  +EA      +  +
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
             +P+VV+Y+ L+   C+     +A  +   M     +  + +YNI+I         D A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
           +K+  EM   +  P   +Y+ +I  LC  G++   ++ +D+M +R  +P+  TYN  L  
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC    V +A  ++  L  +        Y  ++  LC+ GK   A ++  ++   G+  D
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            Y Y+ +I+G C +GL +EAL +   MEE    PD   +  ++L L +    D++ ++ +
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLR 672

Query: 507 MMIEKG---QMPNETTYTILVE 525
            MI +G    + ++   +ILV 
Sbjct: 673 EMIMRGLLVALTDDLVASILVR 694



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 206/406 (50%), Gaps = 1/406 (0%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           GY  +T+T  + ++G C+ G ++Q+L F D++I  G   +  +Y  L+    K     AA
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           ++LL     K  +P++V YN ++ G+CK+    +A   + +  SK   P+V +YN L+  
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C+ G+ ++A +L  +M   +  P + T++IL+      G    A  VL  M+K   +P 
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             +Y+ ++   C   +V+      + M HR    N  +YN +    C +  V EA  + +
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            + +KQ       Y  +I  LC+ G+   A +L+ EM   G  PD  TY+S++  LC + 
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKH 557

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +++A+ +   ++    +PD++ +  L+ GLC+S + + + +VF+ ++ KG   +   YT
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 617

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGIE 567
           ++++G   +   + +  +L +++    + ++    +++   FE  E
Sbjct: 618 VMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 663



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/519 (23%), Positives = 229/519 (44%), Gaps = 49/519 (9%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H  NDA     R++ +   P  ++   +L  L K+      + + + M   GI  +  + 
Sbjct: 89  HNNNDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNC 148

Query: 137 TYLVNCLCKKGNVGYAMQLVEK----------------MEDYGYPTNTVT---------- 170
             L+N  C+ G + +A  ++ +                +ED+      V           
Sbjct: 149 NILINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFL 208

Query: 171 ---------------------YNSLVRGLCMLGNLNQSLQFLD-RLIQKGLVPNAFTYSF 208
                                + + ++  C+L +   S+++   ++++ G  P+  T + 
Sbjct: 209 KDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTT 268

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            ++    +  +H A+   D +IA G   + VSY  L+ GLCK G T+ A+   R    K 
Sbjct: 269 FIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKL 328

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P+VV YN ++  +C +    +A +L +E       P + TYN LI      GK   A+
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            + ++M      P   +++ ++   C +G +      L  M  +  KP+  TY+ L    
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C V +V +A +I  ++ ++  ++  + Y  +I   C+     +A +L  EM      PD 
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TYSSLI GLC  G I  ALE+   M     +PD+  +N++L  LCK    D ++ +   
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +  +G  P+  TYTILV+G+    +LE + +V ++L ++
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVK 607



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 218/445 (48%), Gaps = 25/445 (5%)

Query: 32  LHSFSL----NKGFIR---VLASTQVTISPKDSVYTKPN-RKPGNNNDTRHRDH------ 77
           LHSF +    +K FI+   +L S +++I      YT P   K G   DT           
Sbjct: 220 LHSFKILIEYHKTFIKQKCLLKSFEISIE-----YTPPKILKNGYEPDTITLTTFIKGFC 274

Query: 78  ---KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
              +++ A    +++++ G   D V    L+  LCK  + K A++++       + PD  
Sbjct: 275 LKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVV 334

Query: 135 SYTYLVNCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y  +++ +CK  +V  A  L  EK+    +P +  TYN+L+ G C++G L  ++   ++
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFP-DVFTYNALISGFCIVGKLKDAIDLFNK 393

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +  K ++P+ +T+S L++   K+  +  A  +L  ++ +  KP++V+Y+ L+ G C    
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +A   F  +  +G   NV SYNI++   C     +EA +L  EM      P ++TY+ 
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+  +AL+++DEM     +P   +YN I+  LC +  VD  +  L ++  + 
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            +P+  TY  L   LC  GK+++A  + + L  K  +     Y  +I   C KG   +A 
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGL 457
            LL +M + G  PD+ TY  +I  L
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSL 658



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 184/402 (45%), Gaps = 4/402 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L R   K  +PDVV    ++  +CK   +  A  +    VS  I PD  +Y  L++  C 
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A+ L  KM       +  T++ LV G C  GN+ ++   L  ++++ + P+  T
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS L++       V+ A  + + +  +G   N+ SYN+++ G CK    +EA++ F+++ 
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            K   P+V++Y+ L+  LC  GR   A EL+ EM    + P I+TYN ++ +L      D
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+ +L ++     RP   +Y  ++  LC  GK++   K  + +  +    +   Y  + 
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF- 443
              C  G   EA A++  +         + Y+ +I SL  K +   A +LL EM   G  
Sbjct: 621 QGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680

Query: 444 --TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
               D    S L+R      L      I +++   + KP  D
Sbjct: 681 VALTDDLVASILVRRTWCARLALWVTFISLLLRVIELKPGFD 722



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 148/261 (56%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  + +A   L  M+ +  KPDVV  ++L+   C  N++ KA  +   M   G+  +  
Sbjct: 415 KDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQ 474

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  ++N  CK   V  AM+L ++M       + +TY+SL+ GLC  G ++ +L+ +D +
Sbjct: 475 SYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEM 534

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G  P+  TY+ +L+A  K+  V  A+ LL  +  +G +P++ +Y +L+ GLC+ G+ 
Sbjct: 535 HYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKL 594

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A + F DL  KG+  +V +Y ++++  C +G ++EA  LL++M+     P   TY I+
Sbjct: 595 EDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEII 654

Query: 315 IGSLAYHGKTDHALKVLDEMV 335
           I SL    + D A K+L EM+
Sbjct: 655 ILSLFEKDENDMAEKLLREMI 675



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 150/295 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL DA     +M SK   PDV   + L+   CK   +K+A  V+ MM+   I PD  +Y+
Sbjct: 383 KLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYS 442

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C    V  A  +   M   G   N  +YN ++ G C +  ++++++    +  K
Sbjct: 443 SLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHK 502

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+  TYS L++   K   +  A++L+D++  +G +P++++YN +L  LCK+   ++A
Sbjct: 503 QIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKA 562

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I     L  +G  P++ +Y IL++ LC  G+ E+A ++  ++     +  +  Y ++I  
Sbjct: 563 ITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQG 622

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
               G  D AL +L +M +    P A +Y  II  L  + + D+  K L +M  R
Sbjct: 623 FCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 677



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A    + M  K   PDV+  ++L+  LCK+ ++  A+++++ M   G  PD  +Y  
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++ LCKK +V  A+ L+ K++  G   +  TY  LV+GLC  G L  + +  + L+ KG
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              + + Y+ +++    +     A+ LL  +   G  P+  +Y +++  L ++   + A 
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668

Query: 259 RFFRDLPSKG----FEPNVVSYNILLRSLC 284
           +  R++  +G       ++V+  ++ R+ C
Sbjct: 669 KLLREMIMRGLLVALTDDLVASILVRRTWC 698



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 66/130 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + H ++ A   L ++  +G +PD+   T L+  LC++ K++ A KV E ++  G  
Sbjct: 551 DALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +YT ++   C KG    A+ L+ KME+ G   +  TY  ++  L      + + + 
Sbjct: 611 LDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKL 670

Query: 191 LDRLIQKGLV 200
           L  +I +GL+
Sbjct: 671 LREMIMRGLL 680


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 230/464 (49%), Gaps = 2/464 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + MV+ G   ++  AT+L+   C    ++ A+ ++  +  SG++P+  +Y+ L++  CK 
Sbjct: 252 DDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKN 311

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           GN+  A +   +M+  G  ++  + NS++ G     +   +    +  ++ GL  N FT+
Sbjct: 312 GNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTF 370

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + LL    KE  ++ A  L D++IAKG  PN+VSYN ++ G C++     A + ++++  
Sbjct: 371 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 430

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            GF PN V++ IL+     +G  E A  +   M   +  PT  T  I+I  L   G++  
Sbjct: 431 NGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFE 490

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
              + ++ V   F P+   YN II     EG ++L      +M      P+  TY  L  
Sbjct: 491 GRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLID 550

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C    +  A  ++  +  K      + Y  +I   C++     A +LL E+   G +P
Sbjct: 551 GFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSP 610

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           + + Y+S+I G      +EEA++++  M       D+  + +L+ GL KS R   + ++ 
Sbjct: 611 NRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIH 670

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             M+ KG +P++  +T+L+ G+ ++ + E + ++L+++  + ++
Sbjct: 671 TEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMI 714



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 201/423 (47%), Gaps = 8/423 (1%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           + G+  D  +Y+  V+ LC K N GYA+ L+ +M   G+     T+ S++      GN+ 
Sbjct: 186 ARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVA 245

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           ++L+  D ++  G   N    + L++    +  + +A+ L+++I   G  PN V+Y+VL+
Sbjct: 246 EALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLI 305

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-MDGGDR 304
            G CK G  E+A  F+ ++ +KG   +V S N +L        W+ A  +  + ++ G  
Sbjct: 306 DGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG-- 363

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
              + T+N L+  L   GK + A  + DE++     P+  SYN II   C +  ++   K
Sbjct: 364 LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK 423

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
              +M      PN  T+    ++ G    G ++ AF+I   + +            +I  
Sbjct: 424 VYKEMLDNGFTPNAVTFT--ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKG 481

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC+ G++++   L  +    GF P    Y+++I G   EG I  A  ++  M E    P 
Sbjct: 482 LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPS 541

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              + +L+ G CK    DL+L++   M  KG   +   Y  L++G   + +++ + E+L 
Sbjct: 542 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 601

Query: 542 ELQ 544
           EL+
Sbjct: 602 ELR 604



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 207/455 (45%), Gaps = 6/455 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +  AF     M +KG +  V    ++L    K    + A  +    + SG+  +  
Sbjct: 310 KNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVF 368

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ LCK+G +  A  L +++   G   N V+YN+++ G C   N+N + +    +
Sbjct: 369 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 428

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  PNA T++ L++  +K+  +  A  +   +      P   +  +++ GLCK GR+
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            E    F    S+GF P  + YN ++     EG    A+ +  EM     +P+ VTY  L
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 548

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I         D ALK+L++M +   +    +Y  +I   C    +    + L+++     
Sbjct: 549 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGL 608

Query: 375 KPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            PN   YN  +M+ G   +  V+EA  + + + N+      + Y  +I  L + G+   A
Sbjct: 609 SPNRFIYN--SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYA 666

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             +  EM   G  PD   ++ LI GLC +G  E A +I   M   +  P V  +N L+ G
Sbjct: 667 SDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 726

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             K      +  +   M+++G +P+  TY ILV G
Sbjct: 727 HFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 86/158 (54%), Gaps = 1/158 (0%)

Query: 62  PNRKPGNNNDTRHRD-HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PNR   N+  T  ++ + + +A    ++MV++G   D+   T+L+  L K+ ++  A  +
Sbjct: 610 PNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDI 669

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
              M+S GI+PD  ++T L+N LC KG    A +++E M       + + YN+L+ G   
Sbjct: 670 HTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFK 729

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
            GNL ++ +  D ++ +GLVP+  TY  L+   +K  G
Sbjct: 730 EGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDG 767



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           + RD K   A   L  +   G  P+     +++      N +++AI + + MV+ GI  D
Sbjct: 589 KRRDMK--SAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCD 646

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +YT L++ L K G + YA  +  +M   G   +   +  L+ GLC  G    + + L+
Sbjct: 647 LKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 706

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
            +  K ++P+   Y+ L+   +KE  +  A +L D+++ +G  P+ ++Y++L+ G
Sbjct: 707 DMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 65/139 (46%)

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           QE Y   +  LC K  +  A  LL EM   G+ P   T++S+I     EG + EAL +  
Sbjct: 193 QEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKD 252

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M       ++    +L+ G C       +L +   + E G +PN+ TY++L++G     
Sbjct: 253 DMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNG 312

Query: 532 ELELSAEVLKELQLRQVVS 550
            +E + E   E++ + + S
Sbjct: 313 NIEKAFEFYSEMKTKGIRS 331


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 235/473 (49%), Gaps = 4/473 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +++ A      M+ +G  P ++   +++ +LCK  +M KA  +++ MV SGI PD  
Sbjct: 222 KDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLF 281

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++ LCK   +  A +++E+M + G   N++TYNSL+ G  + G  N+S++   ++
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G++P     +  + A +K    + A  + D ++ KG KP+++SY+ +L G      +
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 401

Query: 255 --EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              +    F  + +KG  PN   +NIL+ +    G  ++A  +  +M      P  VT+ 
Sbjct: 402 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 461

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +I SL   G+ D AL   + MV     PS A Y  +I   C+ G++    + + +M ++
Sbjct: 462 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 521

Query: 373 RCKPNEGTY--NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              P    Y  + +  LC  G+V E   I+  +           +  ++   C  G   +
Sbjct: 522 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 581

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF LL  M   G  P+ Y Y +L+ G C  G I++AL +F  M     KP    ++ +L 
Sbjct: 582 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 641

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           GL ++RRT  + ++F  MIE G   +  TY +++ G+   +  + +  +L++L
Sbjct: 642 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 694



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 233/502 (46%), Gaps = 43/502 (8%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLC--KANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           F +++R     H P  +   N+L D C  + ++    + ++  ++ +G+ PD  SY+ L+
Sbjct: 160 FKRMDRWACPRHSPPTIHTYNILID-CYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LI 217

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
               K G V  A  L  +M + G     +  NS+++ LC +  ++++   + +++  G+ 
Sbjct: 218 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 277

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ FTYS +++   K + +  A ++L+ ++  G +PN ++YN L+ G    G   E++R 
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY--------- 311
           F+ + S G  P V + N  + +L   GR  EA  +   M      P I++Y         
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 397

Query: 312 ----------------------------NILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
                                       NILI + A  G  D A+ + ++M      P  
Sbjct: 398 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 457

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
            ++  +I+ LC  G++D  +   + M      P+E  Y  L    C  G++ +A  +I  
Sbjct: 458 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 517

Query: 403 LGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           + NK    P  +++  +I +LC++G+  +   ++  M + G  P+  T++SL+ G C+ G
Sbjct: 518 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 577

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +EEA  +   M     +P+   +  L+ G CK+ R D +L VF+ M+ KG  P    Y+
Sbjct: 578 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 637

Query: 522 ILVEGIAHQDELELSAEVLKEL 543
           I++ G+        + ++  E+
Sbjct: 638 IILHGLFQARRTTAAKKMFHEM 659



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/520 (20%), Positives = 224/520 (43%), Gaps = 40/520 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE+MV  G +P+ +   +L++    +    ++++V + M S G+IP   +    ++ L K
Sbjct: 303 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 362

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN--LNQSLQFLDRLIQKGLVPNA 203
            G    A  + + M   G   + ++Y++++ G     +  L       + ++ KG+ PN 
Sbjct: 363 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 422

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
             ++ L+ A  +   +  AM + +D+  KG  P+ V++  +++ LC+ GR ++A+  F  
Sbjct: 423 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 482

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY-NILIGSLAYHG 322
           +   G  P+   Y  L++  C  G   +A EL++EM   D  P  V Y + +I +L   G
Sbjct: 483 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 542

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           +      ++D MV+   RP+  ++N ++   C  G ++     LD M     +PN   Y 
Sbjct: 543 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 602

Query: 383 GLA-MLCGVGKVQEAFAIIQSL---------------------GNKQNSSPQEF------ 414
            L    C  G++ +A  + + +                       +  ++ + F      
Sbjct: 603 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 662

Query: 415 --------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  V+  LCR   T +A  LL ++       D  T++ +I  +   G  +EA
Sbjct: 663 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 722

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            E+F  +  Y   P++  ++ ++  L K    + +  +F  + + G   +      +V  
Sbjct: 723 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 782

Query: 527 IAHQDELELSAEVLKELQLRQVVSE-SAVERLVMQYDFEG 565
           + ++ E+  ++  L  +    +  E S +  L   +  EG
Sbjct: 783 LLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 822



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+DA  +   MV  G  P       L+   C   ++ KA +++  M++  I P   
Sbjct: 469 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 528

Query: 135 SY-TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y + ++N LCK+G V     +++ M   G   N VT+NSL+ G C++GN+ ++   LD 
Sbjct: 529 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 588

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G+ PN + Y  L++   K   +  A+ +  D++ KG KP  V Y+++L GL +  R
Sbjct: 589 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 648

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A + F ++   G   ++ +Y ++L  LC     +EAN LL ++   +    I+T+NI
Sbjct: 649 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 708

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           +I ++   G+   A ++ D +      P+  +Y+ +I  L  E
Sbjct: 709 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 751



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 7/261 (2%)

Query: 36  SLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHK 95
           ++ + F  + A   + I P   +Y       G   D   ++ +++DA      M+ KG K
Sbjct: 578 NMEEAFALLDAMASIGIEPNCYIY-------GTLVDGYCKNGRIDDALTVFRDMLHKGVK 630

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P  V  + +L+ L +A +   A K+   M+ SG      +Y  ++  LC+      A  L
Sbjct: 631 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 690

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +EK+       + +T+N ++  +  +G   ++ +  D +   GLVPN  TYS ++    K
Sbjct: 691 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 750

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           E     A  L   +   G   +    N ++  L  +    +A  +   +          +
Sbjct: 751 EESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEAST 810

Query: 276 YNILLRSLCMEGRWEEANELL 296
            ++L      EG++ E  +LL
Sbjct: 811 ISLLASLFSREGKYREHIKLL 831


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 235/473 (49%), Gaps = 4/473 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +++ A      M+ +G  P ++   +++ +LCK  +M KA  +++ MV SGI PD  
Sbjct: 60  KDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLF 119

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++ LCK   +  A +++E+M + G   N++TYNSL+ G  + G  N+S++   ++
Sbjct: 120 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 179

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G++P     +  + A +K    + A  + D ++ KG KP+++SY+ +L G      +
Sbjct: 180 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 239

Query: 255 --EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              +    F  + +KG  PN   +NIL+ +    G  ++A  +  +M      P  VT+ 
Sbjct: 240 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 299

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +I SL   G+ D AL   + MV     PS A Y  +I   C+ G++    + + +M ++
Sbjct: 300 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 359

Query: 373 RCKPNEGTY--NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              P    Y  + +  LC  G+V E   I+  +           +  ++   C  G   +
Sbjct: 360 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 419

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF LL  M   G  P+ Y Y +L+ G C  G I++AL +F  M     KP    ++ +L 
Sbjct: 420 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 479

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           GL ++RRT  + ++F  MIE G   +  TY +++ G+   +  + +  +L++L
Sbjct: 480 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 532



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 231/499 (46%), Gaps = 43/499 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLC--KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           ++R     H P  +   N+L D C  + ++    + ++  ++ +G+ PD  SY+ L+   
Sbjct: 1   MDRWACPRHSPPTIHTYNILID-CYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGF 58

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
            K G V  A  L  +M + G     +  NS+++ LC +  ++++   + +++  G+ P+ 
Sbjct: 59  VKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDL 118

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           FTYS +++   K + +  A ++L+ ++  G +PN ++YN L+ G    G   E++R F+ 
Sbjct: 119 FTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQ 178

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY------------ 311
           + S G  P V + N  + +L   GR  EA  +   M      P I++Y            
Sbjct: 179 MSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATD 238

Query: 312 -------------------------NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
                                    NILI + A  G  D A+ + ++M      P   ++
Sbjct: 239 SCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 298

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN 405
             +I+ LC  G++D  +   + M      P+E  Y  L    C  G++ +A  +I  + N
Sbjct: 299 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN 358

Query: 406 KQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           K    P  +++  +I +LC++G+  +   ++  M + G  P+  T++SL+ G C+ G +E
Sbjct: 359 KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNME 418

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA  +   M     +P+   +  L+ G CK+ R D +L VF+ M+ KG  P    Y+I++
Sbjct: 419 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 478

Query: 525 EGIAHQDELELSAEVLKEL 543
            G+        + ++  E+
Sbjct: 479 HGLFQARRTTAAKKMFHEM 497



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 192/416 (46%), Gaps = 4/416 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK--MKKAIKVMEMMVSSGIIPDASS 135
           + N+A    + MV KG KPD++  + +L+    A    +     +  +M++ GI P+   
Sbjct: 203 RTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHV 262

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L+N   + G +  AM + E M++ G   +TVT+ +++  LC +G L+ +L   + ++
Sbjct: 263 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 322

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY-NVLLTGLCKEGRT 254
             G+ P+   Y  L++       +  A +L+ +++ K   P  V Y + ++  LCKEGR 
Sbjct: 323 DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRV 382

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            E       +   G  PNVV++N L+   C+ G  EEA  LL  M      P    Y  L
Sbjct: 383 AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 442

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +     +G+ D AL V  +M+    +P++  Y+ I+  L    +     K   +M     
Sbjct: 443 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 502

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  TY   L  LC      EA  +++ L           +  VI+++ + G+  +A +
Sbjct: 503 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 562

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           L   ++ YG  P+  TYS +I  L  E   EEA  +F+ +E+  +  D    N ++
Sbjct: 563 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 618



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 181/394 (45%), Gaps = 2/394 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A L  E M +KG  PD V    ++  LC+  ++  A+     MV  G+ P  + Y  
Sbjct: 276 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 335

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY-NSLVRGLCMLGNLNQSLQFLDRLIQK 197
           L+   C  G +  A +L+ +M +   P   V Y +S++  LC  G + +    +D ++Q 
Sbjct: 336 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 395

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  T++ L+E       +  A  LLD + + G +PN   Y  L+ G CK GR ++A
Sbjct: 396 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 455

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  FRD+  KG +P  V Y+I+L  L    R   A ++  EM     + +I TY +++G 
Sbjct: 456 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 515

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +  TD A  +L+++     +    ++N +I+ +   G+     +  D +      PN
Sbjct: 516 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 575

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ +   L      +EA  +  S+    ++S      +++  L  K +  +A   L 
Sbjct: 576 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 635

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
            + +   T ++ T S L      EG   E +++ 
Sbjct: 636 IIGENNLTLEASTISLLASLFSREGKYREHIKLL 669



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 4/273 (1%)

Query: 28  QIPNLHSF-SLNKGFIRV--LASTQVTISPKDSVYTKPNRKP-GNNNDTRHRDHKLNDAF 83
           Q PN+ +F SL +G+  V  +      +    S+  +PN    G   D   ++ +++DA 
Sbjct: 397 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 456

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
                M+ KG KP  V  + +L+ L +A +   A K+   M+ SG      +Y  ++  L
Sbjct: 457 TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL 516

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           C+      A  L+EK+       + +T+N ++  +  +G   ++ +  D +   GLVPN 
Sbjct: 517 CRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNI 576

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TYS ++    KE     A  L   +   G   +    N ++  L  +    +A  +   
Sbjct: 577 QTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSI 636

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +          + ++L      EG++ E  +LL
Sbjct: 637 IGENNLTLEASTISLLASLFSREGKYREHIKLL 669


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 195/393 (49%), Gaps = 2/393 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV  G+         L+  LCK     +A K++  M        A +Y+ ++N LCK   
Sbjct: 36  MVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNR 95

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A +L+EKM  Y  P + +TY  +V  LC    ++ +L  ++ +  +G+ P+AF Y+F
Sbjct: 96  VEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF 154

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L    +E  V  A  L + ++ +   PN+V+YN L+ GLCK  R E A   F+++  KG
Sbjct: 155 VLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
           + P  VSYN L+   C +     A ++  +M   +  P +VTY  LI  L+  GK   A 
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAA 274

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           +VLD MVK    P+ A+Y+ +I   C   +VD   K L+QM  +   P   TYN L   L
Sbjct: 275 EVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 334

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   K+++AF + + +  ++       Y  ++ +LC   +   A +L  EM   G  PD+
Sbjct: 335 CRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDA 394

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            TY +L  GL   G + EA E+   M+     P
Sbjct: 395 ITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 200/400 (50%), Gaps = 2/400 (0%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           KA ++++  +V + MV +G    AS Y  L++CLCK GN   A +L+  M    +    +
Sbjct: 22  KAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAI 81

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            Y++++  LC L  + ++ + ++++ +    P+A TY  ++E   K + +  A+  ++++
Sbjct: 82  AYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEM 140

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
             +G KP+   YN +L+GLC+E + EEA   F  +  +   PNVV+YN L+  LC   R 
Sbjct: 141 ATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRI 200

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           E A EL  EM G    PT V+YN LI           A  V D+MV+    P+  +Y  +
Sbjct: 201 ETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTL 260

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQN 408
           I  L   GKV    + LD M  +   PN  TY+ L    C V +V EA  +++ +  +  
Sbjct: 261 IDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 320

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +     Y  ++ SLCR  K   AF+L   M +    P   TY++L+R LC    ++ A  
Sbjct: 321 APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHR 380

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           ++  M      PD   ++ L  GL ++ +   + E+ + M
Sbjct: 381 LYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 202/423 (47%), Gaps = 2/423 (0%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M    +IP A+++  + +   K G +    ++ + M + GY      Y  L+  LC +GN
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            +++ + L  +  K     A  YS ++    K   V  A +L++ + A+   P+ ++Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++  LCK  R ++A+    ++ ++G +P+   YN +L  LC E + EEA  L  +M    
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
            +P +VTYN LI  L    + + A ++  EM    + P+  SYN +I   C +  +    
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
              D+M    C PN  TY  L   L   GKVQ A  ++  +  K  +     Y  +I   
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+  +  +A +LL +M   G  P   TY+ L+  LC    +E+A ++F  M +    P V
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N LL  LC  ++ D +  ++  MI KG  P+  TY  L  G+    ++  + E++++
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 543 LQL 545
           ++L
Sbjct: 420 MKL 422



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 162/295 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  +++DA   +E M ++G KPD      +L  LC+  K+++A  + E MV   I P+  
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK   +  A +L ++M   GY    V+YN+L+ G C   +L  +    D++
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++   VPN  TY+ L++   K   V AA ++LD ++ KG  PN+ +Y+ L+ G CK  R 
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA +    + ++G  P VV+YNILL SLC   + E+A +L   M      PT+VTYN L
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           + +L +H + D A ++  EM+     P A +Y+ +   L   GKV    + +++M
Sbjct: 366 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 174/328 (53%), Gaps = 2/328 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++ +A   +E+M ++   PD +    ++  LCK  ++  A+  +E M + GI PDA  Y
Sbjct: 94  NRVEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIY 152

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            ++++ LC++  V  A  L EKM       N VTYN+L+ GLC    +  + +    +  
Sbjct: 153 NFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAG 212

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG VP   +Y+ L++   K++ + AA  + D ++     PN+V+Y  L+ GL K G+ + 
Sbjct: 213 KGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQA 272

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      +  KG  PNV +Y+ L+   C   R +EA++LL +M     +PT+VTYNIL+ 
Sbjct: 273 AAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLN 332

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           SL    K + A K+   M + R  P+  +YN ++  LC   ++D   +   +M  + C P
Sbjct: 333 SLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPP 392

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSL 403
           +  TY+ LA  L   GKV EA  +++ +
Sbjct: 393 DAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 170/350 (48%), Gaps = 2/350 (0%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++P A T++ + +   K   +    ++   ++  G       Y +L++ LCK G  +EA 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +    +  K F+   ++Y+ ++  LC   R EEA EL+ +M      P  +TY  ++  L
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERL 124

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + D AL  ++EM     +P A  YN +++ LC E KV+      ++M  +R  PN 
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L   LC   +++ A+ + + +  K     +  Y  +I   C+K     A  +  +
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M +    P+  TY++LI GL   G ++ A E+   M +    P+V  ++ L+ G CK RR
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 304

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
            D + ++ + M+ +G  P   TY IL+  +   D+LE + ++ + +  R+
Sbjct: 305 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 79/159 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+  A   L+ MV KG  P+V   + L+   CK  ++ +A K++E MV+ GI 
Sbjct: 262 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 321

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +Y  L+N LC+   +  A +L   M         VTYN+L+R LC    L+ + + 
Sbjct: 322 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
              +I KG  P+A TY  L     +   VH A +L++ +
Sbjct: 382 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 235/473 (49%), Gaps = 4/473 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +++ A      M+ +G  P ++   +++ +LCK  +M KA  +++ MV SGI PD  
Sbjct: 202 KDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLF 261

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++ LCK   +  A +++E+M + G   N++TYNSL+ G  + G  N+S++   ++
Sbjct: 262 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 321

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G++P     +  + A +K    + A  + D ++ KG KP+++SY+ +L G      +
Sbjct: 322 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 381

Query: 255 --EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              +    F  + +KG  PN   +NIL+ +    G  ++A  +  +M      P  VT+ 
Sbjct: 382 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 441

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +I SL   G+ D AL   + MV     PS A Y  +I   C+ G++    + + +M ++
Sbjct: 442 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 501

Query: 373 RCKPNEGTY--NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              P    Y  + +  LC  G+V E   I+  +           +  ++   C  G   +
Sbjct: 502 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 561

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF LL  M   G  P+ Y Y +L+ G C  G I++AL +F  M     KP    ++ +L 
Sbjct: 562 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 621

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           GL ++RRT  + ++F  MIE G   +  TY +++ G+   +  + +  +L++L
Sbjct: 622 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 674



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 233/502 (46%), Gaps = 43/502 (8%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLC--KANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           F +++R     H P  +   N+L D C  + ++    + ++  ++ +G+ PD  SY+ L+
Sbjct: 140 FKRMDRWACPRHSPPTIHTYNILID-CYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LI 197

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
               K G V  A  L  +M + G     +  NS+++ LC +  ++++   + +++  G+ 
Sbjct: 198 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 257

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ FTYS +++   K + +  A ++L+ ++  G +PN ++YN L+ G    G   E++R 
Sbjct: 258 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 317

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY--------- 311
           F+ + S G  P V + N  + +L   GR  EA  +   M      P I++Y         
Sbjct: 318 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 377

Query: 312 ----------------------------NILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
                                       NILI + A  G  D A+ + ++M      P  
Sbjct: 378 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 437

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
            ++  +I+ LC  G++D  +   + M      P+E  Y  L    C  G++ +A  +I  
Sbjct: 438 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 497

Query: 403 LGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           + NK    P  +++  +I +LC++G+  +   ++  M + G  P+  T++SL+ G C+ G
Sbjct: 498 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 557

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +EEA  +   M     +P+   +  L+ G CK+ R D +L VF+ M+ KG  P    Y+
Sbjct: 558 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 617

Query: 522 ILVEGIAHQDELELSAEVLKEL 543
           I++ G+        + ++  E+
Sbjct: 618 IILHGLFQARRTTAAKKMFHEM 639



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 180/388 (46%), Gaps = 2/388 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A L  E M +KG  PD V    ++  LC+  ++  A+     MV  G+ P  + Y  
Sbjct: 418 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 477

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY-NSLVRGLCMLGNLNQSLQFLDRLIQK 197
           L+   C  G +  A +L+ +M +   P   V Y +S++  LC  G + +    +D ++Q 
Sbjct: 478 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 537

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  T++ L+E       +  A  LLD + + G +PN   Y  L+ G CK GR ++A
Sbjct: 538 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 597

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  FRD+  KG +P  V Y+I+L  L    R   A ++  EM     + +I TY +++G 
Sbjct: 598 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 657

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +  TD A  +L+++     +    ++N +I+ +   G+     +  D +      PN
Sbjct: 658 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 717

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ +   L      +EA  +  S+    ++S      +++  L  K +  +A   L 
Sbjct: 718 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 777

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            + +   T ++ T S L      EG+I+
Sbjct: 778 IIGENNLTLEASTISLLASLFSREGMIK 805



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/521 (20%), Positives = 225/521 (43%), Gaps = 40/521 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE+MV  G +P+ +   +L++    +    ++++V + M S G+IP   +    ++ L K
Sbjct: 283 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 342

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN--LNQSLQFLDRLIQKGLVPNA 203
            G    A  + + M   G   + ++Y++++ G     +  L       + ++ KG+ PN 
Sbjct: 343 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 402

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
             ++ L+ A  +   +  AM + +D+  KG  P+ V++  +++ LC+ GR ++A+  F  
Sbjct: 403 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 462

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY-NILIGSLAYHG 322
           +   G  P+   Y  L++  C  G   +A EL++EM   D  P  V Y + +I +L   G
Sbjct: 463 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 522

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           +      ++D MV+   RP+  ++N ++   C  G ++     LD M     +PN   Y 
Sbjct: 523 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 582

Query: 383 GLA-MLCGVGKVQEAFAIIQSL---------------------GNKQNSSPQEF------ 414
            L    C  G++ +A  + + +                       +  ++ + F      
Sbjct: 583 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 642

Query: 415 --------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  V+  LCR   T +A  LL ++       D  T++ +I  +   G  +EA
Sbjct: 643 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 702

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            E+F  +  Y   P++  ++ ++  L K    + +  +F  + + G   +      +V  
Sbjct: 703 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 762

Query: 527 IAHQDELELSAEVLKELQLRQVVSE-SAVERLVMQYDFEGI 566
           + ++ E+  ++  L  +    +  E S +  L   +  EG+
Sbjct: 763 LLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGM 803



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+DA  +   MV  G  P       L+   C   ++ KA +++  M++  I P   
Sbjct: 449 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 508

Query: 135 SY-TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y + ++N LCK+G V     +++ M   G   N VT+NSL+ G C++GN+ ++   LD 
Sbjct: 509 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 568

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G+ PN + Y  L++   K   +  A+ +  D++ KG KP  V Y+++L GL +  R
Sbjct: 569 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 628

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A + F ++   G   ++ +Y ++L  LC     +EAN LL ++   +    I+T+NI
Sbjct: 629 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 688

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           +I ++   G+   A ++ D +      P+  +Y+ +I  L  E
Sbjct: 689 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 731



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 7/198 (3%)

Query: 36  SLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHK 95
           ++ + F  + A   + I P   +Y       G   D   ++ +++DA      M+ KG K
Sbjct: 558 NMEEAFALLDAMASIGIEPNCYIY-------GTLVDGYCKNGRIDDALTVFRDMLHKGVK 610

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P  V  + +L+ L +A +   A K+   M+ SG      +Y  ++  LC+      A  L
Sbjct: 611 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 670

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +EK+       + +T+N ++  +  +G   ++ +  D +   GLVPN  TYS ++    K
Sbjct: 671 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 730

Query: 216 ERGVHAAMKLLDDIIAKG 233
           E     A  L   +   G
Sbjct: 731 EESYEEADNLFISVEKSG 748


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 235/473 (49%), Gaps = 4/473 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +++ A      M+ +G  P ++   +++ +LCK  +M KA  +++ MV SGI PD  
Sbjct: 146 KDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLF 205

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++ LCK   +  A +++E+M + G   N++TYNSL+ G  + G  N+S++   ++
Sbjct: 206 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 265

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G++P     +  + A +K    + A  + D ++ KG KP+++SY+ +L G      +
Sbjct: 266 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 325

Query: 255 --EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              +    F  + +KG  PN   +NIL+ +    G  ++A  +  +M      P  VT+ 
Sbjct: 326 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 385

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +I SL   G+ D AL   + MV     PS A Y  +I   C+ G++    + + +M ++
Sbjct: 386 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 445

Query: 373 RCKPNEGTY--NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              P    Y  + +  LC  G+V E   I+  +           +  ++   C  G   +
Sbjct: 446 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 505

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF LL  M   G  P+ Y Y +L+ G C  G I++AL +F  M     KP    ++ +L 
Sbjct: 506 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 565

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           GL ++RRT  + ++F  MIE G   +  TY +++ G+   +  + +  +L++L
Sbjct: 566 GLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 618



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 232/500 (46%), Gaps = 43/500 (8%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLC--KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           +++R     H P  +   N+L D C  + ++    + ++  ++ +G+ PD  SY+ L+  
Sbjct: 86  RMDRWACPRHSPPTIHTYNILID-CYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYG 143

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K G V  A  L  +M + G     +  NS+++ LC +  ++++   + +++  G+ P+
Sbjct: 144 FVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPD 203

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            FTYS +++   K + +  A ++L+ ++  G +PN ++YN L+ G    G   E++R F+
Sbjct: 204 LFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 263

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY----------- 311
            + S G  P V + N  + +L   GR  EA  +   M      P I++Y           
Sbjct: 264 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 323

Query: 312 --------------------------NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
                                     NILI + A  G  D A+ + ++M      P   +
Sbjct: 324 DSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 383

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
           +  +I+ LC  G++D  +   + M      P+E  Y  L    C  G++ +A  +I  + 
Sbjct: 384 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 443

Query: 405 NKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
           NK    P  +++  +I +LC++G+  +   ++  M + G  P+  T++SL+ G C+ G +
Sbjct: 444 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 503

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           EEA  +   M     +P+   +  L+ G CK+ R D +L VF+ M+ KG  P    Y+I+
Sbjct: 504 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 563

Query: 524 VEGIAHQDELELSAEVLKEL 543
           + G+        + ++  E+
Sbjct: 564 LHGLFQARRTTAAKKMFHEM 583



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 180/388 (46%), Gaps = 2/388 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A L  E M +KG  PD V    ++  LC+  ++  A+     MV  G+ P  + Y  
Sbjct: 362 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 421

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY-NSLVRGLCMLGNLNQSLQFLDRLIQK 197
           L+   C  G +  A +L+ +M +   P   V Y +S++  LC  G + +    +D ++Q 
Sbjct: 422 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 481

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  T++ L+E       +  A  LLD + + G +PN   Y  L+ G CK GR ++A
Sbjct: 482 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 541

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  FRD+  KG +P  V Y+I+L  L    R   A ++  EM     + +I TY +++G 
Sbjct: 542 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 601

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +  TD A  +L+++     +    ++N +I+ +   G+     +  D +      PN
Sbjct: 602 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 661

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY+ +   L      +EA  +  S+    ++S      +++  L  K +  +A   L 
Sbjct: 662 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 721

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            + +   T ++ T S L      EG+I+
Sbjct: 722 IIGENNLTLEASTISLLASLFSREGMIK 749



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/521 (20%), Positives = 225/521 (43%), Gaps = 40/521 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE+MV  G +P+ +   +L++    +    ++++V + M S G+IP   +    ++ L K
Sbjct: 227 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 286

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN--LNQSLQFLDRLIQKGLVPNA 203
            G    A  + + M   G   + ++Y++++ G     +  L       + ++ KG+ PN 
Sbjct: 287 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 346

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
             ++ L+ A  +   +  AM + +D+  KG  P+ V++  +++ LC+ GR ++A+  F  
Sbjct: 347 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 406

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY-NILIGSLAYHG 322
           +   G  P+   Y  L++  C  G   +A EL++EM   D  P  V Y + +I +L   G
Sbjct: 407 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 466

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           +      ++D MV+   RP+  ++N ++   C  G ++     LD M     +PN   Y 
Sbjct: 467 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 526

Query: 383 GLA-MLCGVGKVQEAFAIIQSL---------------------GNKQNSSPQEF------ 414
            L    C  G++ +A  + + +                       +  ++ + F      
Sbjct: 527 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 586

Query: 415 --------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  V+  LCR   T +A  LL ++       D  T++ +I  +   G  +EA
Sbjct: 587 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 646

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            E+F  +  Y   P++  ++ ++  L K    + +  +F  + + G   +      +V  
Sbjct: 647 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 706

Query: 527 IAHQDELELSAEVLKELQLRQVVSE-SAVERLVMQYDFEGI 566
           + ++ E+  ++  L  +    +  E S +  L   +  EG+
Sbjct: 707 LLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGM 747



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+DA  +   MV  G  P       L+   C   ++ KA +++  M++  I P   
Sbjct: 393 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 452

Query: 135 SY-TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y + ++N LCK+G V     +++ M   G   N VT+NSL+ G C++GN+ ++   LD 
Sbjct: 453 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 512

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G+ PN + Y  L++   K   +  A+ +  D++ KG KP  V Y+++L GL +  R
Sbjct: 513 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 572

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A + F ++   G   ++ +Y ++L  LC     +EAN LL ++   +    I+T+NI
Sbjct: 573 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 632

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           +I ++   G+   A ++ D +      P+  +Y+ +I  L  E
Sbjct: 633 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 675



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 7/198 (3%)

Query: 36  SLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHK 95
           ++ + F  + A   + I P   +Y       G   D   ++ +++DA      M+ KG K
Sbjct: 502 NMEEAFALLDAMASIGIEPNCYIY-------GTLVDGYCKNGRIDDALTVFRDMLHKGVK 554

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P  V  + +L+ L +A +   A K+   M+ SG      +Y  ++  LC+      A  L
Sbjct: 555 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 614

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +EK+       + +T+N ++  +  +G   ++ +  D +   GLVPN  TYS ++    K
Sbjct: 615 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 674

Query: 216 ERGVHAAMKLLDDIIAKG 233
           E     A  L   +   G
Sbjct: 675 EESYEEADNLFISVEKSG 692


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 212/434 (48%), Gaps = 5/434 (1%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDVV    L+    +A  +  AI +++ M + G+ P   ++  ++  LCK      A ++
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
              M+      +  ++N L+ G C +G + ++++F   + Q+G+ P+  ++S L+   + 
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GLFS 308

Query: 216 ERGV--HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            RG   HAA   L ++   G  P+ V Y +++ G C+ G   EA+R   ++   G  P+V
Sbjct: 309 TRGKMDHAA-AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDV 367

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V+YN LL  LC + R  +A ELL EM     +P + T+  LI      G  + AL++ D 
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDT 427

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           ++  R RP   +YN +I  +C +G +    +  D M  R   PN  TY+ L    C  G+
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQ 487

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           V+EAF  +  + +K N      Y  +I   CR G   +  Q L +M +    PD  T+++
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNT 547

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI G   E  +  A  +F +ME+   +PD   +N ++ G  +    + +  VF+ M   G
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASG 607

Query: 513 QMPNETTYTILVEG 526
             P+  TY  L+ G
Sbjct: 608 IEPDRYTYMSLING 621



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 216/441 (48%), Gaps = 1/441 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +++  CK+ +  KA  V+  M    + PD  ++  L++   + G+V  A+ LV+ M + G
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
                VT+NS+++GLC     +++ +    + Q  + P+  +++ L+    +   V  AM
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           K   ++  +G  P++VS++ L+      G+ + A  + R++   G  P+ V Y +++   
Sbjct: 283 KFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G   EA  +  EM G    P +VTYN L+  L    +   A ++L+EM +    P  
Sbjct: 343 CRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDL 402

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            ++  +I   C +G  +  ++  D + H+R +P+   YN L   +C  G + +A  +   
Sbjct: 403 CTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDD 462

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  ++       Y  +I S C KG+  +AF  L EM   G  P+  TY+S+I+G C  G 
Sbjct: 463 MHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGN 522

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++  +    M + +  PD+  FN L+ G  K      +  VF +M ++   P+  TY +
Sbjct: 523 VKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNM 582

Query: 523 LVEGIAHQDELELSAEVLKEL 543
           ++ G + Q  +E +  V K++
Sbjct: 583 IINGFSEQGNMEEAGRVFKKM 603



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 45/455 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D R R   ++ A   ++ M +KG KP +V   ++L  LCK  +  KA +V   M    + 
Sbjct: 200 DARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVA 259

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR-------------- 176
           PD  S+  L+   C+ G V  AM+  ++M+  G   + V+++ L+               
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319

Query: 177 ---------------------GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
                                G C  G+++++L+  D ++  G +P+  TY+ LL    K
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +  +  A +LL+++  +G  P+L ++  L+ G C++G  E+A++ F  L  +   P+VV+
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN L+  +C +G   +ANEL  +M   +  P  VTY+ILI S    G+ + A   LDEMV
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMV 499

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
                P+  +YN II   C  G V    + L +M      P+  T+N L      G ++E
Sbjct: 500 SKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIH----GYIKE 555

Query: 396 -----AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
                AF +   +  +        Y  +I     +G   +A ++  +M   G  PD YTY
Sbjct: 556 ENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTY 615

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            SLI G    G  +EA ++   M    + PD D F
Sbjct: 616 MSLINGHVTAGNSKEAFQLHDEMMHRGFAPD-DKF 649



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 181/378 (47%), Gaps = 34/378 (8%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            N  T N +V   C     +++   +  + ++ + P+  T++ L++A ++   V AA+ L
Sbjct: 155 VNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           +D +  KG KP +V++N +L GLCK  R ++A   FR +      P+V S+NIL+   C 
Sbjct: 215 VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCR 274

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            G  EEA +   EM     +P +V+++ LIG  +  GK DHA   L EM      P    
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN 405
           Y  +I   C  G +   ++  D+M    C P+  TYN L                     
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL--------------------- 373

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                        +  LC++ +   A +LL EM + G TPD  T+++LI G C +G  E+
Sbjct: 374 -------------LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEK 420

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           AL++F  +     +PDV  +N+L+ G+C+      + E++  M  +   PN  TY+IL++
Sbjct: 421 ALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILID 480

Query: 526 GIAHQDELELSAEVLKEL 543
               + ++E +   L E+
Sbjct: 481 SHCEKGQVEEAFGFLDEM 498



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 209/433 (48%), Gaps = 2/433 (0%)

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
           +++SS    +A +   +V+  CK      A  ++ +ME      + VT+N L+      G
Sbjct: 147 LVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAG 206

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           +++ ++  +D +  KGL P   T++ +L+   K R    A ++   +      P++ S+N
Sbjct: 207 DVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFN 266

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           +L+ G C+ G  EEA++F++++  +G  P+VVS++ L+      G+ + A   L EM G 
Sbjct: 267 ILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGL 326

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P  V Y ++IG     G    AL+V DEMV     P   +YN ++  LC + ++   
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDA 386

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            + L++M  R   P+  T+  L    C  G  ++A  +  +L +++       Y  +I  
Sbjct: 387 EELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDG 446

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           +CRKG   +A +L  +M      P+  TYS LI   C +G +EEA      M      P+
Sbjct: 447 MCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPN 506

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           +  +N+++ G C+S       +  Q M++   +P+  T+  L+ G   ++ +  +  V  
Sbjct: 507 IMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFN 566

Query: 542 ELQLRQVVSESAV 554
            ++ +++V   AV
Sbjct: 567 IME-KEMVQPDAV 578



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 78/145 (53%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  +I +  R G    A  L+  M   G  P   T++S+++GLC     ++A E+F  M+
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD 254

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +    PDV +FN L+ G C+    + +++ ++ M ++G  P+  +++ L+   + + +++
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 535 LSAEVLKELQLRQVVSESAVERLVM 559
            +A  L+E++   +V +  +  +V+
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVI 339


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 221/441 (50%), Gaps = 9/441 (2%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           I P+  ++  ++  +CK G V  A+Q+   M       +  TY +L+ GLC    +++++
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
             LD +   G  P+  T++ L+    K+  +    KL+D++  KG  PN V+YN L+ GL
Sbjct: 225 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGL 284

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C +G+ E+AI     + S    PNVV+Y  ++  L  +GR  +   +LA M+        
Sbjct: 285 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNE 344

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
             Y+ LI  L   GK+  A+++  EM       +   Y+ +I  LC +GK D  ++ L +
Sbjct: 345 YVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSE 404

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M + RCKPN  TY+ L       G   +A  + + +     +  +  Y  +I  LC+ GK
Sbjct: 405 MTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGK 464

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNF 485
             +A  +  +M   G  PD   Y S+I GL   GL+E+AL+++  ++ +E D +PDV  +
Sbjct: 465 VKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTY 524

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH-----QDELE-LSAEV 539
           N LL  LCK      ++++   M+++G  P+  T  I +  +       QD  E L   V
Sbjct: 525 NILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLV 584

Query: 540 LKELQLRQVVSESAVERLVMQ 560
           ++ L+ ++V+  S +  +++Q
Sbjct: 585 VRLLKRQRVLGASKIVEVMLQ 605



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 234/467 (50%), Gaps = 25/467 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA      M     +PDV     L+  LCKA+++ +A+ +++ M   G  P   ++  
Sbjct: 185 VDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 244

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N LCKKG++    +LV+ M   G   N VTYN+L+ GLC+ G L +++  LDR++   
Sbjct: 245 LINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 304

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
            VPN  TY  ++    K+       ++L  +  +G   N   Y+ L++GL KEG+++EA+
Sbjct: 305 CVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAM 364

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           + F+++  K  E N + Y+ ++  LC +G+ +EA E+L+EM      P   TY+ L+   
Sbjct: 365 QLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGF 424

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A+++  +M K  F  +   Y+ +I  LC +GKV   +    QM  + CKP+ 
Sbjct: 425 FEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDV 484

Query: 379 GTY----NGLAMLCGVGKVQEAFAII-QSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
             Y    NGL+     G V++A  +  + L  + +S P    Y  ++ +LC++    +A 
Sbjct: 485 VAYGSMINGLS---NAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAI 541

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF-NALLLG 491
            LL  M   G  PD  T    +R L                E+ D   D   F + L++ 
Sbjct: 542 DLLNSMLDRGCDPDLVTCIIFLRTL---------------REKLDPPQDGREFLDGLVVR 586

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           L K +R   + ++ ++M++K   P  +T+T +VE + +  +++ + +
Sbjct: 587 LLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQ 633



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 158/331 (47%), Gaps = 44/331 (13%)

Query: 255 EEAIRFFRDLPSKGFE--PNVVSYNILLRSLCMEGRWEEANELLAEMDGG---DRSPTIV 309
           E+A+  F D  +  FE    V S+N +L  +  EG +  A E    + G    + SP ++
Sbjct: 112 EKAVGLF-DRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVL 170

Query: 310 TYNILIGSLAYHG-----------------------------------KTDHALKVLDEM 334
           T+N++I ++   G                                   + D A+ +LDEM
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230

Query: 335 -VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
            + G F PS  ++N +I  LC +G +  V K +D MF + C PNE TYN L   LC  GK
Sbjct: 231 QIDGCF-PSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGK 289

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +++A +++  + + +       Y  +I  L ++G+     ++L  M + G+  + Y YS+
Sbjct: 290 LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSA 349

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI GL  EG  +EA+++F  M   + + +   ++A++ GLC+  + D +LEV   M    
Sbjct: 350 LISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNR 409

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             PN  TY+ L++G         + E+ K++
Sbjct: 410 CKPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 145/299 (48%), Gaps = 17/299 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K  +A    + M  K  + + +  + ++  LC+  K  +A++V+  M ++   P+A 
Sbjct: 356 KEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAY 415

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+    + GN   A+++ + M  + +  N V Y+ L+ GLC  G + +++    ++
Sbjct: 416 TYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQM 475

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK--GGKPNLVSYNVLLTGLCKEG 252
           + KG  P+   Y  ++        V  A++L ++++ +    +P++V+YN+LL  LCK+ 
Sbjct: 476 LGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQS 535

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
               AI     +  +G +P++V+  I LR+L    + +   +    +DG           
Sbjct: 536 SISRAIDLLNSMLDRGCDPDLVTCIIFLRTL--REKLDPPQDGREFLDG----------- 582

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV-KCLDQMF 370
            L+  L    +   A K+++ M++    P  +++  ++  LC+  KV   + KC   ++
Sbjct: 583 -LVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSILY 640


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 231/473 (48%), Gaps = 17/473 (3%)

Query: 98  VVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           ++    LL  L K     +   + + M  +G+ P+  +   L+NCLC    V   +  + 
Sbjct: 91  IISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMA 150

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
            +   GY  + VTY SL++GLCM   ++++ +   R+ + G  PN  TY  L++   +  
Sbjct: 151 GIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTG 210

Query: 218 GVHAAMKLLDDII------AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
            ++ A+KL  +++      A   KPN+ SYN+++  LCK G+ +EA R F ++  +G  P
Sbjct: 211 NINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRP 270

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +VV+++ L+ +LC EG   EA + L  M      P + T+  LI      G  D A ++ 
Sbjct: 271 DVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELF 330

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAML 387
             M    + P   SY  +I   C    V+  +K  ++M      P+  T+     GL + 
Sbjct: 331 LSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLA 390

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFY--KYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             VG  ++ F ++     K ++ P+  Y     +  LC+ G  ++A +L  E+  Y    
Sbjct: 391 GKVGDAKKLFGVV-----KPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKL 445

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  +++ LI GLC    +E A E+F  + +   +PDV  +  ++ G CK+ + D +  +F
Sbjct: 446 DIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILF 505

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
           QMM E G  PN  TY+ L+ G    ++LE   ++L ++  + V   +++  +V
Sbjct: 506 QMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIV 558



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 223/458 (48%), Gaps = 18/458 (3%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M   G  P+      L+  LC  N++++ +  M  ++  G IPD  +YT L+  LC +
Sbjct: 115 KKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCME 174

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK------GLV 200
             +  A +L  +M+  G   N VTY +L++GLC  GN+N +L+    ++           
Sbjct: 175 HRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCK 234

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN F+Y+ +++   K      A +L ++++ +G +P++V+++ L+  LCKEG   EA +F
Sbjct: 235 PNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKF 294

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +  +G  P++ ++  L+   C+ G  + A EL   M      P +++Y +LI     
Sbjct: 295 LETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCK 354

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
               + A+K+ +EM++    P   ++  ++  L   GKV    K    +     KP+   
Sbjct: 355 TFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVV-----KPHAVP 409

Query: 381 YN------GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            N       L  LC  G + EA  +   L +       E +  +I  LC+  K   A++L
Sbjct: 410 KNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWEL 469

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             ++++ G  PD  TY  +I G C  G ++ A  +F +MEE    P++  ++ALL G  K
Sbjct: 470 FEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYK 529

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           + + +  +++   MI+K      + YTI VE +  +DE
Sbjct: 530 NNKLEEVVKLLHKMIQKDVSLAASIYTI-VEDMVSKDE 566



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 179/386 (46%), Gaps = 53/386 (13%)

Query: 179 CMLGNLN--QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           C  GN+   Q+LQF D +++     +  +++ LL A  K +       L   +   G  P
Sbjct: 70  CKKGNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSP 124

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N  + N+L+  LC   R  E +     +  +G+ P+VV+Y  L++ LCME R  EA  L 
Sbjct: 125 NFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLF 184

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG------RFRPSAASYNPII 350
             M      P +VTY  LI  L   G  + ALK+  EM+ G        +P+  SYN II
Sbjct: 185 IRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIII 244

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS 410
             LC  GK     +  ++M  +  +P+  T++ L                          
Sbjct: 245 DELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSAL-------------------------- 278

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
                   I +LC++G   +A + L  M   G  PD +T++SLI G C+ G ++ A E+F
Sbjct: 279 --------IDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELF 330

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
           + M    Y+PDV ++  L+ G CK+   + +++++  M+  G+ P+  T+ +L++G    
Sbjct: 331 LSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKG---- 386

Query: 531 DELELSAEVLKELQLRQVVSESAVER 556
             L L+ +V    +L  VV   AV +
Sbjct: 387 --LFLAGKVGDAKKLFGVVKPHAVPK 410



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 146/295 (49%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  +A      MV +G +PDVV  + L+  LCK   + +A K +E M+  GI+PD  ++T
Sbjct: 252 KWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFT 311

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C  G++  A +L   M   GY  + ++Y  L+ G C   N+ ++++  + +++ 
Sbjct: 312 SLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRV 371

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  T+  LL+  +    V  A KL   +       NL   +V L GLCK G   EA
Sbjct: 372 GKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEA 431

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F +L S   + ++ S+N L+  LC   + E A EL  ++      P +VTY I+I  
Sbjct: 432 MELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMING 491

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
              +G+ D+A  +   M +    P+  +Y+ ++       K++ VVK L +M  +
Sbjct: 492 FCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 193/408 (47%), Gaps = 40/408 (9%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS------GI 129
           +H++++A     RM   G  P+VV    L+  LC+   +  A+K+ + M++         
Sbjct: 174 EHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINC 233

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  SY  +++ LCK G    A +L  +M D G   + VT+++L+  LC  G + ++ +
Sbjct: 234 KPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKK 293

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           FL+ ++ +G+VP+ FT++ L+E       + +A +L   + +KG +P+++SY VL+ G C
Sbjct: 294 FLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYC 353

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K    EEA++ + ++   G  P++ ++ +LL+ L + G+  +A +L   +        + 
Sbjct: 354 KTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLY 413

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
             ++ +  L  +G    A+++ +E+     +    S+N +I  LC   K++   +  +++
Sbjct: 414 ICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKL 473

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                +P+  TY      C                             +I   C+ G+  
Sbjct: 474 SQEGLQPDVVTY------C----------------------------IMINGFCKNGQVD 499

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            A  L   M + G TP+  TYS+L+ G      +EE +++   M + D
Sbjct: 500 NANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 547



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 124/243 (51%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M SKG++PDV+  T L+Y  CK   +++A+K+   M+  G  PD  ++  L+  L   G 
Sbjct: 333 MPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           VG A +L   ++ +  P N    +  + GLC  G L ++++  + L    +  +  +++ 
Sbjct: 393 VGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNC 452

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K R +  A +L + +  +G +P++V+Y +++ G CK G+ + A   F+ +   G
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG 512

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN+++Y+ LL       + EE  +LL +M   D S     Y I+   ++   K    L
Sbjct: 513 CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWL 572

Query: 329 KVL 331
            +L
Sbjct: 573 DIL 575



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 72/158 (45%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LCK   + +A+++   + S  +  D  S+  L++ LCK   +  A +L EK+   G   +
Sbjct: 422 LCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPD 481

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            VTY  ++ G C  G ++ +      + + G  PN  TYS LL   YK   +   +KLL 
Sbjct: 482 VVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLH 541

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            +I K        Y ++   + K+ +  E +   +  P
Sbjct: 542 KMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFP 579


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 230/487 (47%), Gaps = 17/487 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA----------------I 118
           ++ +++ A+     M+ +G  P++V   +++  LCKA  M KA                +
Sbjct: 151 KEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAV 210

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           ++++ M   G+ PD  +Y+ L++  CK G    A  + + M   G   +  TY +L+ G 
Sbjct: 211 RLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGY 270

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
              G L      L  +IQ G+      ++ L+ A  K   +  AM    ++  KG  PN+
Sbjct: 271 ATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNV 330

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+Y  ++  LCK GR E+A+  F  + S+G  P+++++  L+  LC  G W++  +L  E
Sbjct: 331 VTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFE 390

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P  +  N ++ SL   G+   A    D+++    +P   SY  +I   C +GK
Sbjct: 391 MINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGK 450

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +D  +K L +M     +P+  TY+ L    C  G+V +A A+ + + +K        Y  
Sbjct: 451 MDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNI 510

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++  L   G+   A +   ++   G      TY+ ++ GLC    ++EAL +F  +   +
Sbjct: 511 ILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKE 570

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           ++ +V  FN +++GL K  R   +  +F  ++  G +P+   Y ++++    +  LE S 
Sbjct: 571 FQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESD 630

Query: 538 EVLKELQ 544
           E+   ++
Sbjct: 631 ELFLSME 637



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 199/423 (47%), Gaps = 35/423 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A      M  KG  P+VV  T ++  LCKA +++ A+     MVS G+ PD  
Sbjct: 307 KNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDII 366

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++ LC  G      +L  +M + G   N +  N+++  LC  G + ++  F D++
Sbjct: 367 TFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQI 426

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I  G+ P+  +Y+ L++    +  +  ++KLL  +++ G +P+ V+Y+ LL G CK GR 
Sbjct: 427 IHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRV 486

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  +R++ SK  +PN ++YNI+L  L   GR   A E   ++        I TYNI+
Sbjct: 487 DDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIV 546

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +G L  +   D AL++   +    F+    ++N +I  L   G+                
Sbjct: 547 LGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGR---------------- 590

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                          +G  +  F+ I   G   ++     Y  +I S   +G   ++ +L
Sbjct: 591 ---------------IGDAKSLFSAILPSGLVPDAI---IYGLMIQSHIEEGLLEESDEL 632

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M K G T +S T ++++R L  +G +  A      ++E +Y  +      LL+ +  
Sbjct: 633 FLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEAST-AVLLISIVS 691

Query: 495 SRR 497
            R+
Sbjct: 692 ERK 694



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 222/514 (43%), Gaps = 77/514 (14%)

Query: 84  LQLERMVSKGHKPDVV---QATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           LQLER++ + H+   +    A NL  +L    +   ++     +++     D+SS     
Sbjct: 13  LQLERIIVEQHRSGSLGLEDALNLFDELLPRAR-SASVHAFNRVLTVVAHGDSSS----- 66

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGY---PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
               ++     A+ L   M   G     T+  T+  L+R  C +G L+ +L+   R  + 
Sbjct: 67  ---SQRHGAALAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRA 123

Query: 198 GL----------VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
            +           PN  +Y+ ++   +KE  V  A  L  +++ +G  PN+V+YN ++ G
Sbjct: 124 AVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDG 183

Query: 248 LCK----------------EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           LCK                +G+ EEA+R  + +   G +P+VV+Y++L+   C  GR  E
Sbjct: 184 LCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTE 243

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  +   M    ++P   TY  L+   A  G       +L  M++         +N +I 
Sbjct: 244 ARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIR 303

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEA---FAIIQSLG--- 404
                  +D  +    +M  +   PN  TY   + +LC  G+V++A   F+ + S G   
Sbjct: 304 AYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSP 363

Query: 405 -----------------------------NKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
                                        N+       F   ++ SLC++G+  +A    
Sbjct: 364 DIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFF 423

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            ++   G  PD  +Y+ LI G C++G ++E++++   M     +PD   ++ALL G CK+
Sbjct: 424 DQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKN 483

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
            R D +L +++ M  K   PN  TY I++ G+ H
Sbjct: 484 GRVDDALALYREMFSKDVKPNAITYNIILHGLFH 517



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 153/308 (49%), Gaps = 1/308 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++ ++ +A    ++++  G KPDVV  T L+   C   KM ++IK++  MVS G+ 
Sbjct: 408 DSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLR 467

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L+N  CK G V  A+ L  +M       N +TYN ++ GL   G +  + +F
Sbjct: 468 PDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREF 527

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             +++  G+     TY+ +L    +   V  A+++   + +K  +  + ++N+++ GL K
Sbjct: 528 YMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLK 587

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  +A   F  +   G  P+ + Y ++++S   EG  EE++EL   M+    +    T
Sbjct: 588 VGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRT 647

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
            N ++  L   G    A   L ++ +  +   A++   +I+ + SE K    VK L + +
Sbjct: 648 LNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLIS-IVSERKYQKEVKFLPEKY 706

Query: 371 HRRCKPNE 378
               +P +
Sbjct: 707 QSFMEPRD 714


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 230/464 (49%), Gaps = 2/464 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + MV+ G   ++  AT+L+   C    ++ A+ ++  +  SG++P+  +Y+ L++  CK 
Sbjct: 134 DDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKN 193

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           GN+  A +   +M+  G  ++  + NS++ G     +   +    +  ++ GL  N FT+
Sbjct: 194 GNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTF 252

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + LL    KE  ++ A  L D++IAKG  PN+VSYN ++ G C++     A + ++++  
Sbjct: 253 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 312

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            GF PN V++ IL+     +G  E A  +   M   +  PT  T  I+I  L   G++  
Sbjct: 313 NGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFE 372

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
              + ++ V   F P+   YN II     EG ++L      +M      P+  TY  L  
Sbjct: 373 GRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLID 432

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C    +  A  ++  +  K      + Y  +I   C++     A +LL E+   G +P
Sbjct: 433 GFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSP 492

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           + + Y+S+I G      +EEA++++  M       D+  + +L+ GL KS R   + ++ 
Sbjct: 493 NRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIH 552

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             M+ KG +P++  +T+L+ G+ ++ + E + ++L+++  + ++
Sbjct: 553 TEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMI 596



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 201/423 (47%), Gaps = 8/423 (1%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           + G+  D  +Y+  V+ LC K N GYA+ L+ +M   G+     T+ S++      GN+ 
Sbjct: 68  ARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVA 127

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           ++L+  D ++  G   N    + L++    +  + +A+ L+++I   G  PN V+Y+VL+
Sbjct: 128 EALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLI 187

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-MDGGDR 304
            G CK G  E+A  F+ ++ +KG   +V S N +L        W+ A  +  + ++ G  
Sbjct: 188 DGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG-- 245

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
              + T+N L+  L   GK + A  + DE++     P+  SYN II   C +  ++   K
Sbjct: 246 LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK 305

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
              +M      PN  T+    ++ G    G ++ AF+I   + +            +I  
Sbjct: 306 VYKEMLDNGFTPNAVTFT--ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKG 363

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC+ G++++   L  +    GF P    Y+++I G   EG I  A  ++  M E    P 
Sbjct: 364 LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPS 423

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              + +L+ G CK    DL+L++   M  KG   +   Y  L++G   + +++ + E+L 
Sbjct: 424 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 483

Query: 542 ELQ 544
           EL+
Sbjct: 484 ELR 486



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 207/455 (45%), Gaps = 6/455 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +  AF     M +KG +  V    ++L    K    + A  +    + SG+  +  
Sbjct: 192 KNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVF 250

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ LCK+G +  A  L +++   G   N V+YN+++ G C   N+N + +    +
Sbjct: 251 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 310

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  PNA T++ L++  +K+  +  A  +   +      P   +  +++ GLCK GR+
Sbjct: 311 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            E    F    S+GF P  + YN ++     EG    A+ +  EM     +P+ VTY  L
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 430

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I         D ALK+L++M +   +    +Y  +I   C    +    + L+++     
Sbjct: 431 IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGL 490

Query: 375 KPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            PN   YN  +M+ G   +  V+EA  + + + N+      + Y  +I  L + G+   A
Sbjct: 491 SPNRFIYN--SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYA 548

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             +  EM   G  PD   ++ LI GLC +G  E A +I   M   +  P V  +N L+ G
Sbjct: 549 SDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 608

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             K      +  +   M+++G +P+  TY ILV G
Sbjct: 609 HFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 186/424 (43%), Gaps = 18/424 (4%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + P       L+  + +K     A +L  KM   G   +  T + ++R     GN+ ++ 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           Q   +   +G+  +   YS  +     +     A+ LL ++ A G  P   ++  ++T  
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            KEG   EA+R   D+ + G   N+     L++  CM+G    A  L+ E+      P  
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VTY++LI     +G  + A +   EM     R S  S N I+     EG     +KC   
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL-----EG----YLKCQSW 231

Query: 369 -----MFHRRCK---PNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                MF+   +    N  T+N  L+ LC  GK+ EA  +   +  K  S     Y  +I
Sbjct: 232 QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 291

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              CRK     A ++  EM   GFTP++ T++ L+ G   +G IE A  IF  M++ +  
Sbjct: 292 LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANIL 351

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P       ++ GLCK+ R+    ++F   + +G +P    Y  +++G   +  + L++ V
Sbjct: 352 PTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNV 411

Query: 540 LKEL 543
            +E+
Sbjct: 412 YREM 415



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 160/347 (46%), Gaps = 2/347 (0%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+    + LL A  ++     A +L + ++  G   +  + +V+L    KEG   EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           + F    ++G E +  +Y+I +  LC++     A  LL EM      P   T+  +I + 
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    AL++ D+MV      + A    ++   C +G +   +  ++++      PN+
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ L    C  G +++AF     +  K   S       ++    +      AF +  +
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
             + G   + +T+++L+  LC EG + EA  ++  +      P+V ++N ++LG C+   
Sbjct: 241 ALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDN 299

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + + +V++ M++ G  PN  T+TIL++G   + ++E +  +   ++
Sbjct: 300 INAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 346



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 86/158 (54%), Gaps = 1/158 (0%)

Query: 62  PNRKPGNNNDTRHRD-HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PNR   N+  T  ++ + + +A    ++MV++G   D+   T+L+  L K+ ++  A  +
Sbjct: 492 PNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDI 551

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
              M+S GI+PD  ++T L+N LC KG    A +++E M       + + YN+L+ G   
Sbjct: 552 HTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFK 611

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
            GNL ++ +  D ++ +GLVP+  TY  L+   +K  G
Sbjct: 612 EGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDG 649



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           + RD K   A   L  +   G  P+     +++      N +++AI + + MV+ GI  D
Sbjct: 471 KRRDMK--SAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCD 528

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +YT L++ L K G + YA  +  +M   G   +   +  L+ GLC  G    + + L+
Sbjct: 529 LKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILE 588

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
            +  K ++P+   Y+ L+   +KE  +  A +L D+++ +G  P+ ++Y++L+ G
Sbjct: 589 DMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 65/139 (46%)

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           QE Y   +  LC K  +  A  LL EM   G+ P   T++S+I     EG + EAL +  
Sbjct: 75  QEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKD 134

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M       ++    +L+ G C       +L +   + E G +PN+ TY++L++G     
Sbjct: 135 DMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNG 194

Query: 532 ELELSAEVLKELQLRQVVS 550
            +E + E   E++ + + S
Sbjct: 195 NIEKAFEFYSEMKTKGIRS 213


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 208/429 (48%), Gaps = 6/429 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+     P +V  + +L  + K+      I +   M   GI  D  SY  ++NCLC+   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ +V KM  +GY  + VT +SL+ G C    +  ++  + ++ + G  P+   Y+ 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +++ + K   V+ A++L D +   G + + V+YN L+ GLC  GR  +A R  RD+  + 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PNV+++  ++     EG++ EA +L  EM      P + TYN LI  L  HG+ D A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           ++LD MV     P   +YN +I   C   +VD   K   +M  R    +  TYN +    
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
              G+   A    Q + ++ +S P    Y  ++  LC   +  +A  L   M K     D
Sbjct: 301 FQAGRPDAA----QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ +I G+C  G +E+A ++F  +     KPDV ++  ++ G C+ R+ D S  +++
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 416

Query: 507 MMIEKGQMP 515
            M E G +P
Sbjct: 417 KMQEDGLLP 425



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 204/422 (48%), Gaps = 4/422 (0%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M+ S  +P    ++ +++ + K  N    + L   ME  G   +  +YN ++  LC    
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
              +L  + ++++ G  P+  T S L+    +   V  A+ L+  +   G +P++V YN 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++ G CK G   +A+  F  +   G   + V+YN L+  LC  GRW +A  L+ +M   D
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P ++T+  +I      GK   A+K+ +EM +    P   +YN +I  LC  G+VD   
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           + LD M  + C P+  TYN L    C   +V E   + + +  +        Y  +I   
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
            + G+   A ++   M      P+  TYS L+ GLCM   +E+AL +F  M++ + + D+
Sbjct: 301 FQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N ++ G+CK    + + ++F+ +  KG  P+  +YT ++ G   + + + S  + ++
Sbjct: 358 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 417

Query: 543 LQ 544
           +Q
Sbjct: 418 MQ 419



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 187/360 (51%), Gaps = 6/360 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M+  G++PDVV  ++L+   C+ N++  AI ++  M   G  PD   Y  +++  CK G
Sbjct: 70  KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 129

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A++L ++ME  G   + VTYNSLV GLC  G  + + + +  ++ + +VPN  T++
Sbjct: 130 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 189

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            +++   KE     AMKL +++  +   P++ +YN L+ GLC  GR +EA +    + +K
Sbjct: 190 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 249

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+VV+YN L+   C   R +E  +L  EM         +TYN +I      G+ D A
Sbjct: 250 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 309

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            ++   M     RP+  +Y+ ++  LC   +V+  +   + M     + +  TYN +   
Sbjct: 310 QEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 366

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY-EMTKYGFTP 445
           +C +G V++A+ + +SL  K        Y  +I+  CRK + +    LLY +M + G  P
Sbjct: 367 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK-RQWDKSDLLYRKMQEDGLLP 425



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 161/353 (45%), Gaps = 34/353 (9%)

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +IQ   +P+   +S +L    K +     + L   +   G   +L SYN+++  LC+  R
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              A+     +   G+EP+VV+ + L+   C   R  +A +L+++M+     P +V YN 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I      G  + A+++ D M +   R  A +YN ++A LC  G+     + +  M  R 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             PN  T+                                    VI    ++GK  +A +
Sbjct: 181 IVPNVITFTA----------------------------------VIDVFVKEGKFSEAMK 206

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EMT+    PD +TY+SLI GLCM G ++EA ++  +M      PDV  +N L+ G C
Sbjct: 207 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 266

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           KS+R D   ++F+ M ++G + +  TY  +++G       + + E+   +  R
Sbjct: 267 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 319



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 121/229 (52%), Gaps = 3/229 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K ++A    E M  +   PDV    +L+  LC   ++ +A +++++MV+ G +
Sbjct: 193 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 252

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+N  CK   V    +L  +M   G   +T+TYN++++G    G  + + + 
Sbjct: 253 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 312

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+  +   PN  TYS LL        V  A+ L +++     + ++ +YN+++ G+CK
Sbjct: 313 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 369

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            G  E+A   FR L  KG +P+VVSY  ++   C + +W++++ L  +M
Sbjct: 370 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 418



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P++V ++ +L+ + K    +  I  F  +   G   ++ SYNI++  LC   R+  A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           + +M      P +VT + LI       +   A+ ++ +M +  FRP    YN II   C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            G V+  V+  D+M     + +  TYN L                               
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSL------------------------------- 156

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
              +  LC  G+   A +L+ +M      P+  T++++I     EG   EA++++  M  
Sbjct: 157 ---VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 213

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               PDV  +N+L+ GLC   R D + ++  +M+ KG +P+  TY  L+ G      ++ 
Sbjct: 214 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 273

Query: 536 SAEVLKELQLRQVVSESAVERLVMQYDFEG 565
             ++ +E+  R +V ++     ++Q  F+ 
Sbjct: 274 GTKLFREMAQRGLVGDTITYNTIIQGYFQA 303


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 215/455 (47%), Gaps = 35/455 (7%)

Query: 75  RDHKLNDAFLQLERMVSK-GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           R  ++ D  L  + M++K    P+V   + LL+ L K      A+++ + M++ GI PD 
Sbjct: 168 RSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDV 227

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             YT ++  LC+  ++  A +++ +ME  G   N V YN L+ GLC    + +++     
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L  K L P+  TY  L+    K +     ++++D+++     P+  + + L+ GL K G+
Sbjct: 288 LAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGK 347

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA+   + +   G  PN+  YN L+ SLC    ++EA  L   M      P  VTY+I
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSI 407

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      GK D AL  L EM+    +PS   YN +I   C  G +      + +M +++
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            +P   TY  L                                  +   C KGK  +A +
Sbjct: 468 LEPTVVTYTSL----------------------------------MGGYCSKGKINKALR 493

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L +EMT  G  P  YT+++L+ GL   GLI +A+++F  M E++ KP+   +N ++ G C
Sbjct: 494 LYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYC 553

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +      + E    MIEKG +P+  +Y  L+ G+ 
Sbjct: 554 EEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLC 588



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 222/460 (48%), Gaps = 3/460 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+ +A    + +  K  KPDVV    L+  LCK  + +  +++++ M+     
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFS 329

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P  ++ + LV  L K+G V  A+ LV+++ ++G   N   YN+L+  LC   N +++   
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELL 389

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            DR+ + GL PN  TYS L++   +   +  A+  L ++I  G KP++  YN L+ G CK
Sbjct: 390 FDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCK 449

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G    A     ++ +K  EP VV+Y  L+   C +G+  +A  L  EM G    P+I T
Sbjct: 450 FGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYT 509

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +  L+  L   G    A+K+  EM +   +P+  +YN +I   C EG +    + L++M 
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMI 569

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKT 428
            +   P+  +Y  L   LC  G+  EA   +  L +K N    E  Y  ++   CR+GK 
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL-HKGNCELNEICYTGLLHGFCREGKL 628

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A  +  +M   G   D   Y  LI G       +  L +   M +   KPD   + ++
Sbjct: 629 EEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSM 688

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +    K+     +  ++ +MI +G +PNE TYT ++ G+ 
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 221/464 (47%), Gaps = 6/464 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ M+     P     ++L+  L K  K+++A+ +++ +   G+ P+   Y  L++ LCK
Sbjct: 320 IDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCK 379

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             N   A  L ++M   G   N VTY+ L+   C  G L+ +L FL  +I  GL P+ + 
Sbjct: 380 GRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYP 439

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K   + AA  L+ ++I K  +P +V+Y  L+ G C +G+  +A+R + ++ 
Sbjct: 440 YNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P++ ++  LL  L   G   +A +L  EM   +  P  VTYN++I      G   
Sbjct: 500 GKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMS 559

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A + L+EM++    P   SY P+I  LC  G+       +D +    C+ NE  Y GL 
Sbjct: 560 KAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  GK++EA ++ Q +G +        Y  +I    +         LL EM   G  
Sbjct: 620 HGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLK 679

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD   Y+S+I      G  +EA  I+ +M      P+   + A++ GLCK+   + +  +
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEIL 739

Query: 505 FQMMIEKGQMPNETTY----TILVEGIAH-QDELELSAEVLKEL 543
              M     +PN+ TY     IL +G+   +  +EL   +LK L
Sbjct: 740 CSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGL 783



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 224/515 (43%), Gaps = 41/515 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +    ++A L  +RM   G  P+ V  + L+   C+  K+  A+  +  M+  G+ 
Sbjct: 375 DSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLK 434

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    Y  L+N  CK G++  A  L+ +M +       VTY SL+ G C  G +N++L+ 
Sbjct: 435 PSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG+VP+ +T++ LL   ++   +  A+KL  ++     KPN V+YNV++ G C+
Sbjct: 495 YHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCE 554

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG   +A  F  ++  KG  P+  SY  L+  LC+ G+  EA   +  +  G+     + 
Sbjct: 555 EGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614

Query: 311 YNILIGSLAYHGKTDHALKV-----------------------------------LDEMV 335
           Y  L+      GK + AL V                                   L EM 
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMH 674

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
               +P    Y  +I      G         D M +  C PNE TY   +  LC  G V 
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG--KTYQAFQLLYEMTKYGFTPDSYTYSS 452
           EA  I+ S     NS P +        +  KG     +A +L   + K G   ++ TY+ 
Sbjct: 735 EA-EILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNM 792

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LIRG C +G +EEA E+   M      PD   +  ++  LC+      ++E++  M EKG
Sbjct: 793 LIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKG 852

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
             P+   Y  L+ G     E+  + E+  E+ LRQ
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATELRNEM-LRQ 886



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 221/443 (49%), Gaps = 8/443 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  M++K  +P VV  T+L+   C   K+ KA+++   M   GI+P   ++T L++ L +
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A++L  +M ++    N VTYN ++ G C  GN++++ +FL+ +I+KG+VP+ ++
Sbjct: 520 AGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYS 579

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+           A   +D +     + N + Y  LL G C+EG+ EEA+   +D+ 
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMG 639

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G + ++V Y +L+         +    LL EM      P  V Y  +I + +  G   
Sbjct: 640 LRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A  + D M+     P+  +Y  +I  LC  G V+       +M      PN+ TY    
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFL 759

Query: 385 -AMLCGVGKVQEAFAIIQSL--GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             +  GVG +++A  +  ++  G   N++    Y  +I   CR+G+  +A +L+  M   
Sbjct: 760 DILTKGVGDMKKAVELHNAILKGLLANTAT---YNMLIRGFCRQGRMEEASELITRMIGD 816

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G +PD  TY+++I  LC    +++A+E++  M E   +PD   +N L+ G C +     +
Sbjct: 817 GVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876

Query: 502 LEVFQMMIEKGQMPN-ETTYTIL 523
            E+   M+ +G  PN ET+ T +
Sbjct: 877 TELRNEMLRQGLKPNTETSETTI 899



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 226/506 (44%), Gaps = 41/506 (8%)

Query: 49  QVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL 108
            V I P   +YT   R      D       L+ A   + +M + G   ++V    L+  L
Sbjct: 220 NVGIRPDVYIYTGVIRSLCELKD-------LSRAKEMIVQMEATGCDVNIVPYNVLIDGL 272

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           CK  K+ +A+ + + +    + PD  +Y  LV  LCK       ++++++M    +  + 
Sbjct: 273 CKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSE 332

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
              +SLV GL   G + ++L  + R+ + G+ PN F Y+ L+++  K R    A  L D 
Sbjct: 333 AAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDR 392

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +   G  PN V+Y++L+   C+ G+ + A+ F  ++   G +P+V  YN L+   C  G 
Sbjct: 393 MGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGD 452

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
              A  L+AEM      PT+VTY  L+G     GK + AL++  EM      PS  ++  
Sbjct: 453 ISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTT 512

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN 408
           +++ L   G +   VK   +M     KPN  TYN                          
Sbjct: 513 LLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYN-------------------------- 546

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                    +I   C +G   +AF+ L EM + G  PD+Y+Y  LI GLC+ G   EA  
Sbjct: 547 --------VMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
               + + + + +   +  LL G C+  + + +L V Q M  +G   +   Y +L++G  
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSL 658

Query: 529 HQDELELSAEVLKELQLRQVVSESAV 554
              + ++   +LKE+  R +  +  +
Sbjct: 659 KHKDRKVFLGLLKEMHDRGLKPDDVI 684



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 187/387 (48%), Gaps = 7/387 (1%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T ++L+ GL    +   +++  D +I  G+ P+ + Y+ ++ +  + + +  A +++  +
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQM 253

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
            A G   N+V YNVL+ GLCK+ +  EA+   +DL  K  +P+VV+Y  L+  LC    +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEF 313

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           E   E++ EM     SP+    + L+  L   GK + AL ++  + +    P+   YN +
Sbjct: 314 EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNAL 373

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ---SLGN 405
           I  LC     D      D+M      PN+ TY+ L  M C  GK+  A + +     +G 
Sbjct: 374 IDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGL 433

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K +  P   Y  +I   C+ G    A  L+ EM      P   TY+SL+ G C +G I +
Sbjct: 434 KPSVYP---YNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           AL ++  M      P +  F  LL GL ++     ++++F  M E    PN  TY +++E
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIE 550

Query: 526 GIAHQDELELSAEVLKELQLRQVVSES 552
           G   +  +  + E L E+  + +V ++
Sbjct: 551 GYCEEGNMSKAFEFLNEMIEKGIVPDT 577



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 151/317 (47%), Gaps = 5/317 (1%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P + + + LL GL K      A+  F D+ + G  P+V  Y  ++RSLC       A E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           + +M+       IV YN+LI  L    K   A+ +  ++     +P   +Y  ++  LC 
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
             + ++ ++ +D+M   R  P+E   + L   L   GKV+EA  +++ +  +   SP  F
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVA-EFGVSPNIF 368

Query: 415 -YKYVITSLCRKGKTYQAFQLLYE-MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
            Y  +I SLC KG+ +   +LL++ M K G  P+  TYS LI   C  G ++ AL     
Sbjct: 369 VYNALIDSLC-KGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGE 427

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M +   KP V  +N+L+ G CK      +  +   MI K   P   TYT L+ G   + +
Sbjct: 428 MIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGK 487

Query: 533 LELSAEVLKELQLRQVV 549
           +  +  +  E+  + +V
Sbjct: 488 INKALRLYHEMTGKGIV 504



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 126/277 (45%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ KL +A    + M  +G   D+V    L+    K    K  + +++ M   G+ PD  
Sbjct: 624 REGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDV 683

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT +++   K G+   A  + + M + G   N VTY +++ GLC  G +N++     ++
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM 743

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                VPN  TY   L+   K  G       L + I KG   N  +YN+L+ G C++GR 
Sbjct: 744 RPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRM 803

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA      +   G  P+ ++Y  ++  LC     ++A EL   M      P  V YN L
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           I      G+   A ++ +EM++   +P+  +    I+
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 244/485 (50%), Gaps = 17/485 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H+  +A   L  M   G  P+ V    L+   C+A ++ +A ++++MM   G+ P+  
Sbjct: 170 RGHR-KEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLV 228

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  +VN +CK G +  A ++ ++M   G   + V+YN+LV G C +G  +++L     +
Sbjct: 229 TFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEM 288

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +KG++P+  T++ L+    K   +  A+ L+ ++  +G + N +++  L+ G CK+G  
Sbjct: 289 TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFL 348

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+   R++     +P+VV YN L+   CM GR +EA EL+ EM+     P +VTY+ +
Sbjct: 349 DDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTI 408

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + +   +G T  A ++  +M++    P A +Y+ +I  LC E ++         M     
Sbjct: 409 LSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGL 468

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+E TY  L    C  G V+ A ++   +           Y  +I  L +  +T +A +
Sbjct: 469 QPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQR 528

Query: 434 LLYEMTKYGFTPDSYTYSSLIR---------------GLCMEGLIEEALEIFVVMEEYDY 478
           LL+++      P +  Y +L+R               G CM+GL+ EA +++  + + ++
Sbjct: 529 LLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNW 588

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
             D   ++ L+ G C+      +L   + M++ G  PN T+   L+ G+  +  +  + +
Sbjct: 589 NLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQ 648

Query: 539 VLKEL 543
           V+++L
Sbjct: 649 VIQQL 653



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 216/455 (47%), Gaps = 16/455 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    + MV +G  PD V    L+   CK     +A+ V   M   GI+PD  ++T
Sbjct: 242 RMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFT 301

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ +CK GN+  A+ LV +M + G   N +T+ +L+ G C  G L+ +L  +  + Q 
Sbjct: 302 SLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQC 361

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+   Y+ L+        +  A +L+ ++ AKG KP++V+Y+ +L+  CK G T  A
Sbjct: 362 RIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSA 421

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +  + +   G  P+ ++Y+ L+R LC E R  +A+ L   M      P  VTY  LI  
Sbjct: 422 FQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDG 481

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR----- 372
               G  + AL + DEMVK    P   +Y+ +I  L    +     + L +++H      
Sbjct: 482 HCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPA 541

Query: 373 --------RCKPNEGTYNGLAML---CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
                   RC  N    + LA+L   C  G + EA  + QS+ ++  +     Y  +I  
Sbjct: 542 NIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHG 601

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            CR+G   +A     +M + GF P+S +  SLIRGL  +G++ EA ++   +       D
Sbjct: 602 HCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLAD 661

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            +   AL+    K    D  L+V   M   G +P+
Sbjct: 662 AEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 2/282 (0%)

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G+ P+V++YN +L +L  +     A      M     +P + TYNIL+ +L   G    A
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
           L VL +M      P+A +YN ++A  C  G+VD   + +D M     KPN  T+N +   
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           +C  G++++A  +   +  +  +     Y  ++   C+ G +++A  +  EMT+ G  PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             T++SLI  +C  G +E A+ +   M E   + +   F AL+ G CK    D +L   +
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            M +    P+   Y  L+ G      ++ + E+++E++ + V
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGV 398


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 213/462 (46%), Gaps = 19/462 (4%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           V   N    LC   K  KA ++++ M+  G +PD S+Y+ ++  LC    V  A  L ++
Sbjct: 254 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 313

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+  G   +  TY  L+   C  G + Q+    + +   G  P   TY+ L+ A  K + 
Sbjct: 314 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 373

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG---------- 268
           V  A  +   ++  G +PN V+Y  L+ GLCK G   +A   +  L              
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433

Query: 269 ------FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
                   PNVV+Y  L+  LC   + + A+ELL  M      P  + Y+ LI      G
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A +V  +M K  + PS  +Y  +I R+  +G++DL +K L QM    C PN  TY 
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +   LC +G+ ++A  ++  +  K  S     Y  +I  L + GK   +  L  +M++ 
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G +P+  TY  LI  LC  GL+++A  +   M++  +   +  +   + G  KS     S
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--S 671

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L + + M   G +P    Y +L++  +    LE++ E+ KE+
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 237/526 (45%), Gaps = 60/526 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K + AF  ++ M+ KG  PD    + ++  LC A K++KA  + + M   G+ PD  +YT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 138 YLVNCLCKKGNVGYAMQLVEKME-----------------------------------DY 162
            L++  CK G +  A  L E+M                                    D 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI----------------QKGLVPNAFTY 206
           G   N VTY +LV GLC  GN++++ +   +LI                +  L PN  TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L++   K   V  A +LLD +++ G +PN + Y+ L+ G CK G+ + A   F  +  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G+ P+V +Y  L+  +  +GR + A ++L++M     +P +VTY  +I  L   G+++ 
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           ALK+L  M +    P+  +Y  +I  L   GK+DL +    QM  + C PN  TY  L  
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G + +A  ++  +  KQ   P+    Y             +  +L EM  YG  P
Sbjct: 628 HLCAAGLLDKARLLLGEM--KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVP 685

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEY--DYKPDVDNFNALLLGLCKSRRTDLSLE 503
            +  Y  LI      G +E A+E+   M E     K D D + +L+  LC + + + +  
Sbjct: 686 IAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 745

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAH----QDELELSAEVLKELQL 545
           ++  M  +G +P  + +  L++G+       + L+L   +  E+ L
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGL 791



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 231/525 (44%), Gaps = 60/525 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            ++A   L RM      P+VV    LL    K  ++    +++ MM++ G  P+ S +  
Sbjct: 123 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 182

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV----------------------- 175
           LV+  C + +  YA +L+ +M   G P   V YN  +                       
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 242

Query: 176 ------------------RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
                             R LC +G  +++ Q +  +++KG VP+  TYS ++       
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            V  A  L  ++   G  P++ +Y +L+   CK G  E+A   F ++ S G  P VV+Y 
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 278 ILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV- 335
            L+ +     +  +AN++   M D G R P  VTY  L+  L   G    A +V  +++ 
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCR-PNDVTYGALVDGLCKAGNISKAFEVYAKLIG 421

Query: 336 ---------------KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                          +    P+  +Y  ++  LC   KVD   + LD M    C+PN   
Sbjct: 422 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y+ L    C  GK+  A  +   +           Y  +I  + + G+   A ++L +M 
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           K   TP+  TY+++I GLC  G  E+AL++  +MEE    P+V  + AL+ GL K+ + D
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           LSL++F  M  KG  PN  TY +L+  +     L+ +  +L E++
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 233/501 (46%), Gaps = 57/501 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  AFL  + M   G  PDV   T L+   CKA  +++A  + E M S G  P   +YT
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI-- 195
            L++   K   V  A  +  +M D G   N VTY +LV GLC  GN++++ +   +LI  
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 196 --------------QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
                         +  L PN  TY  L++   K   V  A +LLD +++ G +PN + Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + L+ G CK G+ + A   F  +   G+ P+V +Y  L+  +  +GR + A ++L++M  
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P +VTY  +I  L   G+++ ALK+L  M +    P+  +Y  +I  L   GK+DL
Sbjct: 543 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 602

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP--------- 411
            +    QM  + C PN  TY  L   LC  G + +A  ++  +  KQ   P         
Sbjct: 603 SLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM--KQTYWPKYLQGYRCA 660

Query: 412 -QEFYKYVITSL-----------------------C--RKGKTYQAFQLLYEMTKY--GF 443
            Q F K  I SL                       C  + G+   A +L  EM +     
Sbjct: 661 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV 720

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D+  Y+SLI+ LC+   +EEA  ++  M    + P++  F  L+ GL + ++ D +L+
Sbjct: 721 KTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 780

Query: 504 V-FQMMIEKGQMPNETTYTIL 523
           + + +  E G + + TT   L
Sbjct: 781 LCYGICHEVGLLLSYTTQIFL 801



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 210/474 (44%), Gaps = 26/474 (5%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G++P  V    L+  L  A ++    +V + M  SG   D  +     + LCK+G    A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + ++E+ ED+    +TV    ++ GL      ++++ FL R+     +PN  TY  LL  
Sbjct: 95  LDMIER-EDF--KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K++ +    ++++ ++ +G  PN   +N L+   C E     A +    + + G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 273 VVSYNILLRSLCMEGR------WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            V YNI + S+C + +       + A ++  EM   +     V        L   GK D 
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A +++ EM++  F P  ++Y+ +I  LC   KV+       +M      P+  TY  L  
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C  G +++A  + + + +   S     Y  +I +  +  +  QA  + + M   G  P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVM----------------EEYDYKPDVDNFNALL 489
           +  TY +L+ GLC  G I +A E++  +                + +   P+V  + AL+
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            GLCK+ + D + E+   M+  G  PN   Y  L++G     +++ + EV  ++
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 177/395 (44%), Gaps = 12/395 (3%)

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
           + ++D+GY  + VTYN+LV+ L   G ++   +    + + G   + FT      A  KE
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 217 -RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            R   A    LD I  +  K + V    +++GL +    +EA+ F   +      PNVV+
Sbjct: 89  GRWADA----LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  LL     + +      ++  M     +P    +N L+ S        +A K+L+ M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 336 KGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMFHRRCKPNEGTYNGLA-MLC 388
                P    YN  I  +C + K+      DL  K   +M    C  N+      A  LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
           GVGK  +AF +I+ +  K        Y  VIT LC   K  +AF L  EM   G TPD Y
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY+ LI   C  GLIE+A  +F  M      P V  + AL+    K+++   + ++F  M
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           ++ G  PN+ TY  LV+G+     +  + EV  +L
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 4/308 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + HK++ A   L+ M+S G +P+ +    L+   CKA K+  A +V   M   G +
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 511

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +YT L++ + K G +  AM+++ +M       N VTY +++ GLC +G   ++L+ 
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + +KG  PN  TY+ L++   K   +  ++ L   +  KG  PN V+Y VL+  LC 
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A     ++    +   +  Y   ++       +  +  +L EM+     P    
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPV 689

Query: 311 YNILIGSLAYHGKTDHALKVLDEM--VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           Y +LI   +  G+ + A+++  EM  V    +     Y  +I  LC   +V+   +   +
Sbjct: 690 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 749

Query: 369 MFHRRCKP 376
           M  R   P
Sbjct: 750 MTRRGFVP 757



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 35/260 (13%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L +M+     P+VV  T ++  LC+  + +KA+K++ +M   G  
Sbjct: 522 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 581

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC----------M 180
           P+  +YT L++ L K G +  ++ L  +M   G   N VTY  L+  LC          +
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641

Query: 181 LGNLNQ-----------------------SLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           LG + Q                       SL  L+ +   G VP A  Y  L++   K  
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAG 701

Query: 218 GVHAAMKLLDDI--IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            +  AM+L  ++  +    K +   Y  L+  LC   + EEA R + ++  +GF P +  
Sbjct: 702 RLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSV 761

Query: 276 YNILLRSLCMEGRWEEANEL 295
           +  L++ L    +W+EA +L
Sbjct: 762 FVCLIKGLVEVKKWDEALQL 781



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/351 (21%), Positives = 151/351 (43%), Gaps = 49/351 (13%)

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           L A+ +    HAA    D +   G +P+ V+YN L+  L   G+ +   R  +++   GF
Sbjct: 12  LRASLRRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGF 71

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
             +  +      +LC EGRW +A +++   D   +  T++  +++ G L      D A+ 
Sbjct: 72  CMDRFTVGCFAHALCKEGRWADALDMIEREDF--KLDTVLCTHMISG-LMEASYFDEAMS 128

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
            L  M      P+  +Y  +++    + ++    + ++ M    C PN   +N L     
Sbjct: 129 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL----- 183

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
                     + S  N+++      Y Y             A++LL  MT  G  P    
Sbjct: 184 ----------VHSYCNEKD------YAY-------------AYKLLNRMTTCGCPPGYVV 214

Query: 450 YSSLIRGLCME------GLIEEALEIFVVMEEYDY---KPDVDNFNALLLGLCKSRRTDL 500
           Y+  I  +C +       L++ A +I+  M   +    K +V NF   L G+ K    D 
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDK 271

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           + ++ + M+ KG +P+ +TY+ ++  + H  ++E +  + +E+++  V  +
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 213/462 (46%), Gaps = 19/462 (4%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           V   N    LC   K  KA ++++ M+  G +PD S+Y+ ++  LC    V  A  L ++
Sbjct: 254 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 313

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+  G   +  TY  L+   C  G + Q+    + +   G  P   TY+ L+ A  K + 
Sbjct: 314 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 373

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG---------- 268
           V  A  +   ++  G +PN V+Y  L+ GLCK G   +A   +  L              
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433

Query: 269 ------FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
                   PNVV+Y  L+  LC   + + A+ELL  M      P  + Y+ LI      G
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A +V  +M K  + PS  +Y  +I R+  +G++DL +K L QM    C PN  TY 
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +   LC +G+ ++A  ++  +  K  S     Y  +I  L + GK   +  L  +M++ 
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G +P+  TY  LI  LC  GL+++A  +   M++  +   +  +   + G  KS     S
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--S 671

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L + + M   G +P    Y +L++  +    LE++ E+ KE+
Sbjct: 672 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 229/504 (45%), Gaps = 56/504 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K + AF  ++ M+ KG  PD    + ++  LC A K++KA  + + M   G+ PD  +YT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 138 YLVNCLCKKGNVGYAMQLVEKME-----------------------------------DY 162
            L++  CK G +  A  L E+M                                    D 
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI----------------QKGLVPNAFTY 206
           G   N VTY +LV GLC  GN++++ +   +LI                +  L PN  TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L++   K   V  A +LLD +++ G +PN + Y+ L+ G CK G+ + A   F  +  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G+ P+V +Y  L+  +  +GR + A ++L++M     +P +VTY  +I  L   G+++ 
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           ALK+L  M +    P+  +Y  +I  L   GK+DL +    QM  + C PN  TY  L  
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G + +A  ++  +  KQ   P+    Y             +  +L EM  YG  P
Sbjct: 628 HLCAAGLLDKARLLLGEM--KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVP 685

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEY--DYKPDVDNFNALLLGLCKSRRTDLSLE 503
            +  Y  LI      G +E A+E+   M E     K D D + +L+  LC + + + +  
Sbjct: 686 IAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 745

Query: 504 VFQMMIEKGQMPNETTYTILVEGI 527
           ++  M  +G +P  + +  L++G+
Sbjct: 746 LYSEMTRRGFVPELSVFVCLIKGL 769



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 231/525 (44%), Gaps = 60/525 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            ++A   L RM      P+VV    LL    K  ++    +++ MM++ G  P+ S +  
Sbjct: 123 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 182

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV----------------------- 175
           LV+  C + +  YA +L+ +M   G P   V YN  +                       
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 242

Query: 176 ------------------RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
                             R LC +G  +++ Q +  +++KG VP+  TYS ++       
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            V  A  L  ++   G  P++ +Y +L+   CK G  E+A   F ++ S G  P VV+Y 
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 278 ILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV- 335
            L+ +     +  +AN++   M D G R P  VTY  L+  L   G    A +V  +++ 
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCR-PNDVTYGALVDGLCKAGNISKAFEVYAKLIG 421

Query: 336 ---------------KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                          +    P+  +Y  ++  LC   KVD   + LD M    C+PN   
Sbjct: 422 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y+ L    C  GK+  A  +   +           Y  +I  + + G+   A ++L +M 
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           K   TP+  TY+++I GLC  G  E+AL++  +MEE    P+V  + AL+ GL K+ + D
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           LSL++F  M  KG  PN  TY +L+  +     L+ +  +L E++
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 227/489 (46%), Gaps = 56/489 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  AFL  + M   G  PDV   T L+   CKA  +++A  + E M S G  P   +YT
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI-- 195
            L++   K   V  A  +  +M D G   N VTY +LV GLC  GN++++ +   +LI  
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 196 --------------QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
                         +  L PN  TY  L++   K   V  A +LLD +++ G +PN + Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + L+ G CK G+ + A   F  +   G+ P+V +Y  L+  +  +GR + A ++L++M  
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P +VTY  +I  L   G+++ ALK+L  M +    P+  +Y  +I  L   GK+DL
Sbjct: 543 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 602

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP--------- 411
            +    QM  + C PN  TY  L   LC  G + +A  ++  +  KQ   P         
Sbjct: 603 SLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM--KQTYWPKYLQGYRCA 660

Query: 412 -QEFYKYVITSL-----------------------C--RKGKTYQAFQLLYEMTKY--GF 443
            Q F K  I SL                       C  + G+   A +L  EM +     
Sbjct: 661 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV 720

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D+  Y+SLI+ LC+   +EEA  ++  M    + P++  F  L+ GL + ++ D +L+
Sbjct: 721 KTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 780

Query: 504 VFQMMIEKG 512
           +   +  +G
Sbjct: 781 LCYGICHEG 789



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 210/474 (44%), Gaps = 26/474 (5%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G++P  V    L+  L  A ++    +V + M  SG   D  +     + LCK+G    A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + ++E+ ED+    +TV    ++ GL      ++++ FL R+     +PN  TY  LL  
Sbjct: 95  LDMIER-EDF--KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K++ +    ++++ ++ +G  PN   +N L+   C E     A +    + + G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 273 VVSYNILLRSLCMEGR------WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            V YNI + S+C + +       + A ++  EM   +     V        L   GK D 
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A +++ EM++  F P  ++Y+ +I  LC   KV+       +M      P+  TY  L  
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C  G +++A  + + + +   S     Y  +I +  +  +  QA  + + M   G  P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVM----------------EEYDYKPDVDNFNALL 489
           +  TY +L+ GLC  G I +A E++  +                + +   P+V  + AL+
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            GLCK+ + D + E+   M+  G  PN   Y  L++G     +++ + EV  ++
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 177/395 (44%), Gaps = 12/395 (3%)

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
           + ++D+GY  + VTYN+LV+ L   G ++   +    + + G   + FT      A  KE
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 217 -RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            R   A    LD I  +  K + V    +++GL +    +EA+ F   +      PNVV+
Sbjct: 89  GRWADA----LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  LL     + +      ++  M     +P    +N L+ S        +A K+L+ M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 336 KGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMFHRRCKPNEGTYNGLA-MLC 388
                P    YN  I  +C + K+      DL  K   +M    C  N+      A  LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
           GVGK  +AF +I+ +  K        Y  VIT LC   K  +AF L  EM   G TPD Y
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY+ LI   C  GLIE+A  +F  M      P V  + AL+    K+++   + ++F  M
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           ++ G  PN+ TY  LV+G+     +  + EV  +L
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 142/304 (46%), Gaps = 4/304 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + HK++ A   L+ M+S G +P+ +    L+   CKA K+  A +V   M   G +
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 511

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +YT L++ + K G +  AM+++ +M       N VTY +++ GLC +G   ++L+ 
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + +KG  PN  TY+ L++   K   +  ++ L   +  KG  PN V+Y VL+  LC 
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A     ++    +   +  Y   ++       +  +  +L EM+     P    
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPV 689

Query: 311 YNILIGSLAYHGKTDHALKVLDEM--VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           Y +LI   +  G+ + A+++  EM  V    +     Y  +I  LC   +V+   +   +
Sbjct: 690 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 749

Query: 369 MFHR 372
           M  R
Sbjct: 750 MTRR 753



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 35/260 (13%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L +M+     P+VV  T ++  LC+  + +KA+K++ +M   G  
Sbjct: 522 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 581

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC----------M 180
           P+  +YT L++ L K G +  ++ L  +M   G   N VTY  L+  LC          +
Sbjct: 582 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641

Query: 181 LGNLNQ-----------------------SLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           LG + Q                       SL  L+ +   G VP A  Y  L++   K  
Sbjct: 642 LGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAG 701

Query: 218 GVHAAMKLLDDI--IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            +  AM+L  ++  +    K +   Y  L+  LC   + EEA R + ++  +GF P +  
Sbjct: 702 RLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSV 761

Query: 276 YNILLRSLCMEGRWEEANEL 295
           +  L++ L    +W+EA +L
Sbjct: 762 FVCLIKGLVEVKKWDEALQL 781



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/351 (21%), Positives = 151/351 (43%), Gaps = 49/351 (13%)

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           L A+ +    HAA    D +   G +P+ V+YN L+  L   G+ +   R  +++   GF
Sbjct: 12  LRASLRRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGF 71

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
             +  +      +LC EGRW +A +++   D   +  T++  +++ G L      D A+ 
Sbjct: 72  CMDRFTVGCFAHALCKEGRWADALDMIEREDF--KLDTVLCTHMISG-LMEASYFDEAMS 128

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
            L  M      P+  +Y  +++    + ++    + ++ M    C PN   +N L     
Sbjct: 129 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL----- 183

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
                     + S  N+++      Y Y             A++LL  MT  G  P    
Sbjct: 184 ----------VHSYCNEKD------YAY-------------AYKLLNRMTTCGCPPGYVV 214

Query: 450 YSSLIRGLCME------GLIEEALEIFVVMEEYDY---KPDVDNFNALLLGLCKSRRTDL 500
           Y+  I  +C +       L++ A +I+  M   +    K +V NF   L G+ K    D 
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK---FDK 271

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           + ++ + M+ KG +P+ +TY+ ++  + H  ++E +  + +E+++  V  +
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 208/438 (47%), Gaps = 6/438 (1%)

Query: 117  AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
            A  V + M + G+ PD+ +Y Y++   C+ GNV  A + + +M + G+  +  T   ++ 
Sbjct: 815  AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 874

Query: 177  GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
              C    +N+++ F  ++ + GL PN   YS ++    K   V  A +LL++++  G KP
Sbjct: 875  AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 934

Query: 237  NLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
            N+ ++  L+ GLCK+G TE A R F  L  S  ++PNV +Y  ++   C E +   A  L
Sbjct: 935  NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEML 994

Query: 296  LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
               M      P   TY  LI      G    A ++++ M    F P+  +YN I+  LC 
Sbjct: 995  FERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCK 1054

Query: 356  EGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
             G+ +   K L+  F  + + +  TY  L +  C    + +A   +  +           
Sbjct: 1055 RGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHL 1114

Query: 415  YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
            Y  +I + CR+     + +L  E+ K G  P   TY+S+I G C E  +  A++ F  M 
Sbjct: 1115 YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMS 1174

Query: 475  EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            ++   PD  ++ AL+ GLCK  R D + +++  MI+KG  P E T   L       ++  
Sbjct: 1175 DHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFA 1234

Query: 535  LSAEVL----KELQLRQV 548
             +  +L    K+L +R V
Sbjct: 1235 SAMVILERLNKKLWIRTV 1252



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 224/453 (49%), Gaps = 3/453 (0%)

Query: 113  KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
            K+K+A+ ++  M + G++        ++    +   V YA  + ++M   G   ++ TY 
Sbjct: 776  KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYK 835

Query: 173  SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
             ++ G C  GN+ ++ +++  ++++G V +  T + ++ A  ++  V+ A+     +   
Sbjct: 836  YIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKM 895

Query: 233  GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
            G  PNL++Y+ +++GLCK G  ++A     ++   G++PNV ++  L+  LC +G  E A
Sbjct: 896  GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERA 955

Query: 293  NELLAEMDGGDR-SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
              L  ++   D   P + TY  +I       K   A  + + M +    P+  +Y  +I 
Sbjct: 956  FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLID 1015

Query: 352  RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
              C  G      + ++ M +    PN  TYN +   LC  G+ +EAF ++ +    Q  +
Sbjct: 1016 GHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEA 1075

Query: 411  PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
                Y  +I+  C++    QA   L +M K GF PD + Y++LI   C + +++++ ++F
Sbjct: 1076 DGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLF 1135

Query: 471  VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
              + +    P  + + +++ G C+ ++  L+++ FQ M + G  P+  +Y  L+ G+  +
Sbjct: 1136 DEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKE 1195

Query: 531  DELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
              L+  A  L +  + + +S   V R+ + Y++
Sbjct: 1196 SRLD-EARQLYDTMIDKGLSPCEVTRVTLTYEY 1227



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 193/434 (44%), Gaps = 38/434 (8%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            +N A     ++   G  P+++  ++++  LCK   +K+A +++E MV +G  P+  ++T 
Sbjct: 882  VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 941

Query: 139  LVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCKKG    A +L  K+     Y  N  TY +++ G C    L+++    +R+ ++
Sbjct: 942  LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 1001

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            GLVPN  TY+ L++   K      A +L++ +  +G  PN  +YN ++ GLCK GR EEA
Sbjct: 1002 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 1061

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             +          E + V+Y IL+   C      +A   L +M      P I  Y  LI +
Sbjct: 1062 FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 1121

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                     + K+ DE++K    P+  +Y  +I   C E KV L VK   +M    C P+
Sbjct: 1122 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 1181

Query: 378  EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
              +Y  L                                  I+ LC++ +  +A QL   
Sbjct: 1182 SISYGAL----------------------------------ISGLCKESRLDEARQLYDT 1207

Query: 438  MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
            M   G +P   T  +L    C     E+     V++E  + K  +   + L+  LC  ++
Sbjct: 1208 MIDKGLSPCEVTRVTLTYEYCK---TEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKK 1264

Query: 498  TDLSLEVFQMMIEK 511
              L+   F  +++K
Sbjct: 1265 VALAALFFHKLLDK 1278



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 40/341 (11%)

Query: 83   FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            FL+L R  S  +KP+V   T ++   CK  K+ +A  + E M   G++P+ ++YT L++ 
Sbjct: 959  FLKLIR--SDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDG 1016

Query: 143  LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG-------------------- 182
             CK GN   A +L+E M + G+  NT TYNS+V GLC  G                    
Sbjct: 1017 HCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD 1076

Query: 183  ---------------NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
                           ++NQ+L FL+++ + G  P+   Y+ L+ A  ++  +  + KL D
Sbjct: 1077 GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFD 1136

Query: 228  DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            ++I  G  P   +Y  ++ G C+E +   A++FF+ +   G  P+ +SY  L+  LC E 
Sbjct: 1137 EVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKES 1196

Query: 288  RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
            R +EA +L   M     SP  VT   L            A+ +L+ + K  +     + +
Sbjct: 1197 RLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLW---IRTVH 1253

Query: 348  PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
             +I +LC E KV L      ++  +    +  T       C
Sbjct: 1254 TLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTAC 1294


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 244/490 (49%), Gaps = 28/490 (5%)

Query: 94  HKPDVV---QATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           +K DV+   QA N++ D L K  +     KV   MV+ G  P+  +Y  L++  C++G+ 
Sbjct: 150 YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209

Query: 150 GYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
             A +L ++M E   +PT  V Y  L+RGLC    ++++      +   G++PN +TY+ 
Sbjct: 210 LKAFRLFDEMIEKKIFPT-VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNT 268

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +++   K   V  A++L  +++  G  PN+V++ +L+ GLCK      A +F  D+ S G
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN+  YN L+   C  G   EA  L +E++  +  P + TY+ILI  L    + + A 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            +L EM K  F P+A +YN +I   C EG ++  ++   QM  +  +PN  T++ L    
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK++ A  +   +  K        Y  +I    + G T +AF+L  EM + G  P+ 
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDY-------------KPDVDNFNALLLGLCK 494
           +T S LI GLC +G I +A+++F+     D               P+   + AL+ GLC 
Sbjct: 509 FTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCT 568

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEG----IAHQDELELSAEVLKELQLRQVVS 550
             R   + + F  M   G  P+  T  ++++G    +  +D + L A++LK      ++ 
Sbjct: 569 DGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILK----MGIIP 624

Query: 551 ESAVERLVMQ 560
            S+V R++ +
Sbjct: 625 NSSVYRVLAK 634



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 188/389 (48%), Gaps = 14/389 (3%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF   + M+ K   P VV  T L+  LC  +++ +A  +   M +SG++P+  +Y  +++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK  +V  A++L ++M   G   N VT+  L+ GLC    +  + +FL  +   G+VP
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N F Y+ L++   K   +  A+ L  +I      P++ +Y++L+ GLC   R EEA    
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +++  KGF PN V+YN L+   C EG  E+A E+ ++M      P I+T++ LI      
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           GK + A+ +  EMV     P   +Y  +I     +G      +   +M      PN  T 
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511

Query: 382 NGLA-MLCGVGKVQEAFAII------QSLGNKQN------SSPQE-FYKYVITSLCRKGK 427
           + L   LC  G++ +A  +        + G+K N       SP    Y  +I  LC  G+
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            ++A +   +M   G  PD +T   +I+G
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQG 600



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 22/211 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  +  A     +M  KG +P+++  + L+   CKA KM+ A+ +   MV  G++
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L++   K GN   A +L ++M++ G   N  T + L+ GLC  G ++ +++ 
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
                            FL +      G  +    LD  +     PN V Y  L+ GLC 
Sbjct: 531 -----------------FLAKTGTDTTG--SKTNELDRSLC---SPNHVMYTALIQGLCT 568

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           +GR  +A +FF D+   G  P+V +  ++++
Sbjct: 569 DGRIFKASKFFSDMRCSGLRPDVFTCIVIIQ 599



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 3/130 (2%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  +I +    G   +A  + Y+M      P     + ++ GL  +G  +   +++  M 
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
                P+V  +  L+ G C+      +  +F  MIEK   P    YTIL+ G+  +  + 
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 535 LSAEVLKELQ 544
            +  + + ++
Sbjct: 246 EAESMFRTMR 255


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 244/490 (49%), Gaps = 28/490 (5%)

Query: 94  HKPDVV---QATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           +K DV+   QA N++ D L K  +     KV   MV+ G  P+  +Y  L++  C++G+ 
Sbjct: 150 YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209

Query: 150 GYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
             A +L ++M E   +PT  V Y  L+RGLC    ++++      +   G++PN +TY+ 
Sbjct: 210 LKAFRLFDEMIEKKIFPT-VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNT 268

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +++   K   V  A++L  +++  G  PN+V++ +L+ GLCK      A +F  D+ S G
Sbjct: 269 MMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN+  YN L+   C  G   EA  L +E++  +  P + TY+ILI  L    + + A 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            +L EM K  F P+A +YN +I   C EG ++  ++   QM  +  +PN  T++ L    
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK++ A  +   +  K        Y  +I    + G T +AF+L  EM + G  P+ 
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDY-------------KPDVDNFNALLLGLCK 494
           +T S LI GLC +G I +A+++F+     D               P+   + AL+ GLC 
Sbjct: 509 FTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCT 568

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEG----IAHQDELELSAEVLKELQLRQVVS 550
             R   + + F  M   G  P+  T  ++++G    +  +D + L A++LK      ++ 
Sbjct: 569 DGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILK----MGIIP 624

Query: 551 ESAVERLVMQ 560
            S+V R++ +
Sbjct: 625 NSSVYRVLAK 634



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 187/389 (48%), Gaps = 14/389 (3%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF   + M+ K   P VV  T L+  LC  +++ +A  +   M +SG++P+  +Y  +++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK  +V  A++L  +M   G   N VT+  L+ GLC    +  + +FL  +   G+VP
Sbjct: 272 GYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N F Y+ L++   K   +  A+ L  +I      P++ +Y++L+ GLC   R EEA    
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +++  KGF PN V+YN L+   C EG  E+A E+ ++M      P I+T++ LI      
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           GK + A+ +  EMV     P   +Y  +I     +G      +   +M      PN  T 
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511

Query: 382 NGLA-MLCGVGKVQEAFAII------QSLGNKQNS------SPQE-FYKYVITSLCRKGK 427
           + L   LC  G++ +A  +        + G+K N       SP    Y  +I  LC  G+
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            ++A +   +M   G  PD +T   +I+G
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQG 600



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 189/410 (46%), Gaps = 22/410 (5%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + ++++A      M + G  P++     ++   CK   +KKA+++   M+  G++P+  +
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVT 300

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L++ LCK   +  A + +  M  +G   N   YN L+ G C  GNL+++L     + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +  ++P+ FTYS L++       +  A  LL ++  KG  PN V+YN L+ G CKEG  E
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +AI     +  KG EPN+++++ L+   C  G+ E A  L  EM      P +V Y  LI
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL--------- 366
                 G T  A ++  EM +    P+  + + +I  LC +G++   +K           
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTT 540

Query: 367 ----DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYV 418
               +++    C PN   Y  L   LC  G++ +A   F+ ++  G +    P  F   V
Sbjct: 541 GSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR----PDVFTCIV 596

Query: 419 IT-SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
           I     R         L  ++ K G  P+S  Y  L +G    G ++ AL
Sbjct: 597 IIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSAL 646



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 188/460 (40%), Gaps = 48/460 (10%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M  KG +P+++  + L+   CKA KM+ A+ +   MV  G++PD  +YT L++   K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N   A +L ++M++ G   N  T + L+ GLC  G ++ +++                  
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL----------------- 530

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           FL +      G  +    LD  +     PN V Y  L+ GLC +GR  +A +FF D+   
Sbjct: 531 FLAKTGTDTTG--SKTNELDRSLC---SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+V +  ++++         +   L A++      P    Y +L       G    A
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           L    E V+   R ++  +     R  S  ++ +V +       + C  +  T  G+   
Sbjct: 646 LSFCGEGVQPLDRVNSEPWGSYTIR--SRFQLCVVTE------KKECHSSYLTAFGI--- 694

Query: 388 CGVGKVQEAFAIIQSLGNK-QNSSPQEFYKYVITSLCRKG--KTYQAFQLLYEMTKYGFT 444
                   +F ++       +  SP E  K V   + +KG  +  +A QL  +M      
Sbjct: 695 -------HSFVLLWYFHTILKPPSPHEILKKV-PFIGQKGDQRPNKALQLFRQMQMDDXQ 746

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  T +  +      G ++    I   +       D+   N+L+    K      +  +
Sbjct: 747 PDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRL 806

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F    +  Q  + TT+T ++ G A   + E + ++  E++
Sbjct: 807 F----DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMK 842



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 102/499 (20%), Positives = 186/499 (37%), Gaps = 67/499 (13%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D    +AF   + M   G  P+V   + L+  LCK  ++  AIK+   +  +G  
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL--FLAKTGTD 538

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
              S    L   LC                      N V Y +L++GLC  G + ++ +F
Sbjct: 539 TTGSKTNELDRSLCSP--------------------NHVMYTALIQGLCTDGRIFKASKF 578

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   GL P+ FT   +++  ++   +   M L  DI+  G  PN   Y VL  G  +
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEE 638

Query: 251 EGRTEEAIRF----FRDLPSKGFEPNVVSYNILLR-SLCMEGRWEEANELLAEMDGGDRS 305
            G  + A+ F     + L     EP   SY I  R  LC+    +E +       G    
Sbjct: 639 SGYLKSALSFCGEGVQPLDRVNSEP-WGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSF 697

Query: 306 PTIVTYNILIGSLAYH--------------GKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
             +  ++ ++   + H               + + AL++  +M     +P   +    ++
Sbjct: 698 VLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALS 757

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
                G +D+       + HR    +    N L  M    G++  A  +      K  ++
Sbjct: 758 ACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTT 817

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG----------------FTPDSYTYSSLI 454
               +  +I      G+  +A QL  EM +                    P+  T+  ++
Sbjct: 818 ----WTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVL 873

Query: 455 RGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
                 GL+EE  + F  M E+Y  +P + +F  ++  LC   R  L  E ++ +++   
Sbjct: 874 MACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLC---RAGLLTEAYEFILKMPV 930

Query: 514 MPNETTYTILVEGIAHQDE 532
            PN   +  L+   + Q +
Sbjct: 931 RPNAVVWRTLLGACSLQGD 949



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 3/130 (2%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  +I +    G   +A  + Y+M      P     + ++ GL  +G  +   +++  M 
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
                P+V  +  L+ G C+      +  +F  MIEK   P    YTIL+ G+  +  + 
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 535 LSAEVLKELQ 544
            +  + + ++
Sbjct: 246 EAESMFRTMR 255


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 224/472 (47%), Gaps = 19/472 (4%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+S G   + V   +    LC   K +KA KV+  M+ +G +PD S+Y+ ++  LC    
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASR 504

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A  L ++M+  G   +  TY  L+      G + Q+  +LD +++ G  P   TY+ 
Sbjct: 505 VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTT 564

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF------R 262
           L+ A  K + V  A +L + +IAKG  PN+++Y  L+ G CK G  E+A + +       
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDA 624

Query: 263 DLPSKGF----------EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           D+P              +PNVV+Y  L+  LC   + ++A +LL  M      P  + Y+
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYD 684

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI       K D A +V  +MV+  + P+  +Y+ +I RL  + ++DLV+K L +M   
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 744

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C PN   Y  +   L  V K  EA+ ++  +  K        Y  +I    + GK  + 
Sbjct: 745 SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKC 804

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L  EM   G  P+  TY+ LI   C  G ++EA  +   M++  +   V ++  ++ G
Sbjct: 805 LELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEG 864

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
               R   LSL + + + + G  P    Y +L++       LE++ E+ KE+
Sbjct: 865 Y--KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEV 914



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 225/509 (44%), Gaps = 66/509 (12%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   A+  +  M+  G  PD    + ++  LC A++++ A  + + M  +G++PD  +YT
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 138 YLVNCLCKKG-----------------------------------NVGYAMQLVEKMEDY 162
            L++C  K G                                    V  A +L E M   
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL--------------IQKGLV--PNAFTY 206
           G   N +TY +L+ G C  GN+ ++ Q   R+              I+  +   PN  TY
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L++   K   V  A  LL+ +   G +PN + Y+ L+ G CK  + +EA   F  +  
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G+ PNV +Y+ L+  L  + R +   ++L++M     +P IV Y  +I  L+   KTD 
Sbjct: 709 RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A K++  M +   +P+  +Y  +I      GKVD  ++   +M  + C PN  TY  L  
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ-----AFQLLYEMTK 440
             C  G + EA+A+++ +  KQ   P+      ++S C+  + Y+     +  LL E+ K
Sbjct: 829 HCCATGHLDEAYALLEEM--KQTYWPKH-----VSSYCKVIEGYKREFILSLGLLEEVEK 881

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            G  P    Y  LI      G +E ALE+   V+          + + +L+     + + 
Sbjct: 882 NGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKI 941

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           D + E+F  MI  G +P+  T+  L+ G+
Sbjct: 942 DHAFELFYDMIRDGVIPDLGTFVHLLMGL 970



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 213/479 (44%), Gaps = 52/479 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +AF   + M   G  PDV   T L+    KA  +K+A   ++ MV  G  P   +YT
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL--- 194
            L++   K   V  A +L E M   G   N +TY +L+ G C  GN+ ++ Q   R+   
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623

Query: 195 -----------IQKGLV--PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
                      I+  +   PN  TY  L++   K   V  A  LL+ +   G +PN + Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + L+ G CK  + +EA   F  +  +G+ PNV +Y+ L+  L  + R +   ++L++M  
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P IV Y  +I  L+   KTD A K++  M +   +P+  +Y  +I      GKVD 
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDK 803

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ------------------- 401
            ++   +M  + C PN  TY  L    C  G + EA+A+++                   
Sbjct: 804 CLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIE 863

Query: 402 --------SLG-----NKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEM--TKYGFTP 445
                   SLG      K  S+P    YK +I +  + G+   A +L  E+       T 
Sbjct: 864 GYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTA 923

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
               Y+SLI        I+ A E+F  M      PD+  F  LL+GL + RR + +L++
Sbjct: 924 KKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 224/557 (40%), Gaps = 105/557 (18%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   N A  +L R+   G+KP  +    L+    +A+K+  A  V   M   G+  D  
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +  +    LCK G    A+ L+EK ED+    NT+ YN ++ GLC      +++ FL+R+
Sbjct: 278 TLGFFAQALCKVGKWREALSLIEK-EDF--VPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TY  LL     ++ +    ++L  +IA+G  P+   +N L+   CK    
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL---------------------------------- 280
             A +  + +     +P  V YNIL+                                  
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454

Query: 281 -------RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL----- 328
                  R LC  G++E+A +++ EM G    P   TY+ +IG L    + ++A      
Sbjct: 455 VNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 329 ------------------------------KVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
                                           LDEMV+    P+  +Y  +I       K
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA-------------------FA 398
           V +  +  + M  + C PN  TY  L    C  G +++A                   F 
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           I  ++  K N      Y  ++  LC+  K   A  LL  M   G  P++  Y +LI G C
Sbjct: 635 IKNNVAEKPNVVT---YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
               ++EA E+F  M E  Y P+V  +++L+  L K +R DL L+V   M+E    PN  
Sbjct: 692 KAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751

Query: 519 TYTILVEG---IAHQDE 532
            YT +++G   +A  DE
Sbjct: 752 IYTEMIDGLSKVAKTDE 768



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 190/415 (45%), Gaps = 14/415 (3%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C+ G    A++ + +++D+GY    +TYN+LV+       L+ +      + + G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLL--DDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           L  + FT  F  +A  K      A+ L+  +D +     PN + YN +++GLC+    EE
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV-----PNTILYNKMISGLCEASFFEE 326

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+ F   + S    PNV +Y ILL     + +      +L+ M      P+   +N L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMF 370
           +        +A K+L +M K   +P    YN +I  +CS G++      +L  K  ++M 
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 N+      A  LCG GK ++A+ +I  +           Y  VI  LC   +  
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF L  EM   G  PD YTY+ LI      G+I++A      M     +P V  +  L+
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLI 566

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               K+++  ++ E+F++MI KG  PN  TYT L++G      +E + ++   ++
Sbjct: 567 HAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 167/356 (46%), Gaps = 12/356 (3%)

Query: 55  KDSVYTKPNRKP-GNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK 113
           K++V  KPN    G   D   + HK+ DA   LE M   G +P+ +    L+   CKA K
Sbjct: 636 KNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAK 695

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           + +A +V   MV  G  P+  +Y+ L++ L K   +   ++++ KM +     N V Y  
Sbjct: 696 LDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           ++ GL  +   +++ + +  + +KG  PN  TY+ +++   K   V   ++L  ++ +KG
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE-- 291
             PN V+Y VL+   C  G  +EA     ++    +  +V SY  ++     EG   E  
Sbjct: 816 CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVI-----EGYKREFI 870

Query: 292 -ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS--YNP 348
            +  LL E++    +PTI+ Y +LI +    G+ + AL++  E++      +A    Y  
Sbjct: 871 LSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTS 930

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSL 403
           +I       K+D   +    M      P+ GT+  L M L  V + +EA  +  SL
Sbjct: 931 LIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 37/251 (14%)

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           E L E+ G D+       N+LI     +G  + AL+ L  +    ++P+  +YN ++   
Sbjct: 192 EFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVF 251

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
               K+D       Q+ HR     E +  GL+M        + F    +LG         
Sbjct: 252 LRADKLDTA-----QLVHR-----EMSELGLSM--------DEF----TLG--------- 280

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
              +   +LC+ GK  +A  L+    K  F P++  Y+ +I GLC     EEA++    M
Sbjct: 281 ---FFAQALCKVGKWREALSLI---EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
                 P+V  +  LL G    ++      +  MMI +G  P+ T +  LV      D+ 
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 534 ELSAEVLKELQ 544
             + ++LK+++
Sbjct: 395 SYAYKLLKKME 405



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 130/343 (37%), Gaps = 78/343 (22%)

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N+L+R  C  G W  A E L  +      PT +TYN L+       K D A  V  EM +
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 337 --------------------GRFR------------PSAASYNPIIARLCSEGKVDLVVK 364
                               G++R            P+   YN +I+ LC     +  + 
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMD 329

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCG------VGKVQE------------AFAIIQSLGNK 406
            L++M    C PN  TY    +LCG      +G+ +             ++ I  SL + 
Sbjct: 330 FLNRMRSTSCIPNVQTYR--ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387

Query: 407 QNSSPQEFYKY--------------------VITSLCRKGK-----TYQAFQLLY-EMTK 440
              S    Y Y                    +I S+C  G+     T++  +  Y EM  
Sbjct: 388 YCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLS 447

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G   +     S  R LC  G  E+A ++   M    + PD   ++ ++  LC + R + 
Sbjct: 448 AGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVEN 507

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +  +F+ M   G +P+  TYTIL++  +    ++ +   L E+
Sbjct: 508 AFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEM 550


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 186/359 (51%), Gaps = 1/359 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M ++G  P+V   + L+  LC+  K+ +A +++  M+  G  P+  +Y  L++ LCK G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+ L  +M   G P + V YN L+ G    G++ ++ +  + +++KG +P  FTY+ 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL    ++        L  D++ +G  PN+ ++N LL G CK G   EA R F ++ S G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+VVSYN L+R +C +G+  EA  LL EM      P IV+YNILI   +  G  DHA+
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           K+  E+ K    P A SY+ II  LC  GKV         M      P+      L + L
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           C   ++ E+  + Q++   +       Y  ++  LC+  ++    ++ +E+T+ GF+PD
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 204/412 (49%), Gaps = 4/412 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M++ G  P+      LL  LC+A + ++A  V   M + G  P+  SY+ L+  LC+   
Sbjct: 43  MLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A +L+ +M D G+  N VTY SL+ GLC +G L +++    R++ +G  P+   Y+ 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K+  +  A +L ++++ KG  P + +YN LL+G  ++G        F+D+  +G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN+ ++N LL   C  G   EA+ L  EM      P +V+YN LI  +   GK   A 
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQ 282

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++L EM++    P   SYN +I      G +D  +K   ++     +P+  +Y+ +   L
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GKV  AF + + +    ++        ++  LCR  +  ++ +L   M K+   P  
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLI 402

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             Y+ L+  LC     ++  EIF  + E  + PDV+    +L  L   RR+D
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL---RRSD 451



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 199/427 (46%), Gaps = 1/427 (0%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY YL+  L K G   +       M   G   NT TY  L+R LC      ++      +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G  PN F+YS L+    + + V  A +LL+++I  G +PN+V+Y  LL+GLCK G+ 
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+  F  +  +G  P+ V YN+L+     +G   EA  L  EM      PT+ TYN L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+      +  +M++    P+  ++N ++   C  G +    +   +M    C
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  +YN L   +C  GK  EA  +++ +           Y  +I    + G    A +
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L YE+ K G  PD+++YS++I  LC  G +  A  +F  M      PD      L++GLC
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +  R   S E+FQ M++   +P    Y +L+  +      +   E+  EL  R    +  
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438

Query: 554 VERLVMQ 560
           + +++++
Sbjct: 439 ISKVILE 445



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 198/431 (45%), Gaps = 3/431 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LL  L K+ +          M+++G +P+  +Y YL+  LC+      A  +   M   G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  +Y+ L+ GLC    ++++ + L+ +I  G  PN  TY  LL    K   +  A+
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L   ++ +G  P+ V YNVL+ G  K+G   EA R F ++  KG  P V +YN LL   
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             +G +     L  +M      P I T+N L+      G    A ++  EM      P  
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            SYN +I  +CS+GK     + L +M      P+  +YN L       G +  A  +   
Sbjct: 263 VSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 403 LGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           +  K    P  F Y  +I  LCR GK   AF +  +M   G  PD+     L+ GLC   
Sbjct: 323 I-PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGE 381

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            + E+ E+F  M +++  P +  +N L+  LCK++R+D   E+F  + E+G  P+     
Sbjct: 382 RLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISK 441

Query: 522 ILVEGIAHQDE 532
           +++E +   D+
Sbjct: 442 VILETLRRSDD 452



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 193/384 (50%), Gaps = 7/384 (1%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           Y   T++YN L+  L   G  +      + ++  G VPN +TY +LL +  + +    A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            +   + A+G  PN+ SY++L+ GLC+  + +EA     ++   G +PNVV+Y  LL  L
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G+ +EA +L + M      P  V YN+LI   +  G    A ++ +EM++    P+ 
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAI 399
            +YN +++    +G+   V      M  + C PN  T+N L    C +G + EA   F  
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           ++SLG   +      Y  +I  +C KGK ++A +LL EM + G  PD  +Y+ LI G   
Sbjct: 253 MRSLGCPPDVVS---YNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G ++ A+++F  + +   +PD  +++ ++  LC++ +   +  VF+ MI  G  P+   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
              LV G+   + L  S E+ + +
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAM 393



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 170/351 (48%), Gaps = 1/351 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+++A   L  M+  GH+P+VV   +LL  LCK  K+K+A+ +   MV  G  PD  
Sbjct: 99  RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV 158

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++   KKG++G A +L E+M + G      TYNSL+ G    G   +       +
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G VPN FT++ LL+   K   +  A +L  ++ + G  P++VSYN L+ G+C +G+ 
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKP 278

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA R  R++   G  P++VSYNIL+      G  + A +L  E+      P   +Y+ +
Sbjct: 279 HEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTI 338

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   GK   A  V  +M+     P AA   P++  LC   ++    +    M    C
Sbjct: 339 IDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFEC 398

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
            P    YN L   LC   +  +   I   L  +  S   E  K ++ +L R
Sbjct: 399 VPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 115/239 (48%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G  P++    NLL   CK   M +A ++   M S G  PD  SY  L+  +C KG 
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGK 277

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A +L+ +M   G   + V+YN L+ G    G L+ +++    + + GL P+AF+YS 
Sbjct: 278 PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYST 337

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +++   +   V AA  +  D+IA G  P+      L+ GLC+  R  E+   F+ +    
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
             P +  YN+L+  LC   R ++  E+  E+     SP +    +++ +L      D A
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 63/152 (41%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L+ A      +   G +PD    + ++  LC+A K+  A  V + M+++G  
Sbjct: 305 DGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PDA+    LV  LC+   +  + +L + M  +        YN L+  LC     +   + 
Sbjct: 365 PDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEI 424

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
              L ++G  P+      +LE   +     AA
Sbjct: 425 FHELTERGFSPDVEISKVILETLRRSDDKDAA 456


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 186/359 (51%), Gaps = 1/359 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M ++G  P+V   + L+  LC+  K+ +A +++  M+  G  P+  +Y  L++ LCK G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+ L  +M   G P + V YN L+ G    G++ ++ +  + +++KG +P  FTY+ 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL    ++        L  D++ +G  PN+ ++N LL G CK G   EA R F ++ S G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+VVSYN L+R +C +G+  EA  LL EM      P IV+YNILI   +  G  DHA+
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           K+  E+ K    P A SY+ II  LC  GKV         M      P+      L + L
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           C   ++ E+  + Q++   +       Y  ++  LC+  ++    ++ +E+T+ GF+PD
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 4/412 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G  P+      LL  LC+A + ++A  V   M + G  P+  SY+ L+  LC+   
Sbjct: 43  MLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A +L+ +M D G+  N VTY SL+ GLC +G L +++    R++ +G  P+   Y+ 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K+  +  A +L ++++ KG  P + +YN LL+G  ++G        F+D+  +G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN+ ++N LL   C  G   EA+ L  EM      P +V+YN L+  +   GK   A 
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           ++L EM++    P   SYN +I      G +D  +K   ++     +P+  +Y+ +   L
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GKV  AF + + +    ++        ++  LCR  +  ++ +L   M K+   P  
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLI 402

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             Y+ L+  LC     ++  EIF  + E  + PDV+    +L  L   RR+D
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL---RRSD 451



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 199/427 (46%), Gaps = 1/427 (0%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY YL+  L K G   +       M   G   NT TY  L+R LC      ++      +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G  PN F+YS L+    + + V  A +LL+++I  G +PN+V+Y  LL+GLCK G+ 
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+  F  +  +G  P+ V YN+L+     +G   EA  L  EM      PT+ TYN L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+      +  +M++    P+  ++N ++   C  G +    +   +M    C
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  +YN L   +C  GK  EA  +++ +           Y  +I    + G    A +
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L YE+ K G  PD+++YS++I  LC  G +  A  +F  M      PD      L++GLC
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +  R   S E+FQ M++   +P    Y +L+  +      +   E+  EL  R    +  
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438

Query: 554 VERLVMQ 560
           + +++++
Sbjct: 439 ISKVILE 445



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 198/433 (45%), Gaps = 3/433 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LL  L K+ +          M+ +G +P+  +Y YL+  LC+      A  +   M   G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  +Y+ L+ GLC    ++++ + L+ +I  G  PN  TY  LL    K   +  A+
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L   ++ +G  P+ V YNVL+ G  K+G   EA R F ++  KG  P V +YN LL   
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             +G +     L  +M      P I T+N L+      G    A ++  EM      P  
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            SYN ++  +CS+GK     + L +M      P+  +YN L       G +  A  +   
Sbjct: 263 VSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 403 LGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
           +  K    P  F Y  +I  LCR GK   AF +  +M   G  PD+     L+ GLC   
Sbjct: 323 I-PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGE 381

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            + E+ E+F  M +++  P +  +N L+  LCK++R+D   E+F  + E+G  P+     
Sbjct: 382 RLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISK 441

Query: 522 ILVEGIAHQDELE 534
           +++E +   D+ E
Sbjct: 442 VILETLRRSDDKE 454



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 193/384 (50%), Gaps = 7/384 (1%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           Y   T++YN L+  L   G  +      + ++  G VPN +TY +LL +  + +    A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            +   + A+G  PN+ SY++L+ GLC+  + +EA     ++   G +PNVV+Y  LL  L
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G+ +EA +L + M      P  V YN+LI   +  G    A ++ +EM++    P+ 
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAI 399
            +YN +++    +G+   V      M  + C PN  T+N L    C +G + EA   F  
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           ++SLG   +      Y  ++  +C KGK ++A +LL EM + G  PD  +Y+ LI G   
Sbjct: 253 MRSLGCPPDVVS---YNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G ++ A+++F  + +   +PD  +++ ++  LC++ +   +  VF+ MI  G  P+   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
              LV G+   + L  S E+ + +
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAM 393



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 170/351 (48%), Gaps = 1/351 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+++A   L  M+  GH+P+VV   +LL  LCK  K+K+A+ +   MV  G  PD  
Sbjct: 99  RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV 158

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++   KKG++G A +L E+M + G      TYNSL+ G    G   +       +
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G VPN FT++ LL+   K   +  A +L  ++ + G  P++VSYN L+ G+C +G+ 
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKP 278

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA R  R++   G  P++VSYNIL+      G  + A +L  E+      P   +Y+ +
Sbjct: 279 HEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTI 338

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   GK   A  V  +M+     P AA   P++  LC   ++    +    M    C
Sbjct: 339 IDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFEC 398

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
            P    YN L   LC   +  +   I   L  +  S   E  K ++ +L R
Sbjct: 399 VPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 213/462 (46%), Gaps = 19/462 (4%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           V   N    LC   K  KA ++++ M+  G +PD S+Y+ ++  LC    V  A  L ++
Sbjct: 189 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 248

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+  G   +  TY  L+   C  G + Q+    + +   G  P   TY+ L+ A  K + 
Sbjct: 249 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 308

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG---------- 268
           V  A  +   ++  G +PN V+Y  L+ GLCK G   +A   +  L              
Sbjct: 309 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 368

Query: 269 ------FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
                   PNVV+Y  L+  LC   + + A+ELL  M      P  + Y+ LI      G
Sbjct: 369 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 428

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A +V  +M K  + PS  +Y  +I R+  +G++DL +K L QM    C PN  TY 
Sbjct: 429 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 488

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +   LC +G+ ++A  ++  +  K  S     Y  +I  L + GK   +  L  +M++ 
Sbjct: 489 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 548

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G +P+  TY  LI  LC  GL+++A  +   M++  +   +  +   + G  KS     S
Sbjct: 549 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--S 606

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L + + M   G +P    Y +L++  +    LE++ E+ KE+
Sbjct: 607 LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 648



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 229/504 (45%), Gaps = 56/504 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K + AF  ++ M+ KG  PD    + ++  LC A K++KA  + + M   G+ PD  +YT
Sbjct: 203 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 262

Query: 138 YLVNCLCKKGNVGYAMQLVEKME-----------------------------------DY 162
            L++  CK G +  A  L E+M                                    D 
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI----------------QKGLVPNAFTY 206
           G   N VTY +LV GLC  GN++++ +   +LI                +  L PN  TY
Sbjct: 323 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L++   K   V  A +LLD +++ G +PN + Y+ L+ G CK G+ + A   F  +  
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G+ P+V +Y  L+  +  +GR + A ++L++M     +P +VTY  +I  L   G+++ 
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           ALK+L  M +    P+  +Y  +I  L   GK+DL +    QM  + C PN  TY  L  
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 562

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G + +A  ++  +  KQ   P+    Y             +  +L EM  YG  P
Sbjct: 563 HLCAAGLLDKARLLLGEM--KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVP 620

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEY--DYKPDVDNFNALLLGLCKSRRTDLSLE 503
            +  Y  LI      G +E A+E+   M E     K D D + +L+  LC + + + +  
Sbjct: 621 IAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFR 680

Query: 504 VFQMMIEKGQMPNETTYTILVEGI 527
           ++  M  +G +P  + +  L++G+
Sbjct: 681 LYSEMTRRGFVPELSVFVCLIKGL 704



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 231/525 (44%), Gaps = 60/525 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            ++A   L RM      P+VV    LL    K  ++    +++ MM++ G  P+ S +  
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV----------------------- 175
           LV+  C + +  YA +L+ +M   G P   V YN  +                       
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 176 ------------------RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
                             R LC +G  +++ Q +  +++KG VP+  TYS ++       
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            V  A  L  ++   G  P++ +Y +L+   CK G  E+A   F ++ S G  P VV+Y 
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 278 ILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV- 335
            L+ +     +  +AN++   M D G R P  VTY  L+  L   G    A +V  +++ 
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCR-PNDVTYGALVDGLCKAGNISKAFEVYAKLIG 356

Query: 336 ---------------KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                          +    P+  +Y  ++  LC   KVD   + LD M    C+PN   
Sbjct: 357 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 416

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y+ L    C  GK+  A  +   +           Y  +I  + + G+   A ++L +M 
Sbjct: 417 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 476

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           K   TP+  TY+++I GLC  G  E+AL++  +MEE    P+V  + AL+ GL K+ + D
Sbjct: 477 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 536

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           LSL++F  M  KG  PN  TY +L+  +     L+ +  +L E++
Sbjct: 537 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 581



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 227/489 (46%), Gaps = 56/489 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  AFL  + M   G  PDV   T L+   CKA  +++A  + E M S G  P   +YT
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI-- 195
            L++   K   V  A  +  +M D G   N VTY +LV GLC  GN++++ +   +LI  
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 196 --------------QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
                         +  L PN  TY  L++   K   V  A +LLD +++ G +PN + Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + L+ G CK G+ + A   F  +   G+ P+V +Y  L+  +  +GR + A ++L++M  
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P +VTY  +I  L   G+++ ALK+L  M +    P+  +Y  +I  L   GK+DL
Sbjct: 478 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 537

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP--------- 411
            +    QM  + C PN  TY  L   LC  G + +A  ++  +  KQ   P         
Sbjct: 538 SLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM--KQTYWPKYLQGYRCA 595

Query: 412 -QEFYKYVITSL-----------------------C--RKGKTYQAFQLLYEMTKY--GF 443
            Q F K  I SL                       C  + G+   A +L  EM +     
Sbjct: 596 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV 655

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D+  Y+SLI+ LC+   +EEA  ++  M    + P++  F  L+ GL + ++ D +L+
Sbjct: 656 KTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 715

Query: 504 VFQMMIEKG 512
           +   +  +G
Sbjct: 716 LCYGICHEG 724



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 196/443 (44%), Gaps = 26/443 (5%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M  SG   D  +     + LCK+G    A+ ++E+ ED+    +TV    ++ GL     
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIER-EDF--KLDTVLCTHMISGLMEASY 57

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            ++++ FL R+     +PN  TY  LL    K++ +    ++++ ++ +G  PN   +N 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR------WEEANELLA 297
           L+   C E     A +    + + G  P  V YNI + S+C + +       + A ++  
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           EM   +     V        L   GK D A +++ EM++  F P  ++Y+ +I  LC   
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           KV+       +M      P+  TY  L    C  G +++A  + + + +   S     Y 
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM--- 473
            +I +  +  +  QA  + + M   G  P+  TY +L+ GLC  G I +A E++  +   
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 474 -------------EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
                        + +   P+V  + AL+ GLCK+ + D + E+   M+  G  PN   Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
             L++G     +++ + EV  ++
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQM 440



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 4/308 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + HK++ A   L+ M+S G +P+ +    L+   CKA K+  A +V   M   G +
Sbjct: 387 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 446

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +YT L++ + K G +  AM+++ +M       N VTY +++ GLC +G   ++L+ 
Sbjct: 447 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 506

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + +KG  PN  TY+ L++   K   +  ++ L   +  KG  PN V+Y VL+  LC 
Sbjct: 507 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 566

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  ++A     ++    +   +  Y   ++       +  +  +L EM+     P    
Sbjct: 567 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPV 624

Query: 311 YNILIGSLAYHGKTDHALKVLDEM--VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           Y +LI   +  G+ + A+++  EM  V    +     Y  +I  LC   +V+   +   +
Sbjct: 625 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 684

Query: 369 MFHRRCKP 376
           M  R   P
Sbjct: 685 MTRRGFVP 692



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 35/260 (13%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L +M+     P+VV  T ++  LC+  + +KA+K++ +M   G  
Sbjct: 457 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 516

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC----------M 180
           P+  +YT L++ L K G +  ++ L  +M   G   N VTY  L+  LC          +
Sbjct: 517 PNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 576

Query: 181 LGNLNQ-----------------------SLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           LG + Q                       SL  L+ +   G VP A  Y  L++   K  
Sbjct: 577 LGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAG 636

Query: 218 GVHAAMKLLDDI--IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            +  AM+L  ++  +    K +   Y  L+  LC   + EEA R + ++  +GF P +  
Sbjct: 637 RLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSV 696

Query: 276 YNILLRSLCMEGRWEEANEL 295
           +  L++ L    +W+EA +L
Sbjct: 697 FVCLIKGLVEVKKWDEALQL 716



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/288 (19%), Positives = 118/288 (40%), Gaps = 10/288 (3%)

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   GF  +  +      +LC EGRW +A +++   D   +  T++  +++ G L     
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF--KLDTVLCTHMISG-LMEASY 57

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+  L  M      P+  +Y  +++    + ++    + ++ M    C PN   +N 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ------AFQLLY 436
           L    C       A+ ++  +           Y   I S+C + K         A ++  
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM       +    ++  R LC  G  ++A ++   M    + PD   ++ ++  LC + 
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + + +  +FQ M   G  P+  TYTIL++       +E +  + +E++
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 285


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/467 (30%), Positives = 227/467 (48%), Gaps = 7/467 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+  G   D    T  +   C++  +  A  ++  M S G+   A  Y  L+  LCK
Sbjct: 186 FDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCK 245

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A+++   M + G   + VTY +LV G C +  L  +L+    +I+ G VP+   
Sbjct: 246 NMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            SF+++   K+  V  A  L   +   G  PN+ +YN L+  LCK  R ++A R F+++ 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G EPN V+Y IL+ +LC  G  E+A  L  +M       T+  YN LI      G  D
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L  MVK    P+AASY+P+IA LC  G +   ++   +M  R    N  T+  L 
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 485

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C   K+ EA  +   + +  N  P E  +  +I   C  G   +AFQL  +M + G 
Sbjct: 486 NGFCKDKKMDEAARLFDKMID-SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN--ALLLGLCKSRRTDLS 501
            PD+YTY SLI GLC+   + +A E FV   E  Y   ++NF+  ALL G  +  R   +
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANE-FVADLENSYAV-LNNFSLTALLYGFFREGRFTET 602

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             ++  M  +G   +  ++TI+V     Q + E S  + +E++ + V
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 212/444 (47%), Gaps = 2/444 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MV +G  P     + L+  LC+   +   +++   M   GI  +  ++T L+N  CK
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A +L +KM D     N VT+N ++ G C++GN+ ++ Q  D++++ GL P+ +T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+       GV  A + + D+       N  S   LL G  +EGR  E    + ++ 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 610

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G + ++VS+ I++ +   +   E++  L  EM      P  + Y  +I +L+      
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            AL   D+MV   + P+  ++  +I  LC  G +        +M      PN+ TYN  L
Sbjct: 671 QALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 730

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                 G +++A  +  ++     +S   F   +I  LC+ GK  +A  L+ ++T+ GF+
Sbjct: 731 DYFATEGDMEKAKDLHSAMLQGHLASIVSF-NILIKGLCKAGKIQEAIDLMSKITESGFS 789

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  +YS++I  LC  G I +A E++  M     KPDV  +N  +        +D +L +
Sbjct: 790 PDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGI 849

Query: 505 FQMMIEKGQMPNETTYTILVEGIA 528
           +  MI  G  PN  TY  L+ GI+
Sbjct: 850 YTNMIRSGVQPNWDTYRALLSGIS 873



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/508 (22%), Positives = 222/508 (43%), Gaps = 35/508 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   + +AF    ++   G  P+V     L+  LCK  +   A ++ + M   G+ 
Sbjct: 311 DELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLE 370

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++ LCK+G +  A+ L +KM D G       YNSL+ G C  G+L+++   
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++++GL P A +YS L+    +   + + M+L  ++  +G   N  ++  L+ G CK
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           + + +EA R F  +      PN V++N+++   C+ G   +A +L  +M      P   T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI  L        A + + ++       +  S   ++     EG+        D+M 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 610

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTY 429
            R  K +  ++  +         +E   ++     +Q   P + FY  +I +L ++    
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG-------LIEEALEIFVVMEEYDYKPDV 482
           QA     +M   G++P++ T++ LI  LC  G       L +E L   V+  ++ Y   +
Sbjct: 671 QALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 730

Query: 483 D---------------------------NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           D                           +FN L+ GLCK+ +   ++++   + E G  P
Sbjct: 731 DYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSP 790

Query: 516 NETTYTILVEGIAHQDELELSAEVLKEL 543
           +  +Y+ ++  +    ++  + E+  E+
Sbjct: 791 DCISYSTIIHELCKMGDINKAFELWNEM 818



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 1/277 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +  + +   + M  +G K D+V  T ++Y   K +  +K+  +   M   G+ PD  
Sbjct: 595 REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT +++ L K+ N+  A+   ++M   GY  NTVT+  L+  LC  G L  +      +
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   ++PN FTY+  L+    E  +  A K L   + +G   ++VS+N+L+ GLCK G+ 
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKI 773

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI     +   GF P+ +SY+ ++  LC  G   +A EL  EM      P +V YNI 
Sbjct: 774 QEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIF 833

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           I     HG++D AL +   M++   +P+  +Y  +++
Sbjct: 834 IRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 115/215 (53%), Gaps = 1/215 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  +  A    ++MV  G+ P+ V  T L+ +LCK+  +  A  + + M++  ++
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y   ++    +G++  A  L   M   G+  + V++N L++GLC  G + +++  
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDL 779

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + ++ + G  P+  +YS ++    K   ++ A +L ++++ KG KP++V+YN+ +     
Sbjct: 780 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            G +++A+  + ++   G +PN  +Y  LL  + +
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 49/104 (47%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   + ++   G  PD +  + ++++LCK   + KA ++   M+  G+ PD  +Y 
Sbjct: 772 KIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 831

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
             +      G    A+ +   M   G   N  TY +L+ G+ ++
Sbjct: 832 IFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/467 (30%), Positives = 227/467 (48%), Gaps = 7/467 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+  G   D    T  +   C++  +  A  ++  M S G+   A  Y  L+  LCK
Sbjct: 209 FDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCK 268

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A+++   M + G   + VTY +LV G C +  L  +L+    +I+ G VP+   
Sbjct: 269 NMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 328

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            SF+++   K+  V  A  L   +   G  PN+ +YN L+  LCK  R ++A R F+++ 
Sbjct: 329 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 388

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G EPN V+Y IL+ +LC  G  E+A  L  +M       T+  YN LI      G  D
Sbjct: 389 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 448

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L  MVK    P+AASY+P+IA LC  G +   ++   +M  R    N  T+  L 
Sbjct: 449 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 508

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C   K+ EA  +   + +  N  P E  +  +I   C  G   +AFQL  +M + G 
Sbjct: 509 NGFCKDKKMDEAARLFDKMID-SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 567

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN--ALLLGLCKSRRTDLS 501
            PD+YTY SLI GLC+   + +A E FV   E  Y   ++NF+  ALL G  +  R   +
Sbjct: 568 KPDNYTYRSLISGLCLTSGVSKANE-FVADLENSYAV-LNNFSLTALLYGFFREGRFTET 625

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             ++  M  +G   +  ++TI+V     Q + E S  + +E++ + V
Sbjct: 626 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 672



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 212/444 (47%), Gaps = 2/444 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MV +G  P     + L+  LC+   +   +++   M   GI  +  ++T L+N  CK
Sbjct: 454 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 513

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A +L +KM D     N VT+N ++ G C++GN+ ++ Q  D++++ GL P+ +T
Sbjct: 514 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 573

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+       GV  A + + D+       N  S   LL G  +EGR  E    + ++ 
Sbjct: 574 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 633

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G + ++VS+ I++ +   +   E++  L  EM      P  + Y  +I +L+      
Sbjct: 634 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 693

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            AL   D+MV   + P+  ++  +I  LC  G +        +M      PN+ TYN  L
Sbjct: 694 QALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 753

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                 G +++A  +  ++     +S   F   +I  LC+ GK  +A  L+ ++T+ GF+
Sbjct: 754 DYFATEGDMEKAKDLHSAMLQGHLASIVSF-NILIKGLCKAGKIQEAIDLMSKITESGFS 812

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  +YS++I  LC  G I +A E++  M     KPDV  +N  +        +D +L +
Sbjct: 813 PDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGI 872

Query: 505 FQMMIEKGQMPNETTYTILVEGIA 528
           +  MI  G  PN  TY  L+ GI+
Sbjct: 873 YTNMIRSGVQPNWDTYRALLSGIS 896



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/508 (22%), Positives = 222/508 (43%), Gaps = 35/508 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   + +AF    ++   G  P+V     L+  LCK  +   A ++ + M   G+ 
Sbjct: 334 DELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLE 393

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++ LCK+G +  A+ L +KM D G       YNSL+ G C  G+L+++   
Sbjct: 394 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 453

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++++GL P A +YS L+    +   + + M+L  ++  +G   N  ++  L+ G CK
Sbjct: 454 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 513

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           + + +EA R F  +      PN V++N+++   C+ G   +A +L  +M      P   T
Sbjct: 514 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 573

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI  L        A + + ++       +  S   ++     EG+        D+M 
Sbjct: 574 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 633

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTY 429
            R  K +  ++  +         +E   ++     +Q   P + FY  +I +L ++    
Sbjct: 634 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 693

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG-------LIEEALEIFVVMEEYDYKPDV 482
           QA     +M   G++P++ T++ LI  LC  G       L +E L   V+  ++ Y   +
Sbjct: 694 QALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 753

Query: 483 D---------------------------NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           D                           +FN L+ GLCK+ +   ++++   + E G  P
Sbjct: 754 DYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSP 813

Query: 516 NETTYTILVEGIAHQDELELSAEVLKEL 543
           +  +Y+ ++  +    ++  + E+  E+
Sbjct: 814 DCISYSTIIHELCKMGDINKAFELWNEM 841



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 149/291 (51%), Gaps = 4/291 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +  + +   + M  +G K D+V  T ++Y   K +  +K+  +   M   G+ PD  
Sbjct: 618 REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 677

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT +++ L K+ N+  A+   ++M   GY  NTVT+  L+  LC  G L  +      +
Sbjct: 678 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 737

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   ++PN FTY+  L+    E  +  A K L   + +G   ++VS+N+L+ GLCK G+ 
Sbjct: 738 LAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKI 796

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI     +   GF P+ +SY+ ++  LC  G   +A EL  EM      P +V YNI 
Sbjct: 797 QEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIF 856

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI---IARLCSEGKVDLV 362
           I     HG++D AL +   M++   +P+  +Y  +   I+ + S+G+  L+
Sbjct: 857 IRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQALLL 907



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 115/215 (53%), Gaps = 1/215 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  +  A    ++MV  G+ P+ V  T L+ +LCK+  +  A  + + M++  ++
Sbjct: 684 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 743

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y   ++    +G++  A  L   M   G+  + V++N L++GLC  G + +++  
Sbjct: 744 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDL 802

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + ++ + G  P+  +YS ++    K   ++ A +L ++++ KG KP++V+YN+ +     
Sbjct: 803 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 862

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            G +++A+  + ++   G +PN  +Y  LL  + +
Sbjct: 863 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 897


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 226/470 (48%), Gaps = 12/470 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYL 139
           DAFL+L    ++G  P +     L+  L    ++  A KV  EM   + + PD  +YT +
Sbjct: 166 DAFLELS---TRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVM 222

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LC+ G +  A  ++ ++E  G     VTYN L+  LC  G + ++ Q   R+++  L
Sbjct: 223 IKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRL 282

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  T+  L+    + +       +L ++   G  PN V YN L+   C+EG   EA+R
Sbjct: 283 RPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALR 342

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F ++ SKG +  VV+YN++ ++LC EG  E A ++L EM     +     +N ++   A
Sbjct: 343 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV---A 399

Query: 320 YH----GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           +H    G+ D  L+++ EMV    +P+ A     I  LC  GK +   +    +  +   
Sbjct: 400 WHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLG 459

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            N  T N L   LC    ++EA  +++++ +      +  Y  +I   C+  K  +A QL
Sbjct: 460 VNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQL 519

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M K GF PD +T+++ +R  C  G +E+ L +   M+    KPD+  +  ++ G CK
Sbjct: 520 RDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCK 579

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++    + +    +I+ G  PN   Y  L+ G      +  +  VL  ++
Sbjct: 580 AKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMK 629



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 226/476 (47%), Gaps = 2/476 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +++ AF+ L  +   G +P VV    L+  LC++ ++++A ++   MV   + P   
Sbjct: 228 RAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIV 287

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N L +    G    ++++ME +G   N V YN L+   C  G+ +++L+  D +
Sbjct: 288 TFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEM 347

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN-VLLTGLCKEGR 253
           + KG+     TY+ + +A  KE  +  A ++LD+++  G   +   +N V+   L   GR
Sbjct: 348 VSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGR 407

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +  +R  R++ ++  +PN       ++ LC  G+ EEA E+   + G      I T N 
Sbjct: 408 LDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNA 467

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L        A KVL  MV         +YN +I   C   K++  ++  D M  R 
Sbjct: 468 LIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG 527

Query: 374 CKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            KP+  T+N  L   C +GKV++   ++  + ++        Y  +I   C+    ++A 
Sbjct: 528 FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKAN 587

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           + L E+ K G  P++  Y++LI G    G I +A+ +   M+    +P    +N+L+  +
Sbjct: 588 KYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWM 647

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           C +   + + E+F   I K        YTI+++G     +++ +    KE+  R +
Sbjct: 648 CHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDI 703



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 218/462 (47%), Gaps = 14/462 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  ++ +AF    RMV    +P +V    L+  L +  +  +   V++ M   GI 
Sbjct: 259 DALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGIT 318

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  L+   C++G+   A++L ++M   G     VTYN + + LC  G +  + Q 
Sbjct: 319 PNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQI 378

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERG---VHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           LD ++  G+  +   ++ ++  A+  RG   +   ++L+ +++A+  KPN       +  
Sbjct: 379 LDEMLLAGMTVHCSLFNSVV--AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQE 436

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGG---D 303
           LCK G+ EEA   +  +  KG   N+ + N L+  LC     +EA ++L  M D G   D
Sbjct: 437 LCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFD 496

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
           R    +TYNI+I       K + A+++ D+M+K  F+P   ++N  +   C+ GKV+ ++
Sbjct: 497 R----ITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDIL 552

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
             LDQM     KP+  TY  +    C    V +A   +  L           Y  +I   
Sbjct: 553 HLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGY 612

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
            R G    A  +L  M   G  P   TY+SL+  +C  GL+EEA EIF      + +  V
Sbjct: 613 GRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGV 672

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
             +  ++ G CK  + D ++  F+ M  +   PN+ TYT L+
Sbjct: 673 IGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLM 714



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 199/431 (46%), Gaps = 2/431 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   ++A    + MVSKG K  VV    +   LCK  +M+ A ++++ M+ +G+    S
Sbjct: 333 REGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCS 392

Query: 135 SYTYLVNC-LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +  +V   L   G +   ++L+ +M       N     + ++ LC  G   ++ +    
Sbjct: 393 LFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFL 452

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ KGL  N  T + L+    +   +  A K+L  ++  G + + ++YN+++   CK  +
Sbjct: 453 VLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASK 512

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEAI+   D+  +GF+P++ ++N  LR+ C  G+ E+   LL +M      P IVTY  
Sbjct: 513 MEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGT 572

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I           A K L E++K   RP+A  YN +I      G +   +  LD M H  
Sbjct: 573 IIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNG 632

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            +P   TYN L   +C  G V+EA  I      K        Y  +I   C+ GK  +A 
Sbjct: 633 IQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAV 692

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
               EM      P+  TY++L+   C  G  EEA ++F  M      PD  ++N L+ G 
Sbjct: 693 MYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGC 752

Query: 493 CKSRRTDLSLE 503
           C+    D  +E
Sbjct: 753 CEVDSLDKIVE 763



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 148/293 (50%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           + + +A   L+ MV  G + D +    ++   CKA+KM++AI++ + M+  G  PD  ++
Sbjct: 476 NNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTF 535

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              +   C  G V   + L+++M+  G   + VTY +++ G C   +++++ ++L  LI+
Sbjct: 536 NTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIK 595

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            GL PNA  Y+ L+    +   +  A+ +LD +   G +P  ++YN L+  +C  G  EE
Sbjct: 596 NGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEE 655

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F     K  E  V+ Y I+++  C  G+ +EA     EM   D  P  +TY  L+ 
Sbjct: 656 AKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMY 715

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +    G  + A K+ DEMV     P   SYN +I+  C    +D +V+   +M
Sbjct: 716 AYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 3/277 (1%)

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAAS 345
           G    A +   E+     SP+I T NIL+ +L   G+ D A KV  EM  G    P   +
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
           Y  +I  LC  G++D     L ++     +P   TYN L   LC  G+V+EAF +   + 
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
             +       +  +I  L R  +  +   +L EM  +G TP+   Y+ LI   C EG   
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY-TIL 523
           EAL +F  M     K  V  +N +   LCK    + + ++   M+  G   + + + +++
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 524 VEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
              +     L++   +++E+  R +    AV    +Q
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQ 435


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/467 (30%), Positives = 227/467 (48%), Gaps = 7/467 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M+  G   D    T  +   C++  +  A  ++  M S G+   A  Y  L+  LCK
Sbjct: 186 FDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCK 245

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A+++   M + G   + VTY +LV G C +  L  +L+    +I+ G VP+   
Sbjct: 246 NMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            SF+++   K+  V  A  L   +   G  PN+ +YN L+  LCK  R ++A R F+++ 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G EPN V+Y IL+ +LC  G  E+A  L  +M       T+  YN LI      G  D
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +L  MVK    P+AASY+P+IA LC  G +   ++   +M  R    N  T+  L 
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 485

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C   K+ EA  +   + +  N  P E  +  +I   C  G   +AFQL  +M + G 
Sbjct: 486 NGFCKDKKMDEAARLFDKMID-SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN--ALLLGLCKSRRTDLS 501
            PD+YTY SLI GLC+   + +A E FV   E  Y   ++NF+  ALL G  +  R   +
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANE-FVADLENSYAV-LNNFSLTALLYGFFREGRFTET 602

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             ++  M  +G   +  ++TI+V     Q + E S  + +E++ + V
Sbjct: 603 YHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 212/444 (47%), Gaps = 2/444 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MV +G  P     + L+  LC+   +   +++   M   GI  +  ++T L+N  CK
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A +L +KM D     N VT+N ++ G C++GN+ ++ Q  D++++ GL P+ +T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+       GV  A + + D+       N  S   LL G  +EGR  E    + ++ 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 610

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G + ++VS+ I++ +   +   E++  L  EM      P  + Y  +I +L+      
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            AL   D+MV   + P+  ++  +I  LC  G +        +M      PN+ TYN  L
Sbjct: 671 QALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 730

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                 G +++A  +  ++     +S   F   +I  LC+ GK  +A  L+ ++T+ GF+
Sbjct: 731 DYFATEGDMEKAKDLHSAMLQGHLASIVSF-NILIKGLCKAGKIQEAIDLMSKITESGFS 789

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  +YS++I  LC  G I +A E++  M     KPDV  +N  +        +D +L +
Sbjct: 790 PDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGI 849

Query: 505 FQMMIEKGQMPNETTYTILVEGIA 528
           +  MI  G  PN  TY  L+ GI+
Sbjct: 850 YTNMIRSGVQPNWDTYRALLSGIS 873



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/508 (22%), Positives = 222/508 (43%), Gaps = 35/508 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   + +AF    ++   G  P+V     L+  LCK  +   A ++ + M   G+ 
Sbjct: 311 DELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLE 370

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++ LCK+G +  A+ L +KM D G       YNSL+ G C  G+L+++   
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++++GL P A +YS L+    +   + + M+L  ++  +G   N  ++  L+ G CK
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           + + +EA R F  +      PN V++N+++   C+ G   +A +L  +M      P   T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI  L        A + + ++       +  S   ++     EG+        D+M 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 610

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTY 429
            R  K +  ++  +         +E   ++     +Q   P + FY  +I +L ++    
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG-------LIEEALEIFVVMEEYDYKPDV 482
           QA     +M   G++P++ T++ LI  LC  G       L +E L   V+  ++ Y   +
Sbjct: 671 QALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 730

Query: 483 D---------------------------NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           D                           +FN L+ GLCK+ +   ++++   + E G  P
Sbjct: 731 DYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSP 790

Query: 516 NETTYTILVEGIAHQDELELSAEVLKEL 543
           +  +Y+ ++  +    ++  + E+  E+
Sbjct: 791 DCISYSTIIHELCKMGDINKAFELWNEM 818



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 1/277 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +  + +   + M  +G K D+V  T ++Y   K +  +K+  +   M   G+ PD  
Sbjct: 595 REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT +++ L K+ N+  A+   ++M   GY  NTVT+  L+  LC  G L  +      +
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   ++PN FTY+  L+    E  +  A K L   + +G   ++VS+N+L+ GLCK G+ 
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKI 773

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI     +   GF P+ +SY+ ++  LC  G   +A EL  EM      P +V YNI 
Sbjct: 774 QEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIF 833

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           I     HG++D AL +   M++   +P+  +Y  +++
Sbjct: 834 IRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 115/215 (53%), Gaps = 1/215 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  +  A    ++MV  G+ P+ V  T L+ +LCK+  +  A  + + M++  ++
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y   ++    +G++  A  L   M   G+  + V++N L++GLC  G + +++  
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDL 779

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + ++ + G  P+  +YS ++    K   ++ A +L ++++ KG KP++V+YN+ +     
Sbjct: 780 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            G +++A+  + ++   G +PN  +Y  LL  + +
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISL 874



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 49/104 (47%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   + ++   G  PD +  + ++++LCK   + KA ++   M+  G+ PD  +Y 
Sbjct: 772 KIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 831

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
             +      G    A+ +   M   G   N  TY +L+ G+ ++
Sbjct: 832 IFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 226/455 (49%), Gaps = 7/455 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +++ A   L  M  KG  PD V  T ++  +C+  K+++A + + M + S  +P   
Sbjct: 190 KNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA-RELSMRIKS-FVP--- 244

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+N  C++  +    +L  +M   G   + +TY++++  L  +GN+  +L  L ++
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKM 304

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G  PN  T++ L++  +    +  A+ L + +I +G +PN V+YN L+ GLC  G+ 
Sbjct: 305 FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM 364

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA+   + +   G  PN  +Y+ L+      G    A+E+  +M      P +V Y  +
Sbjct: 365 VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCM 424

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  +   +HAL +++ M  G   P+  ++N  I  LC  GK +  +K L+QM    C
Sbjct: 425 VDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGC 484

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN  L  L    + +EA  I+  +   +  S    Y  +++  C  G    A Q
Sbjct: 485 APNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQ 544

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNALLLGL 492
           +  ++   G  PDS TY+++I   C +G ++ A+++   + ++ +  PDV  + +LL G+
Sbjct: 545 IAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGV 604

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           C     D ++     MI +G  PN  T+  LV G+
Sbjct: 605 CNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 207/455 (45%), Gaps = 39/455 (8%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G + +V     LL  LCK +++  A K++  M   G IPDA SYT +V+ +C+ G 
Sbjct: 169 MKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGK 228

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A +L  +++ +        YN+L+ G C    + +  +  + +  +G+ P+  TYS 
Sbjct: 229 VEEARELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYST 283

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++    +   V  A+ +L  +  +G  PN+ ++  L+ G    GR  EA+  +  +  +G
Sbjct: 284 VINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEG 343

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            EPN V+YN L+  LC  G+  EA  +  +M+     P   TY+ LI   A  G    A 
Sbjct: 344 SEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGAS 403

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
           ++ ++M+     P+   Y  ++  LC     +  +  ++ M +  C PN  T+N      
Sbjct: 404 EIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTF---- 459

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                                         I  LC  GKT  A ++L +M +YG  P+  
Sbjct: 460 ------------------------------IKGLCCSGKTEWAMKVLNQMRQYGCAPNVT 489

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY+ ++ GL       EAL+I   +EE + K ++  +N +L G C +     +L++   +
Sbjct: 490 TYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKL 549

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +  G  P+  TY  ++     Q E++ + +++  L
Sbjct: 550 LVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRL 584



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 201/432 (46%), Gaps = 6/432 (1%)

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
           ++++M   GI  +   +  ++N   + G    A++   ++ ++G   +   YN ++  L 
Sbjct: 95  LLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALL 154

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
                       + + + G+  N +TY+ LL+A  K   V AA KLL ++  KG  P+ V
Sbjct: 155 SENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAV 214

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           SY  +++ +C+ G+ EEA      +  K F P    YN L+   C E + EE  EL  EM
Sbjct: 215 SYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNALINGFCREHKMEEVFELFNEM 269

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P ++TY+ +I +L+  G  + AL VL +M      P+  ++  ++      G++
Sbjct: 270 AVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRL 329

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
              +   ++M     +PN   YN L   LC  GK+ EA ++ Q +        +  Y  +
Sbjct: 330 CEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTL 389

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I    + G    A ++  +M   G  P+   Y+ ++  LC   +   AL +   M   + 
Sbjct: 390 IDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNC 449

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P+   FN  + GLC S +T+ +++V   M + G  PN TTY  +++G+ +      + +
Sbjct: 450 PPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQ 509

Query: 539 VLKELQLRQVVS 550
           ++ E++  ++ S
Sbjct: 510 IVGEIEEMEIKS 521



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 155/315 (49%), Gaps = 36/315 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM------------- 124
           +L +A     RM+ +G +P+ V    L++ LC   KM +A+ V + M             
Sbjct: 328 RLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYS 387

Query: 125 ----------------------VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
                                 +++G +P+   YT +V+ LC+     +A+ L+E M + 
Sbjct: 388 TLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANG 447

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
             P NT+T+N+ ++GLC  G    +++ L+++ Q G  PN  TY+ +L+  +  +    A
Sbjct: 448 NCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREA 507

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           ++++ +I     K NLV+YN +L+G C  G  + A++    L   G +P+ ++YN ++ +
Sbjct: 508 LQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYA 567

Query: 283 LCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            C +G  + A +L+  +   G+  P + TY  L+  +      D A+  LD+M+     P
Sbjct: 568 YCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICP 627

Query: 342 SAASYNPIIARLCSE 356
           + A++N ++  L S+
Sbjct: 628 NRATWNALVRGLFSK 642



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 164/341 (48%), Gaps = 6/341 (1%)

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ +++    ER +     LL  +  +G   N   + +++    + G  E+A++ F  
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   G +P+V  YN +L +L  E +++  N +   M        + TYN+L+ +L  + +
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A K+L EM      P A SY  +++ +C  GKV+       +    R K     YN 
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA-----RELSMRIKSFVPVYNA 248

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L    C   K++E F +   +  +        Y  VI +L   G    A  +L +M   G
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            +P+ +T++SL++G  M G + EAL+++  M +   +P+   +N L+ GLC   +   ++
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAV 368

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            V Q M   G  PNETTY+ L++G A   +L  ++E+  ++
Sbjct: 369 SVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM 409



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 111/214 (51%), Gaps = 1/214 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+   N A   +E M +    P+ +     +  LC + K + A+KV+  M   G  
Sbjct: 426 DVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCA 485

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+ ++Y  +++ L        A+Q+V ++E+    +N VTYN+++ G C  G    +LQ 
Sbjct: 486 PNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQI 545

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG-GKPNLVSYNVLLTGLC 249
             +L+  G  P++ TY+ ++ A  K+  V  A++L+D +  KG G P++ +Y  LL G+C
Sbjct: 546 AGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVC 605

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                +EA+     + ++G  PN  ++N L+R L
Sbjct: 606 NWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 81/141 (57%), Gaps = 3/141 (2%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           K ++V    +L   C A   K A+++   ++  G  PD+ +Y  ++   CK+G V  A+Q
Sbjct: 520 KSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQ 579

Query: 155 LVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           LV+++  +  GYP +  TY SL+ G+C    +++++  LD++I +G+ PN  T++ L+  
Sbjct: 580 LVDRLTKKGEGYP-DVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRG 638

Query: 213 AYKERGVHAAMKLLDDIIAKG 233
            + + G    + ++D+I+A G
Sbjct: 639 LFSKLGHLGPIHIVDNILANG 659



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 55/120 (45%)

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  M   G + +   +  +I      GL E+AL+ F  + E+  KP V  +N +L  L 
Sbjct: 95  LLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALL 154

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
              +  +   ++  M   G   N  TY +L++ +   D ++ + ++L E+  +  + ++ 
Sbjct: 155 SENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAV 214


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 209/411 (50%), Gaps = 3/411 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A   L+ M +KG + +    T+++  LC   ++  A++V+E M   G+  DA  +T
Sbjct: 302 ELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFT 361

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  C KG++  A +L E+M+  G   + VT+ +L+ GLC  G L ++ + L  ++ K
Sbjct: 362 TVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDK 421

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +  TY+ L++   K   +  A ++ ++++ +   PN+V+Y  L  GLCK+G    A
Sbjct: 422 GLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAA 481

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ +KG E NV +YN L+  LC  G  E+A  ++ EM+       + TY  LI +
Sbjct: 482 NELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDT 541

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D A  +L EM+    +PS A+YN ++   C  G+V+   K L+ M  +  +PN
Sbjct: 542 LCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPN 601

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLY 436
             TYN L     + K  ++   I    + Q  +P E  Y  +I   C+     +A     
Sbjct: 602 VVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQ 661

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM--EEYDYKPDVDNF 485
           EM + G    + +YS+LIR L  +    EA   F  M  E    +PDV +F
Sbjct: 662 EMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 225/486 (46%), Gaps = 37/486 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA    + M S    PDVV    +++  C   +++ A+K+++ M + G+  +A+ YT
Sbjct: 270 RLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYT 326

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC KG V  A++++E M  +G   + V + +++ G C  G+L  + +  + + ++
Sbjct: 327 SVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKR 386

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +  T++ L+    +   +  A ++L +++ KG   ++V+Y VL+ G CK G   EA
Sbjct: 387 GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEA 446

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R   ++  +   PNVV+Y  L   LC +G    ANELL EM        + TYN LI  
Sbjct: 447 FRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLING 506

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A++++ EM     R    +Y  +I  LC  G+ D     L +M  +  KP+
Sbjct: 507 LCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  +   C  G+     +LL  
Sbjct: 567 IATYNVL----------------------------------MNGFCMSGRVEGGKKLLEW 592

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M +    P+  TY+SL++  C++  ++   EI+  M   +  P+ + +N L+ G CK+R 
Sbjct: 593 MLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARN 652

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +L   Q MIEKG     ++Y+ L+  +  + +   +     +++   + +E  V   
Sbjct: 653 MKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712

Query: 558 VMQYDF 563
            M   F
Sbjct: 713 YMDISF 718



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 200/400 (50%), Gaps = 6/400 (1%)

Query: 130 IPDAS--SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           +PD +  S+  L+  L   G +  A Q  ++M     P + VTY ++V G C+ G L  +
Sbjct: 250 LPDKNVCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENA 306

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           ++ LD +  KGL  NA  Y+ ++     +  V  A+++L+D+   G   + V +  +++G
Sbjct: 307 VKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISG 366

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            C +G    A R F ++  +G   + V++  L+  LC  G  +EA+ +L EM        
Sbjct: 367 FCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVD 426

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           +VTY +LI      G    A +V +EMV  R  P+  +Y  +   LC +G V    + L 
Sbjct: 427 VVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLH 486

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M ++  + N  TYN L   LC  G +++A  I+  +    + +    Y  +I +LC+ G
Sbjct: 487 EMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG 546

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  +L EM   G  P   TY+ L+ G CM G +E   ++   M E + +P+V  +N
Sbjct: 547 EFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYN 606

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           +L+   C  +    + E+++ M  +   PNE TY IL++G
Sbjct: 607 SLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKG 646



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 177/385 (45%), Gaps = 6/385 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG-VHAAMKL 225
           N  ++N L++ L   G L  + Q  D +      P+  TY  ++   Y  RG +  A+KL
Sbjct: 254 NVCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHG-YCVRGELENAVKL 309

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           LD++ AKG + N   Y  ++  LC +G+  +A+R   D+   G   + V +  ++   C 
Sbjct: 310 LDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCS 369

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +G    A  L  EM     +   VT+  LI  L   G+   A +VL EMV         +
Sbjct: 370 KGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVT 429

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
           Y  +I   C  G +    +  ++M  RR  PN  TY  L+  LC  G V+ A  ++  + 
Sbjct: 430 YTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMC 489

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           NK        Y  +I  LC+ G   QA +++ EM   G   D YTY++LI  LC  G  +
Sbjct: 490 NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFD 549

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            A  +   M +   KP +  +N L+ G C S R +   ++ + M+EK   PN  TY  L+
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLM 609

Query: 525 EGIAHQDELELSAEVLKELQLRQVV 549
           +       ++ + E+ K +  ++V 
Sbjct: 610 KQYCIDKNMKSTTEIYKGMHSQEVA 634



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 151/295 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L +A   L+ MV KG   DVV  T L+   CK   M +A +V   MV   + P+  
Sbjct: 404 RAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVV 463

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L + LCK+G+V  A +L+ +M + G   N  TYNSL+ GLC  GNL Q+++ +  +
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G   + +TY+ L++   K      A  +L +++ KG KP++ +YNVL+ G C  GR 
Sbjct: 524 EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E   +    +  K   PNVV+YN L++  C++   +   E+   M   + +P   TYNIL
Sbjct: 584 EGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNIL 643

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           I           AL    EM++   R +A+SY+ +I  L  + K        D+M
Sbjct: 644 IKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKM 698



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 12/358 (3%)

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           S + L RL Q GL P+  + + +L     +  +    +L D         N+ S+N+LL 
Sbjct: 212 SAELLRRLRQYGLSPSPESCNAVLSRLPLDEAIALFRELPDK--------NVCSHNILLK 263

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            L   GR ++A + F ++ S    P+VV+Y  ++   C+ G  E A +LL EM       
Sbjct: 264 ALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES 320

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
               Y  +I  L   G+   AL+VL++M        A  +  +I+  CS+G +    +  
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLF 380

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           ++M  R    +  T+  L   LC  G+++EA  ++Q + +K        Y  +I   C++
Sbjct: 381 EEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKR 440

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +AF++  EM      P+  TY++L  GLC +G +  A E+   M     + +V  +
Sbjct: 441 GNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTY 500

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           N+L+ GLCK    + ++ +   M   G   +  TYT L++ +    E + +  +L+E+
Sbjct: 501 NSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM 558



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 74/145 (51%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M+ K  +P+VV   +L+   C    MK   ++ + M S  + P+ ++Y  L+   CK
Sbjct: 590 LEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCK 649

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             N+  A+   ++M + G      +Y++L+R L      +++  F D++  +GL      
Sbjct: 650 ARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDV 709

Query: 206 YSFLLEAAYKERGVHAAMKLLDDII 230
           YSF ++ ++ E  + + + L D+++
Sbjct: 710 YSFYMDISFNEDNLESTITLCDELV 734


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 232/512 (45%), Gaps = 38/512 (7%)

Query: 87  ERMVSKGHKPDVVQATNLLYDL-CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            +MV+    P  V+  NLL+ +  K      AI +++ M   G+ P+ S++  ++NCLC+
Sbjct: 15  HKMVTMKPFP-CVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCR 73

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             +  +   ++  M   G   + VT+ ++V GLC+ GN+ Q+++F+D L   G   + +T
Sbjct: 74  LNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYT 133

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
              ++    K     AA+  L  +  +    ++ +Y+ ++ GLCK+G   EA+  F  + 
Sbjct: 134 RGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMT 193

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG +PN+ +YN L+  LC   RW+EA  LLA M      P + T+N++ G     G   
Sbjct: 194 GKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMIS 253

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +   M       +  +YN II   C   ++   ++  D M  + C PN  TYN L 
Sbjct: 254 RAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLI 313

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C    + +A   +  + N         +  +I   C+ GK   A +L + M K+G  
Sbjct: 314 HGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQL 373

Query: 445 PDSYT-----------------------------------YSSLIRGLCMEGLIEEALEI 469
           PD  T                                   YS ++ G+C  G + +ALE+
Sbjct: 374 PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALEL 433

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  +     K DV  +N ++ GLCK    D + ++   M E G  P+E TY + V+G+  
Sbjct: 434 FSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLR 493

Query: 530 QDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           + E+  S + L  ++ +   + +   +L++ Y
Sbjct: 494 RYEISKSTKYLMFMKGKGFRANATTTKLLINY 525



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 210/455 (46%), Gaps = 7/455 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            F  L  M   G +P +V  T ++  LC    + +AI+ ++ +   G   D  +   ++N
Sbjct: 80  GFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIIN 139

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G+   A+  ++KME+     +   Y+++V GLC  G + ++L    ++  KG+ P
Sbjct: 140 GLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQP 199

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N FTY+ L+           A  LL +++ KG  P++ ++NV+     K G    A   F
Sbjct: 200 NLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIF 259

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G E NVV+YN ++ + CM  + ++A E+   M      P IVTYN LI      
Sbjct: 260 SFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCET 319

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-PNEGT 380
              + A+  L EMV     P   +++ +I   C  GK  +  K L  + H+  + P+  T
Sbjct: 320 KNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGK-PVAAKELFFVMHKHGQLPDLQT 378

Query: 381 YNGLAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                +L G+ K     EA ++ + L    +      Y  ++  +C  GK   A +L   
Sbjct: 379 C--AIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 436

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           ++  G   D  TY+ +I GLC EGL+++A ++ + MEE    PD   +N  + GL +   
Sbjct: 437 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 496

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
              S +    M  KG   N TT  +L+   +   E
Sbjct: 497 ISKSTKYLMFMKGKGFRANATTTKLLINYFSANKE 531



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 154/312 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  + +A     +M  KG +P++     L++ LC  ++ K+A  ++  M+  GI+
Sbjct: 174 DGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIM 233

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  +     K G +  A  +   M   G   N VTYNS++   CML  +  +++ 
Sbjct: 234 PDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEV 293

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I+KG +PN  TY+ L+    + + ++ AM  L +++  G  P++V+++ L+ G CK
Sbjct: 294 FDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCK 353

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+   A   F  +   G  P++ +  I+L  L       EA  L  E++  +    I+ 
Sbjct: 354 AGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIII 413

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+I++  +   GK + AL++   +     +    +YN +I  LC EG +D     L +M 
Sbjct: 414 YSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKME 473

Query: 371 HRRCKPNEGTYN 382
              C P+E TYN
Sbjct: 474 ENGCPPDECTYN 485



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/347 (21%), Positives = 155/347 (44%), Gaps = 1/347 (0%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           +++ +L F  +++     P    ++ L     K +    A+ L+  +   G KPN+ ++N
Sbjct: 6   SVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHN 65

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           +++  LC+   T         +   G EP++V++  ++  LC+EG   +A   +  +   
Sbjct: 66  IVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDM 125

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
                  T   +I  L   G +  AL  L +M +        +Y+ ++  LC +G V   
Sbjct: 126 GYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEA 185

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
           +    QM  +  +PN  TYN L   LC   + +EA  ++ ++  K      + +  +   
Sbjct: 186 LDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGR 245

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
             + G   +A  +   M   G   +  TY+S+I   CM   +++A+E+F +M      P+
Sbjct: 246 FLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPN 305

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +  +N+L+ G C+++  + ++     M+  G  P+  T++ L+ G  
Sbjct: 306 IVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFC 352



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 137/329 (41%), Gaps = 3/329 (0%)

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
           + V  A+     ++     P +  +N+L   + K      AI   + +   G +PNV ++
Sbjct: 5   KSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTH 64

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           NI++  LC          +L  M      P+IVT+  ++  L   G    A++ +D +  
Sbjct: 65  NIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKD 124

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQE 395
             +     +   II  LC  G     +  L +M  + C  +   Y+ +   LC  G V E
Sbjct: 125 MGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFE 184

Query: 396 AFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           A  +   +  K    P  F Y  +I  LC   +  +A  LL  M + G  PD  T++ + 
Sbjct: 185 ALDLFSQMTGK-GIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 243

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
                 G+I  A  IF  M     + +V  +N+++   C   +   ++EVF +MI KG +
Sbjct: 244 GRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCL 303

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
           PN  TY  L+ G      +  +   L E+
Sbjct: 304 PNIVTYNSLIHGWCETKNMNKAMYFLGEM 332


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 213/441 (48%), Gaps = 4/441 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM--VSSGIIPDASSYTYLVNCLCKK 146
           M+  G +P +     LL   CKA +M +A+ +++ M   ++G +P+  +Y  ++N L +K
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A QLV+ M       +  TYN L+ GL     + ++   L  +  +G+VP   TY
Sbjct: 280 GELEKAAQLVDIMR-LSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTY 338

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L++  +K     AA    D++ AKG  P+L++YN L+ G CK G  ++A+  F DL  
Sbjct: 339 NTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKR 398

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P V++YNIL+   C  G  E A  L  EM   D  P + TY IL+           
Sbjct: 399 AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAM 458

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
                DEM+     P   +YN  I+   + G +    +  ++M  R    +  TYN L  
Sbjct: 459 VRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLID 518

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G +++A+ +   +           Y  +I + C +G+  +A  +   M   G +P
Sbjct: 519 GLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSP 578

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
              TY+  I   C  G +  A   F  M E   +P+   +N L+  LC+  RT+ + + F
Sbjct: 579 SVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHF 638

Query: 506 QMMIEKGQMPNETTYTILVEG 526
             M+E+G +PN+ TYT+L++G
Sbjct: 639 HEMLERGLVPNKYTYTLLIDG 659



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 216/469 (46%), Gaps = 8/469 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M   G  P V +   +L  L  A +      V   M+  G+ P   +Y  L++  CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 146 KGNVGYAMQLVEKMED--YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD--RLIQKGLVP 201
            G +  A+ L++ ME    G   N VTYN ++ GL   G L ++ Q +D  RL +K    
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA--- 298

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +AFTY+ L+        V  A  LL ++  +G  P +V+YN L+ GL K G  E A   F
Sbjct: 299 SAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKF 358

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++ +KG  P++++YN L+   C  G  ++A  L  ++      PT++TYNILI      
Sbjct: 359 DEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRL 418

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G  + A ++ +EM +    P   +Y  ++   C    + +V    D+M  +  +P+   Y
Sbjct: 419 GDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAY 478

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N  ++    +G +  AF + + +  +  SS    Y  +I  LC+ G    A+ L  +M  
Sbjct: 479 NTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVT 538

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G   D  TY+ LI   C  G + EA  IF  M      P V  +   +   C+     L
Sbjct: 539 DGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYL 598

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           +   F+ M+E+G  PNE TY +L+  +      E + +   E+  R +V
Sbjct: 599 AYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLV 647



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 180/414 (43%), Gaps = 34/414 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M ++G  P VV    L+  L K    + A    + M + G++PD  +Y  L+N  CK
Sbjct: 323 LLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCK 382

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A+ L   ++  G     +TYN L+ G C LG+L  + +  + + ++  +P+  T
Sbjct: 383 AGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCT 442

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+  +   R +       D++++KG +P+  +YN  ++     G    A +   ++ 
Sbjct: 443 YTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMM 502

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G   + V+YN+L+  LC  G  ++A  L  +M         VTY  LI +    G+  
Sbjct: 503 LRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLI 562

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  + D MV     PS  +Y   I   C  G + L      +M     +PNE TYN L 
Sbjct: 563 EAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVL- 621

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
                                            + +LCR G+T  A+Q  +EM + G  P
Sbjct: 622 ---------------------------------MHALCRMGRTESAYQHFHEMLERGLVP 648

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + YTY+ LI G C EG    A+ ++  M +    PD    NAL  G  +    D
Sbjct: 649 NKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYD 702



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 181/387 (46%), Gaps = 35/387 (9%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A ++ + M +KG  PD++   +L+   CKA  +K+A+ +   +  +G+ P   +Y  L++
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C+ G++  A +L E+M +     +  TY  L+ G CM+ NL     F D ++ KGL P
Sbjct: 414 GYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           + F Y+  + A      +  A +L ++++ +G   + V+YNVL+ GLCK G  ++A   +
Sbjct: 474 DCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLW 533

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             + + G   + V+Y  L+ + C  GR  EA  +   M     SP++VTY I I +    
Sbjct: 534 MKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRR 593

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    A     +M++    P+  +YN ++  LC  G+ +   +   +M  R   PN+ TY
Sbjct: 594 GNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTY 653

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             L                                  I   C++G    A +L  EM + 
Sbjct: 654 TLL----------------------------------IDGSCKEGNWVHAIRLYCEMHQK 679

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALE 468
           G  PD  T+++L +G   EG + +A++
Sbjct: 680 GIHPDHCTHNALFKGF-GEGHMYDAVQ 705



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 144/323 (44%), Gaps = 4/323 (1%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G  P +   N +L  L    R ++    + D+   G EP++ +YN LL S C  GR ++A
Sbjct: 189 GVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQA 248

Query: 293 NELLAEMDGGDRS--PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
             LL +M+       P  VTYN++I  LA  G+ + A +++D M   + + SA +YNP+I
Sbjct: 249 VALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-KASAFTYNPLI 307

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
             L +   V+     L +M +    P   TYN L   L   G  + A      +  K   
Sbjct: 308 TGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLL 367

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  +I   C+ G   QA  L  ++ + G  P   TY+ LI G C  G +E A  +
Sbjct: 368 PDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRL 427

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              M E D  PDV  +  L+ G C  R   +    F  M+ KG  P+   Y   +     
Sbjct: 428 KEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELT 487

Query: 530 QDELELSAEVLKELQLRQVVSES 552
              +  + ++ +E+ LR + S++
Sbjct: 488 IGAITNAFQLREEMMLRGISSDT 510



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 1/218 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + +AF   E M+ +G   D V    L+  LCK   +K A  +   MV+ G+  D  +YT 
Sbjct: 491 ITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTC 550

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++  C++G +  A  + + M   G   + VTY   +   C  GNL  +  +  +++++G
Sbjct: 551 LIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEG 610

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + PN  TY+ L+ A  +     +A +   +++ +G  PN  +Y +L+ G CKEG    AI
Sbjct: 611 VEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAI 670

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           R + ++  KG  P+  ++N L +    EG   +A + L
Sbjct: 671 RLYCEMHQKGIHPDHCTHNALFKGF-GEGHMYDAVQYL 707



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 4/276 (1%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           + + +  F+++   G  P V   N +LR L    RW++   + ++M      P+I TYN 
Sbjct: 175 STQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNT 234

Query: 314 LIGSLAYHGKTDHALKVLDEM--VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           L+ S    G+ D A+ +L +M        P+  +YN +I  L  +G+++   + +D M  
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRL 294

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            + K +  TYN L   L     V++A A++  + N+        Y  +I  L + G    
Sbjct: 295 SK-KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEA 353

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A     EM   G  PD  TY+SLI G C  G +++AL +F  ++     P V  +N L+ 
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           G C+    + +  + + M E+  +P+  TYTIL+ G
Sbjct: 414 GYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNG 449


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 224/472 (47%), Gaps = 19/472 (4%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+S G   + V   +    LC   K +KA KV+  M+ +G +PD S+Y+ ++  LC    
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASR 504

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A  L ++M+  G   +  TY  L+      G + Q+  +LD +++ G  P   TY+ 
Sbjct: 505 VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTT 564

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF------R 262
           L+ A  K + V  A +L + +IAKG  PN+++Y  L+ G CK G  E+A + +       
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDA 624

Query: 263 DLPSKGF----------EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           D+P              +PNVV+Y  L+  LC   + ++A +LL  M      P  + Y+
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYD 684

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI       K D A +V  +MV+  + P+  +Y+ +I RL  + ++DLV+K L +M   
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 744

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C PN   Y  +   L  V K  EA+ ++  +  K        Y  +I    + GK  + 
Sbjct: 745 SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKC 804

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L  EM   G  P+  TY+ LI   C  G ++EA  +   M++  +   V ++  ++ G
Sbjct: 805 LELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEG 864

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
               R   LSL + + + + G  P    Y +L++       LE++ E+ KE+
Sbjct: 865 Y--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEV 914



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 223/509 (43%), Gaps = 66/509 (12%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   A+  +  M+  G  PD    + ++  LC A++++ A  + + M  +G++PD  +YT
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 138 YLVNCLCKKG-----------------------------------NVGYAMQLVEKMEDY 162
            L++C  K G                                    V  A +L E M   
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL--------------IQKGLV--PNAFTY 206
           G   N +TY +L+ G C  GN+ ++ Q   R+              I+  +   PN  TY
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L++   K   V  A  LL+ +   G +PN + Y+ L+ G CK  + +EA   F  +  
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G+ PNV +Y+ L+  L  + R +   ++L++M     +P IV Y  +I  L+   KTD 
Sbjct: 709 HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A K++  M +   +P+  +Y  +I      GKVD  ++   +M  + C PN  TY  L  
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ-----AFQLLYEMTK 440
             C  G + EA+A+++ +  KQ   P+      ++S C+  + Y+     +  LL E+ K
Sbjct: 829 HCCATGHLDEAYALLEEM--KQTYWPKH-----VSSYCKVIEGYKREFILSLGLLEEVEK 881

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            G  P    Y  LI      G +E ALE+   V+          + + +L+     + + 
Sbjct: 882 NGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKI 941

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGI 527
             + E+F  MI  G +P+  T+  L+ G+
Sbjct: 942 GHAFELFYDMIRDGVIPDLGTFVHLLMGL 970



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 211/479 (44%), Gaps = 52/479 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +AF   + M   G  PDV   T L+    KA  +K+A   ++ MV  G  P   +YT
Sbjct: 504 RVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL--- 194
            L++   K   V  A +L E M   G   N +TY +L+ G C  GN+ ++ Q   R+   
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623

Query: 195 -----------IQKGLV--PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
                      I+  +   PN  TY  L++   K   V  A  LL+ +   G +PN + Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + L+ G CK  + +EA   F  +   G+ PNV +Y+ L+  L  + R +   ++L++M  
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P IV Y  +I  L+   KTD A K++  M +   +P+  +Y  +I      GKVD 
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDK 803

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ------------------- 401
            ++   +M  + C PN  TY  L    C  G + EA+A+++                   
Sbjct: 804 CLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIE 863

Query: 402 --------SLG-----NKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT--P 445
                   SLG      K  S+P    YK +I +  + G+   A +L  E+     +   
Sbjct: 864 GYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAA 923

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
               Y+SLI        I  A E+F  M      PD+  F  LL+GL + RR + +L++
Sbjct: 924 KKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 225/557 (40%), Gaps = 105/557 (18%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   N A  +L R+   G+KP  +    L+    +A+K+  A  V   M   G+  D  
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +  +    LCK G    A+ L+EK ED+    NT+ YN ++ GLC      +++ FL+R+
Sbjct: 278 TLGFFAQALCKVGKWREALSLIEK-EDF--VPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TY  LL     ++ +    ++L  +IA+G  P+   +N L+   CK    
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL---------------------------------- 280
             A +  + +     +P  V YNIL+                                  
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454

Query: 281 -------RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL----- 328
                  R LC  G++E+A +++ EM G    P   TY+ +IG L    + ++A      
Sbjct: 455 VNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 329 ------------------------------KVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
                                           LDEMV+    P+  +Y  +I       K
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA-------------------FA 398
           V +  +  + M  + C PN  TY  L    C  G +++A                   F 
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           I  ++  K N      Y  ++  LC+  K   A  LL  M   G  P++  Y +LI G C
Sbjct: 635 IKNNVAEKPNVVT---YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
               ++EA E+F  M E+ Y P+V  +++L+  L K +R DL L+V   M+E    PN  
Sbjct: 692 KAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751

Query: 519 TYTILVEG---IAHQDE 532
            YT +++G   +A  DE
Sbjct: 752 IYTEMIDGLSKVAKTDE 768



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 190/415 (45%), Gaps = 14/415 (3%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C+ G    A++ + +++D+GY    +TYN+LV+       L+ +      + + G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLL--DDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           L  + FT  F  +A  K      A+ L+  +D +     PN + YN +++GLC+    EE
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV-----PNTILYNKMISGLCEASFFEE 326

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+ F   + S    PNV +Y ILL     + +      +L+ M      P+   +N L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMF 370
           +        +A K+L +M K   +P    YN +I  +CS G++      +L  K  ++M 
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 N+      A  LCG GK ++A+ +I  +           Y  VI  LC   +  
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF L  EM   G  PD YTY+ LI      G+I++A      M     +P V  +  L+
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLI 566

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               K+++  ++ E+F++MI KG  PN  TYT L++G      +E + ++   ++
Sbjct: 567 HAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 165/356 (46%), Gaps = 12/356 (3%)

Query: 55  KDSVYTKPNRKP-GNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK 113
           K++V  KPN    G   D   + HK+ DA   LE M   G +P+ +    L+   CKA K
Sbjct: 636 KNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAK 695

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           + +A +V   MV  G  P+  +Y+ L++ L K   +   ++++ KM +     N V Y  
Sbjct: 696 LDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           ++ GL  +   +++ + +  + +KG  PN  TY+ +++   K   V   ++L  ++ +KG
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE-- 291
             PN V+Y VL+   C  G  +EA     ++    +  +V SY  ++     EG   E  
Sbjct: 816 CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVI-----EGYKREFI 870

Query: 292 -ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS--YNP 348
            +  LL E++    +P I+ Y +LI +    G+ + AL++  E++      +A    Y  
Sbjct: 871 LSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTS 930

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSL 403
           +I       K+    +    M      P+ GT+  L M L  V + +EA  +  SL
Sbjct: 931 LIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 37/251 (14%)

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           E L E+ G D+       N+LI     +G  + AL+ L  +    ++P+  +YN ++   
Sbjct: 192 EFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVF 251

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
               K+D       Q+ HR     E +  GL+M        + F    +LG         
Sbjct: 252 LRADKLDTA-----QLVHR-----EMSELGLSM--------DEF----TLG--------- 280

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
              +   +LC+ GK  +A  L+    K  F P++  Y+ +I GLC     EEA++    M
Sbjct: 281 ---FFAQALCKVGKWREALSLI---EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
                 P+V  +  LL G    ++      +  MMI +G  P+ T +  LV      D+ 
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 534 ELSAEVLKELQ 544
             + ++LK+++
Sbjct: 395 SYAYKLLKKME 405



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 130/343 (37%), Gaps = 78/343 (22%)

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N+L+R  C  G W  A E L  +      PT +TYN L+       K D A  V  EM +
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 337 --------------------GRFR------------PSAASYNPIIARLCSEGKVDLVVK 364
                               G++R            P+   YN +I+ LC     +  + 
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMD 329

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCG------VGKVQE------------AFAIIQSLGNK 406
            L++M    C PN  TY    +LCG      +G+ +             ++ I  SL + 
Sbjct: 330 FLNRMRSTSCIPNVQTYR--ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHA 387

Query: 407 QNSSPQEFYKY--------------------VITSLCRKGK-----TYQAFQLLY-EMTK 440
              S    Y Y                    +I S+C  G+     T++  +  Y EM  
Sbjct: 388 YCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLS 447

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G   +     S  R LC  G  E+A ++   M    + PD   ++ ++  LC + R + 
Sbjct: 448 AGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVEN 507

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +  +F+ M   G +P+  TYTIL++  +    ++ +   L E+
Sbjct: 508 AFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEM 550


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 213/452 (47%), Gaps = 1/452 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K +DA    + MV +G  P+ +    ++    K   ++   ++ + M+  G  P+  
Sbjct: 207 RSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVV 266

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LC+ G +     L+++M  Y    +  TY+ L  GL   G+    L      
Sbjct: 267 TYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGES 326

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG++  A+T S LL    K+  V  A ++L+ ++  G  P    YN L+ G C+    
Sbjct: 327 LKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDL 386

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A   F  + S+   P+ ++YN L+  LC      EA +L+ EM+     P++ T+N L
Sbjct: 387 QGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTL 446

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G+ +    VL +M     + +  S+  ++   C  GK+   V  LD M H+  
Sbjct: 447 IDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDV 506

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN   YN +       G  ++AF +++ + +   S+    Y  ++  LC+  +  +A +
Sbjct: 507 VPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEE 566

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+Y +T  G  PD  +Y+++I   C +G  + ALE+   M +YD +P +  ++ LL  L 
Sbjct: 567 LIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALG 626

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
            + R      ++Q M+ K   P+ + Y    E
Sbjct: 627 SAGRVHDMECLYQHMVHKNVEPSSSIYGTRCE 658



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 218/490 (44%), Gaps = 44/490 (8%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P +     LL  L    +         ++V++G  PD  ++   V      G++  A+ +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 156 VEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           + +M   +   P +  +YN ++ GL   G  + +L+  D ++ +G+ PN  TY+ +++  
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K   + A  +L D ++  G KPN+V+YNVLL+GLC+ GR +E      ++ S    P+ 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 274 VSYNIL-----------------------------------LRSLCMEGRWEEANELLAE 298
            +Y+IL                                   L  LC +G+  +A ++L  
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           +      PT   YN LI           A  + ++M     RP   +YN +I  LC   K
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLC---K 417

Query: 359 VDLVVKCLD---QMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEF 414
           ++++ +  D   +M      P+  T+N L    G  G++++ F ++  + +K   S    
Sbjct: 418 MEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVIS 477

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  V+ + C+ GK  +A  +L +M      P++  Y+S+I      G  E+A  +   M+
Sbjct: 478 FGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMK 537

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
                  +  +N LL GLCK+ + D + E+   +  +G  P+  +Y  ++    ++ + +
Sbjct: 538 SSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTD 597

Query: 535 LSAEVLKELQ 544
            + E+L+E+ 
Sbjct: 598 RALELLQEMH 607



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 164/368 (44%), Gaps = 11/368 (2%)

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP--NLVSYNVLLTGLCKE 251
           L+  G  P+ F ++  ++A      +  A+ +L  +    G P  +  SYNV++ GL + 
Sbjct: 149 LVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRS 208

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G+  +A++ F ++  +G  PN ++YN ++      G  E    L  +M    R P +VTY
Sbjct: 209 GKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTY 268

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N+L+  L   G+ D    ++DEM      P   +Y+ +   L   G      + +  +F 
Sbjct: 269 NVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDS----RTMLSLFG 324

Query: 372 RRCKPNE--GTYNG---LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
              K     G Y     L  LC  GKV +A  +++ L +         Y  +I   C+  
Sbjct: 325 ESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVR 384

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
               AF +  +M      PD  TY++LI GLC   +I EA ++ + ME+    P V+ FN
Sbjct: 385 DLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFN 444

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            L+    ++ + +    V   M +KG   N  ++  +V+      ++  +  +L ++  +
Sbjct: 445 TLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHK 504

Query: 547 QVVSESAV 554
            VV  + V
Sbjct: 505 DVVPNAQV 512



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 168/359 (46%), Gaps = 13/359 (3%)

Query: 200 VPNAFTYSFLLEAAY---KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +P+  + + LLE+     +   V AA  LL   +A G +P+  ++N  +      G  +E
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLL---VAAGARPDTFAWNKAVQACVAAGDLDE 176

Query: 257 AIRFFRDLP-SKGFEP-NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           A+   R +  S+G  P +  SYN+++  L   G+  +A ++  EM     +P  +TYN +
Sbjct: 177 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G  +   ++ D+M++   +P+  +YN +++ LC  G++D     +D+M     
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM 296

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS---PQEFYKYVITSLCRKGKTYQA 431
            P+  TY+   +  G+ +  ++  ++   G                ++  LC+ GK  +A
Sbjct: 297 LPDGFTYS--ILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKA 354

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            Q+L  +   G  P +  Y++LI G C    ++ A  IF  M+    +PD   +NAL+ G
Sbjct: 355 EQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALING 414

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           LCK      + ++   M + G  P+  T+  L++      +LE    VL ++Q + + S
Sbjct: 415 LCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 104/206 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L   F  L  M  KG K +V+   +++   CK  K+ +A+ +++ M+   ++
Sbjct: 448 DAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVV 507

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A  Y  +++   + G    A  LVEKM+  G   +  TYN L++GLC    ++++ + 
Sbjct: 508 PNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEEL 567

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +  L  +GL P+  +Y+ ++ A   +     A++LL ++     +P L +Y+ LL+ L  
Sbjct: 568 IYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGS 627

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSY 276
            GR  +    ++ +  K  EP+   Y
Sbjct: 628 AGRVHDMECLYQHMVHKNVEPSSSIY 653


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 229/481 (47%), Gaps = 8/481 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A+  L+ M      P+++    ++  LCKA K+++A K+ E     G  PD  +Y 
Sbjct: 403 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 462

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L KKG V  A +L EKM D G+  N V Y SL+R   + G      +    LI++
Sbjct: 463 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+    +  ++  +K   V     + +DI + G  P++ SY++L+ GL K G+  E 
Sbjct: 523 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 582

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +  +GF  +  +YN ++   C  G+  +A E+L EM      PT+ TY  ++  
Sbjct: 583 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 642

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           LA   + D A  + +E        +   Y+ +I      G++D     L++M  +   PN
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQL 434
             T+N L   L    ++ EA    QS+  K+   P   Y Y  +I  LCR  K  +AF  
Sbjct: 703 VYTWNSLLDALVKAEEINEALVCFQSM--KEMKCPPNTYTYSILINGLCRVQKYNKAFVF 760

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M K G  P+  TY+++I GL   G I +A  +F   +     PD  +FNAL+ G+  
Sbjct: 761 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 820

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA---EVLKELQLRQVVSE 551
           + R   + +VF+    +G   N  +   L++ +   + LE +A    VL+E+   Q  S 
Sbjct: 821 ANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLREIAKSQHASR 880

Query: 552 S 552
           S
Sbjct: 881 S 881



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 222/452 (49%), Gaps = 2/452 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA+  LER+  +G  P VV   ++L  L K  K+ +A+ + E+M      P++S+Y 
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYN 392

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC  G V  A +++++ME      N +T N +V  LC    L ++ +  +   Q+
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 452

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  TY  L++   K+  V  A +L + ++  G   N V Y  L+      GR E+ 
Sbjct: 453 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 512

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F++L  +G +P++   N  +  +   G  E+   +  ++      P + +Y+ILI  
Sbjct: 513 HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 572

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+      +   M +  F   A +YN ++   C  GKV    + L++M  +  +P 
Sbjct: 573 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 632

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  +   L  + ++ EA+ + +   +K        Y  +I    + G+  +A+ +L 
Sbjct: 633 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 692

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G TP+ YT++SL+  L     I EAL  F  M+E    P+   ++ L+ GLC+ +
Sbjct: 693 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQ 752

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           + + +   +Q M ++G +PN  TYT ++ G+A
Sbjct: 753 KYNKAFVFWQDMQKQGLVPNVVTYTTMISGLA 784



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 258/570 (45%), Gaps = 54/570 (9%)

Query: 4   LLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSV-YTKP 62
           LL+S S+ + P P P   A  +++ +P LH           LA+ +  +     + Y  P
Sbjct: 96  LLASSSSASAPHPLP---ADAYHAVLPFLH---------HDLAALEKVLEEMAVLGYGLP 143

Query: 63  NRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME 122
           N+   +      R  +L+DA L +  M     +P     T L+  L +A + ++A++++ 
Sbjct: 144 NQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLR 203

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
            M   G       +T LV  L ++G V  A+ LV++++      + V YN  +      G
Sbjct: 204 QMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 263

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           N++ + +F   L  +GL P+  +Y+ ++    K   +  A +L   + A+   P   +YN
Sbjct: 264 NVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYN 323

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            ++ G    GR E+A +    L  +G  P+VVS+N +L  L  + + +EA  L  E+   
Sbjct: 324 TMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKK 382

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           D  P   TYNI+I  L   G+ + A ++LDEM      P+  + N ++ RLC   K++  
Sbjct: 383 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEA 442

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQS-LGNKQNSSP------- 411
            K  +    R C P+  TY   +++ G+GK   V EA+ + +  L    N++P       
Sbjct: 443 YKIFESASQRGCNPDCVTY--CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 500

Query: 412 ------------QEFYKYVITSLC---------------RKGKTYQAFQLLYEMTKYGFT 444
                        + +K +I   C               + G+  +   +  ++  YGF 
Sbjct: 501 RNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 560

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  +YS LI GL   G   E   IF  M++  +  D   +NA++ G CKS +   + E+
Sbjct: 561 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI 620

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            + M EK   P   TY  +V+G+A  D L+
Sbjct: 621 LEEMKEKCVQPTVATYGAIVDGLAKIDRLD 650



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 222/460 (48%), Gaps = 2/460 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M   G+        +L   L +A ++  A+  + +M      P  S+YT L+  L +
Sbjct: 132 LEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAE 191

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A++L+ +M++ GY      + +LVR L   G +  +L  +D +    L P+   
Sbjct: 192 ARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVL 251

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+  ++   K   V  A K   ++ A+G KP+ VSY  ++  LCK GR  EA   F  + 
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 311

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           ++   P   +YN ++      GR+E+A +LL  +      P++V++N ++  L    K D
Sbjct: 312 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 371

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL +  E++K    P++++YN II  LC  G+V+   + LD+M H    PN  T N + 
Sbjct: 372 EALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 430

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC   K++EA+ I +S   +  +     Y  +I  L +KG+  +A++L  +M   G  
Sbjct: 431 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 490

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            +   Y+SLIR   + G  E+  +IF  +     KPD+   N  +  + K+   +    +
Sbjct: 491 ANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 550

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F+ +   G +P+  +Y+IL+ G+    +   ++ +   ++
Sbjct: 551 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 177/395 (44%), Gaps = 4/395 (1%)

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           +++E+M   GY         L   L     L+ ++  +  + +    P    Y+ L+ A 
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGAL 189

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            + R    A++LL  +   G +  +  +  L+  L +EG+  +A+    ++     EP++
Sbjct: 190 AEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDI 249

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           V YN+ +      G  + A +   E+      P  V+Y  +I  L   G+   A ++  +
Sbjct: 250 VLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQ 309

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG-K 392
           M   R  P A +YN +I    S G+ +   K L+++  R C P+  ++N +    G   K
Sbjct: 310 MEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 369

Query: 393 VQEAFAIIQSLGNKQNSSP-QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           V EA ++ + +  K+++ P    Y  +I  LC  G+  +A+++L EM      P+  T +
Sbjct: 370 VDEALSLFEVM--KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVN 427

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            ++  LC    +EEA +IF    +    PD   + +L+ GL K  + D +  +F+ M++ 
Sbjct: 428 IMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 487

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           G   N   YT L+         E   ++ KEL  R
Sbjct: 488 GHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 69/152 (45%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++N+A +  + M      P+    + L+  LC+  K  KA    + M   G++
Sbjct: 711 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 770

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT +++ L K GN+  A  L E+ +  G   +  ++N+L+ G+       ++ Q 
Sbjct: 771 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQV 830

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
            +    +G   N  +   LL+A  K   +  A
Sbjct: 831 FEETRLRGCRINIKSCISLLDALNKSECLEQA 862


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 207/435 (47%), Gaps = 6/435 (1%)

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
           V + M + G+ PD+ +Y Y++   C+ GNV  A + + +M + G+  +  T   ++   C
Sbjct: 231 VFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC 290

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
               +N+++ F  ++ + GL PN   YS ++    K   V  A +LL++++  G KPN+ 
Sbjct: 291 EKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY 350

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           ++  L+ GLCK+G TE A R F  L  S  ++PNV +Y  ++   C E +   A  L   
Sbjct: 351 THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFER 410

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P   TY  LI      G    A ++++ M    F P+  +YN I+  LC  G+
Sbjct: 411 MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGR 470

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
            +   K L+  F  + + +  TY  L +  C    + +A   +  +           Y  
Sbjct: 471 AEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTT 530

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I + CR+     + +L  E+ K G  P   TY+S+I G C E  +  A++ F  M ++ 
Sbjct: 531 LIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHG 590

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             PD  ++ AL+ GLCK  R D + +++  MI+KG  P E T   L       ++   + 
Sbjct: 591 CAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAM 650

Query: 538 EVL----KELQLRQV 548
            +L    K+L +R V
Sbjct: 651 VILERLNKKLWIRTV 665



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 224/453 (49%), Gaps = 3/453 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K+K+A+ ++  M + G++        ++    +   V YA  + ++M   G   ++ TY 
Sbjct: 189 KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYK 248

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            ++ G C  GN+ ++ +++  ++++G V +  T + ++ A  ++  V+ A+     +   
Sbjct: 249 YIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKM 308

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G  PNL++Y+ +++GLCK G  ++A     ++   G++PNV ++  L+  LC +G  E A
Sbjct: 309 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERA 368

Query: 293 NELLAEMDGGDR-SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
             L  ++   D   P + TY  +I       K   A  + + M +    P+  +Y  +I 
Sbjct: 369 FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLID 428

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
             C  G      + ++ M +    PN  TYN +   LC  G+ +EAF ++ +    Q  +
Sbjct: 429 GHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEA 488

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I+  C++    QA   L +M K GF PD + Y++LI   C + +++++ ++F
Sbjct: 489 DGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLF 548

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             + +    P  + + +++ G C+ ++  L+++ FQ M + G  P+  +Y  L+ G+  +
Sbjct: 549 DEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKE 608

Query: 531 DELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
             L+  A  L +  + + +S   V R+ + Y++
Sbjct: 609 SRLD-EARQLYDTMIDKGLSPCEVTRVTLTYEY 640



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 193/434 (44%), Gaps = 38/434 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N A     ++   G  P+++  ++++  LCK   +K+A +++E MV +G  P+  ++T 
Sbjct: 295 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 354

Query: 139 LVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           L++ LCKKG    A +L  K+     Y  N  TY +++ G C    L+++    +R+ ++
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GLVPN  TY+ L++   K      A +L++ +  +G  PN  +YN ++ GLCK GR EEA
Sbjct: 415 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 474

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +          E + V+Y IL+   C      +A   L +M      P I  Y  LI +
Sbjct: 475 FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 534

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                    + K+ DE++K    P+  +Y  +I   C E KV L VK   +M    C P+
Sbjct: 535 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 594

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             +Y  L                                  I+ LC++ +  +A QL   
Sbjct: 595 SISYGAL----------------------------------ISGLCKESRLDEARQLYDT 620

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G +P   T  +L    C     E+     V++E  + K  +   + L+  LC  ++
Sbjct: 621 MIDKGLSPCEVTRVTLTYEYCK---TEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKK 677

Query: 498 TDLSLEVFQMMIEK 511
             L+   F  +++K
Sbjct: 678 VALAALFFHKLLDK 691



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 40/341 (11%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           FL+L R  S  +KP+V   T ++   CK  K+ +A  + E M   G++P+ ++YT L++ 
Sbjct: 372 FLKLIR--SDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDG 429

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG-------------------- 182
            CK GN   A +L+E M + G+  NT TYNS+V GLC  G                    
Sbjct: 430 HCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD 489

Query: 183 ---------------NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
                          ++NQ+L FL+++ + G  P+   Y+ L+ A  ++  +  + KL D
Sbjct: 490 GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFD 549

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           ++I  G  P   +Y  ++ G C+E +   A++FF+ +   G  P+ +SY  L+  LC E 
Sbjct: 550 EVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKES 609

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           R +EA +L   M     SP  VT   L            A+ +L+ + K  +     + +
Sbjct: 610 RLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLW---IRTVH 666

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            +I +LC E KV L      ++  +    +  T       C
Sbjct: 667 TLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTAC 707


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 231/474 (48%), Gaps = 6/474 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           R   L DA    + M  +G   P+ V  + L++ LC+  ++++A  + + M   G  P  
Sbjct: 242 RGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT L+  LC +G +  A  L ++M   G   N  TY  L+ GLC  G + ++     +
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ G+ P+  TY+ L+    K+  V  A +LL  +  +  KPN+ ++N L+ GLC+ G+
Sbjct: 362 MVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +A+   + +   G  P++VSYN+L+  LC EG    A +LL  M+  D  P  +T+  
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTA 481

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I +    GK D A   L  M++        +   +I  +C+ GK    +  L+ +   R
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMR 541

Query: 374 CKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
                 + N  L ML    K++E  A++  + NK    P    Y  ++  L R G    +
Sbjct: 542 MLTTPHSLNVILDMLSKGCKLKEELAMLGKI-NKLGLVPSVVTYTTLVDGLIRSGDISGS 600

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F++L  M   G  P+ Y Y+ +I GLC  G +EEA ++   M++    P+   +  ++ G
Sbjct: 601 FRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG--IAHQDELELSAEVLKEL 543
              + + D +LE  + M+E+G   N+  Y+ L+ G  ++ +   E   E +KEL
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKEL 714



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 225/465 (48%), Gaps = 2/465 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A++   RM + G    ++    ++  LCK    + A   M  ++  G + D+   T L+ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLL 238

Query: 142 CLCKKGNVGYAMQLVEKMEDYGY-PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             C+  N+  A+++ + M   G    N+V+Y+ L+ GLC +G L ++    D++ +KG  
Sbjct: 239 GFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ L++A      +  A  L D++IA+G KPN+ +Y VL+ GLC++G+ EEA   
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            R +   G  P+V++YN L+   C +GR   A ELL  M+     P + T+N L+  L  
Sbjct: 359 CRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK   A+ +L  M+     P   SYN +I  LC EG +++  K L  M     +P+  T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLT 478

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +  +    C  GK   A A +  +  K  S  +     +I  +C  GKT  A  +L  + 
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLV 538

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           K       ++ + ++  L     ++E L +   + +    P V  +  L+ GL +S    
Sbjct: 539 KMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIS 598

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            S  + ++M   G +PN   YTI++ G+     +E + ++L  +Q
Sbjct: 599 GSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 213/446 (47%), Gaps = 2/446 (0%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           ++LL  L K +    A      M + G +     Y  +VN LCK G    A   + K+  
Sbjct: 164 SSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILK 223

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG-LVPNAFTYSFLLEAAYKERGVH 220
            G+  ++    SL+ G C   NL  +L+  D + ++G   PN+ +YS L+    +   + 
Sbjct: 224 VGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLE 283

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A  L D +  KG +P+  +Y VL+  LC  G  ++A   F ++ ++G +PNV +Y +L+
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLI 343

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC +G+ EEAN +  +M      P+++TYN LI      G+   A ++L  M K   +
Sbjct: 344 DGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI 399
           P+  ++N ++  LC  GK    V  L +M      P+  +YN L   LC  G +  A+ +
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKL 463

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           + S+ +         +  +I + C++GK   A   L  M + G + D  T ++LI G+C 
Sbjct: 464 LTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCN 523

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G   +AL I   + +        + N +L  L K  +    L +   + + G +P+  T
Sbjct: 524 VGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVT 583

Query: 520 YTILVEGIAHQDELELSAEVLKELQL 545
           YT LV+G+    ++  S  +L+ ++L
Sbjct: 584 YTTLVDGLIRSGDISGSFRMLELMKL 609



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 192/396 (48%), Gaps = 11/396 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+RM+  G  PD+V    L+  LC+   M  A K++  M S  + PD  ++T ++N  CK
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCK 488

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G    A   +  M   G   + VT  +L+ G+C +G    +L  L+ L++  ++    +
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHS 548

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            + +L+   K   +   + +L  I   G  P++V+Y  L+ GL + G    + R    + 
Sbjct: 549 LNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMK 608

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PNV  Y I++  LC  GR EEA +LL+ M     SP  VTY +++     +GK D
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIAR--LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            AL+ +  MV+  +  +   Y+ ++    L  +G  +   +C+ ++     +   G+ +G
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISV-VEQLGGSTSG 727

Query: 384 LAM-----LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           L +     LC  G+  E+  ++Q++  K     ++    ++ S C K K  +  +L+  +
Sbjct: 728 LCIFLVTRLCKEGRTDESNGLVQTI-LKSGVFLEKAIDIIMESYCSKKKHTKCVELITLV 786

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
            K GF P   ++  +I+GL  EG  E A E+  VME
Sbjct: 787 LKSGFVPSFKSFCLVIQGLKKEGDTERAREL--VME 820



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 150/313 (47%), Gaps = 9/313 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  KL +    L ++   G  P VV  T L+  L ++  +  + +++E+M  SG +
Sbjct: 554 DMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCL 613

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   YT ++N LC+ G V  A +L+  M+D G   N VTY  +V+G    G L+++L+ 
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673

Query: 191 LDRLIQKGLVPNAFTYSFLLEA-AYKERGVHA----AMKLLDDIIAKGGKPNLVSYNVLL 245
           +  ++++G   N   YS LL      ++G+       +K L  ++ + G         L+
Sbjct: 674 VRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLV 733

Query: 246 TGLCKEGRTEEAIRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           T LCKEGRT+E+    + +   G F    +  +I++ S C + +  +  EL+  +     
Sbjct: 734 TRLCKEGRTDESNGLVQTILKSGVFLEKAI--DIIMESYCSKKKHTKCVELITLVLKSGF 791

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P+  ++ ++I  L   G T+ A +++ E++        +   P +  L   G    V+ 
Sbjct: 792 VPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVID 851

Query: 365 CLDQMFHRRCKPN 377
            +DQ+ H R +P 
Sbjct: 852 LVDQL-HSRERPT 863



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 1/155 (0%)

Query: 393 VQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           +++A  +   +  +   +P    Y  +I  LC  G+  +AF L  +M + G  P + TY+
Sbjct: 246 LRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            LI+ LC  GLI++A  +F  M     KP+V  +  L+ GLC+  + + +  V + M++ 
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           G  P+  TY  L+ G      +  + E+L  ++ R
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 195/375 (52%), Gaps = 35/375 (9%)

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           M+L+D + A+G +PN+V+YNV++  +C+EG  ++A      LPS+G +PN V+YN +L+ 
Sbjct: 1   MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC   RW +A ELL EM   +  P   T N+++ +L+  G      + L++M K     +
Sbjct: 61  LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             +YN +I+ +C +G VD  ++ L  M    CKP+  TYN L   LC   + ++A  ++ 
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMI 180

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +           +  +I+ LC+KG   QAF++  +M + G  P+S TYS++I GL   G
Sbjct: 181 KMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAG 240

Query: 462 LIEEALEIFVVMEEYDYK----------------------------------PDVDNFNA 487
            +E+ALE+   M    Y                                   P    FN 
Sbjct: 241 KMEQALELLNEMASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNT 300

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           +LL LC++ +TD +++V   M+  G MP+E TY IL+EG++++  L+ + E++  L  R 
Sbjct: 301 VLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRD 360

Query: 548 VVSESAVERLVMQYD 562
           V+S S ++   +  D
Sbjct: 361 VLSNSLIKNEALLLD 375



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 189/353 (53%)

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
           ++++++M + G  P+  +Y  +++ +C++G+V  A +L+  +   G   NTV YN++++G
Sbjct: 1   MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           LC +     + + LD ++++   PN  T + ++    ++  +    + L+ +   G   N
Sbjct: 61  LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           +V+YN +++G+C++G  + A+    ++ S G +P++V+YN LL+ LC   +WE+A EL+ 
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMI 180

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +M   D  P  VT+N +I  L   G    A +V  +M +    P++ +Y+ II  L   G
Sbjct: 181 KMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAG 240

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           K++  ++ L++M  +    ++        L    K++E   ++  L +   S     +  
Sbjct: 241 KMEQALELLNEMASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNT 300

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           V+  LCR GKT  A  +L +M  YG  PD  TY  LI GL  EG ++EA E+ 
Sbjct: 301 VLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELV 353



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 169/339 (49%), Gaps = 6/339 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+  ++ A   L  + S+G KP+ V    +L  LC   +   A ++++ MV     
Sbjct: 24  DAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELLDEMVRENCP 83

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+ ++   +VN L +KG +    + +EKM  +G   N VTYN+++ G+C  G+++ +L+ 
Sbjct: 84  PNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALEL 143

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   G  P+  TY+ LL+          A +L+  +      P+ V++N +++ LC+
Sbjct: 144 LSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQ 203

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +G   +A   F+ +P KG  PN  +Y+ ++  L   G+ E+A ELL EM     + T   
Sbjct: 204 KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYN-TDKM 262

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y +L  SL    K +  ++V+ ++      P    +N ++  LC  GK D  +  L  M 
Sbjct: 263 YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMV 322

Query: 371 HRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNK 406
              C P+E TY  + ++ G+   G +QEA  ++  L ++
Sbjct: 323 SYGCMPDELTY--IILIEGLSYEGYLQEARELVSRLCSR 359



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 4/145 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  A   L  M SKG+  D +    L   L K +K+++ ++V+  +  SGI P    + 
Sbjct: 241 KMEQALELLNEMASKGYNTDKMYQL-LTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFN 299

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC+ G   YA+ ++  M  YG   + +TY  L+ GL   G L ++ + + RL  +
Sbjct: 300 TVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSR 359

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAA 222
            ++ N+   +   EA   ++ +H++
Sbjct: 360 DVLSNSLIKN---EALLLDQNIHSS 381



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           ++ +++ K+ +    + ++   G  P  V    +L  LC+  K   AI V+  MVS G +
Sbjct: 268 ESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCM 327

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           PD  +Y  L+  L  +G +  A +LV ++      +  V  NSL++   +L + N
Sbjct: 328 PDELTYIILIEGLSYEGYLQEARELVSRL-----CSRDVLSNSLIKNEALLLDQN 377


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 220/452 (48%), Gaps = 6/452 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP+ V    L+  LCK ++   A+ V + M+ +G+  D +    L++C C+ G +  A +
Sbjct: 158 KPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARR 217

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L+  M  +    +  TY  LV   C  G +++   F++     G   +A  Y+F+++   
Sbjct: 218 LLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFI 277

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           +   +  A +L +  + K   P++ +YN LL  LCK  + EEA+  F++    G   +V 
Sbjct: 278 RCGRLAEATQLFESTMTKESVPDVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVF 336

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y+ L+ +    GR  +A E+   M      P  V YN+LI  L   GK D AL++L++M
Sbjct: 337 TYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 396

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ 394
            +    P   +YN +I  L S G+ +        M  R+  P+  TYN L  L G+ K++
Sbjct: 397 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTL--LNGLKKLR 454

Query: 395 ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
              EA  +   +   +       +  +I +L + G+   A +    + K G  P+SY Y+
Sbjct: 455 RTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYN 514

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LI G C  G +++  E+F  M E    PD   +  L+LG  +   T +++E+ Q M+ +
Sbjct: 515 ALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVRE 574

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           G  P   TY +L+  ++   ++E +  + KE+
Sbjct: 575 GHTPALATYNVLIRSLSMAGQVEDAYTLFKEM 606



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 219/450 (48%), Gaps = 3/450 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDASSYTYLVNCLCKKGNVGYAMQ 154
           PDVV    L+   CKA    +A+ +   +   G   P+A S+  LV  LCK      A+ 
Sbjct: 123 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 182

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           + ++M   G   +    N+L+   C LG L Q+ + L  +       +AFTY  L+ A  
Sbjct: 183 VFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHC 242

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           +   +H     ++     G   + V+YN ++ G  + GR  EA + F    +K   P+V 
Sbjct: 243 RAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVF 302

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YN+L+ +LC   + EEA  L  E + G     + TY+ L+ +    G+   AL+V   M
Sbjct: 303 TYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM 361

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKV 393
            K    P    YN +I+ L  +GKVD  ++ L+ M  +   P+  TYN  + +L   G+ 
Sbjct: 362 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           ++A++    +  +++S     Y  ++  L +  +T +A  L  EM      PD  T+ +L
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTL 481

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I  L   G +E+ALE    + +  + P+   +NAL+ G C+S + D   E+FQ MIE   
Sbjct: 482 IDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSC 541

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            P+  TYTILV G + +    ++ E+L+E+
Sbjct: 542 FPDSITYTILVLGFSRRGHTSMAMELLQEM 571



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 202/447 (45%), Gaps = 37/447 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA    + M+  G K DV     L++  C+   +++A +++  M +     DA +Y 
Sbjct: 176 RATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYG 235

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN  C+ G +      +E     G   + V YN +++G    G L ++ Q  +  + K
Sbjct: 236 ILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTK 295

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKL------------------LDDIIAKGGK---- 235
             VP+ FTY+ L+ A  K + +  A+ L                  L D   K G+    
Sbjct: 296 ESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKA 354

Query: 236 -------------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                        P+ V YNVL++ L K+G+ +EA+    D+  KG  P+  +YNI++  
Sbjct: 355 LEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDV 414

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           L   GR+E+A      M     SP +VTYN L+  L    +TD A  + DEM   +  P 
Sbjct: 415 LSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPD 474

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQ 401
             ++  +I  L   G+++  ++   ++      PN   YN L +  C  G+V + + + Q
Sbjct: 475 LTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQ 534

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +           Y  ++    R+G T  A +LL EM + G TP   TY+ LIR L M G
Sbjct: 535 DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAG 594

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +E+A  +F  M    + PD+  ++AL
Sbjct: 595 QVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 201/491 (40%), Gaps = 75/491 (15%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDASSYTYLVNCLCKKGNVG 150
           KG     V  T  +    +A  +  A+ +++ M       PD  ++T  ++ LC+   V 
Sbjct: 47  KGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVE 106

Query: 151 YAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
            AM L + M E      + V YN+L+ G C  G+ +++L    RL Q+G           
Sbjct: 107 QAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEG----------- 155

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
                                    KPN VS++ L+  LCK  R  +A+  F+++   G 
Sbjct: 156 -----------------------SCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGL 192

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           + +V   N L+   C  G   +A  LL  M     +    TY IL+ +    G+      
Sbjct: 193 KADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVAS 252

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
            ++         SA +YN II      G++    +  +    +   P+  TYN L  LC 
Sbjct: 253 FMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALCK 312

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
             +++EA  + Q             Y Y++ +  + G+  +A ++ Y M K G  PD+  
Sbjct: 313 SKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVV 372

Query: 450 YSSLIRGLCMEGLIEEALEI-----------------------------------FVVME 474
           Y+ LI  L  +G ++EALE+                                   F +M+
Sbjct: 373 YNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMK 432

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH----Q 530
              + PDV  +N LL GL K RRTD + ++F  M     MP+ TT+  L++ +A     +
Sbjct: 433 RRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRME 492

Query: 531 DELELSAEVLK 541
           D LE SA ++K
Sbjct: 493 DALEQSARLVK 503



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 146/310 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  +L +A    +     G   DV   + L+    KA +  KA++V   M  +G +PD  
Sbjct: 312 KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTV 371

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++CL K+G V  A++L+E M   G   +  TYN ++  L   G   ++  F   +
Sbjct: 372 VYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMM 431

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++   P+  TY+ LL    K R    A  L D++ A    P+L ++  L+  L K GR 
Sbjct: 432 KRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRM 491

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+     L   G  PN   YN L+   C  G+ ++  EL  +M      P  +TY IL
Sbjct: 492 EDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTIL 551

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G T  A+++L EMV+    P+ A+YN +I  L   G+V+       +M  +  
Sbjct: 552 VLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGF 611

Query: 375 KPNEGTYNGL 384
            P+  TY+ L
Sbjct: 612 NPDMQTYSAL 621



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 186/402 (46%), Gaps = 7/402 (1%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G P +  T  ++V+ +C LG      + L  L QKG+  +  T +  ++A  +   + AA
Sbjct: 13  GLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAA 72

Query: 223 MKLLDDIIAKGG--KPNLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNIL 279
           M +LDD+  +G   +P+ V++   +  LC+  R E+A+  F D+  +    P+VV+YN L
Sbjct: 73  MGMLDDM-RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTL 131

Query: 280 LRSLCMEGRWEEANELLAEMDG-GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           +   C  G  + A ++   +   G   P  V+++ L+  L    +   AL V  EM+   
Sbjct: 132 IAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAG 191

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
            +      N +I   C  G +    + L  M    C  +  TY  L    C  G++ E  
Sbjct: 192 LKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVA 251

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           + ++   +   +     Y ++I    R G+  +A QL          PD +TY+ LI  L
Sbjct: 252 SFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-AL 310

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C    +EEAL +F   E+     DV  ++ L+    K+ R   +LEVF  M + G MP+ 
Sbjct: 311 CKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDT 370

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
             Y +L+  +  Q +++ + E+L+++  + ++ +     +V+
Sbjct: 371 VVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVI 412



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 71/139 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  +  ++ DA  Q  R+V  GH P+      L+   C++ ++ K  ++ + M+     
Sbjct: 483 DTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCF 542

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD+ +YT LV    ++G+   AM+L+++M   G+     TYN L+R L M G +  +   
Sbjct: 543 PDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTL 602

Query: 191 LDRLIQKGLVPNAFTYSFL 209
              +I KG  P+  TYS L
Sbjct: 603 FKEMIAKGFNPDMQTYSAL 621


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 195/391 (49%), Gaps = 4/391 (1%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M ++GI P   ++  L+  LC+      A+Q+  +M D     +   Y  ++  LC +  
Sbjct: 5   MKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINK 64

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ +  + ++++Q G +P+  TY+ L+ + +K        ++ +++++KG  P LV+Y  
Sbjct: 65  LDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 124

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++ G CK GR ++A+   R L   G  P+   Y+ L+  LC   R EEA EL  EM  GD
Sbjct: 125 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EMAAGD 183

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
               IV Y   I  L   GK D A  V  +M++    P   SYN II  LC + +V    
Sbjct: 184 VQDVIV-YTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAK 242

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
           + +DQ   R+C P       L   LC   +V+EA  I++ +    + +P    Y  VI  
Sbjct: 243 ELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDG 302

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC+  +   A+ +L +M + G  PD  TY+++I   C  G ++EA E+F  M E     D
Sbjct: 303 LCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASD 362

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           V  +N L+ G C++ + D ++ + + M  +G
Sbjct: 363 VVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 393



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 4/366 (1%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           N A     +M+    KPD    T ++  LCK NK+  A    E MV SG +PD  +YT L
Sbjct: 31  NKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVL 90

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           V+ L K        Q+ E+M   G+    VTY ++V G C  G ++Q+L  + RL   G 
Sbjct: 91  VHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 150

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+   YS L++   K      A +L +  +A G   +++ Y   ++GLCK G+ +EA  
Sbjct: 151 SPSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKA 208

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               +   G  P+ VSYN+++ SLC + R  EA EL+ +       P +    +L+  L 
Sbjct: 209 VHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 268

Query: 320 YHGKTDHALKVLDEMVKGRFR-PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              + + A  +L+ M++   R PS  +Y+ +I  LC   ++D     L +M    C P+ 
Sbjct: 269 KSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDV 328

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY  +    C VG++ EA  + Q +  +  +S    Y  +I   CR  K  +A  ++ E
Sbjct: 329 VTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEE 388

Query: 438 MTKYGF 443
           M   G 
Sbjct: 389 MAGRGI 394



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 178/387 (45%), Gaps = 4/387 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M + G  P +V   +L+  LC+ N   KA+++   M+   + PDA  YT ++  LCK
Sbjct: 2   LGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCK 61

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A    E+M   G   + VTY  LV  L       Q  Q  + ++ KG  P   T
Sbjct: 62  INKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVT 121

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++    K   +  A+ L+  +   G  P+   Y+ L+ GLCK  R EEA   F    
Sbjct: 122 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--M 179

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G   +V+ Y   +  LC  G+ +EA  +  +M     +P  V+YN++I SL    +  
Sbjct: 180 AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVS 239

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-PNEGTYNG- 383
            A +++D+ ++ +  P       ++  LC   +V+     L++M     + P+  TY+  
Sbjct: 240 EAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAV 299

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           +  LC   ++ +A+ ++Q +           Y  +I + C+ G+  +A +L   M + G 
Sbjct: 300 IDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGC 359

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIF 470
             D   Y+ LIRG C    ++EA+ + 
Sbjct: 360 ASDVVAYNILIRGYCRAAKVDEAIAMI 386



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 160/332 (48%), Gaps = 4/332 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +KL+ A    E+MV  G  PD V  T L++ L KA K ++  ++ E M+S G  P+  +Y
Sbjct: 63  NKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 122

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +VN  CK G +  A+ L+ +++  G   +   Y++L+ GLC      ++ +  +  + 
Sbjct: 123 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MA 180

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G V +   Y+  +    K   +  A  +   +I  G  P+ VSYNV++  LCK+ R  E
Sbjct: 181 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 240

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILI 315
           A         +   P V    +L+  LC   R EEA  +L  M + GDR+P++VTY+ +I
Sbjct: 241 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVI 300

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L    + D A  VL +M +    P   +Y  II   C  G++D   +   +M  R C 
Sbjct: 301 DGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCA 360

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            +   YN L    C   KV EA A+I+ +  +
Sbjct: 361 SDVVAYNILIRGYCRAAKVDEAIAMIEEMAGR 392



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 179/398 (44%), Gaps = 37/398 (9%)

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L+ +M+  G     VT+ SL+R LC L   N++LQ   ++I   + P+AF Y+ ++    
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K   +  A    + ++  G  P+ V+Y VL+  L K  + E+  + F ++ SKG  P +V
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y  ++   C  GR ++A  L+  + G  RSP+   Y+ LI  L  H + + A + L EM
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEA-RELFEM 179

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ 394
             G  +     Y   I+ LC  GK+D       +M    C P+  +              
Sbjct: 180 AAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVS-------------- 224

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
                               Y  +I SLC+  +  +A +L+ +  +    P     + L+
Sbjct: 225 --------------------YNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLV 264

Query: 455 RGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
            GLC    +EEA  I   M E  D  P V  ++A++ GLCK+ R D +  V Q M   G 
Sbjct: 265 DGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGC 324

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +P+  TYT +++       L+ + E+ + +  R   S+
Sbjct: 325 VPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASD 362



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 132/301 (43%), Gaps = 43/301 (14%)

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           LL EM     +PTIVT+  LI  L     T+ AL++  +M+  + +P A  Y  +I  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA------------------ML--------- 387
              K+DL     +QM    C P++ TY  L                   ML         
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 388 ---------CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
                    C  G++ +A ++++ L     S     Y  +I  LC+  +  +A +L +EM
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAREL-FEM 179

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G   D   Y+S I GLC  G ++EA  + V M E    PD  ++N ++  LCK  R 
Sbjct: 180 AA-GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL-----QLRQVVSESA 553
             + E+    +E+  MP     T+LV+G+     +E +  +L+ +     +   VV+ SA
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 554 V 554
           V
Sbjct: 299 V 299



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 75/126 (59%), Gaps = 1/126 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHK-PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           +  ++ +A + LERM+  G + P VV  + ++  LCKA+++  A  V++ M  +G +PD 
Sbjct: 269 KSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDV 328

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT +++  CK G +  A +L ++M + G  ++ V YN L+RG C    +++++  ++ 
Sbjct: 329 VTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEE 388

Query: 194 LIQKGL 199
           +  +G+
Sbjct: 389 MAGRGI 394


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 224/461 (48%), Gaps = 3/461 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G+ P V+    +L  L  A+ +  A +  + M+S G+ P+  +Y  L+  LC +G+   A
Sbjct: 111 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + ++  M   G   N VTYN+LV      G ++ + + +  ++  GL PN  T++ ++  
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K   +  A K+ D+++ +G  P+ VSYN L+ G CK G + EA+  F ++  KG  P+
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV++  L+  +C  G  E A  L+ +M         VT+  LI      G  D AL  + 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVG 391
            M + R +PS   YN +I   C  G++D   + L +M  +  KP+  TY+  ++  C   
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
               AF + Q +  K        Y  +I  LC + +   A  L   M K G  PD +TY+
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SLI G C EG +E AL +   M +    PDV  ++ L+ GL KS R   + ++   +  +
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 529

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             +P  T Y  L+     + EL+    +LK   ++ +++E+
Sbjct: 530 EPIPANTKYDALMH-CCRKAELKSVLALLKGFCMKGLMNEA 569



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 271/583 (46%), Gaps = 41/583 (7%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNK-------GFI-RVLASTQVTI 52
           +   L ++  L +  P PF      Y+ +PN  S +          G++  VLA   V +
Sbjct: 65  LVCFLRALRLLPSSPPRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLL 124

Query: 53  SPKDSVYTKPNR--------KPGNNNDTRH--------RDHKLNDAFLQLERMVSKGHKP 96
           +  D+  T   R            N  T +        R H+  +A   L  M   G  P
Sbjct: 125 ALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHR-KEALSILRDMRGAGCGP 183

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           +VV    L+    +A ++  A +++ MM+  G+ P+  ++  +VN +CK G +  A ++ 
Sbjct: 184 NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 243

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
           ++M   G   + V+YN+LV G C  G  +++L     + QKG++P+  T++ L+    K 
Sbjct: 244 DEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 303

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
             +  A+ L+  +  +G + N V++  L+ G CK+G  ++A+   R +     +P+VV Y
Sbjct: 304 GNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCY 363

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N L+   CM GR +EA ELL EM+     P +VTY+ +I +   +  T  A ++  +M++
Sbjct: 364 NALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 423

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQE 395
               P A +Y+ +I  LC E ++         M     +P+E TY  L    C  G V+ 
Sbjct: 424 KGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVER 483

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS---- 451
           A ++   +           Y  +I  L +  +  +A QLL+++      P +  Y     
Sbjct: 484 ALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMH 543

Query: 452 -----------SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
                      +L++G CM+GL+ EA +++  M + ++  D   ++ L+ G C++     
Sbjct: 544 CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 603

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +L   + M+++G  PN T+   L+ G+     +  + +V+++L
Sbjct: 604 ALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 646



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 213/455 (46%), Gaps = 16/455 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ DA    + M+ +G  PD V    L+   CKA    +A+ V   M   GI+PD  ++T
Sbjct: 235 KMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFT 294

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ +CK GN+ +A+ LV +M + G   N VT+ +L+ G C  G L+ +L  +  + Q 
Sbjct: 295 SLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQC 354

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+   Y+ L+        +  A +LL ++ AKG KP++V+Y+ +++  CK   T  A
Sbjct: 355 RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSA 414

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + +  KG  P+ ++Y+ L+R LC E R  +A+ L   M      P   TY  LI  
Sbjct: 415 FELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 474

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  + AL + D+MVK    P   +Y+ +I  L    +     + L +++H    P 
Sbjct: 475 HCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPA 534

Query: 378 EGTYNG-------------LAML---CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
              Y+              LA+L   C  G + EA  + QS+ ++  +     Y  +I  
Sbjct: 535 NTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHG 594

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            CR G   +A     +M + GF P+S +  SLIRGL   G++ EA ++   +       D
Sbjct: 595 HCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLAD 654

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            +   AL+         D  L+V   M + G +P+
Sbjct: 655 AEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 224/461 (48%), Gaps = 2/461 (0%)

Query: 86   LERMVSKGHKPDVVQATNLLYDLCK-ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
             E+M++ G    V      L  L K  NK   AI V       G+  + +SY  +++ +C
Sbjct: 621  FEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVC 680

Query: 145  KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
            + G +  A  L+  ME  GY  + ++Y++++ G C  G L++  + ++++ QKGL PN++
Sbjct: 681  QLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSY 740

Query: 205  TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            TY  ++    +   +  A +   ++I +G  P+ + Y  L+ G CK G    A +FF ++
Sbjct: 741  TYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM 800

Query: 265  PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             S+   P+V++Y  ++   C  G   EA +L  EM      P I+T+  L+      G  
Sbjct: 801  HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHI 860

Query: 325  DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
              A +V + M++    P+  +Y  +I  LC EG +D   + L +M+    +PN  TYN +
Sbjct: 861  KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 920

Query: 385  AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               LC  G ++EA  ++        ++    Y  ++ + C+ G+  +A ++L EM   G 
Sbjct: 921  VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGL 980

Query: 444  TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             P   T++ L+ G C+ G++E+  ++   M      P+   FN L+   C       +  
Sbjct: 981  QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATA 1040

Query: 504  VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +++ M  +G  P+  TY  LV+G  +   ++ +  + +E++
Sbjct: 1041 IYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMK 1081



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 214/437 (48%), Gaps = 1/437 (0%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R  +L+  +  +E+M  KG KP+     +++  LC+  K+ +A +    M+  GI+PD  
Sbjct: 716  RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             YT LV+  CK+G++  A +   +M       + +TY +++ G C +G++ ++ +    +
Sbjct: 776  VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + +GL P+  T++ L+    K   +  A ++ + +I  G  PN+V+Y  L+ GLCKEG  
Sbjct: 836  LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            + A     ++   G +PN+ +YN ++  LC  G  EEA +L+ E +    +   VTY  L
Sbjct: 896  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
            + +    G+ D A ++L EM+    +P+  ++N ++   C  G ++   K L+ M  +  
Sbjct: 956  MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015

Query: 375  KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             PN  T+N L    C    ++ A AI + + ++      + Y+ ++   C      +A+ 
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWF 1075

Query: 434  LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L  EM   GF+    TYS LI+G        EA EIF  M       D + F+       
Sbjct: 1076 LFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKY 1135

Query: 494  KSRRTDLSLEVFQMMIE 510
            K +R D  ++    +IE
Sbjct: 1136 KGKRPDTIVDPIDEIIE 1152



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 226/463 (48%), Gaps = 1/463 (0%)

Query: 104  LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
            +++ +C+  ++ +A  ++ +M   G  PD  SY+ ++N  C+ G +    +L+EKM+  G
Sbjct: 675  VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKG 734

Query: 164  YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
               N+ TY S++  LC +  L ++ +    +I +G++P+   Y+ L++   K   + AA 
Sbjct: 735  LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAAS 794

Query: 224  KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            K   ++ ++   P++++Y  +++G C+ G   EA + F ++  +G EP+++++  L+   
Sbjct: 795  KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGY 854

Query: 284  CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
            C  G  ++A  +   M     SP +VTY  LI  L   G  D A ++L EM K   +P+ 
Sbjct: 855  CKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 914

Query: 344  ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
             +YN I+  LC  G ++  VK + +        +  TY  L    C  G++ +A  I+  
Sbjct: 915  FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTE 974

Query: 403  LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
            +  K        +  ++   C  G      +LL  M   G  P++ T++ L++  C+   
Sbjct: 975  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNN 1034

Query: 463  IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            ++ A  I+  M     +PD   +  L+ G C +R    +  +FQ M  KG   + +TY++
Sbjct: 1035 LKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSV 1094

Query: 523  LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
            L++G   + +   + E+  +++   + ++  +        ++G
Sbjct: 1095 LIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKG 1137



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 209/436 (47%), Gaps = 1/436 (0%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            ++N+A   L  M  KG+ PDV+  + ++   C+  ++ K  K++E M   G+ P++ +Y 
Sbjct: 684  RINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYG 743

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             ++  LC+   +  A +   +M   G   +T+ Y +LV G C  G++  + +F   +  +
Sbjct: 744  SIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSR 803

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             + P+  TY+ ++    +   +  A KL  +++ +G +P+++++  L+ G CK G  ++A
Sbjct: 804  DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDA 863

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             R    +   G  PNVV+Y  L+  LC EG  + ANELL EM      P I TYN ++  
Sbjct: 864  FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 923

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            L   G  + A+K++ E           +Y  ++   C  G++D   + L +M  +  +P 
Sbjct: 924  LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPT 983

Query: 378  EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              T+N L    C  G +++   ++  +  K  +     +  ++   C +     A  +  
Sbjct: 984  IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYK 1043

Query: 437  EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            +M   G  PD  TY +L++G C    ++EA  +F  M+   +   V  ++ L+ G  K +
Sbjct: 1044 DMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRK 1103

Query: 497  RTDLSLEVFQMMIEKG 512
            +   + E+F  M   G
Sbjct: 1104 KFVEAREIFDQMRRDG 1119



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 73/137 (53%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  VI  +C+ G+  +A  LL  M   G+TPD  +YS++I G C  G +++  ++   M+
Sbjct: 672 YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK 731

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +   KP+   + +++  LC+  +   + E F  MI +G +P+   YT LV+G   + ++ 
Sbjct: 732 QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791

Query: 535 LSAEVLKELQLRQVVSE 551
            +++   E+  R +  +
Sbjct: 792 AASKFFYEMHSRDITPD 808



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 63/128 (49%)

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           KT  A  +  E  + G   +  +Y+ +I  +C  G I EA  + ++ME   Y PDV +++
Sbjct: 649 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYS 708

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ G C+    D   ++ + M +KG  PN  TY  ++  +    +L  + E   E+  +
Sbjct: 709 TVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQ 768

Query: 547 QVVSESAV 554
            ++ ++ V
Sbjct: 769 GILPDTIV 776


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 238/499 (47%), Gaps = 13/499 (2%)

Query: 49  QVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL 108
           ++ IS    +  + N  P ++  T    + ++ A      ++ +       +   +L  L
Sbjct: 19  KIPISISFLILLQKNFIPYSSISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSL 78

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
            K+      + + + M   GI P+  ++  L+NC C+ G + +A  ++ K+   GY  + 
Sbjct: 79  VKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDI 138

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           +T N+ ++G C+ G ++Q+L F D+L+  G   +  +Y  L+    K     AA++LL  
Sbjct: 139 ITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRR 198

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +  K  + N V YN ++ G+ K+    +A   + ++ +K   P+VV+Y+ L+R   + G+
Sbjct: 199 VDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGK 258

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            ++A +L  +M   +  P + T+NIL+      G+   A  VLD M+    +P+ +++N 
Sbjct: 259 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNT 318

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQ 407
           ++   C + K+         M  +  KPN  TY  L    C V +V +A  I  ++  + 
Sbjct: 319 LVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRG 378

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            ++    Y  +I   C+  K  +A +L  EM      PD  TY+SLI GLC  G I  A 
Sbjct: 379 VTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAF 438

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++   M +    P++  +N++L  L    +            ++G  PN  T TIL++G+
Sbjct: 439 QLVNEMHDRGQPPNIITYNSILNALLTKLK------------DQGIQPNMHTDTILIKGL 486

Query: 528 AHQDELELSAEVLKELQLR 546
               +LE + +V ++L ++
Sbjct: 487 CQSGKLEAARKVFEDLLVK 505



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 164/368 (44%), Gaps = 11/368 (2%)

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           S+ FL  L+QK  +P    YS  +   +    V  A+ L + ++ +        +N +L 
Sbjct: 23  SISFL-ILLQKNFIP----YS-SISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILG 76

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            L K       +   + +  +G  PN V++NIL+   C  G    A  +LA++      P
Sbjct: 77  SLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEP 136

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            I+T N  I      G+   AL   D++V   F     SY  +I  LC  G+    ++ L
Sbjct: 137 DIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLL 196

Query: 367 DQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            ++  +  + N   YN   ++ G+ K   V +AF +   +  K+ S     Y  +I    
Sbjct: 197 RRVDGKLVQLNAVMYN--TVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFF 254

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
             GK   A  L  +M      PD YT++ L+ G C EG +++A  +  +M   D KP+V 
Sbjct: 255 IVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVS 314

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            FN L+ G CK R+      VF MM+++G  PN  TY  L++G     ++  + ++   +
Sbjct: 315 TFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTM 374

Query: 544 QLRQVVSE 551
             R V + 
Sbjct: 375 SQRGVTAN 382



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/441 (21%), Positives = 184/441 (41%), Gaps = 69/441 (15%)

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
           +N +  A+ +   ++       A  +  ++  L K  +    + L ++ME  G   N VT
Sbjct: 46  SNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVT 105

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           +N L+   C                Q GL+P AF+                   +L  I+
Sbjct: 106 FNILINCFC----------------QLGLIPFAFS-------------------VLAKIL 130

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
             G +P++++ N  + G C +G+  +A+ F   L + GF  + VSY  L+  LC  G   
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            A +LL  +DG       V YN +I  ++     + A  +  EMV  R  P   +Y+ +I
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS 410
                 GK+   +   ++M     KP+  T+N L                          
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL-------------------------- 284

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
                   +   C++G+  +A  +L  M      P+  T+++L+ G C +  ++E   +F
Sbjct: 285 --------VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVF 336

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            +M +   KP+V  + +L+ G C  ++ + + ++F  M ++G   N  +Y I++ G    
Sbjct: 337 AMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKI 396

Query: 531 DELELSAEVLKELQLRQVVSE 551
            +++ + ++  E+  + ++ +
Sbjct: 397 KKVDKAMKLFIEMHHKHIIPD 417


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 223/475 (46%), Gaps = 1/475 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  DA L  +    K  +P VV    ++   CK   +  A     MM+  G++PDA 
Sbjct: 258 RQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAY 317

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++ LC  G++G A+ L   ME++G   + VTYN L +G  +LG +N +   + ++
Sbjct: 318 SYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKM 377

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG  PN  TY+ L+    +   V  A+KL  ++I+ G + +++S  VLL  LCK  + 
Sbjct: 378 LIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQV 437

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A + F ++ + G  P++++Y+ L+  LC +G  ++A  L  +M      P  + +  +
Sbjct: 438 DVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAI 497

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   GK   A    D ++          YN +I      G     VK   Q+  +  
Sbjct: 498 LMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGI 557

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P   T+N L    C   K+ +A  ++ ++           Y  ++   C +G      +
Sbjct: 558 SPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE 617

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL EM      P   TY+ +I+GLC +  ++E+ ++   M+     PD  ++N ++   C
Sbjct: 618 LLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFC 677

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           K+R    + +++  M+     P   TY IL+ G     +L+ +  +L  LQ R+V
Sbjct: 678 KARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKV 732



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 207/429 (48%), Gaps = 1/429 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M+S G +  ++ +T LL  LCK+ ++  A K+   M ++G+ PD  +Y+ L++ LCK+
Sbjct: 410 KEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQ 469

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V  A+ L EKM       N++ + +++ GLC  G ++Q+  + D LI   L  +   Y
Sbjct: 470 GEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILY 529

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + +++   K      A+KL   +  KG  P +V++N L+ G C   +  +A R    +  
Sbjct: 530 NIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKL 589

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G EPN V+Y  L+   C EG  +   ELL+EM      PT +TY ++I  L    K   
Sbjct: 590 HGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQE 649

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           + ++L++M      P   SYN II   C    +    +  D+M     +P   TYN L  
Sbjct: 650 SCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILIN 709

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C  G +++A  ++ SL N++ +  +  Y  +I + C KG   +A     +M + GF  
Sbjct: 710 GFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEV 769

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
               YS++I  LC   L+ EA   F +M      PD D F  LL    +    +   E+ 
Sbjct: 770 SIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELL 829

Query: 506 QMMIEKGQM 514
             MI+ G +
Sbjct: 830 AEMIKSGWL 838



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 224/469 (47%), Gaps = 7/469 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N A+  +++M+ KG  P++V  T L+   C+   +++A+K+ + M+S G      S T 
Sbjct: 367 INGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTV 426

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  LCK   V  A +L  +ME  G   + +TY++L+ GLC  G + Q++   +++    
Sbjct: 427 LLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR 486

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++PN+  +  +L    ++  +  A    D +I      +++ YN+++ G  K G T EA+
Sbjct: 487 IIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAV 546

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           + ++ L  KG  P +V++N L+   C+  +  +A  LL  +      P  VTY  L+   
Sbjct: 547 KLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVY 606

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G     L++L EM      P+  +Y  +I  LC + K+    + L+ M      P++
Sbjct: 607 CEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQ 666

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            +YN +    C    +++AF +   +           Y  +I   C  G    A  LL  
Sbjct: 667 VSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVS 726

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +       + Y Y+++I+  C +G +++A+  F  M E  ++  + +++A++  LCK   
Sbjct: 727 LQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCL 786

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ-----DELELSAEVLK 541
              +   F MM+  G  P++  + +L+    HQ      E EL AE++K
Sbjct: 787 VTEAKYFFCMMLSDGVCPDQDLFEVLLNAF-HQCGHLNSEFELLAEMIK 834



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 226/470 (48%), Gaps = 4/470 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++DA   L +M        +    +LLY+L  +N M      +++   SG      
Sbjct: 191 RSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKV---SGTPQSEY 247

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + +V+ LC++     A+   +  E   +  + V++N+++   C LG ++ +  F   +
Sbjct: 248 TSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMM 307

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ GL+P+A++Y+ L+        +  A+ L +D+   G +P++V+YN+L  G    G  
Sbjct: 308 LKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLI 367

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A    + +  KG  PN+V+Y +L+   C  G  EEA +L  EM       +I++  +L
Sbjct: 368 NGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVL 427

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +GSL    + D A K+  EM     RP   +Y+ +I  LC +G+V   +   ++M   R 
Sbjct: 428 LGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRI 487

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN   +  + M LC  GK+ +A      L     S     Y  +I    ++G T +A +
Sbjct: 488 IPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVK 547

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  ++ + G +P   T++SL+ G C+   + +A  +   ++ +  +P+   +  L+   C
Sbjct: 548 LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +       LE+   M  K   P   TYT++++G+  Q +L+ S ++L+++
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDM 657



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 197/405 (48%), Gaps = 36/405 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  +++ AF     M + G +PD++  + L++ LCK  ++++AI + E M S+ IIP++ 
Sbjct: 433 KSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSL 492

Query: 135 SYTYLVNCLCKKGNV---------------------------GY--------AMQLVEKM 159
            +  ++  LC+KG +                           GY        A++L +++
Sbjct: 493 IHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQL 552

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
            + G     VT+NSL+ G C+   L+Q+ + LD +   GL PNA TY+ L+    +E  +
Sbjct: 553 GEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNM 612

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
            + ++LL ++ AK   P  ++Y V++ GLCK+ + +E+ +   D+ + G  P+ VSYN +
Sbjct: 613 QSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTI 672

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +++ C      +A +L  +M   +  PT VTYNILI     +G    A  +L  +   + 
Sbjct: 673 IQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKV 732

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFA 398
             +  +Y  II   C++G VD  V    QM  +  + +   Y+  +  LC    V EA  
Sbjct: 733 NLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKY 792

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               + +      Q+ ++ ++ +  + G     F+LL EM K G+
Sbjct: 793 FFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGW 837


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 225/462 (48%), Gaps = 4/462 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L  M+ +G   +V     LL  LC+  +  KA+ ++  M  + ++PD  SY  ++ 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C+   +  A++L  +M+  G   + VT+  L+   C  G +++++ FL  +   GL  
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +   Y+ L+        +     L D+++ +G  P  ++YN L+ G CK G+ +EA   F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G  PNV +Y  L+  LC  G+ +EA +LL  M   D  P  VTYNI+I  L   
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR--CKPNEG 379
           G    A+++++ M K R RP   +YN ++  LC++G +D   K L  M        P+  
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           +YN L   LC   ++ +A  I   L  K  +  +     ++ S  + G   +A +L  ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
           +      +S TY+++I G C  G++  A  +   M   + +P V ++N LL  LCK    
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D +  +F+ M      P+  ++ I+++G     +++ SAE L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK-SAESL 586



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 218/453 (48%), Gaps = 3/453 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +   A   L  M      PDV     ++   C+  +++KA+++   M  SG      
Sbjct: 154 RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++  CK G +  AM  +++M+  G   + V Y SL+RG C  G L++     D +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G  P A TY+ L+    K   +  A ++ + +I +G +PN+ +Y  L+ GLC  G+T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA++    +  K  EPN V+YNI++  LC +G   +A E++  M      P  +TYNIL
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393

Query: 315 IGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +G L   G  D A K+L  M+K      P   SYN +I  LC E ++   +   D +  +
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
               +  T N L       G V +A  + + + + +     + Y  +I   C+ G    A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             LL +M      P  + Y+ L+  LC EG +++A  +F  M+  +  PDV +FN ++ G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
             K+     +  +   M   G  P+  TY+ L+
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 227/452 (50%), Gaps = 5/452 (1%)

Query: 101 ATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
             NL+  L ++   + A      M+ +    +  S + L+ C  +    G+A  ++  M 
Sbjct: 75  GNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALML 134

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
             G+  N   +N L++GLC      +++  L  + +  L+P+ F+Y+ ++    + + + 
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A++L +++   G   +LV++ +L+   CK G+ +EA+ F +++   G E ++V Y  L+
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254

Query: 281 RSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           R  C  G  +    L  E ++ GD SP  +TYN LI      G+   A ++ + M++   
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGD-SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
           RP+  +Y  +I  LC  GK    ++ L+ M  +  +PN  TYN +   LC  G V +A  
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK-YGFT-PDSYTYSSLIRG 456
           I++ +  ++       Y  ++  LC KG   +A +LLY M K   +T PD  +Y++LI G
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           LC E  + +AL+I+ ++ E     D    N LL    K+   + ++E+++ + +   + N
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             TYT +++G      L ++  +L ++++ ++
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 198/419 (47%), Gaps = 38/419 (9%)

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N+L+  L    N   +  F  ++++     N  + S LLE   + R    A  +L  ++ 
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           +G   N+ ++N+LL GLC+     +A+   R++      P+V SYN ++R  C     E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV---------------- 335
           A EL  EM G   S ++VT+ ILI +    GK D A+  L EM                 
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 336 -----------KGRF--------RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                      K  F         P A +YN +I   C  G++    +  + M  R  +P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TY GL   LCGVGK +EA  ++  +  K        Y  +I  LC+ G    A +++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE-IFVVMEEYDY-KPDVDNFNALLLGLC 493
             M K    PD+ TY+ L+ GLC +G ++EA + +++++++  Y  PDV ++NAL+ GLC
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           K  R   +L+++ +++EK    +  T  IL+       ++  + E+ K++   ++V  S
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 208/437 (47%), Gaps = 52/437 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A   L+ M   G + D+V  T+L+   C   ++ +   + + ++  G  P A +Y 
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK G +  A ++ E M + G   N  TY  L+ GLC +G   ++LQ L+ +I+K
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PNA TY+ ++    K+  V  A+++++ +  +  +P+ ++YN+LL GLC +G  +EA
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406

Query: 258 IRFFRDL--PSKGFEPNVVSYNILLRSLCMEGRWEEA----NELLAEMDGGDRSPTIVTY 311
            +    +   S   +P+V+SYN L+  LC E R  +A    + L+ ++  GDR    VT 
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR----VTT 462

Query: 312 NILIGSLAYHGKTDHALKVLDE---------------MVKG------------------- 337
           NIL+ S    G  + A+++  +               M+ G                   
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 338 -RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKV 393
              +PS   YN +++ LC EG +D   +  ++M      P+  ++N   M+ G    G +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN--IMIDGSLKAGDI 580

Query: 394 QEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + A +++  + ++   SP  F Y  +I    + G   +A     +M   GF PD++   S
Sbjct: 581 KSAESLLVGM-SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639

Query: 453 LIRGLCMEGLIEEALEI 469
           +++    +G  ++  E+
Sbjct: 640 VLKYCISQGETDKLTEL 656



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 165/365 (45%), Gaps = 3/365 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  +A   L  M+ K  +P+ V    ++  LCK   +  A++++E+M      PD  +Y 
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391

Query: 138 YLVNCLCKKGNVGYAMQLVEKM-EDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            L+  LC KG++  A +L+  M +D  Y   + ++YN+L+ GLC    L+Q+L   D L+
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K    +  T + LL +  K   V+ AM+L   I       N  +Y  ++ G CK G   
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A      +     +P+V  YN LL SLC EG  ++A  L  EM   +  P +V++NI+I
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G    A  +L  M +    P   +Y+ +I R    G +D  +   D+M     +
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631

Query: 376 PNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+    + +   C   G+  +   +++ L +K     +E    V+  +C         + 
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKR 691

Query: 435 LYEMT 439
           L  +T
Sbjct: 692 LLRVT 696



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 62/126 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A+   E M    + PDVV    ++    KA  +K A  ++  M  +G+ PD  
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+N   K G +  A+   +KM D G+  +    +S+++     G  ++  + + +L
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660

Query: 195 IQKGLV 200
           + K +V
Sbjct: 661 VDKDIV 666


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 232/467 (49%), Gaps = 3/467 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++  A   L+ M S+  KPDV     L+  + K   +  A+KV + M   G++ D +
Sbjct: 163 KKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVT 222

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y  L++   K G+     ++ E++ +D     N VTYN ++ GLC  G  ++SL+  +R
Sbjct: 223 CYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWER 282

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +     + FTYS L+    +   +  A+++  +I+      + V++N +L G C+ G+
Sbjct: 283 MTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGK 342

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +E+   +  +  +  +  VVSYNIL++ L   G+ EEA  +   +      P   TY +
Sbjct: 343 IKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGV 401

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L  +G+ + ALK+  E   G  +  A +Y+ ++  LC EG++D  +  ++QM  R 
Sbjct: 402 LIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRG 461

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            K +    N L        K+++A    + +  K  S     Y  +I  LC+  +  +A+
Sbjct: 462 YKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAY 521

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             + EM +  + PD  T S L+ GLC E  IE AL ++    +  +KPD+  +N L+ GL
Sbjct: 522 SFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGL 581

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           C   + + +L+++  M     +PN  T   L+EG+    + E ++E+
Sbjct: 582 CSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEI 628



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 234/465 (50%), Gaps = 4/465 (0%)

Query: 99  VQATNLLYDL-CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           +Q  N+L  + CK  +++KAI +++ M S  + PD  SY  L+N + K G++  A+++ +
Sbjct: 151 LQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFD 210

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKE 216
           +M   G   +   YN L+ G    G+ ++  +  +RL++   V PN  TY+ ++    K 
Sbjct: 211 EMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKC 270

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
                ++++ + +     + ++ +Y+ L+ GLC+ G  + A+R ++++       + V++
Sbjct: 271 GRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTH 330

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N +L   C  G+ +E+ EL   M G +   T+V+YNILI  L  +GK + A+ + + + K
Sbjct: 331 NAMLNGFCRAGKIKESFELWMVM-GKENCQTVVSYNILIKGLFENGKVEEAISIWELLCK 389

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQE 395
              RP + +Y  +I  LC  G+++  +K   +      K +   Y+ +   LC  G++ E
Sbjct: 390 KGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDE 449

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A +I+  +  +           +I    R  K   A     EM   G +P   +Y++LI+
Sbjct: 450 AISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIK 509

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GLC      EA      M E ++KPD+   + L+ GLC+ ++ +++L ++Q  ++KG  P
Sbjct: 510 GLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKP 569

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           + T Y IL+ G+    +LE + ++   ++    V        +M+
Sbjct: 570 DITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLME 614



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 205/436 (47%), Gaps = 5/436 (1%)

Query: 112 NKMK-KAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           NKM  KA+   + M    G  P   SY  L+N   +      A       E      N  
Sbjct: 93  NKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQ 152

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TYN L++  C    + +++  LD +  + L P+ F+Y  L+    K   +  A+K+ D++
Sbjct: 153 TYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEM 212

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF-RDLPSKGFEPNVVSYNILLRSLCMEGR 288
             +G   ++  YN+L+ G  K G  ++    + R +      PNVV+YNI++  LC  GR
Sbjct: 213 SVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGR 272

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
           ++E+ E+   M   +R   + TY+ LI  L   G  D A++V  E+V+      A ++N 
Sbjct: 273 FDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNA 332

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           ++   C  GK+    +    M    C+    +YN L   L   GKV+EA +I + L  K 
Sbjct: 333 MLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKG 391

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                  Y  +I  LC+ G+  +A ++  E        D+Y YSS++ GLC EG ++EA+
Sbjct: 392 CRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAI 451

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            I   M++  YK D    N L+ G  ++ + + ++  F+ M  KG  P   +Y  L++G+
Sbjct: 452 SIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGL 511

Query: 528 AHQDELELSAEVLKEL 543
              +    +   +KE+
Sbjct: 512 CKAERFSEAYSFVKEM 527



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 193/398 (48%), Gaps = 4/398 (1%)

Query: 152 AMQLVEKMED-YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
           A+   + M+D +G      +YN+L+     L   +++  F        + PN  TY+ L+
Sbjct: 99  ALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILI 158

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           + + K++ +  A+ LLD + ++  KP++ SY  L+ G+ K G    A++ F ++  +G  
Sbjct: 159 KISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVV 218

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            +V  YN+L+      G +++  E+   +       P +VTYNI+I  L   G+ D +L+
Sbjct: 219 ADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLE 278

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLC 388
           + + M K        +Y+ +I  LC  G +D  V+   ++       +  T+N  L   C
Sbjct: 279 IWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFC 338

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             GK++E+F +   +G K+N      Y  +I  L   GK  +A  +   + K G  P+S 
Sbjct: 339 RAGKIKESFELWMVMG-KENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPEST 397

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY  LI GLC  G + +AL+IF   E+   K D   +++++ GLCK  R D ++ +   M
Sbjct: 398 TYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQM 457

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++G   +      L+ G     +LE +    +E++ +
Sbjct: 458 DKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK 495



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 154/307 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    E +  KG +P+      L++ LCK  ++ KA+K+ +         DA +Y+
Sbjct: 376 KVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYS 435

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V+ LCK+G +  A+ +V +M+  GY  +    N L+ G      L  ++ F   +  K
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK 495

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   +Y+ L++   K      A   + +++ K  KP++++ ++L+ GLC+E + E A
Sbjct: 496 GCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMA 555

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  ++    KGF+P++  YNIL+  LC   + E+A +L + M      P +VT N L+  
Sbjct: 556 LNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEG 615

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L      + A ++ D ++K    P   SYN  I  LCS  ++   ++ L+   +R   P 
Sbjct: 616 LYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPT 675

Query: 378 EGTYNGL 384
             T+N L
Sbjct: 676 AVTWNIL 682



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 108/208 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL DA      M  KG  P +V    L+  LCKA +  +A   ++ M+     PD  
Sbjct: 478 RASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMI 537

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L++ LC++  +  A+ L ++  D G+  +   YN L+ GLC +  L  +LQ    +
Sbjct: 538 TCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHM 597

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +   VPN  T + L+E  YK R    A ++ D I+  G  P+++SYN+ + GLC   R 
Sbjct: 598 KRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRI 657

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            +AI F  D  ++G  P  V++NIL+R+
Sbjct: 658 SDAIEFLNDALNRGILPTAVTWNILVRA 685



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 77/147 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+  A    ++ + KG KPD+     L++ LC   K++ A+++   M  S  +
Sbjct: 544 DGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCV 603

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +   L+  L K  +   A ++ + +   G   + ++YN  ++GLC    ++ +++F
Sbjct: 604 PNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEF 663

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKER 217
           L+  + +G++P A T++ L+ AA   R
Sbjct: 664 LNDALNRGILPTAVTWNILVRAAVNFR 690


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 236/474 (49%), Gaps = 5/474 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +++ A      M+ +G  P ++   +++ +LCK  +M KA  +++ MV SGI PD  
Sbjct: 222 KDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLF 281

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++ LCK   +  A +++E+M + G   N++TYNSL+ G  + G  N+S++   ++
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G++P     +  + A +K    + A  + D ++ KG KP+++SY+   + +C    T
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVT 401

Query: 255 EEAIRF---FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
              + +   F  + +KG  PN   +NIL+ +    G  ++A  +  +M      P  VT+
Sbjct: 402 VVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 461

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             +I SL   G+ D AL   + MV     PS A Y  +I   C+ G++    + + +M +
Sbjct: 462 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN 521

Query: 372 RRCKPNEGTY--NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +   P    Y  + +  LC  G+V E   I+  +           +  ++   C  G   
Sbjct: 522 KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNME 581

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +AF LL  M   G  P+ Y Y +L+ G C  G I++AL +F  M     KP    ++ +L
Sbjct: 582 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 641

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            GL ++RRT  + ++F  MIE G   +  TY +++ G+   +  + +  +L++L
Sbjct: 642 HGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 695



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/503 (24%), Positives = 233/503 (46%), Gaps = 44/503 (8%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLC--KANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           F +++R     H P  +   N+L D C  + ++    + ++  ++ +G+ PD  SY+ L+
Sbjct: 160 FKRMDRWACPRHSPPTIHTYNILID-CYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LI 217

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
               K G V  A  L  +M + G     +  NS+++ LC +  ++++   + +++  G+ 
Sbjct: 218 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 277

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ FTYS +++   K + +  A ++L+ ++  G +PN ++YN L+ G    G   E++R 
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY--------- 311
           F+ + S G  P V + N  + +L   GR  EA  +   M      P I++Y         
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY 397

Query: 312 -----------------------------NILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
                                        NILI + A  G  D A+ + ++M      P 
Sbjct: 398 WYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 457

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
             ++  +I+ LC  G++D  +   + M      P+E  Y  L    C  G++ +A  +I 
Sbjct: 458 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 517

Query: 402 SLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            + NK    P  +++  +I +LC++G+  +   ++  M + G  P+  T++SL+ G C+ 
Sbjct: 518 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 577

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G +EEA  +   M     +P+   +  L+ G CK+ R D +L VF+ M+ KG  P    Y
Sbjct: 578 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 637

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
           +I++ G+        + ++  E+
Sbjct: 638 SIILHGLFQARRTTAAKKMFHEM 660



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+DA  +   MV  G  P       L+   C   ++ KA +++  M++  I P   
Sbjct: 470 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 529

Query: 135 SY-TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y + ++N LCK+G V     +++ M   G   N VT+NSL+ G C++GN+ ++   LD 
Sbjct: 530 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 589

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G+ PN + Y  L++   K   +  A+ +  D++ KG KP  V Y+++L GL +  R
Sbjct: 590 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 649

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A + F ++   G   ++ +Y ++L  LC     +EAN LL ++   +    I+T+NI
Sbjct: 650 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 709

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           +I ++   G+   A ++ D +      P+  +Y+ +I  L  E
Sbjct: 710 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 752



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/556 (20%), Positives = 227/556 (40%), Gaps = 76/556 (13%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +++MV  G  PD+   + ++  LCK+  M KA +V+E MV +G  P++ +Y  L++    
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI---------- 195
            G    ++++ ++M   G        NS +  L   G  N++    D ++          
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 196 ----------------------------QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
                                        KG+ PN   ++ L+ A  +   +  AM + +
Sbjct: 388 YSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 447

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           D+  KG  P+ V++  +++ LC+ GR ++A+  F  +   G  P+   Y  L++  C  G
Sbjct: 448 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 507

Query: 288 RWEEANELLAEMDGGDRSPTIVTY-NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
              +A EL++EM   D  P  V Y + +I +L   G+      ++D MV+   RP+  ++
Sbjct: 508 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTF 567

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL-- 403
           N ++   C  G ++     LD M     +PN   Y  L    C  G++ +A  + + +  
Sbjct: 568 NSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLH 627

Query: 404 -------------------GNKQNSSPQEF--------------YKYVITSLCRKGKTYQ 430
                                +  ++ + F              Y  V+  LCR   T +
Sbjct: 628 KGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDE 687

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL ++       D  T++ +I  +   G  +EA E+F  +  Y   P++  ++ ++ 
Sbjct: 688 ANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMIT 747

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
            L K    + +  +F  + + G   +      +V  + ++ E+  ++  L  +    +  
Sbjct: 748 NLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTL 807

Query: 551 E-SAVERLVMQYDFEG 565
           E S +  L   +  EG
Sbjct: 808 EASTISLLASLFSREG 823



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 7/261 (2%)

Query: 36  SLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHK 95
           ++ + F  + A   + I P   +Y       G   D   ++ +++DA      M+ KG K
Sbjct: 579 NMEEAFALLDAMASIGIEPNCYIY-------GTLVDGYCKNGRIDDALTVFRDMLHKGVK 631

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P  V  + +L+ L +A +   A K+   M+ SG      +Y  ++  LC+      A  L
Sbjct: 632 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 691

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +EK+       + +T+N ++  +  +G   ++ +  D +   GLVPN  TYS ++    K
Sbjct: 692 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 751

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           E     A  L   +   G   +    N ++  L  +    +A  +   +          +
Sbjct: 752 EESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEAST 811

Query: 276 YNILLRSLCMEGRWEEANELL 296
            ++L      EG++ E  +LL
Sbjct: 812 ISLLASLFSREGKYREHIKLL 832


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 215/441 (48%), Gaps = 3/441 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+  L KA  + +A  + +   ++G   D  +YT +V+ L K   +  A+ L+EK+   G
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
                 TYN+L+ GLC +G L +++  L +++  G  P+  TY+ L++   K++    A 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           KL  ++ ++G   + V Y  L+ GL + G+  +A   ++ + S+G  P+VV+ + ++  L
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  GR   A  +   M+    +P  V Y+ LI  L    K D AL++L +M K    P  
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQS 402
            +YN +I  LC  G V       D+M    CKP+  TYN L +  C  G    A  +   
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + + + S     Y  +I+ LC++ +  +A      M + G  PDS+ YSSL+ GLC  G 
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +E    +F  ME      +      L+  LCK+ R D ++ +F  + ++G MP+   Y  
Sbjct: 365 LEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNS 422

Query: 523 LVEGIAHQDELELSAEVLKEL 543
           ++  +    ++     V +E+
Sbjct: 423 IISALIKSGKVNEGQAVYQEM 443



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 190/401 (47%), Gaps = 3/401 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   +E++ + G  P +     LL  LCK  ++++AI ++  +V +G  
Sbjct: 42  DWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 101

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L++ L KK     A +L ++M   G   +TV Y +L+RGL   G + Q+   
Sbjct: 102 PDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSV 161

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  +G VP+  T S +++   K   + AA+++   + A+G  PN V Y+ L+ GLCK
Sbjct: 162 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 221

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + + A+     +      P+ ++YNIL+  LC  G    A     EM      P + T
Sbjct: 222 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYT 281

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNILI      G TD A  V D+M   R  P+  +Y  +I+ LC   ++         M 
Sbjct: 282 YNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMK 341

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            R C P+   Y+ L   LC  GK++    +   +     ++ Q   + +I  LC+  +  
Sbjct: 342 ERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTR-LIFHLCKANRVD 400

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           +A  L   + K G  P  Y Y+S+I  L   G + E   ++
Sbjct: 401 EAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVY 440



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 177/393 (45%), Gaps = 3/393 (0%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T++ L+ GL   G L Q+          G   +  TY+ +++   K + +  A+ L++ I
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
            A G  P + +YN LL GLCK GR EEAI   R +   G  P+VV+Y  L+  L  + R 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            EA +L  EM     +   V Y  LI  L   GK   A  V   M      P   + + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I  LC  G++   V+    M  R   PNE  Y+ L   LC   K+  A  ++  +  K  
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM-KKAF 239

Query: 409 SSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            +P    Y  +I  LC+ G    A     EM + G  PD YTY+ LI G C  G  + A 
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +F  M      P+V  +  L+ GLCK R+   +   +Q M E+G  P+   Y+ LV+G+
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
               +LE    +  E++   V +     RL+  
Sbjct: 360 CKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH 392


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 221/464 (47%), Gaps = 7/464 (1%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F  L R   +G  PD V  + L+  L K +++  A+ +++ M + G+  DA  Y  L++ 
Sbjct: 181 FSSLRR---RGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSG 237

Query: 143 LCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             + G    AM++ E++  D G   N  TY  ++ GLC LG   ++ +   R++      
Sbjct: 238 CFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQA 297

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY  L+    +   V +A ++  D++  G   ++  YN L+ G C+ GRT EA +F+
Sbjct: 298 DTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFW 357

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG-GDRSPTIVTYNILIGSLAY 320
                 G    + +YNI+ + L   G   EA ELL +++     SP  VT+  LI  L  
Sbjct: 358 DSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCE 416

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           +G  + A ++L++           SY+ +I R C +G+     +    M    CKPN   
Sbjct: 417 NGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHV 476

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN L    C V K+ +A  I   + +         Y  +I  LC+  K  +A  L  EM 
Sbjct: 477 YNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEML 536

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + GF PD  TY+SLIRGLC +  ++ AL I+  + +   + DV   N L+ GLC + + D
Sbjct: 537 ERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVD 596

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +  ++  M EK   PN  TY  L++G      ++ +A +   +
Sbjct: 597 EAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAI 640



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 216/469 (46%), Gaps = 10/469 (2%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG----IIPDASSYT 137
           AF  L  ++  G  P V     LL    +A +   A      +        I P+  +Y 
Sbjct: 105 AFRDLPSLL--GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYN 162

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC +G+V  A+ L   +   G   + VTY++L+ GL     L+ +L  LD +   
Sbjct: 163 IILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNY 222

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-GGKPNLVSYNVLLTGLCKEGRTEE 256
           G+  +A  Y+ LL   ++      AMK+ + ++   G  PNL +Y V+L GLCK GR +E
Sbjct: 223 GVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKE 282

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   +  + +   + + V+Y IL+  LC  G  + A  + ++M        +  YN LI 
Sbjct: 283 AGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIK 342

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH-RRCK 375
                G+T  A K  D       R    +YN +   L   G V    + L Q+ +   C 
Sbjct: 343 GFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCS 401

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P++ T+  L   LC  G    AF I++   N         Y  +I   C+ G+T+ A ++
Sbjct: 402 PDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEV 461

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M K G  P+S+ Y++LI G C    I +A++I++ M      P +  +N L+ GLCK
Sbjct: 462 YKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCK 521

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + +   +  + + M+E+G  P+  TY  L+ G+    +++++  +  E+
Sbjct: 522 AEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEI 570



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 198/437 (45%), Gaps = 3/437 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P++     +L  LCK  + K+A +V   M+++    D  +Y  L++ LC+ G+V  A
Sbjct: 259 GASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSA 318

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            ++   M   G   +   YNSL++G C +G   ++ +F D     G +    TY+ + + 
Sbjct: 319 ARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKG 377

Query: 213 AYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
                 V  A +LL  +       P+ V++  L+ GLC+ G    A     D  + G E 
Sbjct: 378 LLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEEL 437

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +V SY+ ++   C +GR  +ANE+   M      P    YN LI       K + A+K+ 
Sbjct: 438 DVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIY 497

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
            EM      P+  +YN +I  LC   K         +M  R  KP+  TY  L   LC  
Sbjct: 498 IEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRD 557

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
            KV  A  I   + +         +  +I  LC  GK  +AF +  EM +   +P+  TY
Sbjct: 558 KKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTY 617

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++L+ G    G I++A  ++  + +   KPD+  +N  + GLC   RT   + +   ++ 
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677

Query: 511 KGQMPNETTYTILVEGI 527
            G MP   T++ILV  +
Sbjct: 678 TGIMPTVITWSILVRAV 694



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 189/413 (45%), Gaps = 36/413 (8%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM++  H+ D V    L++ LC++  +  A +V   MV +G++ D S Y  L+   C+ G
Sbjct: 289 RMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVG 348

Query: 148 NVGYAM----------------------------------QLVEKME-DYGYPTNTVTYN 172
             G A                                   +L++++E D     + VT+ 
Sbjct: 349 RTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFG 408

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           +L+ GLC  G  N++ + L+     G   + F+YS ++    K+   H A ++  +++  
Sbjct: 409 TLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD 468

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KPN   YN L+ G C+  +  +AI+ + ++ S G  P +++YN L+  LC   +++EA
Sbjct: 469 GCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEA 528

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
           + L  EM      P I TY  LI  L    K D AL++ DE++    +     +N +I  
Sbjct: 529 SSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHG 588

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP 411
           LCS GKVD       +M  + C PN  TYN L      +G + +A ++  ++ +      
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPD 648

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
              Y   I  LC   +T +   LL E+   G  P   T+S L+R +   G I+
Sbjct: 649 IVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 142/282 (50%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           N AF  LE   + G + DV   ++++   CK  +   A +V + MV  G  P++  Y  L
Sbjct: 421 NRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNAL 480

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N  C+   +  A+++  +M   G     +TYN+L+ GLC      ++      ++++G 
Sbjct: 481 INGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGF 540

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ L+    +++ V  A+++ D+I+  G + +++ +N+L+ GLC  G+ +EA  
Sbjct: 541 KPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFC 600

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            + ++  K   PN+V+YN L+      G  ++A  L   +      P IVTYN  I  L 
Sbjct: 601 IYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLC 660

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +T   + +L+E++     P+  +++ ++  +   G + +
Sbjct: 661 SCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQI 702



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 161/351 (45%), Gaps = 16/351 (4%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +V +AF+ + + +AA       AA + L  ++  G  P + S+N LL    +  R  +A 
Sbjct: 88  VVLSAFSRALMPDAAL------AAFRDLPSLL--GCNPGVRSHNTLLDAFVRARRYSDAD 139

Query: 259 RFFRDLPSKGF----EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            FF  L    F     PN+ +YNI+LRSLC  G  + A  L + +     +P  VTY+ L
Sbjct: 140 AFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTL 199

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-R 373
           +  LA H + D+AL +LDEM     +  A  YN +++     G  +  +K  +Q+     
Sbjct: 200 MSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPG 259

Query: 374 CKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             PN  TY   L  LC +G+ +EA  +   +    + +    Y  +I  LCR G    A 
Sbjct: 260 ASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAA 319

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++  +M K G   D   Y+SLI+G C  G   EA + F     +     +  +N +  GL
Sbjct: 320 RVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWK-FWDSTGFSGIRQITTYNIMTKGL 378

Query: 493 CKSRRTDLSLEVF-QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             S     + E+  Q+  +    P++ T+  L+ G+        + E+L++
Sbjct: 379 LDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 126/248 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D + +DA    + MV  G KP+      L+   C+ +K+  AIK+   M S+G  P   
Sbjct: 451 KDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTII 510

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK      A  L ++M + G+  +  TY SL+RGLC    ++ +L+  D +
Sbjct: 511 TYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEI 570

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GL  +   ++ L+        V  A  +  ++  K   PNLV+YN L+ G  + G  
Sbjct: 571 LDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSI 630

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A   +  +   G +P++V+YN  ++ LC   R  E   LL E+      PT++T++IL
Sbjct: 631 DKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSIL 690

Query: 315 IGSLAYHG 322
           + ++  +G
Sbjct: 691 VRAVIKYG 698



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 8/309 (2%)

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           V+L+   +    + A+  FRDLPS  G  P V S+N LL +     R+ +A+   A +  
Sbjct: 88  VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSH 147

Query: 302 GDR----SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           G      +P + TYNI++ SL   G  D A+ +   + +    P   +Y+ +++ L    
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQ-EFY 415
           ++D  +  LD+M +   + +   YN L   C   G  ++A  + + L     +SP    Y
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATY 267

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           K ++  LC+ G+  +A ++   M       D+ TY  LI GLC  G ++ A  ++  M +
Sbjct: 268 KVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK 327

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
                DV  +N+L+ G C+  RT  + + +      G +   TTY I+ +G+     +  
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSE 386

Query: 536 SAEVLKELQ 544
           + E+LK+L+
Sbjct: 387 ATELLKQLE 395


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 232/478 (48%), Gaps = 2/478 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++   S G KPDV   T ++  LC          V+  M   G+ P   ++  L+N LC 
Sbjct: 30  IKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCA 89

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF- 204
           +GNVG A +  + +ED GY +N+ T+ +++ GLC +G+   ++ +L+++  +    +   
Sbjct: 90  EGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLI 149

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            YS ++++  K+  +  A+     +  KG +P+LV+YN L+ GLC  GR  EA     ++
Sbjct: 150 AYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNM 209

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             KG  PNV ++N+L+ + C EG+   A  ++  M      P +VTYN +I       + 
Sbjct: 210 MRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQM 269

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + A+KV + M+     P+  +Y+ +I   C    ++  +  LD+M +     +  T++ L
Sbjct: 270 NDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTL 329

Query: 385 -AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C  G+ + A  +  ++         +    ++  L +     +A  L  +M K   
Sbjct: 330 IGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNL 389

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             +  TY+ ++ G+C  G   +A E+F  +     + DV  +  ++ GLCK    D + +
Sbjct: 390 ELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAED 449

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +   M E G  PNE TY +LV G+  + ++  S + L  ++ + + +++    L++ Y
Sbjct: 450 LLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLISY 507



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 209/456 (45%), Gaps = 8/456 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            F  L  M   G +P VV    L+  LC    +  A +  + +   G   ++ ++  ++N
Sbjct: 61  GFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIIN 120

Query: 142 CLCKKGNVGYAMQLVEKME--DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
            LCK G+   A+  +EK+E  + G+    + Y++++  LC  G L  +L F   +  KG+
Sbjct: 121 GLCKVGDTAGAISYLEKIEGRNRGFDL-LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGI 179

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+   Y+ L+         + A  LL +++ KG  PN+ ++NVL+   CKEG+   A  
Sbjct: 180 QPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKT 239

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               +   G EP+VV+YN ++   C+  +  +A ++   M      P +VTY+ LI    
Sbjct: 240 IMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWC 299

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                + A+ VLDEMV         +++ +I   C  G+ +  ++    M      PN  
Sbjct: 300 KTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQ 359

Query: 380 TYNGLAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           T     +L G+ K Q   EA ++ + +           Y  V+  +C  GK   A +L  
Sbjct: 360 TCA--IILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFS 417

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            +   G   D   Y+++I+GLC EGL+++A ++ + MEE    P+   +N L+ GL +  
Sbjct: 418 CLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRY 477

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
               S +   +M  KG   + TT  +L+   +   E
Sbjct: 478 DISRSTKYLMLMKGKGLSADATTTELLISYFSANKE 513



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 159/300 (53%), Gaps = 1/300 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K++ A   +  MV  G +PDVV   +++   C  ++M  A+KV E+M+  G++
Sbjct: 226 DNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLL 285

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++  CK  N+  A+ ++++M + G   + VT+++L+ G C  G    +++ 
Sbjct: 286 PNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIEL 345

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + +   +PN  T + +L+  +K +    A+ L   +     + N+V+YN++L G+C 
Sbjct: 346 FCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCS 405

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  +A   F  LPSKG + +VV+Y  +++ LC EG  ++A +LL +M+     P   T
Sbjct: 406 FGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFT 465

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN+L+  L        + K L  ++KG+   + A+   ++    S  K +  ++   Q F
Sbjct: 466 YNVLVRGLLQRYDISRSTKYL-MLMKGKGLSADATTTELLISYFSANKENSALQVFLQKF 524



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 139/277 (50%), Gaps = 2/277 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           + N+A   L  M+ KG  P+V Q  N+L D  CK  K+ +A  +M  MV  G+ PD  +Y
Sbjct: 198 RWNEATTLLGNMMRKGIMPNV-QTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTY 256

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +++  C    +  A+++ E M   G   N VTY+SL+ G C   N+N+++  LD ++ 
Sbjct: 257 NSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVN 316

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            GL  +  T+S L+    K     AA++L   +      PNL +  ++L GL K     E
Sbjct: 317 NGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSE 376

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           AI  FR +     E N+V+YNI+L  +C  G++ +A EL + +        +V Y  +I 
Sbjct: 377 AISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIK 436

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L   G  D A  +L +M +    P+  +YN ++  L
Sbjct: 437 GLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 140/340 (41%), Gaps = 37/340 (10%)

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L     K +    A+ L+    + G KP++ +  +++  LC    T         + 
Sbjct: 10  FATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMF 69

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G EP VV++  L+  LC EG    A      ++         T+  +I  L   G T 
Sbjct: 70  KIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTA 129

Query: 326 HALKVLDEMVKGRFR--PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            A+  L E ++GR R      +Y+ I+  LC +G + L +     M  +  +P+   YN 
Sbjct: 130 GAISYL-EKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNS 188

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L                                  I  LC  G+  +A  LL  M + G 
Sbjct: 189 L----------------------------------IHGLCSFGRWNEATTLLGNMMRKGI 214

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+  T++ L+   C EG I  A  I   M     +PDV  +N+++ G C   + + +++
Sbjct: 215 MPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVK 274

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           VF++MI KG +PN  TY+ L+ G      +  +  VL E+
Sbjct: 275 VFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEM 314


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 222/461 (48%), Gaps = 3/461 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MVS+G   D+V  T L+  L K  K  +    +   +S  + P+  +YT L++ LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             NV  A Q++ +ME+     N VT++S++ G    G L+++ ++   + ++G+ PN  T
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L++  +K +G  AA+++  D++ +G K N    + L+ GL + G+ EEA+  F+D  
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G   + V+Y  L+  L   G    A +   E+   +  P  V YN+ I  L   GK  
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A   L EM     +P  ++YN +I   C +G+    +K L +M     KPN  TYN L 
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE-MTKYGF 443
           A L G G V++A  ++  + +    SP       +   C + +       ++E M   G 
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVSA-GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGL 690

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D   Y++L++ LC  G+  +A  +   M      PD   FNAL+LG CKS   D +  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +  M+ +   PN  T+  L+ G+     +  +  VL E++
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 214/475 (45%), Gaps = 1/475 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +RM ++G   DVV    L+   C+A ++  A  V++MM  +G+ P+ ++YT  +   C+ 
Sbjct: 193 DRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A  L E M   G   + VT ++LV GLC  G  +++      + + G  PN  TY
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY 312

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L+++  K       + LL +++++G   +LV+Y  L+  L K+G+T+E     R   S
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               PN V+Y +L+ +LC     +EA ++L EM+    SP +VT++ +I      G  D 
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A +    M +    P+  +Y  +I         D  ++    M     K N+   + L  
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVN 492

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            L   GK++EA A+ +       S     Y  +I  L + G    AF+   E+      P
Sbjct: 493 GLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLP 552

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D+  Y+  I  LCM G  +EA      M     KPD   +N +++  C+   T  +L++ 
Sbjct: 553 DAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL 612

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
             M      PN  TY  LV G+     +E +  +L E+        S   R V+Q
Sbjct: 613 HEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 218/472 (46%), Gaps = 5/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   + +AF   E MV  G   DVV  + L+  LC+  +  +A  +   M   G  P+  
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L K G     + L+ +M   G   + VTY +L+  L   G  ++    L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   L PN  TY+ L++A  K   V  A ++L ++  K   PN+V+++ ++ G  K G  
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYN 312
           ++A  + R +  +G  PNVV+Y  L+         + A E+  +M  +G   +  IV  +
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV--D 488

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+  L  +GK + A+ +  +           +Y  +I  L   G +    K   ++  R
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 373 RCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+   YN  +  LC +GK +EA + +  + N      Q  Y  +I S CRKG+T +A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL+EM      P+  TY++L+ GL   G +E+A  +   M    + P       +L  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +SRR D+ L++ + M+  G   + T Y  L++ + +      +  VL+E+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 221/479 (46%), Gaps = 1/479 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + H +++A   L  M  K   P+VV  ++++    K   + KA +   MM   GI 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++   K      A+++   M   G   N    +SLV GL   G + +++  
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
                  GL  +   Y+ L++  +K   +  A K   +++ +   P+ V YNV +  LC 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EA  F  ++ + G +P+  +YN ++ S C +G   +A +LL EM      P ++T
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN L+  L   G  + A  +L+EMV   F PS+ ++  ++       ++D+++   + M 
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +     +   YN  L +LC  G  ++A  +++ +     +     +  +I   C+     
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF    +M     +P+  T+++L+ GL   G I EA  + + ME+   +P+   ++ L 
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            G  K      ++ ++  M+ KG +P  +TY  L+        +  + E+ K++Q R V
Sbjct: 807 TGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 204/447 (45%), Gaps = 35/447 (7%)

Query: 81  DAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           DA L++   M+ +G K +     +L+  L +  K+++A+ + +    SG+  D  +YT L
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++ L K G++  A +  +++ D     + V YN  +  LCMLG   ++  FL  +   GL
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ ++ +  ++     A+KLL ++     KPNL++YN L+ GL   G  E+A  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              ++ S GF P+ +++  +L++     R +   ++   M        I  YN L+  L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
           YHG T  A  VL+EM+     P   ++N +I   C    +D       QM H+   PN  
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           T+N L  L G+  V                                G+  +A  +L EM 
Sbjct: 766 TFNTL--LGGLESV--------------------------------GRIGEAGTVLIEME 791

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           K G  P++ TY  L  G   +    EA+ ++  M    + P V  +NAL+    K+    
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEG 526
            + E+F+ M ++G  P   TY ILV G
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 172/385 (44%), Gaps = 5/385 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +A    +     G   D V  T L+  L KA  M  A K  + ++   ++PDA 
Sbjct: 496 QNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y   +NCLC  G    A   + +M + G   +  TYN+++   C  G   ++L+ L  +
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               + PN  TY+ L+   +    V  A  LL+++++ G  P+ +++  +L    +  R 
Sbjct: 616 KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +  +     + + G   ++  YN LL+ LC  G   +A  +L EM G   +P  +T+N L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I         D+A     +M+     P+ A++N ++  L S G++      L +M     
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 375 KPNEGTYNGLAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           +PN  TY+ LA   G GK     EA  +   +  K        Y  +I+   + G   QA
Sbjct: 796 EPNNLTYDILA--TGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRG 456
            +L  +M K G  P S TY  L+ G
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 195/473 (41%), Gaps = 76/473 (16%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LLY  C+   ++ AI ++    SS   P   +Y  L+  L       +A  ++ +M   G
Sbjct: 79  LLYSHCRLRLLRPAIALLR---SSR--PTTVAYNILLAALSDHA---HAPAVLAEMCKRG 130

Query: 164 YPTNTVTYNSLVRGL----------------------------------CMLGNLNQSLQ 189
            P + VT N+L+ GL                                  C +G+   +L 
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALS 190

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             DR+  +GL  +   Y+ L+    +   V AA  +LD +   G  PN+ +Y   +   C
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           +    EEA   +  +   G   +VV+ + L+  LC +GR+ EA  L  EMD    +P  V
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  LI SLA  G+    L +L EMV         +Y  ++  L  +GK D V   L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 PN  TY  L                                  I +LC+     
Sbjct: 371 LSDNLSPNGVTYTVL----------------------------------IDALCKAHNVD 396

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A Q+L EM +   +P+  T+SS+I G    GL+++A E   +M+E    P+V  +  L+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            G  K +  D +LEV+  M+ +G   N+     LV G+    ++E +  + K+
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKD 509



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 129/318 (40%), Gaps = 16/318 (5%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+  L   G    AIRF    P+        S N LL S C       A  LL       
Sbjct: 52  LIPALATSGLAAAAIRFRPADPA--------SLNALLYSHCRLRLLRPAIALLRS----- 98

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             PT V YNIL+ +L+ H    HA  VL EM K        + N ++A LC  G+VD   
Sbjct: 99  SRPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
              D+          G    +A  C VG    A ++   +  +        Y  ++   C
Sbjct: 156 ALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R G+   A  +L  M + G  P+  TY+  I   C    +EEA +++  M       DV 
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +AL+ GLC+  R   +  +F+ M + G  PN  TY  L++ +A     +    +L E+
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 544 QLRQVVSESAVERLVMQY 561
             R VV +      +M +
Sbjct: 336 VSRGVVMDLVTYTALMDW 353



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 65/140 (46%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   L++AF    +M+ +   P++     LL  L    ++ +A  V+  M  SG+ P+  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L     K+ N   AM+L  +M   G+     TYN+L+      G + Q+ +    +
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 195 IQKGLVPNAFTYSFLLEAAY 214
            ++G+ P + TY  L+   Y
Sbjct: 861 QKRGVHPTSCTYDILVSGWY 880


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 220/474 (46%), Gaps = 19/474 (4%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M++     + V   N    LC   K   A +++++M+  G +PD S+Y+ ++  LC+ 
Sbjct: 242 EEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEA 301

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A  L ++M+  G   +  TY  L+   C  G + Q+  + D +   G   N  TY
Sbjct: 302 MKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTY 361

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR------- 259
           + LL A  K + +  A  + + +I  G  PN ++Y+ L+ GLCK G  ++A         
Sbjct: 362 TALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIG 421

Query: 260 ---------FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
                    +F    +    PNVV+Y  L+  LC   +  +A ELL  M      P  + 
Sbjct: 422 TSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHII 481

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI      GK D+A +V   M K  + P+  +Y  +I  +  + ++DL +K L QM 
Sbjct: 482 YDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMV 541

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C PN  TY  +   LC +G+ Q+A  ++  +  K  S     Y  +I  L + GK  
Sbjct: 542 ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVD 601

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            + QL  +M+  G  P+  TY  LI   C  GL++EA  +   M++  +   +  + +++
Sbjct: 602 LSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVV 661

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G   S++   SL + + +   G +P    Y +L++  +    LE + E+ KE+
Sbjct: 662 QGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEM 713



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 224/470 (47%), Gaps = 22/470 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  AFL  + M S G  PDV   T L+   CKA  +++A    + M S G   +  +YT
Sbjct: 303 KVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYT 362

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI-- 195
            L++   K   +  A  +  +M D G P NT+TY++LV GLC  G + ++ +   +LI  
Sbjct: 363 ALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGT 422

Query: 196 --------------QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
                            + PN  TY  L++   K   V  A +LLD +++ G +PN + Y
Sbjct: 423 SDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIY 482

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + L+ G CK G+ + A   F  +   G+ P V +Y  L+ ++  + R + A ++L++M  
Sbjct: 483 DALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE 542

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P +VTY  +I  L   G+   ALK+L  M +    P+  +Y  +I  L   GKVDL
Sbjct: 543 SSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDL 602

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            ++   QM  + C PN  TY  L    C  G + EA +++  +  KQ   P+    Y   
Sbjct: 603 SLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM--KQTYWPKYLQGYCSV 660

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
                 K   +  LL E+  +G  P +  Y  LI      G +EEALE+   M E     
Sbjct: 661 VQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSL 720

Query: 481 DV---DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++   D + +L+  LC + + + + E++  +  KG +P  + +  L++G+
Sbjct: 721 NITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGL 770



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 231/502 (46%), Gaps = 32/502 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K + AF  ++ M+ KG  PD    + ++  LC+A K++KA  + + M S G+ PD  +YT
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK G +  A    ++M   G   N VTY +L+        L Q+    +R+I  
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG----------GK------PNLVSY 241
           G  PN  TYS L++   K   +  A ++   +I             GK      PN+V+Y
Sbjct: 388 GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTY 447

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             L+ GLCK  +  +A      + S G EPN + Y+ L+   C  G+ + A E+   M  
Sbjct: 448 GALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK 507

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               PT+ TY  LI ++    + D A+KVL +MV+    P+  +Y  +I  LC  G+   
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQK 567

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +K L  M  + C PN  TY  L    G  GKV  +  +   +  K  +     Y+ +I 
Sbjct: 568 ALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLIN 627

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME-----GLIEEALEIFVVMEE 475
             C  G   +A  LL EM +  +      Y S+++G   +     GL+EE       +E 
Sbjct: 628 HCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEE-------LES 680

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT---YTILVEGIAHQDE 532
           +   P    +  L+    K+ R + +LE+ + M+E     N T+   YT L++ +    +
Sbjct: 681 HGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQ 740

Query: 533 LELSAEVLKELQLRQVVSESAV 554
           LE + E+  E+  + VV E +V
Sbjct: 741 LEKAFELYSEITRKGVVPELSV 762



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/540 (23%), Positives = 226/540 (41%), Gaps = 91/540 (16%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            ++A   L RM      P+VV    LL    K  ++    +++ MM+  G  P+ S +  
Sbjct: 123 FDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNS 182

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV----------------------- 175
           LV+  C   +  YA +L+++M D G P   V YN  +                       
Sbjct: 183 LVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYE 242

Query: 176 ------------------RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
                             R LC +G  + + Q +  ++ KG VP+  TYS ++    +  
Sbjct: 243 EMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAM 302

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            V  A  L  ++ + G  P++ +Y +L+   CK G  E+A  +F ++ S G   NVV+Y 
Sbjct: 303 KVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYT 362

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-- 335
            LL +     +  +A+++   M      P  +TY+ L+  L   G+   A +V  +++  
Sbjct: 363 ALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGT 422

Query: 336 ----------KGR----FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
                     +G+      P+  +Y  +I  LC   KV    + LD M    C+PN   Y
Sbjct: 423 SDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIY 482

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
           + L                                  I   C+ GK   A ++   M+K 
Sbjct: 483 DAL----------------------------------IDGFCKVGKIDNAQEVFLRMSKC 508

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G+ P  +TY+SLI  +  +  ++ A+++   M E    P+V  + A++ GLC+      +
Sbjct: 509 GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKA 568

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           L++  MM EKG  PN  TYT L++G+    +++LS ++  ++  +         R+++ +
Sbjct: 569 LKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINH 628



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 197/405 (48%), Gaps = 24/405 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG----------------I 129
             RM+  G  P+ +  + L+  LCKA +++KA +V   ++ +                 I
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSI 440

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  +Y  L++ LCK   V  A +L++ M   G   N + Y++L+ G C +G ++ + +
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQE 500

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              R+ + G +P   TY+ L++A +K+R +  AMK+L  ++     PN+V+Y  ++ GLC
Sbjct: 501 VFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLC 560

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           + G  ++A++    +  KG  PNVV+Y  L+  L   G+ + + +L  +M     +P  V
Sbjct: 561 RIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYV 620

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY +LI      G  D A  +L EM +  +      Y  ++     +    L +  L+++
Sbjct: 621 TYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGL--LEEL 678

Query: 370 FHRRCKPNEGTYNGLAM--LCGVGKVQEAFAI---IQSLGNKQNSSPQEFYKYVITSLCR 424
                 P    Y GL +      G+++EA  +   +  L +  N + ++ Y  +I +LC 
Sbjct: 679 ESHGTVPIAPVY-GLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCL 737

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
             +  +AF+L  E+T+ G  P+   +  LI+GL       EAL++
Sbjct: 738 ASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQL 782



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 131/562 (23%), Positives = 220/562 (39%), Gaps = 102/562 (18%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G++P       L+  L  A +M    +V + M  SG   D  +       LCK+G    A
Sbjct: 35  GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDA 94

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + ++E+ ED  +  +TV    ++ GL      ++++ FL R+     +PN  TY  LL  
Sbjct: 95  LVMIER-ED--FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTG 151

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K++ +    ++++ ++ +G  PN   +N L+   C       A +  + +   G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPG 211

Query: 273 VVSYNILL-----------------------------------------RSLCMEGRWEE 291
            V+YNI +                                         R LC  G+++ 
Sbjct: 212 YVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDM 271

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A +++  M G    P   TY+ +I  L    K + A  +  EM      P   +Y  +I 
Sbjct: 272 AFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILID 331

Query: 352 RLCSEGKVDLVVKCLDQM-------------------------------FHRR----CKP 376
             C  G ++      D+M                               F+R     C P
Sbjct: 332 SFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPP 391

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF----------------YKYVI 419
           N  TY+ L   LC  G++Q+A  +   L    ++   +F                Y  +I
Sbjct: 392 NTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALI 451

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC+  K   A +LL  M   G  P+   Y +LI G C  G I+ A E+F+ M +  Y 
Sbjct: 452 DGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYL 511

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P V  + +L+  + K RR DL+++V   M+E    PN  TYT +++G+    E +     
Sbjct: 512 PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQ----- 566

Query: 540 LKELQLRQVVSESAVERLVMQY 561
            K L+L  ++ E      V+ Y
Sbjct: 567 -KALKLLSMMEEKGCSPNVVTY 587



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 176/393 (44%), Gaps = 10/393 (2%)

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           +++D+GY  +  TYN+LV+ L   G ++   +    + + G   + FT     +A  KE 
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
               A+ +++    +  K + V    +++GL +    +EAI F   +      PNVV+Y 
Sbjct: 90  RWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            LL     + +      ++  M     +P    +N L+ S        +A K+L  M   
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 338 RFRPSAASYNPIIARLC------SEGKVDLVVKCLDQMFHRRCKPNE-GTYNGLAMLCGV 390
              P   +YN  I  +C      S   + L  K  ++M    C  N+  T N    LCG+
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           GK   AF II+ +  K        Y  VIT LC   K  +AF L  EM   G  PD YTY
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + LI   C  GLIE+A   F  M       +V  + ALL    K+++   + ++F  MI+
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G  PN  TY+ LV+G+    E++ + EV  +L
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKL 419



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 169/364 (46%), Gaps = 23/364 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + HK+ DA   L+ M+S G +P+ +    L+   CK  K+  A +V   M   G +
Sbjct: 452 DGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYL 511

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +YT L++ + K   +  AM+++ +M +     N VTY +++ GLC +G   ++L+ 
Sbjct: 512 PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKL 571

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + +KG  PN  TY+ L++   K   V  +++L   +  KG  PN V+Y VL+   C 
Sbjct: 572 LSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCA 631

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +EA     ++    +   +  Y  +++      ++  +  LL E++     P    
Sbjct: 632 AGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPV 689

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS---YNPIIARLCSEGKVDLVVKCLD 367
           Y +LI + +  G+ + AL++  EM++     +  S   Y  +I  LC   +++   +   
Sbjct: 690 YGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYS 749

Query: 368 QMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           ++  +   P    +  + ++ G+ KV           NK N + Q  Y     S+C +G 
Sbjct: 750 EITRKGVVPELSVF--VCLIKGLIKV-----------NKWNEALQLCY-----SICDEGV 791

Query: 428 TYQA 431
            +Q+
Sbjct: 792 NWQS 795


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 205/392 (52%), Gaps = 8/392 (2%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+   CK G    A++L+++M+  G   N V + +++RGLC  G ++Q+L    R 
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRR- 90

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +   PN +TYS L++A  K    H A  L+ +++ KG  PN+V+YN L+ G  K  R 
Sbjct: 91  IGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +E +   +++  +G   +V++Y ++L   C     +EA  LL  ++       +VTYN L
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSL 206

Query: 315 IGSL--AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
             +L  A   +T  AL +L++M++   RP+  +Y  ++  LC   ++D   + L  M+ +
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            CK ++ +Y  L +     G+  ++  ++  +         +    VI   C+ G  ++A
Sbjct: 267 GCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            QL   M + G  P + TY++LI   C     + A+++   M + D+KP+V  +N+++  
Sbjct: 327 HQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            C+ +R + +  +FQMM++ G  P+  +YT L
Sbjct: 387 FCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 186/405 (45%), Gaps = 41/405 (10%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M S G +P+VV  T ++  LC A K+ +A+ +    +     P+  +Y+ LV+ LCK
Sbjct: 53  LDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-LHFRRIGEDCAPNVYTYSILVDALCK 111

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A  LV +M   G   N VTYN+L+ G   L  L++ L  L  + Q+G   +  T
Sbjct: 112 SGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVIT 171

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL-CKEG-RTEEAIRFFRD 263
           Y+ +L+   K   +  A +LL+ +     K N+V+YN L T L   EG RT EA+     
Sbjct: 172 YTMILDIFCKNNSIDEAYRLLNAL----EKRNVVTYNSLFTALSTAEGDRTTEALSLLEK 227

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  +G  PN V+Y  +L  LC   R +EA ++L  M         V+Y IL+ + A  G+
Sbjct: 228 MIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGR 287

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
           T  +L++L  M+   +     + N +I + C  G +    +    M  R   P+  TYN 
Sbjct: 288 TYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNT 347

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L                                  I + C+  +   A +LL++M +  F
Sbjct: 348 L----------------------------------IGAFCKAQQPDTAVKLLHQMIQADF 373

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            P+  TY+S+I+  C E   EEA  IF +M +    PD  ++  L
Sbjct: 374 KPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 182/379 (48%), Gaps = 18/379 (4%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           Y  N V+Y  L++G C  G   Q+L+ LD +   G+ PN   ++ ++      RG+  A 
Sbjct: 26  YAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTII------RGLCTAG 79

Query: 224 KLLDDI-----IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           K+   +     I +   PN+ +Y++L+  LCK G+  EA     ++  KG  PNVV+YN 
Sbjct: 80  KVSQALLHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNA 139

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+       R +E   LL EM        ++TY +++     +   D A ++L+ + K  
Sbjct: 140 LIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEK-- 197

Query: 339 FRPSAASYNPIIARLCS-EG-KVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQE 395
              +  +YN +   L + EG +    +  L++M     +PN+  Y   L MLC   ++ E
Sbjct: 198 --RNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDE 255

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A+ ++ S+ ++   +    YK ++ +    G+TY + +LL  M   G+  D+ T + +I 
Sbjct: 256 AYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIH 315

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
             C  G + EA ++F  M +    P    +N L+   CK+++ D ++++   MI+    P
Sbjct: 316 KFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKP 375

Query: 516 NETTYTILVEGIAHQDELE 534
           N  TY  +++    +   E
Sbjct: 376 NVITYNSIIKSFCREQREE 394



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 165/345 (47%), Gaps = 8/345 (2%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  +Y  L++   K      A++LLD++ + G +PN+V +  ++ GLC  G+  +A+  F
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           R +  +   PNV +Y+IL+ +LC  G+  EA  L+ EM     SP +VTYN LI      
Sbjct: 89  RRI-GEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D  L +L EM +   R    +Y  I+   C    +D   + L+ +  R    N  TY
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTY 203

Query: 382 NGL--AMLCGVG-KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           N L  A+    G +  EA ++++ +  +     Q  Y+ V+  LC+  +  +A+Q+L  M
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G   D  +Y  L+      G   ++LE+   M    Y  D    N ++   CK+   
Sbjct: 264 YSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDL 323

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             + ++F+ M ++G +P+  TY  L+       + + + ++L ++
Sbjct: 324 HEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 108/202 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  +A   LE+M+ +G +P+ V    +L  LCK +++ +A +V+  M S G   D  SY 
Sbjct: 217 RTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYK 276

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV      G    +++L+ +M   GY  +T T N ++   C  G+L+++ Q    + Q+
Sbjct: 277 ILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQR 336

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+  TY+ L+ A  K +    A+KLL  +I    KPN+++YN ++   C+E R EEA
Sbjct: 337 GSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEA 396

Query: 258 IRFFRDLPSKGFEPNVVSYNIL 279
              F+ +   G  P+ VSY  L
Sbjct: 397 RGIFQMMVDSGCFPDRVSYTTL 418



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 10/269 (3%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKA--NKMKKAIKVMEMMVSSGIIPDASSYT 137
           N++  +  R+++   K +VV   +L   L  A  ++  +A+ ++E M+  G  P+  +Y 
Sbjct: 182 NNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYR 241

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK   +  A Q++  M   G  T+ V+Y  LV      G    SL+ L R++  
Sbjct: 242 TVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGS 301

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G + +  T + ++    K   +H A +L   +  +G  P+ V+YN L+   CK  + + A
Sbjct: 302 GYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTA 361

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++    +    F+PNV++YN +++S C E R EEA  +   M      P  V+Y  L  S
Sbjct: 362 VKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTLKIS 421

Query: 318 LAYHGKTDHAL---KVLDEMVKGRFRPSA 343
                K D A+   KV D  ++    P  
Sbjct: 422 -----KNDAAIYDQKVHDTCLRKHVDPQG 445



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 141/329 (42%), Gaps = 37/329 (11%)

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD------------ 300
           R      F+R      +  N VSY IL++  C  G +++A ELL EM             
Sbjct: 10  RHRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHT 69

Query: 301 ----------------------GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
                                 G D +P + TY+IL+ +L   G+   A  ++ EMVK  
Sbjct: 70  TIIRGLCTAGKVSQALLHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKG 129

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAF 397
             P+  +YN +I       ++D V+  L +M  R C+ +  TY   L + C    + EA+
Sbjct: 130 CSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAY 189

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            ++ +L  +   +    +  + T+     +T +A  LL +M + G  P+   Y +++  L
Sbjct: 190 RLLNALEKRNVVTYNSLFTALSTA--EGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLML 247

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C    ++EA ++ + M     K D  ++  L++    + RT  SLE+   M+  G + + 
Sbjct: 248 CKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDT 307

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLR 546
            T  +++       +L  + ++ K +  R
Sbjct: 308 KTMNVVIHKFCKAGDLHEAHQLFKSMCQR 336



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 87/170 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L++A+  L  M S+G K D V    L+     A +   +++++  M+ SG I D  
Sbjct: 249 KNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTK 308

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   +++  CK G++  A QL + M   G   + VTYN+L+   C     + +++ L ++
Sbjct: 309 TMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           IQ    PN  TY+ ++++  +E+    A  +   ++  G  P+ VSY  L
Sbjct: 369 IQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 4/176 (2%)

Query: 377 NEGTYNGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           NE +Y G+ M   C  G+ Q+A  ++  + +         +  +I  LC  GK  QA  L
Sbjct: 29  NEVSY-GILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-L 86

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
            +        P+ YTYS L+  LC  G   EA  +   M +    P+V  +NAL+ G  K
Sbjct: 87  HFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRK 146

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
             R D  L + + M ++G   +  TYT++++     + ++ +  +L  L+ R VV+
Sbjct: 147 LERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVT 202


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 212/453 (46%), Gaps = 2/453 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L         M+  G  P+      L+   CK   +  A   +  M  +G+ PD  
Sbjct: 67  RAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTF 126

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +Y  L+  LC+ G +  A  L  +M   +G   +  +Y  L++GLC  G ++ + +   +
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAK 186

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +    P   TY+ LL+   K R V  A  LL +++ KG  PN+V+YN L+ GLC+EGR
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++  +    +  +   P+  +Y  ++  LC  G+     ++L E  G   +  ++TYN 
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G    AL VL  M + R  P   ++N +I   C  GKV   +  L QM    
Sbjct: 307 LINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAG 366

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             PN  T+N L +  C VG+ + A  ++  +        ++ Y   I +LC +G+  +A 
Sbjct: 367 LSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAH 426

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L   +   G    +  Y+SL+ G C  G I+ A  +   M   +  PDV  +N L+ GL
Sbjct: 427 SLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGL 486

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           CK +R D ++++   M ++G  P   T+ IL++
Sbjct: 487 CKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIK 519



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 208/438 (47%), Gaps = 4/438 (0%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +A ++   +     M+ SG  P+  +Y  L+N  CK   +  A   + +M + G   +T 
Sbjct: 67  RAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTF 126

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           TYN L+ GLC  G L  +     ++ ++ G   + ++Y+ L++       +  A ++   
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAK 186

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +     +P + +Y VLL GLCK  R  EA     ++ +KG  PNVV+YN L+  LC EGR
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
           +++  +LL +M+    SP   TY  ++  L  HGK  H  KVL E +         +YN 
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNK 406
           +I   C  G +   +  L  M   R  P   T+N +     CG GKV +A A +  +   
Sbjct: 307 LINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG-GKVHKAMAFLTQMAGA 365

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
             S     +  +I+  C  G+   A +LL  M +YG  PD  TY+  I  LC EG +EEA
Sbjct: 366 GLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEA 425

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             +F  +     K     + +L+ G C+    D +  + + M  +  MP+  TY  L++G
Sbjct: 426 HSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDG 485

Query: 527 IAHQDELELSAEVLKELQ 544
           +     L+ + ++L +++
Sbjct: 486 LCKVKRLDRAIDLLDKMK 503



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 216/462 (46%), Gaps = 7/462 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGIIPDASSYTYLVNCLCKK 146
           RM   G  PD      L+  LC+A  +  A  + ++M    G   D  SYT L+  LC  
Sbjct: 115 RMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAA 174

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A ++  KM          TY  L+ GLC +  + ++   L  ++ KG+VPN  TY
Sbjct: 175 GRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTY 234

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L+    +E       KLL+ +  +   P+  +Y  ++ GLCK G+     +   +   
Sbjct: 235 NALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIG 294

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG    V++YN L+   C  G  + A ++L  M     +P + T+N +I      GK   
Sbjct: 295 KGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHK 354

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLA 385
           A+  L +M      P+  ++N +I+  CS G+  + ++ LD M      P+  TY   + 
Sbjct: 355 AMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFID 414

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G+++EA ++   L  K   +    Y  ++   C+ G    AF L+ +M      P
Sbjct: 415 ALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMP 474

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D +TY++LI GLC    ++ A+++   M++   +P    FN L+  +   ++   + +++
Sbjct: 475 DVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMY 534

Query: 506 QMMIEKGQMPNETTYTILV-----EGIAHQDELELSAEVLKE 542
           + MI  G  P++ TYT+ +     EG   ++ ++++   + E
Sbjct: 535 EQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHE 576



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 220/486 (45%), Gaps = 50/486 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ + +D    LE+M  + H PD    T +++ LCK  K+    KV+   +  G+  +  
Sbjct: 243 QEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVL 302

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N  CK G++  A+ +++ M+         T+N ++ G C  G +++++ FL ++
Sbjct: 303 TYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQM 362

Query: 195 IQKGLVPNAFTYSFLL--EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
              GL PN  T++ L+  + +  ER +  A++LLD +   G  P+  +Y + +  LC EG
Sbjct: 363 AGAGLSPNTVTFNSLISGQCSVGERKI--ALRLLDLMEEYGVLPDRQTYAIFIDALCDEG 420

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + EEA   F  LP KG + + V Y  L+   C  G  + A  L+ +M   +  P + TYN
Sbjct: 421 QLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYN 480

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  L    + D A+ +LD+M K    P+  ++N +I ++  + K     K  +QM   
Sbjct: 481 TLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISS 540

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            CKP++ TY                 +  S    + ++ +E     +             
Sbjct: 541 GCKPDKQTYT----------------LKISTDWFEGATKEENIDMAVV------------ 572

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
               EM + G  PD  TY+++I+     GL E+A    V M      PD   ++ LL  +
Sbjct: 573 ----EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYM 628

Query: 493 CKSRRTDLS--------------LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           C    +D                 E+F+ M E    P  +TY  L+ G+ +Q  LE    
Sbjct: 629 CNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEW 688

Query: 539 VLKELQ 544
           +L ++Q
Sbjct: 689 LLLKMQ 694



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 169/363 (46%), Gaps = 2/363 (0%)

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ G  PN  TY+ L+ A  K   +  A   L  +   G  P+  +YN L+ GLC+ G 
Sbjct: 81  MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140

Query: 254 TEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              A   F  +P + G   +  SY IL++ LC  GR ++A  + A+M  G   P + TY 
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +L+  L    +   A  +L EMV     P+  +YN +I  LC EG+ D V K L++M  +
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQ 260

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           R  P+  TY  +   LC  GKV     ++     K  +     Y  +I   C+ G    A
Sbjct: 261 RHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAA 320

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             +L  M +    P   T++ +I G C  G + +A+     M      P+   FN+L+ G
Sbjct: 321 LDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISG 380

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            C      ++L +  +M E G +P+  TY I ++ +  + +LE +  +   L ++ + + 
Sbjct: 381 QCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAH 440

Query: 552 SAV 554
           + +
Sbjct: 441 NVI 443



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/472 (22%), Positives = 211/472 (44%), Gaps = 17/472 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++ A   L +M   G  P+ V   +L+   C   + K A++++++M   G++PD  +Y 
Sbjct: 351 KVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYA 410

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             ++ LC +G +  A  L   +   G   + V Y SLV G C +G+++ +   ++++  +
Sbjct: 411 IFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASE 470

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +P+  TY+ L++   K + +  A+ LLD +  +G +P   ++N+L+  +  + +  +A
Sbjct: 471 NCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADA 530

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA--EMDGGDRSPTIVTYNILI 315
            + +  + S G +P+  +Y + + +   EG  +E N  +A  EM      P + TYN +I
Sbjct: 531 AKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAII 590

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV----------VKC 365
            +    G  + A     +M+     P   +Y+ ++  +C++   D            V+ 
Sbjct: 591 KAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRN 650

Query: 366 LDQMFHRRCK----PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           L ++F + C+    P   TY  L   LC   +++E   ++  +        ++   Y++ 
Sbjct: 651 LQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLG 710

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
             C      +A +    M    F P   +   L+ GLC  G    A+ IF  M    Y  
Sbjct: 711 CYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNY 770

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           D   +  L+  L +       LE+  +M  K  + +  TY  LV  +A  +E
Sbjct: 771 DEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVRLVAELNE 822



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 133/339 (39%), Gaps = 58/339 (17%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L+ A   L++M  +G +P       L+  +    K   A K+ E M+SSG  PD  +YT
Sbjct: 491 RLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYT 550

Query: 138 YLVNC-----LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             ++        K+ N+  A   V +M + G   +  TYN++++     G   ++     
Sbjct: 551 LKISTDWFEGATKEENIDMA---VVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHV 607

Query: 193 RLIQKGLVPNAFTYSFLL--------------EAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           +++   + P+  TYS LL              E  +K   V    +L + +      P +
Sbjct: 608 KMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGI 667

Query: 239 VSYNVLLTGLCKEGRTEE-----------------------------------AIRFFRD 263
            +Y  LL GLC + R EE                                   A   FR 
Sbjct: 668 STYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRS 727

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  + F+P + S  +LL  LC  G    A  + ++M G   +   V + +LI  L   G 
Sbjct: 728 MAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGH 787

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
               L++L  M   +   S  +Y  ++ RL +E   DLV
Sbjct: 788 AGACLEMLSVMDAKKCVASTRTYASLV-RLVAELNEDLV 825


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 223/459 (48%), Gaps = 3/459 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ DA    + M+ +   P+ +    L+   CK  ++++A  + E M    + P   
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LC+   +  A +++E+ME YG+  +  TY +L  G    GN++ S+   +  
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG+    +T S LL A  KE  +  A ++L   +  G  P  V +N ++ G C+ G  
Sbjct: 349 VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A      + + G  PN V+YN L++  C     EEA + + +M      P + TYN L
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I         D   ++L+EM K   +P+  SY  +I  LC +  +      L  M HR  
Sbjct: 469 IDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGV 528

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN   YN L    C  GK+++AF     +  ++       Y  +I  LC+KGK  +A  
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAEN 588

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  E+T+ G + D  TY+SLI G    G +++ALE++  M++   KP ++ ++ L+ G C
Sbjct: 589 LASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-C 647

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG-IAHQD 531
                 L  +++Q M++   +P+   Y  L+   + H D
Sbjct: 648 GKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGD 686



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 226/471 (47%), Gaps = 9/471 (1%)

Query: 81  DAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           DA + L E  V KG +      + LL  LCK   M+KA +V++  + +G+ P    +  +
Sbjct: 339 DASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTI 398

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           VN  C+ G++  A   +EKME  G   N VTYNSLV+  C + N+ ++ + + ++++KG+
Sbjct: 399 VNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGV 458

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +PN  TY+ L++   +        ++L+++  KG KPN++SY  L+  LCK+    EA  
Sbjct: 459 LPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEV 518

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              D+  +G  PN   YN+L+   C+ G+ ++A     EM   +  PT+VTYNILI  L 
Sbjct: 519 ILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLC 578

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             GK   A  +  E+ +        +YN +I+   S G V   ++  + M     KP   
Sbjct: 579 KKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLN 638

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGN---KQNSSPQE-FYKYVITSLCRKGKTYQAFQLL 435
           TY+ L   CG    +E   +++ +     + N  P    Y  +I      G   +A  L 
Sbjct: 639 TYHRLIAGCG----KEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLH 694

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M   G  PD  TY+ LI G   EG + +   +   M+     P  + ++ L++G CK 
Sbjct: 695 SAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKL 754

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +  D +   ++ M E G  P+ +    L+ G+  +     +  +  E+ ++
Sbjct: 755 KDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMK 805



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 214/467 (45%), Gaps = 2/467 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P V     ++  LCK  +MK A K+ + M+   + P+  +Y  L++  CK G 
Sbjct: 208 MKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQ 267

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A  + E+M+        +T+NSL+ GLC    + ++ + L+ +   G VP+ FTY+ 
Sbjct: 268 LEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTT 327

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L +   K   V A++ L ++ + KG +    + ++LL  LCKEG  E+A    +     G
Sbjct: 328 LFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENG 387

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P  V +N ++   C  G   +A   + +M+     P  VTYN L+         + A 
Sbjct: 388 LAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAE 447

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           K + +MV+    P+  +YN +I         D   + L++M  +  KPN  +Y  L   L
Sbjct: 448 KCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCL 507

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C    + EA  I+  + ++      + Y  +I   C  GK   AF+   EM      P  
Sbjct: 508 CKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTL 567

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ LI GLC +G + EA  +   +       DV  +N+L+ G   +     +LE+++ 
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           M + G  P   TY  L+ G   ++ L L  ++ +E+    +V +  +
Sbjct: 628 MKKSGIKPTLNTYHRLIAGCG-KEGLVLVEKIYQEMLQMNLVPDRVI 673



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/511 (23%), Positives = 219/511 (42%), Gaps = 46/511 (9%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P V      L  L    + +  +++   +V SG+ PD   Y   +    K G+
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGD 197

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A++L+  M+  G       YN ++ GLC    +  + +  D ++ + + PN  TY+ 
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   K   +  A  + + +  +  +P ++++N LL GLC+    EEA R   ++   G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317

Query: 269 FEPNVVSY-----------------------------------NILLRSLCMEGRWEEAN 293
           F P+  +Y                                   +ILL +LC EG  E+A 
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAE 377

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           E+L +      +P  V +N ++      G  + A   +++M     RP+  +YN ++ + 
Sbjct: 378 EVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKF 437

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSS 410
           C    ++   KC+ +M  +   PN  TYN L  + G G+       F I++ +  K    
Sbjct: 438 CEMKNMEEAEKCIKKMVEKGVLPNVETYNTL--IDGYGRSCLFDRCFQILEEMEKKGLKP 495

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I  LC+     +A  +L +M   G  P++  Y+ LI G C+ G +++A   F
Sbjct: 496 NVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFF 555

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M   +  P +  +N L+ GLCK  +   +  +   +  KG   +  TY  L+ G +  
Sbjct: 556 DEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSS- 614

Query: 531 DELELSAEVLKELQLRQVVSESAVERLVMQY 561
                +  V K L+L + + +S ++  +  Y
Sbjct: 615 -----AGNVQKALELYETMKKSGIKPTLNTY 640



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 205/469 (43%), Gaps = 37/469 (7%)

Query: 102 TNLLYDLCKANKM-KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
           +++L  +C  +KM  ++ ++  +M   G++P  +S    +  L         +QL  ++ 
Sbjct: 115 SDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIV 174

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
           + G   +   Y   ++    LG+L ++++ +  + + G+ P  F Y+ ++    KE+ + 
Sbjct: 175 ESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMK 234

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A KL D+++ +   PN ++YN L+ G CK G+ EEA      +  +  EP ++++N LL
Sbjct: 235 DAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLL 294

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTY----------------------------- 311
             LC     EEA  +L EM+     P   TY                             
Sbjct: 295 NGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQ 354

Query: 312 ------NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
                 +IL+ +L   G  + A +VL + ++    P    +N I+   C  G ++     
Sbjct: 355 ILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTT 414

Query: 366 LDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           +++M     +PN  TYN L    C +  ++EA   I+ +  K      E Y  +I    R
Sbjct: 415 IEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGR 474

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
                + FQ+L EM K G  P+  +Y  LI  LC +  I EA  I   M      P+   
Sbjct: 475 SCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQI 534

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           +N L+ G C + +   +   F  M+ +  +P   TY IL+ G+  + ++
Sbjct: 535 YNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKV 583



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 1/182 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M   G KP +     L+   C    +    K+ + M+   ++PD   Y  L++C  + 
Sbjct: 626 ETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEH 684

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G+V  A  L   ME  G   + +TYN L+ G    G +++    ++ +  +GL+P   TY
Sbjct: 685 GDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETY 744

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L+    K +    A     ++   G  P++   + L+TGL +EGR+ +A     ++  
Sbjct: 745 DILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNM 804

Query: 267 KG 268
           KG
Sbjct: 805 KG 806


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 208/423 (49%), Gaps = 2/423 (0%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M + G+ P+  SY  +V   CK GNV  + + +  M + G+  +  T + +VR  C  G 
Sbjct: 193 MCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGF 252

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           + ++L +  R  + GL PN   ++ ++E   K   V  A ++L++++ +G KPN+ ++  
Sbjct: 253 VTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTA 312

Query: 244 LLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           L+ GLCK+G TE+A R F  L  S+  +PNV++Y  ++   C + +   A  LL+ M   
Sbjct: 313 LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
             +P   TY  LI      G  + A ++++ M +  F P+  +YN I+  LC +G+V   
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEA 432

Query: 363 VKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            K L   F      ++ TY  L +  C   ++++A  +   +           Y  +I  
Sbjct: 433 YKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAV 492

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            CR+ +  ++     E  ++G  P + TY+S+I G C EG +  AL+ F  M ++    D
Sbjct: 493 FCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASD 552

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              + AL+ GLCK  + D +  ++  MIEKG  P E T   L       D+   +  VL+
Sbjct: 553 SITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLE 612

Query: 542 ELQ 544
            L+
Sbjct: 613 RLE 615



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 227/457 (49%), Gaps = 3/457 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           ++K+AI+++  M + G+ P   +  ++V  + + G V YA  L ++M   G   N V+Y 
Sbjct: 147 RVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYR 206

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            +V G C LGN+ +S ++L  +I++G V +  T S ++    ++  V  A+         
Sbjct: 207 VMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEM 266

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G +PNL+++  ++ GLCK G  ++A     ++  +G++PNV ++  L+  LC +G  E+A
Sbjct: 267 GLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKA 326

Query: 293 NELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
             L  ++    +  P ++TY  +I       K + A  +L  M +    P+  +Y  +I 
Sbjct: 327 FRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLID 386

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
             C  G  +   + ++ M      PN  TYN +   LC  G+VQEA+ +++S       +
Sbjct: 387 GHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDA 446

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
            +  Y  +I+  C++ +  QA  L  +M K G  PD ++Y++LI   C E  ++E+   F
Sbjct: 447 DKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFF 506

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
                +   P    + +++ G C+     L+L+ F  M + G   +  TY  L+ G+  Q
Sbjct: 507 EEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQ 566

Query: 531 DELELSAEVLKELQLRQVVSESAVERLVMQYDFEGIE 567
            +L+  A  L +  + + ++   V R+ + Y++  I+
Sbjct: 567 SKLD-EARCLYDAMIEKGLTPCEVTRVTLAYEYCKID 602



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/504 (22%), Positives = 224/504 (44%), Gaps = 38/504 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M ++G +P+ V    ++   CK   + ++ + +  M+  G + D ++ + +V   C+
Sbjct: 190 FDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCE 249

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG V  A+    +  + G   N + +  ++ GLC  G++ Q+ + L+ ++ +G  PN +T
Sbjct: 250 KGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYT 309

Query: 206 YSFLLEAAYKERGVHAAMKLLDDII-AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           ++ L++   K+     A +L   ++ ++  KPN+++Y  +++G C++ +   A      +
Sbjct: 310 HTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRM 369

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +G  PN  +Y  L+   C  G +E A EL+  M+    SP + TYN ++  L   G+ 
Sbjct: 370 KEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRV 429

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A KVL    +        +Y  +I+  C + ++   +   ++M     +P+  +Y  L
Sbjct: 430 QEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTL 489

Query: 385 -AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
            A+ C   +++E+    +           + Y  +I   CR+G    A +  + M+ +G 
Sbjct: 490 IAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGC 549

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIF--------------------------------V 471
             DS TY +LI GLC +  ++EA  ++                                V
Sbjct: 550 ASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMV 609

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           V+E  + K  V   N L+  LC  R+  ++   F  +++K    N  T    +      +
Sbjct: 610 VLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYESN 669

Query: 532 EL----ELSAEVLKELQLRQVVSE 551
           +     +LSA + KE  L   VS+
Sbjct: 670 KYDLVSDLSARIYKENHLAIKVSK 693



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 159/331 (48%), Gaps = 4/331 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGIIPDASSYT 137
           +  AF  LE MV +G KP+V   T L+  LCK    +KA ++ ++++ S    P+  +YT
Sbjct: 288 VKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYT 347

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  C+   +  A  L+ +M++ G   NT TY +L+ G C  GN  ++ + ++ + ++
Sbjct: 348 AMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEE 407

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  TY+ +++   K+  V  A K+L      G   + V+Y +L++  CK+   ++A
Sbjct: 408 GFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQA 467

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +   G +P++ SY  L+   C E R +E+     E       PT  TY  +I  
Sbjct: 468 LVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICG 527

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL-DQMFHRRCKP 376
               G    ALK    M        + +Y  +I+ LC + K+D   +CL D M  +   P
Sbjct: 528 YCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLD-EARCLYDAMIEKGLTP 586

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            E T   LA   C +     A  +++ L  K
Sbjct: 587 CEVTRVTLAYEYCKIDDGCSAMVVLERLEKK 617



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 151/318 (47%), Gaps = 11/318 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD K+N A + L RM  +G  P+    T L+   CKA   ++A ++M +M   G  P+  
Sbjct: 355 RDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVC 414

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +V+ LCKKG V  A ++++     G   + VTY  L+   C    + Q+L   +++
Sbjct: 415 TYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKM 474

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G+ P+  +Y+ L+    +E+ +  +    ++ +  G  P   +Y  ++ G C+EG  
Sbjct: 475 VKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNL 534

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A++FF  +   G   + ++Y  L+  LC + + +EA  L   M     +P  VT    
Sbjct: 535 RLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTR--- 591

Query: 315 IGSLAY-HGKTD---HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
             +LAY + K D    A+ VL+ + K  +     + N ++ +LCSE KV +      ++ 
Sbjct: 592 -VTLAYEYCKIDDGCSAMVVLERLEKKLW---VRTVNTLVRKLCSERKVGMAALFFHKLL 647

Query: 371 HRRCKPNEGTYNGLAMLC 388
            +    N  T       C
Sbjct: 648 DKDPNVNRVTIAAFMTAC 665



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 2/279 (0%)

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + +K FE        +++S    GR +EA E++ EM     +P+  T N ++  +   G 
Sbjct: 123 ISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGL 182

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            ++A  + DEM     +P+  SY  ++   C  G V    + L  M  R    +  T + 
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSL 242

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           +    C  G V  A    +             +  +I  LC++G   QAF++L EM   G
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFV-VMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           + P+ YT+++LI GLC +G  E+A  +F+ ++   ++KP+V  + A++ G C+  + + +
Sbjct: 303 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRA 362

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             +   M E+G  PN  TYT L++G       E + E++
Sbjct: 363 EMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELM 401


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 225/477 (47%), Gaps = 4/477 (0%)

Query: 75  RDHKLNDAFLQLERMVSK-GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           R  ++ D  L  + M++K    P+V   + LL+ L K      A+++   MVS GI PD 
Sbjct: 168 RSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV 227

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             YT ++  LC+  ++  A +++  ME  G   N V YN L+ GLC    + +++     
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L  K L P+  TY  L+    K +     ++++D+++     P+  + + L+ GL K G+
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA+   + +   G  PN+  YN L+ SLC   ++ EA  L   M      P  VTY+I
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      GK D AL  L EMV    + S   YN +I   C  G +      + +M +++
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            +P   TY  L    C  GK+ +A  +   +  K  +     +  +++ L R G    A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L  EM ++   P+  TY+ +I G C EG + +A E    M E    PD  ++  L+ GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 493 CKSRRTDLSLEVFQMMIEKGQMP-NETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           C + +     +VF   + KG    NE  YT L+ G   + +LE +  V +E+  R V
Sbjct: 588 CLTGQAS-EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 219/449 (48%), Gaps = 17/449 (3%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +  K  KPDVV    L+Y LCK  + +  +++M+ M+     P  ++ + LV  L K+G 
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A+ LV+++ D+G   N   YN+L+  LC     +++    DR+ + GL PN  TYS 
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   +   +  A+  L +++  G K ++  YN L+ G CK G    A  F  ++ +K 
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            EP VV+Y  L+   C +G+  +A  L  EM G   +P+I T+  L+  L   G    A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           K+ +EM +   +P+  +YN +I   C EG +    + L +M  +   P+  +Y  L   L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           C  G+  EA   +  L +K N    E  Y  ++   CR+GK  +A  +  EM + G   D
Sbjct: 588 CLTGQASEAKVFVDGL-HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646

Query: 447 SYTYSSLIRGLCME-------GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
              Y  LI G           GL++E       M +   KPD   + +++    K+    
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKE-------MHDRGLKPDDVIYTSMIDAKSKTGDFK 699

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIA 528
            +  ++ +MI +G +PNE TYT ++ G+ 
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLC 728



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/528 (25%), Positives = 228/528 (43%), Gaps = 36/528 (6%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  K ++A L  +RM   G +P+ V  + L+   C+  K+  A+  +  MV +G+ 
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
                Y  L+N  CK G++  A   + +M +       VTY SL+ G C  G +N++L+ 
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +  KG+ P+ +T++ LL   ++   +  A+KL +++     KPN V+YNV++ G C+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG   +A  F +++  KG  P+  SY  L+  LC+ G+  EA   +  +  G+     + 
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+      GK + AL V  EMV+         Y  +I          L    L +M 
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            R  KP++  Y  +       G  +EAF I   + N+     +  Y  VI  LC+ G   
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734

Query: 430 QAFQLLYEMTKYGFTPD-----------------------------------SYTYSSLI 454
           +A  L  +M      P+                                   + TY+ LI
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           RG C +G IEEA E+   M      PD   +  ++  LC+      ++E++  M EKG  
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           P+   Y  L+ G     E+  + E+  E+  + ++  +   R     D
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSND 902



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 226/499 (45%), Gaps = 41/499 (8%)

Query: 48  TQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYD 107
             V I P   +YT   R      D       L+ A   +  M + G   ++V    L+  
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKD-------LSRAKEMIAHMEATGCDVNIVPYNVLIDG 271

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LCK  K+ +A+ + + +    + PD  +Y  LV  LCK       ++++++M    +  +
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
               +SLV GL   G + ++L  + R++  G+ PN F Y+ L+++  K R  H A  L D
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            +   G +PN V+Y++L+   C+ G+ + A+ F  ++   G + +V  YN L+   C  G
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
               A   +AEM      PT+VTY  L+G     GK + AL++  EM      PS  ++ 
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQ 407
            +++ L   G +   VK  ++M     KPN  TYN                         
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN------------------------- 546

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                     +I   C +G   +AF+ L EMT+ G  PD+Y+Y  LI GLC+ G   EA 
Sbjct: 547 ---------VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
                + + + + +   +  LL G C+  + + +L V Q M+++G   +   Y +L++G 
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657

Query: 528 AHQDELELSAEVLKELQLR 546
               + +L   +LKE+  R
Sbjct: 658 LKHKDRKLFFGLLKEMHDR 676



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 189/387 (48%), Gaps = 7/387 (1%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T ++L+ GL    +   +++  + ++  G+ P+ + Y+ ++ +  + + +  A +++  +
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
            A G   N+V YNVL+ GLCK+ +  EA+   +DL  K  +P+VV+Y  L+  LC    +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           E   E++ EM     SP+    + L+  L   GK + AL ++  +V     P+   YN +
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL---GN 405
           I  LC   K        D+M     +PN+ TY+ L  M C  GK+  A + +  +   G 
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K +  P   Y  +I   C+ G    A   + EM      P   TY+SL+ G C +G I +
Sbjct: 434 KLSVYP---YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           AL ++  M      P +  F  LL GL ++     ++++F  M E    PN  TY +++E
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550

Query: 526 GIAHQDELELSAEVLKELQLRQVVSES 552
           G   + ++  + E LKE+  + +V ++
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDT 577


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 237/499 (47%), Gaps = 4/499 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GI 129
           D   R H+   A     +++  G + +++ A +LL   C+A +  +A+ ++       G 
Sbjct: 122 DCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGC 181

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--PTNTVTYNSLVRGLCMLGNLNQS 187
           +PD  SY+ L+  LC +G  G A  L+  M + G     N V YN+++ G    G++N++
Sbjct: 182 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKA 241

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                 ++Q+G+ P+  TY+ ++ A  K R +  A   L  ++ K   PN  +YN L+ G
Sbjct: 242 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 301

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               G+ +EA+R F+++      P+VV+ ++L+ SLC  G+ +EA ++   M    ++P 
Sbjct: 302 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 361

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +YNI++   A  G       + D M+     P   ++N +I    + G +D  +   +
Sbjct: 362 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 421

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M     KP+  TY   +A LC +GK+ +A      + ++  +  +  Y  +I   C  G
Sbjct: 422 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 481

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              +A +L+ E+   G   D   +SS+I  LC  G + +A  IF +       PD   +N
Sbjct: 482 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 541

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            L+ G C   + + +L VF  M+  G  PN   Y  LV G      ++    + +E+  R
Sbjct: 542 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQR 601

Query: 547 QVVSESAVERLVMQYDFEG 565
            +   + +  +++   FE 
Sbjct: 602 GIKPSTILYSIIIDGLFEA 620



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 227/465 (48%), Gaps = 3/465 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AFL+  +MV+K   P+     NL+Y      + K+A++V + M    I+PD  + + L+
Sbjct: 277 EAFLR--QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 334

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCK G +  A  + + M   G   +  +YN ++ G    G L       D ++  G+ 
Sbjct: 335 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 394

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ +T++ L++A      +  AM + +++   G KP++V+Y  ++  LC+ G+ ++A+  
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +  +G  P+  +YN L++  C  G   +A EL++E+        IV ++ +I +L  
Sbjct: 455 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 514

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+   A  + D  V     P A  YN ++   C  GK++  ++  D M     +PN   
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  L    C +G++ E  ++ + +  +        Y  +I  L   G+T  A    +EMT
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT 634

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G   D  TY+ ++RGL      +EA+ +F  +   + K ++   N ++ G+ ++RR +
Sbjct: 635 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 694

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + ++F  +     +P+  TY+I++  +  +  +E + ++   +Q
Sbjct: 695 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 739



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 233/537 (43%), Gaps = 73/537 (13%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII--PDASSYTYLVNCL 143
           L R    G  PDV   + LL  LC   K  +A  ++ MM   G +  P+  +Y  +++  
Sbjct: 173 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 232

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
            K+G+V  A  L ++M   G P + VTYNS+V  LC    ++++  FL +++ K ++PN 
Sbjct: 233 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 292

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           +TY+ L+           A+++  ++      P++V+ ++L+  LCK G+ +EA   F  
Sbjct: 293 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 352

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  KG  P+V SYNI+L     +G   +  +L   M G   +P   T+N+LI + A  G 
Sbjct: 353 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 412

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+ + +EM     +P   +Y  +IA LC  GK+D  ++  +QM  +   P++  YN 
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR------------------ 424
           L    C  G + +A  +I  + N        F+  +I +LC+                  
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532

Query: 425 -----------------KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                             GK  +A ++   M   G  P+   Y +L+ G C  G I+E L
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 592

Query: 468 EIFVVMEEYDYKP-----------------------------------DVDNFNALLLGL 492
            +F  M +   KP                                   D+  +N +L GL
Sbjct: 593 SLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 652

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            K+R  D ++ +F+ +       N  T   +++G+     +E + ++   +   ++V
Sbjct: 653 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 709



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 173/384 (45%), Gaps = 39/384 (10%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P + TY+ L++   +      A+     ++  G + N++  N LL G C+  RT+EA+
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 259 R-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILI 315
                  P  G  P+V SY+ILL+SLC +G+  +A++LL  M  G    SP +V YN +I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  + A  +  EMV+    P   +YN ++  LC    +D     L QM ++R  
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 376 PNEGTYNGL------------------------------------AMLCGVGKVQEAFAI 399
           PN  TYN L                                      LC  GK++EA  +
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
             ++  K  +     Y  ++     KG       L   M   G  PD YT++ LI+    
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G++++A+ IF  M ++  KPDV  +  ++  LC+  + D ++E F  MI++G  P++  
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 469

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
           Y  L++G      L  + E++ E+
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEI 493



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 207/471 (43%), Gaps = 47/471 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
           P + +Y  L++C  +      A+    ++   G   N +  N L+ G C     +++L  
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG---KPNLVSYNVLLT 246
            L R  + G VP+ F+YS LL++   +     A  LL  ++A+GG    PN+V+YN ++ 
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVCSPNVVAYNTVID 230

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME-------------------- 286
           G  KEG   +A   F+++  +G  P++V+YN ++ +LC                      
Sbjct: 231 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 290

Query: 287 ---------------GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
                          G+W+EA  +  EM      P +VT ++L+GSL  +GK   A  V 
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 350

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGV 390
           D M      P   SYN ++    ++G +  +    D M      P+  T+N L       
Sbjct: 351 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 410

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G + +A  I   + +         Y+ VI +LCR GK   A +   +M   G  PD Y Y
Sbjct: 411 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 470

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + LI+G C  G + +A E+   +       D+  F++++  LCK  R   +  +F + + 
Sbjct: 471 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 530

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            G  P+   Y +L++G     ++E      K L++   +  + +E  V+ Y
Sbjct: 531 VGLHPDAVVYNMLMDGYCLVGKME------KALRVFDAMVSAGIEPNVVGY 575



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 182/388 (46%), Gaps = 6/388 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A +    M   G KPDVV    ++  LC+  KM  A++    M+  G+ PD  +Y  
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C  G++  A +L+ ++ + G   + V ++S++  LC LG +  +    D  +  G
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+A  Y+ L++       +  A+++ D +++ G +PN+V Y  L+ G CK GR +E +
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 592

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  +G +P+ + Y+I++  L   GR   A     EM     +  I TYNI++  L
Sbjct: 593 SLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 652

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +   D A+ +  E+     + +  + N +I  +    +V+        +   R  P+ 
Sbjct: 653 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSV 712

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ +   L   G V+EA  +  S+ N           +V+  L +K +  +A   L +
Sbjct: 713 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSK 772

Query: 438 MTKYGFTPDSYTYSSLI-----RGLCME 460
           + +  F+ +  T   L+     +G C E
Sbjct: 773 IDERNFSLEHLTAMLLVDLFSSKGTCRE 800



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 192/428 (44%), Gaps = 21/428 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    + M  KG  PDV     +L        +     + ++M+  GI PD  ++ 
Sbjct: 342 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 401

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+      G +  AM +  +M D+G   + VTY +++  LC +G ++ +++  +++I +
Sbjct: 402 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 461

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ + Y+ L++       +  A +L+ +I+  G   ++V ++ ++  LCK GR  +A
Sbjct: 462 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 521

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F    + G  P+ V YN+L+   C+ G+ E+A  +   M      P +V Y  L+  
Sbjct: 522 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 581

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D  L +  EM++   +PS   Y+ II  L   G+              + K +
Sbjct: 582 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRT----------VPAKMKFH 631

Query: 378 EGTYNGLAM-LCGVGKV----------QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           E T +G+AM +C    V           EA  + + L              +I  + +  
Sbjct: 632 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 691

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  L   +++    P   TYS +I  L  EGL+EEA ++F  M+    +P+    N
Sbjct: 692 RVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLN 751

Query: 487 ALLLGLCK 494
            ++  L K
Sbjct: 752 HVVRELLK 759


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 215/457 (47%), Gaps = 36/457 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + +AF  +  M SKG  P V     ++  LCK  K ++A +V   M+ SG+ PD+++Y  
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   CKKG+      +   M       + V ++S++      GNL+++L + + + + G
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L+P+   Y+ L++   ++  +  AM L ++++ +G   ++V+YN +L GLCK     EA 
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           + F ++  +G  P+  +  IL+   C  G  + A EL  +M        +VTYN L+   
Sbjct: 456 KLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF 515

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  D A ++  +MV     P+  S++ ++  LCS+G +    +  D+M  +  KP  
Sbjct: 516 GKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPT- 574

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
                  M+C                   NS        +I   CR G        L +M
Sbjct: 575 ------VMIC-------------------NS--------MIKGYCRSGNASDGEIFLEKM 601

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD--YKPDVDNFNALLLGLCKSR 496
              GF PD  +Y++LI G   E  + +A  +   MEE      PDV  +N++L G C+  
Sbjct: 602 ISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           +   +  V + MIE+G  P+ +TYT L+ G   QD L
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNL 698



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 197/440 (44%), Gaps = 34/440 (7%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+    +A K+++A +   ++ S G      +   L+  L + G V  A ++ +++   G
Sbjct: 161 LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSG 220

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  T N +V  LC  G + +   FL  + +KG+ P+  TY+ L+ A   +  +  A 
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L+  + +KG  P + +YN ++ GLCK G+ E A   F ++   G  P+  +Y  LL   
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C +G   E   + ++M   D  P +V ++ ++      G  D AL   + + +    P  
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
             Y  +I   C +G +   +   ++M  + C  +  TYN                     
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNT-------------------- 440

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                         ++  LC++    +A +L  EMT+ G  PDSYT + LI G C  G +
Sbjct: 441 --------------ILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNL 486

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           + A+E+F  M+E   K DV  +N LL G  K    D + E++  M+ K  +P   +++IL
Sbjct: 487 QNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSIL 546

Query: 524 VEGIAHQDELELSAEVLKEL 543
           V  +  +  L  +  V  E+
Sbjct: 547 VNALCSKGHLSEAFRVWDEM 566



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 154/306 (50%), Gaps = 2/306 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +++A      M+ +G   DVV    +L+ LCK   + +A K+   M   G+ PD+ 
Sbjct: 412 RKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSY 471

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + T L++  CK GN+  AM+L +KM++     + VTYN+L+ G   +G+++ + +    +
Sbjct: 472 TLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADM 531

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + K ++P   ++S L+ A   +  +  A ++ D++I+K  KP ++  N ++ G C+ G  
Sbjct: 532 VSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNA 591

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD--GGDRSPTIVTYN 312
            +   F   + S+GF P+ +SYN L+     E    +A  L+ +M+   G   P + TYN
Sbjct: 592 SDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYN 651

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            ++       +   A  VL +M++    P  ++Y  +I    S+  +    +  D+M  R
Sbjct: 652 SILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQR 711

Query: 373 RCKPNE 378
              P++
Sbjct: 712 GFSPDD 717



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 127/318 (39%), Gaps = 73/318 (22%)

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +++L+R+     +  EA E    +     + +I   N LIGSL   G  + A ++  E+ 
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +     +  + N ++  LC +GK++ V   L ++  +   P+  TYN L           
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTL----------- 266

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
                                  I++   +G   +AF+L++ M   GF+P  YTY+++I 
Sbjct: 267 -----------------------ISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVIN 303

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK--------------------- 494
           GLC  G  E A E+F  M      PD   + +LL+  CK                     
Sbjct: 304 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP 363

Query: 495 --------------SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ----DELELS 536
                         S   D +L  F  + E G +P+   YTIL++G   +    + + L 
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423

Query: 537 AEVLKELQLRQVVSESAV 554
            E+L++     VV+ + +
Sbjct: 424 NEMLQQGCAMDVVTYNTI 441


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 222/461 (48%), Gaps = 3/461 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MVS+G   D+V  T L+  L K  K  +    +   +S  + P+  +YT L++ LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             NV  A Q++ +ME+     N VT++S++ G    G L+++ ++   + ++G+ PN  T
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L++  +K +G  AA+++  D++ +G K N    + L+ GL + G+ EEA+  F+D  
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G   + V+Y  L+  L   G    A +   E+   +  P  V YN+ I  L   GK  
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A   L EM     +P  ++YN +I   C +G+    +K L +M     KPN  TYN L 
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE-MTKYGF 443
           A L G G V++A  ++  + +    SP       +   C + +       ++E M   G 
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVS-AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGL 690

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D   Y++L++ LC  G+  +A  +   M      PD   FNAL+LG CKS   D +  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +  M+ +   PN  T+  L+ G+     +  +  VL E++
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 214/478 (44%), Gaps = 7/478 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +RM ++G   DVV    L+   C+A ++  A  V++MM  +G+ P+ ++YT  +   C+ 
Sbjct: 193 DRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A  L E M   G   + VT ++LV GLC  G  +++      + + G  PN  TY
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY 312

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L+++  K       + LL +++++G   +LV+Y  L+  L K+G+T+E     R   S
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               PN V+Y +L+ +LC     +EA ++L EM+    SP +VT++ +I      G  D 
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN----EGTYN 382
           A +    M +    P+  +Y  +I         D  ++    M     K N    +   N
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVN 492

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           GL      GK++EA A+ +       S     Y  +I  L + G    AF+   E+    
Sbjct: 493 GLRQ---NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD+  Y+  I  LCM G  +EA      M     KPD   +N +++  C+   T  +L
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           ++   M      PN  TY  LV G+     +E +  +L E+        S   R V+Q
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 219/466 (46%), Gaps = 4/466 (0%)

Query: 81  DAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           DA L++   M+ +G K +     +L+  L +  K+++A+ + +    SG+  D  +YT L
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++ L K G++  A +  +++ D     + V YN  +  LCMLG   ++  FL  +   GL
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ ++ +  ++     A+KLL ++     KPNL++YN L+ GL   G  E+A  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              ++ S GF P+ +++  +L++     R +   ++   M        I  YN L+  L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
           YHG T  A  VL+EM+     P   ++N +I   C    +D       QM H+   PN  
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 380 TYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           T+N L   L  VG++ EA  ++  +  K    P    Y  + T   ++    +A +L  E
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEM-EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCE 824

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   GF P   TY++LI      G++ +A E+F  M++    P    ++ L+ G  + R 
Sbjct: 825 MVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRN 884

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                +  + M EKG  P++ T + +    +       +  +LK L
Sbjct: 885 GTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 218/472 (46%), Gaps = 5/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   + +AF   E MV  G   DVV  + L+  LC+  +  +A  +   M   G  P+  
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L K G     + L+ +M   G   + VTY +L+  L   G  ++    L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   L PN  TY+ L++A  K   V  A ++L ++  K   PN+V+++ ++ G  K G  
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYN 312
           ++A  + R +  +G  PNVV+Y  L+         + A E+  +M  +G   +  IV  +
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV--D 488

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+  L  +GK + A+ +  +           +Y  +I  L   G +    K   ++  R
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+   YN  +  LC +GK +EA + +  + N      Q  Y  +I S CRKG+T +A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL+EM      P+  TY++L+ GL   G +E+A  +   M    + P       +L  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +SRR D+ L++ + M+  G   + T Y  L++ + +      +  VL+E+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 221/479 (46%), Gaps = 1/479 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + H +++A   L  M  K   P+VV  ++++    K   + KA +   MM   GI 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++   K      A+++   M   G   N    +SLV GL   G + +++  
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
                  GL  +   Y+ L++  +K   +  A K   +++ +   P+ V YNV +  LC 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EA  F  ++ + G +P+  +YN ++ S C +G   +A +LL EM      P ++T
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN L+  L   G  + A  +L+EMV   F PS+ ++  ++       ++D+++   + M 
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +     +   YN  L +LC  G  ++A  +++ +     +     +  +I   C+     
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF    +M     +P+  T+++L+ GL   G I EA  + + ME+   +P+   ++ L 
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            G  K      ++ ++  M+ KG +P  +TY  L+        +  + E+ K++Q R V
Sbjct: 807 TGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 195/480 (40%), Gaps = 76/480 (15%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           D      LLY  C+   ++ AI ++    SS   P   +Y  L+  L       +A  ++
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLR---SSR--PTTVAYNILLAALSDHA---HAPAVL 123

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCM----------------------------------LG 182
            +M   G P + VT N+L+ GLC                                    G
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFG 183

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           +   +L   DR+  +GL  +   Y+ L+    +   V AA  +LD +   G  PN+ +Y 
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYT 243

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
             +   C+    EEA   +  +   G   +VV+ + L+  LC +GR+ EA  L  EMD  
Sbjct: 244 PFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKV 303

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
             +P  VTY  LI SLA  G+    L +L EMV         +Y  ++  L  +GK D V
Sbjct: 304 GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEV 363

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
              L         PN  TY  L                                  I +L
Sbjct: 364 KDTLRFALSDNLSPNGVTYTVL----------------------------------IDAL 389

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+     +A Q+L EM +   +P+  T+SS+I G    GL+++A E   +M+E    P+V
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNV 449

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +  L+ G  K +  D +LEV+  M+ +G   N+     LV G+    ++E +  + K+
Sbjct: 450 VTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKD 509



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M++ G   D+     LL  LC     +KA  V+E M+ SGI PD  ++  L+   CK 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            ++  A     +M       N  T+N+L+ GL  +G + ++   L  + + GL PN  TY
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L     K+     AM+L  +++ KG  P + +YN L++   K G   +A   F+D+  
Sbjct: 803 DILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  P   +Y+IL+          E  + L +M     SP+  T + +  + +  G T  
Sbjct: 863 RGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQ 922

Query: 327 ALKVLDEMVK 336
           A ++L  + +
Sbjct: 923 AQRLLKNLYR 932



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 129/320 (40%), Gaps = 20/320 (6%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+  L   G    AIRF    P+        S N LL S C       A  LL       
Sbjct: 52  LIPALATSGLAAAAIRFRPADPA--------SLNALLYSHCRLRLLRPAIALLRS----- 98

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             PT V YNIL+ +L+ H    HA  VL EM K        + N ++A LC  G+VD   
Sbjct: 99  SRPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 364 KCLDQMFHRRCKPNEGTYNGLAML--CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
                       P   +   L++L   G G    A ++   +  +        Y  ++  
Sbjct: 156 A--LADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            CR G+   A  +L  M + G  P+  TY+  I   C    +EEA +++  M       D
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           V   +AL+ GLC+  R   +  +F+ M + G  PN  TY  L++ +A     +    +L 
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 542 ELQLRQVVSESAVERLVMQY 561
           E+  R VV +      +M +
Sbjct: 334 EMVSRGVVMDLVTYTALMDW 353



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 86/190 (45%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   L++AF    +M+ +   P++     LL  L    ++ +A  V+  M  SG+ P+  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L     K+ N   AM+L  +M   G+     TYN+L+      G + Q+ +    +
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P + TY  L+    + R      K L D+  KG  P+  + + +     K G T
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 255 EEAIRFFRDL 264
            +A R  ++L
Sbjct: 921 WQAQRLLKNL 930


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 222/461 (48%), Gaps = 3/461 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MVS+G   D+V  T L+  L K  K  +    +   +S  + P+  +YT L++ LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             NV  A Q++ +ME+     N VT++S++ G    G L+++ ++   + ++G+ PN  T
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L++  +K +G  AA+++  D++ +G K N    + L+ GL + G+ EEA+  F+D  
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G   + V+Y  L+  L   G    A +   E+   +  P  V YN+ I  L   GK  
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A   L EM     +P  ++YN +I   C +G+    +K L +M     KPN  TYN L 
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE-MTKYGF 443
           A L G G V++A  ++  + +    SP       +   C + +       ++E M   G 
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVS-AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGL 690

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D   Y++L++ LC  G+  +A  +   M      PD   FNAL+LG CKS   D +  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +  M+ +   PN  T+  L+ G+     +  +  VL E++
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 214/478 (44%), Gaps = 7/478 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +RM ++G   DVV    L+   C+A ++  A  V++MM  +G+ P+ ++YT  +   C+ 
Sbjct: 193 DRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A  L E M   G   + VT ++LV GLC  G  +++      + + G  PN  TY
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY 312

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L+++  K       + LL +++++G   +LV+Y  L+  L K+G+T+E     R   S
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
               PN V+Y +L+ +LC     +EA ++L EM+    SP +VT++ +I      G  D 
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN----EGTYN 382
           A +    M +    P+  +Y  +I         D  ++    M     K N    +   N
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVN 492

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           GL      GK++EA A+ +       S     Y  +I  L + G    AF+   E+    
Sbjct: 493 GLRQ---NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD+  Y+  I  LCM G  +EA      M     KPD   +N +++  C+   T  +L
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           ++   M      PN  TY  LV G+     +E +  +L E+        S   R V+Q
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 219/466 (46%), Gaps = 4/466 (0%)

Query: 81  DAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           DA L++   M+ +G K +     +L+  L +  K+++A+ + +    SG+  D  +YT L
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++ L K G++  A +  +++ D     + V YN  +  LCMLG   ++  FL  +   GL
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ ++ +  ++     A+KLL ++     KPNL++YN L+ GL   G  E+A  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              ++ S GF P+ +++  +L++     R +   ++   M        I  YN L+  L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
           YHG T  A  VL+EM+     P   ++N +I   C    +D       QM H+   PN  
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 380 TYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           T+N L   L  VG++ EA  ++  +  K    P    Y  + T   ++    +A +L  E
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEM-EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCE 824

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   GF P   TY++LI      G++ +A E+F  M++    P    ++ L+ G  + R 
Sbjct: 825 MVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRN 884

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                +  + M EKG  P++ T + +    +       +  +LK L
Sbjct: 885 GTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 218/472 (46%), Gaps = 5/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   + +AF   E MV  G   DVV  + L+  LC+  +  +A  +   M   G  P+  
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L K G     + L+ +M   G   + VTY +L+  L   G  ++    L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   L PN  TY+ L++A  K   V  A ++L ++  K   PN+V+++ ++ G  K G  
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYN 312
           ++A  + R +  +G  PNVV+Y  L+         + A E+  +M  +G   +  IV  +
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV--D 488

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+  L  +GK + A+ +  +           +Y  +I  L   G +    K   ++  R
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+   YN  +  LC +GK +EA + +  + N      Q  Y  +I S CRKG+T +A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL+EM      P+  TY++L+ GL   G +E+A  +   M    + P       +L  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +SRR D+ L++ + M+  G   + T Y  L++ + +      +  VL+E+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 221/479 (46%), Gaps = 1/479 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + H +++A   L  M  K   P+VV  ++++    K   + KA +   MM   GI 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++   K      A+++   M   G   N    +SLV GL   G + +++  
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
                  GL  +   Y+ L++  +K   +  A K   +++ +   P+ V YNV +  LC 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EA  F  ++ + G +P+  +YN ++ S C +G   +A +LL EM      P ++T
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN L+  L   G  + A  +L+EMV   F PS+ ++  ++       ++D+++   + M 
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +     +   YN  L +LC  G  ++A  +++ +     +     +  +I   C+     
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF    +M     +P+  T+++L+ GL   G I EA  + + ME+   +P+   ++ L 
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILA 806

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            G  K      ++ ++  M+ KG +P  +TY  L+        +  + E+ K++Q R V
Sbjct: 807 TGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 195/473 (41%), Gaps = 76/473 (16%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LLY  C+   ++ AI ++    SS   P   +Y  L+  L       +A  ++ +M   G
Sbjct: 79  LLYSHCRLRLLRPAIALLR---SSR--PTTVAYNILLAALSDHA---HAPAVLAEMCKRG 130

Query: 164 YPTNTVTYNSLVRGL----------------------------------CMLGNLNQSLQ 189
            P + VT N+L+ GL                                  C +G+   +L 
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALS 190

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             DR+  +GL  +   Y+ L+    +   V AA  +LD +   G  PN+ +Y   +   C
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           +    EEA   +  +   G   +VV+ + L+  LC +GR+ EA  L  EMD    +P  V
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  LI SLA  G+    L +L EMV         +Y  ++  L  +GK D V   L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 PN  TY  L                                  I +LC+     
Sbjct: 371 LSDNLSPNGVTYTVL----------------------------------IDALCKAHNVD 396

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A Q+L EM +   +P+  T+SS+I G    GL+++A E   +M+E    P+V  +  L+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            G  K +  D +LEV+  M+ +G   N+     LV G+    ++E +  + K+
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKD 509



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M++ G   D+     LL  LC     +KA  V+E M+ SGI PD  ++  L+   CK 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            ++  A     +M       N  T+N+L+ GL  +G + ++   L  + + GL PN  TY
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L     K+     AM+L  +++ KG  P + +YN L++   K G   +A   F+D+  
Sbjct: 803 DILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  P   +Y+IL+          E  + L +M     SP+  T + +  + +  G T  
Sbjct: 863 RGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQ 922

Query: 327 ALKVLDEMVK 336
           A ++L  + +
Sbjct: 923 AQRLLKNLYR 932



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 129/318 (40%), Gaps = 16/318 (5%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+  L   G    AIRF    P+        S N LL S C       A  LL       
Sbjct: 52  LIPALATSGLAAAAIRFRPADPA--------SLNALLYSHCRLRLLRPAIALLRS----- 98

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             PT V YNIL+ +L+ H    HA  VL EM K        + N ++A LC  G+VD   
Sbjct: 99  SRPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
              D+          G    +A  C VG    A ++   +  +        Y  ++   C
Sbjct: 156 ALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R G+   A  +L  M + G  P+  TY+  I   C    +EEA +++  M       DV 
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +AL+ GLC+  R   +  +F+ M + G  PN  TY  L++ +A     +    +L E+
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 544 QLRQVVSESAVERLVMQY 561
             R VV +      +M +
Sbjct: 336 VSRGVVMDLVTYTALMDW 353



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 86/190 (45%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   L++AF    +M+ +   P++     LL  L    ++ +A  V+  M  SG+ P+  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L     K+ N   AM+L  +M   G+     TYN+L+      G + Q+ +    +
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P + TY  L+    + R      K L D+  KG  P+  + + +     K G T
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 255 EEAIRFFRDL 264
            +A R  ++L
Sbjct: 921 WQAQRLLKNL 930


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 242/471 (51%), Gaps = 22/471 (4%)

Query: 78  KLNDAFLQLERMVSKGHKP---DVVQATNLLYDLCKAN-KMKKAIKVMEMMVSSGIIPDA 133
           +L+DA    ER++    +    D V    L+   C+A  ++  A +++  +  SG   D 
Sbjct: 117 RLDDA----ERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAERMLASLALSGSA-DV 171

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  LV   C++G +  A +LV  M    +  N+ T ++L++GLC     + + + L  
Sbjct: 172 VTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKGLCSNKEWDDAEELLSE 228

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +I+ G  PN  T+  ++ +  +      AM +LD +        ++ YN +++ L + GR
Sbjct: 229 MIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGR 288

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA+  F  +P K   P++ SYN +++ LC +GRWE+A  L+A M   D  P  VT+N 
Sbjct: 289 VEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNT 345

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L + G  D A++V+++M K   +P   +Y+ ++  L   G VD  ++ L  +    
Sbjct: 346 VISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPW-- 403

Query: 374 CKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            KPN   Y   L  LC   +  +   ++  +   Q +  +  +  +I  LC+KG      
Sbjct: 404 -KPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGA 462

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++L EMTK+G +PD   Y+SLI G    G +++ALE+F  M     K +V  +N +L GL
Sbjct: 463 EVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMS---CKRNVVTYNYMLKGL 519

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           C++ + + + ++   M++   +PNE T++ L+  +  +  +E + EV +++
Sbjct: 520 CRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKM 570



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 244/473 (51%), Gaps = 15/473 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +  DA   +  MV K   PD V    ++  LC    +  A++V+E M   G  PD  
Sbjct: 317 RDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNF 376

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ LVN L ++G V  A++L+  +    +  NTV Y S+++GLC     +   + +  +
Sbjct: 377 TYSALVNALSERGCVDDALELLRTIP---WKPNTVCYRSVLKGLCRADRWDDVGKLVAEM 433

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+  L  +  T+  +++   ++  V    ++L ++   G  P+++ YN L+ G  + G  
Sbjct: 434 IRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSV 493

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F+++  K    NVV+YN +L+ LC   +WE+A +L+AEM   +  P  VT++ L
Sbjct: 494 DDALELFKNMSCKR---NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTL 550

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G  + A++V ++M K    P+   Y+ +I  L  +  VD  +K L+ M    C
Sbjct: 551 ISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PC 607

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
           KP+   Y+  L  LC   + ++A  +I  +  K N  P E  +  +I +LC KG    A 
Sbjct: 608 KPDTICYSAALKGLCRAERWEDAGELILEMIRK-NCLPDEVTFSILINNLCHKGFLESAT 666

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++   M KY   P+ + YSSLI G   +   E+AL++   M     +PD   ++A L GL
Sbjct: 667 EVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMP---CEPDTICYSAALKGL 723

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           C+++R + + E+   M  K    +E T+++L+  +     ++++ EV +++ +
Sbjct: 724 CRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSV 776



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 242/506 (47%), Gaps = 48/506 (9%)

Query: 75  RDHKLNDAFLQLERMVSK-GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           R+ +LNDA     R+V+     P+    + LL  LC   +   A +++  M+ SG  P+ 
Sbjct: 183 REGRLNDA----RRLVADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPND 238

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            ++  +++ LC+ G    AM ++++M         + YN ++  L  LG + ++L   D+
Sbjct: 239 LTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQ 298

Query: 194 L-----------IQKGLV---------------------PNAFTYSFLLEAAYKERGVHA 221
           +           + KGL                      P+  T++ ++        V  
Sbjct: 299 MPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDC 358

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           AM++++ +   G KP+  +Y+ L+  L + G  ++A+   R +P   ++PN V Y  +L+
Sbjct: 359 AMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIP---WKPNTVCYRSVLK 415

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC   RW++  +L+AEM     +   VT+ ++I  L   G  D+  +VL EM K    P
Sbjct: 416 GLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSP 475

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAII 400
               YN +I      G VD  ++    M    CK N  TYN  L  LC   + ++A  ++
Sbjct: 476 DIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLV 532

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +   +    +  +  +I+ LC+KG    A ++  +M KY   P+   YS+LI GL  +
Sbjct: 533 AEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQ 592

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
             +++AL++   + +   KPD   ++A L GLC++ R + + E+   MI K  +P+E T+
Sbjct: 593 ECVDDALKL---LNDMPCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTF 649

Query: 521 TILVEGIAHQDELELSAEVLKELQLR 546
           +IL+  + H+  LE + EV  EL L+
Sbjct: 650 SILINNLCHKGFLESATEV-SELMLK 674



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 90/191 (47%), Gaps = 3/191 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  DA   +  M+ K   PD V  + L+ +LC    ++ A +V E+M+    +P+  
Sbjct: 623 RAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVF 682

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y+ L+N   ++     A+QL+  M       +T+ Y++ ++GLC       + + +  +
Sbjct: 683 IYSSLINGFAEQYRAEDALQLLRNMP---CEPDTICYSAALKGLCRAKRWEDARELIAEM 739

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +K    +  T+S L+ +  +   V  A ++ + +   G  PN   ++ L+ G  ++ R 
Sbjct: 740 FRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRV 799

Query: 255 EEAIRFFRDLP 265
           +E ++    +P
Sbjct: 800 DEGLKLLSSMP 810



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 7/178 (3%)

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGV- 390
           E ++   RP+A     +I +LC+ G++D   + L     R    +  T N L A  C   
Sbjct: 92  ESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGAS-ERAGTADAVTRNTLVAGYCRAG 150

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G++ +A  ++ SL     S+    Y  ++   CR+G+   A +L+ +M    F P+SYT 
Sbjct: 151 GRLADAERMLASLA-LSGSADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTN 206

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           S+L++GLC     ++A E+   M      P+   F  ++  LC++   D ++ V   M
Sbjct: 207 STLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQM 264


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 225/478 (47%), Gaps = 44/478 (9%)

Query: 79  LNDAFLQLERMVSKG--HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           L+ A +    MV KG   +P++  +  LL  L ++N  +KA      +    +  D  S+
Sbjct: 109 LDKALIFFNEMVDKGLVFRPNIFNS--LLGSLVRSNCFEKAWLFFNEL-KERVKFDVYSF 165

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++   C+ GN+  + QL+  ++D G   N V Y +L+ G C  G++ ++  F D++ +
Sbjct: 166 GIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGE 225

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            GLV N +T++ L+   +K+        L + +   G  PNL +YN L+   C EG+   
Sbjct: 226 MGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICR 285

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F ++  +G E NVV+YN L+  +C E R  EA +L+ +M     SP ++TYN LIG
Sbjct: 286 AFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIG 345

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G  D A  +LD++      PS  +YN +I      G    V     +M  R   P
Sbjct: 346 GFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISP 405

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           ++ T       C V                           +I +  R  +  +AFQ+  
Sbjct: 406 SKVT-------CTV---------------------------LIDAYVRLQEMEKAFQIYS 431

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M K+G  PD Y Y  LI GLCM+G ++E+ ++F  M E   +P    +N ++ G CK  
Sbjct: 432 SMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKED 491

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK----ELQLRQVVS 550
            +  +L + + M  KG +PN  +Y+ ++ G+  +D     AEVL     ELQL+   S
Sbjct: 492 NSYRALRLLREMEAKGLVPNVASYSSII-GVLCKDGKWEEAEVLLDKMIELQLKPSAS 548



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 149/302 (49%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F   E+M   G  P++     L+ + C   K+ +A  + + M   G+  +  +Y  L+
Sbjct: 250 DGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLI 309

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             +C++  V  A +LV++M+      N +TYN+L+ G C +GNL+++   LD+L   GL 
Sbjct: 310 GGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLS 369

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ L+E   K         L  ++  +G  P+ V+  VL+    +    E+A + 
Sbjct: 370 PSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQI 429

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           +  +   G  P+V  Y +L+  LCM+G  +E+++L   M      P+ V YN +I     
Sbjct: 430 YSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCK 489

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
              +  AL++L EM      P+ ASY+ II  LC +GK +     LD+M   + KP+   
Sbjct: 490 EDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASI 549

Query: 381 YN 382
            N
Sbjct: 550 LN 551



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 184/419 (43%), Gaps = 2/419 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  ++N   K   +  A+    +M D G       +NSL+  L       ++  F + L 
Sbjct: 96  YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELK 155

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++ +  + +++  +++   +   +  + +LL  +   G  PN+V Y  L+ G CK G  E
Sbjct: 156 ER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIE 214

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A  FF  +   G   N  ++ +L+  L  +G  ++  +L  +M      P + TYN L+
Sbjct: 215 RARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLM 274

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 GK   A  + DEM +     +  +YN +I  +C E +V    K +DQM      
Sbjct: 275 NEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVS 334

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN  TYN L    C VG + +A +++  L +   S     Y  +I    + G       L
Sbjct: 335 PNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADL 394

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM   G +P   T + LI        +E+A +I+  ME++   PDV  +  L+ GLC 
Sbjct: 395 AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCM 454

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
                 S ++F+ M E    P++  Y  ++ G   +D    +  +L+E++ + +V   A
Sbjct: 455 KGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVA 513



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 116/240 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ +A   +++M      P+++    L+   C    + KA  +++ + S+G+ P   
Sbjct: 314 REERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLV 373

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+    K GN      L  +ME  G   + VT   L+     L  + ++ Q    +
Sbjct: 374 TYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSM 433

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GLVP+ + Y  L+     +  +  + KL   +     +P+ V YN ++ G CKE  +
Sbjct: 434 EKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNS 493

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+R  R++ +KG  PNV SY+ ++  LC +G+WEEA  LL +M      P+    N++
Sbjct: 494 YRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  ++  AF     M   G  PDV     L++ LC    MK++ K+   M    + 
Sbjct: 415 DAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVE 474

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    Y  +++  CK+ N   A++L+ +ME  G   N  +Y+S++  LC  G   ++   
Sbjct: 475 PSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVL 534

Query: 191 LDRLIQKGLVPNA 203
           LD++I+  L P+A
Sbjct: 535 LDKMIELQLKPSA 547


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 215/463 (46%), Gaps = 21/463 (4%)

Query: 99  VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           +   N    LC   K +KA ++++ M+  G +PDAS+YT ++  LC+   V  A  L ++
Sbjct: 418 INTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQE 477

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+  G   +  TY  L+   C  G + Q+  + D +   G  PN  TY+ LL A  K + 
Sbjct: 478 MKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQ 537

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR----------------FFR 262
           ++ A  +   ++     PN ++Y+ L+ GLCK G  ++A                  +F 
Sbjct: 538 LYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFE 597

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
              +    PNVV+Y  L+  LC   +  +A++LL  M      P  + Y+ L+      G
Sbjct: 598 GKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVG 657

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + D A +V   M K  + PS  +Y  +I R+  +G++DL +K L QM    C PN  TY 
Sbjct: 658 EIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYT 717

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTK 440
            +   LC  G+ ++A  ++ SL  K+  SP    Y  +I  L + GK     +L  +M  
Sbjct: 718 AMVDGLCKTGETEKALNLL-SLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKT 776

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P+  TY  LI   C  GL+++A  +   M++  +   +  +   + G   S+R   
Sbjct: 777 KGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRFLA 834

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           SL + + M      P    Y +L++  +    LE + E+ KE+
Sbjct: 835 SLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEM 877



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 222/504 (44%), Gaps = 58/504 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            N+A   L RM    + P+VV    LL    K  ++    +++ MM++ G  P  S +  
Sbjct: 287 FNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNS 346

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV----------------------- 175
           LV+  C   +  YA +L  +M   G P   V YN  +                       
Sbjct: 347 LVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYE 406

Query: 176 ------------------RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
                             R LC +G   ++ Q +  +++KG VP+A TY+ ++    + +
Sbjct: 407 EMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAK 466

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            V  A  L  ++   G  P++ +Y +L+   CK G  E+A  +F ++ S G  PNVV+Y 
Sbjct: 467 RVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-- 335
            LL +     +  +AN++   M G    P  +TY+ LI  L   G+   A +V  +++  
Sbjct: 527 ALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGT 586

Query: 336 ----------KGR----FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
                     +G+      P+  +Y  ++  LC   KV      LD M    C+PN+  Y
Sbjct: 587 SDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVY 646

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           + L    C VG++  A  +   +           Y  +I  + + G+   A ++L +M K
Sbjct: 647 DALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 706

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
               P+  TY++++ GLC  G  E+AL +  +ME+    P+V  + AL+ GL K+ + D 
Sbjct: 707 DSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDA 766

Query: 501 SLEVFQMMIEKGQMPNETTYTILV 524
            LE+F  M  KG  PN  TY IL+
Sbjct: 767 GLELFMQMKTKGCAPNYVTYRILI 790



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 222/499 (44%), Gaps = 32/499 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   AF  ++ M+ KG  PD    T ++  LC+A ++ KA  + + M   G+ PD  +YT
Sbjct: 432 KFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYT 491

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK G +  A    ++M   G   N VTY +L+        L Q+     R++  
Sbjct: 492 ILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD 551

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG----------GK------PNLVSY 241
              PNA TYS L++   K   +  A ++   +I             GK      PN+V+Y
Sbjct: 552 ACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTY 611

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             L+ GLCK  +  +A      + + G EPN + Y+ L+   C  G  + A E+   M  
Sbjct: 612 GALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTK 671

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P++ TY  LI  +   G+ D A+KVL +M+K    P+  +Y  ++  LC  G+ + 
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEK 731

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +  L  M  + C PN  TY  L    G  GKV     +   +  K  +     Y+ +I 
Sbjct: 732 ALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILIN 791

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG-----LCMEGLIEEALEIFVVMEE 475
             C  G    A  LL EM +  +      Y + ++G     L   GL+EE       ME 
Sbjct: 792 HCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEE-------MES 844

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ---MPNETTYTILVEGIAHQDE 532
           +D  P    +  L+    K+ R + +LE+ + M+E      M ++  +T L++ +    +
Sbjct: 845 HDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQ 904

Query: 533 LELSAEVLKELQLRQVVSE 551
           +E +  +  E++ R +V +
Sbjct: 905 VEEAVALYSEMRRRGIVPD 923



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 223/485 (45%), Gaps = 30/485 (6%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A  +L R+   G++P  V    L+  L  A +++ A +V + M +SG   D S+     
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFA 246

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCK+G  G A+ L+E+ ED  +  +TV    ++ GL      N+++ FL R+     +
Sbjct: 247 QALCKEGRWGDALDLLER-ED--FKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYI 303

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN  TY  LL    K++ +    ++++ ++ +G  P+   +N L+   C       A + 
Sbjct: 304 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKL 363

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL------ 314
           F  + + G  P  V YNI + S+C  GR E  N  L ++        +V   +L      
Sbjct: 364 FNRMNTCGCPPGYVVYNIFIGSIC--GREELPNPELLDLAEKVYEEMLVASCVLNKINTA 421

Query: 315 --IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
                L   GK + A +++ EM++  F P A++Y  +I  LC   +VD       +M   
Sbjct: 422 NFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKV 481

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+  TY  L    C  G +++A +    + +   S     Y  ++ +  +  + YQA
Sbjct: 482 GVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQA 541

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM------EEYDY------- 478
             + + M      P++ TYS+LI GLC  G I++A E++  +       E D+       
Sbjct: 542 NDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDT 601

Query: 479 ---KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P+V  + AL+ GLCK+++   + ++   M+  G  PN+  Y  LV+G     E++ 
Sbjct: 602 DTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDS 661

Query: 536 SAEVL 540
           + EV 
Sbjct: 662 AQEVF 666



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 193/414 (46%), Gaps = 14/414 (3%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV   C +G  G A++ + +++D+GY  + VTYN+LV+ L   G +  + +    +   G
Sbjct: 175 LVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASG 234

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              +  T     +A  KE     A+ LL+    +  K + V    +++GL +     EA+
Sbjct: 235 FCMDRSTVGSFAQALCKEGRWGDALDLLER---EDFKLDTVLCTQMISGLMEASLFNEAM 291

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIG 316
            F   +    + PNVV+Y  LL     + +      ++  M  +G + SP++  +N L+ 
Sbjct: 292 SFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSL--FNSLVH 349

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMF 370
           +        +A K+ + M      P    YN  I  +C   ++      DL  K  ++M 
Sbjct: 350 TYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEML 409

Query: 371 HRRCKPNE-GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C  N+  T N    LCGVGK ++AF I++ +  K        Y  VIT LC+  +  
Sbjct: 410 VASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVD 469

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +AF L  EM K G  PD YTY+ LI   C  GLIE+A   F  M      P+V  + ALL
Sbjct: 470 KAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALL 529

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
               KS++   + ++F  M+     PN  TY+ L++G+    E++ + EV  +L
Sbjct: 530 HAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKL 583



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 191/413 (46%), Gaps = 25/413 (6%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-------- 128
           ++ ND F    RMV     P+ +  + L+  LCKA +++KA +V   ++ +         
Sbjct: 539 YQANDIF---HRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFY 595

Query: 129 --------IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
                   I P+  +Y  LVN LCK   V  A  L++ M   G   N + Y++LV G C 
Sbjct: 596 FEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCK 655

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           +G ++ + +   R+ + G +P+  TY+ L++  +K+  +  AMK+L  ++     PN+V+
Sbjct: 656 VGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVT 715

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y  ++ GLCK G TE+A+     +  KG  PNVV+Y  L+  L   G+ +   EL  +M 
Sbjct: 716 YTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMK 775

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
               +P  VTY ILI      G  D A  +LDEM +  +      Y   +          
Sbjct: 776 TKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLAS 835

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI---IQSLGNKQNSSPQEFYK 416
           L +  L++M      P    Y  L       G+++ A  +   +  + +  N + ++ + 
Sbjct: 836 LGL--LEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHT 893

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
            +I +LC   +  +A  L  EM + G  PD   +  L++GL       EAL++
Sbjct: 894 SLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 5/263 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L +M+     P+VV  T ++  LCK  + +KA+ ++ +M   G  
Sbjct: 686 DRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCS 745

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++ L K G V   ++L  +M+  G   N VTY  L+   C  G L+ +   
Sbjct: 746 PNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLL 805

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD + Q         Y   ++   K     A++ LL+++ +    P    Y +L+    K
Sbjct: 806 LDEMKQTHWPKYLQGYRTTVQGFSKR--FLASLGLLEEMESHDTAPIAPVYGMLIDSFSK 863

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNI---LLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            GR E A+   +++       N+ S ++   L+++LC+  + EEA  L +EM      P 
Sbjct: 864 AGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPD 923

Query: 308 IVTYNILIGSLAYHGKTDHALKV 330
           +  +  L+  L    K + AL++
Sbjct: 924 LSAFVCLVKGLIERNKWNEALQL 946



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 141/391 (36%), Gaps = 84/391 (21%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G K     Y+ L   L  E     A R  R++     +      N+L+R  C++G W EA
Sbjct: 129 GYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEA 188

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            E L  +      P+ VTYN L+  LA  G+ + A +V  EM    F    ++       
Sbjct: 189 LEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQA 248

Query: 353 LCSEGK----VDLV---------VKCLDQM---------------FHR-RCK---PNEGT 380
           LC EG+    +DL+         V C   +                HR RC    PN  T
Sbjct: 249 LCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVT 308

Query: 381 YNGLAMLCG------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           Y  L  L G      +G  +    ++ + G   N SP  F   V T  C       A++L
Sbjct: 309 YRTL--LTGFLKKKQLGWCKRIINMMMTEGC--NPSPSLFNSLVHT-YCNAEDYAYAYKL 363

Query: 435 LYEMTKYGFTPDSYTYSSLI---------------------------------------- 454
              M   G  P    Y+  I                                        
Sbjct: 364 FNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANF 423

Query: 455 -RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
            R LC  G  E+A +I   M    + PD   +  ++  LC+++R D +  +FQ M + G 
Sbjct: 424 ARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGV 483

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            P+  TYTIL++       +E +     E++
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQAQSWFDEMR 514


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 228/468 (48%), Gaps = 3/468 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M++ G +P+++    ++   CK   +  A      ++  G   D+ +YT L+   CK   
Sbjct: 181 MLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHE 240

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +G A ++ E M   G   N V+Y +L+ G C +G ++++L+   ++ + G  P+  TY+ 
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300

Query: 209 LLEAAYKERGVHA-AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           L+ AA+ E G    A+K  ++++  G +PN+ +Y VL+   CK G+ +E +     +  K
Sbjct: 301 LV-AAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK 359

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G   +VV +N L+   C  G  E+A  +L  M      P   TYN LI         D A
Sbjct: 360 GLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRA 419

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
           + +L++M + +  P+  +YN +I  LC    VD   +    M      P++ T+   +  
Sbjct: 420 MALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDC 479

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC +GKV++A  + +SL  K   + +  Y  +I   C+  K   A  L   M   G  P+
Sbjct: 480 LCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPN 539

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           S T++ L+ GL  EG +E+A+ +  VM ++D KP V  +  L+  + +    D +     
Sbjct: 540 SITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLD 599

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            MI  G  PN  TYT  ++    Q  L  + E++ +++   ++ +S +
Sbjct: 600 QMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFI 647



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 222/468 (47%), Gaps = 10/468 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  +A    E MV  G +P+V   T L+   CK  KM + ++++  M+  G++     + 
Sbjct: 310 KETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFN 369

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK+G +  A+ +++ M+      N+ TYN L+ G C   ++++++  L+++ + 
Sbjct: 370 ALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYEN 429

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L PN  TY+ L+    K R V +A +L   +I  G  P+  ++   +  LCK G+ E+A
Sbjct: 430 KLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQA 489

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F  L  K  E N   Y  L+   C   ++ +A+ L   M      P  +T+N+L+  
Sbjct: 490 HQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDG 549

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   GK + A+ ++D M K   +P+  +Y  +I  +  E   D     LDQM    C+PN
Sbjct: 550 LRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPN 609

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +   C  G++ EA  ++  +  +        Y  ++ +    G+   AF +L 
Sbjct: 610 VVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLI 669

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  P   TYS L++ L  E   +E +     ++       VDN N     + K  
Sbjct: 670 RMFDTGCEPSRQTYSILLKHLIFEKYNKEGMG----LDLNSTNISVDNAN-----IWKIA 720

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             ++   +F+ M+E+G +PN  TY+ L++G+   + L L+  +   ++
Sbjct: 721 DFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMK 768



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 226/487 (46%), Gaps = 30/487 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++ A   L +M      P++V    L++ LCKA  +  A ++  +M+  G +PD  
Sbjct: 412 RKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQR 471

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++   ++CLCK G V  A Q+ E +++     N   Y +L+ G C     + +     R+
Sbjct: 472 TFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRM 531

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G  PN+ T++ LL+   KE  V  AM L+D +     KP + +Y +L+  + +E   
Sbjct: 532 LFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDF 591

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A  F   + S G +PNVV+Y   +++ C +GR  EA E++ ++           Y++L
Sbjct: 592 DRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVL 651

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + +    G+ D A  VL  M      PS  +Y+ ++  L               +F +  
Sbjct: 652 VNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHL---------------IFEKYN 696

Query: 375 KPNEG----TYNGLAMLCGVGKVQEAFAIIQSLGNK---QNSSPQ-EFYKYVITSLCRKG 426
           K   G    + N       + K+ + F II  L  K   Q   P    Y  +I  LC+  
Sbjct: 697 KEGMGLDLNSTNISVDNANIWKIAD-FEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVE 755

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
               AF+L   M + G +P    ++SL+   C  G+ EEAL +   M EY++   ++++ 
Sbjct: 756 HLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYK 815

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            L+ GL +    + + E+F+ ++  G   +E  + +L++G+  +  ++  +      QLR
Sbjct: 816 LLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECS------QLR 869

Query: 547 QVVSESA 553
            ++ ++ 
Sbjct: 870 DIMEKTG 876



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 228/502 (45%), Gaps = 45/502 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++    L  M+ KG    VV    L+   CK   M+ AI V++ M  + + P++ +Y 
Sbjct: 345 KMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYN 404

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+K ++  AM L+ KM +     N VTYN+L+ GLC    ++ + +    +I+ 
Sbjct: 405 ELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD 464

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G VP+  T+   ++   K   V  A ++ + +  K  + N   Y  L+ G CK  +  +A
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F+ +  +G  PN +++N+LL  L  EG+ E+A  L+  M   D  PT+ TY ILI  
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEE 584

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVK--------- 364
           +      D A   LD+M+    +P+  +Y   I   C +G++    ++VVK         
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644

Query: 365 ------------CLDQ----------MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
                       C+ Q          MF   C+P+  TY+ L       K  +     + 
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNK-----EG 699

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE-MTKYGFTPDSYTYSSLIRGLCMEG 461
           +G   NS+       V  +   K   ++   +L+E M + G  P+  TYS LI+GLC   
Sbjct: 700 MGLDLNSTNIS----VDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVE 755

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +  A  +F  M+E    P  +  N+LL   CK    + +L +   M+E   + +  +Y 
Sbjct: 756 HLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYK 815

Query: 522 ILVEGIAHQDELELSAEVLKEL 543
           +LV G+  Q   E + E+ + L
Sbjct: 816 LLVCGLFEQGNQEKAEEIFRSL 837



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 204/418 (48%), Gaps = 5/418 (1%)

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
           V+ ++         +SY  L   L + G +     L + M + G   N +++N++V   C
Sbjct: 142 VLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHC 201

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
            +GN+  +  +   L++ G   ++FTY+ L+    K   +  A K+ + +  +G   N V
Sbjct: 202 KIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEV 261

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           SY  L+ G C+ G+ +EA+  F  +   G  P+V +Y +L+ + C  G+  EA +   EM
Sbjct: 262 SYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEM 321

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P + TY +LI      GK D  +++L  M++     S   +N +I   C  G +
Sbjct: 322 VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMM 381

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYK 416
           +  +  LD M   +  PN  TYN L  +CG  +   +  A A++  +   + S     Y 
Sbjct: 382 EDAICVLDSMKLNKVCPNSRTYNEL--ICGFCRKKSMDRAMALLNKMYENKLSPNLVTYN 439

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I  LC+      A++L + M K GF PD  T+ + I  LC  G +E+A ++F  ++E 
Sbjct: 440 TLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEK 499

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             + +   + AL+ G CK+ +   +  +F+ M+ +G  PN  T+ +L++G+  + ++E
Sbjct: 500 HAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVE 557



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 208/454 (45%), Gaps = 5/454 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H+L DA+   E M  +G   + V  TNL++  C+  K+ +A+++   M   G  PD  +Y
Sbjct: 239 HELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTY 298

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T LV   C+ G    A++  E+M + G   N  TY  L+   C +G +++ ++ L  +++
Sbjct: 299 TVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLE 358

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KGLV +   ++ L++   K   +  A+ +LD +      PN  +YN L+ G C++   + 
Sbjct: 359 KGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDR 418

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+     +      PN+V+YN L+  LC     + A  L   M      P   T+   I 
Sbjct: 419 AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFID 478

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   GK + A +V + + +     +   Y  +I   C   K         +M    C P
Sbjct: 479 CLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFP 538

Query: 377 NEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           N  T+N   +L G+   GKV++A +++  +G          Y  +I  + R+    +A  
Sbjct: 539 NSITFN--VLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANM 596

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L +M   G  P+  TY++ I+  C +G + EA E+ V ++E     D   ++ L+    
Sbjct: 597 FLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYG 656

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
              + D +  V   M + G  P+  TY+IL++ +
Sbjct: 657 CIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHL 690



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 149/341 (43%), Gaps = 26/341 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ DA   ++ M     KP V   T L+ ++ + +   +A   ++ M+SSG  
Sbjct: 548 DGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQ 607

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT  +   C++G +  A ++V K+++ G   ++  Y+ LV     +G L+ +   
Sbjct: 608 PNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGV 667

Query: 191 LDRLIQKGLVPNAFTYSFLLE----AAYKERGVHAAMK---------------------- 224
           L R+   G  P+  TYS LL+      Y + G+   +                       
Sbjct: 668 LIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITM 727

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           L + ++ +G  PN+ +Y+ L+ GLCK      A R F  +   G  P+   +N LL S C
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G  EEA  LL  M   +    + +Y +L+  L   G  + A ++   ++   +     
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            +  ++  L  +G VD   +  D M    C+ +  T+  L+
Sbjct: 848 VWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLS 888



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 25/318 (7%)

Query: 257 AIRFFRDLP-SKGFEPNVVSYNILLRSLCMEG-----------------RWEEANELLAE 298
           A+ FF+ +    GF   V SY  LL  L   G                    EA  +L  
Sbjct: 86  ALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNL 145

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           +   + S ++ +YN L   L+  G  D    +  +M+     P+  S+N ++   C  G 
Sbjct: 146 LTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGN 205

Query: 359 VDLVVK---CLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
           V +V K   C    F   C  +  TY  L +  C + ++ +A+ + + +  +     +  
Sbjct: 206 V-VVAKAYFCGLMKFGFCC--DSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVS 262

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I   C  GK  +A +L ++M + G  PD  TY+ L+   C  G   EAL+ F  M 
Sbjct: 263 YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMV 322

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           E   +P+V  +  L+   CK  + D  +E+   M+EKG + +   +  L++G   +  +E
Sbjct: 323 ENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMME 382

Query: 535 LSAEVLKELQLRQVVSES 552
            +  VL  ++L +V   S
Sbjct: 383 DAICVLDSMKLNKVCPNS 400


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 228/476 (47%), Gaps = 2/476 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ MV  G  P     + L+  L K  K+  A +++  +   G +P+   Y  L+N LCK
Sbjct: 318 MDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCK 377

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G++  A  L   M       N +TY+ L+   C  G L+ ++ + DR+IQ G+    + 
Sbjct: 378 GGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYA 437

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K   + AA  L  ++  KG +P   ++  L++G CK+ + ++A + +  + 
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMI 497

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PNV ++  L+  LC   +  EA+EL  E+      PT VTYN+LI      GK D
Sbjct: 498 DNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKID 557

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++L++M +    P   +Y P+I+ LCS G+V      +D +  +  K NE  Y+ L 
Sbjct: 558 KAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALL 617

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G++ EA +    +  +  +     +  +I    ++      F LL +M   G  
Sbjct: 618 HGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLR 677

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD+  Y+S+I     EG  ++A E + +M   +  P+V  + AL+ GLCK+   D +  +
Sbjct: 678 PDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLL 737

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           F+ M      PN  TY   ++ +  +  ++  A  L    L+ +++ +    ++++
Sbjct: 738 FKRMQAANVPPNSITYGCFLDNLTKEGNMK-EAIGLHHAMLKGLLANTVTHNIIIR 792



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 223/484 (46%), Gaps = 4/484 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  R  +L+ A    +RM+  G    V    +L+   CK   +  A  +   M + G+ 
Sbjct: 408 DSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVE 467

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P A+++T L++  CK   V  A +L  KM D G   N  T+ +L+ GLC    + ++ + 
Sbjct: 468 PTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASEL 527

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D L+++ + P   TY+ L+E   ++  +  A +LL+D+  KG  P+  +Y  L++GLC 
Sbjct: 528 FDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCS 587

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  +A  F  DL  +  + N + Y+ LL   C EGR  EA     EM     +  +V 
Sbjct: 588 TGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVC 647

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           + +LI              +L +M     RP    Y  +I     EG      +C D M 
Sbjct: 648 HAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMV 707

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKT 428
              C PN  TY  L   LC  G++  A  + + +    N  P    Y   + +L ++G  
Sbjct: 708 TEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRM-QAANVPPNSITYGCFLDNLTKEGNM 766

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A  L + M K G   ++ T++ +IRG C  G   EA ++   M E    PD   ++ L
Sbjct: 767 KEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTL 825

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +   C+S     S++++  M+ +G  P+   Y +L+ G     EL+ + E+  ++  R +
Sbjct: 826 IYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGI 885

Query: 549 VSES 552
           + ++
Sbjct: 886 IPDN 889



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 238/503 (47%), Gaps = 36/503 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA + ++ M +    P+V   + LL  L K  K     ++ +  V++G+ PD  + +
Sbjct: 170 RIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCS 229

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V  +C+  +   A + +  ME  G+  + VTYN L+ GLC    ++++++    L  K
Sbjct: 230 AVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGK 289

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +  TY  L+    + +   A ++L+D+++  G  P   + + L+ GL K+G+ ++A
Sbjct: 290 GLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDA 349

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +   GF PN+  YN L+ SLC  G  ++A  L + M   +  P  +TY+ILI S
Sbjct: 350 YELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDS 409

Query: 318 LAYHGKTDHALKVLDEMVKG-----------------RF------------------RPS 342
               G+ D A+   D M++                  +F                   P+
Sbjct: 410 FCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPT 469

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQ 401
           A ++  +I+  C + +V    K  ++M      PN  T+  L + LC   K+ EA  +  
Sbjct: 470 ATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFD 529

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            L  ++    +  Y  +I   CR GK  +AF+LL +M + G  PD+YTY  LI GLC  G
Sbjct: 530 ELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTG 589

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            + +A +    + + + K +   ++ALL G C+  R   +L     MI++G   +   + 
Sbjct: 590 RVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHA 649

Query: 522 ILVEGIAHQDELELSAEVLKELQ 544
           +L++G   Q + +   ++LK++ 
Sbjct: 650 VLIDGALKQPDRKTFFDLLKDMH 672



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 221/500 (44%), Gaps = 36/500 (7%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           ++  M + G    +V    L++ LCK +++ +A++V   +   G+  D  +Y  LV   C
Sbjct: 247 KIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFC 306

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           +       +QL+++M + G+       + LV GL   G ++ + + + ++ + G VPN F
Sbjct: 307 RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLF 366

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            Y+ L+ +  K   +  A  L  ++     +PN ++Y++L+   C+ GR + AI +F  +
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM 426

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G    V +YN L+   C  G    A  L  EM      PT  T+  LI       + 
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQV 486

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A K+ ++M+     P+  ++  +I+ LCS  K+    +  D++  R+ KP E TYN L
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVL 546

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C  GK+ +AF +++ +  K        Y+ +I+ LC  G+  +A   + ++ K   
Sbjct: 547 IEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNV 606

Query: 444 TPDSYTYSSLIRGLCMEGLIEEAL-----------------------------------E 468
             +   YS+L+ G C EG + EAL                                   +
Sbjct: 607 KLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFD 666

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   M +   +PD   + +++    K      + E + +M+ +   PN  TYT L+ G+ 
Sbjct: 667 LLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLC 726

Query: 529 HQDELELSAEVLKELQLRQV 548
              E++ +  + K +Q   V
Sbjct: 727 KAGEMDRAGLLFKRMQAANV 746



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 220/457 (48%), Gaps = 2/457 (0%)

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
           ++++  A+ ++++M ++ ++P+  + + L+N L K        +L ++  + G   +  T
Sbjct: 168 SSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYT 227

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
            +++VR +C L +  ++ + +  +   G   +  TY+ L+    K   V  A+++   + 
Sbjct: 228 CSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLG 287

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            KG   ++V+Y  L+ G C+  + E  I+   ++   GF P   + + L+  L  +G+ +
Sbjct: 288 GKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKID 347

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +A EL+ ++      P +  YN LI SL   G  D A  +   M     RP+  +Y+ +I
Sbjct: 348 DAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILI 407

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
              C  G++D+ +   D+M           YN L    C  G +  A ++   + NK   
Sbjct: 408 DSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVE 467

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                +  +I+  C+  +  +AF+L  +M   G TP+ YT+++LI GLC    + EA E+
Sbjct: 468 PTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASEL 527

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  + E   KP    +N L+ G C+  + D + E+ + M +KG +P+  TY  L+ G+  
Sbjct: 528 FDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCS 587

Query: 530 QDELELSAEVLKELQLRQV-VSESAVERLVMQYDFEG 565
              +  + + + +L  + V ++E     L+  Y  EG
Sbjct: 588 TGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEG 624



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 188/388 (48%), Gaps = 9/388 (2%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           ++T+ +N LV+   +   +  ++  +  +    L+P   T S LL    K R      +L
Sbjct: 153 SSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWEL 212

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEG---RTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            D+ +  G +P+  + + ++  +C+     R +E IR+   + + GF+ ++V+YN+L+  
Sbjct: 213 FDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRW---MEANGFDLSIVTYNVLIHG 269

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC   R  EA E+   + G   +  +VTY  L+       + +  ++++DEMV+  F P+
Sbjct: 270 LCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPT 329

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
            A+ + ++  L  +GK+D   + + ++      PN   YN L   LC  G + +A  ++ 
Sbjct: 330 EAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKA-ELLY 388

Query: 402 SLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           S  +  N  P    Y  +I S CR G+   A      M + G     Y Y+SLI G C  
Sbjct: 389 SNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKF 448

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G +  A  +F+ M     +P    F +L+ G CK  +   + +++  MI+ G  PN  T+
Sbjct: 449 GDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTF 508

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQV 548
           T L+ G+   +++  ++E+  EL  R++
Sbjct: 509 TALISGLCSTNKMAEASELFDELVERKI 536



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 150/352 (42%), Gaps = 20/352 (5%)

Query: 187 SLQFLDRL-IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           +L+F + L + K +  +  +Y+ ++ A    R    A  LL  ++ +   P  V      
Sbjct: 86  ALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCV------ 139

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
                          F D   +    + + +N+L+++  +  R  +A  ++  M   +  
Sbjct: 140 ------------FSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLL 187

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P + T + L+  L    K     ++ DE V    RP   + + ++  +C         + 
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           +  M       +  TYN L   LC   +V EA  + +SLG K  ++    Y  ++   CR
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
             +     QL+ EM + GF+P     S L+ GL  +G I++A E+ V +  + + P++  
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV 367

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           +NAL+  LCK    D +  ++  M      PN  TY+IL++       L+++
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVA 419


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 220/470 (46%), Gaps = 36/470 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + +AF  +  M  KG  P V     ++  LCK  K ++A +V   M+ SG+ PD+++Y  
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   CKKG+V    ++   M       + V ++S++      GNL+++L + + + + G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L+P+   Y+ L++   ++  +  AM L ++++ +G   ++V+YN +L GLCK     EA 
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           + F ++  +   P+  +  IL+   C  G  + A EL  +M        +VTYN L+   
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  D A ++  +MV     P+  SY+ ++  LCS+G +    +  D+M  +  KP  
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT- 584

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
                  M+C                   NS        +I   CR G        L +M
Sbjct: 585 ------VMIC-------------------NS--------MIKGYCRSGNASDGESFLEKM 611

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD--YKPDVDNFNALLLGLCKSR 496
              GF PD  +Y++LI G   E  + +A  +   MEE      PDV  +N++L G C+  
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +   +  V + MIE+G  P+ +TYT ++ G   QD L  +  +  E+  R
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 218/487 (44%), Gaps = 53/487 (10%)

Query: 75  RDHKLNDAFLQLERMVSKG--HKPDVVQATNLLYDLCKAN---------------KMKKA 117
           R  +L+DA   L RM+ +    + ++V + +  +  C +N               K+++A
Sbjct: 125 RSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREA 184

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
            +   ++ S G      +   L+  L + G V  A  + +++   G   N  T N +V  
Sbjct: 185 HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA 244

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV-HAAMKLLDDIIAKGGKP 236
           LC  G + +   FL ++ +KG+ P+  TY+ L+ +AY  +G+   A +L++ +  KG  P
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI-SAYSSKGLMEEAFELMNAMPGKGFSP 303

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            + +YN ++ GLCK G+ E A   F ++   G  P+  +Y  LL   C +G   E  ++ 
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           ++M   D  P +V ++ ++      G  D AL   + + +    P    Y  +I   C +
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           G + + +   ++M  + C  +  TYN                                  
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNT--------------------------------- 450

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            ++  LC++    +A +L  EMT+    PDSYT + LI G C  G ++ A+E+F  M+E 
Sbjct: 451 -ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
             + DV  +N LL G  K    D + E++  M+ K  +P   +Y+ILV  +  +  L  +
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569

Query: 537 AEVLKEL 543
             V  E+
Sbjct: 570 FRVWDEM 576



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 1/385 (0%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           +N   ++ L+R       L ++ +    L  KG   +    + L+ +  +   V  A  +
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
             +I   G   N+ + N+++  LCK+G+ E+   F   +  KG  P++V+YN L+ +   
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +G  EEA EL+  M G   SP + TYN +I  L  HGK + A +V  EM++    P + +
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG 404
           Y  ++   C +G V    K    M  R   P+   ++ + ++    G + +A     S+ 
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                     Y  +I   CRKG    A  L  EM + G   D  TY++++ GLC   ++ 
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA ++F  M E    PD      L+ G CK      ++E+FQ M EK    +  TY  L+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522

Query: 525 EGIAHQDELELSAEVLKELQLRQVV 549
           +G     +++ + E+  ++  ++++
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEIL 547



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 158/374 (42%), Gaps = 36/374 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   L+ A +    +   G  PD V  T L+   C+   +  A+ +   M+  G   D  
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ LCK+  +G A +L  +M +     ++ T   L+ G C LGNL  +++   ++
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +K +  +  TY+ LL+   K   +  A ++  D+++K   P  +SY++L+  LC +G  
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA R + ++ SK  +P V+  N +++  C  G   +    L +M      P  ++YN L
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626

Query: 315 IGSLAYHGKTDHALKVLDEM--VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I           A  ++ +M   +G   P   +YN I+   C + ++      L +M  R
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              P+  TY  +                                  I     +    +AF
Sbjct: 687 GVNPDRSTYTCM----------------------------------INGFVSQDNLTEAF 712

Query: 433 QLLYEMTKYGFTPD 446
           ++  EM + GF+PD
Sbjct: 713 RIHDEMLQRGFSPD 726



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 2/169 (1%)

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           +  L  +G V+ A+ + Q +              ++ +LC+ GK  +    L ++ + G 
Sbjct: 207 IGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV 266

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD  TY++LI     +GL+EEA E+   M    + P V  +N ++ GLCK  + + + E
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326

Query: 504 VFQMMIEKGQMPNETTY-TILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           VF  M+  G  P+ TTY ++L+E     D +E + +V  +++ R VV +
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE-TEKVFSDMRSRDVVPD 374


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 227/466 (48%), Gaps = 1/466 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A   L +M  +G  PDV+  + ++   C+  ++++ +K++E M   G+ P+  +Y 
Sbjct: 268 RVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYN 327

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK G V  A +++ +M   G   + V Y +L+ G C LGN++ + +  D + ++
Sbjct: 328 GVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR 387

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+  TY+ ++    +   V  A KL  +++ K  +P+ V+Y  L+ G CKEG+ +EA
Sbjct: 388 KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEA 447

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +   G  PN+V+Y  L   LC  G  + ANELL EM        I TYN L+  
Sbjct: 448 FSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNG 507

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  D A+K++ +M    F P A +Y  ++   C   ++    + L QM  R  +P 
Sbjct: 508 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPT 567

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T+N L    C  G +++   +++ +  K        Y  +I   C +       ++  
Sbjct: 568 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 627

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  PD  TY+ LI+G C    ++EA  +   M    +   V ++NAL+ G  K +
Sbjct: 628 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRK 687

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           +   + E+F+ M  +G + +   Y I  +    + ++EL+ E+  E
Sbjct: 688 KFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDE 733



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 231/462 (50%), Gaps = 1/462 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           + + LC+  ++ +A +++  M   G IPD  SY+ ++N  C+ G +   ++L+E+M+  G
Sbjct: 259 ITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKG 318

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  TYN ++  LC  G + ++ + L  +I +G+ P+   Y+ L++   K   V +A 
Sbjct: 319 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 378

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L D++  +   P+ ++Y  ++ GLC+ GR  EA + F ++  K  EP+ V+Y  L+   
Sbjct: 379 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C EG+ +EA  L  +M     +P IVTY  L   L   G+ D A ++L EM +     + 
Sbjct: 439 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 498

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +YN ++  LC  G +D  VK +  M      P+  TY  L    C   ++  A  +++ 
Sbjct: 499 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 558

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + +++       +  ++   C  G      +LL  M + G  P++ TY+SLI+  C+   
Sbjct: 559 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 618

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +    EI+  M      PD + +N L+ G CK+R    +  + + M+ KG     ++Y  
Sbjct: 619 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 678

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           L++G   + +   + E+ ++++   +V++  +  +    +++
Sbjct: 679 LIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYD 720



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 208/414 (50%), Gaps = 1/414 (0%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +K A+KV       G+  + +SY  + + LC+ G V  A QL+ +ME  G   + ++Y++
Sbjct: 234 IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYST 293

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           ++ G C +G L + L+ ++ +  KGL PN +TY+ ++    K   V  A ++L ++I++G
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 353

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             P+ V Y  L+ G CK G    A R F ++  +   P+ ++Y  ++  LC  GR  EA+
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEAD 413

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +L  EM      P  VTY  LI      GK   A  + ++M++    P+  +Y  +   L
Sbjct: 414 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 473

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C  G+VD   + L +M  +  + N  TYN L   LC  G + +A  +++ +         
Sbjct: 474 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 533

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  ++ + C+  +  +A +LL +M      P   T++ L+ G CM G++E+  ++   
Sbjct: 534 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 593

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           M E    P+   +N+L+   C       + E+++ M  KG +P+  TY IL++G
Sbjct: 594 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 647



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 208/433 (48%), Gaps = 3/433 (0%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM-LGNLNQSLQF 190
           D   +      L + G +  A +L +KM +YG   +  + N  +  L   L  +  +L+ 
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
                + G+  N  +Y+ +  +  +   V  A +LL  +  +G  P+++SY+ ++ G C+
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +  ++   ++  KG +PN  +YN ++  LC  G+  EA  +L EM     +P  V 
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI      G    A ++ DEM K +  P   +Y  +I  LC  G+V    K   +M 
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +R +P+E TY  L    C  GK++EAF++   +     +     Y  +   LC+ G+  
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +LL+EM + G   + YTY+SL+ GLC  G I++A+++   ME   + PD   +  L+
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
              CKSR    + E+ + M+++   P   T+ +L+ G      LE   ++LK +  + ++
Sbjct: 541 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 600

Query: 550 -SESAVERLVMQY 561
            + +    L+ QY
Sbjct: 601 PNATTYNSLIKQY 613



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 35/297 (11%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +AF    +M+  G  P++V  T L   LCK  ++  A +++  M   G+  +  
Sbjct: 440 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 499

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY----------------------- 171
           +Y  LVN LCK GN+  A++L++ ME  G+  + VTY                       
Sbjct: 500 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 559

Query: 172 ------------NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
                       N L+ G CM G L    + L  +++KG++PNA TY+ L++       +
Sbjct: 560 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 619

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
            A  ++   + AKG  P+  +YN+L+ G CK    +EA    RD+  KGF   V SYN L
Sbjct: 620 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 679

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           ++      ++ EA EL  +M           YNI        GK +  L++ DE ++
Sbjct: 680 IKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 736


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 240/541 (44%), Gaps = 37/541 (6%)

Query: 15  SPEPFRKAYG--FYSQIPNLHSFSLNKGFIRVLAST--QVTISPKDSVYTKPNRKPGNNN 70
           SP P R  +   F S + +   ++L    +R+ A        +P  + Y    R      
Sbjct: 84  SPPPLRPFFDRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRA 143

Query: 71  DTRHRDHKLN---------DAFL------------QLE-------RMVSKGHKPDVVQAT 102
           D RH    L+         DAF             QLE       +M  +G   D V   
Sbjct: 144 DLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYA 203

Query: 103 NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
            L+   C+A ++ +A+++   M      PD  ++  LV  LC  G     + +++KM++ 
Sbjct: 204 ALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKEL 259

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+   T  Y +LV   C      ++ + L+ +   GL+P   T + ++ A  +E  +  A
Sbjct: 260 GWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGA 319

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           +++ + +  KG +PN+ +YN ++ G C  G+  +A+     +   G EP+VV+YN+L+R 
Sbjct: 320 VRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRG 379

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C++G    A  LL  M+G   +    TYN+LI +L   GK D A  + D +     RP+
Sbjct: 380 QCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPN 439

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQ 401
           + ++N +I  LC  GK D+    L+ M      P+  TY+  +  LC     QE    I 
Sbjct: 440 SVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFID 499

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  K        Y  VI  L  +     A ++  +M   G +PD  TY++ +R  C EG
Sbjct: 500 EMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEG 559

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++EA  +   M++     D   +N L+ G     +TD ++ + + M     MPN  T+ 
Sbjct: 560 RLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFF 619

Query: 522 I 522
           I
Sbjct: 620 I 620



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 233/507 (45%), Gaps = 19/507 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ K  +A   L  M   G  P VV  T ++   C+  +M  A++V E M   G  
Sbjct: 273 DLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCE 332

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  +V   C  G V  AM L+++M + G   + VTYN L+RG C+ G++  + + 
Sbjct: 333 PNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRL 392

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   GL  + +TY+ L++A  K   V  A  L D +  +G +PN V++N ++ GLCK
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A  F  ++ S G+ P+  +Y+  + +LC     +E    + EM   D  P+ V 
Sbjct: 453 AGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVN 512

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y I+I  L        A ++  +MV     P   +Y   +   C+EG++D     + +M 
Sbjct: 513 YTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMK 572

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI---------- 419
             R   +   YN L      +G+   A  I++ +     S P  F  +++          
Sbjct: 573 KCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVA-SMPNHFTFFILLRHLLQRRLA 631

Query: 420 -------TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                  TS+ +  +    F+L   M K      + TY S++ G   E  ++E   +  +
Sbjct: 632 EHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSL 691

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M+E +   + D +NAL+   CK R    +  +   MI  G +PN   Y  L+ G+  + +
Sbjct: 692 MKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQ 751

Query: 533 LELSAEVLKELQLRQVVSESAVERLVM 559
            + + E+ +  + ++  ++  V ++++
Sbjct: 752 ADRAKEIFRSSRWKEYNTDEIVWKVII 778



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 216/467 (46%), Gaps = 21/467 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  A   L++M   G +PDVV    L+   C    +  A +++ +M  +G+  D  +Y 
Sbjct: 350 KVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYN 409

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G V  A  L + +E  G   N+VT+N+++ GLC  G  + +  FL+ +I  
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISA 469

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+ +TYS  +E   K +G    +  +D+++ K  KP+ V+Y +++  L  E     A
Sbjct: 470 GYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLA 529

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R +  + S+G  P+VV+Y   +R+ C EGR +EA  ++ EM         + YN LI  
Sbjct: 530 TRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDG 589

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPS---------------AASYNPIIA-RLCSEGKVDL 361
               G+TD A+ +L  M      P+                A + P+ A  +    ++  
Sbjct: 590 HTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELAD 649

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           V +  + M       +  TY  L++L G     ++ E  +++  +  +     ++ Y  +
Sbjct: 650 VFELFELMKKNSVPSSARTY--LSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNAL 707

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           +   C+      A+ LL  M  +GF P+   Y  L+ GL  EG  + A EIF      +Y
Sbjct: 708 VNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEY 767

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
             D   +  ++ G  +    D+  ++  M+ +    P++ TY +L E
Sbjct: 768 NTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 71/141 (50%), Gaps = 1/141 (0%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGF-TPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
           ++ ++T   R   T    +L   M ++    P   TY++LIR LC    +  A     +M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
               ++PD   FN+L+LG C++++ +++ ++F  M  +G   +  +Y  L+EG      +
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215

Query: 534 ELSAEVLKELQLRQVVSESAV 554
           + + E+ +E+    + + +A+
Sbjct: 216 DEALELFREMTQPDMYTHAAL 236



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 108/282 (38%), Gaps = 51/282 (18%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +MVS+G  PDVV  T  +   C   ++ +A  V+  M     I DA +Y  L++     G
Sbjct: 535 QMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIG 594

Query: 148 NVGYAM---------------------------------------------------QLV 156
               A+                                                   +L 
Sbjct: 595 QTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELF 654

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
           E M+    P++  TY S++ G      L++    +  + ++ L  N   Y+ L+    K 
Sbjct: 655 ELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKL 714

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
           R    A  LL  +I  G  PNL+ Y  LL+GL  EG+ + A   FR    K +  + + +
Sbjct: 715 RMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVW 774

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            +++     +G  +  +++++ ++     P+  TY +L   L
Sbjct: 775 KVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 231/514 (44%), Gaps = 39/514 (7%)

Query: 90  VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           +S G  PD   A+ +L+ L K  +   A  + + M+ SG++ D   YT  +   C+  N+
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLC--------------MLGN------------ 183
             A  LV +M+D G   + V YN L+ GLC              ML              
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 184 ---------LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
                    L+ +L+    + + G VP+    SF+L+   K+  V  A +L   +     
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            PN+ +YN LL  +CK G   EA R   ++  KG EPN V+Y IL+ SLC  G  ++A  
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           +L  M       T+  YN LI         D A+  L EMV+    P+AASY+P+IA LC
Sbjct: 394 MLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLC 453

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            +G +   V+   +M  +    N  T+  L    C   K+ EA  +   +  + N  P E
Sbjct: 454 RKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKM-TESNLEPNE 512

Query: 414 F-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             +  VI   C  G   +AFQL  +M   G TPD+YTY SLI GLC+     +A E    
Sbjct: 513 VTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVAD 572

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           +E      +  +  ALL G C+  R   +  V+  M   G   +  ++TI+V     Q +
Sbjct: 573 LENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHD 632

Query: 533 LELSAEVLKELQLRQVVSESAVER-LVMQYDFEG 565
            E S  + +E++ + V  ++     ++  Y  EG
Sbjct: 633 SEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEG 666



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 224/491 (45%), Gaps = 47/491 (9%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA   L+RM  KG +  V    +L+   CK + +  A+  +  MV  G+ P+A+SY+ 
Sbjct: 388 MDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSP 447

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNT------------------------------ 168
           ++  LC+KG++  A++L  KM + G   NT                              
Sbjct: 448 VIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESN 507

Query: 169 -----VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
                VT+N+++ G C++G++ ++ Q  D+++ +GL P+ +TY  L+       G   A 
Sbjct: 508 LEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAK 567

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           + + D+       N  S   LL G C+EGR  EA   + ++   G + +++S+ I++ + 
Sbjct: 568 EFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAA 627

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             +   E++  L  EM      P  V +  +I   +  G    AL   DEM+     P+ 
Sbjct: 628 LKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNT 687

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEA----FA 398
            +Y  ++  LC    +        +M      PN  T+N  L      G ++ A    FA
Sbjct: 688 VTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFA 747

Query: 399 IIQS-LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           ++Q  L N  + +       +I   C+ G+  +A  L+   T+ GF PD  +YS++I  L
Sbjct: 748 MLQGFLANIVSVNT------LIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHEL 801

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C +G I EA+E++  M     KPD+  +N L+        +D  L ++  M++KG  PN 
Sbjct: 802 CKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNW 861

Query: 518 TTYTILVEGIA 528
            T+  L  G +
Sbjct: 862 HTHRALFVGTS 872



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 228/508 (44%), Gaps = 50/508 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ +A      M+++G   D V    L+Y  C+  ++  A+++   M   G +P  +
Sbjct: 244 KNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEA 303

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + +++++ L KKG V  A +L  ++ +     N   YN+L+  +C  G  +++ + ++ +
Sbjct: 304 NCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEM 363

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KGL PN  TY+ L+ +  K   +  A+ +LD +  KG +  +  YN L+   CK+   
Sbjct: 364 SDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDL 423

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+ F  ++   G  PN  SY+ ++  LC +G    A EL  +M     +    T+  L
Sbjct: 424 DMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTAL 483

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       K D A ++ ++M +    P+  ++N +I   C  G +    +  DQM  R  
Sbjct: 484 INGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGL 543

Query: 375 KPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL----CRKG 426
            P+  TY    +GL +  G  K +E  A +++  +  N       K+ +T+L    CR+G
Sbjct: 544 TPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLN-------KFSLTALLHGFCREG 596

Query: 427 KTYQAFQLLYEMTKYG-------FT----------------------------PDSYTYS 451
           +  +A+ +  EM  +G       FT                            PD+  ++
Sbjct: 597 RLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHT 656

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            +I     EG + +AL  +  M    + P+   + AL+  LCKS     +  + + M+  
Sbjct: 657 CMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLAS 716

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEV 539
             +PN  T+   ++  A +  LE + ++
Sbjct: 717 HFLPNSYTFNCFLDYFATEGNLETAKDL 744



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 147/291 (50%), Gaps = 3/291 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L +A+     M   G K D++  T ++Y   K +  +K+  +   M   G+ PD  
Sbjct: 594 REGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNV 653

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +T ++N   K+GN+  A+   ++M   G+  NTVTY +LV  LC   +L+ +      +
Sbjct: 654 FHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEM 713

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +    +PN++T++  L+    E  +  A  L   ++ +G   N+VS N L+ G CK G+ 
Sbjct: 714 LASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML-QGFLANIVSVNTLIKGFCKVGQI 772

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI         GF P+ +SY+ ++  LC +G   EA EL  EM      P IV YNIL
Sbjct: 773 QEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNIL 832

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII--ARLCSEGKVDLVV 363
           I     HG++D  L +  +MVK   +P+  ++  +     L S+G   +++
Sbjct: 833 IRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVGTSLMSKGNTLMLI 883


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 219/456 (48%), Gaps = 10/456 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++  A   L+ M  KG +PD V  T ++  LCK +++ +A  ++  M      P  +
Sbjct: 174 QNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT-----PVGA 228

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +V+ LC +  +     +V++M   G   +TV Y S+V   C    L  +   L R+
Sbjct: 229 SYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARM 288

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G VPN  T++ L++  + +  VH A+ + + ++A+G  P+ +SYNVL+ GLC  G  
Sbjct: 289 VTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDL 348

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+  F  +      P+V +Y+ L+      G  + A  +  +M      P +V Y  +
Sbjct: 349 KRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNM 408

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L      D A  ++D+M      P+  ++N +I  LC  G+    +     M    C
Sbjct: 409 VDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGC 468

Query: 375 KPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            PN+ TYN L  L G+   G  ++A  ++  + N         Y   I+ LC+     +A
Sbjct: 469 PPNDRTYNEL--LHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEA 526

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             LL  M   G  PD++T++++I   C EG +  A  +   M+  +   ++  + +L+ G
Sbjct: 527 MILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSG 586

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           LC   + D ++     M+ +G  PNE T+ +LV GI
Sbjct: 587 LCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 215/458 (46%), Gaps = 39/458 (8%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M   G +P+V     L+  LC+ +++  A ++++ M   G  PD  S+T +++ LCK 
Sbjct: 151 DNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKL 210

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             +  A  ++ +M   G      +YN++V  LC    + +    +D ++ +GL P+   Y
Sbjct: 211 DRLDEARGILAEMTPVG-----ASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAY 265

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++ A  K R +  A  +L  ++ +G  PN+ ++ VL+ G   +G+  +A+  +  + +
Sbjct: 266 TSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVA 325

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G+ P+ +SYN+L+R LC  G  + A  + + M   D  P + TY+ LI   +  G  D 
Sbjct: 326 EGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDV 385

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+ + ++M     +P+   Y  ++  LC +   D     +D+M    C PN  T+N L  
Sbjct: 386 AMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTL-- 443

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
                                           I SLC  G+  +A  + + M +YG  P+
Sbjct: 444 --------------------------------IRSLCDLGRAGRALNVFHGMRRYGCPPN 471

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY+ L+ GL  EG  E+AL +   M  + ++  + ++N  + GLC+ R    ++ +  
Sbjct: 472 DRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLG 531

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            MI +G  P+  T+  ++     +  +  +A +L  + 
Sbjct: 532 RMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMD 569



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 157/345 (45%), Gaps = 39/345 (11%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P    Y+ LL+A  +E  V A + + D++   G +PN+ +YN+L+  LC+  R   A R 
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++  KG  P+ VS+  ++ +LC   R +EA  +LAEM     +P   +YN ++ +L  
Sbjct: 185 LDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGASYNAVVHALCG 239

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             +      V+DEMV    RP   +Y  I+   C   ++ +    L +M    C PN  T
Sbjct: 240 QFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQT 299

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           +  L                           + F+          GK + A  +   M  
Sbjct: 300 FTVLV--------------------------KGFFD--------DGKVHDALGMWNWMVA 325

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G+ P + +Y+ LIRGLC  G ++ AL +F  M + D  PDV  ++ L+ G  K+   D+
Sbjct: 326 EGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDV 385

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           ++ ++  M   G  PN   YT +V+ +  +   + +  ++ ++ L
Sbjct: 386 AMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSL 430



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 11/306 (3%)

Query: 244 LLTGLCKEGRTEEAIR----FFRDLPSKGFE-PNVVSYNILLRSLCMEGRWEEANELLAE 298
           L+  +C   R   A R    F+R     G   P V  YN LL +L  E        +   
Sbjct: 93  LVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDN 152

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P + TYN+LI +L  + +   A ++LDEM +   RP   S+  II+ LC   +
Sbjct: 153 MRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDR 212

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +D     L +M      P   +YN +   LCG  +++E F ++  + ++        Y  
Sbjct: 213 LDEARGILAEM-----TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTS 267

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++ + C+  +   A  +L  M   G  P+  T++ L++G   +G + +AL ++  M    
Sbjct: 268 IVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEG 327

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           + P   ++N L+ GLC       +L VF  M +   +P+  TY+ L++G +   +L+++ 
Sbjct: 328 WAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAM 387

Query: 538 EVLKEL 543
            +  ++
Sbjct: 388 SIWNDM 393



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 120/248 (48%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M + G KP+VV  TN++  LCK     +A  +++ M      P+  ++  L+  LC  G 
Sbjct: 393 MTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
            G A+ +   M  YG P N  TYN L+ GL   GN   +L+ L  ++  G   +  +Y+ 
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNT 512

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            +    + R +  AM LL  +I +G +P+  ++N ++   CKEG    A      + +  
Sbjct: 513 TISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVN 572

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
              N+V+Y  L+  LC + + ++A   L +M      P   T+N+L+  +  H  T   +
Sbjct: 573 CPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPM 632

Query: 329 KVLDEMVK 336
            ++D +++
Sbjct: 633 HLIDHIIE 640



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 84/156 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+    DA   L  M++ G +  +V     +  LC+   +K+A+ ++  M+  GI PDA 
Sbjct: 484 REGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAF 543

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  +++  CK+GNV  A  ++ +M+    P N V Y SL+ GLC    L+ ++ +L ++
Sbjct: 544 TFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKM 603

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           + +G+ PN  T++ L+   +   G    M L+D II
Sbjct: 604 LYEGICPNEATWNVLVRGIFTHLGTIGPMHLIDHII 639


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 248/521 (47%), Gaps = 40/521 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L    +   +MV+ G  PDV     +L  L   + + +  +V  +M+   I P   ++  
Sbjct: 153 LEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNT 212

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++  CK+G VG A+++++ M  +G   N V+YN LV GL   G  +++ + ++++   G
Sbjct: 213 MMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLG 272

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L  +A TY+ L+    K+     A  L  +++ +G  P +V+YN ++  LC+ GR  +A 
Sbjct: 273 LKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDAR 332

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R+   + ++   P++VSYN L+      G + EA  L +E+   +  P++VTYN LI   
Sbjct: 333 RYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGG 392

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  D A  + D+M+K    P   ++  ++   C  G + +  +  D+M  R  KP+ 
Sbjct: 393 CRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDC 452

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF--YKYVITSLCRKGKTYQAFQLL 435
             Y   +     +G   +AF + + +  K    P +   Y  +I  LC+ G    A +L+
Sbjct: 453 IAYTTRIVGELKLGNPSKAFGMKEEM--KAEGFPPDLITYNVLINGLCKLGNFDDANELV 510

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-----------VV------------ 472
            +M   G  PD  TY+S+I    + GL+ +A E+F           VV            
Sbjct: 511 QKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVR 570

Query: 473 ------------MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
                       M++    P+V  +NAL+ GLCK    D++  +F  M  KG  PN+ TY
Sbjct: 571 GRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTY 630

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           TIL+   ++    + + ++ K++  R++  +S     +M++
Sbjct: 631 TILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKH 671



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 195/406 (48%), Gaps = 34/406 (8%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ +G  P VV    ++Y LC+  ++  A + +++MV+  ++PD  SY  L+    + GN
Sbjct: 303 MLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGN 362

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ L  ++       + VTYN+L+ G C  GNL+ +    D +I+ GL P+  T++ 
Sbjct: 363 FAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTI 422

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    +   +  A +L D+++++G KP+ ++Y   + G  K G   +A     ++ ++G
Sbjct: 423 LVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEG 482

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
           F P++++YN+L+  LC  G +++ANEL+ +M      P  VTY  +I +    G    A 
Sbjct: 483 FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
           +V  +M+K    PS  +Y  +I      G++D   K  D+M  +   PN  TYN L    
Sbjct: 543 EVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNAL---- 598

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                                         I  LC++     A+ L  EM   G +P+ Y
Sbjct: 599 ------------------------------IYGLCKENMMDVAYNLFAEMESKGVSPNKY 628

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           TY+ LI         ++AL+++  M + + KPD    +AL+  L K
Sbjct: 629 TYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK 674



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 181/380 (47%), Gaps = 34/380 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA   L+ MV++   PD+V    L+Y   +     +A+ +   + S  ++P   +Y 
Sbjct: 327 RVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYN 386

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C+ GN+  A  + + M  +G   + VT+  LVRG C +GNL  + +  D ++ +
Sbjct: 387 TLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSR 446

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+   Y+  +    K      A  + +++ A+G  P+L++YNVL+ GLCK G  ++A
Sbjct: 447 GLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDA 506

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + +  +G  P+ V+Y  ++ +  + G   +A E+ ++M      P++VTY +LI S
Sbjct: 507 NELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHS 566

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            A  G+ D A K  DEM      P+  +YN +I  LC E  +D+      +M  +   PN
Sbjct: 567 YAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPN 626

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
           + TY  L                      +NS+ Q +                A +L  +
Sbjct: 627 KYTYTILI--------------------NENSNLQYW--------------QDALKLYKD 652

Query: 438 MTKYGFTPDSYTYSSLIRGL 457
           M      PDS T+S+L++ L
Sbjct: 653 MLDREIKPDSCTHSALMKHL 672



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 149/276 (53%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G  PDVV  T L+   C+   +  A ++ + M+S G+ PD  +YT  +    K GN
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGN 467

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A  + E+M+  G+P + +TYN L+ GLC LGN + + + + ++  +G+VP+  TY+ 
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS 527

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++ A      +  A ++  D++ KG  P++V+Y VL+      GR + A ++F ++  KG
Sbjct: 528 IIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG 587

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PNV++YN L+  LC E   + A  L AEM+    SP   TY ILI   +       AL
Sbjct: 588 VSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDAL 647

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           K+  +M+    +P + +++ ++  L  + K+  V++
Sbjct: 648 KLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLR 683



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 197/449 (43%), Gaps = 42/449 (9%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+    KK  +   + +  KM + G   +    N +++ L     +N+  +    +I+  
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQ 202

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P   T++ ++++  KE  V  A+++LD +   G  PN VSYNVL+ GL  +G  + A 
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                +   G + +  +YN L+R  C +  +EEAN+L  EM G    PT+VTYN ++ SL
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPII---ARL---------------------- 353
              G+   A + LD MV     P   SYN +I   +RL                      
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382

Query: 354 ----------CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV---QEAFAI 399
                     C  G +D+     D M      P+  T+  L    C +G +   +E F  
Sbjct: 383 VTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDE 442

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           + S G K +      Y   I    + G   +AF +  EM   GF PD  TY+ LI GLC 
Sbjct: 443 MLSRGLKPDCIA---YTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCK 499

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G  ++A E+   M      PD   + +++     S     + EVF  M++KG  P+  T
Sbjct: 500 LGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVT 559

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQV 548
           YT+L+   A +  L+ + +   E+Q + V
Sbjct: 560 YTVLIHSYAVRGRLDFAKKYFDEMQDKGV 588



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 124/235 (52%), Gaps = 2/235 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M+S+G KPD +  T  +    K     KA  + E M + G  PD  +Y  L+N LCK
Sbjct: 440 FDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCK 499

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN   A +LV+KM   G   + VTY S++    + G L ++ +    +++KG+ P+  T
Sbjct: 500 LGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVT 559

Query: 206 YSFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           Y+ L+ + Y  RG +  A K  D++  KG  PN+++YN L+ GLCKE   + A   F ++
Sbjct: 560 YTVLIHS-YAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEM 618

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            SKG  PN  +Y IL+        W++A +L  +M   +  P   T++ L+  L+
Sbjct: 619 ESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLS 673



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 170/364 (46%), Gaps = 11/364 (3%)

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG-GKPNLVSY---NV 243
           +  LD L + G +  A+   +++E A +   V     +LD ++  G G+ + VS    ++
Sbjct: 89  VAILDILAKNGFMKPAY---WVMEKAIE---VKVDGGVLDVLVGIGCGRNSEVSVKLLDL 142

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+    K+   E+ +  F  + + G  P+V + N +L+ L  +    E  E+ + M    
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQ 202

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             PTIVT+N ++ S    G+   A++VLD M      P+  SYN ++  L  +G+ D   
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           + ++QM     K +  TYN L    C     +EA  + + +  +        Y  ++ SL
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           CR G+   A + L  M      PD  +Y++LI G    G   EAL +F  +   +  P V
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N L+ G C++   D++  +   MI+ G  P+  T+TILV G      L ++ E+  E
Sbjct: 383 VTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDE 442

Query: 543 LQLR 546
           +  R
Sbjct: 443 MLSR 446



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 101/194 (52%), Gaps = 1/194 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            +DA   +++M  +G  PD V  T++++    +  ++KA +V   M+  GI P   +YT 
Sbjct: 503 FDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTV 562

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++    +G + +A +  ++M+D G   N +TYN+L+ GLC    ++ +      +  KG
Sbjct: 563 LIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKG 622

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + PN +TY+ L+      +    A+KL  D++ +  KP+  +++ L+  L K+ +    +
Sbjct: 623 VSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVL 682

Query: 259 RFFRDLPSKGFEPN 272
           R   +LP    E N
Sbjct: 683 R-LENLPLAIVEIN 695


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 226/468 (48%), Gaps = 2/468 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYT 137
           +++A    + M S    P V   T LL  + +      AI +++ + SS GI  D  +  
Sbjct: 57  IDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLN 116

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++NCLC+   V +   ++  M   G     +T  +L+ GLC+ GN+ Q++  +D + + 
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKM 176

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               + +TY  L+    K     AA++ L  +  +  KPN+V Y+ ++ GLCK+G   EA
Sbjct: 177 RYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    ++  KG  PN+V+Y  L++ LC  GRW+E   LL EM        + T NIL+ +
Sbjct: 237 LNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDA 296

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK   A  V+  M+     P   +YN +I   C + K++  ++    M  R C P+
Sbjct: 297 FCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPD 356

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              +  L    C    + +   +++ +           +  +I   C+ G+   A +L  
Sbjct: 357 IVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFL 416

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M KYG  P+  T + ++ GLC   L+ EA+ +   ME+ +   ++  ++ LL G+C + 
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAG 476

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + + + E+F  +  KG   N  TYTI+++G+  Q  L+ + ++L  ++
Sbjct: 477 KLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINME 524



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 131/257 (50%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G  PDV    +L++  C  NKM +A++V  +MVS G +PD   +T L++  CK  N
Sbjct: 313 MILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKN 372

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +   M L+E+M   G+  + VT+ +L+ G C  G    + +    + + G VPN  T + 
Sbjct: 373 INKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAV 432

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L+   K   +  A+ L + +       N+V Y++LL G+C  G+   A   F  LP KG
Sbjct: 433 ILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + NV +Y I+++ LC +G  ++A +LL  M+     P   TYN+ +  L    +   ++
Sbjct: 493 LQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSI 552

Query: 329 KVLDEMVKGRFRPSAAS 345
           K L  M    F   AA+
Sbjct: 553 KYLTIMRDKGFSVDAAT 569



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 150/312 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +++A      M  KG +P++V    L+  LC   + K+   +++ M+  G+ 
Sbjct: 225 DGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMR 284

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +   LV+  CK+G V  A  ++  M   G   +  TYNSL+   C+   +N++++ 
Sbjct: 285 LDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ +G +P+   ++ L+    K++ ++  M LL+++   G  P++V++  L+ G C+
Sbjct: 345 FHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQ 404

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR   A   F ++   G  PN+ +  ++L  LC      EA  L   M+  +    IV 
Sbjct: 405 AGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVI 464

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+IL+  +   GK + A ++   +     + +  +Y  +I  LC +G +D     L  M 
Sbjct: 465 YSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINME 524

Query: 371 HRRCKPNEGTYN 382
              C P+  TYN
Sbjct: 525 ENGCLPDNCTYN 536



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 150/317 (47%), Gaps = 6/317 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           L+ M+  G + D+ Q  N+L D  CK  K+ +A  V+  M+ +G  PD  +Y  L++  C
Sbjct: 275 LDEMIKMGMRLDL-QTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYC 333

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
            +  +  AM++   M   G   + V + SL+ G C   N+N+ +  L+ + + G VP+  
Sbjct: 334 LQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVV 393

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T++ L+    +     AA +L  ++   G  PNL +  V+L GLCK     EA+     +
Sbjct: 394 TWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAM 453

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
                + N+V Y+ILL  +C  G+   A EL + + G      + TY I+I  L   G  
Sbjct: 454 EKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSL 513

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL----DQMFHRRCKPNEGT 380
           D A  +L  M +    P   +YN  +  L ++ ++   +K L    D+ F       E T
Sbjct: 514 DKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEIT 573

Query: 381 YNGLAMLCGVGKVQEAF 397
            N L+   G  +++E F
Sbjct: 574 INYLSTNEGDTRIREFF 590



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 121/242 (50%), Gaps = 4/242 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +K+N+A      MVS+G  PD+V  T+L++  CK   + K + ++E M   G +PD  ++
Sbjct: 336 NKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTW 395

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+   C+ G    A +L   M  YG   N  T   ++ GLC    L++++   + + +
Sbjct: 396 TTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEK 455

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             L  N   YS LL+       ++AA +L   +  KG + N+ +Y +++ GLCK+G  ++
Sbjct: 456 SNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDK 515

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGG---DRSPTIVTYN 312
           A     ++   G  P+  +YN+ ++ L  +     + + L  M D G   D + T +T N
Sbjct: 516 AEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITIN 575

Query: 313 IL 314
            L
Sbjct: 576 YL 577


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 218/451 (48%), Gaps = 2/451 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           P V   T LL  + +      AI +++ M SS GI  D  +   ++NCLC+   V +   
Sbjct: 74  PSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFS 133

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           ++  M   G     +T  +L+ GLC+ GN+ Q++   D + +     + +TY  L+    
Sbjct: 134 VLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLC 193

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K     AA+  L  +  +  KPN+V Y+ ++ GLCK+G   EA+    ++  KG  PN+V
Sbjct: 194 KTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLV 253

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y  L++ LC  GRW+EA  LL EM      P +   NIL+ +    GK   A  V+  M
Sbjct: 254 TYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFM 313

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
           +     P   +YN +I   C + K++  ++    M  R   P+   +  L    C    +
Sbjct: 314 ILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNI 373

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            +A  +++ +           +  +I   C+ G+   A +L   M KYG  P+  T + +
Sbjct: 374 NKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVI 433

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + GLC E L+ EA+ +   ME+ +   ++  ++ LL G+C + + + + E+F  +  KG 
Sbjct: 434 LDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGL 493

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             N   YTI+++G+  Q  L+ + ++L  ++
Sbjct: 494 QINVYIYTIMIKGLCKQGSLDKAEDLLINME 524



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 222/476 (46%), Gaps = 9/476 (1%)

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVG 150
           S G + D +    ++  LC+   +     V+  M   G+ P   + T L+N LC +GNV 
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVA 164

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
            A+ L + ME   YP +  TY  L+ GLC  G+   ++ +L ++ ++   PN   YS ++
Sbjct: 165 QAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIM 224

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           +   K+  V  A+ L  ++  KG +PNLV+Y  L+ GLC  GR +EA     ++   G  
Sbjct: 225 DGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMR 284

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P++   NIL+ + C EG+  +A  ++  M      P + TYN LI       K + A++V
Sbjct: 285 PDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 331 LDEMV-KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLC 388
              MV +GR  P    +  +I   C +  ++  +  L++M      P+  T+  L    C
Sbjct: 345 FHLMVSRGRL-PDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFC 403

Query: 389 GVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             G+    +E F  +   G   N    +    ++  LC++    +A  L   M K     
Sbjct: 404 QAGRPLAAKELFLNMHKYGQVPN---LQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDL 460

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +   YS L+ G+C  G +  A E+F  +     + +V  +  ++ GLCK    D + ++ 
Sbjct: 461 NIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLL 520

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
             M E G +PN  TY + V+G+  + E+  S + L  ++ +    ++A    ++ Y
Sbjct: 521 INMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINY 576



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 205/433 (47%), Gaps = 3/433 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            F  L  M   G +P V+  T L+  LC    + +A+ + + M       D  +Y  L+N
Sbjct: 131 GFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLIN 190

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G+   A+  + KME+  +  N V Y++++ GLC  G ++++L     +  KG+ P
Sbjct: 191 GLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRP 250

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L++          A  LLD+++  G +P+L   N+L+   CKEG+  +A    
Sbjct: 251 NLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVI 310

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G  P+V +YN L+   C++ +  EA  +   M    R P IV +  LI      
Sbjct: 311 GFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKD 370

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-PNEGT 380
              + A+ +L+EM K  F P  A++  +I   C  G+  L  K L    H+  + PN  T
Sbjct: 371 KNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGR-PLAAKELFLNMHKYGQVPNLQT 429

Query: 381 YNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
               L  LC    + EA ++ +++           Y  ++  +C  GK   A++L   + 
Sbjct: 430 CAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLP 489

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G   + Y Y+ +I+GLC +G +++A ++ + MEE    P+   +N  + GL   +   
Sbjct: 490 GKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIA 549

Query: 500 LSLEVFQMMIEKG 512
            S++   +M +KG
Sbjct: 550 RSIKYLTIMRDKG 562



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 133/265 (50%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G  PDV    +L++  C  NKM +A++V  +MVS G +PD   +T L++  CK  N
Sbjct: 313 MILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKN 372

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  AM L+E+M   G+  +  T+ +L+ G C  G    + +    + + G VPN  T + 
Sbjct: 373 INKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAV 432

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L+   KE  +  A+ L   +       N+V Y++LL G+C  G+   A   F  LP KG
Sbjct: 433 ILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + NV  Y I+++ LC +G  ++A +LL  M+     P   TYN+ +  L    +   ++
Sbjct: 493 LQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSI 552

Query: 329 KVLDEMVKGRFRPSAASYNPIIARL 353
           K L  M    F   AA+   II  L
Sbjct: 553 KYLTIMRDKGFSVDAATTEFIINYL 577



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 165/348 (47%), Gaps = 4/348 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +++A      M  KG +P++V    L+  LC   + K+A  +++ M+  G+ 
Sbjct: 225 DGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMR 284

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD      LV+  CK+G V  A  ++  M   G   +  TYNSL+   C+   +N++++ 
Sbjct: 285 PDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++ +G +P+   ++ L+    K++ ++ AM LL+++   G  P++ ++  L+ G C+
Sbjct: 345 FHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQ 404

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR   A   F ++   G  PN+ +  ++L  LC E    EA  L   M+  +    IV 
Sbjct: 405 AGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVI 464

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+IL+  +   GK + A ++   +     + +   Y  +I  LC +G +D     L  M 
Sbjct: 465 YSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINME 524

Query: 371 HRRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
              C PN  TYN    GL     + +  +   I++  G   +++  EF
Sbjct: 525 ENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEF 572



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 35/242 (14%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +K+N+A      MVS+G  PD+V  T+L++  CK   + KA+ ++E M   G +PD +++
Sbjct: 336 NKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATW 395

Query: 137 TYLVNCLCKKGN-----------------------------------VGYAMQLVEKMED 161
           T L+   C+ G                                    +  A+ L + ME 
Sbjct: 396 TTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEK 455

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
                N V Y+ L+ G+C  G LN + +    L  KGL  N + Y+ +++   K+  +  
Sbjct: 456 SNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDK 515

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A  LL ++   G  PN  +YNV + GL  +     +I++   +  KGF  +  +   ++ 
Sbjct: 516 AEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIIN 575

Query: 282 SL 283
            L
Sbjct: 576 YL 577


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 223/475 (46%), Gaps = 25/475 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M++ G   + +  ++    LC A K +KA  V+  M+  G IPD S+Y+ ++N LC    
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A  L E+M+  G   +  TY  +V   C  G + Q+ ++ + + + G  PN  TY+ 
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF------R 262
           L+ A  K + V  A +L + ++++G  PN+V+Y+ L+ G CK G+ E+A + F      +
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618

Query: 263 DLPS-----KGFE-----PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           D+P      K ++     PNVV+Y  LL   C   R EEA +LL  M      P  + Y+
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  L   GK D A +V  EM +  F  +  +Y+ +I R     + DL  K L +M   
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C PN   Y  +   LC VGK  EA+ ++Q +  K        Y  +I      GK    
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL  M   G  P+  TY  LI   C  G ++ A  +   M++  +      +  ++ G
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858

Query: 492 LCKSRRTDLSLEVFQMMIEKGQ---MPNETTYTILVEGIAHQDELELSAEVLKEL 543
             K       +E   ++ E GQ    P  + Y +L++ +     LE++  +L+E+
Sbjct: 859 FNKE-----FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 235/495 (47%), Gaps = 25/495 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   AF  +  M+ +G  PD    + +L  LC A+KM+ A  + E M   G++ D  +YT
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V+  CK G +  A +   +M + G   N VTY +L+        ++ + +  + ++ +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK----------------GGKPNLVSY 241
           G +PN  TYS L++   K   V  A ++ + +                     +PN+V+Y
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             LL G CK  R EEA +    +  +G EPN + Y+ L+  LC  G+ +EA E+  EM  
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
                T+ TY+ LI       + D A KVL +M++    P+   Y  +I  LC  GK D 
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
             K +  M  + C+PN  TY   AM+ G   +GK++    +++ +G+K  +     Y+ +
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYT--AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I   C+ G    A  LL EM +  +   +  Y  +I G   E +  E+L +   + + D 
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDT 878

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMM--IEKGQMPNETTYTILVEGIAHQDELELS 536
            P +  +  L+  L K++R +++L + + +       +   +TY  L+E +   +++E +
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938

Query: 537 AEVLKELQLRQVVSE 551
            ++  E+  + V+ E
Sbjct: 939 FQLFSEMTKKGVIPE 953



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 228/503 (45%), Gaps = 31/503 (6%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM +    P+VV  + LL       ++ +  +V+ MM+  G  P    +  LV+  C 
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM-LGNLNQSLQFL-----DRLIQKGL 199
            G+  YA +L++KM   G+    V YN L+  +C    +LN  L  L       ++  G+
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           V N    S              A  ++ ++I +G  P+  +Y+ +L  LC   + E A  
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F ++   G   +V +Y I++ S C  G  E+A +   EM     +P +VTY  LI +  
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC----- 374
              K  +A ++ + M+     P+  +Y+ +I   C  G+V+       Q+F R C     
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC----QIFERMCGSKDV 620

Query: 375 ---------------KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
                          +PN  TY  L    C   +V+EA  ++ ++  +     Q  Y  +
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I  LC+ GK  +A ++  EM+++GF    YTYSSLI         + A ++   M E   
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P+V  +  ++ GLCK  +TD + ++ QMM EKG  PN  TYT +++G     ++E   E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800

Query: 539 VLKELQLRQVVSESAVERLVMQY 561
           +L+ +  + V       R+++ +
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDH 823



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 193/401 (48%), Gaps = 21/401 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY--------- 136
            E M+S+G  P++V  + L+   CKA +++KA ++ E M  S  +PD   Y         
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635

Query: 137 -----TY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
                TY  L++  CK   V  A +L++ M   G   N + Y++L+ GLC +G L+++ +
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
               + + G     +TYS L++  +K +    A K+L  ++     PN+V Y  ++ GLC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G+T+EA +  + +  KG +PNVV+Y  ++    M G+ E   ELL  M     +P  V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY +LI     +G  D A  +L+EM +  +    A Y  +I     E    L +  LD++
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL--LDEI 873

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS--SPQEFYKYVITSLCRKG 426
                 P    Y  L   L    +++ A  +++ +     +       Y  +I SLC   
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
           K   AFQL  EMTK G  P+  ++ SLI+GL     I EAL
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 232/496 (46%), Gaps = 31/496 (6%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLC------KANKMKKAIKVMEMMVSSGIIPDASS 135
           A+  L++MV  GH P  V    L+  +C        + +  A K    M+++G++ +  +
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            +    CLC  G    A  ++ +M   G+  +T TY+ ++  LC    +  +    + + 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + GLV + +TY+ ++++  K   +  A K  +++   G  PN+V+Y  L+    K  +  
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A   F  + S+G  PN+V+Y+ L+   C  G+ E+A ++   M G    P +       
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV------- 623

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                    D   K  D+  +   RP+  +Y  ++   C   +V+   K LD M    C+
Sbjct: 624 ---------DMYFKQYDDNSE---RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAF 432
           PN+  Y+ L   LC VGK+ EA  +   +   ++  P   Y Y  +I    +  +   A 
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMS--EHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++L +M +    P+   Y+ +I GLC  G  +EA ++  +MEE   +P+V  + A++ G 
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
               + +  LE+ + M  KG  PN  TY +L++       L+++  +L+E++     + +
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 553 AVERLVMQ-YDFEGIE 567
           A  R V++ ++ E IE
Sbjct: 850 AGYRKVIEGFNKEFIE 865



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 204/440 (46%), Gaps = 30/440 (6%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-----LDR 193
           LV   C+ G+   A++ + +++D+ +  +  TYN L++       L+ +        L  
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L   G     F YS      ++E     A+ L++    +   P+ V Y  L++GLC+   
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWRE-----ALTLVE---TENFVPDTVFYTKLISGLCEASL 317

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME----GRWEEANELLAEMDGGDRSPTIV 309
            EEA+ F   + +    PNVV+Y+ LL   C+     GR +    ++  M+G   SP I 
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMM-MEGCYPSPKI- 374

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK------VDLVV 363
            +N L+ +    G   +A K+L +MVK    P    YN +I  +C +        +DL  
Sbjct: 375 -FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           K   +M       N+   +     LC  GK ++AF++I+ +  +        Y  V+  L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C   K   AF L  EM + G   D YTY+ ++   C  GLIE+A + F  M E    P+V
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             + AL+    K+++   + E+F+ M+ +G +PN  TY+ L++G     ++E + ++ + 
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613

Query: 543 LQLRQVVSESAVERLVMQYD 562
           +   + V +  V+    QYD
Sbjct: 614 MCGSKDVPD--VDMYFKQYD 631



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 217/495 (43%), Gaps = 32/495 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   + A  +L R+     +P       L+    KA+++  A  +   M  + +  D  
Sbjct: 212 RNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGF 271

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +       LCK G    A+ LVE      +  +TV Y  L+ GLC      +++ FL+R+
Sbjct: 272 TLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 328

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TYS LL     ++ +    ++L+ ++ +G  P+   +N L+   C  G  
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 388

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR------WEEANELLAEMDGGDRSPTI 308
             A +  + +   G  P  V YNIL+ S+C +         + A +  +EM         
Sbjct: 389 SYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNK 448

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           +  +     L   GK + A  V+ EM+   F P  ++Y+ ++  LC+  K++L     ++
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           M       +  TY  +    C  G +++A   F  ++ +G   N      Y  +I +  +
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT---YTALIHAYLK 565

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM----------- 473
             K   A +L   M   G  P+  TYS+LI G C  G +E+A +IF  M           
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625

Query: 474 --EEYD---YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
             ++YD    +P+V  + ALL G CKS R + + ++   M  +G  PN+  Y  L++G+ 
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685

Query: 529 HQDELELSAEVLKEL 543
              +L+ + EV  E+
Sbjct: 686 KVGKLDEAQEVKTEM 700



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 158/351 (45%), Gaps = 40/351 (11%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           +P+VV    LL   CK++++++A K+++ M   G  P+   Y  L++ LCK G +  A +
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 155 LVEKMEDYGYPT-----------------------------------NTVTYNSLVRGLC 179
           +  +M ++G+P                                    N V Y  ++ GLC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
            +G  +++ + +  + +KG  PN  TY+ +++       +   ++LL+ + +KG  PN V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +Y VL+   CK G  + A     ++    +  +   Y  ++     E  + E+  LL E+
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEI 873

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV--KGRFRPSAASYNPIIARLCSEG 357
              D +P +  Y +LI +L    + + AL++L+E+          +++YN +I  LC   
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           KV+   +   +M  +   P   ++  L   L    K+ EA  ++  + + +
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHME 984



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 158/388 (40%), Gaps = 30/388 (7%)

Query: 183 NLNQSLQFL-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL--- 238
           +L +   FL D L+  G V        + +++   R +  A+  +DD+  +  +  L   
Sbjct: 67  DLTKEYSFLHDSLVDYGNVNVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQF 126

Query: 239 ---VSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANE 294
              +S ++++  L    R    I FF     + G++     YN L+  +  +   +   E
Sbjct: 127 REKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEE 186

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
            L ++   D+       N+L+     +G    AL+ L  +   RFRPS ++YN +I    
Sbjct: 187 FLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFL 246

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM------LCGVGKVQEAFAIIQSLGNKQN 408
              ++D        + HR         +G  +      LC VGK +EA  ++++    +N
Sbjct: 247 KADRLDSA-----SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET----EN 297

Query: 409 SSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             P   FY  +I+ LC      +A   L  M      P+  TYS+L+ G   +  +    
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +  +M      P    FN+L+   C S     + ++ + M++ G MP    Y IL+  I
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 528 A------HQDELELSAEVLKELQLRQVV 549
                  + D L+L+ +   E+    VV
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVV 445


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 232/482 (48%), Gaps = 32/482 (6%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           ++L + F     ++ +G+ P++V    L+  LC  +++ +A ++   M   G  PD  +Y
Sbjct: 118 NRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTY 177

Query: 137 TYLVNCLCKKGNVGYAMQLVEKM------EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
             L+  LC  GN+  A++L ++M       +     N +TYN +V GLC +G  +++ Q 
Sbjct: 178 GTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQL 237

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +  +G++PN                         +++ +G +P++V++NVL+  LCK
Sbjct: 238 FEEMKTQGMIPN-------------------------EMLDQGLQPDMVTFNVLIDTLCK 272

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG+  EA +    +   G  P++V+YN L+   CM G    A EL   M      P +++
Sbjct: 273 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS 332

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN+LI   +   K + A+K+ +EM+    RP+  +Y+ ++  +   GKVD   K    M 
Sbjct: 333 YNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 392

Query: 371 HRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                 N  TY   L  LC    + EA  +   L +       E    +I  LC+ GK  
Sbjct: 393 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 452

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A++L  +++  G  P+  TY+ +I G C EG +++A  +   ME     PD+  +N L+
Sbjct: 453 TAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLM 512

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            G  +S + +  +++   M +K   P+  T +I+V+ ++  ++ +    +L    +++ V
Sbjct: 513 RGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 572

Query: 550 SE 551
            +
Sbjct: 573 DK 574



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 237/493 (48%), Gaps = 27/493 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+     P +    +LL  L K     +   +   M  SG+  D  +   L+NCLC    
Sbjct: 60  MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +         +   GY  N VTYN+L++GLCM   ++++ +   R+ + G  P+  TY  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 209 LLEAAYKERGVHAAMKL----LDDI--IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           L++       ++ A+KL    L+DI       KPN+++YN+++ GLCK GR +EA + F 
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 263 DLPSKG----------FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           ++ ++G           +P++V++N+L+ +LC EG+  EA +LL  M      P +VTYN
Sbjct: 240 EMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 299

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI      G  + A ++   M      P   SYN +I       KV+  +K  ++M   
Sbjct: 300 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 359

Query: 373 RCKPNEGTYNGLAMLCGV---GKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
             +PN  TY+ L  L G+   GKV +A   F+++++ G  +NS     Y   +  LC+  
Sbjct: 360 GKRPNVITYDSL--LKGIFLAGKVDDAKKLFSVMKAHGIAENSYT---YGIFLDGLCKND 414

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
             ++A +L  E+    F  +    + LI GLC  G +E A E+F  +    ++P+V  + 
Sbjct: 415 CLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 474

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ G C+  + D +  + Q M   G  P+  TY  L+ G    ++LE   ++L  +  +
Sbjct: 475 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK 534

Query: 547 QVVSESAVERLVM 559
            V  ++    +V+
Sbjct: 535 DVSPDAITCSIVV 547



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 223/451 (49%), Gaps = 29/451 (6%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A+    +M+ S   P  SS+ +L++ L K  +      L  +M   G  ++  T N L+ 
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            LC +  L +       ++++G  PN  TY+ L++    E  +  A +L   +   G  P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK------GFEPNVVSYNILLRSLCMEGRWE 290
           ++V+Y  L+ GLC  G    A++  +++ +         +PNV++YNI++  LC  GR +
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 291 EANELLAEM-----------DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           EA +L  EM           D G   P +VT+N+LI +L   GK   A K+L  M++   
Sbjct: 233 EAKQLFEEMKTQGMIPNEMLDQG-LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 291

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEA 396
            P   +YN +I   C  G ++   +    M  + C+P+  +YN   ++ G  K   V+EA
Sbjct: 292 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN--VLINGYSKTLKVEEA 349

Query: 397 FAIIQSL---GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
             +   +   G + N      Y  ++  +   GK   A +L   M  +G   +SYTY   
Sbjct: 350 MKLYNEMLLVGKRPNVIT---YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 406

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + GLC    + EA+++F  ++  ++K +++N N L+ GLCK+ + + + E+F+ +  +G 
Sbjct: 407 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 466

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            PN  TYTI++ G   + +++ +  ++++++
Sbjct: 467 EPNVVTYTIMIHGFCREGQVDKANVLIQKME 497



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 201/422 (47%), Gaps = 50/422 (11%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS------GI 129
           +H++++A     RM   G  PDVV    L+  LC    +  A+K+ + M++         
Sbjct: 152 EHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINC 211

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKME----------DYGYPTNTVTYNSLVRGLC 179
            P+  +Y  +V+ LCK G    A QL E+M+          D G   + VT+N L+  LC
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLC 271

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
             G + ++ + L  +I+ G+VP+  TY+ L+E       +++A +L   + +KG +P+++
Sbjct: 272 KEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVI 331

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           SYNVL+ G  K  + EEA++ + ++   G  PNV++Y+ LL+ + + G+ ++A +L + M
Sbjct: 332 SYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 391

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                +    TY I +  L  +     A+K+  E+    F+    + N +I  LC  GK+
Sbjct: 392 KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKL 451

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
           +   +  +++ +   +PN  TY                                    +I
Sbjct: 452 ETAWELFEKLSNEGHEPNVVTYT----------------------------------IMI 477

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              CR+G+  +A  L+ +M   G TPD  TY++L+RG      +EE +++   M + D  
Sbjct: 478 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 537

Query: 480 PD 481
           PD
Sbjct: 538 PD 539



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 147/288 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++ K+ +A   L  M+  G  PD+V   +L+   C    +  A ++   M S G  
Sbjct: 268 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 327

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SY  L+N   K   V  AM+L  +M   G   N +TY+SL++G+ + G ++ + + 
Sbjct: 328 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 387

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   G+  N++TY   L+   K   +  AMKL  ++ +   K  + + N L+ GLCK
Sbjct: 388 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 447

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E A   F  L ++G EPNVV+Y I++   C EG+ ++AN L+ +M+    +P I+T
Sbjct: 448 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 507

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           YN L+       K +  +++L  M +    P A + + ++  L  + K
Sbjct: 508 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 555



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 28/281 (9%)

Query: 304 RSPTIVTYNILIGSLAYHGKT-----DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
            S  I + N  I     H KT      HAL     M++    PS +S+N +++ L     
Sbjct: 25  HSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKH 84

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
              V    +QM       +  T N L   LC V +++E FA    +  +  S     Y  
Sbjct: 85  YSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNT 144

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM---- 473
           +I  LC + +  +A +L   M K G TPD  TY +LI+GLC  G I  AL++   M    
Sbjct: 145 LIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDI 204

Query: 474 --EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE----------TTYT 521
              E + KP+V  +N ++ GLCK  R D + ++F+ M  +G +PNE           T+ 
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFN 264

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           +L++ +  +       +V++  +L  V+ ES +   ++ Y+
Sbjct: 265 VLIDTLCKE------GKVIEAKKLLGVMIESGIVPDLVTYN 299



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 97/198 (48%), Gaps = 1/198 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++DA      M + G   +       L  LCK + + +A+K+   + SS    +  +  
Sbjct: 380 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 439

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G +  A +L EK+ + G+  N VTY  ++ G C  G ++++   + ++   
Sbjct: 440 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 499

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  TY+ L+   Y+   +   ++LL  +  K   P+ ++ ++++  L K+ + +E 
Sbjct: 500 GCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQEC 559

Query: 258 IRFFRDLP-SKGFEPNVV 274
           +      P  KG + +++
Sbjct: 560 LHLLPRFPIQKGVDKHLL 577


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 225/440 (51%), Gaps = 7/440 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M+  G + D      L+  LC  N++    +++++M S G+ P+A  Y  L++ LCK 
Sbjct: 167 KQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKN 226

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G VG A  L++++E+     N VT+N L+   C   NL Q+L  L++    G VP+  T 
Sbjct: 227 GKVGRARSLMDEIEE----PNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTM 282

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++E       V  A+++L+ +  KGG  ++V+YN LL G C+ G+ + A RF +++  
Sbjct: 283 TKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMER 342

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG  PNV +YNIL+   C  G ++ A ++  +M     S    TY+ LI  L + G+ + 
Sbjct: 343 KGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEE 402

Query: 327 ALKVLDEM--VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
            LK+L+ M   KG      + YN ++  L  +   D  ++ L +M     +  + +   L
Sbjct: 403 GLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDRSLRIL 462

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G V+ A  +   + N+  +     Y  ++   C++G   +AF+L+ EM  +G+ 
Sbjct: 463 G-FCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYF 521

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
             +  +++LI G C +G  E AL++   M      PD   ++ L+  LC+      +L +
Sbjct: 522 LVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSI 581

Query: 505 FQMMIEKGQMPNETTYTILV 524
           F  MIEKG  P+ +T+  L+
Sbjct: 582 FNQMIEKGITPDSSTWNSLL 601



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 201/436 (46%), Gaps = 36/436 (8%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM--------------- 121
           +++ D F  L+ M S+G KP+ V    LL+ LCK  K+ +A  +M               
Sbjct: 192 NRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEEPNDVTFNVLI 251

Query: 122 ----------------EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYP 165
                           E   S G +PD  + T +V  LC  G V  A++++E++E  G  
Sbjct: 252 AAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGL 311

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            + V YN+L+RG C LG +  + +FL  + +KG +PN  TY+ L+           A+ +
Sbjct: 312 VDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDM 371

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP-SKGFEPNVVS-YNILLRSL 283
            +D+   G   N  +Y+ L+ GL   GR EE ++    +  SKG     +S YN +L  L
Sbjct: 372 FNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGL 431

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             +  W+EA E L +M+     P  V  ++ I      G   +A  V D+M+     P+ 
Sbjct: 432 YKKNMWDEALEFLMKME--KLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNI 489

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
             Y+ ++   C EG +    + +++M           +N L    CG GK + A  ++  
Sbjct: 490 LVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDD 549

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  +     +  Y  +I +LCRKG   +A  +  +M + G TPDS T++SL+  L  E +
Sbjct: 550 MVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKEII 609

Query: 463 IEEALEIFVVMEEYDY 478
             E   +F V ++ ++
Sbjct: 610 WLENKNVFHVNKQLEW 625


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 231/491 (47%), Gaps = 6/491 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM-MVSSGIIPDASSY 136
           KL +A   +  M ++G  P   Q  N + D+     + +  + M + M   G+ PD  S+
Sbjct: 169 KLKEAVNMVVEMQNQGLVPST-QTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +V   C  G V  A + +  M + G+  +  T   ++   C  G +N+ + +  ++++
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            GL PN   ++ L+    K+  +  A +LL++++ +G KPN+ ++  L+ GLCK+G TE+
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 257 AIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           A R F  L  S G++PNV +Y  ++   C E +   A  LL+ M      P   TY  LI
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G    A +++D M K  F P+  +YN II  LC +G +D   + L+++     +
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467

Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            +  TY  L ++ C       +      +     +     Y  +I++ CR+ +  ++ +L
Sbjct: 468 ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERL 527

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             E    G  P   TY+S+I G C  G    A+++F  M  +   PD   + AL+ GLCK
Sbjct: 528 FEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK 587

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             + D +  ++  M++KG  P E T   L      +D+   +  VL  L+ RQ +    V
Sbjct: 588 ESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWI--RTV 645

Query: 555 ERLVMQYDFEG 565
             LV +   EG
Sbjct: 646 NTLVRKLCSEG 656



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 226/462 (48%), Gaps = 3/462 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           ++ +  +  K+K+A+ ++  M + G++P   +   +++     G V  A  +  +M   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              + V++  +V   C +G + ++ ++L+ ++++G + +  T + +++A  ++  V+  +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                ++  G  PN++++  L+ GLCK+G  ++A     ++  +G++PNV ++  L+  L
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 284 CMEGRWEEANELLAEMDGGD-RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           C +G  E+A  L  ++   D   P + TY  +I       K + A  +L  M +    P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
             +Y  +I   C  G      + +D M      PN  TYN +   LC  G + EA+ ++ 
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +      +    Y  +++  CR+  T ++     +M K GFTPD ++Y++LI   C + 
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++E+  +F         P    + +++ G C+   T L++++FQ M   G  P+  TY 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            L+ G+  + +L+  A  L +  + + +S   V RL + Y++
Sbjct: 580 ALISGLCKESKLD-DARNLYDAMMDKGLSPCEVTRLTLAYEY 620



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 203/421 (48%), Gaps = 19/421 (4%)

Query: 81  DAFLQ----------LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DAF Q            +MV  G  P+V+  T L+  LCK   +K+A +++E MV  G  
Sbjct: 267 DAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           P+  ++T L++ LCKKG    A +L  K+    GY  N  TY +++ G C    LN++  
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEM 386

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L R+ ++GLVPN  TY+ L++   K      A +L+D +  +G  PN+ +YN ++ GLC
Sbjct: 387 LLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K+G  +EA R    +   G + + V+Y IL+   C +     +     +M     +P I 
Sbjct: 447 KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIH 506

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +Y  LI +     +   + ++ +E V     P+  +Y  +I   C  G   L VK   +M
Sbjct: 507 SYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566

Query: 370 FHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT-SLCRKGK 427
            +  C P+  TY  L + LC   K+ +A  +  ++ +K   SP E  +  +    C+K  
Sbjct: 567 SNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK-GLSPCEVTRLTLAYEYCKKDD 625

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
           +  A  +L  + K  +     T ++L+R LC EG ++ A   F   +  D +P+V+    
Sbjct: 626 SSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMAALFF--HKLLDKEPNVNRVTL 680

Query: 488 L 488
           L
Sbjct: 681 L 681



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 157/314 (50%), Gaps = 3/314 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KLN A + L RM  +G  P+    T L+   CK     +A ++M++M   G  P+  
Sbjct: 377 KEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIY 436

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ LCKKG++  A +L+ K+  +G   + VTY  L+   C   + N+SL F +++
Sbjct: 437 TYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM 496

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  +Y+ L+    +++ +  + +L ++ ++ G  P   +Y  ++ G C+ G T
Sbjct: 497 LKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNT 556

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A++ F+ + + G  P+ ++Y  L+  LC E + ++A  L   M     SP  VT   L
Sbjct: 557 SLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                    +  A+ VLD + K   R    + N ++ +LCSEGK+D+      ++  +  
Sbjct: 617 AYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEP 673

Query: 375 KPNEGTYNGLAMLC 388
             N  T  G    C
Sbjct: 674 NVNRVTLLGFMNKC 687



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 58/128 (45%)

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +GNK      E  + ++ +    GK  +A  ++ EM   G  P + T + ++      GL
Sbjct: 145 IGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGL 204

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +E A  +FV M +    PD  +F  +++  C   R   +      M+E+G + +  T T+
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTL 264

Query: 523 LVEGIAHQ 530
           +++    +
Sbjct: 265 IIDAFCQK 272


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 223/475 (46%), Gaps = 25/475 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M++ G   + +  ++    LC A K +KA  V+  M+  G IPD S+Y+ ++N LC    
Sbjct: 398 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 457

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A  L E+M+  G   +  TY  +V   C  G + Q+ ++ + + + G  PN  TY+ 
Sbjct: 458 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 517

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF------R 262
           L+ A  K + V  A +L + ++++G  PN+V+Y+ L+ G CK G+ E+A + F      +
Sbjct: 518 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 577

Query: 263 DLPS-----KGFE-----PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           D+P      K ++     PNVV+Y  LL   C   R EEA +LL  M      P  + Y+
Sbjct: 578 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 637

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  L   GK D A +V  EM +  F  +  +Y+ +I R     + DL  K L +M   
Sbjct: 638 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 697

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C PN   Y  +   LC VGK  EA+ ++Q +  K        Y  +I      GK    
Sbjct: 698 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 757

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL  M   G  P+  TY  LI   C  G ++ A  +   M++  +      +  ++ G
Sbjct: 758 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 817

Query: 492 LCKSRRTDLSLEVFQMMIEKGQ---MPNETTYTILVEGIAHQDELELSAEVLKEL 543
             K       +E   ++ E GQ    P  + Y +L++ +     LE++  +L+E+
Sbjct: 818 FNKE-----FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 867



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 235/495 (47%), Gaps = 25/495 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   AF  +  M+ +G  PD    + +L  LC A+KM+ A  + E M   G++ D  +YT
Sbjct: 422 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 481

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V+  CK G +  A +   +M + G   N VTY +L+        ++ + +  + ++ +
Sbjct: 482 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 541

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK----------------GGKPNLVSY 241
           G +PN  TYS L++   K   V  A ++ + +                     +PN+V+Y
Sbjct: 542 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 601

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             LL G CK  R EEA +    +  +G EPN + Y+ L+  LC  G+ +EA E+  EM  
Sbjct: 602 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 661

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
                T+ TY+ LI       + D A KVL +M++    P+   Y  +I  LC  GK D 
Sbjct: 662 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 721

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
             K +  M  + C+PN  TY   AM+ G   +GK++    +++ +G+K  +     Y+ +
Sbjct: 722 AYKLMQMMEEKGCQPNVVTYT--AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 779

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I   C+ G    A  LL EM +  +   +  Y  +I G   E +  E+L +   + + D 
Sbjct: 780 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDT 837

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMM--IEKGQMPNETTYTILVEGIAHQDELELS 536
            P +  +  L+  L K++R +++L + + +       +   +TY  L+E +   +++E +
Sbjct: 838 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 897

Query: 537 AEVLKELQLRQVVSE 551
            ++  E+  + V+ E
Sbjct: 898 FQLFSEMTKKGVIPE 912



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 230/506 (45%), Gaps = 37/506 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM +    P+VV  + LL       ++ +  +V+ MM+  G  P    +  LV+  C 
Sbjct: 284 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 343

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF--LD-------RLIQ 196
            G+  YA +L++KM   G+    V YN L+  +C  G+   SL F  LD        ++ 
Sbjct: 344 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GD-KDSLNFDLLDLAEKAYSEMLA 400

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+V N    S              A  ++ ++I +G  P+  +Y+ +L  LC   + E 
Sbjct: 401 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 460

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F ++   G   +V +Y I++ S C  G  E+A +   EM     +P +VTY  LI 
Sbjct: 461 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 520

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC-- 374
           +     K  +A ++ + M+     P+  +Y+ +I   C  G+V+       Q+F R C  
Sbjct: 521 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC----QIFERMCGS 576

Query: 375 ------------------KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
                             +PN  TY  L    C   +V+EA  ++ ++  +     Q  Y
Sbjct: 577 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 636

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I  LC+ GK  +A ++  EM+++GF    YTYSSLI         + A ++   M E
Sbjct: 637 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 696

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P+V  +  ++ GLCK  +TD + ++ QMM EKG  PN  TYT +++G     ++E 
Sbjct: 697 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 756

Query: 536 SAEVLKELQLRQVVSESAVERLVMQY 561
             E+L+ +  + V       R+++ +
Sbjct: 757 CLELLERMGSKGVAPNYVTYRVLIDH 782



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 193/401 (48%), Gaps = 21/401 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY--------- 136
            E M+S+G  P++V  + L+   CKA +++KA ++ E M  S  +PD   Y         
Sbjct: 535 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 594

Query: 137 -----TY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
                TY  L++  CK   V  A +L++ M   G   N + Y++L+ GLC +G L+++ +
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
               + + G     +TYS L++  +K +    A K+L  ++     PN+V Y  ++ GLC
Sbjct: 655 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 714

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G+T+EA +  + +  KG +PNVV+Y  ++    M G+ E   ELL  M     +P  V
Sbjct: 715 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 774

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY +LI     +G  D A  +L+EM +  +    A Y  +I     E    L +  LD++
Sbjct: 775 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL--LDEI 832

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS--SPQEFYKYVITSLCRKG 426
                 P    Y  L   L    +++ A  +++ +     +       Y  +I SLC   
Sbjct: 833 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 892

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
           K   AFQL  EMTK G  P+  ++ SLI+GL     I EAL
Sbjct: 893 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 232/496 (46%), Gaps = 31/496 (6%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLC------KANKMKKAIKVMEMMVSSGIIPDASS 135
           A+  L++MV  GH P  V    L+  +C        + +  A K    M+++G++ +  +
Sbjct: 350 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKIN 409

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            +    CLC  G    A  ++ +M   G+  +T TY+ ++  LC    +  +    + + 
Sbjct: 410 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 469

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + GLV + +TY+ ++++  K   +  A K  +++   G  PN+V+Y  L+    K  +  
Sbjct: 470 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 529

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A   F  + S+G  PN+V+Y+ L+   C  G+ E+A ++   M G    P +       
Sbjct: 530 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV------- 582

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                    D   K  D+  +   RP+  +Y  ++   C   +V+   K LD M    C+
Sbjct: 583 ---------DMYFKQYDDNSE---RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 630

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAF 432
           PN+  Y+ L   LC VGK+ EA  +   +   ++  P   Y Y  +I    +  +   A 
Sbjct: 631 PNQIVYDALIDGLCKVGKLDEAQEVKTEMS--EHGFPATLYTYSSLIDRYFKVKRQDLAS 688

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++L +M +    P+   Y+ +I GLC  G  +EA ++  +MEE   +P+V  + A++ G 
Sbjct: 689 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
               + +  LE+ + M  KG  PN  TY +L++       L+++  +L+E++     + +
Sbjct: 749 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 808

Query: 553 AVERLVMQ-YDFEGIE 567
           A  R V++ ++ E IE
Sbjct: 809 AGYRKVIEGFNKEFIE 824



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 204/440 (46%), Gaps = 30/440 (6%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-----LDR 193
           LV   C+ G+   A++ + +++D+ +  +  TYN L++       L+ +        L  
Sbjct: 165 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 224

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L   G     F YS      ++E     A+ L++    +   P+ V Y  L++GLC+   
Sbjct: 225 LRMDGFTLRCFAYSLCKVGKWRE-----ALTLVE---TENFVPDTVFYTKLISGLCEASL 276

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME----GRWEEANELLAEMDGGDRSPTIV 309
            EEA+ F   + +    PNVV+Y+ LL   C+     GR +    ++  M+G   SP I 
Sbjct: 277 FEEAMDFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMM-MEGCYPSPKI- 333

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK------VDLVV 363
            +N L+ +    G   +A K+L +MVK    P    YN +I  +C +        +DL  
Sbjct: 334 -FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAE 392

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           K   +M       N+   +     LC  GK ++AF++I+ +  +        Y  V+  L
Sbjct: 393 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 452

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C   K   AF L  EM + G   D YTY+ ++   C  GLIE+A + F  M E    P+V
Sbjct: 453 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 512

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             + AL+    K+++   + E+F+ M+ +G +PN  TY+ L++G     ++E + ++ + 
Sbjct: 513 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 572

Query: 543 LQLRQVVSESAVERLVMQYD 562
           +   + V +  V+    QYD
Sbjct: 573 MCGSKDVPD--VDMYFKQYD 590



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 217/495 (43%), Gaps = 32/495 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   + A  +L R+     +P       L+    KA+++  A  +   M  + +  D  
Sbjct: 171 RNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGF 230

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +       LCK G    A+ LVE      +  +TV Y  L+ GLC      +++ FL+R+
Sbjct: 231 TLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 287

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TYS LL     ++ +    ++L+ ++ +G  P+   +N L+   C  G  
Sbjct: 288 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 347

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR------WEEANELLAEMDGGDRSPTI 308
             A +  + +   G  P  V YNIL+ S+C +         + A +  +EM         
Sbjct: 348 SYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNK 407

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           +  +     L   GK + A  V+ EM+   F P  ++Y+ ++  LC+  K++L     ++
Sbjct: 408 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 467

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           M       +  TY  +    C  G +++A   F  ++ +G   N      Y  +I +  +
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT---YTALIHAYLK 524

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM----------- 473
             K   A +L   M   G  P+  TYS+LI G C  G +E+A +IF  M           
Sbjct: 525 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 584

Query: 474 --EEYD---YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
             ++YD    +P+V  + ALL G CKS R + + ++   M  +G  PN+  Y  L++G+ 
Sbjct: 585 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 644

Query: 529 HQDELELSAEVLKEL 543
              +L+ + EV  E+
Sbjct: 645 KVGKLDEAQEVKTEM 659



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 157/388 (40%), Gaps = 30/388 (7%)

Query: 183 NLNQSLQFL-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL--- 238
           +L +   FL D L+  G V        + +++   R +  A+  +DD+  +  +  L   
Sbjct: 26  DLTKEYSFLHDSLVDYGNVNVHQVVPIITQSSIDARAIADAVTGVDDVFGRKSQKFLRQF 85

Query: 239 ---VSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANE 294
              +S ++++  L    R    I FF     + G++     YN L+  +  +   +   E
Sbjct: 86  REKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEE 145

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
            L ++   D+       N+L+     +G    AL+ L  +   RFRPS ++YN +I    
Sbjct: 146 FLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFL 205

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM------LCGVGKVQEAFAIIQSLGNKQN 408
              ++D        + HR         +G  +      LC VGK +EA  ++++    +N
Sbjct: 206 KADRLDSA-----SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET----EN 256

Query: 409 SSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             P   FY  +I+ LC      +A   L  M      P+  TYS+L+ G   +  +    
Sbjct: 257 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 316

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +  +M      P    FN+L+   C S     + ++ + M++ G MP    Y IL+  I
Sbjct: 317 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 376

Query: 528 AHQ------DELELSAEVLKELQLRQVV 549
                    D L+L+ +   E+    VV
Sbjct: 377 CGDKDSLNFDLLDLAEKAYSEMLAAGVV 404


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 223/475 (46%), Gaps = 25/475 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M++ G   + +  ++    LC A K +KA  V+  M+  G IPD S+Y+ ++N LC    
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A  L E+M+  G   +  TY  +V   C  G + Q+ ++ + + + G  PN  TY+ 
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF------R 262
           L+ A  K + V  A +L + ++++G  PN+V+Y+ L+ G CK G+ E+A + F      +
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618

Query: 263 DLPS-----KGFE-----PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           D+P      K ++     PNVV+Y  LL   C   R EEA +LL  M      P  + Y+
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  L   GK D A +V  EM +  F  +  +Y+ +I R     + DL  K L +M   
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C PN   Y  +   LC VGK  EA+ ++Q +  K        Y  +I      GK    
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL  M   G  P+  TY  LI   C  G ++ A  +   M++  +      +  ++ G
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858

Query: 492 LCKSRRTDLSLEVFQMMIEKGQ---MPNETTYTILVEGIAHQDELELSAEVLKEL 543
             K       +E   ++ E GQ    P  + Y +L++ +     LE++  +L+E+
Sbjct: 859 FNKE-----FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 235/495 (47%), Gaps = 25/495 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   AF  +  M+ +G  PD    + +L  LC A+KM+ A  + E M   G++ D  +YT
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V+  CK G +  A +   +M + G   N VTY +L+        ++ + +  + ++ +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK----------------GGKPNLVSY 241
           G +PN  TYS L++   K   V  A ++ + +                     +PN+V+Y
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             LL G CK  R EEA +    +  +G EPN + Y+ L+  LC  G+ +EA E+  EM  
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
                T+ TY+ LI       + D A KVL +M++    P+   Y  +I  LC  GK D 
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
             K +  M  + C+PN  TY   AM+ G   +GK++    +++ +G+K  +     Y+ +
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYT--AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I   C+ G    A  LL EM +  +   +  Y  +I G   E +  E+L +   + + D 
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDT 878

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMM--IEKGQMPNETTYTILVEGIAHQDELELS 536
            P +  +  L+  L K++R +++L + + +       +   +TY  L+E +   +++E +
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938

Query: 537 AEVLKELQLRQVVSE 551
            ++  E+  + V+ E
Sbjct: 939 FQLFSEMTKKGVIPE 953



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 228/503 (45%), Gaps = 31/503 (6%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM +    P+VV  + LL       ++ +  +V+ MM+  G  P    +  LV+  C 
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM-LGNLNQSLQFL-----DRLIQKGL 199
            G+  YA +L++KM   G+    V YN L+  +C    +LN  L  L       ++  G+
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           V N    S              A  ++ ++I +G  P+  +Y+ +L  LC   + E A  
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F ++   G   +V +Y I++ S C  G  E+A +   EM     +P +VTY  LI +  
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC----- 374
              K  +A ++ + M+     P+  +Y+ +I   C  G+V+       Q+F R C     
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC----QIFERMCGSKDV 620

Query: 375 ---------------KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
                          +PN  TY  L    C   +V+EA  ++ ++  +     Q  Y  +
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I  LC+ GK  +A ++  EM+++GF    YTYSSLI         + A ++   M E   
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P+V  +  ++ GLCK  +TD + ++ QMM EKG  PN  TYT +++G     ++E   E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800

Query: 539 VLKELQLRQVVSESAVERLVMQY 561
           +L+ +  + V       R+++ +
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDH 823



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 193/401 (48%), Gaps = 21/401 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY--------- 136
            E M+S+G  P++V  + L+   CKA +++KA ++ E M  S  +PD   Y         
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635

Query: 137 -----TY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
                TY  L++  CK   V  A +L++ M   G   N + Y++L+ GLC +G L+++ +
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
               + + G     +TYS L++  +K +    A K+L  ++     PN+V Y  ++ GLC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G+T+EA +  + +  KG +PNVV+Y  ++    M G+ E   ELL  M     +P  V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY +LI     +G  D A  +L+EM +  +    A Y  +I     E    L +  LD++
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL--LDEI 873

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS--SPQEFYKYVITSLCRKG 426
                 P    Y  L   L    +++ A  +++ +     +       Y  +I SLC   
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
           K   AFQL  EMTK G  P+  ++ SLI+GL     I EAL
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 232/496 (46%), Gaps = 31/496 (6%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLC------KANKMKKAIKVMEMMVSSGIIPDASS 135
           A+  L++MV  GH P  V    L+  +C        + +  A K    M+++G++ +  +
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            +    CLC  G    A  ++ +M   G+  +T TY+ ++  LC    +  +    + + 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + GLV + +TY+ ++++  K   +  A K  +++   G  PN+V+Y  L+    K  +  
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A   F  + S+G  PN+V+Y+ L+   C  G+ E+A ++   M G    P +       
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV------- 623

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                    D   K  D+  +   RP+  +Y  ++   C   +V+   K LD M    C+
Sbjct: 624 ---------DMYFKQYDDNSE---RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAF 432
           PN+  Y+ L   LC VGK+ EA  +   +   ++  P   Y Y  +I    +  +   A 
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMS--EHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++L +M +    P+   Y+ +I GLC  G  +EA ++  +MEE   +P+V  + A++ G 
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
               + +  LE+ + M  KG  PN  TY +L++       L+++  +L+E++     + +
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 553 AVERLVMQ-YDFEGIE 567
           A  R V++ ++ E IE
Sbjct: 850 AGYRKVIEGFNKEFIE 865



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 204/440 (46%), Gaps = 30/440 (6%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-----LDR 193
           LV   C+ G+   A++ + +++D+ +  +  TYN L++       L+ +        L  
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L   G     F YS      ++E     A+ L++    +   P+ V Y  L++GLC+   
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWRE-----ALTLVE---TENFVPDTVFYTKLISGLCEASL 317

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME----GRWEEANELLAEMDGGDRSPTIV 309
            EEA+ F   + +    PNVV+Y+ LL   C+     GR +    ++  M+G   SP I 
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMM-MEGCYPSPKI- 374

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK------VDLVV 363
            +N L+ +    G   +A K+L +MVK    P    YN +I  +C +        +DL  
Sbjct: 375 -FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           K   +M       N+   +     LC  GK ++AF++I+ +  +        Y  V+  L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C   K   AF L  EM + G   D YTY+ ++   C  GLIE+A + F  M E    P+V
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             + AL+    K+++   + E+F+ M+ +G +PN  TY+ L++G     ++E + ++ + 
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613

Query: 543 LQLRQVVSESAVERLVMQYD 562
           +   + V +  V+    QYD
Sbjct: 614 MCGSKDVPD--VDMYFKQYD 631



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 217/495 (43%), Gaps = 32/495 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+   + A  +L R+     +P       L+    KA+++  A  +   M  + +  D  
Sbjct: 212 RNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGF 271

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +       LCK G    A+ LVE      +  +TV Y  L+ GLC      +++ FL+R+
Sbjct: 272 TLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 328

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TYS LL     ++ +    ++L+ ++ +G  P+   +N L+   C  G  
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 388

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR------WEEANELLAEMDGGDRSPTI 308
             A +  + +   G  P  V YNIL+ S+C +         + A +  +EM         
Sbjct: 389 SYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNK 448

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           +  +     L   GK + A  V+ EM+   F P  ++Y+ ++  LC+  K++L     ++
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           M       +  TY  +    C  G +++A   F  ++ +G   N      Y  +I +  +
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT---YTALIHAYLK 565

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM----------- 473
             K   A +L   M   G  P+  TYS+LI G C  G +E+A +IF  M           
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625

Query: 474 --EEYD---YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
             ++YD    +P+V  + ALL G CKS R + + ++   M  +G  PN+  Y  L++G+ 
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685

Query: 529 HQDELELSAEVLKEL 543
              +L+ + EV  E+
Sbjct: 686 KVGKLDEAQEVKTEM 700



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 158/388 (40%), Gaps = 30/388 (7%)

Query: 183 NLNQSLQFL-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL--- 238
           +L +   FL D L+  G V        + +++   R +  A+  +DD+  +  +  L   
Sbjct: 67  DLTKEYSFLHDSLVDYGNVNVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQF 126

Query: 239 ---VSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANE 294
              +S ++++  L    R    I FF     + G++     YN L+  +  +   +   E
Sbjct: 127 REKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEE 186

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
            L ++   D+       N+L+     +G    AL+ L  +   RFRPS ++YN +I    
Sbjct: 187 FLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFL 246

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM------LCGVGKVQEAFAIIQSLGNKQN 408
              ++D        + HR         +G  +      LC VGK +EA  ++++    +N
Sbjct: 247 KADRLDSA-----SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET----EN 297

Query: 409 SSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             P   FY  +I+ LC      +A   L  M      P+  TYS+L+ G   +  +    
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +  +M      P    FN+L+   C S     + ++ + M++ G MP    Y IL+  I
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417

Query: 528 A------HQDELELSAEVLKELQLRQVV 549
                  + D L+L+ +   E+    VV
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVV 445


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 224/475 (47%), Gaps = 39/475 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R++ +    L  + M   G  P+V     L+  LC+ N++  A K+++ M   G  
Sbjct: 136 DALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCP 195

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  +V+ LCK   +  A +++  M     P    +YN++V  LC    + +    
Sbjct: 196 PDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSV 250

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +  ++ +GL PN  TY+ +++A  K   +  A  +L  ++  G  PN+V++  L+ GL  
Sbjct: 251 VSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFD 310

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +GR  +A+  +R + ++G+ P+ VSYNIL+R LC  G  + A+ +L  M+     P + T
Sbjct: 311 DGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRT 370

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI   +  G    A+ + ++M +   +P+   Y  ++   C +   +     +D+M 
Sbjct: 371 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 430

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              C PN  T+N L                                  I SLC   +  +
Sbjct: 431 LENCPPNTVTFNTL----------------------------------IRSLCDCRRVGR 456

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  + +EM ++G  P+  TY+ LI GL  EG   +AL +   M+ +  +  +  +N ++ 
Sbjct: 457 ALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVS 516

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           GLC++R +  ++     MI +G  PN  T++ ++     + E+ ++A +L  + +
Sbjct: 517 GLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNV 571



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 207/454 (45%), Gaps = 6/454 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +++++  A   L+ M  KG  PD V    ++  LCK +++ +A +V+  M      P A+
Sbjct: 175 QNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAA 229

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +V  LC++  +     +V  M   G   N +TY ++V   C  G L  +   L R+
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 289

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  PN  T++ L+   + +  VH A+ +   ++A+G  P+ VSYN+L+ GLC  G  
Sbjct: 290 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 349

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A      +   G  PNV +Y+ L+      G    A  +  +M      P +V Y  +
Sbjct: 350 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNM 409

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +         + A  ++D+M+     P+  ++N +I  LC   +V   +    +M    C
Sbjct: 410 VDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC 469

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN L   L   G   +A  ++  + +         Y  V++ LC+   + +A  
Sbjct: 470 VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMV 529

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            + +M   G  P+++T+S++I   C EG +  A  +   M   +   ++  +  L+  LC
Sbjct: 530 FVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELC 589

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
              +   ++     M+ +G  PN  T+ +LV G+
Sbjct: 590 NQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 6/235 (2%)

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI +L         + V D M K    P+  +YN ++  LC   +V    K LD+M 
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            + C P++ TY  + ++LC + ++ EA  ++ ++     S     Y  ++ +LCR+ +  
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAAS-----YNAIVLALCREFRMQ 245

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           + F ++ +M   G  P+  TY++++   C  G +  A  I   M      P+V  F AL+
Sbjct: 246 EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALV 305

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            GL    R   +L++++ M+ +G  P+  +Y IL+ G+    +L+ ++ +L  ++
Sbjct: 306 RGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSME 360



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 71/144 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+    DA   +  M S G +  +V    ++  LC+    ++A+  +  M+  GI P+A 
Sbjct: 485 REGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAF 544

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +++ +++  CK+G V  A  ++  M       N + Y  L+  LC    L  ++ +L ++
Sbjct: 545 TFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKM 604

Query: 195 IQKGLVPNAFTYSFLLEAAYKERG 218
           + +G+ PN  T++ L+   ++  G
Sbjct: 605 LYEGIYPNTVTWNVLVRGVFRNLG 628


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 228/460 (49%), Gaps = 1/460 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +MV KG  PD     +L+Y      + K+A++V + M S GI+PD  +   L+  LCK
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A  + + M   G  T+  +Y  ++ G    G L    +  + ++  G+ P++  
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L++A  K   +  A  + +++  +G +P++V+Y+ ++  LC+ G+ ++A+  F  + 
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G  P++ +Y+ L++  C  G   +A +L+ +M      P I  +N +I +L   G+  
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  + D  +     P+   YN ++   C  GK++  ++  D M     +PN   Y  L 
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C VG++ E  ++ + + +K        Y  ++  L + G+T  A    +EMT+ G  
Sbjct: 574 NGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIA 633

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            D YTYS ++ GL      +EA+ +F  +   + K D+   N ++ G+ + RR + + ++
Sbjct: 634 MDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDL 693

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F  +   G +P+  TY+I++  +  +  +E + ++   ++
Sbjct: 694 FASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 237/498 (47%), Gaps = 6/498 (1%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGII 130
           TR    KL  AF    +++  G   D +  +NLL  LC+A +  +A+ ++   M   G +
Sbjct: 119 TRAHRPKLTLAFFG--QVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCV 176

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSL 188
           PD  SY  ++  LC     G A +L+  M + G     N V YN+++ G    G++N++ 
Sbjct: 177 PDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKAC 236

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
              + ++Q+G+ P+  TY+ ++ A  K R +  A  +L  ++ KG  P+  +YN L+ G 
Sbjct: 237 DLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGY 296

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
              G+ +EA+R  + + S+G  P+VV+ N L+ SLC  G+ ++A ++   M    +   I
Sbjct: 297 SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDI 356

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            +Y I++   A  G      ++ + M+     P +  +N +I      G +D      ++
Sbjct: 357 FSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNE 416

Query: 369 MFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M  +  +P+  TY+  +A LC +GK+ +A      + ++  +     Y ++I   C  G 
Sbjct: 417 MREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGD 476

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A  L+ +M   G  PD   ++ +I  LC  G + +A  IF         P+V  +N 
Sbjct: 477 LLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNT 536

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+ G C   + + +L VF +M+  G  PN   Y  LV G      ++    + +E+  + 
Sbjct: 537 LMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG 596

Query: 548 VVSESAVERLVMQYDFEG 565
           +   + +  +++   F+ 
Sbjct: 597 IKPSTTLYNIILHGLFQA 614



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 226/475 (47%), Gaps = 18/475 (3%)

Query: 85  QLERMVSKGHK---PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +L RM+++G     P+ V    ++    K   + KA  +   MV  GI PD S+Y  +VN
Sbjct: 200 ELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVN 259

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK   +  A  ++ +M D G   +  TYNSL+ G    G   ++++   ++  +G++P
Sbjct: 260 ALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILP 319

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  T + L+ +  K   +  A  + D +  KG K ++ SY ++L G   +G   +    F
Sbjct: 320 DVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELF 379

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             + S G  P+   +N+L+++    G  + A  +  EM      P +VTY+ +I +L   
Sbjct: 380 NLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRI 439

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQMFHRRCKPN 377
           GK D A++  ++M+     PS ++Y+ +I   C+ G +    DLV+    QM ++  +P+
Sbjct: 440 GKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVL----QMMNKGMRPD 495

Query: 378 EGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            G +N +   LC +G+V +A   F    S+G   N      Y  ++   C  GK   A +
Sbjct: 496 IGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVM---VYNTLMDGYCLVGKMENALR 552

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M   G  P+   Y +L+ G C  G I+E L +F  +     KP    +N +L GL 
Sbjct: 553 VFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLF 612

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           ++ RT  +   F  M E G   +  TY+I++ G+      + +  + KEL    V
Sbjct: 613 QAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNV 667



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 212/486 (43%), Gaps = 57/486 (11%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME------------------------ 122
           ++M S+G  PDVV   +L+  LCK  K+K A  V +                        
Sbjct: 310 KKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATK 369

Query: 123 -----------MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
                      +M+S GI PD+  +  L+    K G +  A  +  +M + G   + VTY
Sbjct: 370 GCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTY 429

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           ++++  LC +G ++ +++  +++I +G+ P+  TY FL++       +  A  L+  ++ 
Sbjct: 430 STVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMN 489

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KG +P++  +N ++  LCK GR  +A   F    S G  PNV+ YN L+   C+ G+ E 
Sbjct: 490 KGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMEN 549

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  +   M      P +V Y  L+      G+ D  L +  E++    +PS   YN I+ 
Sbjct: 550 ALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILH 609

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM--------LCGVGK---VQEAFAII 400
            L   G+              + K +E T +G+AM        L G+ K     EA  + 
Sbjct: 610 GLFQAGRT----------VPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLF 659

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + L              +I  + +  +  +A  L   +++ G  P   TYS ++  L  E
Sbjct: 660 KELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKE 719

Query: 461 GLIEEALEIFVVMEEYDY-KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           GL+EEA ++F  ME     +P+    N ++  L + R    +      + E+    + +T
Sbjct: 720 GLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHST 779

Query: 520 YTILVE 525
            T+L++
Sbjct: 780 TTLLID 785



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 192/416 (46%), Gaps = 40/416 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
           P   +Y  L++C  +       +    ++   G   +T+  ++L+RGLC      ++L  
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK---PNLVSYNVLLT 246
            L R+   G VP+ F+Y  +L++   +R    A +LL  ++A+GG    PN V+YN ++ 
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELL-RMMAEGGAVCLPNAVAYNTVID 224

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           G  KEG   +A   F ++  +G  P++ +YN ++ +LC     ++A  +L +M      P
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLP 284

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
              TYN LI   +  G+   A++V  +M      P   + N ++A LC  GK+       
Sbjct: 285 DNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKI------- 337

Query: 367 DQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
                   K     ++ +AM    G+  + F+                YK ++     KG
Sbjct: 338 --------KDARDVFDSMAM---KGQKTDIFS----------------YKIMLNGYATKG 370

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
                 +L   M   G  PDS+ ++ LI+     G+++ A  IF  M E   +PDV  ++
Sbjct: 371 CLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYS 430

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA-HQDELELSAEVLK 541
            ++  LC+  + D ++E F  MI++G  P+ +TY  L++G   H D L+    VL+
Sbjct: 431 TVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQ 486



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 182/389 (46%), Gaps = 7/389 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A +    M  +G +PDVV  + ++  LC+  KM  A++    M+  G+ P  S+Y +
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C  G++  A  LV +M + G   +   +N ++  LC LG +  +    D  I  G
Sbjct: 467 LIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIG 526

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L PN   Y+ L++       +  A+++ D +++ G +PN+V Y  L+ G CK GR +E +
Sbjct: 527 LHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGL 586

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  KG +P+   YNI+L  L   GR   A     EM     +    TY+I++G L
Sbjct: 587 SLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGL 646

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +  +D A+ +  E+     +    + N +IA +    +V+        +      P+ 
Sbjct: 647 FKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSV 706

Query: 379 GTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSP-QEFYKYVITSLCRKGKTYQAFQLLY 436
            TY+  +  L   G V+EA  +  S+ N     P  +   +V+  L  K +  +A   L 
Sbjct: 707 VTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLS 766

Query: 437 EMTKYGFTPDSYTYSSLI-----RGLCME 460
           ++ +  F+ D  T + LI     +G C E
Sbjct: 767 KIDERSFSLDHSTTTLLIDLFSSKGTCRE 795


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 230/497 (46%), Gaps = 36/497 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M+ +   PDV     L+  LC     +K+  +M+ M  SG  P   +Y  +++  CK
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG    A++L++ M+  G   +  TYN L+  LC    + +    L  + ++ + PN  T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+     E  V  A +LL+++++ G  PN V++N L+ G   EG  +EA++ F  + 
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +KG  P+ VSY +LL  LC    ++ A      M         +TY  +I  L  +G  D
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+ +L+EM K    P   +Y+ +I   C  G+     + + +++     PN   Y+ L 
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT---------------- 428
              C +G ++EA  I +++  + ++     +  ++TSLC+ GK                 
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580

Query: 429 -------------------YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                               +AF +  EMTK G  P  +TY SL++GLC  G + EA + 
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              +       D   +N LL  +CKS     ++ +F  M+++  +P+  TYT L+ G+  
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700

Query: 530 QDELELSAEVLKELQLR 546
           + +  ++    KE + R
Sbjct: 701 KGKTVIAILFAKEAEAR 717



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 212/480 (44%), Gaps = 2/480 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D    +    +A      M +KG  P  V    LL  LCK  +   A      M  +G+ 
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 440

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
               +YT +++ LCK G +  A+ L+ +M   G   + VTY++L+ G C +G    + + 
Sbjct: 441 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + R+ + GL PN   YS L+    +   +  A+++ + +I +G   +  ++NVL+T LCK
Sbjct: 501 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 560

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA  F R + S G  PN VS++ L+      G   +A  +  EM      PT  T
Sbjct: 561 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 620

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+  L   G    A K L  +           YN ++  +C  G +   V    +M 
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKT 428
            R   P+  TY  L + LC  GK   A    +    + N  P +  Y   +  + + G+ 
Sbjct: 681 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 740

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
                   +M   G TPD  T +++I G    G IE+  ++   M   +  P++  +N L
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           L G  K +    S  +++ +I  G +P++ T   LV GI   + LE+  ++LK    R V
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 139/586 (23%), Positives = 250/586 (42%), Gaps = 108/586 (18%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            L +A    E M+ +GH  D      L+  LCKA K+ +A + M  M S GI+P+  S+  
Sbjct: 529  LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588

Query: 139  LVNC-----------------------------------LCKKGNVGYAMQLVEKMEDYG 163
            L+N                                    LCK G++  A + ++ +    
Sbjct: 589  LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648

Query: 164  YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
               +TV YN+L+  +C  GNL +++     ++Q+ ++P+++TY+ L+    ++     A+
Sbjct: 649  AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708

Query: 224  KLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                +  A+G   PN V Y   + G+ K G+ +  I F   + + G  P++V+ N ++  
Sbjct: 709  LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768

Query: 283  LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG----------------SLAYHGK--- 323
                G+ E+ N+LL EM   +  P + TYNIL+                 S+  +G    
Sbjct: 769  YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828

Query: 324  --TDHAL--------------KVLDEMVKGRFRPSAASYNPIIARLCSEGKV-------- 359
              T H+L              K+L   +         ++N +I++ C+ G++        
Sbjct: 829  KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888

Query: 360  --------------DLVVKCLDQ---------MFHRRCK----PNEGTYNGLAM-LCGVG 391
                          D +V  L++         + H   K    P    Y GL   LC VG
Sbjct: 889  VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948

Query: 392  KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
             ++ AF + + +   +   P      ++ +L + GK  +A  LL  M K    P   +++
Sbjct: 949  DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008

Query: 452  SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            +L+   C  G + EALE+ VVM     K D+ ++N L+ GLC      L+ E+++ M   
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1068

Query: 512  GQMPNETTYTILVEG-IAHQDELELSAEVLKELQLRQVVSESAVER 556
            G + N TTY  L+ G +A +     +  +LK+L  R  ++  ++ +
Sbjct: 1069 GFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1114



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 188/411 (45%), Gaps = 1/411 (0%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           + S Y  L+    ++G +  ++++   M  YG+  +  T N+++  +   G       FL
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++++ + P+  T++ L+     E     +  L+  +   G  P +V+YN +L   CK+
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR + AI     + SKG + +V +YN+L+  LC   R  +   LL +M      P  VTY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N LI   +  GK   A ++L+EM+     P+  ++N +I    SEG     +K    M  
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +   P+E +Y  L   LC   +   A      +        +  Y  +I  LC+ G   +
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL EM+K G  PD  TYS+LI G C  G  + A EI   +      P+   ++ L+ 
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
             C+      ++ +++ MI +G   +  T+ +LV  +    ++  + E ++
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 219/522 (41%), Gaps = 47/522 (9%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++A + L  M   G  PD+V  + L+   CK  + K A +++  +   G+ P+   Y+ 
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C+ G +  A+++ E M   G+  +  T+N LV  LC  G + ++ +F+  +   G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++PN  ++  L+           A  + D++   G  P   +Y  LL GLCK G   EA 
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +F + L +     + V YN LL ++C  G   +A  L  EM      P   TY  LI  L
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698

Query: 319 AYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              GKT  A+    E   +G   P+   Y   +  +   G+    +   +QM +    P+
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758

Query: 378 EGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQ-------------------EFY 415
             T N  AM+ G   +GK+++   ++  +GN QN  P                     F 
Sbjct: 759 IVTTN--AMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFL 815

Query: 416 KY-----------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            Y                 ++  +C         ++L      G   D YT++ LI   C
Sbjct: 816 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 875

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G I  A ++  VM       D D  +A++  L ++ R   S  V   M ++G  P   
Sbjct: 876 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 935

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQV----VSESAVER 556
            Y  L+ G+    +++ +  V +E+   ++    V+ESA+ R
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 1/360 (0%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           +N   Y+ L+R     G +  SL+    +   G  P+ +T + +L +  K     +    
Sbjct: 161 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           L +++ +   P++ ++N+L+  LC EG  E++    + +   G+ P +V+YN +L   C 
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +GR++ A ELL  M        + TYN+LI  L    +      +L +M K    P+  +
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
           YN +I    +EGKV +  + L++M      PN  T+N L       G  +EA  +   + 
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K  +  +  Y  ++  LC+  +   A      M + G      TY+ +I GLC  G ++
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+ +   M +    PD+  ++AL+ G CK  R   + E+   +   G  PN   Y+ L+
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 104/206 (50%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            ++N AF  ++ M S G   D      ++  L + ++ +++  V+  M   GI P++  Y 
Sbjct: 879  EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+N LC+ G++  A  + E+M  +      V  +++VR L   G  +++   L  +++ 
Sbjct: 939  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             LVP   +++ L+    K   V  A++L   +   G K +LVSYNVL+TGLC +G    A
Sbjct: 999  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSL 283
               + ++   GF  N  +Y  L+R L
Sbjct: 1059 FELYEEMKGDGFLANATTYKALIRGL 1084



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 1/179 (0%)

Query: 371 HRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +R C  N   Y+ L  +    G +Q++  I + +G    +        ++ S+ + G+  
Sbjct: 156 YRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 215

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             +  L EM K    PD  T++ LI  LC EG  E++  +   ME+  Y P +  +N +L
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
              CK  R   ++E+   M  KG   +  TY +L+  +   + +     +L++++ R +
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 235/497 (47%), Gaps = 41/497 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GI 129
           D   R H+   A     +++  G + +++ A +LL   C+A +  +A+ ++       G 
Sbjct: 132 DCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGC 191

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--PTNTVTYNSLVRGLCMLGNLNQS 187
           +PD  SY+ L+  LC +G  G A  L+  M + G     N V YN+++ G    G++N++
Sbjct: 192 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKA 251

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                 ++Q+G+ P+  TY+ ++ A  K R +  A   L  ++ K   PN  +YN L+ G
Sbjct: 252 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 311

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               G+ +EA+R F+++      P+VV+ ++L+ SLC  G+ +EA ++   M    ++P 
Sbjct: 312 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 371

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +YNI++   A  G       + D M+     P   ++N +I    + G +D  +   +
Sbjct: 372 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 431

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQE------------- 413
           +M     KP+  TY   +A LC +GK+ +A      + + Q  +P +             
Sbjct: 432 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID-QGVAPDKYAYNCLIQGFCTH 490

Query: 414 -----------------------FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
                                  F+  +I +LC+ G+   A  +       G  PD+  Y
Sbjct: 491 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 550

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S L+ G C+ G +E+AL +F  M     +P+V  +  L+ G CK  R D  L +F+ M++
Sbjct: 551 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ 610

Query: 511 KGQMPNETTYTILVEGI 527
           +G  P+   Y+I+++G+
Sbjct: 611 RGIKPSTILYSIIIDGL 627



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 228/465 (49%), Gaps = 3/465 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AFL+  +MV+K   P+     NL+Y      + K+A++V + M    I+PD  + + L+
Sbjct: 287 EAFLR--QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 344

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCK G +  A  + + M   G   +  +YN ++ G    G L       D ++  G+ 
Sbjct: 345 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 404

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ +T++ L++A      +  AM + +++   G KP++V+Y  ++  LC+ G+ ++A+  
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 464

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +  +G  P+  +YN L++  C  G   +A EL++E+        IV ++ +I +L  
Sbjct: 465 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 524

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+   A  + D  V     P A  Y+ ++   C  GK++  ++  D M     +PN   
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  L    C +G++ E  ++ + +  +        Y  +I  L + G+T  A    +EMT
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMT 644

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G   D  TY+ ++RGL      +EA+ +F  +   + K ++   N ++ G+ ++RR +
Sbjct: 645 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 704

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + ++F  +     +PN  TY+I++  +  +  +E + ++   +Q
Sbjct: 705 EAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQ 749



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 233/537 (43%), Gaps = 73/537 (13%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII--PDASSYTYLVNCL 143
           L R    G  PDV   + LL  LC   K  +A  ++ MM   G +  P+  +Y  +++  
Sbjct: 183 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 242

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
            K+G+V  A  L ++M   G P + VTYNS+V  LC    ++++  FL +++ K ++PN 
Sbjct: 243 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 302

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           +TY+ L+           A+++  ++      P++V+ ++L+  LCK G+ +EA   F  
Sbjct: 303 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 362

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  KG  P+V SYNI+L     +G   +  +L   M G   +P   T+N+LI + A  G 
Sbjct: 363 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 422

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+ + +EM     +P   +Y  +IA LC  GK+D  ++  +QM  +   P++  YN 
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR------------------ 424
           L    C  G + +A  +I  + N        F+  +I +LC+                  
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542

Query: 425 -----------------KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                             GK  +A ++   M   G  P+   Y +L+ G C  G I+E L
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602

Query: 468 EIFVVMEEYDYKP-----------------------------------DVDNFNALLLGL 492
            +F  M +   KP                                   D+  +N +L GL
Sbjct: 603 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 662

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            K+R  D ++ +F+ +       N  T   +++G+     +E + ++   +   ++V
Sbjct: 663 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 719



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 173/384 (45%), Gaps = 39/384 (10%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P + TY+ L++   +      A+     ++  G + N++  N LL G C+  RT+EA+
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 259 R-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILI 315
                  P  G  P+V SY+ILL+SLC +G+  +A++LL  M  G    SP +V YN +I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  + A  +  EMV+    P   +YN ++  LC    +D     L QM ++R  
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 376 PNEGTYNGL------------------------------------AMLCGVGKVQEAFAI 399
           PN  TYN L                                      LC  GK++EA  +
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
             ++  K  +     Y  ++     KG       L   M   G  PD YT++ LI+    
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G++++A+ IF  M ++  KPDV  +  ++  LC+  + D ++E F  MI++G  P++  
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 479

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
           Y  L++G      L  + E++ E+
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEI 503



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 200/453 (44%), Gaps = 41/453 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
           P + +Y  L++C  +      A+    ++   G   N +  N L+ G C     +++L  
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG---KPNLVSYNVLLT 246
            L R  + G VP+ F+YS LL++   +     A  LL  ++A+GG    PN+V+YN ++ 
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVCSPNVVAYNTVID 240

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME-------------------- 286
           G  KEG   +A   F+++  +G  P++V+YN ++ +LC                      
Sbjct: 241 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 300

Query: 287 ---------------GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
                          G+W+EA  +  EM      P +VT ++L+GSL  +GK   A  V 
Sbjct: 301 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 360

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGV 390
           D M      P   SYN ++    ++G +  +    D M      P+  T+N L       
Sbjct: 361 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 420

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G + +A  I   + +         Y+ VI +LCR GK   A +   +M   G  PD Y Y
Sbjct: 421 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 480

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + LI+G C  G + +A E+   +       D+  F++++  LCK  R   +  +F + + 
Sbjct: 481 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 540

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G  P+   Y++L++G     ++E +  V   +
Sbjct: 541 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 573



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 182/388 (46%), Gaps = 6/388 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A +    M   G KPDVV    ++  LC+  KM  A++    M+  G+ PD  +Y  
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C  G++  A +L+ ++ + G   + V ++S++  LC LG +  +    D  +  G
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+A  YS L++       +  A+++ D +++ G +PN+V Y  L+ G CK GR +E +
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  +G +P+ + Y+I++  L   GR   A     EM     +  I TYNI++  L
Sbjct: 603 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 662

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +   D A+ +  E+     + +  + N +I  +    +V+        +   R  PN 
Sbjct: 663 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNV 722

Query: 379 GTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+  +  L   G V+EA  +  S+ N           +V+  L +K +  +A   L +
Sbjct: 723 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSK 782

Query: 438 MTKYGFTPDSYTYSSLI-----RGLCME 460
           + +  F+ +  T   L+     +G C E
Sbjct: 783 IDERNFSLEHLTAMLLVDLFSSKGTCRE 810



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 193/428 (45%), Gaps = 21/428 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    + M  KG  PDV     +L        +     + ++M+  GI PD  ++ 
Sbjct: 352 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 411

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+      G +  AM +  +M D+G   + VTY +++  LC +G ++ +++  +++I +
Sbjct: 412 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 471

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ + Y+ L++       +  A +L+ +I+  G   ++V ++ ++  LCK GR  +A
Sbjct: 472 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 531

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F    + G  P+ V Y++L+   C+ G+ E+A  +   M      P +V Y  L+  
Sbjct: 532 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 591

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D  L +  EM++   +PS   Y+ II  L   G+              + K +
Sbjct: 592 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT----------VPAKMKFH 641

Query: 378 EGTYNGLAM-LCGVGKV----------QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           E T +G+AM +C    V           EA  + + L              +I  + +  
Sbjct: 642 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 701

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  L   +++    P+  TYS +I  L  EGL+EEA ++F  M+    +P+    N
Sbjct: 702 RVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLN 761

Query: 487 ALLLGLCK 494
            ++  L K
Sbjct: 762 HVVRELLK 769


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 235/497 (47%), Gaps = 41/497 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GI 129
           D   R H+   A     +++  G + +++ A +LL   C+A +  +A+ ++       G 
Sbjct: 119 DCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGC 178

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--PTNTVTYNSLVRGLCMLGNLNQS 187
           +PD  SY+ L+  LC +G  G A  L+  M + G     N V YN+++ G    G++N++
Sbjct: 179 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKA 238

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                 ++Q+G+ P+  TY+ ++ A  K R +  A   L  ++ K   PN  +YN L+ G
Sbjct: 239 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 298

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               G+ +EA+R F+++      P+VV+ ++L+ SLC  G+ +EA ++   M    ++P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +YNI++   A  G       + D M+     P   ++N +I    + G +D  +   +
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQE------------- 413
           +M     KP+  TY   +A LC +GK+ +A      + + Q  +P +             
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID-QGVAPDKYAYNCLIQGFCTH 477

Query: 414 -----------------------FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
                                  F+  +I +LC+ G+   A  +       G  PD+  Y
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 537

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S L+ G C+ G +E+AL +F  M     +P+V  +  L+ G CK  R D  L +F+ M++
Sbjct: 538 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ 597

Query: 511 KGQMPNETTYTILVEGI 527
           +G  P+   Y+I+++G+
Sbjct: 598 RGIKPSTILYSIIIDGL 614



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 228/465 (49%), Gaps = 3/465 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AFL+  +MV+K   P+     NL+Y      + K+A++V + M    I+PD  + + L+
Sbjct: 274 EAFLR--QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCK G +  A  + + M   G   +  +YN ++ G    G L       D ++  G+ 
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ +T++ L++A      +  AM + +++   G KP++V+Y  ++  LC+ G+ ++A+  
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +  +G  P+  +YN L++  C  G   +A EL++E+        IV ++ +I +L  
Sbjct: 452 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+   A  + D  V     P A  Y+ ++   C  GK++  ++  D M     +PN   
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  L    C +G++ E  ++ + +  +        Y  +I  L + G+T  A    +EMT
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT 631

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G   D  TY+ ++RGL      +EA+ +F  +   + K ++   N ++ G+ ++RR +
Sbjct: 632 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 691

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + ++F  +     +P+  TY+I++  +  +  +E + ++   +Q
Sbjct: 692 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 233/537 (43%), Gaps = 73/537 (13%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII--PDASSYTYLVNCL 143
           L R    G  PDV   + LL  LC   K  +A  ++ MM   G +  P+  +Y  +++  
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 229

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
            K+G+V  A  L ++M   G P + VTYNS+V  LC    ++++  FL +++ K ++PN 
Sbjct: 230 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 289

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           +TY+ L+           A+++  ++      P++V+ ++L+  LCK G+ +EA   F  
Sbjct: 290 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDT 349

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  KG  P+V SYNI+L     +G   +  +L   M G   +P   T+N+LI + A  G 
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 409

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+ + +EM     +P   +Y  +IA LC  GK+D  ++  +QM  +   P++  YN 
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR------------------ 424
           L    C  G + +A  +I  + N        F+  +I +LC+                  
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 425 -----------------KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                             GK  +A ++   M   G  P+   Y +L+ G C  G I+E L
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589

Query: 468 EIFVVMEEYDYKP-----------------------------------DVDNFNALLLGL 492
            +F  M +   KP                                   D+  +N +L GL
Sbjct: 590 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGL 649

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            K+R  D ++ +F+ +       N  T   +++G+     +E + ++   +   ++V
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLV 706



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 173/384 (45%), Gaps = 39/384 (10%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P + TY+ L++   +      A+     ++  G + N++  N LL G C+  RT+EA+
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 259 R-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILI 315
                  P  G  P+V SY+ILL+SLC +G+  +A++LL  M  G    SP +V YN +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  + A  +  EMV+    P   +YN ++  LC    +D     L QM ++R  
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 376 PNEGTYNGL------------------------------------AMLCGVGKVQEAFAI 399
           PN  TYN L                                      LC  GK++EA  +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
             ++  K  +     Y  ++     KG       L   M   G  PD YT++ LI+    
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G++++A+ IF  M ++  KPDV  +  ++  LC+  + D ++E F  MI++G  P++  
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
           Y  L++G      L  + E++ E+
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEI 490



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 200/453 (44%), Gaps = 41/453 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
           P + +Y  L++C  +      A+    ++   G   N +  N L+ G C     +++L  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG---KPNLVSYNVLLT 246
            L R  + G VP+ F+YS LL++   +     A  LL  ++A+GG    PN+V+YN ++ 
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVCSPNVVAYNTVID 227

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME-------------------- 286
           G  KEG   +A   F+++  +G  P++V+YN ++ +LC                      
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 287

Query: 287 ---------------GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
                          G+W+EA  +  EM      P +VT ++L+GSL  +GK   A  V 
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGV 390
           D M      P   SYN ++    ++G +  +    D M      P+  T+N L       
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 407

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G + +A  I   + +         Y+ VI +LCR GK   A +   +M   G  PD Y Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + LI+G C  G + +A E+   +       D+  F++++  LCK  R   +  +F + + 
Sbjct: 468 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G  P+   Y++L++G     ++E +  V   +
Sbjct: 528 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 560



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 182/388 (46%), Gaps = 6/388 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A +    M   G KPDVV    ++  LC+  KM  A++    M+  G+ PD  +Y  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C  G++  A +L+ ++ + G   + V ++S++  LC LG +  +    D  +  G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+A  YS L++       +  A+++ D +++ G +PN+V Y  L+ G CK GR +E +
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  +G +P+ + Y+I++  L   GR   A     EM     +  I TYNI++  L
Sbjct: 590 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGL 649

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +   D A+ +  E+     + +  + N +I  +    +V+        +   R  P+ 
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSV 709

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ +   L   G V+EA  +  S+ N           +V+  L +K +  +A   L +
Sbjct: 710 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSK 769

Query: 438 MTKYGFTPDSYTYSSLI-----RGLCME 460
           + +  F+ +  T   L+     +G C E
Sbjct: 770 IDERNFSLEHLTTMLLVDLFSSKGTCRE 797



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 192/428 (44%), Gaps = 21/428 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    + M  KG  PDV     +L        +     + ++M+  GI PD  ++ 
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFN 398

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+      G +  AM +  +M D+G   + VTY +++  LC +G ++ +++  +++I +
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ + Y+ L++       +  A +L+ +I+  G   ++V ++ ++  LCK GR  +A
Sbjct: 459 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F    + G  P+ V Y++L+   C+ G+ E+A  +   M      P +V Y  L+  
Sbjct: 519 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 578

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D  L +  EM++   +PS   Y+ II  L   G+              + K +
Sbjct: 579 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT----------VPAKVKFH 628

Query: 378 EGTYNGLAM-LCGVGKV----------QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           E T +G+AM +C    V           EA  + + L              +I  + +  
Sbjct: 629 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 688

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  L   +++    P   TYS +I  L  EGL+EEA ++F  M+    +P+    N
Sbjct: 689 RVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLN 748

Query: 487 ALLLGLCK 494
            ++  L K
Sbjct: 749 HVVRELLK 756


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 259/603 (42%), Gaps = 81/603 (13%)

Query: 1   MATLLSSVSTLANPSPEPFRKAYGFYSQIPNLHSFSLNK-------GFI-RVLASTQVTI 52
           +   L ++  L +  P PF      Y+ +PN  S +          G++  VLA   V +
Sbjct: 105 LVCFLRALRLLPSSPPRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLL 164

Query: 53  SPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKAN 112
           +  D+  T   R                      + M+S G  P+V     L+  LC   
Sbjct: 165 ALSDASLTSARR--------------------FFDSMLSDGVAPNVYTYNILVRALCGRG 204

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
             K+A+ ++  M  +G  P+  +Y  LV    + G V  A +LV  M + G   N VT+N
Sbjct: 205 HRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFN 264

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           S+V G+C  G +  + +  D ++++GL P+  +Y+ L+    K    H A+ +  ++  K
Sbjct: 265 SMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK 324

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G  P++V++  L+  +CK G  E A+   R +  +G + N V++  L+   C +G  ++A
Sbjct: 325 GIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 384

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
              +  M      P++V YN LI      G+ D A ++L EM     +P   +Y+ II+ 
Sbjct: 385 LLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 444

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP 411
            C         +   QM  +   P+  TY+ L  +LCG  ++ +A  + +++  K    P
Sbjct: 445 YCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNM-IKLGLQP 503

Query: 412 QEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL------------- 457
            EF Y  +I   C++G    A  L  +M K G  PD  TYS LI GL             
Sbjct: 504 DEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563

Query: 458 -------------------------------------CMEGLIEEALEIFVVMEEYDYKP 480
                                                CM+GL+ EA +++  M + ++  
Sbjct: 564 FKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNL 623

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D   ++ L+ G C++     +L   + M++ G  PN T+   L+ G+     +  + +V+
Sbjct: 624 DGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVI 683

Query: 541 KEL 543
           ++L
Sbjct: 684 QQL 686



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 213/455 (46%), Gaps = 16/455 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ DA    + MV +G  PD V    L+   CKA    +A+ V   M   GI+PD  ++T
Sbjct: 275 KMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFT 334

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ +CK GN+  A+ LV +M + G   N VT+ +L+ G C  G L+ +L  +  + Q 
Sbjct: 335 SLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQC 394

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+   Y+ L+        +  A +LL ++ AKG KP++V+Y+ +++  CK   T  A
Sbjct: 395 RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSA 454

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + +  KG  P+ ++Y+ L+R LC E R  +A+ L   M      P   TY  LI  
Sbjct: 455 FELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 514

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  + AL + D+MVK    P   +Y+ +I  L    +     + L +++H    P 
Sbjct: 515 HCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPA 574

Query: 378 EGTYNG-------------LAML---CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
              Y+              LA+L   C  G + EA  + QS+ ++  +     Y  +I  
Sbjct: 575 NTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHG 634

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            CR G   +A     +M + GF P+S +  SLIRGL   G++ EA ++   +  Y    D
Sbjct: 635 HCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLAD 694

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            +   AL+         D  L+V   M + G +P+
Sbjct: 695 AEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 167/328 (50%), Gaps = 6/328 (1%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P++++YN +L  L     T  A RFF  + S G  PNV +YNIL+R+LC  G  +EA  +
Sbjct: 154 PSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L +M G    P +VTYN L+ +    G+ D A +++  M +G  +P+  ++N ++  +C 
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            GK++   K  D+M      P+  +YN L    C  G   EA ++   +  K        
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  +I  +C+ G   +A  L+ +M + G   +  T+++LI G C +G +++AL     M+
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH----Q 530
           +   KP V  +NAL+ G C   R D + E+   M  KG  P+  TY+ ++          
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 531 DELELSAEVLKELQLRQVVSESAVERLV 558
              EL+ ++L++  L   ++ S++ R++
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVL 480


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 217/471 (46%), Gaps = 9/471 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L DA   L     +   P VV    L+   CK   +  A     MM+  G++PD  
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L++ LC  G++  A++    ME++G   + VTYN L  G  +LG ++ + + + R+
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRM 366

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GL P+  TY+ L+    +   +  + KL + ++++G K ++V+Y VLL+ LCK GR 
Sbjct: 367 LLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRI 426

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+    ++   G +P++++Y+         G  EEA EL  EM      P     + +
Sbjct: 427 DEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAI 478

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G    A    D + K         YN +I      G +   V+   Q+  +  
Sbjct: 479 ISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGI 538

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P   T+N L    C  GK+ EA  ++ ++           Y  ++   C +G  +  F 
Sbjct: 539 SPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFD 598

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L+EM      P   TY+ +++GLC EG + E++++   M      PD   +N ++   C
Sbjct: 599 MLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFC 658

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           K+     + ++   M++    P+  TY +L+ G+     L+ +  +L  LQ
Sbjct: 659 KAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQ 709



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 216/465 (46%), Gaps = 28/465 (6%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A+  ++RM+  G  PD+V  T L+   C+   ++++ K+ E M+S G+     +YT 
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN-------------------------- 172
           L++ LCK G +  A+ L+ +ME  G   + +TY+                          
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVC 475

Query: 173 -SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
            +++ GL   G ++++  + D + +  +      Y+ +++   K   +  A++    II 
Sbjct: 476 SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE 535

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           KG  P +V++N L+ G CK+G+  EA++    +   G  P  V+Y  L+   C EG    
Sbjct: 536 KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHS 595

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
             ++L EM+     PT +TY +++  L   G+   ++++L  M      P   +YN +I 
Sbjct: 596 MFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQ 655

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
             C    +    +  +QM     +P+  TYN L   LC  G +++A  ++ +L ++    
Sbjct: 656 SFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL 715

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
            +  Y  +I + C KG    A    ++M + GF      YS++I  LC   LI +A   F
Sbjct: 716 TKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFF 775

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
            +M  +   PD D    +L    +S   +   E+F MMI+ G +P
Sbjct: 776 CMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/498 (23%), Positives = 230/498 (46%), Gaps = 51/498 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++DA   L +M     +  +    +LLY+L   + M     V   + +SG+  +  
Sbjct: 180 RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQNEY 236

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L++ LC++  +  A+  + +     +  + V++N+L+ G C +G+++ +  F   +
Sbjct: 237 TNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMM 296

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+ GL+P+ ++Y+ LL        +  A++  +D+   G +P++V+YN+L  G    G  
Sbjct: 297 IKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLI 356

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A +  + +   G  P++V+Y IL+   C  G  EE+ +L  +M       +IVTY +L
Sbjct: 357 SGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVL 416

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + SL   G+ D A+ +L EM     +P   +Y        S G V+  ++  ++M  +R 
Sbjct: 417 LSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY--------SRGAVEEAIELYEEMCSKRI 468

Query: 375 KPNEGTYNGLAMLCGV---GKVQEA-------------------------FAIIQSLGNK 406
            PN  ++   A++ G+   G + EA                         +A + ++G  
Sbjct: 469 YPN--SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 526

Query: 407 QNSSPQEF----------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             S  Q            +  +I   C+KGK  +A +LL  +  +G  P S TY++L+ G
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 586

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            C EG +    ++   ME    KP    +  ++ GLCK  R   S+++ + M  +G  P+
Sbjct: 587 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 646

Query: 517 ETTYTILVEGIAHQDELE 534
           + TY  +++      +L+
Sbjct: 647 QITYNTVIQSFCKAHDLQ 664



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 90/197 (45%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L+++   L+ M ++G  PD +    ++   CKA+ ++KA ++   M+   + P   
Sbjct: 624 KEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPV 683

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LC  GN+  A +L+  ++D       V Y ++++  C  G++  +L F  ++
Sbjct: 684 TYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 743

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G   +   YS ++    K   +  A      ++  G  P+     V+L    + G  
Sbjct: 744 VERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDP 803

Query: 255 EEAIRFFRDLPSKGFEP 271
                 F  +   G  P
Sbjct: 804 NSVFEIFAMMIKCGLLP 820


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 236/500 (47%), Gaps = 6/500 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GI 129
           D   R H+   A     +++  G + D + A++LL   C+A +  +A+ ++       G 
Sbjct: 121 DCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGC 180

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--PTNTVTYNSLVRGLCMLGNLNQS 187
           +PD  SY  L+  LC +G  G A  L+  M + G     + V YN+++ G    G++N++
Sbjct: 181 VPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKA 240

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                 ++Q+G+ P+  TYS ++ A  K R +  A   L  ++ KG  P+  +YN L+ G
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               G+ +EA+R F+++  +   P+VV+ N L+ SLC  G+ +EA ++   M    ++P 
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +Y I++   A  G       + D M+     P   ++N +I    + G +D  +   +
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 420

Query: 368 QMFHRRCKPNEGTY-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRK 425
           +M     KP+  TY   +A LC +GK+ +A      + + Q   P ++ Y  +I   C  
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID-QGVVPDKYAYHCLIQGFCTH 479

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   +A +L+ E+   G   D   + S+I  LC  G + +A  IF +       PD   +
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 539

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           N L+ G C   + + +L VF  M+  G  PN   Y  LV G      ++    + +E+  
Sbjct: 540 NMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ 599

Query: 546 RQVVSESAVERLVMQYDFEG 565
           + +   + +  +++   FE 
Sbjct: 600 KGIKPSTILYNIIIDGLFEA 619



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/510 (23%), Positives = 234/510 (45%), Gaps = 36/510 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  +N A    + MV +G  PD+V  +++++ LCKA  M KA   +  MV+ G++
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+      G    A+++ ++M       + V  N+L+  LC  G + ++   
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 191 LDRLIQKGLVPNAFTYSFLLEA----------------------------------AYKE 216
            D +  KG  P+ F+Y+ +L                                    AY  
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408

Query: 217 RG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            G +  AM + +++   G KP++V+Y  ++  LC+ G+ ++A+  F  +  +G  P+  +
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ L++  C  G   +A EL++E+        IV +  +I +L   G+   A  + D  V
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
                P A  YN ++   C  GK++  ++  D M     +PN   Y  L    C +G++ 
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           E  ++ + +  K        Y  +I  L   G+T  A    +EMT+ G   +  TYS ++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           RGL      +EA+ +F  +   + K D+   N ++ G+ ++RR + + ++F  +   G +
Sbjct: 649 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 708

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
           P   TY+I++  +  +  +E + ++   +Q
Sbjct: 709 PCAVTYSIMITNLIKEGLVEEAEDMFSSMQ 738



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 193/420 (45%), Gaps = 5/420 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    + M  KG  PDV   T +L        +     + ++M+  GI P   ++ 
Sbjct: 341 KIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFN 400

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+      G +  AM +  +M D+G   + VTY +++  LC +G ++ +++  +++I +
Sbjct: 401 VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+VP+ + Y  L++       +  A +L+ +I+  G + ++V +  ++  LCK GR  +A
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F    + G  P+ V YN+L+   C+ G+ E+A  +   M      P +V Y  L+  
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D  L +  EM++   +PS   YN II  L   G+         +M       N
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640

Query: 378 EGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           + TY+   +L G+ K     EA  + + L              +I  + +  +  +A  L
Sbjct: 641 KCTYS--IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              +++ G  P + TYS +I  L  EGL+EEA ++F  M+    +PD    N ++  L K
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 199/470 (42%), Gaps = 45/470 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
           P + +Y  L++C  +      A+    ++   G   + +  + L++G C     +++L  
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAA------------------------------------ 213
            L R  + G VP+ F+Y+ LL++                                     
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 214 -YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
            +KE  V+ A  L  +++ +G  P+LV+Y+ ++  LCK    ++A  F R + +KG  P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             +YN L+      G+W+EA  +  EM      P +V  N L+GSL  +GK   A  V D
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVG 391
            M      P   SY  ++    ++G +  +    D M      P   T+N L       G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 410

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            + +A  I   + +         Y  VI +LCR GK   A +   +M   G  PD Y Y 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            LI+G C  G + +A E+   +     + D+  F +++  LCK  R   +  +F + +  
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           G  P+   Y +L++G     ++E      K L++   +  + +E  V+ Y
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKME------KALRVFDAMVSAGIEPNVVGY 574



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 170/384 (44%), Gaps = 39/384 (10%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P ++TY+ L++   +      A+     ++  G + + +  + LL G C+  RT+EA+
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 259 R-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILI 315
                  P  G  P+V SYNILL+SLC +G+  +A++LL  M  G    SP +V YN +I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  + A  +  EMV+    P   +Y+ ++  LC    +D     L QM ++   
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 376 PNEGTYNGL------------------------------------AMLCGVGKVQEAFAI 399
           P+  TYN L                                      LC  GK++EA  +
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
             ++  K  +     Y  ++     KG       L   M   G  P   T++ LI+    
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G++++A+ IF  M ++  KP V  +  ++  LC+  + D ++E F  MI++G +P++  
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
           Y  L++G      L  + E++ E+
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEI 492



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 178/388 (45%), Gaps = 6/388 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A +    M   G KP VV    ++  LC+  KM  A++    M+  G++PD  +Y  
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C  G++  A +L+ ++ + G   + V + S++  LC LG +  +    D  +  G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+A  Y+ L++       +  A+++ D +++ G +PN+V Y  L+ G CK GR +E +
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  KG +P+ + YNI++  L   GR   A     EM     +    TY+I++  L
Sbjct: 592 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 651

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +   D A+ +  E+     +    + N +IA +    +V+        +      P  
Sbjct: 652 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCA 711

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ +   L   G V+EA  +  S+ N           +V+  L +K +  +A   L +
Sbjct: 712 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 771

Query: 438 MTKYGFTPDSYTYSSLI-----RGLCME 460
           + +  F+ +  T   L+     +G C E
Sbjct: 772 IDERNFSLEHLTAMLLVDLFSSKGTCRE 799


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 230/497 (46%), Gaps = 36/497 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M+ +   PDV     L+  LC     +K+  +M+ M  SG  P   +Y  +++  CK
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG    A++L++ M+  G   +  TYN L+  LC    + +    L  + ++ + PN  T
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+     E  V  A +LL+++++ G  PN V++N L+ G   EG  +EA++ F  + 
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +KG  P+ VSY +LL  LC    ++ A      M         +TY  +I  L  +G  D
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+ +L+EM K    P   +Y+ +I   C  G+     + + +++     PN   Y+ L 
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT---------------- 428
              C +G ++EA  I +++  + ++     +  ++TSLC+ GK                 
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540

Query: 429 -------------------YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                               +AF +  EMTK G  P  +TY SL++GLC  G + EA + 
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              +       D   +N LL  +CKS     ++ +F  M+++  +P+  TYT L+ G+  
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660

Query: 530 QDELELSAEVLKELQLR 546
           + +  ++    KE + R
Sbjct: 661 KGKTVIAILFAKEAEAR 677



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 212/480 (44%), Gaps = 2/480 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D    +    +A      M +KG  P  V    LL  LCK  +   A      M  +G+ 
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
               +YT +++ LCK G +  A+ L+ +M   G   + VTY++L+ G C +G    + + 
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + R+ + GL PN   YS L+    +   +  A+++ + +I +G   +  ++NVL+T LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA  F R + S G  PN VS++ L+      G   +A  +  EM      PT  T
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 580

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+  L   G    A K L  +           YN ++  +C  G +   V    +M 
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKT 428
            R   P+  TY  L + LC  GK   A    +    + N  P +  Y   +  + + G+ 
Sbjct: 641 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
                   +M   G TPD  T +++I G    G IE+  ++   M   +  P++  +N L
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           L G  K +    S  +++ +I  G +P++ T   LV GI   + LE+  ++LK    R V
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 139/586 (23%), Positives = 250/586 (42%), Gaps = 108/586 (18%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            L +A    E M+ +GH  D      L+  LCKA K+ +A + M  M S GI+P+  S+  
Sbjct: 489  LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 139  LVNC-----------------------------------LCKKGNVGYAMQLVEKMEDYG 163
            L+N                                    LCK G++  A + ++ +    
Sbjct: 549  LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 164  YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
               +TV YN+L+  +C  GNL +++     ++Q+ ++P+++TY+ L+    ++     A+
Sbjct: 609  AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 224  KLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                +  A+G   PN V Y   + G+ K G+ +  I F   + + G  P++V+ N ++  
Sbjct: 669  LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 283  LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG----------------SLAYHGK--- 323
                G+ E+ N+LL EM   +  P + TYNIL+                 S+  +G    
Sbjct: 729  YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788

Query: 324  --TDHAL--------------KVLDEMVKGRFRPSAASYNPIIARLCSEGKV-------- 359
              T H+L              K+L   +         ++N +I++ C+ G++        
Sbjct: 789  KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848

Query: 360  --------------DLVVKCLDQ---------MFHRRCK----PNEGTYNGLAM-LCGVG 391
                          D +V  L++         + H   K    P    Y GL   LC VG
Sbjct: 849  VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908

Query: 392  KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
             ++ AF + + +   +   P      ++ +L + GK  +A  LL  M K    P   +++
Sbjct: 909  DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968

Query: 452  SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            +L+   C  G + EALE+ VVM     K D+ ++N L+ GLC      L+ E+++ M   
Sbjct: 969  TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028

Query: 512  GQMPNETTYTILVEG-IAHQDELELSAEVLKELQLRQVVSESAVER 556
            G + N TTY  L+ G +A +     +  +LK+L  R  ++  ++ +
Sbjct: 1029 GFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 188/411 (45%), Gaps = 1/411 (0%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           + S Y  L+    ++G +  ++++   M  YG+  +  T N+++  +   G       FL
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++++ + P+  T++ L+     E     +  L+  +   G  P +V+YN +L   CK+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR + AI     + SKG + +V +YN+L+  LC   R  +   LL +M      P  VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N LI   +  GK   A ++L+EM+     P+  ++N +I    SEG     +K    M  
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +   P+E +Y  L   LC   +   A      +        +  Y  +I  LC+ G   +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL EM+K G  PD  TYS+LI G C  G  + A EI   +      P+   ++ L+ 
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
             C+      ++ +++ MI +G   +  T+ +LV  +    ++  + E ++
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 219/522 (41%), Gaps = 47/522 (9%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++A + L  M   G  PD+V  + L+   CK  + K A +++  +   G+ P+   Y+ 
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C+ G +  A+++ E M   G+  +  T+N LV  LC  G + ++ +F+  +   G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++PN  ++  L+           A  + D++   G  P   +Y  LL GLCK G   EA 
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +F + L +     + V YN LL ++C  G   +A  L  EM      P   TY  LI  L
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 319 AYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              GKT  A+    E   +G   P+   Y   +  +   G+    +   +QM +    P+
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718

Query: 378 EGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQ-------------------EFY 415
             T N  AM+ G   +GK+++   ++  +GN QN  P                     F 
Sbjct: 719 IVTTN--AMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFL 775

Query: 416 KY-----------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            Y                 ++  +C         ++L      G   D YT++ LI   C
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G I  A ++  VM       D D  +A++  L ++ R   S  V   M ++G  P   
Sbjct: 836 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQV----VSESAVER 556
            Y  L+ G+    +++ +  V +E+   ++    V+ESA+ R
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 1/360 (0%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           +N   Y+ L+R     G +  SL+    +   G  P+ +T + +L +  K     +    
Sbjct: 121 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           L +++ +   P++ ++N+L+  LC EG  E++    + +   G+ P +V+YN +L   C 
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +GR++ A ELL  M        + TYN+LI  L    +      +L +M K    P+  +
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
           YN +I    +EGKV +  + L++M      PN  T+N L       G  +EA  +   + 
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K  +  +  Y  ++  LC+  +   A      M + G      TY+ +I GLC  G ++
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+ +   M +    PD+  ++AL+ G CK  R   + E+   +   G  PN   Y+ L+
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 104/206 (50%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            ++N AF  ++ M S G   D      ++  L + ++ +++  V+  M   GI P++  Y 
Sbjct: 839  EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+N LC+ G++  A  + E+M  +      V  +++VR L   G  +++   L  +++ 
Sbjct: 899  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             LVP   +++ L+    K   V  A++L   +   G K +LVSYNVL+TGLC +G    A
Sbjct: 959  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1018

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSL 283
               + ++   GF  N  +Y  L+R L
Sbjct: 1019 FELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 1/179 (0%)

Query: 371 HRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +R C  N   Y+ L  +    G +Q++  I + +G    +        ++ S+ + G+  
Sbjct: 116 YRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 175

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             +  L EM K    PD  T++ LI  LC EG  E++  +   ME+  Y P +  +N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
              CK  R   ++E+   M  KG   +  TY +L+  +   + +     +L++++ R +
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 229/496 (46%), Gaps = 35/496 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT   ++++   ++    M   G +P+V     LL  LCK NK+  A K++  M + G  
Sbjct: 154 DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 213

Query: 131 PDASSYTY------------------------------LVNCLCKKGNVGYAMQLVEKME 160
           PDA SYT                               L+N LCK+ +   A +L+ +M 
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMV 273

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
           + G   N ++Y++L+  LC  G +  +  FL +++++G  PN +T S L++  +      
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333

Query: 221 AAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
            A+ L + +I   G +PN+V+YN L+ G C  G   +A+  F  +   G  PN+ +Y  L
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +      G  + A  +  +M      P +V Y  ++ +L  H K   A  +++ M K   
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNGLA-MLCGVGKVQEAF 397
            PS  ++N  I  LC  G++D   K   QM  + RC PN  TYN L   L    +++EA+
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            + + +  +        Y  ++   C  G    A QL+ +M   G +PD  T + +I   
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573

Query: 458 CMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           C +G  E A ++   V      ++PDV ++  ++ GLC+S   +  + + + MI  G +P
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633

Query: 516 NETTYTILVEGIAHQD 531
           +  T+++L+      D
Sbjct: 634 SIATWSVLINCFILDD 649



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 215/461 (46%), Gaps = 18/461 (3%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R+   G  P V    ++L  L   N+++    V   M   G  P+  +Y  L+  LCK  
Sbjct: 136 RIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 195

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A +L+ +M + G   + V+Y +++  +C +G + +  +  +R       P    Y+
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYN 250

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    KE     A +L+ +++ KG  PN++SY+ L+  LC  G+ E A  F   +  +
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDH 326
           G  PN+ + + L++   + G   +A +L  +M  G    P +V YN L+     HG    
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY-NGLA 385
           A+ V   M +    P+  +Y  +I      G +D  V   ++M    C PN   Y N + 
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEM-TKYGF 443
            LC   K +EA ++I+ + +K+N +P    +   I  LC  G+   A ++  +M  ++  
Sbjct: 431 ALCRHSKFKEAESLIEIM-SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489

Query: 444 TPDSYTYSSLIRGLCMEGLIEEAL----EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
            P+  TY+ L+ GL     IEEA     EIF+   E+        +N LL G C +    
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSS----STYNTLLHGSCNAGLPG 545

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           ++L++   M+  G+ P+E T  +++     Q + E +A++L
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 198/441 (44%), Gaps = 41/441 (9%)

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           ++A+++   +   G  P    Y ++++ L  +  +     +   M+  G+  N  TYN L
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 187

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           ++ LC    ++ + + L  +  KG  P+A +Y+ ++ +  +   V    +L     A+  
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERF 242

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P +  YN L+ GLCKE   + A    R++  KG  PNV+SY+ L+  LC  G+ E A  
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG-RFRPSAASYNPIIARL 353
            L +M      P I T + L+      G T  AL + ++M++G   +P+  +YN ++   
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
           CS G +   V     M    C PN  TY  L                             
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL----------------------------- 393

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
                I    ++G    A  +  +M   G  P+   Y++++  LC     +EA  +  +M
Sbjct: 394 -----INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDE 532
            + +  P V  FNA + GLC + R D + +VF+ M ++ +  PN  TY  L++G+A  + 
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508

Query: 533 LELSAEVLKELQLRQVVSESA 553
           +E +  + +E+ +R V   S+
Sbjct: 509 IEEAYGLTREIFMRGVEWSSS 529



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 184/394 (46%), Gaps = 5/394 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++H    AF  +  MV KG  P+V+  + L+  LC + +++ A   +  M+  G  P+  
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           + + LV     +G    A+ L  +M   +G   N V YN+LV+G C  GN+ +++     
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + + G  PN  TY  L+    K   +  A+ + + ++  G  PN+V Y  ++  LC+  +
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS-PTIVTYN 312
            +EA      +  +   P+V ++N  ++ LC  GR + A ++  +M+   R  P IVTYN
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+  LA   + + A  +  E+       S+++YN ++   C+ G   + ++ + +M   
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557

Query: 373 RCKPNEGTYNGLAML-CGVGKVQEAFAIIQ--SLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              P+E T N + +  C  GK + A  ++   S G ++       Y  VI  LCR     
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE 617

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
               LL  M   G  P   T+S LI    ++ ++
Sbjct: 618 DGVILLERMISAGIVPSIATWSVLINCFILDDIV 651



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 16/246 (6%)

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           T +T+ ++I  LA  G+ D    +L +M    F  S   +  +I+     G  +  V   
Sbjct: 75  TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV--- 131

Query: 367 DQMFHR----RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVIT 420
            +MF+R     C P+   YN  L  L G  ++Q  + + + +  +    P  F Y  ++ 
Sbjct: 132 -EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM-KRDGFEPNVFTYNVLLK 189

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +LC+  K   A +LL EM+  G  PD+ +Y+++I  +C  GL++E  E+        ++P
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEP 244

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            V  +NAL+ GLCK      + E+ + M+EKG  PN  +Y+ L+  + +  ++EL+   L
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304

Query: 541 KELQLR 546
            ++  R
Sbjct: 305 TQMLKR 310



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 83/175 (47%)

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G+V     ++Q +  +     ++ +  VI+   + G   +A ++ Y + ++G  P    Y
Sbjct: 90  GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 149

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + ++  L  E  I+    ++  M+   ++P+V  +N LL  LCK+ + D + ++   M  
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
           KG  P+  +YT ++  +     ++   E+ +  +    V  + +  L  ++D++G
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKG 264


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 205/392 (52%), Gaps = 8/392 (2%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+   CK G    A++L+++M+  G   N V + +++RGLC  G ++Q+L    R 
Sbjct: 32  SYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRR- 90

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I +   PN +TYS L++A  K    H A  L+ +++ KG  PN+V+YN L+ G  K  R 
Sbjct: 91  IGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERL 150

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +E +   +++  +G   +V++Y ++L   C     +EA  LL  ++       +VTYN L
Sbjct: 151 DEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALE----KRNVVTYNSL 206

Query: 315 IGSL--AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
             +L  A   +T  AL +L++M++   RP+  +Y  ++  LC   ++D   + L  M+ +
Sbjct: 207 FTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQ 266

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            CK ++ +Y  L +     G+  ++  ++  +         +    VI   C+ G  ++A
Sbjct: 267 GCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEA 326

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            QL   M + G  P + TY++LI   C     + A+++   M + D+KP+V  +N+++  
Sbjct: 327 HQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS 386

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            C+ +R + +  +FQMM++ G  P+  +YT L
Sbjct: 387 FCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 188/407 (46%), Gaps = 41/407 (10%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M S G +P+VV  T ++  LC A K+ +A+ +    +     P+  +Y+ LV+ LCK
Sbjct: 53  LDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-LHFRRIGEDCAPNVYTYSTLVDALCK 111

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A  LV +M   G   N VTYN+L+ G   L  L++ L  L  + Q+G   +  T
Sbjct: 112 SGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVIT 171

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL-CKEG-RTEEAIRFFRD 263
           Y+ +L+   K   +  A +LL+ +     K N+V+YN L T L   EG RT EA+     
Sbjct: 172 YTMILDIFCKNNSIDEAYRLLNAL----EKRNVVTYNSLFTALSTAEGDRTTEALSLLEK 227

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  +G  PN V+Y  +L  LC   R +EA ++L  M         V+Y IL+ + A  G+
Sbjct: 228 MIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGR 287

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
           T  +L++L  M+   +     + N +I + C  G +    +    M+ R   P+  TYN 
Sbjct: 288 TYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNT 347

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L                                  I + C+  +   A +LL++M +  F
Sbjct: 348 L----------------------------------IGAFCKAQQPDTAVKLLHQMIQADF 373

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
            P+  TY+S+I+  C E   EEA  IF +M +    PD  ++  L L
Sbjct: 374 KPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTLKL 420



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 164/345 (47%), Gaps = 8/345 (2%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  +Y  L++   K      A++LLD++ + G +PN+V +  ++ GLC  G+  +A+  F
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           R +  +   PNV +Y+ L+ +LC  G+  EA  L+ EM     SP +VTYN LI      
Sbjct: 89  RRI-GEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D  L +L EM +   R    +Y  I+   C    +D   + L+ +  R    N  TY
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTY 203

Query: 382 NGL--AMLCGVG-KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           N L  A+    G +  EA ++++ +  +     Q  Y+ V+  LC+  +  +A+Q+L  M
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G   D  +Y  L+      G   ++LE+   M    Y  D    N ++   CK+   
Sbjct: 264 YSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDL 323

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             + ++F+ M ++G +P+  TY  L+       + + + ++L ++
Sbjct: 324 HEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 4/311 (1%)

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N VSY +L+ G CK G  ++A+    ++ S G  PNVV +  ++R LC  G+  +A  L 
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQA-LLH 87

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
               G D +P + TY+ L+ +L   G+   A  ++ EMVK    P+  +YN +I      
Sbjct: 88  FRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            ++D V+  L +M  R C+ +  TY   L + C    + EA+ ++ +L  +   +    +
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLF 207

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             + T+     +T +A  LL +M + G  P+   Y +++  LC    ++EA ++ + M  
Sbjct: 208 TALSTA--EGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYS 265

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              K D  ++  L++    + RT  SLE+   M+  G + +  T  +++       +L  
Sbjct: 266 QGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHE 325

Query: 536 SAEVLKELQLR 546
           + ++ K +  R
Sbjct: 326 AHQLFKSMYQR 336



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 108/202 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  +A   LE+M+ +G +P+ V    +L  LCK +++ +A +V+  M S G   D  SY 
Sbjct: 217 RTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYK 276

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV      G    +++L+ +M   GY  +T T N ++   C  G+L+++ Q    + Q+
Sbjct: 277 ILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQR 336

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+  TY+ L+ A  K +    A+KLL  +I    KPN+++YN ++   C+E R EEA
Sbjct: 337 GSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEA 396

Query: 258 IRFFRDLPSKGFEPNVVSYNIL 279
              F+ +   G  P+ VSY  L
Sbjct: 397 RGIFQMMVDNGCFPDRVSYTTL 418



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 4/267 (1%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKA--NKMKKAIKVMEMMVSSGIIPDASSYT 137
           N++  +  R+++   K +VV   +L   L  A  ++  +A+ ++E M+  G  P+  +Y 
Sbjct: 182 NNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYR 241

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LCK   +  A Q++  M   G  T+ V+Y  LV      G    SL+ L R++  
Sbjct: 242 TVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGS 301

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G + +  T + ++    K   +H A +L   +  +G  P+ V+YN L+   CK  + + A
Sbjct: 302 GYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTA 361

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++    +    F+PNV++YN +++S C E R EEA  +   M      P  V+Y  L   
Sbjct: 362 VKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL--K 419

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAA 344
           L+ +    +  KV D  ++  F P  A
Sbjct: 420 LSKNEAAIYDQKVHDTYLRKHFDPQGA 446



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 16/297 (5%)

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R  +   F+R      +  N VSY IL++  C  G +++A ELL EM      P +V + 
Sbjct: 10  RHRDGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHT 69

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +I  L   GK   AL      +     P+  +Y+ ++  LC  G+       + +M  +
Sbjct: 70  TIIRGLCTAGKVSQALLHF-RRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKK 128

Query: 373 RCKPNEGTYNGLAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            C PN  TYN  A++ G  K++   E   +++ +  +   +    Y  ++   C+     
Sbjct: 129 GCSPNVVTYN--ALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSID 186

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCM-EG-LIEEALEIFVVMEEYDYKPDVDNFNA 487
           +A++LL  + K        TY+SL   L   EG    EAL +   M +   +P+  N+  
Sbjct: 187 EAYRLLNALEKRNVV----TYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRT 242

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ----DELELSAEVL 540
           +LL LCK+ R D + +V   M  +G   ++ +Y ILV   A+     D LEL   +L
Sbjct: 243 VLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRML 299



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 5/184 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L++A+  L  M S+G K D V    L+     A +   +++++  M+ SG I D  
Sbjct: 249 KNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTK 308

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   +++  CK G++  A QL + M   G   + VTYN+L+   C     + +++ L ++
Sbjct: 309 TMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQM 368

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           IQ    PN  TY+ ++++  +E+    A  +   ++  G  P+ VSY  L     K  + 
Sbjct: 369 IQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL-----KLSKN 423

Query: 255 EEAI 258
           E AI
Sbjct: 424 EAAI 427



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 4/180 (2%)

Query: 377 NEGTYNGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           NE +Y G+ M   C  G+ Q+A  ++  + +         +  +I  LC  GK  QA  L
Sbjct: 29  NEVSY-GILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-L 86

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
            +        P+ YTYS+L+  LC  G   EA  +   M +    P+V  +NAL+ G  K
Sbjct: 87  HFRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRK 146

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             R D  L + + M ++G   +  TYT++++     + ++ +  +L  L+ R VV+ +++
Sbjct: 147 LERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSL 206


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 230/474 (48%), Gaps = 4/474 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++N+A+   + M   G  P+++    ++  LCKAN++++A ++ E     G  P++ +Y 
Sbjct: 400 RVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYC 459

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L KKG +  A +L EKM D G+  N + Y SL+R   M G      +    +I++
Sbjct: 460 SLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRR 519

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+    +  ++  +K   V     + +D+ + G  P++ SY++L+ GL K G+  E 
Sbjct: 520 GGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARET 579

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F+ +  +GF  +  +YN ++  LC  G+ ++A E+L EM      PT+ TY  ++  
Sbjct: 580 SNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDG 639

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           LA   + D A  + +E        +   Y+ +I      G++D     L++M  +   PN
Sbjct: 640 LAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 699

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T+N L   L    ++ EA    QS+   + S     Y  +I  LCR  K  +AF    
Sbjct: 700 VYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 759

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G  P+  TY+++I GL   G I +A  +F   +     PD  +FNAL+ G+  + 
Sbjct: 760 EMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNAN 819

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA---EVLKELQLRQ 547
           R   + +VF+    +G   N  T   L++ +   + LE +A    VL E+   Q
Sbjct: 820 RPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLSEIAKSQ 873



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 224/452 (49%), Gaps = 2/452 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + +DA+  LER+  +G  P VV   ++L  L K  K+ +A+ + ++M      P+ S+Y 
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAK-PNISTYN 389

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC  G V  A ++ ++ME  G   N ++ N +V  LC    L ++ +  +   ++
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN+ TY  L++   K+  +  A +L + ++  G   N + Y  L+      GR E+ 
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG 509

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + ++++  +G  P++   N  +  +   G  E+   +  +M      P + +Y+ILI  
Sbjct: 510 HKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHG 569

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+      +   M +  F   A +YN ++  LC  GKVD   + L++M  +   P 
Sbjct: 570 LTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPT 629

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  +   L  + ++ EA+ + +   +K        Y  +I    + G+  +A+ +L 
Sbjct: 630 VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILE 689

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G TP+ YT++SL+  L     I+EAL  F  M+E    P+   ++ L+ GLC+ +
Sbjct: 690 EMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQ 749

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           + + +   +Q M ++G +PN  TYT ++ G+A
Sbjct: 750 KYNKAFVFWQEMQKQGLIPNVVTYTTMISGLA 781



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 229/499 (45%), Gaps = 37/499 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M   G+         L+  L ++ +++ A +V+  M      P  S+YT L+  L +
Sbjct: 129 LEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAE 188

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A++L+ +M+D GY  +   + +LVR L   G +  +L  +D +    L P+   
Sbjct: 189 ARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVL 248

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF---- 261
           Y+  ++   K   V  A K   ++ A G +P+ VSY  ++  LCK GR  EA   F    
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME 308

Query: 262 --RDLP-----------------------------SKGFEPNVVSYNILLRSLCMEGRWE 290
             RD+P                              +G  P+VVS+N +L  L  + + +
Sbjct: 309 AERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 368

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           EA  L   M   D  P I TYNI+I  L   G+ + A K+ DEM      P+  S N ++
Sbjct: 369 EALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMV 427

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNS 409
            RLC   +++   +  +    R C PN  TY  L    G  GK+ +A+ + + + +  + 
Sbjct: 428 DRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHD 487

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           +    Y  +I +    G+     ++  EM + G  PD    ++ +  +   G +E+   I
Sbjct: 488 ANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAI 547

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M+ + + PDV +++ L+ GL K+ +   +  +FQ M ++G   +   Y  +V+G+  
Sbjct: 548 FEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCK 607

Query: 530 QDELELSAEVLKELQLRQV 548
             +++ + EVL+E++++ V
Sbjct: 608 SGKVDKAYEVLEEMKVKHV 626



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 4/219 (1%)

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-PNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
           +YN ++  L  +  +  + K L++M H     PN      +A L    ++++AF +I ++
Sbjct: 110 AYNAVLPFLSHD--LAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAM 167

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
            + +   P   Y  +I +L    +  +A +LL +M   G+      +++L+R L  EG +
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           E AL +   ++    +PD+  +N  +    K+   D++ + F  +   G  P++ +YT +
Sbjct: 228 EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSM 287

Query: 524 VEGIAHQDELELSAEVLKELQL-RQVVSESAVERLVMQY 561
           V  +     L  + E+  +++  R V    A   ++M Y
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 68/145 (46%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++++A +  + M      P+    + L+  LC+  K  KA    + M   G+I
Sbjct: 708 DALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLI 767

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT +++ L K GN+  A  L E+ +  G   ++ ++N+L+ G+       ++ Q 
Sbjct: 768 PNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQV 827

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYK 215
            +    +G   N  T   LL+A  K
Sbjct: 828 FEETRLRGCRLNVKTCISLLDALNK 852


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 219/443 (49%), Gaps = 1/443 (0%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LCK  K+++  K++E     G IP+   Y  L++  CKKG++  A  L  +++  G+   
Sbjct: 214 LCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPT 273

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
             TY +++ G C  G+     + L  +  +GL  N   Y+ +++A YK   +  A++ ++
Sbjct: 274 VETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIE 333

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            +I  G KP++V+YN L++G C++G+  EA +       KG  PN  SY  L+ + C +G
Sbjct: 334 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 393

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
            ++ A+  L EM      P +VTY  L+  L   G+ D AL + ++M++    P A  YN
Sbjct: 394 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 453

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNK 406
            +++ LC + K+      L +M  +   P+   Y  L       G + EA  + +    K
Sbjct: 454 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 513

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
             +     Y  +I   C+ G    A   +  M K    PD +TYS++I G   +  ++ A
Sbjct: 514 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 573

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            ++F  M +   KP+V  + +L+ G C+      SL++F+ M   G +PN  TY+IL+  
Sbjct: 574 QKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGS 633

Query: 527 IAHQDELELSAEVLKELQLRQVV 549
              + +L  +A   +E+ + + V
Sbjct: 634 FCKEAKLIDAASFFEEMLMNKCV 656



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 210/464 (45%), Gaps = 25/464 (5%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           N  F++L+    KG  P V     ++   CK    K   +++  M S G+  +   Y  +
Sbjct: 259 NGLFIELKL---KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTI 315

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++   K G++  A++ +E M + G   + VTYN+L+ G C  G ++++ Q L++ + KGL
Sbjct: 316 IDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGL 375

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +PN F+Y+ L+ A  K+ G   A   L ++  +G KP+LV+Y  L+ GL   G  + A+ 
Sbjct: 376 MPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALT 435

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               +  +G  P+   YNIL+  LC + +   A  LLAEM      P    Y  L+    
Sbjct: 436 IREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFI 495

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
            +G  D A K+ +  ++    P    YN +I   C  G +   + C+++M  R   P+E 
Sbjct: 496 RNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEF 555

Query: 380 TY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           TY    +G      +   Q+ F  +  +  K N      Y  +I   CRKG  +++ ++ 
Sbjct: 556 TYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVT---YTSLINGFCRKGDLHRSLKIF 612

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G  P+  TYS LI   C E  + +A   F  M      P+   FN L+ G  K+
Sbjct: 613 REMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKN 672

Query: 496 --------------RRTDLSLEVFQMMIEKGQMPNETTY-TILV 524
                          +  + L  F  MI  G  P    Y +IL+
Sbjct: 673 GTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILI 716



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 209/443 (47%), Gaps = 15/443 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D R++   +  A   +E M+  G KPD+V    L+   C+  K+ +A +++E  +  G++
Sbjct: 317 DARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLM 376

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SYT L++  CK+G    A   + +M + G+  + VTY +LV GL + G ++ +L  
Sbjct: 377 PNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTI 436

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            ++++++G+ P+A  Y+ L+    K+  + AA  LL +++ +   P+   Y  L+ G  +
Sbjct: 437 REKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIR 496

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +EA + F     KG  P +V YN +++  C  G  ++A   +  M     +P   T
Sbjct: 497 NGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFT 556

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ +I         D A K+  EMVK + +P+  +Y  +I   C +G +   +K   +M 
Sbjct: 557 YSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQ 616

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT--------S 421
                PN  TY+ L    C   K+ +A +  + +   +       + Y++         +
Sbjct: 617 ACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRA 676

Query: 422 LCRKGKTYQA------FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           +  KG  +Q             M   G+ P S  Y+S++  LC  G+   AL++   M  
Sbjct: 677 ISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTS 736

Query: 476 YDYKPDVDNFNALLLGLCKSRRT 498
               PD  +F ALL G+C   R+
Sbjct: 737 KGCIPDSVSFVALLHGVCLEGRS 759



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 237/510 (46%), Gaps = 9/510 (1%)

Query: 43  RVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHK--PDVVQ 100
           RV +  +V +         P R+  +     + D  L +  L+L   V K +   PDV+ 
Sbjct: 108 RVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIA 167

Query: 101 ATNLLYDLCKANKMKKAIKVMEMMV----SSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
             +LL  L K  +++ A K+ + M+    +     D  S   +V  LCK+G +    +L+
Sbjct: 168 CNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLI 227

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
           E     G   N + YN+L+ G C  G++  +      L  KG +P   TY  ++    K+
Sbjct: 228 EDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKK 287

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
               A  +LL ++ ++G   N+  YN ++    K G   +A+     +   G +P++V+Y
Sbjct: 288 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 347

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N L+   C +G+  EA++LL +  G    P   +Y  LI +    G  D A   L EM +
Sbjct: 348 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE 407

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQE 395
              +P   +Y  ++  L   G+VD+ +   ++M  R   P+ G YN L + LC   K+  
Sbjct: 408 RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPA 467

Query: 396 AFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           A  ++  + + Q+  P  F Y  ++    R G   +A +L     + G  P    Y+++I
Sbjct: 468 AKLLLAEMLD-QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 526

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           +G C  G++++A+     M++    PD   ++ ++ G  K    D + ++F+ M++    
Sbjct: 527 KGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 586

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
           PN  TYT L+ G   + +L  S ++ +E+Q
Sbjct: 587 PNVVTYTSLINGFCRKGDLHRSLKIFREMQ 616



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/394 (22%), Positives = 173/394 (43%), Gaps = 41/394 (10%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR-F 260
           N F YS LL+   + R       +L+++  +   P   + ++++      G  E+A+  +
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM---DG-GDRSPTIVTYNILIG 316
           +  L +  + P+V++ N LL  L   GR E A +L  EM   DG GDR     +  I++ 
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   GK +   K++++       P+   YN +I   C +G +++      ++  +   P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
              TY  +    C  G  +    ++  + ++  +   + Y  +I +  + G   +A + +
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI-------------------------- 469
             M + G  PD  TY++LI G C +G + EA ++                          
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQ 392

Query: 470 ---------FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
                     + M E  +KPD+  + AL+ GL  +   D++L + + M+E+G  P+   Y
Sbjct: 393 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 452

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            IL+ G+  + +L  +  +L E+  + V+ ++ V
Sbjct: 453 NILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFV 486


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 208/411 (50%), Gaps = 3/411 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  A   L  M ++G + + V  T+++  LC   ++  A++V+E MV  G++ DA+ +T
Sbjct: 300 ELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFT 359

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  C+KG++  A    ++M+  G   + VTY +L+ GLC  G L ++ + L  +  K
Sbjct: 360 TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +A TY+ L++   K   +  A  + + ++ K   PN+V+Y  L  GLCK+G    A
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ SKG E N+ +YN L+  LC  G  E+A   + +MD     P + TY  +IG+
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + D A  +L EM+    +P+  +YN ++   C  G+V+   + L+ M  +   PN
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L    C    ++    I + + +++    +  Y  +I   C+     +A     
Sbjct: 600 TTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHS 659

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM--EEYDYKPDVDNF 485
           EM + GF   + +Y++LIR L  +    EA  +F  M  E    +PDV NF
Sbjct: 660 EMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 222/486 (45%), Gaps = 37/486 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    + M S    PDVV    +++  C  ++++ AIK++  M + G+  +  +YT
Sbjct: 268 RIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC +G V  A+++VE M  +G   +   + +++ G C  G+L  +  + D + ++
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +  TY+ L+    +   +  A ++L ++  KG   + V+Y VL+ G CK G+  EA
Sbjct: 385 GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEA 444

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  K   PNVV+Y  L   LC +G    ANELL EM        I TYN LI  
Sbjct: 445 FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLING 504

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A++ + +M +   +P   +Y  II  LC   ++D     L +M  +  KP 
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  +   C  G+     +LL  
Sbjct: 565 IVTYNVL----------------------------------MNGFCMSGRVEGGKRLLEW 590

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M +    P++ TY+SL++  C+E  ++   EI+  M   +  P+ + +N L+ G CK+R 
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +L     MIEKG     ++Y  L+  +  + +   +  + ++++  ++ +E  V   
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710

Query: 558 VMQYDF 563
            +   F
Sbjct: 711 YIDLSF 716



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 4/396 (1%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  SY  L+  LC  G +  A QL ++M     P + VTY  +V G C L  L  +++ L
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +  +GL  N   Y+ ++     E  V  A+++++D++  G   +   +  +++G C++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G    A  +F ++  +G   + V+Y  L+  LC  G  +EA  +L EM+        VTY
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
            +LI      GK   A  V ++MV+ R  P+  +Y  +   LC +G V    + L +M  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +  + N  TYN L   LC  G +++A   +  +           Y  +I +LC+  +  +
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL EM   G  P   TY+ L+ G CM G +E    +   M E +  P+   +N+L+ 
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             C  +    + E+++ M+ +  +PNE TY IL++G
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 155/308 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L +A   L+ M  KG   D V  T L+   CK  KM +A  V   MV   + P+  
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L + LCK+G+V  A +L+ +M   G   N  TYNSL+ GLC  GNL Q+++ +  +
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL P+ +TY+ ++ A  + + +  A  LL +++ KG KP +V+YNVL+ G C  GR 
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E   R    +  K   PN  +YN L++  C+E   +   E+   M   +  P   TYNIL
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           AL    EM++  FR +A+SYN +I  L  + K     +  ++M   R 
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701

Query: 375 KPNEGTYN 382
                 YN
Sbjct: 702 TAEPDVYN 709



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 185/399 (46%), Gaps = 8/399 (2%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A+QL +++ +     NT +YN L++ LC  G +  + Q  D +      P+  TY  ++ 
Sbjct: 241 AVQLFQELPE----KNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVH 293

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
                  +  A+KLL ++ A+G + N V+Y  ++  LC EG+  +A+R   D+   G   
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL 353

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +   +  ++   C +G    A     EM     +   VTY  LI  L   G+   A +VL
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGV 390
            EM        A +Y  +I   C  GK+       ++M  +R  PN  TY  L+  LC  
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V  A  ++  + +K        Y  +I  LC+ G   QA + + +M + G  PD YTY
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +++I  LC    ++ A  +   M +   KP +  +N L+ G C S R +    + + M+E
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           K   PN TTY  L++    +  ++ + E+ K +  ++VV
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 72/145 (49%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M+ K   P+     +L+   C    MK   ++ + M+S  ++P+ ++Y  L+   CK
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             N+  A+    +M + G+     +YN+L+R L       ++ +  +++ ++ L      
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707

Query: 206 YSFLLEAAYKERGVHAAMKLLDDII 230
           Y+F ++ ++ E  + + + L D+++
Sbjct: 708 YNFYIDLSFNEDNLESTLALCDELV 732


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 216/448 (48%), Gaps = 39/448 (8%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            F   +R    G+K   +    L+  L K N+      + + M+   I P+  ++  ++N
Sbjct: 172 GFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVIN 231

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN---LNQSLQFLDRLIQKG 198
            LCK G +  A  ++E M+ YGY  N V+YN+L+ G C LG    + ++   L  +++  
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENE 291

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + PN  T++ L++  +K+  +  ++K+  +++ +   PN+++YN L+ GLC  G+  EAI
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAI 351

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                + S G +PN+++Y+ L+   C  G  +EA ++   + G    PT   YN+LI + 
Sbjct: 352 GMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAY 411

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK D    + +EM +    P   +YN +IA LC  G ++   K  DQ+         
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL--------- 462

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            T  GL  L     + E +                         C +G++ +A  LL EM
Sbjct: 463 -TNKGLPDLVTFHILMEGY-------------------------CSRGESRKAAMLLKEM 496

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGLCKSRR 497
           +K G  P   TY+ +++G C EG ++ A  +   ME E   + +V ++N LL G  +  +
Sbjct: 497 SKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVE 525
            + +  +   M+EKG +PN  TY I+ E
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIVKE 584



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 189/401 (47%), Gaps = 14/401 (3%)

Query: 167 NTVTYNSLVRGLCMLGNLNQS-----LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           + V  NS++  + +L   N S      +   R    G   +A +   L+ A  K+     
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSAD 206

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
              L  ++I +  +PN+ ++NV++  LCK G+  +A     D+   G+ PNVVSYN L+ 
Sbjct: 207 VEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLID 266

Query: 282 SLCM---EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
             C     G+  +A+ +L EM   + SP + T+NILI           +LKV  EM+   
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQD 326

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
             P+  +YN +I  LC+ GK++  +   D+M     +PN  TY+ L    C  G ++EA 
Sbjct: 327 VIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEAL 386

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +  S+  +        Y  +I + C+ GK    F L  EM + G  PD  TY+ LI GL
Sbjct: 387 DMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G IE A ++F  +      PD+  F+ L+ G C    +  +  + + M + G  P  
Sbjct: 447 CRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRH 505

Query: 518 TTYTILVEGIAHQDELE----LSAEVLKELQLRQVVSESAV 554
            TY I+++G   +  L+    +  ++ KE +LR  V+   V
Sbjct: 506 LTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 180/392 (45%), Gaps = 39/392 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCK---ANKMKKAIKVMEMMVSSGIIPDAS 134
           K+N A   +E M   G+ P+VV    L+   CK     KM KA  V++ MV + + P+ +
Sbjct: 238 KMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLT 297

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++   K  N+  ++++ ++M D     N +TYNSL+ GLC  G +N+++   D++
Sbjct: 298 TFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKM 357

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+ PN  TY  L+    K   +  A+ + D +  +G +P    YN+L+   CK G+ 
Sbjct: 358 VSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKI 417

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++      ++  +G  P+V +YN L+  LC  G  E A +L  ++      P +VT++IL
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHIL 476

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM-FHRR 373
           +      G++  A  +L EM K   +P   +YN ++   C EG +        QM   RR
Sbjct: 477 MEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERR 536

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            + N  +YN L                                  +    +KGK   A  
Sbjct: 537 LRMNVASYNVL----------------------------------LQGYSQKGKLEDANM 562

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           LL EM + G  P+  TY  +   +  +G + +
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 151/290 (52%), Gaps = 2/290 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  L  +    + M+ +   P+V+   +L+  LC   K+ +AI + + MVS+G+ 
Sbjct: 304 DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L+N  CK G +  A+ + + ++  G    T  YN L+   C LG ++     
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + + ++G+VP+  TY+ L+    +   + AA KL D +  K G P+LV++++L+ G C 
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK-GLPDLVTFHILMEGYCS 482

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIV 309
            G + +A    +++   G +P  ++YNI+++  C EG  + A  +  +M+   R    + 
Sbjct: 483 RGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           +YN+L+   +  GK + A  +L+EM++    P+  +Y  +   +  +G V
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFV 592


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 230/497 (46%), Gaps = 36/497 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M+ +   PDV     L+  LC     +K+  +M+ M  SG  P   +Y  +++  CK
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG    A++L++ M+  G   +  TYN L+  LC    + +    L  + ++ + PN  T
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+     E  V  A +LL+++++ G  PN V++N L+ G   EG  +EA++ F  + 
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +KG  P+ VSY +LL  LC    ++ A      M         +TY  +I  L  +G  D
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+ +L+EM K    P   +Y+ +I   C  G+     + + +++     PN   Y+ L 
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT---------------- 428
              C +G ++EA  I +++  + ++     +  ++TSLC+ GK                 
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540

Query: 429 -------------------YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                               +AF +  EMTK G  P  +TY SL++GLC  G + EA + 
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              +       D   +N LL  +CKS     ++ +F  M+++  +P+  TYT L+ G+  
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660

Query: 530 QDELELSAEVLKELQLR 546
           + +  ++    KE + R
Sbjct: 661 KGKTVIAILFAKEAEAR 677



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 212/480 (44%), Gaps = 2/480 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D    +    +A      M +KG  P  V    LL  LCK  +   A      M  +G+ 
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
               +YT +++ LCK G +  A+ L+ +M   G   + VTY++L+ G C +G    + + 
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + R+ + GL PN   YS L+    +   +  A+++ + +I +G   +  ++NVL+T LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA  F R + S G  PN VS++ L+      G   +A  +  EM      PT  T
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 580

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+  L   G    A K L  +           YN ++  +C  G +   V    +M 
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKT 428
            R   P+  TY  L + LC  GK   A    +    + N  P +  Y   +  + + G+ 
Sbjct: 641 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
                   +M   G TPD  T +++I G    G IE+  ++   M   +  P++  +N L
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           L G  K +    S  +++ +I  G +P++ T   LV GI   + LE+  ++LK    R V
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 139/586 (23%), Positives = 250/586 (42%), Gaps = 108/586 (18%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            L +A    E M+ +GH  D      L+  LCKA K+ +A + M  M S GI+P+  S+  
Sbjct: 489  LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 139  LVNC-----------------------------------LCKKGNVGYAMQLVEKMEDYG 163
            L+N                                    LCK G++  A + ++ +    
Sbjct: 549  LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 164  YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
               +TV YN+L+  +C  GNL +++     ++Q+ ++P+++TY+ L+    ++     A+
Sbjct: 609  AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 224  KLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                +  A+G   PN V Y   + G+ K G+ +  I F   + + G  P++V+ N ++  
Sbjct: 669  LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 283  LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG----------------SLAYHGK--- 323
                G+ E+ N+LL EM   +  P + TYNIL+                 S+  +G    
Sbjct: 729  YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788

Query: 324  --TDHAL--------------KVLDEMVKGRFRPSAASYNPIIARLCSEGKV-------- 359
              T H+L              K+L   +         ++N +I++ C+ G++        
Sbjct: 789  KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848

Query: 360  --------------DLVVKCLDQ---------MFHRRCK----PNEGTYNGLAM-LCGVG 391
                          D +V  L++         + H   K    P    Y GL   LC VG
Sbjct: 849  VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908

Query: 392  KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
             ++ AF + + +   +   P      ++ +L + GK  +A  LL  M K    P   +++
Sbjct: 909  DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968

Query: 452  SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            +L+   C  G + EALE+ VVM     K D+ ++N L+ GLC      L+ E+++ M   
Sbjct: 969  TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028

Query: 512  GQMPNETTYTILVEG-IAHQDELELSAEVLKELQLRQVVSESAVER 556
            G + N TTY  L+ G +A +     +  +LK+L  R  ++  ++ +
Sbjct: 1029 GFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 188/411 (45%), Gaps = 1/411 (0%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           + S Y  L+    ++G +  ++++   M  YG+  +  T N+++  +   G       FL
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++++ + P+  T++ L+     E     +  L+  +   G  P +V+YN +L   CK+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR + AI     + SKG + +V +YN+L+  LC   R  +   LL +M      P  VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N LI   +  GK   A ++L+EM+     P+  ++N +I    SEG     +K    M  
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +   P+E +Y  L   LC   +   A      +        +  Y  +I  LC+ G   +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL EM+K G  PD  TYS+LI G C  G  + A EI   +      P+   ++ L+ 
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
             C+      ++ +++ MI +G   +  T+ +LV  +    ++  + E ++
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 219/522 (41%), Gaps = 47/522 (9%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L++A + L  M   G  PD+V  + L+   CK  + K A +++  +   G+ P+   Y+ 
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C+ G +  A+++ E M   G+  +  T+N LV  LC  G + ++ +F+  +   G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++PN  ++  L+           A  + D++   G  P   +Y  LL GLCK G   EA 
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +F + L +     + V YN LL ++C  G   +A  L  EM      P   TY  LI  L
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 319 AYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              GKT  A+    E   +G   P+   Y   +  +   G+    +   +QM +    P+
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718

Query: 378 EGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQ-------------------EFY 415
             T N  AM+ G   +GK+++   ++  +GN QN  P                     F 
Sbjct: 719 IVTTN--AMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFL 775

Query: 416 KY-----------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            Y                 ++  +C         ++L      G   D YT++ LI   C
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G I  A ++  VM       D D  +A++  L ++ R   S  V   M ++G  P   
Sbjct: 836 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQV----VSESAVER 556
            Y  L+ G+    +++ +  V +E+   ++    V+ESA+ R
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 1/360 (0%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           +N   Y+ L+R     G +  SL+    +   G  P+ +T + +L +  K     +    
Sbjct: 121 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           L +++ +   P++ ++N+L+  LC EG  E++    + +   G+ P +V+YN +L   C 
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +GR++ A ELL  M        + TYN+LI  L    +      +L +M K    P+  +
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
           YN +I    +EGKV +  + L++M      PN  T+N L       G  +EA  +   + 
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K  +  +  Y  ++  LC+  +   A      M + G      TY+ +I GLC  G ++
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+ +   M +    PD+  ++AL+ G CK  R   + E+   +   G  PN   Y+ L+
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 104/206 (50%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            ++N AF  ++ M S G   D      ++  L + ++ +++  V+  M   GI P++  Y 
Sbjct: 839  EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+N LC+ G++  A  + E+M  +      V  +++VR L   G  +++   L  +++ 
Sbjct: 899  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             LVP   +++ L+    K   V  A++L   +   G K +LVSYNVL+TGLC +G    A
Sbjct: 959  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1018

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSL 283
               + ++   GF  N  +Y  L+R L
Sbjct: 1019 FELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 1/179 (0%)

Query: 371 HRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +R C  N   Y+ L  +    G +Q++  I + +G    +        ++ S+ + G+  
Sbjct: 116 YRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 175

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             +  L EM K    PD  T++ LI  LC EG  E++  +   ME+  Y P +  +N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
              CK  R   ++E+   M  KG   +  TY +L+  +   + +     +L++++ R +
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 208/411 (50%), Gaps = 3/411 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  A   L  M ++G + + V  T+++  LC   ++  A++V+E MV  G++ DA+ +T
Sbjct: 300 ELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFT 359

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  C+KG++  A    ++M+  G   + VTY +L+ GLC  G L ++ + L  +  K
Sbjct: 360 TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +A TY+ L++   K   +  A  + + ++ K   PN+V+Y  L  GLCK+G    A
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ SKG E N+ +YN L+  LC  G  E+A   + +MD     P + TY  +IG+
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + D A  +L EM+    +P+  +YN ++   C  G+V+   + L+ M  +   PN
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L    C    ++    I + + +++    +  Y  +I   C+     +A     
Sbjct: 600 TTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHS 659

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM--EEYDYKPDVDNF 485
           EM + GF   + +Y++LIR L  +    EA  +F  M  E    +PDV NF
Sbjct: 660 EMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 222/486 (45%), Gaps = 37/486 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    + M S    PDVV    +++  C  ++++ AIK++  M + G+  +  +YT
Sbjct: 268 RIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC +G V  A+++VE M  +G   +   + +++ G C  G+L  +  + D + ++
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +  TY+ L+    +   +  A ++L ++  KG   + V+Y VL+ G CK G+  EA
Sbjct: 385 GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEA 444

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  K   PNVV+Y  L   LC +G    ANELL EM        I TYN LI  
Sbjct: 445 FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLING 504

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A++ + +M +   +P   +Y  II  LC   ++D     L +M  +  KP 
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  +   C  G+     +LL  
Sbjct: 565 IVTYNVL----------------------------------MNGFCMSGRVEGGKRLLEW 590

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M +    P++ TY+SL++  C+E  ++   EI+  M   +  P+ + +N L+ G CK+R 
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +L     MIEKG     ++Y  L+  +  + +   +  + ++++  ++ +E  V   
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710

Query: 558 VMQYDF 563
            +   F
Sbjct: 711 YIDLSF 716



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 4/396 (1%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  SY  L+  LC  G +  A QL ++M     P + VTY  +V G C L  L  +++ L
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +  +GL  N   Y+ ++     E  V  A+++++D++  G   +   +  +++G C++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G    A  +F ++  +G   + V+Y  L+  LC  G  +EA  +L EM+        VTY
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
            +LI      GK   A  V ++MV+ R  P+  +Y  +   LC +G V    + L +M  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +  + N  TYN L   LC  G +++A   +  +           Y  +I +LC+  +  +
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL EM   G  P   TY+ L+ G CM G +E    +   M E +  P+   +N+L+ 
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             C  +    + E+++ M+ +  +PNE TY IL++G
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 155/308 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L +A   L+ M  KG   D V  T L+   CK  KM +A  V   MV   + P+  
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L + LCK+G+V  A +L+ +M   G   N  TYNSL+ GLC  GNL Q+++ +  +
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL P+ +TY+ ++ A  + + +  A  LL +++ KG KP +V+YNVL+ G C  GR 
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E   R    +  K   PN  +YN L++  C+E   +   E+   M   +  P   TYNIL
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           AL    EM++  FR +A+SYN +I  L  + K     +  ++M   R 
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701

Query: 375 KPNEGTYN 382
                 YN
Sbjct: 702 TAEPDVYN 709



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 185/399 (46%), Gaps = 8/399 (2%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A+QL +++ +     NT +YN L++ LC  G +  + Q  D +      P+  TY  ++ 
Sbjct: 241 AVQLFQELPE----KNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVH 293

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
                  +  A+KLL ++ A+G + N V+Y  ++  LC EG+  +A+R   D+   G   
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL 353

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +   +  ++   C +G    A     EM     +   VTY  LI  L   G+   A +VL
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGV 390
            EM        A +Y  +I   C  GK+       ++M  +R  PN  TY  L+  LC  
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V  A  ++  + +K        Y  +I  LC+ G   QA + + +M + G  PD YTY
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +++I  LC    ++ A  +   M +   KP +  +N L+ G C S R +    + + M+E
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           K   PN TTY  L++    +  ++ + E+ K +  ++VV
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 72/145 (49%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M+ K   P+     +L+   C    MK   ++ + M+S  ++P+ ++Y  L+   CK
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             N+  A+    +M + G+     +YN+L+R L       ++ +  +++ ++ L      
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707

Query: 206 YSFLLEAAYKERGVHAAMKLLDDII 230
           Y+F ++ ++ E  + + + L D+++
Sbjct: 708 YNFYIDLSFNEDNLESTLALCDELV 732


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 234/499 (46%), Gaps = 4/499 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GI 129
           D   R H+   A     +++  G + D + A++LL   C+A +  +A+ ++       G 
Sbjct: 121 DCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGC 180

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--PTNTVTYNSLVRGLCMLGNLNQS 187
           +PD  SY  L+  LC +G  G A  L+  M + G     + V YN+++ G    G++N++
Sbjct: 181 VPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKA 240

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                 ++Q+G+ P+  TYS ++ A  K R +  A   L  ++ KG  P+  +YN L+ G
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               G+ +EA+R F+++  +   P+VV+ N L+ SLC  G+ +EA ++   M    ++P 
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +Y I++   A  G       + D M+     P   ++N +I    + G +D  +   +
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 420

Query: 368 QMFHRRCKPNEGTY-NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M     KP+  TY   +A LC +GK+ +A      + ++     +  Y  +I   C  G
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              +A +L+ E+   G   D   + S+I  LC  G + +A  IF +       PD   +N
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            L+ G C   + + +L VF  M+  G  PN   Y  LV G      ++    + +E+  +
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600

Query: 547 QVVSESAVERLVMQYDFEG 565
            +   + +  +++   FE 
Sbjct: 601 GIKPSTILYNIIIDGLFEA 619



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 225/465 (48%), Gaps = 3/465 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AFL+  +MV+KG  PD     NL+Y      + K+A++V + M    I+PD  +   L+
Sbjct: 276 EAFLR--QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCK G +  A  + + M   G   +  +Y  ++ G    G L       D ++  G+ 
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ +T++ L++A      +  AM + +++   G KP++V+Y  ++  LC+ G+ ++A+  
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +  +G  P+  +Y+ L++  C  G   +A EL++E+        IV +  +I +L  
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+   A  + D  V     P A  YN ++   C  GK++  ++  D M     +PN   
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  L    C +G++ E  ++ + +  K        Y  +I  L   G+T  A    +EMT
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G   +  TYS ++RGL      +EA+ +F  +   + K D+   N ++ G+ ++RR +
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 693

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + ++F  +   G +P   TY+I++  +  +  +E + ++   +Q
Sbjct: 694 EAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQ 738



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 194/420 (46%), Gaps = 5/420 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    + M  KG  PDV   T +L        +     + ++M+  GI PD  ++ 
Sbjct: 341 KIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFN 400

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+      G +  AM +  +M D+G   + VTY +++  LC +G ++ +++  +++I +
Sbjct: 401 VLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+VP+ + Y  L++       +  A +L+ +I+  G + ++V +  ++  LCK GR  +A
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F    + G  P+ V YN+L+   C+ G+ E+A  +   M      P +V Y  L+  
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D  L +  EM++   +PS   YN II  L   G+         +M       N
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 640

Query: 378 EGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           + TY+   +L G+ K     EA  + + L              +I  + +  +  +A  L
Sbjct: 641 KCTYS--IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              +++ G  P + TYS +I  L  EGL+EEA ++F  M+    +PD    N ++  L K
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 172/384 (44%), Gaps = 39/384 (10%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P ++TY+ L++   +      A+     ++  G + + +  + LL G C+  RT+EA+
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 259 R-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILI 315
                  P  G  P+V SYNILL+SLC +G+  +A++LL  M  G    SP +V YN +I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  + A  +  EMV+    P   +Y+ ++  LC    +D     L QM ++   
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 376 PNEGTYNGL------------------------------------AMLCGVGKVQEAFAI 399
           P+  TYN L                                      LC  GK++EA  +
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
             ++  K  +     Y  ++     KG       L   M   G  PD YT++ LI+    
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G++++A+ IF  M ++  KP V  +  ++  LC+  + D ++E F  MI++G +P++  
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
           Y  L++G      L  + E++ E+
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEI 492



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 200/470 (42%), Gaps = 45/470 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
           P + +Y  L++C  +      A+    ++   G   + +  + L++G C     +++L  
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAA------------------------------------ 213
            L R  + G VP+ F+Y+ LL++                                     
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 214 -YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
            +KE  V+ A  L  +++ +G  P+LV+Y+ ++  LCK    ++A  F R + +KG  P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             +YN L+      G+W+EA  +  EM      P +V  N L+GSL  +GK   A  V D
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVG 391
            M      P   SY  ++    ++G +  +    D M      P+  T+N L       G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            + +A  I   + +         Y  VI +LCR GK   A +   +M   G  PD Y Y 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            LI+G C  G + +A E+   +     + D+  F +++  LCK  R   +  +F + +  
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           G  P+   Y +L++G     ++E      K L++   +  + +E  V+ Y
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKME------KALRVFDAMVSAGIEPNVVGY 574



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 140/275 (50%), Gaps = 2/275 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  +++ G + D+V   +++ +LCK  ++  A  + ++ V+ G+ PDA  Y  L++  C 
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 548

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A+++ + M   G   N V Y +LV G C +G +++ L     ++QKG+ P+   
Sbjct: 549 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 608

Query: 206 YSFLLEAAYKE-RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           Y+ +++  ++  R V A +K   ++   G   N  +Y+++L GL K    +EAI  F++L
Sbjct: 609 YNIIIDGLFEAGRTVPAKVK-FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            +   + ++++ N ++  +    R EEA +L A +      P  VTY+I+I +L   G  
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLV 727

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           + A  +   M      P +   N ++  L  + ++
Sbjct: 728 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 228/476 (47%), Gaps = 7/476 (1%)

Query: 74  HRDHKLNDAFLQLERMV--SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
            +  +  +A   L +MV  ++G  PDVV   + +       + K+A+ ++E MV+ G+ P
Sbjct: 156 SKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPP 215

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  +Y   +    K      AM L+E++ + G+P +T TYN ++      G   +++  L
Sbjct: 216 NLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLL 275

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
            +++   +  +  +YS ++ A  + R    AM LL+ +  +G  PN++SYN  +    K 
Sbjct: 276 GQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKG 335

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            R +EA+   R++ + G  P V+SYN    +  + GRW EA ELL EM     +P  ++Y
Sbjct: 336 DRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISY 395

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG-KVDLVVKCLDQMF 370
           N  + + A  G+ + A+K+L  M      P   S+N  I   C  G + +  V+ L +M 
Sbjct: 396 NSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAI-DACGRGQQWETAVELLREMP 454

Query: 371 HRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                PN  TYN     CG   + QEA  + + +  +  S     Y  +I + C KG+ +
Sbjct: 455 TAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDA-CAKGEQW 513

Query: 430 Q-AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
           + A QLL  M   G  PD  +Y+S I         E AL++   M     KPD+ ++N+ 
Sbjct: 514 ELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSA 573

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +    KS R   +L + + M   G  PN  +Y   +      ++ +++  +LKE+Q
Sbjct: 574 VTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQ 629



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/488 (23%), Positives = 224/488 (45%), Gaps = 2/488 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  +A   LE+MV++G  P+++   + +    K  + ++A+ ++E ++  G  P   +Y 
Sbjct: 197 RWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYN 256

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++   K G    AM L+ +M     P + ++Y+S++          +++  L+++  +
Sbjct: 257 PVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQ 316

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  +Y+  ++A  K      A+ LL ++   G  P ++SYN         GR  EA
Sbjct: 317 GVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEA 376

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   +++P++G  PN +SYN  L +    G+WE+A +LL  M      P I+++N  I +
Sbjct: 377 LELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDA 436

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                + + A+++L EM      P+  +YN  I       +    +    +M  R   PN
Sbjct: 437 CGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPN 496

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ-AFQLLY 436
             TYN +   C  G+  E    + +    +  +P           C KG+ ++ A QLL 
Sbjct: 497 VVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLK 556

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M   G  PD  +Y+S +      G   EAL +   M      P+  ++ A +    K  
Sbjct: 557 GMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGE 616

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           + D+++ + + M   G  PN  TY+  ++  A Q   + + ++L +L+ RQ ++  A   
Sbjct: 617 QWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLR-RQGLTPDAQTY 675

Query: 557 LVMQYDFE 564
           L +   F+
Sbjct: 676 LTVISAFQ 683



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 215/454 (47%), Gaps = 7/454 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLC-KANKMKKAIKVMEMMVSSGIIPDA 133
           +  +  +A   LE ++ +G  P   +  N + D C K  +  +A+ ++  M+++ I  D 
Sbjct: 229 KGRRWEEAMDLLEEVIEQGFPPST-RTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADV 287

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            SY+ ++    +      AM L+E+M   G   N ++YNS +          ++L  L  
Sbjct: 288 ISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLRE 347

Query: 194 LIQKGLVPNAFTYSFLLEA-AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           +   GLVP   +Y+    A A   R V  A++LL ++ A+G  PN +SYN  L    K G
Sbjct: 348 MTTVGLVPTVISYNSATAACAVNGRWVE-ALELLKEMPAQGIAPNTISYNSALDACAKGG 406

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + E+A++  R + + G +P+++S+N  + +     +WE A ELL EM     +P ++TYN
Sbjct: 407 QWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYN 466

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG-KVDLVVKCLDQMFH 371
             I +     +   A+ +  EM      P+  +YN +I   C++G + +L V+ L  M  
Sbjct: 467 SAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMI-DACAKGEQWELAVQLLTGMPA 525

Query: 372 RRCKPNEGTYNGLAMLCGVGKVQE-AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R   P+  +YN     CG G+  E A  +++ +  +        Y   +T+  + G+  +
Sbjct: 526 RGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWRE 585

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL +M   G TP++ +Y + I         + A+ I   M+ +   P++  ++A + 
Sbjct: 586 ALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAID 645

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
              K  R   ++++   +  +G  P+  TY  ++
Sbjct: 646 ACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVI 679



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 219/468 (46%), Gaps = 9/468 (1%)

Query: 90  VSKGHKP-DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
            S+G KP  +V+  ++L +  K    + A+  ++    SG   D +SY   +        
Sbjct: 67  ASRGGKPKSLVKLKSILLE-AKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQ 125

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ--KGLVPNAFTY 206
              A++L+ +M   G   + VTYNS +      G   +++  L +++   +G+ P+  TY
Sbjct: 126 WATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTY 185

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  + A         AM LL+ ++A+G  PNL++YN  +    K  R EEA+    ++  
Sbjct: 186 NSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIE 245

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +GF P+  +YN ++ +    GRW EA +LL +M   D    +++Y+ +I +     +   
Sbjct: 246 QGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKE 305

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEG-KVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           A+ +L++M      P+  SYN  I   C++G +    +  L +M      P   +YN   
Sbjct: 306 AMDLLEQMRTQGVSPNVISYNSAI-DACAKGDRWKEALDLLREMTTVGLVPTVISYNSAT 364

Query: 386 MLCGV-GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
             C V G+  EA  +++ +   Q  +P    Y   + +  + G+  +A +LL  M+  G 
Sbjct: 365 AACAVNGRWVEALELLKEM-PAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGS 423

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD  +++S I         E A+E+   M      P+V  +N+ +    +S R   ++ 
Sbjct: 424 DPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMG 483

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +F+ M  +G  PN  TY  +++  A  ++ EL+ ++L  +  R V  +
Sbjct: 484 LFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPD 531



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 171/386 (44%), Gaps = 38/386 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKAN-KMKKAIKVMEMMVSSGI 129
           D   +  +  +A   L  M + G  P V+ + N     C  N +  +A+++++ M + GI
Sbjct: 330 DACAKGDRWKEALDLLREMTTVGLVPTVI-SYNSATAACAVNGRWVEALELLKEMPAQGI 388

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  SY   ++   K G    A++L+  M   G   + +++NS +           +++
Sbjct: 389 APNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVE 448

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L  +   GL PN  TY+  +EA  +      AM L  ++  +G  PN+V+YN ++    
Sbjct: 449 LLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACA 508

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K  + E A++    +P++G  P+V+SYN  + +     +WE A +LL  M      P I+
Sbjct: 509 KGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDII 568

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG-KVDLVVKCLDQ 368
           +YN  + + A  G+   AL +L +M      P+  SY   I   C +G + D+ V+ L +
Sbjct: 569 SYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAI-HACGKGEQWDVAVRILKE 627

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           M      PN  TY+                                    I +  ++G+ 
Sbjct: 628 MQTHGATPNLITYSA----------------------------------AIDACAKQGRW 653

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLI 454
            +A  LL ++ + G TPD+ TY ++I
Sbjct: 654 KEAVDLLTDLRRQGLTPDAQTYLTVI 679



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 37/284 (13%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLC-KANKMKKAIKVMEMMVSSGI 129
           D   +  +   A   L  M + G  PD++ + N   D C +  + + A++++  M ++G+
Sbjct: 400 DACAKGGQWEKAVKLLRGMSTVGSDPDII-SFNSAIDACGRGQQWETAVELLREMPTAGL 458

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  +Y   +    +      AM L  +M   G   N VTYNS++           ++Q
Sbjct: 459 TPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQ 518

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L  +  +G+ P+  +Y+  +EA  K      A++LL  +  +G KP+++SYN  +T   
Sbjct: 519 LLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACA 578

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSY-------------NILLRSL------------- 283
           K GR  EA+   +D+ + G  PN VSY             ++ +R L             
Sbjct: 579 KSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLI 638

Query: 284 ---------CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                      +GRW+EA +LL ++     +P   TY  +I + 
Sbjct: 639 TYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAF 682


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 224/462 (48%), Gaps = 4/462 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L  M+ +G   +V     LL  LC+  +  KA+ ++  M  + ++PD  SY  ++ 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C+   +  A++L  +M+  G   + VT+  L+   C  G +++++ FL  +   GL  
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +   Y+ L+        +     L D+++ +G  P  ++YN L+ G CK G+ +EA   F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G  PNV +Y  L+  LC  G+ +EA + L  M   D  P  VTYNI+I  L   
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKD 365

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR--CKPNEG 379
           G    A+++++ M K R RP   +YN ++  LC++G +D   K L  M        P+  
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           +YN L   LC   ++ +A  I   L  K  +  +     ++ S  + G   +A +L  ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
           +      +S TY+++I G C  G++  A  +   M   + +P V ++N LL  LCK    
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D +  +F+ M      P+  ++ I+++G     +++ SAE L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK-SAESL 586



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 218/453 (48%), Gaps = 3/453 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +   A   L  M      PDV     ++   C+  +++KA+++   M  SG      
Sbjct: 154 RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++  CK G +  AM  +++M+  G   + V Y SL+RG C  G L++     D +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G  P A TY+ L+    K   +  A ++ + +I +G +PN+ +Y  L+ GLC  G+T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA++    +  K  EPN V+YNI++  LC +G   +A E++  M      P  +TYNIL
Sbjct: 334 KEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393

Query: 315 IGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +G L   G  D A K+L  M+K      P   SYN +I  LC E ++   +   D +  +
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
               +  T N L       G V +A  + + + + +     + Y  +I   C+ G    A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             LL +M      P  + Y+ L+  LC EG +++A  +F  M+  +  PDV +FN ++ G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
             K+     +  +   M   G  P+  TY+ L+
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 228/452 (50%), Gaps = 5/452 (1%)

Query: 101 ATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
            +NL+  L ++   + A      M+ +    +  S + L+ C  +    G+A  ++  M 
Sbjct: 75  GSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALML 134

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
             G+  N   +N L++GLC      +++  L  + +  L+P+ F+Y+ ++    + + + 
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A++L +++   G   +LV++ +L+   CK G+ +EA+ F +++   G E ++V Y  L+
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254

Query: 281 RSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           R  C  G  +    L  E ++ GD SP  +TYN LI      G+   A ++ + M++   
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGD-SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
           RP+  +Y  +I  LC  GK    ++ L+ M  +  +PN  TYN +   LC  G V +A  
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK-YGFT-PDSYTYSSLIRG 456
           I++ +  ++       Y  ++  LC KG   +A +LLY M K   +T PD  +Y++LI G
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           LC E  + +AL+I+ ++ E     D    N LL    K+   + ++E+++ + +   + N
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             TYT +++G      L ++  +L ++++ ++
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 208/437 (47%), Gaps = 52/437 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A   L+ M   G + D+V  T+L+   C   ++ +   + + ++  G  P A +Y 
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK G +  A ++ E M + G   N  TY  L+ GLC +G   ++LQ L+ +I+K
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEK 346

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PNA TY+ ++    K+  V  A+++++ +  +  +P+ ++YN+LL GLC +G  +EA
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406

Query: 258 IRFFRDL--PSKGFEPNVVSYNILLRSLCMEGRWEEA----NELLAEMDGGDRSPTIVTY 311
            +    +   S   +P+V+SYN L+  LC E R  +A    + L+ ++  GDR    VT 
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR----VTT 462

Query: 312 NILIGSLAYHGKTDHALKVLDE---------------MVKG------------------- 337
           NIL+ S    G  + A+++  +               M+ G                   
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 338 -RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKV 393
              +PS   YN +++ LC EG +D   +  ++M      P+  ++N   M+ G    G +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN--IMIDGSLKAGDI 580

Query: 394 QEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + A +++  + ++   SP  F Y  +I    + G   +A     +M   GF PD++   S
Sbjct: 581 KSAESLLVGM-SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639

Query: 453 LIRGLCMEGLIEEALEI 469
           +++    +G  ++  E+
Sbjct: 640 VLKYCISQGETDKLTEL 656



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 165/365 (45%), Gaps = 3/365 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  +A   L  M+ K  +P+ V    ++  LCK   +  A++++E+M      PD  +Y 
Sbjct: 332 KTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391

Query: 138 YLVNCLCKKGNVGYAMQLVEKM-EDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            L+  LC KG++  A +L+  M +D  Y   + ++YN+L+ GLC    L+Q+L   D L+
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +K    +  T + LL +  K   V+ AM+L   I       N  +Y  ++ G CK G   
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A      +     +P+V  YN LL SLC EG  ++A  L  EM   +  P +V++NI+I
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G    A  +L  M +    P   +Y+ +I R    G +D  +   D+M     +
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631

Query: 376 PNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+    + +   C   G+  +   +++ L +K     +E    V+  +C         + 
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKR 691

Query: 435 LYEMT 439
           L  +T
Sbjct: 692 LLRVT 696



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 191/453 (42%), Gaps = 76/453 (16%)

Query: 175 VRGLCMLGN--LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           +R LC   N  L  ++    + +  G    AF  S L+    + R    A      ++  
Sbjct: 43  LRSLCEDSNPQLKNAVSVFQQAVDSG-SSLAFAGSNLMAKLVRSRNHELAFSFYRKMLET 101

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC-------- 284
               N VS + LL    +  +T  A      +  +GF  NV ++NILL+ LC        
Sbjct: 102 DTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKA 161

Query: 285 --------------------------MEGR-WEEANELLAEMDGGDRSPTIVTYNILIGS 317
                                      EG+  E+A EL  EM G   S ++VT+ ILI +
Sbjct: 162 VSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA 221

Query: 318 LAYHGKTDHALKVLDEMV---------------------------KGRF--------RPS 342
               GK D A+  L EM                            K  F         P 
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
           A +YN +I   C  G++    +  + M  R  +PN  TY GL   LCGVGK +EA   + 
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLN 341

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  K        Y  +I  LC+ G    A +++  M K    PD+ TY+ L+ GLC +G
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401

Query: 462 LIEEALE-IFVVMEEYDY-KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            ++EA + +++++++  Y  PDV ++NAL+ GLCK  R   +L+++ +++EK    +  T
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             IL+       ++  + E+ K++   ++V  S
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 62/126 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A+   E M    + PDVV    ++    KA  +K A  ++  M  +G+ PD  
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+N   K G +  A+   +KM D G+  +    +S+++     G  ++  + + +L
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660

Query: 195 IQKGLV 200
           + K +V
Sbjct: 661 VDKDIV 666


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 222/468 (47%), Gaps = 2/468 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A    + +++ G K  VV AT L++  C   +++KA+ + E  +  G++P   +YT
Sbjct: 262 RMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYT 321

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+    ++G    A +L  +M D+G   +T  +N +++GL        ++     +   
Sbjct: 322 VLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADS 381

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+AFTY+ L+    + R +  A+ L + +   G KP +V+Y+ LL   C  G  +EA
Sbjct: 382 G-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEA 440

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ + ++P KGF PNVV+Y  L++    +  +++A  LLAEM     S    TYN LI  
Sbjct: 441 VKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLING 500

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+     ++L       F P+A +YN II      G +        QM  +   PN
Sbjct: 501 LCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPN 560

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +   C       A  ++  +  K        Y  +I   C++G    A Q+L 
Sbjct: 561 IVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLV 620

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M K G  P+   Y+S I G     ++EEAL ++  M +     D   +  L+ G  K  
Sbjct: 621 LMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDG 680

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               +L+++  M+ KG +P+  T+T L  G+    +++ + ++L E+ 
Sbjct: 681 NVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMN 728



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 208/446 (46%), Gaps = 6/446 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+    +M   G  P   +   ++  L      K A+ + + M  SGI PDA +Y  L++
Sbjct: 336 AYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIH 394

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LC++  +  A+ L EKM + G     VTY+SL+   C+ G ++++++    +  KG  P
Sbjct: 395 WLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTP 454

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L++    +     A  LL ++   G   N  +YN L+ GLC  GR  E     
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML 514

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +   ++GF P  ++YN ++      G    A  +  +M      P IVTY   I      
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
              D ALK+L+++     RP  A+YN +I   C EG +   ++ L  M      PN   Y
Sbjct: 575 SCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634

Query: 382 NGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           N  + + G   +  ++EA  + + +  +        Y  +I    + G    A +L  EM
Sbjct: 635 N--SFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  PD  T+++L  GLC  G I++A ++   M   D +P+V  +N L+ G  ++ + 
Sbjct: 693 VAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKL 752

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILV 524
             +  +   M+E+  MP++TTY ILV
Sbjct: 753 QEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 208/455 (45%), Gaps = 6/455 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  KG   D      ++    K      A+++ + M +S I PD    +  +  LCK  +
Sbjct: 168 MRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ ++ KM+D G+     T+NS+V  L   G + ++L   D L+  G   +    + 
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+     +R V  A+ + ++ +  G  P  V+Y VL+ G  +EG  E+A    R +   G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHA 327
             P+   +N++++ L  +  W++A  L  EM D G   P   TYNILI  L    K   A
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG--IPDAFTYNILIHWLCQRRKIREA 405

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           L + ++M +   +P   +Y+ ++   C  G +D  VK   +M  +   PN  TY  L M 
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL-MK 464

Query: 388 CGVGKV--QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             + K    +A+A++  +     S     Y  +I  LC  G+  +  ++L      GF P
Sbjct: 465 GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVP 524

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
            + TY+S+I G    G++  A  ++  M      P++  + + + G CK+   DL+L++ 
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKML 584

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             +  KG  P+   Y  L+ G   +  +  + +VL
Sbjct: 585 NDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVL 619



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 176/380 (46%), Gaps = 3/380 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            K+ +A    E+M   G KP +V   +LL   C    M +A+K+   M   G  P+  +Y
Sbjct: 400 RKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTY 459

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+     K     A  L+ +M+  G   N  TYN+L+ GLC++G + +  + L R   
Sbjct: 460 TTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET 519

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G VP A TY+ ++    K   + +A  +   + AKG  PN+V+Y   + G CK    + 
Sbjct: 520 EGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDL 579

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++   D+  KG  P++ +YN L+   C EG    A ++L  M      P I  YN  I 
Sbjct: 580 ALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFIT 639

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                   + AL++ ++M+K       A+Y  +I     +G V   +K   +M  +   P
Sbjct: 640 GYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIP 699

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQL 434
           +  T+  L   LC  G + +A  ++  + N+ +  P    Y  +I    R GK  +AF+L
Sbjct: 700 DHITFTALTHGLCRNGDIDDARKLLDEM-NRLDIRPNVLMYNMLINGYLRNGKLQEAFRL 758

Query: 435 LYEMTKYGFTPDSYTYSSLI 454
             EM +    PD  TY  L+
Sbjct: 759 HDEMLERKIMPDDTTYDILV 778



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 148/313 (47%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            + A+  L  M   G   +      L+  LC   ++ +  ++++   + G +P A +Y  
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N   K G +G A  + ++M   G P N VTY S + G C     + +L+ L+ +  KG
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+   Y+ L+    +E  +  A+++L  ++  G  PN+  YN  +TG       EEA+
Sbjct: 592 LRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R +  +  +G + +  +Y  L+     +G    A +L +EM      P  +T+  L   L
Sbjct: 652 RLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +G  D A K+LDEM +   RP+   YN +I      GK+    +  D+M  R+  P++
Sbjct: 712 CRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDD 771

Query: 379 GTYNGLAMLCGVG 391
            TY+ L  +  +G
Sbjct: 772 TTYDILVGMKSLG 784



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 206/478 (43%), Gaps = 36/478 (7%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M + G+ PDA S T L+    +  +   A+ L+ +M   G P +   ++ ++R     G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            + +++  D +    + P+    S  + +  K R  + A+ +L  +   G  P   ++N 
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++  L K GR EEA+    +L + G + +VV    L+   C++    +A ++  E     
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEM---------------VKGRFR-------- 340
             PT VTY +LI      G  + A ++  +M               +KG           
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 341 -----------PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML-C 388
                      P A +YN +I  LC   K+   +   ++M     KP   TY+ L +  C
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             G + EA  +   +  K  +     Y  ++     K    +A+ LL EM + G + + Y
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY++LI GLC+ G + E  E+    E   + P    +N+++ G  K+     +  V+Q M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE-SAVERLVMQYDFEG 565
             KG  PN  TYT  ++G       +L+ ++L +++ + +  + +A   L+  +  EG
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEG 610


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 237/534 (44%), Gaps = 53/534 (9%)

Query: 58  VYTKPNRKPGNNNDTRHRDHKLNDAFLQ--LERMVSKGHKPDVVQATNLLYDLCKANKMK 115
           V+    R+ G  +D R   H    + LQ  +E   ++G     ++A       CK  +  
Sbjct: 187 VWEGAGRRGGRPDDER-SGHGSQHSVLQRAVEGSAARGRHGSALEA------YCKVREFD 239

Query: 116 KAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
            A KV+  M   G   +  +Y  L+  LC+ G V  A    + MEDYG   +  TY +L+
Sbjct: 240 TAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 299

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
            GLC     N++   LD +    L PN   Y+ L++   +E     A K++ +++A G +
Sbjct: 300 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 359

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           PN ++Y+ L+ GLCK G+ + A    + +      P+ ++YN+++         ++A  L
Sbjct: 360 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRL 419

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L+EM+    SP + TY+I+I  L   G+ + A  +L+EM     +P+A  Y P+I+  C 
Sbjct: 420 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 479

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA---FAIIQSLGNKQNSSP 411
           EG V L  +  D+M      P+   YN L   L  VG+V+E+   FA +Q  G      P
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG----LLP 535

Query: 412 QEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP------------------------- 445
            EF Y  +I    + G    A QL+  M   G  P                         
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 595

Query: 446 ----------DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
                     D+  Y  LI  L   G +E A  +   +E+    PDV  +++L+ GLCK+
Sbjct: 596 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 655

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
              + +  +   M +KG  PN   Y  L++G+    ++  +  V   +  + +V
Sbjct: 656 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 709



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 222/484 (45%), Gaps = 39/484 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R H   DAF  L  M + G  P+V   + +++ LC++ + +KA  ++E M + G+ P+A 
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++  C++GNV  A ++ +KM       +   YNSL+ GL  +G + +S ++  ++
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++GL+PN FTYS L+    K   + +A +L+  ++  G KPN V Y  LL    K    
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+    F+ +  +G   +   Y IL+ +L   G  E A  +L+ ++     P +  Y+ L
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L      + A  +LDEM K    P+   YN +I  LC  G +       + +  +  
Sbjct: 649 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 708

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            PN  TY  L                                  I   C+ G    AF L
Sbjct: 709 VPNCVTYTSL----------------------------------IDGSCKVGDISNAFYL 734

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY-DYKPDVDNFNALLLGLC 493
             EM   G TPD++ YS L  G    G +E+A+  F++ E +      + +FN L+ G C
Sbjct: 735 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM--FLIEEMFLRGHASISSFNNLVDGFC 792

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K  +   +L++  +++ +G +PN  T   ++ G++   +L     +  ELQ  Q  SESA
Sbjct: 793 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ--QKTSESA 850

Query: 554 VERL 557
               
Sbjct: 851 ARHF 854



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+++L  +  M+ A +V+  +  +G +PD   Y+ L++ LCK  +   A  ++++M   G
Sbjct: 613 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 672

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N V YN+L+ GLC  G+++ +    + ++ KGLVPN  TY+ L++ + K   +  A 
Sbjct: 673 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 732

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L ++++A G  P+   Y+VL TG    G  E+A+    ++  +G   ++ S+N L+   
Sbjct: 733 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGF 791

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G+ +E  +LL  + G    P  +T   +I  L+  GK      +  E+ +     +A
Sbjct: 792 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 851

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
             ++ +   + ++GK+ L V  +D M    CK  EG  +   ML  V   + A     S 
Sbjct: 852 RHFSSLFMDMINQGKIPLDV--VDDMIRDHCK--EGNLDKALMLRDVIVAKSAPMGCSS- 906

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
                      Y  ++ +LCRKGK  +A  LL EM K G
Sbjct: 907 -----------YLAIVDNLCRKGKLSEALNLLKEMDKRG 934



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/483 (22%), Positives = 196/483 (40%), Gaps = 55/483 (11%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M +KG KP+      L+   C+   +  A ++ + M    ++PD   Y  L+  L K
Sbjct: 455 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 514

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  + +   +M++ G   N  TY+ L+ G    G+L  + Q + R++  GL PN   
Sbjct: 515 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 574

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  LLE+ +K   +         ++ +G   +   Y +L+  L   G  E A R    + 
Sbjct: 575 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 634

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+V  Y+ L+  LC     E+A  +L EM      P IV YN LI  L   G   
Sbjct: 635 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 694

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           +A  V + ++     P+  +Y  +I   C  G +       ++M      P+   Y+ L 
Sbjct: 695 YARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754

Query: 386 MLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             C   G +++A  +I+ +  + ++S   F   ++   C++GK  +  +LL+ +   G  
Sbjct: 755 TGCSSAGDLEQAMFLIEEMFLRGHASISSFNN-LVDGFCKRGKMQETLKLLHVIMGRGLV 813

Query: 445 PDSYTYSSLIRGL----------------------------------------------- 457
           P++ T  ++I GL                                               
Sbjct: 814 PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVD 873

Query: 458 ------CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
                 C EG +++AL +  V+          ++ A++  LC+  +   +L + + M ++
Sbjct: 874 DMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 933

Query: 512 GQM 514
           G +
Sbjct: 934 GNL 936



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 134/274 (48%), Gaps = 29/274 (10%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +++KG  P+ V  T+L+   CK   +  A  +   M+++GI PDA  Y+ L       G+
Sbjct: 703 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 762

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  AM L+E+M   G+ + + ++N+LV G C  G + ++L+ L  ++ +GLVPNA T   
Sbjct: 763 LEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 821

Query: 209 L---LEAAYKERGVHAAM----------------KLLDDIIAKGGKPNLVSYNVLLTGLC 249
           +   L  A K   VH                    L  D+I +G  P L   + ++   C
Sbjct: 822 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDMIRDHC 880

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG-GDRSPTI 308
           KEG  ++A+     + +K       SY  ++ +LC +G+  EA  LL EMD  G+  PT+
Sbjct: 881 KEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTL 940

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           V    L+G   +  +  H   +L+++V   F PS
Sbjct: 941 VA---LLGIFWF--RRHH--HILNKVVFTVFAPS 967


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 217/463 (46%), Gaps = 1/463 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A++  + M   G  P+++    ++  LCKA K + A ++ E     G  P++ +Y 
Sbjct: 406 KVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYC 465

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L KKGNV  A +L E M D G+  N V Y SL+R   M G      +    + ++
Sbjct: 466 SLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRR 525

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+    +  ++  +K   V     + +DI   G  P++ SY++L+ GL K G+  E 
Sbjct: 526 GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARET 585

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +  +GF  +  +YN ++   C  G+ ++A E+L EM      PT+ TY  +I  
Sbjct: 586 SSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDG 645

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           LA   + D A  + +E        +   Y+ +I      G++D     L++M  +   PN
Sbjct: 646 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 705

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T+N L   L    ++ EA    QS+   + S     Y  +I  LCR  K  +AF    
Sbjct: 706 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 765

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G  P+  TY+++I GL   G I +A  +F   +     PD  +FNAL+ G+  + 
Sbjct: 766 EMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHAN 825

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           R   +  VF+    KG   N      L++ +   + LE +A V
Sbjct: 826 RAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVV 868



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 222/452 (49%), Gaps = 2/452 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  +A+  L+++  +G  P VV   ++L  L K  K+ +A+ + E M      P++S+Y 
Sbjct: 337 QFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAE-PNSSTYN 395

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC  G V  A  + ++ME  G   N +T N +V  LC       + +  +   Q+
Sbjct: 396 IIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQR 455

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN+ TY  L++   K+  V  A +L ++++  G   N V Y  L+      GR E+ 
Sbjct: 456 GCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDG 515

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F+++  +G +P++   N  +  +   G  E+   +  ++ G    P + +Y+ILI  
Sbjct: 516 HKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHG 575

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+      +   M +  F   A +YN ++   C  GK+D   + L++M  +R  P 
Sbjct: 576 LTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPT 635

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  +   L  + ++ EA+ + +   +K        Y  +I    + G+  +A+ +L 
Sbjct: 636 VATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILE 695

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G TP+ YT++SL+  L     I EAL  F  M+E    P+   ++ L+ GLC+ +
Sbjct: 696 EMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQ 755

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           + + +   +Q M ++G +PN  TYT ++ G+A
Sbjct: 756 KYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLA 787



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 222/504 (44%), Gaps = 37/504 (7%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA------------------------ 117
           A+     + S+G KPD V  T++++ LCKA ++ +A                        
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIM 330

Query: 118 -----------IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT 166
                       K+++ +   G IP   S+  ++ CL KK  V  A+ L E M+    P 
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP- 389

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N+ TYN ++  LCM G + ++    D +   GL PN  T + +++   K +    A ++ 
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF 449

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           +    +G  PN V+Y  L+ GL K+G  ++A R F ++   G   N V Y  L+R+  M 
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMH 509

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GR E+ +++  EM+     P +   N  +  +   G  +    + +++    F P   SY
Sbjct: 510 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 569

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
           + +I  L   G+          M  +    +   YN +    C  GK+ +A+ +++ +  
Sbjct: 570 SILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKV 629

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K+       Y  +I  L +  +  +A+ L  E    G   +   YSSLI G    G I+E
Sbjct: 630 KRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 689

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A  I   M +    P+V  +N+L+  L K+   + +L  FQ M E    PN  TY+IL+ 
Sbjct: 690 AYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILIN 749

Query: 526 GIAHQDELELSAEVLKELQLRQVV 549
           G+    +   +    +E+Q + +V
Sbjct: 750 GLCRVQKYNKAFVFWQEMQKQGLV 773



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 225/499 (45%), Gaps = 37/499 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M   G+        +L+  L +  ++  A +V+  M      P  S+YT L+  + +
Sbjct: 135 LEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAE 194

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A++L+ +M++ GY      + +LVR L   G +  +L  +D +    L P+   
Sbjct: 195 ARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVL 254

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+  ++   K   V  A K   ++ ++G KP+ VSY  ++  LCK GR  EA   F  + 
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQME 314

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           ++   P   +YN ++      G++E A +LL ++      P++V++N ++  L    K D
Sbjct: 315 TERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVD 374

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL + + M K    P++++YN II  LC  GKV+      D+M H    PN  T N + 
Sbjct: 375 EALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMV 433

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC   K + A+ + ++   +  +     Y  +I  L +KG    A++L   M   G  
Sbjct: 434 DRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHN 493

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEE----------------------------- 475
            +   Y+SLIR   M G  E+  +IF  M                               
Sbjct: 494 ANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAI 553

Query: 476 ------YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
                 Y + PDV +++ L+ GL K+ +   +  +F  M ++G   +   Y  +V+G   
Sbjct: 554 FEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCK 613

Query: 530 QDELELSAEVLKELQLRQV 548
             +L+ + EVL+E+++++V
Sbjct: 614 SGKLDKAYEVLEEMKVKRV 632



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 88/191 (46%), Gaps = 1/191 (0%)

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           PN    + ++ L    ++ +A  +I ++   +       Y  +I ++    +  +A +LL
Sbjct: 146 PNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELL 205

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +M + G+      +++L+R L  EG +E AL +   ++    +PD+  +N  +    K+
Sbjct: 206 RQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKA 265

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL-RQVVSESAV 554
              D++ + F  +  +G  P++ +YT ++  +     L  + E+  +++  R V    A 
Sbjct: 266 GNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAY 325

Query: 555 ERLVMQYDFEG 565
             ++M Y   G
Sbjct: 326 NTMIMGYGSAG 336



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 66/152 (43%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++N+A +  + M      P+    + L+  LC+  K  KA    + M   G++
Sbjct: 714 DALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLV 773

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT ++  L K GN+  A  L E+ +  G   +  ++N+L+ G+       ++   
Sbjct: 774 PNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHV 833

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
            +    KG   N      LL+A  K   +  A
Sbjct: 834 FEETRLKGCRINVKACISLLDALNKAECLEQA 865


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 214/450 (47%), Gaps = 34/450 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K NDA      M      P +V  + LL  + K  K +  I +   +   GI  D  S++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++C C+   +  A+  + KM   G+  + VT+ SLV G C +  + +++  +D+++  
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN   Y+ ++++  + R V  A+ +L+ +   G +P++++YN L+T L   G+   +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R   D+   G  P+V++++ ++     EG+  EA +   EM      P IVTYN LI  
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  HG  D A KVL+ MV   F P+A +YN ++   C   +VD  +K L  M H     +
Sbjct: 293 LCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGD 352

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                             +  Y     C+ G+   A ++L  
Sbjct: 353 TFTYNTL-----------------------------YQGY-----CQAGQFNAAEKVLAR 378

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD YT++ L+ GLC  G IE+AL     +++ +    +  +N ++ G+CK+ +
Sbjct: 379 MVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANK 438

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            + +  +F  +  KG  P+  TYT ++ G+
Sbjct: 439 VEDAWYLFCSLALKGVSPDVITYTTMMIGL 468



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 190/407 (46%), Gaps = 34/407 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L+ A   L +M+  G +P +V   +L+   C  N++++A+ +++ +V  G  
Sbjct: 116 DCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYE 175

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  +++ LC+   V  A+ ++  ME  G   + +TYNSL+  L   G    S + 
Sbjct: 176 PNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARI 235

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +++ G+ P+  T+S +++   KE  +  A K  D++I +   PN+V+YN L+ GLC 
Sbjct: 236 LSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCI 295

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +EA +    + SKGF PN V+YN L+   C   R ++A ++L  M          T
Sbjct: 296 HGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFT 355

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN L       G+ + A KVL  MV     P   ++N ++  LC  GK++          
Sbjct: 356 YNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIE---------- 405

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
                        L  L  + K +    II              Y  +I  +C+  K   
Sbjct: 406 -----------KALVKLEDLQKSETVVGIIT-------------YNIIIKGMCKANKVED 441

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           A+ L   +   G +PD  TY++++ GL  + L  EA E++  M++ D
Sbjct: 442 AWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDD 488



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 193/436 (44%), Gaps = 34/436 (7%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K   A+ +   M  S  +P    ++ L+  + K       + L   +E  G   +  +++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           +L+   C    L+ +L  L ++++ G  P+  T+  L+        +  AM L+D I+  
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G +PN+V YN ++  LC+  + + A+     +   G  P+V++YN L+  L   G+W  +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             +L++M      P ++T++ +I      G+   A K  DEM++    P+  +YN +I  
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           LC  G +D   K L+ M  +   PN  TYN L                            
Sbjct: 293 LCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTL---------------------------- 324

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                 +   C+  +   A ++L  M+  G   D++TY++L +G C  G    A ++   
Sbjct: 325 ------VNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLAR 378

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M      PD+  FN LL GLC+  + + +L   + + +   +    TY I+++G+   ++
Sbjct: 379 MVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANK 438

Query: 533 LELSAEVLKELQLRQV 548
           +E +  +   L L+ V
Sbjct: 439 VEDAWYLFCSLALKGV 454



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 197/422 (46%), Gaps = 3/422 (0%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           I+   ++  +L   L +KGN   A+ L   + ++G  +    Y   +R        N +L
Sbjct: 1   IVIALTAKGFLHRHLLEKGNPVTALSL--NVCNFGAFSGGSDYRERLRSGLHSIKFNDAL 58

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
                + +   +P+   +S LL A  K +   A + L   I   G   +L S++ L+   
Sbjct: 59  TLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCF 118

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C+  R   A+     +   GFEP++V++  L+   C   R +EA  L+ ++ G    P +
Sbjct: 119 CRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNV 178

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           V YN +I SL  + + D AL VL+ M K   RP   +YN +I RL   GK  +  + L  
Sbjct: 179 VIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSD 238

Query: 369 MFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M      P+  T++ +  + G  G++ EA      +  +        Y  +I  LC  G 
Sbjct: 239 MMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGL 298

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A ++L  M   GF P++ TY++L+ G C    +++A++I  VM       D   +N 
Sbjct: 299 LDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNT 358

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L  G C++ + + + +V   M+  G +P+  T+ +L++G+    ++E +   L++LQ  +
Sbjct: 359 LYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSE 418

Query: 548 VV 549
            V
Sbjct: 419 TV 420


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 221/468 (47%), Gaps = 2/468 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A    + +++ G K  VV AT L++  C   +++KA+ + E  +  G++P   +YT
Sbjct: 262 RMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYT 321

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+    ++G    A +L  +M D+G   +T  +N +++GL        ++     +   
Sbjct: 322 VLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADS 381

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+AFTY+ L+    + R +  A+ L + +   G KP +V+Y+ LL   C  G  +EA
Sbjct: 382 G-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEA 440

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ + ++P KGF PNVV+Y  L++    +  +++A  LLAEM     S    TYN LI  
Sbjct: 441 VKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLING 500

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+     ++L       F P+A +YN II      G +        QM  +   PN
Sbjct: 501 LCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPN 560

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +   C       A  ++  +  K        Y  +I   C++G    A Q+L 
Sbjct: 561 IVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLV 620

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M K G  P+   Y+S I G     ++EEAL  +  M +     D   +  L+ G  K  
Sbjct: 621 LMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDG 680

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               +L+++  M+ KG +P+  T+T L  G+    +++ + ++L E+ 
Sbjct: 681 NVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMN 728



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 207/446 (46%), Gaps = 6/446 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+    +M   G  P   +   ++  L      K A+ + + M  SGI PDA +Y  L++
Sbjct: 336 AYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIH 394

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LC++  +  A+ L EKM + G     VTY+SL+   C+ G ++++++    +  KG  P
Sbjct: 395 WLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTP 454

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L++    +     A  LL ++   G   N  +YN L+ GLC  GR  E     
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML 514

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +   ++GF P  ++YN ++      G    A  +  +M      P IVTY   I      
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
              D ALK+L+++     RP  A+YN +I   C EG +   ++ L  M      PN   Y
Sbjct: 575 SCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634

Query: 382 NGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           N  + + G   +  ++EA    + +  +        Y  +I    + G    A +L  EM
Sbjct: 635 N--SFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G  PD  T+++L  GLC  G I++A ++   M   D +P+V  +N L+ G  ++ + 
Sbjct: 693 VAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKL 752

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILV 524
             +  +   M+E+  MP++TTY ILV
Sbjct: 753 QEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 209/455 (45%), Gaps = 6/455 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  KGH  D      ++    K      A+++ + M +S I PD    +  +  LCK  +
Sbjct: 168 MRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ ++ KM+D G+     T+NS+V  L   G + ++L   D L+  G   +    + 
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+     +R V  A+ + ++ +  G  P  V+Y VL+ G  +EG  E+A    R +   G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHA 327
             P+   +N++++ L  +  W++A  L  EM D G   P   TYNILI  L    K   A
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG--IPDAFTYNILIHWLCQRRKIREA 405

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           L + ++M +   +P   +Y+ ++   C  G +D  VK   +M  +   PN  TY  L M 
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL-MK 464

Query: 388 CGVGKV--QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             + K    +A+A++  +     S     Y  +I  LC  G+  +  ++L      GF P
Sbjct: 465 GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVP 524

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
            + TY+S+I G    G++  A  ++  M      P++  + + + G CK+   DL+L++ 
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKML 584

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             +  KG  P+   Y  L+ G   +  +  + +VL
Sbjct: 585 NDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVL 619



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 175/380 (46%), Gaps = 3/380 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            K+ +A    E+M   G KP +V   +LL   C    M +A+K+   M   G  P+  +Y
Sbjct: 400 RKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTY 459

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+     K     A  L+ +M+  G   N  TYN+L+ GLC++G + +  + L R   
Sbjct: 460 TTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET 519

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G VP A TY+ ++    K   + +A  +   + AKG  PN+V+Y   + G CK    + 
Sbjct: 520 EGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDL 579

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++   D+  KG  P++ +YN L+   C EG    A ++L  M      P I  YN  I 
Sbjct: 580 ALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFIT 639

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                   + AL+  ++M+K       A+Y  +I     +G V   +K   +M  +   P
Sbjct: 640 GYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIP 699

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQL 434
           +  T+  L   LC  G + +A  ++  + N+ +  P    Y  +I    R GK  +AF+L
Sbjct: 700 DHITFTALTHGLCRNGDIDDARKLLDEM-NRLDIRPNVLMYNMLINGYLRNGKLQEAFRL 758

Query: 435 LYEMTKYGFTPDSYTYSSLI 454
             EM +    PD  TY  L+
Sbjct: 759 HDEMLERKIMPDDTTYDILV 778



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 149/313 (47%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            + A+  L  M   G   +      L+  LC   ++ +  ++++   + G +P A +Y  
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N   K G +G A  + ++M   G P N VTY S + G C     + +L+ L+ +  KG
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P+   Y+ L+    +E  +  A+++L  ++  G  PN+  YN  +TG       EEA+
Sbjct: 592 LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           RF+  +  +G + +  +Y  L+     +G    A +L +EM      P  +T+  L   L
Sbjct: 652 RFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +G  D A K+LDEM +   RP+   YN +I      GK+    +  D+M  R+  P++
Sbjct: 712 CRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDD 771

Query: 379 GTYNGLAMLCGVG 391
            TY+ L  +  +G
Sbjct: 772 TTYDILVGMKSLG 784



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 207/478 (43%), Gaps = 36/478 (7%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M + G+ PDA S T L+    +  +   A+ L+ +M   G+P +   ++ ++R     G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            + +++  D +    + P+    S  + +  K R  + A+ +L  +   G  P   ++N 
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++  L K GR EEA+    +L + G + +VV    L+   C++    +A ++  E     
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEM---------------VKGRFR-------- 340
             PT VTY +LI      G  + A ++  +M               +KG           
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 341 -----------PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML-C 388
                      P A +YN +I  LC   K+   +   ++M     KP   TY+ L +  C
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             G + EA  +   +  K  +     Y  ++     K    +A+ LL EM + G + + Y
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY++LI GLC+ G + E  E+    E   + P    +N+++ G  K+     +  V+Q M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE-SAVERLVMQYDFEG 565
             KG  PN  TYT  ++G       +L+ ++L +++ + +  + +A   L+  +  EG
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEG 610


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 205/448 (45%), Gaps = 36/448 (8%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A KV + M  +G+ P    +  LV   C++G V     L+  M  YG+  +  T   +VR
Sbjct: 57  ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 116

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            LC  G      +F  R+++ G  PN   Y+  ++   K R V  A  +L++++ +G KP
Sbjct: 117 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 176

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           N+ ++  L+ GLCK G TE A R F  L  S  ++PNV +Y +++   C EG+   A  L
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L  M      P   TY  LIG     G  D A +++++M +  F P+  +YN +I   C 
Sbjct: 237 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 296

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           +                                  GK+QEA+ +++   ++     +  Y
Sbjct: 297 K----------------------------------GKIQEAYKVLRMATSQGLKFDKITY 322

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +IT  C++G    A  L   M + G  PD   Y+SLI   C +  +EE+ + F     
Sbjct: 323 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 382

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P    + +++ G CK  R+ L+L VF+ M++ G   +  TY  L+ G+  +  LE 
Sbjct: 383 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLE- 441

Query: 536 SAEVLKELQLRQVVSESAVERLVMQYDF 563
            A+ L E  L + +    V R+ + +++
Sbjct: 442 EAKALYEGMLDKRLVPCEVTRVTLTFEY 469



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 208/437 (47%), Gaps = 7/437 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  D      RM+  G  P+VV  T  +  LCK   +K+A  V+E MV  G+ P+  ++T
Sbjct: 123 RFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHT 182

Query: 138 YLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            L++ LCK G    A +L  K+ +   Y  N  TY  ++ G C  G L ++   L R+++
Sbjct: 183 TLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 242

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +GL PN  TY+ L+    K      A +L++ +  +G  PN+ +YN ++ G CK+G+ +E
Sbjct: 243 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 302

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A +  R   S+G + + ++Y IL+   C +G    A +L   M      P I  Y  LI 
Sbjct: 303 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 362

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +     + + + K  D+ +     P+  +Y  +IA  C  G+  L ++  ++M    C  
Sbjct: 363 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFA 422

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT-SLCRKGKTYQAFQL 434
           +  TY  L + LC   +++EA A+ + + +K+   P E  +  +T   CR+ KT  A  +
Sbjct: 423 DSITYGALISGLCKESRLEEAKALYEGMLDKR-LVPCEVTRVTLTFEYCRREKTSIAVSV 481

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L  + K       +T   ++R L   G ++ A      + + DY  D   +   +    +
Sbjct: 482 LDRLDK---RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYE 538

Query: 495 SRRTDLSLEVFQMMIEK 511
           + R  L+ E+ +   +K
Sbjct: 539 NNRYALASEMSEKFSKK 555



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 199/437 (45%), Gaps = 5/437 (1%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           C+  K+++   ++  M   G   D ++ T +V  LC+KG      +   +M + G P N 
Sbjct: 84  CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNV 143

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           V Y + + GLC    + Q+   L+ ++ +GL PN +T++ L++   K      A +L   
Sbjct: 144 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLK 203

Query: 229 IIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           +I     KPN+ +Y V++ G C+EG+   A      +  +G +PN  +Y  L+   C  G
Sbjct: 204 LIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGG 263

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
            ++ A EL+ +M      P I TYN +I      GK   A KVL        +    +Y 
Sbjct: 264 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYT 323

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNK 406
            +I   C +G +   +   D+M    C P+   Y  L +  C   +++E+          
Sbjct: 324 ILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMI 383

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                ++ Y  +I   C+ G++  A ++   M + G   DS TY +LI GLC E  +EEA
Sbjct: 384 GLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEA 443

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             ++  M +    P       L    C+  +T +++ V   + ++ Q+    T  ++V  
Sbjct: 444 KALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVH---TVDVVVRK 500

Query: 527 IAHQDELELSAEVLKEL 543
           ++   +++ ++  LK++
Sbjct: 501 LSALGDVDAASLFLKKV 517



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 3/314 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ KL  A + L RMV +G KP+    T L+   CK     +A ++M  M   G +P+  
Sbjct: 226 REGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIY 285

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  CKKG +  A +++      G   + +TY  L+   C  G++  +L   DR+
Sbjct: 286 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 345

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+   Y+ L+    ++R +  + K  D  +  G  P   +Y  ++ G CK GR+
Sbjct: 346 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 405

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+R F  +   G   + ++Y  L+  LC E R EEA  L   M      P  VT   L
Sbjct: 406 TLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTL 465

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                   KT  A+ VLD + K   R    + + ++ +L + G VD     L ++     
Sbjct: 466 TFEYCRREKTSIAVSVLDRLDK---RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDY 522

Query: 375 KPNEGTYNGLAMLC 388
             +  TY G    C
Sbjct: 523 AVDHATYTGFINSC 536


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 209/432 (48%), Gaps = 1/432 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDVV    L+    +A  +  AI +++ M + G+ P   +Y  ++  LCK      A ++
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
              M+      +  ++N L+ G C +G + ++++F   +  + + P+  ++S L+    +
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR 309

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  A   L ++   G  P+ V Y +++ G C+ G   EA+R   ++   G  P+VV+
Sbjct: 310 RGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVT 369

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN LL  LC + R  +A +LL EM+    +P + T+  LI      G  ++AL++ D ++
Sbjct: 370 YNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           + R RP   +YN +I  +C +G +    +  D M  R   PN  TY+ L    C  G+V+
Sbjct: 430 RQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVE 489

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +AF  +  +  K N      Y  +I   CR G   +  Q L +M +    PD  T+++LI
Sbjct: 490 DAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLI 549

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G   E  +  A  +F +ME+   +PD   +N ++ G  +      +  VF+ M + G  
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIE 609

Query: 515 PNETTYTILVEG 526
           P+  TY  L+ G
Sbjct: 610 PDRYTYMSLING 621



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 205/455 (45%), Gaps = 45/455 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D R R   ++ A   ++ M ++G KP +V   ++L  LCK  +  KA +V   M    + 
Sbjct: 200 DARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVA 259

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQL----------------------------------- 155
           PD  S+  L+   C+ G V  A++                                    
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + +M+  G   + V Y  ++ G C  G+++++L+  D ++  G +P+  TY+ LL    K
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +  +  A KLL+++  +G  P+L ++  L+ G C++G  E A++ F  L  +   P+VV+
Sbjct: 380 QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVT 439

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN L+  +C +G   +ANEL  +M   +  P  +TY+ILI S    G+ + A   LDEMV
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMV 499

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           K    P+  +YN II   C  G V    + L +M      P+  T+N L      G ++E
Sbjct: 500 KKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIH----GYIKE 555

Query: 396 -----AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
                AF +   +  +        Y  +I     +G    A ++   M   G  PD YTY
Sbjct: 556 ENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTY 615

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            SLI G    G  ++A ++   M    + PD D F
Sbjct: 616 MSLINGHVTAGNSKQAFQLHDEMIHRGFAPD-DKF 649



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 204/440 (46%), Gaps = 34/440 (7%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+    ++ K ++A +   +++   +   AS+   L+  L + G    A +    +    
Sbjct: 93  LIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSD 152

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  T N +V   C     + +   +  + ++ + P+  T++ L++A ++   V AA+
Sbjct: 153 SEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAI 212

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L+D +  +G KP +V+YN +L GLCK  R ++A   FR +      P+V S+NIL+   
Sbjct: 213 ALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGF 272

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G  +EA +   EM     +P +V+++ LIG  +  G+ DHA   L EM      P  
Sbjct: 273 CRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDG 332

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
             Y  +I   C  G +   ++  D+M    C P+  TYN L                   
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL------------------- 373

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                          +  LC++ +   A +LL EM + G TPD  T+++LI G C +G  
Sbjct: 374 ---------------LNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNF 418

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           E AL++F  +     +PDV  +N+L+ G+C+      + E++  M  +  +PN  TY+IL
Sbjct: 419 ENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSIL 478

Query: 524 VEGIAHQDELELSAEVLKEL 543
           ++    + ++E +   L E+
Sbjct: 479 IDSHCEKGQVEDAFGFLDEM 498



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 218/469 (46%), Gaps = 3/469 (0%)

Query: 88  RMVSKGHKPDVVQATN-LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           R++     P    A+N LL  L +A     A +   +++SS    +A +   +V+  CK 
Sbjct: 111 RLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKT 170

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
                A  ++ +ME      + VT+N L+      G+++ ++  +D +  +GL P   TY
Sbjct: 171 LEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTY 230

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + +L+   K R    A ++   +      P++ S+N+L+ G C+ G  +EA++F++++  
Sbjct: 231 NSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQH 290

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +   P+VVS++ L+      G  + A   L EM G    P  V Y ++IG     G    
Sbjct: 291 RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE 350

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           AL+V DEMV     P   +YN ++  LC + ++    K L++M  R   P+  T+  L  
Sbjct: 351 ALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIH 410

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C  G  + A  +  +L  ++       Y  +I  +CRKG   +A +L  +M      P
Sbjct: 411 GYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILP 470

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TYS LI   C +G +E+A      M +    P++  +N+++ G C+S       +  
Sbjct: 471 NHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFL 530

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           Q M +    P+  T+  L+ G   ++ +  +  V   ++ +++V   AV
Sbjct: 531 QKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIME-KEMVRPDAV 578



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/273 (19%), Positives = 118/273 (43%), Gaps = 1/273 (0%)

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           R     E+++ +     +P    +++LI +     K   A +    ++  R    A++ N
Sbjct: 67  RGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASN 126

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            ++A L   G   L  +    +     + N  T N +    C   +   A  +I  +  +
Sbjct: 127 ALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKR 186

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   +  +I +  R G    A  L+  M   G  P   TY+S+++GLC     ++A
Sbjct: 187 CVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKA 246

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            E+F  M++    PDV +FN L+ G C+      +++ ++ M  +   P+  +++ L+  
Sbjct: 247 KEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            + + E++ +   L+E++   +V +  +  +V+
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 218/447 (48%), Gaps = 21/447 (4%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RMV+ G  P+      L+  LCK      A+K+ + M+  GI+P+   YT L++ LC  G
Sbjct: 197 RMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAG 256

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A+QL+  M+D G   + VTYN+ + GLC +G +N++ Q L  L   G       YS
Sbjct: 257 KIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYS 316

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++  ++ R           ++ +   P++V Y +++ G  + GR E+A+ F   +  K
Sbjct: 317 CLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF P+   YN +L+ LC  G  E A+ L +EM   +      T  I+I  L   G  D A
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           +++ DEM +    P+  +YN +I     EG+++        +FH+    N  +   L + 
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA----RMLFHKMEMGNNPSLF-LRLT 491

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
            G  +V+++                E  + ++  +C+ G+  +A++LL  +   G  PD 
Sbjct: 492 LGANQVRDS----------------ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY++LI GLC    ++ A+ +F  ++     PD   +  L+ GL ++ R + ++ +FQ 
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELE 534
           +++ G  P+ + Y  ++  +    +L 
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLS 622



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 200/440 (45%), Gaps = 22/440 (5%)

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
           A +   A++    M      P A  Y  ++  L   G +  A+ L  +M   G   N  T
Sbjct: 150 AGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN L+ GLC  G    +L+  D ++ +G++PN   Y+ LL +      +  A++LL  + 
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK 269

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            KG  P+ V+YN  L+GLCK GR  EA +    L   GF   +  Y+ L+  L    R++
Sbjct: 270 DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           E       M   + SP +V Y I+I   A  G+ + AL  LD M K  F P    YN ++
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQ 407
             LC  G ++       +M       +  T     M+CG+   G V EA  I   +G   
Sbjct: 390 KVLCDHGDLERAHTLRSEMLQNNLVLDSTTQT--IMICGLCKRGLVDEAMQIFDEMGEHG 447

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP--------------DSYTYSSL 453
                  Y  +I    R+G+  +A  L ++M + G  P              DS +   L
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKL 506

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           +  +C  G + +A ++   + +    PDV  +N L+ GLCK+R  D ++ +F+ +  KG 
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGI 566

Query: 514 MPNETTYTILVEGI--AHQD 531
            P+E TY  L++G+  AH++
Sbjct: 567 SPDEITYGTLIDGLLRAHRE 586



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 229/537 (42%), Gaps = 57/537 (10%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA    + M+ +G  P+V   T LL  LC A K+ +A++++  M   G +PD  +Y   +
Sbjct: 225 DALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFL 284

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPT---------------------------------- 166
           + LCK G V  A Q +  ++D G+                                    
Sbjct: 285 SGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNIS 344

Query: 167 -NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            + V Y  ++RG    G +  +L FLD + +KG VP+ F Y+ +L+       +  A  L
Sbjct: 345 PDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTL 404

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
             +++      +  +  +++ GLCK G  +EA++ F ++   G +P V++YN L+     
Sbjct: 405 RSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYR 464

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNI-------------LIGSLAYHGKTDHALKVLD 332
           EGR EEA  L  +M+ G+     +   +             L+  +   G+   A K+L 
Sbjct: 465 EGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLR 524

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
            ++     P   +YN +I  LC    +D  V+   ++  +   P+E TY  L   L    
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL--YEMTKYGFTPDSYT 449
           +  +A  + Q++    +S     Y  ++ SLCR  K  QA  L   Y   KY F  +S  
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEV 644

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
            ++  + +    L +   E+  + +EY      + +   L+GLC+ RRTD +L +F  + 
Sbjct: 645 LANAHKEIEDGSLDDGVRELIKIDQEYG-SISSNPYTIWLIGLCQVRRTDDALRIFHTLQ 703

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVL-----KELQLRQVVSESAVERLVMQY 561
           E G         +L+  +     L  + +++     K + L Q V    +  L + Y
Sbjct: 704 EFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICY 760



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 158/361 (43%), Gaps = 36/361 (9%)

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A    L D  A G   +  ++  L+      GR  +A++ F  +      P    YN +L
Sbjct: 120 AMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTIL 179

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           ++L   G    A  L   M     +P   TYN+L+  L   G    ALK+ DEM+     
Sbjct: 180 KALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIM 239

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAF-- 397
           P+   Y  +++ LC+ GK+D  V+ L  M  + C P+E TYN  L+ LC VG+V EAF  
Sbjct: 240 PNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQR 299

Query: 398 -AIIQ----SLGNK---------------------------QNSSPQ-EFYKYVITSLCR 424
             ++Q    +LG K                           +N SP    Y  +I     
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAE 359

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G+   A   L  M K GF PD++ Y+++++ LC  G +E A  +   M + +   D   
Sbjct: 360 AGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT 419

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              ++ GLCK    D ++++F  M E G  P   TY  L++G   +  LE +  +  +++
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479

Query: 545 L 545
           +
Sbjct: 480 M 480



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 5/290 (1%)

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           L S+    + VS  + L S   E  ++     LA+        +   +  L+ + +  G+
Sbjct: 97  LRSRPLHAHAVSLLLRLSSHADEAMFDA----LADARAAGLPASSSAFAALVAAHSSAGR 152

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              A++    M + + RP+A  YN I+  L   G + L +   ++M    C PN  TYN 
Sbjct: 153 HADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNV 212

Query: 384 LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L   LC  G   +A  +   + ++      + Y  +++SLC  GK  +A QLL  M   G
Sbjct: 213 LMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG 272

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD  TY++ + GLC  G + EA +  V++++  +   +  ++ L+ GL ++RR D   
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGF 332

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             ++ M+E+   P+   YTI++ G A    +E +   L  ++ +  V ++
Sbjct: 333 GYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDT 382



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 39/271 (14%)

Query: 65  KPGNNNDTRHRDHKL---NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM 121
           + G   + R   HK+   N+  L L   +      D      L++D+C++ ++ KA K++
Sbjct: 464 REGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLL 523

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
             ++ SG++PD  +Y  L+N LCK  N+  A++L ++++  G   + +TY +L+ GL   
Sbjct: 524 RSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRA 583

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK--------- 232
              N ++     ++Q G  P+   Y+ ++ +  + + +  A+ L  D + K         
Sbjct: 584 HRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESE 643

Query: 233 ---------------GGKPNLVS------------YNVLLTGLCKEGRTEEAIRFFRDLP 265
                           G   L+             Y + L GLC+  RT++A+R F  L 
Sbjct: 644 VLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQ 703

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
             G +       +L+  LC +     A +++
Sbjct: 704 EFGIDITPACCALLINYLCWDRNLNAAVDIM 734


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 218/487 (44%), Gaps = 45/487 (9%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A+    +M+  G  P +     L++ LCK   +++  K++  ++ +G+ P+  ++   +
Sbjct: 199 EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFI 258

Query: 141 NCLCKKG-------NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             LC+KG        V  A   + KM + G   +  TYN+++ G   +G +  + + L  
Sbjct: 259 QGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD 318

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
              KG VP+ FTY  L+    ++  +  A+ L ++ + KG KP++V YN L+ GL ++G 
Sbjct: 319 AKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGL 378

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +A++   D+  +G  P++ +YN+++  LC  G   +AN LL         P I T+N 
Sbjct: 379 VLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNT 438

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI       K D+A+ +LD M      P   +YN I+  LC   K + V++    +  + 
Sbjct: 439 LIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKG 498

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C PN  TYN L   LC   KV EA  +++ + N+        +  VI+  C  G   +A+
Sbjct: 499 CLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAY 558

Query: 433 Q------------------------------------LLYEMTKYGFTPDSYTYSSLIRG 456
           Q                                    L +EM   G  PDSYTY  +I G
Sbjct: 559 QLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDG 618

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            C  G +    +  +   E  + P +  F  ++  LC   R   ++ +  +M+  G +P 
Sbjct: 619 FCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP- 677

Query: 517 ETTYTIL 523
           E   TI 
Sbjct: 678 EAVVTIF 684



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 236/518 (45%), Gaps = 50/518 (9%)

Query: 43  RVLASTQVTI--SPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQ 100
           RVL   ++ +  S  + VY    R  G       R  K+ +A    ERM     +P +  
Sbjct: 61  RVLMEMRLNVDNSLLEGVYVSAMRNYG-------RKGKVQEAVDVFERMDFYNCEPSIFS 113

Query: 101 ATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
              ++  L +     +A KV   M   GI PD  ++T  +   C+      A++L+  M 
Sbjct: 114 YNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMP 173

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
             G   N V Y +++ G        ++ +  +++++ G+ P+  T++ L+    K+  + 
Sbjct: 174 SQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQ 233

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE-------EAIRFFRDLPSKGFEPNV 273
              KLL+ ++  G  PNL ++N+ + GLC++G  E       EA  +   + +KG EP+ 
Sbjct: 234 EGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDD 293

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
            +YN ++      G+ ++A+ +L +       P   TY  LI  +   G  DHAL + +E
Sbjct: 294 FTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEE 353

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
            +    +PS   YN +I  L  +G V   ++ ++ M      P+  TYN           
Sbjct: 354 ALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYN----------- 402

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
                                   VI  LC+ G    A  LL      G+ PD +T+++L
Sbjct: 403 -----------------------LVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTL 439

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G C    ++ A+ I   M  +   PDV  +N++L GLCK+ + +  +E F+M++EKG 
Sbjct: 440 IDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGC 499

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +PN  TY IL+E +    ++  + ++L+E++ R ++ +
Sbjct: 500 LPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 187/405 (46%), Gaps = 35/405 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ DA   L+    KG  PD     +L+  +C+   +  A+ + E  +  G+ P    Y 
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYN 367

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  L ++G V  A+QL+  M   G   +  TYN ++ GLC +G ++ +   L+  I K
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAK 427

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+ FT++ L++   K   +  A+ +LD + + G  P++++YN +L GLCK  + E+ 
Sbjct: 428 GYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F+ +  KG  PN+++YNIL+ SLC   +  EA +LL E+      P  V++  +I  
Sbjct: 488 METFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISG 547

Query: 318 LAYHGKTDHALKVLDEMVKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
              +G  D A ++   M +  R   + A+YN +I     +  +D+  K   +M  + C P
Sbjct: 548 FCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDP 607

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           +  T                                  Y+ +I   C+ G     +  L 
Sbjct: 608 DSYT----------------------------------YRVMIDGFCKVGNVNSGYDFLL 633

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           +  + GF P   T+  +I  LC++  + EA+ I  +M      P+
Sbjct: 634 KEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPE 678



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 180/386 (46%), Gaps = 31/386 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  ++ A    E  + KG KP +V    L+  L +   + KA+++M  M   G+ PD  
Sbjct: 340 QDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIW 399

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N LCK G V  A  L+      GY  +  T+N+L+ G C    ++ ++  LD +
Sbjct: 400 TYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSM 459

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ P+  TY+ +L    K       M+    I+ KG  PN+++YN+L+  LCK  + 
Sbjct: 460 WSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKV 519

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIVTYNI 313
            EA+    ++ ++G  P+ VS+  ++   C  G  +EA +L   M+   R   T+ TYNI
Sbjct: 520 TEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNI 579

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQM 369
           +I + +     D A K+  EM      P + +Y  +I   C  G V    D ++K ++  
Sbjct: 580 MINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIG 639

Query: 370 FHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSL----------------GNKQNSSPQ 412
           F     P+  T+   +  LC   +V EA  I+  +                  K  ++P 
Sbjct: 640 F----VPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIFDADKKAVAAP- 694

Query: 413 EFYKYVITSLCRKGK-TYQAFQLLYE 437
              K ++  L +K   TY A++LLY+
Sbjct: 695 ---KIIVEDLLKKSHITYYAYELLYD 717



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 16/237 (6%)

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEM--------VKGRFRPSAASYNPIIARLCSEGK 358
           T +TY  +I  L +HG+ D   +VL EM        ++G +  +  +Y         +GK
Sbjct: 39  TFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYG-------RKGK 91

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           V   V   ++M    C+P+  +YN +  +L   G   +A  +   + ++  +     +  
Sbjct: 92  VQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTI 151

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            I S CR  +   A +LL  M   G   ++  Y ++I G   E    EA E+F  M    
Sbjct: 152 RIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLG 211

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             P +  FN L+  LCK        ++   +++ G  PN  T+ I ++G+  +  LE
Sbjct: 212 IFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLE 268


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 233/476 (48%), Gaps = 7/476 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  +A+  L++M  +G KPDVV  T L+  LC A ++  A  V   M +S   PD  +Y 
Sbjct: 266 RFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYI 325

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++     G+    +++   M+  GY  N V Y ++V  LC +G ++++    D++ QK
Sbjct: 326 TLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQK 385

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P  ++Y+ L+    K   ++ A++L + +   G  PN  +Y + +    K G + +A
Sbjct: 386 GIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKA 445

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I+ +  + SKG  P+VV+ N +L SL   GR   A  +  E+      P  +TY ++I  
Sbjct: 446 IKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKC 505

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +     D A+KV  EM++ R  P   + N +I  L   G+ +   K   ++      P 
Sbjct: 506 CSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPT 565

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQL 434
           + TYN  LA L   GKV+E   +++ +    NS P     Y  V+  LC+ G+   A  +
Sbjct: 566 DCTYNTLLAGLGREGKVKEVMHLLEEM--NSNSYPPNLITYNTVLDCLCKNGEVNYALGM 623

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           LY MT  G  PD  +Y++ + GL  E  + EA  IF  M++    PD      +L    K
Sbjct: 624 LYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVK 682

Query: 495 SRRTDLSLEVF-QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           +   + +L    + +++ G   + +++  L+EGI  +  +E S E  + + L +++
Sbjct: 683 NGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRIL 738



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 204/446 (45%), Gaps = 35/446 (7%)

Query: 79   LNDAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            +N+A   L E ++  G K D     +L+  + K   M+K+I+  E +  S I+ D    +
Sbjct: 686  MNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLS 745

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+  LCK      A +LV+K E  G    T +YN+L+ GL     ++ +      + + 
Sbjct: 746  PLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRL 805

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            G  P+ FTY+ +L+A  K   +   +K+  ++  KG +   V+YN +++GL K     EA
Sbjct: 806  GCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEA 865

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +  +  L S+GF P   +Y  LL  L  +G+ E+A +L  EM      P    YNIL+  
Sbjct: 866  MDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNG 925

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                G T+   ++   MV     P   SY  +I  LC+ G+++  +    Q+     +P+
Sbjct: 926  YRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPD 985

Query: 378  EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
              TYN                +I  LG                   R G+  +A  L  +
Sbjct: 986  LITYN---------------LLIHGLG-------------------RSGRLEEAVSLFND 1011

Query: 438  MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
            M K G  P+ YTY+SLI  L  EG   EA +++  + +  +KP+V  +NAL+ G   S  
Sbjct: 1012 MEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGS 1071

Query: 498  TDLSLEVFQMMIEKGQMPNETTYTIL 523
            TD +   +  MI  G  PN +TY  L
Sbjct: 1072 TDNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 230/538 (42%), Gaps = 81/538 (15%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A  + E M SKG  PDVV    +LY L K+ ++  A +V   + S G+ PD  +YT ++ 
Sbjct: 445 AIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIK 504

Query: 142 CLCKKGNVGYAMQLVEKM-----------------------------------EDYGYPT 166
           C  K  N   AM++  +M                                   ++     
Sbjct: 505 CCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDP 564

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
              TYN+L+ GL   G + + +  L+ +      PN  TY+ +L+   K   V+ A+ +L
Sbjct: 565 TDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGML 624

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            ++  KG  P+L SYN  L GL KE R  EA R F  +  K   P+  +   +L S    
Sbjct: 625 YNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKN 683

Query: 287 GRWEEANELLAE--MDGGDRSPTIVTYNILIGSLAYHG---------------------- 322
           G   EA   L E  +  G ++     ++++ G L   G                      
Sbjct: 684 GLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFF 743

Query: 323 ---------KTDHALKVLDEMVKGRFRP-----SAASYNPIIARLCSEGKVDLVVKCLDQ 368
                    K+  AL+   E+VK +F          SYN +I  L  E  +D+      +
Sbjct: 744 LSPLIRHLCKSKKALEA-HELVK-KFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSE 801

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           M    C P+E TYN   +L  +GK   +++   + + +  K   S    Y  +I+ L + 
Sbjct: 802 MKRLGCDPDEFTYN--LILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKS 859

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
              Y+A  L Y++   GF+P   TY  L+ GL  +G IE+A ++F  M +Y  KP+   +
Sbjct: 860 KMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIY 919

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           N LL G   +  T+   E+FQ M+++G  P+  +YT+L+  +     L  S    ++L
Sbjct: 920 NILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQL 977



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/520 (23%), Positives = 235/520 (45%), Gaps = 41/520 (7%)

Query: 65  KPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQAT---NLLYDLCKAN-KMKKAIKV 120
           +PG  N          D    L+   S   +P +V  T   N + +L +A+ +++   +V
Sbjct: 75  RPGAQNVVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQV 134

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
            ++M    +  +  ++  +   L  +G +  A   +  M++ G   N+ TYN L+  L  
Sbjct: 135 FDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVK 194

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            G   ++++    +   G+VP+  TYS L+  A+ +R V   + LL ++   G KPN+ S
Sbjct: 195 SGYDREAMEVYKVMATDGIVPSVRTYSVLM-LAFGKRDVETVVWLLREMEDHGVKPNVYS 253

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y + +  L + GR EEA +  + +  +G +P+VV+  +L++ LC  GR  +A ++  +M 
Sbjct: 254 YTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMK 313

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
             D+ P  VTY  L+     +G +   +++ + M    +  +  +Y  ++  LC  G+VD
Sbjct: 314 ASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVD 373

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG--------------- 404
                 DQM  +  +P + +YN L +      ++  A  +   +                
Sbjct: 374 EASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFI 433

Query: 405 ---NKQNSSPQEFYKY-----------------VITSLCRKGKTYQAFQLLYEMTKYGFT 444
               K   S +   +Y                 V+ SL + G+   A ++ +E+   G  
Sbjct: 434 NYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVC 493

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD+ TY+ +I+        +EA+++F  M E    PDV   N+L+  L K+ R + + ++
Sbjct: 494 PDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKI 553

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F  + E    P + TY  L+ G+  + +++    +L+E+ 
Sbjct: 554 FHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMN 593



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 225/490 (45%), Gaps = 40/490 (8%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R+ K+ +    LE M S  + P+++    +L  LCK  ++  A+ ++  M   G +PD S
Sbjct: 578  REGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLS 637

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKME-----DY--------------------------- 162
            SY   ++ L K+  +  A ++  +M+     DY                           
Sbjct: 638  SYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYI 697

Query: 163  ---GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
               G   +  +++SL+ G+     + +S++F + +    ++ + F  S L+    K +  
Sbjct: 698  LQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKA 757

Query: 220  HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
              A +L+    + G      SYN L+ GL  E   + A   F ++   G +P+  +YN++
Sbjct: 758  LEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLI 817

Query: 280  LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
            L ++    R E+  ++  EM       T VTYN +I  L        A+ +  +++   F
Sbjct: 818  LDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGF 877

Query: 340  RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEA 396
             P+  +Y P++  L  +GK++      D+M    CKPN   YN   +L G    G  ++ 
Sbjct: 878  SPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYN--ILLNGYRLAGNTEKV 935

Query: 397  FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
              + Q++ ++  +   + Y  +I +LC  G+   +     ++T+ G  PD  TY+ LI G
Sbjct: 936  CELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHG 995

Query: 457  LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            L   G +EEA+ +F  ME+    P++  +N+L+L L K  +   + ++++ +++ G  PN
Sbjct: 996  LGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPN 1055

Query: 517  ETTYTILVEG 526
              TY  L+ G
Sbjct: 1056 VFTYNALIGG 1065



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 215/466 (46%), Gaps = 10/466 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M + G  P V   + L+    K + ++  + ++  M   G+ P+  SYT  +  L + G 
Sbjct: 208 MATDGIVPSVRTYSVLMLAFGKRD-VETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGR 266

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A ++++KMED G   + VT   L++ LC  G ++ +     ++      P+  TY  
Sbjct: 267 FEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYIT 326

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL+         + +++ + + A G   N+V+Y  ++  LC+ GR +EA   F  +  KG
Sbjct: 327 LLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKG 386

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            EP   SYN L+       R   A EL   M+    +P   TY + I    Y+GK+  +L
Sbjct: 387 IEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFIN---YYGKSGESL 443

Query: 329 KVLD--EMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           K +   E++K +   P   + N ++  L   G++ +  +   ++      P+  TY  + 
Sbjct: 444 KAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMI 503

Query: 386 MLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             C       EA  +   +   +          +I +L + G+  +A+++ +E+ +    
Sbjct: 504 KCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLD 563

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P   TY++L+ GL  EG ++E + +   M    Y P++  +N +L  LCK+   + +L +
Sbjct: 564 PTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGM 623

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
              M  KG MP+ ++Y   + G+  +D L  +  +    Q+++V++
Sbjct: 624 LYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIF--CQMKKVLA 667



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 140/276 (50%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  ++ D     + M  KG++   V    ++  L K+  + +A+ +   ++S G  
Sbjct: 819  DAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFS 878

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L++ L K G +  A  L ++M DYG   N   YN L+ G  + GN  +  + 
Sbjct: 879  PTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCEL 938

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
               ++ +G+ P+  +Y+ L+ A      ++ ++     +   G +P+L++YN+L+ GL +
Sbjct: 939  FQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGR 998

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             GR EEA+  F D+   G  PN+ +YN L+  L  EG+  EA ++  E+      P + T
Sbjct: 999  SGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFT 1058

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            YN LIG  +  G TD+A     +M+ G   P++++Y
Sbjct: 1059 YNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 255/489 (52%), Gaps = 19/489 (3%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M   G  PD++    L+  L K+  +  A+++ + M   G+ PD   Y  L++   +
Sbjct: 172 LTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLR 231

Query: 146 KGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           KG+   A ++ +++  E   YP+   TYN ++ GLC LG L++S++  +R+ +    P+ 
Sbjct: 232 KGDFVKANEIWKRLLTESSVYPS-VETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDL 290

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           FT+S ++    K    +AA K+  ++I  G  P++ +YN +L+GL + G+  +    + +
Sbjct: 291 FTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW-N 349

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEA---NELLAEMDGGDRSPTIVTYNILIGSLAY 320
           + SK    N+VSYN+L++ L    + E+A    +LL E   G ++ +  TY +LI  L  
Sbjct: 350 VMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHER--GLKADS-TTYGLLINGLCK 406

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           +G  + AL++L+E           +Y+ ++  LC +G ++  V+ + QM   R K N   
Sbjct: 407 NGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHV 466

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +N L        K++EA ++++ + +K  +     Y  +I  LC+  +   A+  L EM 
Sbjct: 467 FNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML 526

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G  PD  TYS LI GLC    ++ AL ++        KPD+   N ++ GLC +++ D
Sbjct: 527 EEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVD 586

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           ++LE+F  M +   +P+  T+  ++EG+        + + ++ L++   + E+ ++  ++
Sbjct: 587 VALEIFTQMRQVNCVPDLVTHNTIMEGLYK------AGDCVEALKIWDRILEAGLQPDII 640

Query: 560 QYD--FEGI 566
            Y+  F+G+
Sbjct: 641 SYNITFKGL 649



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 222/496 (44%), Gaps = 50/496 (10%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYD-------LCKANKMKKAIKVMEMMVSSGIIPDA 133
           DA    + M  +G  PDV+   N+L D         KAN++ K      ++  S + P  
Sbjct: 202 DAVELFDEMSVRGVNPDVM-CYNILIDGFLRKGDFVKANEIWK-----RLLTESSVYPSV 255

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  ++N LCK G +  +M++  +M+      +  T++S++ GL   GN N + +    
Sbjct: 256 ETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQE 315

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN----------- 242
           +I+ GL P+  TY+ +L   ++   ++   +L + +++K    N+VSYN           
Sbjct: 316 MIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWN-VMSKNNCCNIVSYNMLIQGLLDNKK 374

Query: 243 ------------------------VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
                                   +L+ GLCK G   +A+R   +  ++G + +  +Y+ 
Sbjct: 375 VEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSS 434

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++  LC +G  E+A EL+ +M    R      +N LI       K + A+ VL EM    
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKD 494

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
             P+  SYN II  LC   +       L +M     KP+  TY+ L   LC   KV  A 
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMAL 554

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +     NK+     + +  +I  LC   K   A ++  +M +    PD  T+++++ GL
Sbjct: 555 NLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGL 614

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
              G   EAL+I+  + E   +PD+ ++N    GLC   R   ++E     +++G +PN 
Sbjct: 615 YKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNA 674

Query: 518 TTYTILVEGIAHQDEL 533
            T+ +LV  +     L
Sbjct: 675 PTWNVLVRAVVDDKPL 690



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 223/447 (49%), Gaps = 5/447 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P +    ++L    ++N+ ++A        ++G+ P+  +Y  L+   CKK      
Sbjct: 109 GCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKG 168

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             L+  M + G   + ++Y +L+  L   GNL  +++  D +  +G+ P+   Y+ L++ 
Sbjct: 169 KGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDG 228

Query: 213 AYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
             ++     A ++   ++ +    P++ +YN+++ GLCK G+ +E++  +  +      P
Sbjct: 229 FLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSP 288

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           ++ +++ ++  L   G +  A ++  EM     SP + TYN ++  L   GK +   ++ 
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM--LCG 389
           + M K     +  SYN +I  L    KV+  + C  Q+ H R    + T  GL +  LC 
Sbjct: 349 NVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAI-CYWQLLHERGLKADSTTYGLLINGLCK 406

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            G + +A  I++   N+        Y  ++  LC+KG   QA +L+++M K     +S+ 
Sbjct: 407 NGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHV 466

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           ++SLI G      +EEA+ +   M+  D  P V ++N ++ GLCK+ R   +    + M+
Sbjct: 467 FNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML 526

Query: 510 EKGQMPNETTYTILVEGIAHQDELELS 536
           E+G  P+  TY++L++G+   ++++++
Sbjct: 527 EEGLKPDMITYSLLIDGLCRGEKVDMA 553



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 181/384 (47%), Gaps = 37/384 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KLN  F +L  ++SK +  ++V    L+  L    K+++AI   +++   G+  D++
Sbjct: 337 RTGKLNKCF-ELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADST 395

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK G +  A++++E+ E+ G   +T  Y+S+V GLC  G L Q+++ + ++
Sbjct: 396 TYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQM 455

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +     N+  ++ L+    +   +  A+ +L ++ +K   P +VSYN ++ GLCK  R 
Sbjct: 456 KKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERF 515

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A    +++  +G +P++++Y++L+  LC   R E                        
Sbjct: 516 SDAYLSLKEMLEEGLKPDMITYSLLIDGLC---RGE------------------------ 548

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                   K D AL +  + +  R +P    +N II  LC+  KVD+ ++   QM    C
Sbjct: 549 --------KVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNC 600

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  T+N +   L   G   EA  I   +           Y      LC   +   A +
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIE 660

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGL 457
            LY+    G  P++ T++ L+R +
Sbjct: 661 FLYDALDRGILPNAPTWNVLVRAV 684



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 79/147 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K++ A     + ++K  KPD+     +++ LC A K+  A+++   M     +
Sbjct: 542 DGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCV 601

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  ++  L K G+   A+++ +++ + G   + ++YN   +GLC    ++ +++F
Sbjct: 602 PDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEF 661

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKER 217
           L   + +G++PNA T++ L+ A   ++
Sbjct: 662 LYDALDRGILPNAPTWNVLVRAVVDDK 688



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 112/264 (42%), Gaps = 14/264 (5%)

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVK--GRFRPSAASYNPIIARLCSEGKVDLVV 363
           P +++  +++  L      + AL + D   +  G   P    ++ I+ RL     V  V 
Sbjct: 5   PKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFV-FHHILRRLMDPKLVVHVG 63

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQ-EFYKYVI 419
           + +D M  +RC  +E     L+ +    K     +A  + Q++ +    +P    +  ++
Sbjct: 64  RIVDLMRAQRCTCSEDV--ALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSML 121

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
            +     +  +A          G +P+  TY+ LI+  C +   E+   +   M E    
Sbjct: 122 NAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLN 181

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           PD+ ++  L+  L KS     ++E+F  M  +G  P+   Y IL++G   + +   + E+
Sbjct: 182 PDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEI 241

Query: 540 LKELQLRQVVSESAVERLVMQYDF 563
            K L     ++ES+V   V  Y+ 
Sbjct: 242 WKRL-----LTESSVYPSVETYNI 260


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 213/456 (46%), Gaps = 10/456 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +++ A   L+ M  KG  PD V    ++  +CK  ++++A   +     +  +P  +
Sbjct: 169 QNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL-----AETVPVQA 223

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +V+ LC +  +     +V +M   G   N VTY ++V   C    L  +   L R+
Sbjct: 224 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 283

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  PN  T++ L++  +++  VH A+ +   ++ +G  P+ +SYNVL+ GLC  G  
Sbjct: 284 VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 343

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+ FF  +      PN  +Y+ L+      G  + A  +  EM      P +V Y  +
Sbjct: 344 KGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNM 403

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L      D A  ++D+M+     P+  ++N +I RLC  G+V   +     M    C
Sbjct: 404 IDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGC 463

Query: 375 KPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            PN+ TYN L  L G+   G  ++AFA++  + N         Y  VI  LC+      A
Sbjct: 464 HPNDRTYNEL--LHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHA 521

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             LL  M   G  PD++T++++I   C EG +  A  +   M   +   +V  +  L+  
Sbjct: 522 MLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISE 581

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           LC   +   ++     M+ +G  PNE T+ +LV  I
Sbjct: 582 LCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 224/485 (46%), Gaps = 14/485 (2%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M   G  P+V     L+  LC+ +++  A K+++ M   G  PD  S+  +V+ +CK 
Sbjct: 146 DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 205

Query: 147 GNVGYAMQLVEKMEDYGYPTNTV----TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           G V          E  G+   TV    +YN++V  LC    + +    ++ ++Q+GL PN
Sbjct: 206 GRVE---------EARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPN 256

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ +++A  K R +  A  +L  +++ G  PN++++  L+ G  ++G+  +A+  + 
Sbjct: 257 VVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWH 316

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  +G+ P+ +SYN+L+R LC  G  + A +    M      P   TY+ L+   +  G
Sbjct: 317 WMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAG 376

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             D A+ + +EM     +P+   Y  +I  LC +   D     +D+M    C PN  T+N
Sbjct: 377 DLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFN 436

Query: 383 GL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC  G+V  A  +   +           Y  ++  L R+G    AF ++ EM   
Sbjct: 437 TLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNN 496

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           GF     TY+++I  LC   + + A+ +   M     +PD   FNA++   CK  +  ++
Sbjct: 497 GFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIA 556

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
             +   M       N   YTIL+  + +Q +L  +   L ++    +    A   ++++ 
Sbjct: 557 ACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRA 616

Query: 562 DFEGI 566
            F  I
Sbjct: 617 IFTNI 621



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 164/380 (43%), Gaps = 45/380 (11%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P    Y+ LL+A  +E  V A + + D++   G  PN+ +YN+L+  LC+  R + A + 
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++  KG  P+ VS+  ++  +C  GR EEA   LAE       P   +YN ++ +L  
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-----VPVQASYNAVVHALCG 234

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             +      V++EMV+   +P+  +Y  I+   C   ++ +    L +M    C PN  T
Sbjct: 235 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 294

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +  L       GKV +A ++   + ++  +     Y  +I  LC  G    A      M 
Sbjct: 295 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 354

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV----------------- 482
           +    P++ TYS+L+ G    G ++ A+ I+  M+    KP+V                 
Sbjct: 355 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 414

Query: 483 -----------DN-------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
                      DN       FN L+  LC   R   +L VF  M   G  PN+ TY  L+
Sbjct: 415 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 474

Query: 525 EGI----AHQDELELSAEVL 540
            G+     H+D   +  E+L
Sbjct: 475 HGLFREGNHKDAFAMVIEML 494



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 143/297 (48%), Gaps = 7/297 (2%)

Query: 250 KEGRTEEAIR-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           + G  + A++ F+R       +P V  YN LL +L  E        +   M      P +
Sbjct: 98  RAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNV 157

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            TYN+LI +L  + + D A K+LDEM +    P   S+  I++ +C  G+V+       +
Sbjct: 158 YTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA-----R 212

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
            F     P + +YN +   LCG  ++ E F+++  +  +        Y  ++ + C+  +
Sbjct: 213 GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 272

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A  +L  M   G TP+  T+++L++G   +G + +AL ++  M +  + P   ++N 
Sbjct: 273 LRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNV 332

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           L+ GLC       +L+ F  M     +PN TTY+ LV+G ++  +L+ +  +  E++
Sbjct: 333 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 389



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 2/158 (1%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R  +HK  DAF  +  M++ G +  +V    ++  LC+    K A+ ++  M+  GI PD
Sbjct: 479 REGNHK--DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPD 536

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           A ++  +++  CK+G V  A  L+ +M     P N V Y  L+  LC  G L+ ++ +L 
Sbjct: 537 AFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLL 596

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           +++ +G+ PN  T++ L+ A +   G    + L   I+
Sbjct: 597 KMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIV 634



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 4/188 (2%)

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           + +E T   LA    V  VQ A   +Q +  +  +  ++     I +  R G   +A + 
Sbjct: 52  RHHEATVRRLAAAGDVDGVQYA---LQEMRLRGVACTEDALVAAIGAFARAGSADRALKT 108

Query: 435 LYEMTKYGF-TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            Y  +  G   P    Y+ L+  L  E ++   + ++  M +    P+V  +N L+  LC
Sbjct: 109 FYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALC 168

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           ++ R D + ++   M  KG  P+E ++  +V G+     +E +   L E    Q    + 
Sbjct: 169 QNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAV 228

Query: 554 VERLVMQY 561
           V  L  ++
Sbjct: 229 VHALCGEF 236



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 77/174 (44%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P+      LL+ L +    K A  ++  M+++G      +Y  ++NCLC+   
Sbjct: 458 MRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCM 517

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
             +AM L+ +M   G   +  T+N+++   C  G ++ +   L ++       N   Y+ 
Sbjct: 518 RKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTI 577

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           L+     +  +  AM  L  ++ +G  PN  ++NVL+  +     T   I  F+
Sbjct: 578 LISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFK 631


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 214/437 (48%), Gaps = 1/437 (0%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R  +L+  +  +E M  KG KP+     +++  LC+  K+ +A +    M+  GI+PD  
Sbjct: 736  RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             YT L++  CK+G++  A +   +M       + +TY +++ G C +G++ ++ +    +
Sbjct: 796  VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              KGL P++ T++ L+    K   +  A ++ + +I  G  PN+V+Y  L+ GLCKEG  
Sbjct: 856  FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 915

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            + A     ++   G +PN+ +YN ++  LC  G  EEA +L+ E +    +   VTY  L
Sbjct: 916  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
            + +    G+ D A ++L EM+    +P+  ++N ++   C  G ++   K L+ M  +  
Sbjct: 976  MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1035

Query: 375  KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             PN  T+N L    C    ++ A AI + + ++      + Y+ ++   C+     +A+ 
Sbjct: 1036 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 1095

Query: 434  LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            L  EM   GF+    TYS LI+G        EA E+F  M       D + F+       
Sbjct: 1096 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 1155

Query: 494  KSRRTDLSLEVFQMMIE 510
            K +R D  ++    +IE
Sbjct: 1156 KGKRPDTIVDPIDEIIE 1172



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 223/468 (47%), Gaps = 2/468 (0%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCK-ANKMKKAIKVMEMMVSSGIIPDASSYT 137
            L +A    E+M++ G    V      L  L K   K   AI V       G+  + +SY 
Sbjct: 634  LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             +++ +C+ G +  A  L+  ME  GY  + ++Y+++V G C  G L++  + ++ + +K
Sbjct: 694  IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            GL PN++ Y  ++    +   +  A +   ++I +G  P+ V Y  L+ G CK G    A
Sbjct: 754  GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
             +FF ++ S+   P+V++Y  ++   C  G   EA +L  EM      P  VT+  LI  
Sbjct: 814  SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                G    A +V + M++    P+  +Y  +I  LC EG +D   + L +M+    +PN
Sbjct: 874  YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933

Query: 378  EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              TYN +   LC  G ++EA  ++        ++    Y  ++ + C+ G+  +A ++L 
Sbjct: 934  IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993

Query: 437  EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            EM   G  P   T++ L+ G C+ G++E+  ++   M      P+   FN+L+   C   
Sbjct: 994  EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 1053

Query: 497  RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
                +  +++ M  +G  P+  TY  LV+G      ++ +  + +E++
Sbjct: 1054 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 227/463 (49%), Gaps = 1/463 (0%)

Query: 104  LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
            +++ +C+  ++K+A  ++ +M   G  PD  SY+ +VN  C+ G +    +L+E M+  G
Sbjct: 695  VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754

Query: 164  YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
               N+  Y S++  LC +  L ++ +    +I++G++P+   Y+ L++   K   + AA 
Sbjct: 755  LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814

Query: 224  KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            K   ++ ++   P++++Y  +++G C+ G   EA + F ++  KG EP+ V++  L+   
Sbjct: 815  KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 874

Query: 284  CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
            C  G  ++A  +   M     SP +VTY  LI  L   G  D A ++L EM K   +P+ 
Sbjct: 875  CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934

Query: 344  ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
             +YN I+  LC  G ++  VK + +        +  TY  L    C  G++ +A  I++ 
Sbjct: 935  FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994

Query: 403  LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
            +  K        +  ++   C  G      +LL  M   G  P++ T++SL++  C+   
Sbjct: 995  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054

Query: 463  IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            ++ A  I+  M      PD   +  L+ G CK+R    +  +FQ M  KG   + +TY++
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 1114

Query: 523  LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
            L++G   + +   + EV  +++   + ++  +        ++G
Sbjct: 1115 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 1157



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 73/137 (53%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  VI  +C+ G+  +A  LL  M   G+TPD  +YS+++ G C  G +++  ++  VM+
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               KP+   + +++  LC+  +   + E F  MI +G +P+   YT L++G   + ++ 
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811

Query: 535 LSAEVLKELQLRQVVSE 551
            +++   E+  R +  +
Sbjct: 812 AASKFFYEMHSRDITPD 828



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 63/128 (49%)

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           KT  A  +  E  + G   +  +Y+ +I  +C  G I+EA  + ++ME   Y PDV +++
Sbjct: 669 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 728

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ G C+    D   ++ ++M  KG  PN   Y  ++  +    +L  + E   E+  +
Sbjct: 729 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 788

Query: 547 QVVSESAV 554
            ++ ++ V
Sbjct: 789 GILPDTVV 796


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 222/495 (44%), Gaps = 33/495 (6%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A    + M  K  +P+V   T L+  LC+ +    A K++  M+  G+IP   +Y  L+
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +  CKKG    A++++  ME      N  TYN L+ G C   N+++++  L +++++ L 
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN  TY+ L+    KE  + +A KLL  +   G  P+  +Y+V +  LCK G  EEA   
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  L  KG + N V Y+ L+   C  G+  +   LL +M      P  +TYN LI     
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                 A  ++D M+K    P+A +Y  +I  L  + + D      DQM      P+   
Sbjct: 567 EKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFI 626

Query: 381 YNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y   +   C  G++++A  +I  +  K        Y   I +  R G    AF +L  M 
Sbjct: 627 YTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMH 686

Query: 440 KYGFTPDSYTYSSLIRGL----------------------------CMEGL-IEEALEIF 470
           + G  P  YTYS LI+ L                            C   +  E  L++F
Sbjct: 687 EVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLF 746

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M E+   P+ + +   + GLCK    +++  +F  M EKGQ PNE  Y  L+ G + Q
Sbjct: 747 GKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL-GCSCQ 805

Query: 531 DELELSAEVLKELQL 545
             L L  E ++ L +
Sbjct: 806 --LGLYGEAIRWLDI 818



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 223/457 (48%), Gaps = 8/457 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ MV+    P++     ++   CK   + +A   +  +V +G+  D  +YT L+   C+
Sbjct: 196 LDDMVT----PNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCR 251

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             NV  A  +   M + G   N V+Y +L+ G C    ++++L+   ++ +    P   T
Sbjct: 252 NKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRT 311

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++ A  +      A+ +  ++  K  +PN+ +Y VL+  LC++   ++A +    + 
Sbjct: 312 YTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGML 371

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+VV+YN L+   C +G    A E+L+ M+  + SP   TYN LI      GK  
Sbjct: 372 EKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFC-RGKNI 430

Query: 326 H-ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-G 383
           H A+ +L +M++ + +P+  +YN +I   C EG +    K L  M      P+E TY+  
Sbjct: 431 HKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVF 490

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           +  LC  G V+EA ++ +SL  K   + +  Y  +I   C+ GK      LL +M   G 
Sbjct: 491 IDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGC 550

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+S TY+SLI G C E   +EA  +  +M + D +P  D +  L+  L K    D + +
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHD 610

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +F  M+  G  P+   YT  +        L+  AEVL
Sbjct: 611 MFDQMLSTGSHPDVFIYTAFIHAYCSHGRLK-DAEVL 646



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 207/422 (49%), Gaps = 3/422 (0%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M+   + P+  +   +VN  CK GNV  A   V K+   G   +T TY SL+ G C   N
Sbjct: 195 MLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKN 254

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           ++ +      +  KG + N  +Y+ L+    + R V  A+KL   +      P + +Y V
Sbjct: 255 VDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTV 314

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++  LC+ GR  EA+  F+++  K  +PNV +Y +L+ SLC +  +++A ++L  M    
Sbjct: 315 IIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKG 374

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P++VTYN LI      G +  AL++L  M      P+A +YN +I   C    +   +
Sbjct: 375 LIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAM 434

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
             L +M  R+ +PN  TYN L    C  G +  A+ ++ SL N+    P E+ Y   I +
Sbjct: 435 SLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLL-SLMNESGLVPDEWTYSVFIDT 493

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC++G   +A  L   + + G   +   YS+LI G C  G + +   +   M      P+
Sbjct: 494 LCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPN 553

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              +N+L+ G CK +    +  +  +MI++   P   TYTIL++ +   DE + + ++  
Sbjct: 554 SITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFD 613

Query: 542 EL 543
           ++
Sbjct: 614 QM 615



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 226/490 (46%), Gaps = 30/490 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++ A   L +M+ +  +P+VV    L++  CK   +  A K++ +M  SG++PD  
Sbjct: 426 RGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEW 485

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+  ++ LCK+G V  A  L E +++ G   N V Y++L+ G C +G ++     LD++
Sbjct: 486 TYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKM 545

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G VPN+ TY+ L++   KE+    A  L+D +I +  +P   +Y +L+  L K+   
Sbjct: 546 LSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEF 605

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A   F  + S G  P+V  Y   + + C  GR ++A  L+ +M+     P  + Y + 
Sbjct: 606 DQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLF 665

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG----------------- 357
           I +    G  D A  +L  M +    PS  +Y+ +I  L +                   
Sbjct: 666 IDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGV 725

Query: 358 ----------KVD--LVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLG 404
                     +VD    +    +M    C PN  TY   +  LC VG ++ A  +   + 
Sbjct: 726 ASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMK 785

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K  S  ++ Y  ++   C+ G   +A + L  M +    P   +   L+ GL  EG  E
Sbjct: 786 EKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDE 845

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A  +F    + +Y  D   +  L+ GL K   +D   ++F +M  +G   +  TY++L+
Sbjct: 846 KAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLI 905

Query: 525 EGIAHQDELE 534
           EG     E++
Sbjct: 906 EGFDGIQEID 915



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 220/496 (44%), Gaps = 32/496 (6%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D   +DA   L  M+ KG  P VV    L+   CK      A++++ +M S+   P+A +
Sbjct: 357 DSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNART 416

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L+   C+  N+  AM L+ KM +     N VTYN L+ G C  G+L  + + L  + 
Sbjct: 417 YNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMN 476

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + GLVP+ +TYS  ++   K   V  A  L + +  KG K N V Y+ L+ G CK G+  
Sbjct: 477 ESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVS 536

Query: 256 EAIRFFRD-LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +  RF  D + S G  PN ++YN L+   C E  ++EA  L+  M   D  P   TY IL
Sbjct: 537 DG-RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTIL 595

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +L    + D A  + D+M+     P    Y   I   CS G++      + +M  +  
Sbjct: 596 IDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGI 655

Query: 375 KPNEGTYNGLAMLCG-VGKVQEAFAIIQSLG----------------NKQNSSPQEFYKY 417
            P+   Y       G  G +  AF I++ +                 +  N+ P+E    
Sbjct: 656 MPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSS 715

Query: 418 VIT------------SLCRKGKTYQ-AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                          S C +   Y+    L  +M ++G  P++ TY   I GLC  G +E
Sbjct: 716 SELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLE 775

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            A  +F  M+E    P+ D +N+LL   C+      ++    +MIE   +P+  +  +L+
Sbjct: 776 VAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLL 835

Query: 525 EGIAHQDELELSAEVL 540
            G+  +   E +  V 
Sbjct: 836 CGLYDEGNDEKAKRVF 851



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 212/443 (47%), Gaps = 3/443 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M +KG   + V  TNL++  C+A ++ +A+K+   M      P   +YT ++  LC+ G 
Sbjct: 265 MPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGR 324

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ + ++M +     N  TY  L+  LC   N + + + L+ +++KGL+P+  TY+ 
Sbjct: 325 KTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNA 384

Query: 209 LLEAAYKERGVHA-AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           L++  Y ++G+ A A+++L  + +    PN  +YN L+ G C+     +A+     +  +
Sbjct: 385 LIDG-YCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLER 443

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
             +PNVV+YNIL+   C EG    A +LL+ M+     P   TY++ I +L   G  + A
Sbjct: 444 KLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEA 503

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
             + + + +   + +   Y+ +I   C  GKV      LD+M    C PN  TYN L   
Sbjct: 504 RSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDG 563

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C     +EA  ++  +  +      + Y  +I +L +  +  QA  +  +M   G  PD
Sbjct: 564 YCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPD 623

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            + Y++ I   C  G +++A  +   M      PD   +   +    +    D +  + +
Sbjct: 624 VFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILK 683

Query: 507 MMIEKGQMPNETTYTILVEGIAH 529
            M E G  P+  TY+ L++ +++
Sbjct: 684 RMHEVGCEPSYYTYSCLIKHLSN 706



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 170/373 (45%), Gaps = 39/373 (10%)

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +E ++D   P N  T N++V G C LGN+ ++  ++ +++Q GL  + FTY+        
Sbjct: 193 LEMLDDMVTP-NIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYT-------- 243

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                                       L+ G C+    + A   F  +P+KG   N VS
Sbjct: 244 ---------------------------SLILGYCRNKNVDAANAIFLSMPNKGCLRNEVS 276

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+   C   R +EA +L ++M   +  PT+ TY ++I +L   G+   AL +  EM 
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMT 336

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           +   +P+  +Y  +I  LC +   D   K L+ M  +   P+  TYN L    C  G   
Sbjct: 337 EKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSA 396

Query: 395 EAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            A  I+ SL    N SP    Y  +I   CR    ++A  LL++M +    P+  TY+ L
Sbjct: 397 SALEIL-SLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNIL 455

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G C EG +  A ++  +M E    PD   ++  +  LCK    + +  +F+ + EKG 
Sbjct: 456 IHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515

Query: 514 MPNETTYTILVEG 526
             NE  Y+ L++G
Sbjct: 516 KANEVIYSTLIDG 528



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 1/288 (0%)

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           R + +  F+  +  YN+LL  L      +E   +  EM     +P I T N ++      
Sbjct: 158 RRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKL 217

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    A   + ++V+        +Y  +I   C    VD        M ++ C  NE +Y
Sbjct: 218 GNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSY 277

Query: 382 NGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L    C   +V EA  +   +           Y  +I +LC+ G+  +A  +  EMT+
Sbjct: 278 TNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTE 337

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
               P+ +TY+ LI  LC +   ++A +I   M E    P V  +NAL+ G CK   +  
Sbjct: 338 KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSAS 397

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +LE+  +M      PN  TY  L+ G      +  +  +L ++  R++
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKL 445


>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 176/302 (58%), Gaps = 1/302 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K N++   LE +V+KG+ PDV+  T L+        ++KA +VME++  S   PD  +Y 
Sbjct: 83  KFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVFAYN 141

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  CK   +  A Q++ +M+  G+  + VTYN ++  LC    L  +L+ LD+L+  
Sbjct: 142 AVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLD 201

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +P   TY+ L+EA   E G++ AMKLL++++A+G  P++ +YN ++ G+CKEG  +E 
Sbjct: 202 NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEG 261

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +   ++ S+G EPN V+Y+IL+ SLC  GR +EA  +L  M   + +P   +Y+ LI +
Sbjct: 262 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 321

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D A+ ++D M+     P   +YN I+A LC  G  +  ++  +++    C PN
Sbjct: 322 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 381

Query: 378 EG 379
           +G
Sbjct: 382 DG 383



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 172/320 (53%), Gaps = 5/320 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LL   CKA K  +++  +E +V+ G  PD    T L+       N+  A +++E +E + 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
            P +   YN+++ G C +  +  + Q L+R+  +G +P+  TY+ ++ +    R +  A+
Sbjct: 134 EP-DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           K+LD ++     P +++Y +L+     EG   EA++   ++ ++G  P++ +YN ++R +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C EG W+E  +L+AEM      P  VTY+ILI SL   G+ D A+ VL  M++    P  
Sbjct: 253 CKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDT 312

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAI--- 399
            SY+P+I+ LC EG++DL +  +D M    C P+   YN  LA LC  G   +A  I   
Sbjct: 313 YSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNK 372

Query: 400 IQSLGNKQNSSPQEFYKYVI 419
           ++ +G   N   ++ + + I
Sbjct: 373 LRGMGCPPNDGERKLWSWQI 392



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 194/393 (49%), Gaps = 44/393 (11%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYN-------SLVRGLCMLGNL 184
           S +T +V C     N G+  +   K+       P +  +Y+        L+   C  G  
Sbjct: 25  SHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKF 84

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           N+SL FL+ L+ KG  P+    + L++  +  + +  A ++++ I+    +P++ +YN +
Sbjct: 85  NESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESHTEPDVFAYNAV 143

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           ++G CK  R E A +    + ++GF P++V+YNI++ SLC   +   A ++L ++   + 
Sbjct: 144 ISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNC 203

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            PT++TY ILI +    G  + A+K+L+EM+     P   +YN II  +C EG  D   K
Sbjct: 204 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEK 263

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
            + +MF R C+PN+ TY+ L                                  I+SLCR
Sbjct: 264 LVAEMFSRGCEPNKVTYSIL----------------------------------ISSLCR 289

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G+  +A  +L  M +   TPD+Y+Y  LI  LC EG ++ A+ I   M      PD+ N
Sbjct: 290 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 349

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           +N +L  LCK+   + +LE+F  +   G  PN+
Sbjct: 350 YNTILAALCKNGNANQALEIFNKLRGMGCPPND 382



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 145/302 (48%), Gaps = 2/302 (0%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           LL   CK G+  E++ F   L +KG+ P+V+    L++        E+A+ ++ E+    
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +  YN +I       + + A +VL+ M    F P   +YN +I  LC+  K+ L +
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           K LDQ+    C P   TY  L     V G + EA  +++ +  +        Y  +I  +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++G   +  +L+ EM   G  P+  TYS LI  LC  G I+EA+ +  VM E +  PD 
Sbjct: 253 CKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDT 312

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
            +++ L+  LCK  R DL++ +   MI  G +P+   Y  ++  +        + E+  +
Sbjct: 313 YSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNK 372

Query: 543 LQ 544
           L+
Sbjct: 373 LR 374



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 124/230 (53%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++  A   L RM ++G  PD+V    ++  LC   K+  A+KV++ ++    +P   +Y
Sbjct: 151 NRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY 210

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+     +G +  AM+L+E+M   G   +  TYN+++RG+C  G  ++  + +  +  
Sbjct: 211 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFS 270

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G  PN  TYS L+ +  +   +  A+ +L  +I K   P+  SY+ L++ LCKEGR + 
Sbjct: 271 RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDL 330

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           AI     + S G  P++V+YN +L +LC  G   +A E+  ++ G    P
Sbjct: 331 AIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 380



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 35/274 (12%)

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           LL   C  G++ E+   L  +     +P ++    LI         + A +V+ E+++  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFA 398
             P   +YN +I+  C   +++   + L++M  R   P+  TYN                
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYN---------------- 176

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
                              +I SLC + K   A ++L ++      P   TY+ LI    
Sbjct: 177 ------------------IMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATI 218

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
           +EG I EA+++   M      PD+  +NA++ G+CK    D   ++   M  +G  PN+ 
Sbjct: 219 VEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKV 278

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           TY+IL+  +     ++ +  VLK +  +++  ++
Sbjct: 279 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDT 312


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 208/411 (50%), Gaps = 3/411 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  A   L  M ++G + + V  T+++  LC   ++  A++V+E MV  G++ DA+ +T
Sbjct: 300 ELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFT 359

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++  C+KG++  A    ++M+  G   + VTY +L+ GLC  G L ++ + L  +  K
Sbjct: 360 TVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDK 419

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +A TY+ L++   K   +  A  + + ++ K   PN+V+Y  L  GLCK+G    A
Sbjct: 420 GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++ SKG E N+ +YN L+  LC  G  E+A   + +MD     P + TY  +IG+
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + D A  +L EM+    +P+  +YN ++   C  G+V+   + L+ M  +   PN
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599

Query: 378 EGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L    C    ++    I + + +++    +  Y  +I   C+     +A     
Sbjct: 600 TTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHS 659

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM--EEYDYKPDVDNF 485
           EM + GF   + +Y++LIR L  +    EA  +F  M  +    +PDV NF
Sbjct: 660 EMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNF 710



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 222/486 (45%), Gaps = 37/486 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    + M S    PDVV    +++  C  ++++ AIK++  M + G+  +  +YT
Sbjct: 268 RIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYT 324

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC +G V  A+++VE M  +G   +   + +++ G C  G+L  +  + D + ++
Sbjct: 325 SVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR 384

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +  TY+ L+    +   +  A ++L ++  KG   + V+Y VL+ G CK G+  EA
Sbjct: 385 GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEA 444

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  K   PNVV+Y  L   LC +G    ANELL EM        I TYN LI  
Sbjct: 445 FLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLING 504

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  + A++ + +M +   +P   +Y  II  LC   ++D     L +M  +  KP 
Sbjct: 505 LCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPT 564

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  +   C  G+     +LL  
Sbjct: 565 IVTYNVL----------------------------------MNGFCMSGRVEGGKRLLEW 590

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M +    P++ TY+SL++  C+E  ++   EI+  M   +  P+ + +N L+ G CK+R 
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +L     MIEKG     ++Y  L+  +  + +   +  + ++++  ++ +E  V   
Sbjct: 651 MKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNF 710

Query: 558 VMQYDF 563
            +   F
Sbjct: 711 YIDLSF 716



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 4/396 (1%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  SY  L+  LC  G +  A QL ++M     P + VTY  +V G C L  L  +++ L
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +  +GL  N   Y+ ++     E  V  A+++++D++  G   +   +  +++G C++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G    A  +F ++  +G   + V+Y  L+  LC  G  +EA  +L EM+        VTY
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
            +LI      GK   A  V ++MV+ R  P+  +Y  +   LC +G V    + L +M  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +  + N  TYN L   LC  G +++A   +  +           Y  +I +LC+  +  +
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  LL EM   G  P   TY+ L+ G CM G +E    +   M E +  P+   +N+L+ 
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             C  +    + E+++ M+ +  +PNE TY IL++G
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 155/308 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L +A   L+ M  KG   D V  T L+   CK  KM +A  V   MV   + P+  
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L + LCK+G+V  A +L+ +M   G   N  TYNSL+ GLC  GNL Q+++ +  +
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL P+ +TY+ ++ A  + + +  A  LL +++ KG KP +V+YNVL+ G C  GR 
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E   R    +  K   PN  +YN L++  C+E   +   E+   M   +  P   TYNIL
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           AL    EM++  FR +A+SYN +I  L  + K     +  ++M   R 
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRL 701

Query: 375 KPNEGTYN 382
                 YN
Sbjct: 702 TAEPDVYN 709



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 185/399 (46%), Gaps = 8/399 (2%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A+QL +++ +     NT +YN L++ LC  G +  + Q  D +      P+  TY  ++ 
Sbjct: 241 AVQLFQELPE----KNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVH 293

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
                  +  A+KLL ++ A+G + N V+Y  ++  LC EG+  +A+R   D+   G   
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL 353

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +   +  ++   C +G    A     EM     +   VTY  LI  L   G+   A +VL
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGV 390
            EM        A +Y  +I   C  GK+       ++M  +R  PN  TY  L+  LC  
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G V  A  ++  + +K        Y  +I  LC+ G   QA + + +M + G  PD YTY
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +++I  LC    ++ A  +   M +   KP +  +N L+ G C S R +    + + M+E
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE 593

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           K   PN TTY  L++    +  ++ + E+ K +  ++VV
Sbjct: 594 KNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 71/145 (48%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M+ K   P+     +L+   C    MK   ++ + M+S  ++P+ ++Y  L+   CK
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             N+  A+    +M + G+     +YN+L+R L       ++ +  +++ +  L      
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDV 707

Query: 206 YSFLLEAAYKERGVHAAMKLLDDII 230
           Y+F ++ ++ E  + + + L D+++
Sbjct: 708 YNFYIDLSFNEDNLESTLALCDELV 732


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 210/444 (47%), Gaps = 4/444 (0%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M   G+ PD  S+  +V   C  G V  A + +  M + G+  +  T   ++   C  G 
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGY 274

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           +N+ + +  ++++ GL PN   ++ L+    K+  +  A +LL++++ +G KPN+ ++  
Sbjct: 275 VNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334

Query: 244 LLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           L+ GLCK+G TE+A R F  L  S G++PNV +Y  ++   C E +   A  LL+ M   
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P   TY  LI      G    A +++D M K  F P+  +YN II  LC +G +D  
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454

Query: 363 VKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            + L+++     + +  TY  L ++ C       +      +     +     Y  +I+ 
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISX 514

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            CR+ +  ++ +L  E    G  P   TY+S+I G C  G    A+++F  M  +   PD
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              + AL+ GLCK  + D +  ++  M++KG  P E T   L      +D+   +  VL 
Sbjct: 575 SITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLD 634

Query: 542 ELQLRQVVSESAVERLVMQYDFEG 565
            L+ RQ +    V  LV +   EG
Sbjct: 635 RLEKRQWI--RTVNTLVRKLCSEG 656



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 202/421 (47%), Gaps = 19/421 (4%)

Query: 81  DAFLQ----------LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DAF Q            +MV  G  P+V+  T L+  LCK   +K+A +++E MV  G  
Sbjct: 267 DAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK 326

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           P+  ++T L++ LCKKG    A +L  K+    GY  N  TY +++ G C    LN++  
Sbjct: 327 PNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEM 386

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L R+ ++GLVPN  TY+ L++   K      A +L+D +  +G  PN+ +YN ++ GLC
Sbjct: 387 LLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K+G  +EA R    +   G + + V+Y IL+   C +     +     +M     +P I 
Sbjct: 447 KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIH 506

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +Y  LI       +   + ++ +E V     P+  +Y  +I   C  G   L VK   +M
Sbjct: 507 SYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566

Query: 370 FHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT-SLCRKGK 427
            +  C P+  TY  L + LC   K+ +A  +  ++ +K   SP E  +  +    C+K  
Sbjct: 567 SNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK-GLSPCEVTRLTLAYEYCKKDD 625

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
           +  A  +L  + K  +     T ++L+R LC EG ++ A   F   +  D +P+V+    
Sbjct: 626 SSTAINVLDRLEKRQWIR---TVNTLVRKLCSEGKLDMAALFF--HKLLDKEPNVNRVTL 680

Query: 488 L 488
           L
Sbjct: 681 L 681



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/462 (22%), Positives = 225/462 (48%), Gaps = 3/462 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           ++ +  +  K+K+A+ ++  M + G++    +   +++     G V  A  +  +M   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              + V++  +V   C +G + ++ ++L+ ++++G + +  T + +++A  ++  V+  +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                ++  G  PN++++  L+ GLCK+G  ++A     ++  +G++PNV ++  L+  L
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 284 CMEGRWEEANELLAEMDGGD-RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           C +G  E+A  L  ++   D   P + TY  +I       K + A  +L  M +    P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
             +Y  +I   C  G      + +D M      PN  TYN +   LC  G + EA+ ++ 
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +      +    Y  +++  CR+  T ++     +M K GFTPD ++Y++LI   C + 
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++E+  +F         P    + +++ G C+   T L++++FQ M   G  P+  TY 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            L+ G+  + +L+  A  L +  + + +S   V RL + Y++
Sbjct: 580 ALISGLCKESKLD-DARNLYDAMMDKGLSPCEVTRLTLAYEY 620



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 157/314 (50%), Gaps = 3/314 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KLN A + L RM  +G  P+    T L+   CK     +A ++M++M   G  P+  
Sbjct: 377 KEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIY 436

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ LCKKG++  A +L+ K+  +G   + VTY  L+   C   + N+SL F +++
Sbjct: 437 TYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM 496

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+  +Y+ L+    +++ +  + +L ++ ++ G  P   +Y  ++ G C+ G T
Sbjct: 497 LKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNT 556

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A++ F+ + + G  P+ ++Y  L+  LC E + ++A  L   M     SP  VT   L
Sbjct: 557 SLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                    +  A+ VLD + K   R    + N ++ +LCSEGK+D+      ++  +  
Sbjct: 617 AYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEP 673

Query: 375 KPNEGTYNGLAMLC 388
             N  T  G    C
Sbjct: 674 NVNRVTLLGFMNKC 687



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 58/128 (45%)

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +GNK      E  + ++ +    GK  +A  ++ EM   G    + T + ++      GL
Sbjct: 145 IGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGL 204

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +E A  +FV M +    PD  +F  +++  C   R   + +    M+E+G + +  T T+
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTL 264

Query: 523 LVEGIAHQ 530
           +++    +
Sbjct: 265 IIDAFCQK 272


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 215/447 (48%), Gaps = 21/447 (4%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RMV+ G  P+      L+  LCK      A+K+ + M+  GI+P+   YT L++ LC  G
Sbjct: 197 RMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAG 256

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A+QL+  M+D G   + VTYN+ + GLC +G +N++ Q L  L   G       YS
Sbjct: 257 KIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYS 316

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++  ++ R           ++ +   P++V Y +++ G  + GR E+A+ F   +  K
Sbjct: 317 CLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF P+   YN +L+ LC  G  E A+ L +EM   +      T  I+I  L   G  D A
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           +++ DEM +    P+  +YN +I     EG+++        +FH+    N          
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA----RMLFHKMEMGN---------- 482

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
                   +  +  +LG  Q    +   K ++  +C+ G+  +A++LL  +   G  PD 
Sbjct: 483 ------NPSLFLRLTLGANQVCDSESLRK-LVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY++LI GLC    ++ A+ +F  ++     PD   +  L+ GL ++ R + ++ +FQ 
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELE 534
           +++ G  P+ + Y  ++  +    +L 
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLS 622



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 200/440 (45%), Gaps = 22/440 (5%)

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
           A +   A++    M      P A  Y  ++  L   G +  A+ L  +M   G   N  T
Sbjct: 150 AGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN L+ GLC  G    +L+  D ++ +G++PN   Y+ LL +      +  A++LL  + 
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK 269

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            KG  P+ V+YN  L+GLCK GR  EA +    L   GF   +  Y+ L+  L    R++
Sbjct: 270 DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           E       M   + SP +V Y I+I   A  G+ + AL  LD M K  F P    YN ++
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQ 407
             LC  G ++       +M       +  T     M+CG+   G V EA  I   +G   
Sbjct: 390 KVLCDHGDLERAHTLRSEMLQNNLVLDSTTQT--IMICGLCKRGLVDEAMQIFDEMGEHG 447

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP--------------DSYTYSSL 453
                  Y  +I    R+G+  +A  L ++M + G  P              DS +   L
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKL 506

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           +  +C  G + +A ++   + +    PDV  +N L+ GLCK+R  D ++ +F+ +  KG 
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGI 566

Query: 514 MPNETTYTILVEGI--AHQD 531
            P+E TY  L++G+  AH++
Sbjct: 567 SPDEITYGTLIDGLLRAHRE 586



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 236/557 (42%), Gaps = 58/557 (10%)

Query: 62  PNRKPGNN-NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PNR   N   D   +     DA    + M+ +G  P+V   T LL  LC A K+ +A+++
Sbjct: 205 PNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQL 264

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT-------------- 166
           +  M   G +PD  +Y   ++ LCK G V  A Q +  ++D G+                
Sbjct: 265 LGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQ 324

Query: 167 ---------------------NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                                + V Y  ++RG    G +  +L FLD + +KG VP+ F 
Sbjct: 325 ARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFC 384

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +L+       +  A  L  +++      +  +  +++ GLCK G  +EA++ F ++ 
Sbjct: 385 YNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMG 444

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI------------ 313
             G +P V++YN L+     EGR EEA  L  +M+ G+     +   +            
Sbjct: 445 EHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLR 504

Query: 314 -LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+  +   G+   A K+L  ++     P   +YN +I  LC    +D  V+   ++  +
Sbjct: 505 KLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLK 564

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+E TY  L   L    +  +A  + Q++    +S     Y  ++ SLCR  K  QA
Sbjct: 565 GISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624

Query: 432 FQLL--YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             L   Y   KY F  +S   ++  + +    L +   E+  + +EY Y    + +   L
Sbjct: 625 INLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISS-NPYTIWL 683

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL-----KELQ 544
           +GLC+ RRTD +L +F  + E G         +L+  +     L  + +++     K + 
Sbjct: 684 IGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSII 743

Query: 545 LRQVVSESAVERLVMQY 561
           L Q V    +  L + Y
Sbjct: 744 LSQPVGNRLLRWLCICY 760



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 158/361 (43%), Gaps = 36/361 (9%)

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A    L D  A G   +  ++  L+      GR  +A++ F  +      P    YN +L
Sbjct: 120 AMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTIL 179

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           ++L   G    A  L   M     +P   TYN+L+  L   G    ALK+ DEM+     
Sbjct: 180 KALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIM 239

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAF-- 397
           P+   Y  +++ LC+ GK+D  V+ L  M  + C P+E TYN  L+ LC VG+V EAF  
Sbjct: 240 PNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQR 299

Query: 398 -AIIQ----SLGNK---------------------------QNSSPQ-EFYKYVITSLCR 424
             ++Q    +LG K                           +N SP    Y  +I     
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAE 359

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G+   A   L  M K GF PD++ Y+++++ LC  G +E A  +   M + +   D   
Sbjct: 360 AGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT 419

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              ++ GLCK    D ++++F  M E G  P   TY  L++G   +  LE +  +  +++
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479

Query: 545 L 545
           +
Sbjct: 480 M 480



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 5/290 (1%)

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           L S+    + VS  + L S   E  ++     LA+        +   +  L+ + +  G+
Sbjct: 97  LRSRPLHAHAVSLLLRLSSHADEAMFDA----LADARAAGLPASSSAFAALVAAHSSAGR 152

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              A++    M + + RP+A  YN I+  L   G + L +   ++M    C PN  TYN 
Sbjct: 153 NADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNV 212

Query: 384 LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L   LC  G   +A  +   + ++      + Y  +++SLC  GK  +A QLL  M   G
Sbjct: 213 LMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG 272

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD  TY++ + GLC  G + EA +  V++++  +   +  ++ L+ GL ++RR D   
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGF 332

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             ++ M+E+   P+   YTI++ G A    +E +   L  ++ +  V ++
Sbjct: 333 GYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDT 382


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 226/481 (46%), Gaps = 9/481 (1%)

Query: 80  NDAFLQLERMVSK---GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           N  F + E M+ K    H  + V    +L+   K  + K A+ V+E M    +  D  +Y
Sbjct: 239 NGEFRKAEDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTY 298

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +++ LC+      A  L+++M       +  TYN+L+ G    G +N +    + +++
Sbjct: 299 NIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLR 358

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           + LVP+  TY+ +++   + R +  A+ +L ++   G  P+ ++Y+ LL G CK      
Sbjct: 359 QNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGP 418

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNIL 314
           AI    DL S+G   N     IL+   C  G   +A ++L  M  DG D  P ++TY+ L
Sbjct: 419 AIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGID--PDVITYSAL 476

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +    K     ++L  M K    P+   Y  +I   C  G V   +K    ++ R  
Sbjct: 477 INGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGL 536

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N   +N  L      G + EA    Q +     S     +  +I S C +G    AF 
Sbjct: 537 VANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFS 596

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  +M +YG++P+  TY +L+RGLC  G + +A +    + +  +  D   FNALLLG+C
Sbjct: 597 VYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGIC 656

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +    D +L++ + MI+   +P+  TYTIL+ G   + ++ L A V+ ++ L + V    
Sbjct: 657 RYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKI-LPALVILQMMLEKGVVPDT 715

Query: 554 V 554
           V
Sbjct: 716 V 716



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 233/489 (47%), Gaps = 6/489 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ K+N A      M+ +   P V   T ++   C+  ++ KA+ ++  M  +G++P   
Sbjct: 342 REGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSEL 401

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+N  CK   +G A+ L+E ++  G   N      L+ G C +G ++++ Q L  +
Sbjct: 402 TYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSM 461

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+ P+  TYS L+    +   +H   ++L  +   G  PN V Y  L+   CK G  
Sbjct: 462 FEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYV 521

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA++ F D+  +G   N V +N LL +   EG   EA      M   + S   V++N +
Sbjct: 522 KEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRI 581

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I S  + G    A  V D+MV+  + P+  +Y  ++  LC  G +    + +  +     
Sbjct: 582 IDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPF 641

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAF 432
             +E T+N L + +C  G + EA  + + +  K N  P    Y  +++  CRKGK   A 
Sbjct: 642 AIDEKTFNALLLGICRYGTLDEALDLCEKM-IKNNCLPDIHTYTILLSGFCRKGKILPAL 700

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLL 490
            +L  M + G  PD+  Y+ L+ GL  EG ++ A  +F  ++ +E  Y  D   +N+L+ 
Sbjct: 701 VILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLY-ADCIAYNSLMN 759

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           G  KSR  +    +   M +    PN  +Y IL+ G   + +   S  + K +  + +  
Sbjct: 760 GYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRP 819

Query: 551 ESAVERLVM 559
           ++   RL++
Sbjct: 820 DNVTYRLLI 828



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 237/485 (48%), Gaps = 20/485 (4%)

Query: 104  LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
            LL  +C+   + +A+ + E M+ +  +PD  +YT L++  C+KG +  A+ +++ M + G
Sbjct: 651  LLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKG 710

Query: 164  YPTNTVTYNSLVRGLCMLGNLNQ-SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
               +TV Y  L+ GL   G +   S  F + + ++GL  +   Y+ L+    K R V+  
Sbjct: 711  VVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTI 770

Query: 223  MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             +++ D+      PN  SYN+L+ G  K G+  +++  ++ +  KG  P+ V+Y +L+  
Sbjct: 771  KRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILG 830

Query: 283  LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            L   G  + A + L +M      P  + ++ILI + +   K  +AL+V + M      PS
Sbjct: 831  LSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPS 890

Query: 343  AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
            + +++ +I  L  +G +D   K L +M     +PN   Y  L    C VG++  AF + +
Sbjct: 891  SKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKE 950

Query: 402  SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
             +        +     +I  LCR GK  +A  +   M + G  P   T+++L+  LC E 
Sbjct: 951  EMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKES 1010

Query: 462  LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
             I +AL +  +ME    + DV ++N L+ GLCK +    +L+++  M  KG  PN TTY 
Sbjct: 1011 KIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYI 1070

Query: 522  ILVEGIAHQDELELSAEVLKELQLRQVVS------------ESAVERLVM------QYDF 563
             L   +     ++   E+L++++ R ++             E A+ RL M      +  F
Sbjct: 1071 TLTGAMYSTGRVQNGEELLEDIEERGLIPAYKQPENLERRMEDAIIRLNMIRNCRKEVPF 1130

Query: 564  EGIEV 568
             G+E+
Sbjct: 1131 RGVEL 1135



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 212/439 (48%), Gaps = 2/439 (0%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            L++A    E+M+     PD+   T LL   C+  K+  A+ +++MM+  G++PD  +YT 
Sbjct: 661  LDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTC 720

Query: 139  LVNCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N L  +G V  A  +  E +   G   + + YNSL+ G     N+N   + +  + Q 
Sbjct: 721  LLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQN 780

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             + PN+ +Y+ L+    K      ++ L   ++ KG +P+ V+Y +L+ GL + G  + A
Sbjct: 781  EVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIA 840

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            ++F   +  +G  P+ + ++IL+ +   + +   A ++   M     SP+  T++ +I  
Sbjct: 841  VKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMING 900

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            L   G  DH+ KVL EM++   +P+   Y  ++   C  G++D   +  ++M      P 
Sbjct: 901  LIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPA 960

Query: 378  EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            E   + +   LC  GK++EA  +  S+           +  ++ SLC++ K   A  L  
Sbjct: 961  EVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKR 1020

Query: 437  EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
             M       D  +Y+ LI GLC +  I +AL+++  M+     P++  +  L   +  + 
Sbjct: 1021 LMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTG 1080

Query: 497  RTDLSLEVFQMMIEKGQMP 515
            R     E+ + + E+G +P
Sbjct: 1081 RVQNGEELLEDIEERGLIP 1099



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 127/554 (22%), Positives = 228/554 (41%), Gaps = 72/554 (12%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  A   +E + S+G   +    T L+   C+  ++ KA ++++ M   GI PD  +Y+ 
Sbjct: 416 LGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSA 475

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N +C+   +    +++ +M+  G   N V Y +L+   C  G + ++L+    + ++G
Sbjct: 476 LINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRG 535

Query: 199 LVPNAFTYSFLLEAAYKE----------------------------------RG-VHAAM 223
           LV N   ++ LL A Y+E                                  RG +  A 
Sbjct: 536 LVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAF 595

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            + DD++  G  PN+ +Y  LL GLC+ G   +A +F   L    F  +  ++N LL  +
Sbjct: 596 SVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGI 655

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G  +EA +L  +M   +  P I TY IL+      GK   AL +L  M++    P  
Sbjct: 656 CRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDT 715

Query: 344 ASYNPIIARLCSEGKV------------------------------------DLVVKCLD 367
            +Y  ++  L +EG+V                                    + + + + 
Sbjct: 716 VAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMS 775

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            M+     PN  +YN L       G+  ++  + + +  K        Y+ +I  L   G
Sbjct: 776 DMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECG 835

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
               A + L +M   G  PD   +  LI     +  +  AL++F  M+     P    F+
Sbjct: 836 LIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFS 895

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           A++ GL +    D S +V   M++ G  PN T Y  LV       E++ +  + +E++  
Sbjct: 896 AMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAI 955

Query: 547 QVVSESAVERLVMQ 560
            +V     E  +++
Sbjct: 956 GIVPAEVAESSIIR 969



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/523 (22%), Positives = 229/523 (43%), Gaps = 37/523 (7%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP--- 131
            R  K+++    L RM   G  P+ V  T L+   CKA  +K+A+K    +   G++    
Sbjct: 482  RMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPV 541

Query: 132  --------------------------------DASSYTYLVNCLCKKGNVGYAMQLVEKM 159
                                            D+ S+  +++  C +GN+  A  + + M
Sbjct: 542  IHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDM 601

Query: 160  EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
              YGY  N  TY +L+RGLC  G+L Q+ QF+  L+      +  T++ LL    +   +
Sbjct: 602  VRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTL 661

Query: 220  HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
              A+ L + +I     P++ +Y +LL+G C++G+   A+   + +  KG  P+ V+Y  L
Sbjct: 662  DEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCL 721

Query: 280  LRSLCMEGRWEEANELLAEMDGGD-RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
            L  L  EG+ + A+ +  E+   +      + YN L+         +   +++ +M +  
Sbjct: 722  LNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNE 781

Query: 339  FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
              P++ASYN ++      G+    +     M  +  +P+  TY  L + L   G +  A 
Sbjct: 782  VYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAV 841

Query: 398  AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
              ++ +  +     +  +  +IT+   K K + A Q+   M     +P S T+S++I GL
Sbjct: 842  KFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGL 901

Query: 458  CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
              +G ++ + ++   M +   +P+  ++ AL+   C+    D +  + + M   G +P E
Sbjct: 902  IRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAE 961

Query: 518  TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
               + ++ G+    +LE +  V   +    +V   A    +M 
Sbjct: 962  VAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMH 1004



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 166/361 (45%), Gaps = 14/361 (3%)

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGV---HAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           L R I +    N   +  L++A  KER V     A+  +DD    G K + VS N +L  
Sbjct: 144 LLRTISRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDC---GFKASPVSCNTILNA 200

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           L +EG ++    F R+  ++ F   V + NILL SLC  G + +A ++L +M     S +
Sbjct: 201 LVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNS 260

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            VTYN ++      G+   AL VL++M +   +    +YN +I +LC   +       L 
Sbjct: 261 -VTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLK 319

Query: 368 QMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLC 423
           +M      P+E TYN L  + G    GK+  A  +   +  +QN  P    Y  +I   C
Sbjct: 320 RMRKDDLTPDECTYNTL--INGFFREGKINHARYVFNHML-RQNLVPSVATYTTMIDGYC 376

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R  +  +A  +L EM   G  P   TYS+L+ G C   ++  A+ +   ++      +  
Sbjct: 377 RNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKT 436

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
               L+ G C+      + ++ + M E G  P+  TY+ L+ G+    ++  + E+L  +
Sbjct: 437 MRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRM 496

Query: 544 Q 544
           Q
Sbjct: 497 Q 497



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 152/347 (43%), Gaps = 22/347 (6%)

Query: 222 AMKLLDDIIAKGGKPNLV-SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE---------- 270
           A+K+L  I+ + G   +   Y + +  L +     +A+   + L   GF           
Sbjct: 87  ALKILSSIVERSGLDRITYVYCMAVPILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLR 146

Query: 271 -------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
                   N V + +L+++   E +  +A   +  MD      + V+ N ++ +L   G+
Sbjct: 147 TISRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGE 206

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-PNEGTYN 382
           + H    L E +  +F     + N ++  LC+ G+       L +M  + C   N  TYN
Sbjct: 207 SKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM--KSCHISNSVTYN 264

Query: 383 G-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             L      G+ + A  +++ +      +    Y  +I  LCR  ++ +AF LL  M K 
Sbjct: 265 TILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKD 324

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
             TPD  TY++LI G   EG I  A  +F  M   +  P V  +  ++ G C++RR D +
Sbjct: 325 DLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKA 384

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           L +   M   G MP+E TY+ L+ G      L  +  ++++L+ R +
Sbjct: 385 LSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGI 431



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 88/166 (53%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            + + R  +++ AF   E M + G  P  V  ++++  LC+  K+++A+ V   M+ SG++
Sbjct: 934  NAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMV 993

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P  +++T L++ LCK+  +  A+ L   ME      + V+YN L+ GLC   +++ +L  
Sbjct: 994  PTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDL 1053

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
               +  KGL PN  TY  L  A Y    V    +LL+DI  +G  P
Sbjct: 1054 YGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 207/426 (48%), Gaps = 6/426 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDASS 135
           H+ +  F  L     KG   + V  T L+  L   NK+K A+ + + +V   I  P+   
Sbjct: 121 HRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVM 180

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  ++N LCKKG+   A  L+  ME      NT TY  ++   C  G L+ +   L+ + 
Sbjct: 181 YGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMK 240

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           QK + P+ FTYS L++A  K         L  ++I     PN+ ++N ++ GLCKEG+ E
Sbjct: 241 QKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVE 300

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A    R +  KG +P+V++YN+++    + G+ + A E+   M      P I++YNILI
Sbjct: 301 DAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILI 360

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
              A   K D A++V  E+ +   +PS  + N ++  L   G+        D+M      
Sbjct: 361 NGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHI 420

Query: 376 PNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           P+   Y    +L G    G V+EA +    L  ++  +  + Y  VI  LC+ GK  +A 
Sbjct: 421 PD--LYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAH 478

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
               ++   G  PD  TY+++I G C EGL++EA ++   ME+     D   +N ++ G 
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538

Query: 493 CKSRRT 498
            +S + 
Sbjct: 539 LRSNKV 544



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 216/472 (45%), Gaps = 10/472 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DAF    +MV     P V   + LL  +         + +   +    I       + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 139 LVN--CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           +VN  CL  + ++G+++  +   +  G P N VT+ +L+RGL     +  ++    +L++
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKK--GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170

Query: 197 KGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + +  PN   Y  ++    K+     A  LL  +     KPN  +Y +++   CK+G  +
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A     ++  K   P++ +Y+ L+ +LC   +WE    L  EM   +  P + T+N +I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   GK + A +++  M++    P   +YN II      G+VD   +  D M ++  +
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350

Query: 376 PNEGTYNGLAMLCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           P+  +YN   ++ G     K+ EA  + + +  K           ++  L   G+T  A 
Sbjct: 351 PDIISYN--ILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
               EM   G  PD YT+ +L+ G    GL+EEA+  F  +E      ++  + A++ GL
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           CK+ + D +   F+ +   G  P+  TYT ++ G   +  L+ + ++L++++
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 169/352 (48%), Gaps = 2/352 (0%)

Query: 60  TKPN-RKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI 118
           TKPN R      D   +D  L+ A   L  M  K   PD+   + L+  LCK ++ +   
Sbjct: 209 TKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVR 268

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
            +   M+   I P+  ++  +++ LCK+G V  A +++  M + G   + +TYN ++ G 
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
            + G ++++ +  D +I K + P+  +Y+ L+    +++ +  AM++  +I  KG KP++
Sbjct: 329 GLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSI 388

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+ NVLL GL + GRT+ A  FF ++ S G  P++ ++  LL      G  EEA     +
Sbjct: 389 VTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK 448

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           ++       I  Y  +I  L  +GK D A    +++      P   +Y  +I+  C EG 
Sbjct: 449 LERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGL 508

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
           +D     L +M    C  +  TYN +        KV E  A ++ +  K  S
Sbjct: 509 LDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFS 560



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 176/375 (46%), Gaps = 3/375 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L  M     KP+    T ++   CK   +  A  ++  M    I PD  +Y+ L++
Sbjct: 197 AFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK         L  +M       N  T+NS++ GLC  G +  + + +  +I+KG+ P
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP 316

Query: 202 NAFTYSFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           +  TY+ +++  Y  RG V  A ++ D +I K  +P+++SYN+L+ G  ++ + +EA++ 
Sbjct: 317 DVITYNMIIDG-YGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQV 375

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            R++  KG +P++V+ N+LL  L   GR + A     EM      P + T+  L+G    
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           +G  + A+    ++ + R   +   Y  +I  LC  GK+D      +++      P+  T
Sbjct: 436 NGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVIT 495

Query: 381 YNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  + +  C  G + EA  +++ + +    +    Y  ++    R  K  +    L E+ 
Sbjct: 496 YTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIA 555

Query: 440 KYGFTPDSYTYSSLI 454
              F+ ++ T   L+
Sbjct: 556 GKSFSFEAATVELLM 570



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 129/271 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ DA   +  M+ KG  PDV+    ++       ++ +A ++ + M++  I PD  
Sbjct: 295 KEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDII 354

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+N   ++  +  AMQ+  ++   G   + VT N L+ GL  LG    +  F D +
Sbjct: 355 SYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEM 414

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G +P+ +T+  LL   +K   V  AM     +  +    N+  Y  ++ GLCK G+ 
Sbjct: 415 LSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKL 474

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A   F  LP  G  P+V++Y  ++   C EG  +EA ++L +M+         TYN++
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVI 534

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +       K       L+E+    F   AA+
Sbjct: 535 VRGFLRSNKVSEMKAFLEEIAGKSFSFEAAT 565



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 96/206 (46%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+++A      +  KG KP +V    LL+ L +  + K A    + M+S+G IPD  
Sbjct: 365 RQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLY 424

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+    K G V  AM    K+E     TN   Y +++ GLC  G L+++    ++L
Sbjct: 425 THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKL 484

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GL P+  TY+ ++    +E  +  A  +L  +   G   +  +YNV++ G  +  + 
Sbjct: 485 PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKV 544

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL 280
            E   F  ++  K F     +  +L+
Sbjct: 545 SEMKAFLEEIAGKSFSFEAATVELLM 570



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F +LER   +    ++   T ++  LCK  K+ KA    E +   G+ PD  +YT +++ 
Sbjct: 446 FHKLER---RREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            C++G +  A  ++ KMED G   +  TYN +VRG      +++   FL+ +  K     
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFE 562

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           A T   L++   ++  +   M  +   IA
Sbjct: 563 AATVELLMDIIAEDPSITRKMHWIKLHIA 591


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 215/447 (48%), Gaps = 21/447 (4%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RMV+ G  P+      L+  LCK      A+K+ + M+  GI+P+   YT L++ LC  G
Sbjct: 197 RMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAG 256

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A+QL+  M+D G   + VTYN+ + GLC +G +N++ Q L  L   G       YS
Sbjct: 257 KIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYS 316

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++  ++ R           ++ +   P++V Y +++ G  + GR E+A+ F   +  K
Sbjct: 317 CLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF P+   YN +L+ LC  G  E A+ L +EM   +      T  I+I  L   G  D A
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           +++ DEM +    P+  +YN +I     EG+++        +FH+    N          
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEA----RMLFHKMEMGN---------- 482

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
                   +  +  +LG  Q    +   K ++  +C+ G+  +A++LL  +   G  PD 
Sbjct: 483 ------NPSLFLRLTLGANQVCDSESLRK-LVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY++LI GLC    ++ A+ +F  ++     PD   +  L+ GL ++ R + ++ +FQ 
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELE 534
           +++ G  P+ + Y  ++  +    +L 
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLS 622



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 200/440 (45%), Gaps = 22/440 (5%)

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
           A +   A++    M      P A  Y  ++  L   G +  A+ L  +M   G   N  T
Sbjct: 150 AGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN L+ GLC  G    +L+  D ++ +G++PN   Y+ LL +      +  A++LL  + 
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK 269

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            KG  P+ V+YN  L+GLCK GR  EA +    L   GF   +  Y+ L+  L    R++
Sbjct: 270 DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           E       M   + SP +V Y I+I   A  G+ + AL  LD M K  F P    YN ++
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQ 407
             LC  G ++       +M       +  T     M+CG+   G V EA  I   +G   
Sbjct: 390 KVLCDHGDLERAHTLRSEMLQNNLVLDSTTQT--IMICGLCKRGLVDEAMQIFDEMGEHG 447

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP--------------DSYTYSSL 453
                  Y  +I    R+G+  +A  L ++M + G  P              DS +   L
Sbjct: 448 CDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKL 506

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           +  +C  G + +A ++   + +    PDV  +N L+ GLCK+R  D ++ +F+ +  KG 
Sbjct: 507 VHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGI 566

Query: 514 MPNETTYTILVEGI--AHQD 531
            P+E TY  L++G+  AH++
Sbjct: 567 SPDEITYGTLIDGLLRAHRE 586



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 130/537 (24%), Positives = 230/537 (42%), Gaps = 57/537 (10%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA    + M+ +G  P+V   T LL  LC A K+ +A++++  M   G +PD  +Y   +
Sbjct: 225 DALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFL 284

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPT---------------------------------- 166
           + LCK G V  A Q +  ++D G+                                    
Sbjct: 285 SGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNIS 344

Query: 167 -NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            + V Y  ++RG    G +  +L FLD + +KG VP+ F Y+ +L+       +  A  L
Sbjct: 345 PDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTL 404

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
             +++      +  +  +++ GLCK G  +EA++ F ++   G +P V++YN L+     
Sbjct: 405 RSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYR 464

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNI-------------LIGSLAYHGKTDHALKVLD 332
           EGR EEA  L  +M+ G+     +   +             L+  +   G+   A K+L 
Sbjct: 465 EGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLR 524

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
            ++     P   +YN +I  LC    +D  V+   ++  +   P+E TY  L   L    
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL--YEMTKYGFTPDSYT 449
           +  +A  + Q++    +S     Y  ++ SLCR  K  QA  L   Y   KY F  +S  
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEV 644

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
            ++  + +    L +   E+  + +EY Y    + +   L+GLC+ RRTD +L +F  + 
Sbjct: 645 LANAHKEIEDGSLDDGVRELIKIDQEYGYISS-NPYTIWLIGLCQVRRTDDALRIFHTLQ 703

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVL-----KELQLRQVVSESAVERLVMQY 561
           E G         +L+  +     L  + +++     K + L Q V    +  L + Y
Sbjct: 704 EFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICY 760



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 158/361 (43%), Gaps = 36/361 (9%)

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A    L D  A G   +  ++  L+      GR  +A++ F  +      P    YN +L
Sbjct: 120 AMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTIL 179

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           ++L   G    A  L   M     +P   TYN+L+  L   G    ALK+ DEM+     
Sbjct: 180 KALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIM 239

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAF-- 397
           P+   Y  +++ LC+ GK+D  V+ L  M  + C P+E TYN  L+ LC VG+V EAF  
Sbjct: 240 PNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQR 299

Query: 398 -AIIQ----SLGNK---------------------------QNSSPQ-EFYKYVITSLCR 424
             ++Q    +LG K                           +N SP    Y  +I     
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAE 359

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G+   A   L  M K GF PD++ Y+++++ LC  G +E A  +   M + +   D   
Sbjct: 360 AGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT 419

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              ++ GLCK    D ++++F  M E G  P   TY  L++G   +  LE +  +  +++
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479

Query: 545 L 545
           +
Sbjct: 480 M 480



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 5/290 (1%)

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           L S+    + VS  + L S   E  ++     LA+        +   +  L+ + +  G+
Sbjct: 97  LRSRPLHAHAVSLLLRLSSHADEAMFDA----LADARAAGLPASSSAFAALVAAHSSAGR 152

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              A++    M + + RP+A  YN I+  L   G + L +   ++M    C PN  TYN 
Sbjct: 153 HADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNV 212

Query: 384 LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L   LC  G   +A  +   + ++      + Y  +++SLC  GK  +A QLL  M   G
Sbjct: 213 LMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKG 272

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD  TY++ + GLC  G + EA +  V++++  +   +  ++ L+ GL ++RR D   
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGF 332

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             ++ M+E+   P+   YTI++ G A    +E +   L  ++ +  V ++
Sbjct: 333 GYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDT 382



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 39/271 (14%)

Query: 65  KPGNNNDTRHRDHKL---NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM 121
           + G   + R   HK+   N+  L L   +      D      L++D+C++ ++ KA K++
Sbjct: 464 REGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLL 523

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
             ++ SG++PD  +Y  L+N LCK  N+  A++L ++++  G   + +TY +L+ GL   
Sbjct: 524 RSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRA 583

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK--------- 232
              N ++     ++Q G  P+   Y+ ++ +  + + +  A+ L  D + K         
Sbjct: 584 HRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESE 643

Query: 233 ---------------GGKPNLVS------------YNVLLTGLCKEGRTEEAIRFFRDLP 265
                           G   L+             Y + L GLC+  RT++A+R F  L 
Sbjct: 644 VLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQ 703

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
             G +       +L+  LC +     A +++
Sbjct: 704 EFGIDITPACCALLINYLCWDRNLNAAVDIM 734


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 219/462 (47%), Gaps = 39/462 (8%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L  + M   G  P+V     L+  LC+ N++  A K+++ M   G  PD  +Y  +V+ L
Sbjct: 145 LVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVL 204

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK   +  A +++  M     P    +YN++V  LC    + +    +  ++ +GL PN 
Sbjct: 205 CKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNV 259

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ +++A  K   +  A  +L  ++  G  PN+V++  L+ GL  +GR  +A+  +R 
Sbjct: 260 ITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW 319

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + ++G+ P+ VSYNIL+R LC  G  + A+ +L  M+     P + TY+ LI   +  G 
Sbjct: 320 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 379

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              A+ + ++M +   +P+   Y  ++   C +   +     +D+M    C PN  T+N 
Sbjct: 380 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 439

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L                                  I SLC   +  +A  + +EM ++G 
Sbjct: 440 L----------------------------------IRSLCDCRRVGRALGVFHEMRRHGC 465

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+  TY+ LI GL  EG   +AL +   M+ +  +  +  +N ++ GLC++R +  ++ 
Sbjct: 466 VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMV 525

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
               MI +G  PN  T++ ++     + E+ ++A +L  + +
Sbjct: 526 FVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNV 567



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 207/454 (45%), Gaps = 6/454 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +++++  A   L+ M  KG  PD V    ++  LCK +++ +A +V+  M      P A+
Sbjct: 171 QNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAA 225

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +V  LC++  +     +V  M   G   N +TY ++V   C  G L  +   L R+
Sbjct: 226 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 285

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  PN  T++ L+   + +  VH A+ +   ++A+G  P+ VSYN+L+ GLC  G  
Sbjct: 286 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 345

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A      +   G  PNV +Y+ L+      G    A  +  +M      P +V Y  +
Sbjct: 346 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNM 405

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +         + A  ++D+M+     P+  ++N +I  LC   +V   +    +M    C
Sbjct: 406 VDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC 465

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN L   L   G   +A  ++  + +         Y  V++ LC+   + +A  
Sbjct: 466 VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMV 525

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            + +M   G  P+++T+S++I   C EG +  A  +   M   +   ++  +  L+  LC
Sbjct: 526 FVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELC 585

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
              +   ++     M+ +G  PN  T+ +LV G+
Sbjct: 586 NQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 6/278 (2%)

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C E      +  + ++   G  PNV +YN+L+R+LC   R   A ++L EM      P  
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VTY  ++  L    + D A +VL  M      P AASYN I+  LC E ++  V   +  
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSD 249

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M  R  +PN  TY  +    C  G+++ A AI+  +     +     +  ++  L   G+
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
            + A  +   M   G+ P + +Y+ LIRGLC  G ++ A  I   ME++   P+V  ++ 
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           L+ G  K+     ++ ++  M   G  PN   YT +V+
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD 407



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 71/144 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+    DA   +  M S G +  +V    ++  LC+    ++A+  +  M+  GI P+A 
Sbjct: 481 REGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAF 540

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +++ +++  CK+G V  A  ++  M       N + Y  L+  LC    L  ++ +L ++
Sbjct: 541 TFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKM 600

Query: 195 IQKGLVPNAFTYSFLLEAAYKERG 218
           + +G+ PN  T++ L+   ++  G
Sbjct: 601 LYEGIYPNTVTWNVLVRGVFRNLG 624


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 227/458 (49%), Gaps = 5/458 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+ KG +P  +    ++   C+ +++     ++ +M      PD  ++  L+N  C  G 
Sbjct: 238 MIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGR 297

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+  +  M   G   +  T+ +++  LC  GN+ ++ +  D +   G+ PNA  Y+ 
Sbjct: 298 TWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNT 357

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++  +K R V  A  L +++   G  P+ V++N+L+ G  K GR E++ R  +DL   G
Sbjct: 358 LMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSG 417

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
              +   Y++++ SLC  GR +EA +LL E+     + ++V +N LIG+ +  G  D A 
Sbjct: 418 LFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAF 477

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
           +    MV+  F PS+++ N ++  LC +G +      L +M  +    N+  Y    +L 
Sbjct: 478 EAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYT--VLLD 535

Query: 389 GVGKVQ--EAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
           G  K+   E    +     ++   P    +  +I  L + G   +A+++  EM+  GF P
Sbjct: 536 GYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVP 595

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +++ Y+SLIRGLC  G + EAL++   M +     D   FN ++ G C+  +   ++E F
Sbjct: 596 NNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETF 655

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             M   G +P+  T+ IL+ G     ++  + E++ ++
Sbjct: 656 LDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKM 693



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 214/461 (46%), Gaps = 6/461 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MV  G +P V   T +L+ LC+   + +A K+ + +   GI P+A+ Y  L++   K
Sbjct: 305 LHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFK 364

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              V  A  L E+M   G   + VT+N LV G    G +  S + L  LI  GL  ++  
Sbjct: 365 AREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSL 424

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  ++ +      +  AMKLL +++ KG   ++V++N L+    + G  ++A   +R + 
Sbjct: 425 YDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMV 484

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             GF P+  + N LL  LC +G  +EA  LL  M         V Y +L+         +
Sbjct: 485 RCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLE 544

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  +  EM +    P A ++  +I  L   G V+   +   +M      PN   YN L 
Sbjct: 545 GAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLI 604

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  G+V EA  + + +  K   S    +  +I   CR+G+   A +   +M + G  
Sbjct: 605 RGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLL 664

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD +T++ LI G C    +  A EI   M      PD+  +N  + G C+ R+ + ++ +
Sbjct: 665 PDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVII 724

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE----LSAEVLK 541
              +I  G +P+  TY  ++ GI   D L+    L+A++LK
Sbjct: 725 LDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLK 764



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 219/465 (47%), Gaps = 1/465 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A   L  M   G +P +   T LL  L +        K+ + M+  G  P   ++  ++
Sbjct: 195 EALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMI 254

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
              C++  V     L+  M  +    + VT+N L+   C+ G    ++ +L  +++ G+ 
Sbjct: 255 CGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVE 314

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  T++ +L A  +E  V  A KL D I   G  PN   YN L+ G  K     +A   
Sbjct: 315 PSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLL 374

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           + ++ + G  P+ V++NIL+      GR E+++ LL ++           Y++++ SL +
Sbjct: 375 YEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCW 434

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+ D A+K+L E+++     S  ++N +I      G  D   +    M      P+  T
Sbjct: 435 AGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSST 494

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
            N L M LC  G +QEA  ++  +  K     +  Y  ++    +      A  L  EM 
Sbjct: 495 CNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMK 554

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G  PD+  +++LI GL   G +EEA E+F+ M    + P+   +N+L+ GLC   R  
Sbjct: 555 ERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVT 614

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +L++ + M +KG + +  T+ I+++G   + +++ + E   ++Q
Sbjct: 615 EALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQ 659



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 224/472 (47%), Gaps = 13/472 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++  A L  E M + G  PD V    L++   K  +++ + ++++ ++ SG+ 
Sbjct: 360 DGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLF 419

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D+S Y  +V+ LC  G +  AM+L++++ + G   + V +NSL+      G  +++ + 
Sbjct: 420 LDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEA 479

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +++ G  P++ T + LL    ++  +  A  LL  ++ KG   N V+Y VLL G  K
Sbjct: 480 YRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFK 539

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
               E A   ++++  +G  P+ V++  L+  L   G  EEA E+  EM      P    
Sbjct: 540 MNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFA 599

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  L   G+   ALK+  EM +        ++N II   C  G++   ++    M 
Sbjct: 600 YNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQ 659

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS--LGNKQNSSPQE----FYKYVITSLCR 424
                P+  T+N L     +G   +AF ++ +  + NK  S   +     Y   +   CR
Sbjct: 660 RIGLLPDIFTFNIL-----IGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCR 714

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
             K  QA  +L ++   G  PD+ TY++++ G+C + +++ A+ +   + +  + P+V  
Sbjct: 715 MRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMGFIPNVIT 773

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA-HQDELEL 535
            N LL   CK    + +L   Q + E     +E +Y IL +     QD++EL
Sbjct: 774 TNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYCLMQDDVEL 825



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 185/391 (47%), Gaps = 1/391 (0%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           Y ++    N+L+RG   +G   ++L+ L  +   G+ P   + + LL    +     +  
Sbjct: 173 YESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVW 232

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           KL  D+I KG +P+ +++N ++ G C++ R          +P     P+VV++NIL+ + 
Sbjct: 233 KLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINAC 292

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C+ GR   A + L  M      P++ T+  ++ +L   G    A K+ D +      P+A
Sbjct: 293 CIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNA 352

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
           A YN ++       +V       ++M      P+  T+N L       G+++++  +++ 
Sbjct: 353 AIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKD 412

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           L           Y  +++SLC  G+  +A +LL E+ + G T     ++SLI      GL
Sbjct: 413 LIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGL 472

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            ++A E + +M    + P     N+LL+GLC+      +  +   M+EKG   N+  YT+
Sbjct: 473 EDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTV 532

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           L++G    + LE +  + KE++ R +  ++ 
Sbjct: 533 LLDGYFKMNNLEGAQFLWKEMKERGIYPDAV 563



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 67/143 (46%)

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G     ++L  +M   G  P + T++++I G C +  +     +  +M ++   PDV  F
Sbjct: 226 GDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTF 285

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           N L+   C   RT ++++   +M+  G  P+  T+T ++  +  +  +  + ++   +Q 
Sbjct: 286 NILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQD 345

Query: 546 RQVVSESAVERLVMQYDFEGIEV 568
             +   +A+   +M   F+  EV
Sbjct: 346 MGIAPNAAIYNTLMDGYFKAREV 368


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 213/456 (46%), Gaps = 10/456 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +++ A   L+ M  KG  PD V    ++  +CK  ++++A   +     +  +P  +
Sbjct: 116 QNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL-----AETVPVQA 170

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +V+ LC +  +     +V +M   G   N VTY ++V   C    L  +   L R+
Sbjct: 171 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 230

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  PN  T++ L++  +++  VH A+ +   ++ +G  P+ +SYNVL+ GLC  G  
Sbjct: 231 VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 290

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+ FF  +      PN  +Y+ L+      G  + A  +  EM      P +V Y  +
Sbjct: 291 KGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNM 350

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L      D A  ++D+M+     P+  ++N +I RLC  G+V   +     M    C
Sbjct: 351 IDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGC 410

Query: 375 KPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            PN+ TYN L  L G+   G  ++AFA++  + N         Y  VI  LC+      A
Sbjct: 411 HPNDRTYNEL--LHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHA 468

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             LL  M   G  PD++T++++I   C EG +  A  +   M   +   +V  +  L+  
Sbjct: 469 MLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISE 528

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           LC   +   ++     M+ +G  PNE T+ +LV  I
Sbjct: 529 LCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 224/485 (46%), Gaps = 14/485 (2%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M   G  P+V     L+  LC+ +++  A K+++ M   G  PD  S+  +V+ +CK 
Sbjct: 93  DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 152

Query: 147 GNVGYAMQLVEKMEDYGYPTNTV----TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           G V          E  G+   TV    +YN++V  LC    + +    ++ ++Q+GL PN
Sbjct: 153 GRVE---------EARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPN 203

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ +++A  K R +  A  +L  +++ G  PN++++  L+ G  ++G+  +A+  + 
Sbjct: 204 VVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWH 263

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  +G+ P+ +SYN+L+R LC  G  + A +    M      P   TY+ L+   +  G
Sbjct: 264 WMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAG 323

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             D A+ + +EM     +P+   Y  +I  LC +   D     +D+M    C PN  T+N
Sbjct: 324 DLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFN 383

Query: 383 GL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L   LC  G+V  A  +   +           Y  ++  L R+G    AF ++ EM   
Sbjct: 384 TLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNN 443

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           GF     TY+++I  LC   + + A+ +   M     +PD   FNA++   CK  +  ++
Sbjct: 444 GFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIA 503

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
             +   M       N   YTIL+  + +Q +L  +   L ++    +    A   ++++ 
Sbjct: 504 ACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRA 563

Query: 562 DFEGI 566
            F  I
Sbjct: 564 IFTNI 568



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 164/381 (43%), Gaps = 45/381 (11%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P    Y+ LL+A  +E  V A + + D++   G  PN+ +YN+L+  LC+  R + A + 
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++  KG  P+ VS+  ++  +C  GR EEA   LAE       P   +YN ++ +L  
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAE-----TVPVQASYNAVVHALCG 181

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             +      V++EMV+   +P+  +Y  I+   C   ++ +    L +M    C PN  T
Sbjct: 182 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 241

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           +  L       GKV +A ++   + ++  +     Y  +I  LC  G    A      M 
Sbjct: 242 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 301

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV----------------- 482
           +    P++ TYS+L+ G    G ++ A+ I+  M+    KP+V                 
Sbjct: 302 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 361

Query: 483 -----------DN-------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
                      DN       FN L+  LC   R   +L VF  M   G  PN+ TY  L+
Sbjct: 362 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 421

Query: 525 EGI----AHQDELELSAEVLK 541
            G+     H+D   +  E+L 
Sbjct: 422 HGLFREGNHKDAFAMVIEMLN 442



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 143/297 (48%), Gaps = 7/297 (2%)

Query: 250 KEGRTEEAIR-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           + G  + A++ F+R       +P V  YN LL +L  E        +   M      P +
Sbjct: 45  RAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNV 104

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            TYN+LI +L  + + D A K+LDEM +    P   S+  I++ +C  G+V+       +
Sbjct: 105 YTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA-----R 159

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
            F     P + +YN +   LCG  ++ E F+++  +  +        Y  ++ + C+  +
Sbjct: 160 GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 219

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A  +L  M   G TP+  T+++L++G   +G + +AL ++  M +  + P   ++N 
Sbjct: 220 LRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNV 279

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           L+ GLC       +L+ F  M     +PN TTY+ LV+G ++  +L+ +  +  E++
Sbjct: 280 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 336



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 2/158 (1%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R  +HK  DAF  +  M++ G +  +V    ++  LC+    K A+ ++  M+  GI PD
Sbjct: 426 REGNHK--DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPD 483

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           A ++  +++  CK+G V  A  L+ +M     P N V Y  L+  LC  G L+ ++ +L 
Sbjct: 484 AFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLL 543

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           +++ +G+ PN  T++ L+ A +   G    + L   I+
Sbjct: 544 KMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIV 581



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 77/174 (44%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P+      LL+ L +    K A  ++  M+++G      +Y  ++NCLC+   
Sbjct: 405 MRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCM 464

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
             +AM L+ +M   G   +  T+N+++   C  G ++ +   L ++       N   Y+ 
Sbjct: 465 RKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTI 524

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           L+     +  +  AM  L  ++ +G  PN  ++NVL+  +     T   I  F+
Sbjct: 525 LISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFK 578



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 1/144 (0%)

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGF-TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           I +  R G   +A +  Y  +  G   P    Y+ L+  L  E ++   + ++  M +  
Sbjct: 40  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             P+V  +N L+  LC++ R D + ++   M  KG  P+E ++  +V G+     +E + 
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 159

Query: 538 EVLKELQLRQVVSESAVERLVMQY 561
             L E    Q    + V  L  ++
Sbjct: 160 GFLAETVPVQASYNAVVHALCGEF 183


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 204/434 (47%), Gaps = 34/434 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++D   Q  R++   H P +++   +L  L K      AI +   M   GI P+  +   
Sbjct: 46  VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNI 105

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NC C  G + ++  ++ K+   GY  +T+T N+L++GLC+ G + +SL F D+++ +G
Sbjct: 106 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG 165

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N  +Y  LL    K      A+KLL  I  +  +P++V Y+ ++ GLCK+    +A 
Sbjct: 166 FQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAY 225

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            FF ++ ++G  PNV++Y+ L+   C+ G+   A  LL EM   + +P + TYNILI +L
Sbjct: 226 DFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDAL 285

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   A K+L EM          +YN ++  LC    +D       +M     +PN+
Sbjct: 286 CKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNK 345

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            TY  L                                  I  LC+ G+   A +L   +
Sbjct: 346 YTYTAL----------------------------------IDGLCKGGRLKNAQKLFQHL 371

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G   D  TY+ +I GLC EG+ ++AL +   ME+    P+   F+ ++  L +    
Sbjct: 372 LVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDEN 431

Query: 499 DLSLEVFQMMIEKG 512
           D + ++   MI KG
Sbjct: 432 DKAEKLLHGMIAKG 445



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 188/411 (45%), Gaps = 36/411 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +  ++  L K  +   A+ L  +ME  G   N VT N L+   C LG +      
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQM------ 116

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
                       AF++S                 +L  I+  G +P+ ++ N L+ GLC 
Sbjct: 117 ------------AFSFS-----------------VLGKILKLGYQPDTITLNTLMKGLCL 147

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +G  + ++ F   + ++GF+ N VSY  LL  LC  G    A +LL  ++     P +V 
Sbjct: 148 KGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVM 207

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ +I  L      + A     EM      P+  +Y+ +I   C  G++      L++M 
Sbjct: 208 YSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMI 267

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +   PN  TYN L   LC  GKV+EA  ++  + +K   +    Y  V+  LC+     
Sbjct: 268 LKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLD 327

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A  L  +M K+G  P+ YTY++LI GLC  G ++ A ++F  +       DV  +N ++
Sbjct: 328 KATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMI 387

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            GLCK    D +L +   M + G +PN  T+ I++  +  +DE + + ++L
Sbjct: 388 SGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLL 438



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 188/383 (49%), Gaps = 3/383 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           ++ ++   +RL+     P    +  +L    K +    A+ L   +  KG +PNLV+ N+
Sbjct: 46  VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNI 105

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C  G+   +      +   G++P+ ++ N L++ LC++G  + +     ++    
Sbjct: 106 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG 165

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
                V+Y  L+  L   G+T  A+K+L  +     RP    Y+ II  LC +  V+   
Sbjct: 166 FQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAY 225

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
               +M  R   PN  TY+ L    C  G++  AF+++  +  K N +P  + Y  +I +
Sbjct: 226 DFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILK-NINPNVYTYNILIDA 284

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC++GK  +A +LL EM   G   D  TY+S++ GLC    +++A  +F+ M+++  +P+
Sbjct: 285 LCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPN 344

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              + AL+ GLCK  R   + ++FQ ++ KG   +  TY +++ G+  +   + +  +  
Sbjct: 345 KYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKS 404

Query: 542 ELQLRQVVSESAVERLVMQYDFE 564
           +++    +  +    ++++  FE
Sbjct: 405 KMEDNGCIPNAVTFDIIIRSLFE 427



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 130/229 (56%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +N A+     M ++G  P+V+  + L++  C A ++  A  ++  M+   I 
Sbjct: 213 DGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNIN 272

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++ LCK+G V  A +L+ +M   G P + VTYNS++ GLC   NL+++   
Sbjct: 273 PNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATAL 332

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++ + G+ PN +TY+ L++   K   +  A KL   ++ KG   ++ +YNV+++GLCK
Sbjct: 333 FMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCK 392

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           EG  ++A+     +   G  PN V+++I++RSL  +   ++A +LL  M
Sbjct: 393 EGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGM 441



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 94/192 (48%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  AF  L  M+ K   P+V     L+  LCK  K+K+A K++  M   G   D  +Y 
Sbjct: 255 QLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYN 314

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK  N+  A  L  KM+ +G   N  TY +L+ GLC  G L  + +    L+ K
Sbjct: 315 SVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVK 374

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +  TY+ ++    KE     A+ +   +   G  PN V++++++  L ++   ++A
Sbjct: 375 GCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKA 434

Query: 258 IRFFRDLPSKGF 269
            +    + +KG 
Sbjct: 435 EKLLHGMIAKGL 446



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 85/163 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L  M  KG   DVV   ++L  LCK+  + KA  +   M   GI 
Sbjct: 283 DALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQ 342

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++ LCK G +  A +L + +   G   +  TYN ++ GLC  G  +++L  
Sbjct: 343 PNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAM 402

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
             ++   G +PNA T+  ++ + +++     A KLL  +IAKG
Sbjct: 403 KSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKG 445



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L+ A     +M   G +P+    T L+  LCK  ++K A K+ + ++  G  
Sbjct: 318 DGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCC 377

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  +++ LCK+G    A+ +  KMED G   N VT++ ++R L      +++ + 
Sbjct: 378 IDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKL 437

Query: 191 LDRLIQKGLV 200
           L  +I KGL+
Sbjct: 438 LHGMIAKGLL 447


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 226/445 (50%), Gaps = 14/445 (3%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           DV     L+  LC   K+ +AI+V + M S  +IPD  +Y  L++   K        +L+
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 157 EKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           E+M+  G    N VT+N +V+     G +N++   + ++++ G+ P+ FTY+ ++    K
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  A +++D++  KG KP++ + N +L  LC E + EEA         +G+  + V+
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+       + ++A +L  EM      P++V+YN LI  L   GKTD A+  L+E++
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           +    P   S N II   C EG VD   +  ++M     KP+  T N L   LC V  ++
Sbjct: 376 EKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLE 435

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +AF +  S  +KQNS     Y  +I+ LC++G+  +AF L+ +M    F PD YTY++++
Sbjct: 436 KAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIV 495

Query: 455 RGLCMEGLIEEALEIFVVMEE-------YDYKPDVDNFNALLLG-----LCKSRRTDLSL 502
           R L   G  EEA +    + E       +D   ++D  + ++       LC   +   ++
Sbjct: 496 RALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAM 555

Query: 503 EVFQMMIEKGQMPNETTYTILVEGI 527
           ++FQ   +KG   N+ TY  L++G 
Sbjct: 556 KLFQESEQKGVSLNKYTYIKLMDGF 580



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 193/413 (46%), Gaps = 35/413 (8%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  +Y  LV  LC +G +  A+++ ++ME      + VTYN+L+ G        +  + L
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 192 DRLIQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + +  +G V PNA T++ +++   KE  ++ A   +  ++  G  P+  +YN ++ G CK
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA R   ++  KG +P++ + N +L +LCME + EEA EL  +          VT
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI       + D ALK+ +EM K    PS  SYNP+I  LC  GK D  V  L+++ 
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            +   P+E + N                                   +I   C +G   +
Sbjct: 376 EKGLVPDEVSCN----------------------------------IIIHGYCWEGMVDK 401

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AFQ   +M    F PD +T + L+RGLC   ++E+A ++F          DV  +N ++ 
Sbjct: 402 AFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMIS 461

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            LCK  R D + ++   M  K   P++ TY  +V  + H    E + + + +L
Sbjct: 462 YLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKL 514



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 196/391 (50%), Gaps = 14/391 (3%)

Query: 81  DAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + F  LE M S+G  +P+ V    ++    K  K+ +A   +  MV SG+ PD  +Y  +
Sbjct: 190 EGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTM 249

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N  CK G +G A +++++M   G   +  T N+++  LCM     ++ +   +  ++G 
Sbjct: 250 INGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGY 309

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           + +  TY  L+   +K +    A+KL +++  +G  P++VSYN L+ GLC  G+T++A+ 
Sbjct: 310 ILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVD 369

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              +L  KG  P+ VS NI++   C EG  ++A +   +M G    P I T NIL+  L 
Sbjct: 370 KLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLC 429

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                + A K+ +  +  +      +YN +I+ LC EG++D     +  M  ++ +P++ 
Sbjct: 430 RVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQY 489

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGN-----KQNSSPQEF-------YKYVITSLCRKG 426
           TYN +   L   G+ +EA   +  L       K + + QE        Y   I+ LC +G
Sbjct: 490 TYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQG 549

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           K  +A +L  E  + G + + YTY  L+ G 
Sbjct: 550 KYKEAMKLFQESEQKGVSLNKYTYIKLMDGF 580



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 180/383 (46%), Gaps = 37/383 (9%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +  TYN+LV+GLC  G ++++++  D +                           ++KL+
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEM--------------------------ESLKLI 169

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEPNVVSYNILLRSLCM 285
                    P++V+YN L+ G  K   + E  R   ++ S+G  EPN V++NI+++    
Sbjct: 170 ---------PDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGK 220

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           EG+  EA++ + +M     SP   TYN +I      GK   A +++DEM +   +P   +
Sbjct: 221 EGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICT 280

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN 405
            N ++  LC E K +   +   +   R    +E TY  L M    GK ++    +     
Sbjct: 281 LNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMK 340

Query: 406 KQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           K+   P    Y  +I  LC  GKT QA   L E+ + G  PD  + + +I G C EG+++
Sbjct: 341 KRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVD 400

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +A +    M    +KPD+   N LL GLC+    + + ++F   I K    +  TY  ++
Sbjct: 401 KAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMI 460

Query: 525 EGIAHQDELELSAEVLKELQLRQ 547
             +  +  L+ + +++ ++++++
Sbjct: 461 SYLCKEGRLDEAFDLMTDMEVKK 483



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 145/298 (48%), Gaps = 38/298 (12%)

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI-GSLAYHGKTDHALKV 330
           +V +YN L++ LC EG+ +EA  +  EM+     P +VTYN LI G   + G T+   ++
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTE-GFRL 194

Query: 331 LDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
           L+EM  +G   P+A ++N ++     EGK++     + +M      P+  TYN +     
Sbjct: 195 LEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTM----- 249

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
                                        I   C+ GK  +AF+++ EM + G  PD  T
Sbjct: 250 -----------------------------INGFCKAGKLGEAFRMMDEMARKGLKPDICT 280

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
            ++++  LCME   EEA E+ V   +  Y  D   +  L++G  K ++ D +L++++ M 
Sbjct: 281 LNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMK 340

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV-SESAVERLVMQYDFEGI 566
           ++G +P+  +Y  L+ G+    + + + + L EL  + +V  E +   ++  Y +EG+
Sbjct: 341 KRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGM 398



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 47/186 (25%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ AF    +MV    KPD+     LL  LC+ + ++KA K+    +S     D  +Y  
Sbjct: 399 VDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNT 458

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI--- 195
           +++ LCK+G +  A  L+  ME   +  +  TYN++VR L   G   ++ +F+ +L    
Sbjct: 459 MISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETG 518

Query: 196 --------------------------------------------QKGLVPNAFTYSFLLE 211
                                                       QKG+  N +TY  L++
Sbjct: 519 QAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMD 578

Query: 212 AAYKER 217
              K R
Sbjct: 579 GFLKRR 584


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 212/421 (50%), Gaps = 4/421 (0%)

Query: 43  RVLASTQVTISPKDSVYTKPNRKP-GNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQA 101
           + L +T     P  S  +K N  P  + + T H ++ ++DA      ++ +   P  ++ 
Sbjct: 33  QFLKNTHFNFIPCSS--SKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEF 90

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
             +L  L K+      + + + M   GI P+  +   L+NC C+ G + +A  +  K+  
Sbjct: 91  NKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 150

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            GY  NT+T+ +L++GLC+ G ++Q+L F D+L+  G   N  +Y  L++   K     A
Sbjct: 151 MGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRA 210

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+ LL  +  K  +PN+V Y+ ++ G+CK+    +A   + ++ SKG  PNVV+Y+ L+ 
Sbjct: 211 ALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 270

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
                G+ ++A +L  +M   +  P + T+NIL+      GK  +ALK++DEM      P
Sbjct: 271 GFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPP 330

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
           +  +Y+ I+  LC   +VD  V  L ++  +  +PN  TY  L   LC  GK+++A  I 
Sbjct: 331 NIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIF 390

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + L  K        Y  +    C+KG   +A  LL +M + G  PD+ TY  +   L  +
Sbjct: 391 EDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKK 450

Query: 461 G 461
           G
Sbjct: 451 G 451



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 192/435 (44%), Gaps = 36/435 (8%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  A+ +   ++     P A  +  ++  L K  +    + L +KME  G   N V  
Sbjct: 66  NDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNC 125

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+   C                Q GL+P AF+                   +   I+ 
Sbjct: 126 NILINCFC----------------QLGLIPFAFS-------------------VFAKILK 150

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G  PN +++  L+ GLC +G+  +A+ F   L + GF+ N +SY  L+  LC  G    
Sbjct: 151 MGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRA 210

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A +LL  +DG    P +V Y+ +I  +      + A  +  EMV     P+  +Y+ +I+
Sbjct: 211 ALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 270

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
              + GK+   V   ++M     KP+  T+N L  + C  GK+  A  ++  + ++    
Sbjct: 271 GFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPP 330

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  ++ +LC+  +  +A  LL ++   G  P+ +TY+ LI GLC  G +E+A  IF
Sbjct: 331 NIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIF 390

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             +    Y   V  +  +  G CK    D +  +   M E G +P+  TY ++   +  +
Sbjct: 391 EDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKK 450

Query: 531 DELELSAEVLKELQL 545
            E +++ ++ +E ++
Sbjct: 451 GENDMAEKLHRECEI 465



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 149/289 (51%), Gaps = 5/289 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +++V+ G + + +    L+  LCK  + + A+ ++  +    + P+   Y+ +++ +CK 
Sbjct: 181 DKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKD 240

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            +V  A  L  +M   G   N VTY++L+ G   +G L  ++   +++I + + P+ +T+
Sbjct: 241 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTF 300

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L++   K   +  A+KL+D++  +G  PN+V+Y+ +L  LCK  R ++A+     L  
Sbjct: 301 NILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKD 360

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  PN+ +Y IL+  LC  G+ E+A  +  ++       T+VTY ++       G  D 
Sbjct: 361 QGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDE 420

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           A  +L +M +    P A +Y  I   L  +G+ D+  K      HR C+
Sbjct: 421 ASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEK-----LHRECE 464



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 122/228 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +NDAF     MVSKG  P+VV  + L+       K+K A+ +   M+S  I 
Sbjct: 235 DGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIK 294

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  LV+  CK G + YA++LV++M D G P N VTY+S++  LC    +++++  
Sbjct: 295 PDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVAL 354

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L +L  +G+ PN  TY+ L++       +  A  + +D++ KG    +V+Y V+  G CK
Sbjct: 355 LTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCK 414

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           +G  +EA      +   G  P+  +Y ++  SL  +G  + A +L  E
Sbjct: 415 KGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 132/248 (53%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L R+  K  +P+VV  + ++  +CK   +  A  +   MVS GI P+  +Y+ L++    
Sbjct: 215 LRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 274

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A+ L  KM       +  T+N LV   C  G ++ +L+ +D +  +G  PN  T
Sbjct: 275 VGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVT 334

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS +L+A  K   V  A+ LL  +  +G +PN+ +Y +L+ GLC  G+ E+A   F DL 
Sbjct: 335 YSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLL 394

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG++  VV+Y ++    C +G ++EA+ LL++M+     P   TY ++  SL   G+ D
Sbjct: 395 VKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGEND 454

Query: 326 HALKVLDE 333
            A K+  E
Sbjct: 455 MAEKLHRE 462



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 167/363 (46%), Gaps = 2/363 (0%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N   YS      +    V  A+ L + ++ +   P  + +N +L  L K       +   
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           + +  +G +PN+V+ NIL+   C  G    A  + A++     +P  +T+  LI  L   
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G+   AL   D++V   F+ +  SY  +I  LC  G+    +  L ++  +  +PN   Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           + +   +C    V +AF +   + +K  S     Y  +I+     GK   A  L  +M  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
               PD YT++ L+   C  G I  AL++   M +    P++  ++++L  LCK+ R D 
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           ++ +   + ++G  PN  TYTIL++G+    +LE +  + ++L ++     + V  +VM 
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKG-YDITVVTYIVMF 409

Query: 561 YDF 563
           Y F
Sbjct: 410 YGF 412



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 1/317 (0%)

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           I     K NL+ Y+   T        ++A+  F  L  +   P  + +N +L SL     
Sbjct: 43  IPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKH 102

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
           +     L  +M+     P +V  NILI      G    A  V  +++K  + P+  ++  
Sbjct: 103 YHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTT 162

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQ 407
           +I  LC +G++   +   D++     + N+ +Y  L   LC VG+ + A  +++ +  K 
Sbjct: 163 LIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKL 222

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                  Y  +I  +C+      AF L  EM   G +P+  TYS+LI G    G +++A+
Sbjct: 223 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAV 282

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++F  M   + KPDV  FN L+   CKS +   +L++   M ++GQ PN  TY+ +++ +
Sbjct: 283 DLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDAL 342

Query: 528 AHQDELELSAEVLKELQ 544
                ++ +  +L +L+
Sbjct: 343 CKTHRVDKAVALLTKLK 359


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 194/409 (47%), Gaps = 35/409 (8%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           LQLE M ++G  P VV    +++ + ++  ++ A      M + G++PD  +Y  L+N  
Sbjct: 324 LQLE-MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGY 382

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK GN+  A+ L   ++  G   + +TYN L+ G C LG+L ++ +F   ++++G  P+ 
Sbjct: 383 CKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDV 442

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ L+  + K R +    +  D++++KG +P+  +YN  ++     G T EA +    
Sbjct: 443 STYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEV 502

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + S+G   + V+YNI L  LC  G  ++A  L  +M      P  +TY  LI +    G+
Sbjct: 503 MISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGR 562

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              A  + D M+     PSA +Y   I   C  G +        +M     +PNE TYN 
Sbjct: 563 LREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNV 622

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L                                  I +LCR G+T  A+Q  +EM + G 
Sbjct: 623 L----------------------------------IHALCRMGRTNLAYQHFHEMLERGL 648

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +P+ YTY+ LI G C EG  EEA+ ++  M ++   PD    NAL  G 
Sbjct: 649 SPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 214/459 (46%), Gaps = 4/459 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS--SGIIPDASSYTYLVNCLCKK 146
           M+  G +P +V    LL    +  ++ +A K++  M +   G +P   +Y  ++N L +K
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARK 281

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A QLV++M       +  T+N L+ G    G++ ++      +  +G+VP   TY
Sbjct: 282 GELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTY 340

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++   ++   V AA     ++ A G  P+L++YN L+ G CK G  +EA+  F DL  
Sbjct: 341 NTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKR 400

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P+V++YNILL   C  G  EEA     EM      P + TY IL+           
Sbjct: 401 AGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAM 460

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLA 385
             +  DEM+    +P   +YN  I+     G      +  + M  R    +  TYN  L 
Sbjct: 461 VREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLD 520

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G +++A+ +   + +         Y  +I + C +G+  +A  +   M   G  P
Sbjct: 521 GLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPP 580

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
            + TY+  I   C  G +  A   F  M E   +P+   +N L+  LC+  RT+L+ + F
Sbjct: 581 SAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHF 640

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             M+E+G  PN+ TYT+L++G   +   E +  +  E+ 
Sbjct: 641 HEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMH 679



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 212/461 (45%), Gaps = 4/461 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P + +   +L  L    +      V   M+  GI P   +Y  L++   ++G 
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR 246

Query: 149 VGYAMQLVEKMEDY--GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           V  A +L+ +ME    G   + VTYN ++ GL   G L ++ Q +DR+ +     +AFT+
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTF 305

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L+   +    V  A  L  ++  +G  P +V+YN ++ G+ + G  E A   F ++ +
Sbjct: 306 NPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA 365

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P++++YN L+   C  G  +EA  L  ++     +P+++TYNIL+      G  + 
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEE 425

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LA 385
           A +   EMV+   +P  ++Y  ++        + +V +  D+M  +  +P+   YN  ++
Sbjct: 426 ARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRIS 485

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
               +G   EAF + + + ++  SS    Y   +  LC+ G    A+ L  +M   G  P
Sbjct: 486 AELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQP 545

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  TY+ LI   C  G + EA +IF  M      P    +   +   C+      +   F
Sbjct: 546 DCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWF 605

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           Q M+E+G  PNE TY +L+  +       L+ +   E+  R
Sbjct: 606 QKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLER 646



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 141/306 (46%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A      +   G  P V+    LL   C+   +++A +  + MV  G  PD S+YT 
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N   K  N+    +  ++M   G   +   YN+ +    +LG+ +++ Q  + +I +G
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +  +  TY+  L+   K   +  A  L   +++ G +P+ ++Y  L+   C+ GR  EA 
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F  +   G  P+ V+Y + + + C  G    A     +M      P  VTYN+LI +L
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+T+ A +   EM++    P+  +Y  +I   C EG  +  ++   +M      P+ 
Sbjct: 628 CRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDH 687

Query: 379 GTYNGL 384
            T+N L
Sbjct: 688 CTHNAL 693



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 140/286 (48%), Gaps = 4/286 (1%)

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           FR++   G  P +   N++LR+L  E RW++   + AEM      P+IVTYN L+ S   
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 321 HGKTDHALKVLDEMVK--GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
            G+ D A K+L EM    G   PS  +YN +I  L  +G+++   + +D+M   + K + 
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASA 302

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            T+N L       G V++A A+   + N+        Y  +I  + R G    A     E
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TY+SLI G C  G ++EAL +F  ++     P V  +N LL G C+   
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + +    Q M+E+G  P+ +TYTIL+ G      L +  E   E+
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEM 468



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 108/204 (52%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           ++AF   E M+S+G   D V     L  LCK+  +K A  +   MVS G+ PD  +YT L
Sbjct: 494 SEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCL 553

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++  C++G +  A  + + M   G P + VTY   +   C  GNL  +  +  +++++G+
Sbjct: 554 IHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGV 613

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PN  TY+ L+ A  +    + A +   +++ +G  PN  +Y +L+ G CKEG  EEAIR
Sbjct: 614 RPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIR 673

Query: 260 FFRDLPSKGFEPNVVSYNILLRSL 283
            + ++   G  P+  ++N L +  
Sbjct: 674 LYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 107/186 (57%), Gaps = 1/186 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA++   +MVS G +PD +  T L++  C+  ++++A  + + M+ SG+ P A +YT 
Sbjct: 528 LKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTV 587

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            ++  C++GN+  A    +KM + G   N VTYN L+  LC +G  N + Q    ++++G
Sbjct: 588 FIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERG 647

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L PN +TY+ L++   KE     A++L  ++   G  P+  ++N L  G   EG+++ AI
Sbjct: 648 LSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF-DEGQSKHAI 706

Query: 259 RFFRDL 264
           ++  ++
Sbjct: 707 QYMENV 712



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 2/131 (1%)

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM  +G  P     + ++R L  E   ++   ++  M +   +P +  +N LL    +  
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245

Query: 497 RTDLSLEVFQMMIEK--GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           R D + ++ + M  +  G +P++ TY +++ G+A + ELE +A+++  +++ +  S    
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTF 305

Query: 555 ERLVMQYDFEG 565
             L+  Y   G
Sbjct: 306 NPLITGYFARG 316


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 214/437 (48%), Gaps = 1/437 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+  +  +E M  KG KP+     +++  LC+  K+ +A +    M+  GI+PD  
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT L++  CK+G++  A +   +M       + +TY +++ G C +G++ ++ +    +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KGL P++ T++ L+    K   +  A ++ + +I  G  PN+V+Y  L+ GLCKEG  
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A     ++   G +PN+ +YN ++  LC  G  EEA +L+ E +    +   VTY  L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + +    G+ D A ++L EM+    +P+  ++N ++   C  G ++   K L+ M  +  
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  T+N L    C    ++ A AI + + ++      + Y+ ++   C+     +A+ 
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM   GF+    TYS LI+G        EA E+F  M       D + F+       
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 712

Query: 494 KSRRTDLSLEVFQMMIE 510
           K +R D  ++    +IE
Sbjct: 713 KGKRPDTIVDPIDEIIE 729



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 223/468 (47%), Gaps = 2/468 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCK-ANKMKKAIKVMEMMVSSGIIPDASSYT 137
           L +A    E+M++ G    V      L  L K   K   AI V       G+  + +SY 
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ +C+ G +  A  L+  ME  GY  + ++Y+++V G C  G L++  + ++ + +K
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN++ Y  ++    +   +  A +   ++I +G  P+ V Y  L+ G CK G    A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +FF ++ S+   P+V++Y  ++   C  G   EA +L  EM      P  VT+  LI  
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A +V + M++    P+  +Y  +I  LC EG +D   + L +M+    +PN
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN +   LC  G ++EA  ++        ++    Y  ++ + C+ G+  +A ++L 
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G  P   T++ L+ G C+ G++E+  ++   M      P+   FN+L+   C   
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               +  +++ M  +G  P+  TY  LV+G      ++ +  + +E++
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 227/463 (49%), Gaps = 1/463 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +++ +C+  ++K+A  ++ +M   G  PD  SY+ +VN  C+ G +    +L+E M+  G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N+  Y S++  LC +  L ++ +    +I++G++P+   Y+ L++   K   + AA 
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           K   ++ ++   P++++Y  +++G C+ G   EA + F ++  KG EP+ V++  L+   
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G  ++A  +   M     SP +VTY  LI  L   G  D A ++L EM K   +P+ 
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            +YN I+  LC  G ++  VK + +        +  TY  L    C  G++ +A  I++ 
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  K        +  ++   C  G      +LL  M   G  P++ T++SL++  C+   
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++ A  I+  M      PD   +  L+ G CK+R    +  +FQ M  KG   + +TY++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
           L++G   + +   + EV  +++   + ++  +        ++G
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 73/137 (53%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  VI  +C+ G+  +A  LL  M   G+TPD  +YS+++ G C  G +++  ++  VM+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               KP+   + +++  LC+  +   + E F  MI +G +P+   YT L++G   + ++ 
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368

Query: 535 LSAEVLKELQLRQVVSE 551
            +++   E+  R +  +
Sbjct: 369 AASKFFYEMHSRDITPD 385



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 63/128 (49%)

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           KT  A  +  E  + G   +  +Y+ +I  +C  G I+EA  + ++ME   Y PDV +++
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++ G C+    D   ++ ++M  KG  PN   Y  ++  +    +L  + E   E+  +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345

Query: 547 QVVSESAV 554
            ++ ++ V
Sbjct: 346 GILPDTVV 353


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 210/442 (47%), Gaps = 44/442 (9%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA  Q  RM+   H P ++Q   +L    K  K    + +   +   GI PD  +   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKM-KHYSTVSLSHRLELKGIQPDLFTLNI 98

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NC C  G + +   ++ K+   GYP +TVT N+L++GLC+ G + ++L F D+L+ +G
Sbjct: 99  LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 158

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N   Y  L+    K     AA+KLL  I  +  KP++V Y+ ++  LCK     EA 
Sbjct: 159 FQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAY 218

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++  KG   +VV+YN L+   C+ G+ +EA  LL  M     +P + TY IL+ +L
Sbjct: 219 GLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDAL 278

Query: 319 AYHGKTDHALK-------VLDEMVKGRFRPS-AASYNPIIARLCSEGKVDLVVKCLDQMF 370
              GK   A +       ++DEM + R +P+   +Y+ +I  LC  G +D  +   ++M 
Sbjct: 279 CKEGKVKEAKRRISYVWDLIDEM-RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 337

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            +  +PN  T+  L                                  +  L + G+   
Sbjct: 338 DQGIRPNMFTFTIL----------------------------------LDGLWKGGRLKD 363

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A ++  ++   G+  + YTY+ +I G C +GL+EEAL +   ME+    P+   F  +++
Sbjct: 364 AQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIII 423

Query: 491 GLCKSRRTDLSLEVFQMMIEKG 512
            L K    D + ++ + MI +G
Sbjct: 424 ALFKKDENDKAEKLLRQMIARG 445



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 176/362 (48%), Gaps = 8/362 (2%)

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           RL  KG+ P+ FT + L+        +     +L  I+ +G  P+ V+ N L+ GLC +G
Sbjct: 83  RLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG 142

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + ++A+ F   L ++GF+ N V Y  L+  +C  G    A +LL ++DG    P +V Y+
Sbjct: 143 QVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYS 202

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            +I +L  +     A  +  EM          +YN +I   C  GK+   +  L+ M  +
Sbjct: 203 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLK 262

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEA-------FAIIQSLGNKQNSSPQEFYKYVITSLCR 424
              P+  TY  L   LC  GKV+EA       + +I  + ++   +    Y  +I  LC+
Sbjct: 263 TINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCK 322

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G   +A  L  +M   G  P+ +T++ L+ GL   G +++A E+F  +    Y  +V  
Sbjct: 323 NGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYT 382

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N ++ G CK    + +L +   M + G +PN  T+  ++  +  +DE + + ++L+++ 
Sbjct: 383 YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMI 442

Query: 545 LR 546
            R
Sbjct: 443 AR 444



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 92/183 (50%)

Query: 51  TISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCK 110
           TI+P    YT            +    +++  +  ++ M  +G   DV+  ++L+  LCK
Sbjct: 263 TINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCK 322

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
              + +AI +   M   GI P+  ++T L++ L K G +  A ++ + +   GY  N  T
Sbjct: 323 NGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYT 382

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN ++ G C  G L ++L  L ++   G +PNAFT+  ++ A +K+     A KLL  +I
Sbjct: 383 YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMI 442

Query: 231 AKG 233
           A+G
Sbjct: 443 ARG 445



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 7/199 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-------VMEMMVSSGII 130
           KL +A   L  MV K   PDV   T L+  LCK  K+K+A +       +++ M   G  
Sbjct: 248 KLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQP 307

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y+ L++ LCK G++  A+ L  KM+D G   N  T+  L+ GL   G L  + + 
Sbjct: 308 ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEV 367

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              L+ KG   N +TY+ ++    K+  +  A+ +L  +   G  PN  ++  ++  L K
Sbjct: 368 FQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFK 427

Query: 251 EGRTEEAIRFFRDLPSKGF 269
           +   ++A +  R + ++G 
Sbjct: 428 KDENDKAEKLLRQMIARGL 446



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 98/226 (43%), Gaps = 2/226 (0%)

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+   + M+  R  P    +N I+    ++ K    V    ++  +  +P+  T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSF-AKMKHYSTVSLSHRLELKGIQPDLFTLNI 98

Query: 384 LA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L    C +G++   F+++  +  +           +I  LC KG+  +A     ++   G
Sbjct: 99  LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 158

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
           F  +   Y +LI G+C  G    A+++   ++    KPDV  ++ ++  LCK +    + 
Sbjct: 159 FQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAY 218

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            +F  M  KG   +  TY  L+ G     +L+ +  +L  + L+ +
Sbjct: 219 GLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTI 264



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 68/126 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+ A     +M  +G +P++   T LL  L K  ++K A +V + +++ G   +  
Sbjct: 322 KNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVY 381

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N  CK+G +  A+ ++ KMED G   N  T+ +++  L      +++ + L ++
Sbjct: 382 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 441

Query: 195 IQKGLV 200
           I +GL+
Sbjct: 442 IARGLL 447



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/134 (18%), Positives = 69/134 (51%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C  G+    F +L ++ K G+ P + T ++LI+GLC++G +++AL     +    
Sbjct: 99  LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 158

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           ++ +   +  L+ G+CK   T  ++++ + +  +   P+   Y+ +++ +     +  + 
Sbjct: 159 FQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAY 218

Query: 538 EVLKELQLRQVVSE 551
            +  E+ ++ + ++
Sbjct: 219 GLFSEMTVKGISAD 232


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/573 (24%), Positives = 248/573 (43%), Gaps = 43/573 (7%)

Query: 31  NLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLN----DAFLQL 86
           ++H F L + F      T   + P  S  T       N +  +  D   N    D  L  
Sbjct: 6   SIHGFPLLRYFALSSNPTHFLLHPSHSSSTFSTYASINTSRAQFLDSLRNVKSVDVALDF 65

Query: 87  -ERMVSKGHKPDVVQATNLLYDL-CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
             +MV+    P  V+  NLL+ +  K      AI +++ M   G+ P+  ++  ++NCLC
Sbjct: 66  YHKMVTMKPFP-CVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLC 124

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           +  +  +   ++  M   G   + VT+ ++V GLC+ GN+ Q+++F+D L   G   + +
Sbjct: 125 RLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRY 184

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T   ++    K     AA+  L  +  +    ++ +YN ++ GLCK+G   EA   F  +
Sbjct: 185 TRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQM 244

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             KG +P++ +YN L+  LC   RW+EA  LLA M      P + T+N++ G     G  
Sbjct: 245 TGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMI 304

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A  +   M          +Y+ II   C   ++   ++  D M  + C PN  TY  L
Sbjct: 305 SRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSL 364

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C +  + +A   +  + N         +  +I   C+ GK   A +L + M K+G 
Sbjct: 365 IHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQ 424

Query: 444 TPDSYT-----------------------------------YSSLIRGLCMEGLIEEALE 468
            PD  T                                   YS ++ G+C  G + +ALE
Sbjct: 425 LPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALE 484

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +F  +     K DV  +N ++ GLCK    D + ++   M E G  P+E TY + V+G+ 
Sbjct: 485 LFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLL 544

Query: 529 HQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            + E+  S + L  ++ +   + +   +L++ Y
Sbjct: 545 RRYEISKSTKYLMFMKGKGFRANATTTKLLINY 577



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 177/367 (48%), Gaps = 8/367 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  + +A+    +M  KG +PD+     L++ LC  ++ K+A  ++  M+  GI+PD  
Sbjct: 230 KDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQ 289

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  +     K G +  A  +   M   G   + VTY+S++   CML  +  +++  D +
Sbjct: 290 TFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLM 349

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+KG +PN  TY+ L+    + + ++ AM  L +++  G  PN+V++N L+ G CK G+ 
Sbjct: 350 IRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKP 409

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F  +   G  P++ +  I+L  L       EA  L  E++  +    I+ Y+I+
Sbjct: 410 VAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSII 469

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  +   GK + AL++   +     +    +YN +I  LC EG +D     L +M    C
Sbjct: 470 LNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGC 529

Query: 375 KPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            P+E TYN    GL     + K  +    ++  G + N++  +    ++ +     K  +
Sbjct: 530 PPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTK----LLINYFSANKENR 585

Query: 431 AFQLLYE 437
           AFQ+  +
Sbjct: 586 AFQVFLQ 592


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 224/469 (47%), Gaps = 42/469 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
             H  + A   L  M+ +GH P      NL+  L ++N   KA  +   +  S ++ DA 
Sbjct: 101 HSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL-KSKVVLDAY 159

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+  ++   C+ G      +L+  +E++G   N V Y +L+ G C  GN+  +     ++
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKM 219

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GLVPN  TYS L+   +K+       ++ +++   G  PN  +YN L++  C  G  
Sbjct: 220 DRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMV 279

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A + F ++  KG    V++YNIL+  LC   ++ EA +L+ +++    SP IVTYNIL
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD---QMFH 371
           I      GK D A+++ +++      P+  +YN +IA      KV+ +   LD   +M  
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIA---GYSKVENLAGALDLVKEMEE 396

Query: 372 RRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           R   P++ TY  L          +AFA                         R   T +A
Sbjct: 397 RCIAPSKVTYTILI---------DAFA-------------------------RLNYTEKA 422

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++   M K G  PD YTYS LI GLC+ G ++EA ++F  + E   +P+   +N ++ G
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            CK   +  +L +   M+  G +PN  ++   + G+  +DE    AE+L
Sbjct: 483 YCKEGSSYRALRLLNEMVHSGMVPNVASFCSTI-GLLCRDEKWKEAELL 530



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 172/391 (43%), Gaps = 34/391 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P+VV  T L+   CK   +  A  +   M   G++P+  +Y+ L+N   K+G     
Sbjct: 188 GLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREG 247

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            Q+ E M+  G   N   YN L+   C  G ++++ +    + +KG+     TY+ L+  
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             + +    A+KL+  +   G  PN+V+YN+L+ G C  G+ + A+R F  L S G  P 
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           +V+YN L+           A +L+ EM+    +P+ VTY ILI + A    T+ A ++  
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHS 427

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
            M K    P   +Y+ +I  LC  G                                   
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGLCVHG----------------------------------N 453

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++EA  + +SLG          Y  +I   C++G +Y+A +LL EM   G  P+  ++ S
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            I  LC +   +EA  +   M     KP V 
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVS 544



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           + F   E M   G  P+      L+ + C    + KA KV   M   GI     +Y  L+
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILI 305

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LC+    G A++LV K+   G   N VTYN L+ G C +G ++ +++  ++L   GL 
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P   TY+ L+    K   +  A+ L+ ++  +   P+ V+Y +L+    +   TE+A   
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEM 425

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G  P+V +Y++L+  LC+ G  +EA++L   +      P  V YN +I     
Sbjct: 426 HSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G +  AL++L+EMV     P+ AS+   I  LC + K       L QM +   KP+   
Sbjct: 486 EGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSL 545

Query: 381 Y 381
           Y
Sbjct: 546 Y 546



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 193/428 (45%), Gaps = 11/428 (2%)

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT--YNSLVRG 177
           ++  ++SSG++P A S    +      G +  ++ L +  + +  P  T T  Y+++V  
Sbjct: 44  ILNHLLSSGMLPQAQSLILRL----ISGRIPSSLML-QLTQAHFTPCLTYTPLYDTIVNA 98

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
                + +Q+L FL  +I +G VP + T++ L+    +      A  + +++ +K    +
Sbjct: 99  YVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKV-VLD 157

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
             S+ +++ G C+ G   +  R    L   G  PNVV Y  L+   C  G    A  L  
Sbjct: 158 AYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFC 217

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +MD     P   TY++L+      G      ++ + M +    P+A +YN +I+  C+ G
Sbjct: 218 KMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGG 277

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-Y 415
            VD   K   +M  +       TYN L   LC   K  EA  ++  + NK   SP    Y
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV-NKVGLSPNIVTY 336

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I   C  GK   A +L  ++   G +P   TY++LI G      +  AL++   MEE
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P    +  L+    +   T+ + E+  +M + G +P+  TY++L+ G+     ++ 
Sbjct: 397 RCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKE 456

Query: 536 SAEVLKEL 543
           ++++ K L
Sbjct: 457 ASKLFKSL 464



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 115/240 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K  +A   + ++   G  P++V    L+   C   KM  A+++   + SSG+ P   
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+    K  N+  A+ LV++ME+     + VTY  L+     L    ++ +    +
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLM 429

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GLVP+ +TYS L+        +  A KL   +     +PN V YN ++ G CKEG +
Sbjct: 430 EKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+R   ++   G  PNV S+   +  LC + +W+EA  LL +M      P++  Y ++
Sbjct: 490 YRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 87/410 (21%), Positives = 161/410 (39%), Gaps = 73/410 (17%)

Query: 152 AMQLVEKMEDYGYPT------NTVTYNSLVRGLCMLGNLNQSLQF-LDRLIQKGLVPNAF 204
           A+ L++KM     PT      NT TY  L        + + S+ F L+ L+  G++P A 
Sbjct: 7   ALILIQKMVKVP-PTKALLLFNTATYQGL-------QHTSHSISFILNHLLSSGMLPQAQ 58

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS---YNVLLTGLCKEGRTEEAIRFF 261
           +    L +            L+  +      P L     Y+ ++        T++A+ F 
Sbjct: 59  SLILRLISG------RIPSSLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFL 112

Query: 262 RDLPSKGFEPNVVSYN----ILLRSLCMEGRWEEANELLAEMDGGDRSPTIV---TYNIL 314
             +  +G  P   ++N    +L+RS   +  W   NEL        +S  ++   ++ I+
Sbjct: 113 HHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL--------KSKVVLDAYSFGIM 164

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G      ++L  + +    P+   Y  +I   C  G V L      +M     
Sbjct: 165 IKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGL 224

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            PN  TY+ L                             F+K        +G   + FQ+
Sbjct: 225 VPNPHTYSVLM--------------------------NGFFK--------QGLQREGFQM 250

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M + G  P++Y Y+ LI   C  G++++A ++F  M E      V  +N L+ GLC+
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            ++   ++++   + + G  PN  TY IL+ G     +++ +  +  +L+
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 231/488 (47%), Gaps = 38/488 (7%)

Query: 94  HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           H P+VV  T ++  LCKA  + +A  V + M+  G+ P+  +YT L++     G     +
Sbjct: 198 HTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVV 257

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA- 212
           Q++++M  +G   +   Y  L+  LC  G   ++    D +I+KG+ PN   Y  LL   
Sbjct: 258 QMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGY 317

Query: 213 ---------------------------------AYKERG-VHAAMKLLDDIIAKGGKPNL 238
                                            AY ++  +  AM + D +  +   PN+
Sbjct: 318 ATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNI 377

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+Y  L+  LCK GR ++A+  F  +  +G  P++  ++ L+  LC   +WE+A EL  E
Sbjct: 378 VTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFE 437

Query: 299 -MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
            +D G R  T V +N L+ +L   G+   A +++D M++   RP   SYN ++   C  G
Sbjct: 438 VLDQGIRLDT-VFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTG 496

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           ++D   K LD +     KP++ TYN L    C   ++ +A+++ + +  K  +     Y 
Sbjct: 497 RIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYN 556

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            ++  L + G+  +A +L   M       + YTY+ +I GLC    ++EA ++F  +   
Sbjct: 557 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK 616

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           D + D+   N ++  L K  R + ++++F  +   G +P+  TY ++ E +  +  LE  
Sbjct: 617 DLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEEL 676

Query: 537 AEVLKELQ 544
            E+   ++
Sbjct: 677 DELFSAME 684



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 233/511 (45%), Gaps = 38/511 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M+ KG +P+    T L++      K K+ +++++ M + G+ PD   Y  L++ LCK
Sbjct: 225 FQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCK 284

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A  + + +   G   N   Y  L+ G    G+L++   FLD ++  G+ P+   
Sbjct: 285 NGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHI 344

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ +  A  K+  +  AM + D +  +   PN+V+Y  L+  LCK GR ++A+  F  + 
Sbjct: 345 FNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMI 404

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKT 324
            +G  P++  ++ L+  LC   +WE+A EL  E +D G R  T V +N L+ +L   G+ 
Sbjct: 405 DEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDT-VFFNTLMCNLCREGRV 463

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A +++D M++   RP   SYN ++   C  G++D   K LD +     KP++ TYN L
Sbjct: 464 MEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTL 523

Query: 385 ---------------------------------AMLCGV---GKVQEAFAIIQSLGNKQN 408
                                             +L G+   G+  EA  +  S+ N + 
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT 583

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y  +I  LC+     +AF++ + +       D +T + +I  L   G  E+A++
Sbjct: 584 QMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMD 643

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +F  +  Y   PDV+ +  +   L K    +   E+F  M E G  PN      LV  + 
Sbjct: 644 LFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703

Query: 529 HQDELELSAEVLKELQLRQVVSESAVERLVM 559
           H+ ++  +   L +L  +    E++   +++
Sbjct: 704 HRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 220/477 (46%), Gaps = 18/477 (3%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA----IKVMEMMV---SSGIIP 131
           LNDA    + M++   +P  V+A N L       +   A    + +   M+   S  + P
Sbjct: 32  LNDALKLFDEMLTHA-RPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAP 90

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN-TVTYNSLVRGLCMLGNLNQSLQ- 189
            + +YT L+ C C+ G + +       +   G+  N TV ++ L++GLC    ++++   
Sbjct: 91  SSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDI 150

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG---KPNLVSYNVLLT 246
            L R+ + G  P+ F+YS LL+    E+    A++LL  +   G     PN+V+Y  ++ 
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           GLCK    + A   F+ +  KG  PN  +Y  L+      G+W+E  ++L EM      P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
               Y +L+  L  +G+   A  + D +++   +P+   Y  ++    +EG +  +   L
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330

Query: 367 DQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
           D M      P+   +N   M C   K   + EA  I   +  ++ S     Y  +I +LC
Sbjct: 331 DLMVGNGVSPDHHIFN--IMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALC 388

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + G+   A     +M   G TPD + +SSL+ GLC     E+A E+F  + +   + D  
Sbjct: 389 KLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTV 448

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            FN L+  LC+  R   +  +  +M+  G  P+  +Y  LV+G      ++ +A++L
Sbjct: 449 FFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLL 505



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 186/367 (50%), Gaps = 4/367 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA L+  +M+ +G  PD+   ++L+Y LC  +K +KA ++   ++  GI  D   + 
Sbjct: 392 RVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFN 451

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC++G V  A +L++ M   G   + ++YN+LV G C+ G ++++ + LD ++  
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+  TY+ LL    K R +  A  L  +++ KG  P++V+YN +L GL + GR  EA
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              +  + +   + N+ +YNI++  LC     +EA ++   +   D    I T NI+IG+
Sbjct: 572 KELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGA 631

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A+ +   +      P   +Y  I   L  EG ++ + +    M      PN
Sbjct: 632 LLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPN 691

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
               N L   L   G +  A A +  L +++N S +     ++ S+  +G+  Q  + L 
Sbjct: 692 SRMLNALVRWLLHRGDINRAGAYLSKL-DEKNFSLEASTTSMLISIYSRGEYQQLAKSLP 750

Query: 437 EMTKYGF 443
           E  KY F
Sbjct: 751 E--KYHF 755



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 189/405 (46%), Gaps = 14/405 (3%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLV----RGLCMLGNLNQSLQFLDRLIQK---GLVPNAF 204
           A++L ++M  +  P +   +N L+    R  C   +    +   +R+I++    + P++F
Sbjct: 35  ALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSAS-ELVVSLFNRMIRECSIKVAPSSF 93

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN-LVSYNVLLTGLCKEGRTEEAIR-FFR 262
           TY+ L+    +   +         I+  G + N  V ++ LL GLC   R +EA     R
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLR 153

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DG-GDRSPTIVTYNILIGSLA 319
            +P  G  P+V SY+ILL+  C E R EEA ELL+ M  DG G  +P +VTY  +I  L 
Sbjct: 154 RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLC 213

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                D A  V   M+    RP+  +Y  +I    S GK   VV+ L +M     +P+  
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCY 273

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            Y  L   LC  G+  EA  I  S+  K        Y  ++     +G   +    L  M
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM 333

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G +PD + ++ +      + +I+EA+ IF  M +    P++  + AL+  LCK  R 
Sbjct: 334 VGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRV 393

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           D ++  F  MI++G  P+   ++ LV G+   D+ E + E+  E+
Sbjct: 394 DDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEV 438



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 187/411 (45%), Gaps = 34/411 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++A    ++M  +   P++V    L+  LCK  ++  A+     M+  G+ PD   ++ 
Sbjct: 358 IDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSS 417

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV  LC       A +L  ++ D G   +TV +N+L+  LC  G + ++ + +D +++ G
Sbjct: 418 LVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVG 477

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+  +Y+ L++       +  A KLLD I++ G KP+ V+YN LL G CK  R ++A 
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAY 537

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  KG  P+VV+YN +L  L   GR+ EA EL   M        I TYNI+I  L
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +   D A K+   +     +    + N +I  L   G+ +      D M         
Sbjct: 598 CKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKE------DAM--------- 642

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
                           + FA I + G   +    E Y  +  +L ++G   +  +L   M
Sbjct: 643 ----------------DLFATISAYGLVPDV---ETYCLIAENLIKEGSLEELDELFSAM 683

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            + G  P+S   ++L+R L   G I  A      ++E ++  +    + L+
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 151/297 (50%), Gaps = 1/297 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ +A   ++ M+  G +PDV+    L+   C   ++ +A K+++++VS G+ PD  
Sbjct: 459 REGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKV 518

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK   +  A  L  +M   G   + VTYN+++ GL   G  +++ +    +
Sbjct: 519 TYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSM 578

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I      N +TY+ ++    K   V  A K+   + +K  + ++ + N+++  L K GR 
Sbjct: 579 INSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRK 638

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+  F  + + G  P+V +Y ++  +L  EG  EE +EL + M+    +P     N L
Sbjct: 639 EDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNAL 698

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           +  L + G  + A   L ++ +  F   A++ + +I+ + S G+   + K L + +H
Sbjct: 699 VRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLIS-IYSRGEYQQLAKSLPEKYH 754


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 223/489 (45%), Gaps = 36/489 (7%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD      ++  L ++ K   A+KV + MV  G++P+  +Y  +++   K G++    +L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA--- 212
            ++M   G   N VTYN L+ GLC  G ++++   +D +    + P+ FTYS L +    
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 213 ----------------------AY----------KERGVHAAMKLLDDIIAKGGKPNLVS 240
                                 AY          K+  V  A ++L+ ++  G  P  V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YN L+ G C+      A   F  + S+   P+ ++YN L+  LC      +A +L+ EM+
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P++ T+N LI +    G+ +    VL +M +   +    S+  ++   C  GK+ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
             V  LD M ++   PN   YN +       G  ++AF +++ + N   S+    Y  ++
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LCR  +  +A +L+Y +   G  PD  +Y+++I   C +G  ++ALE+   M +Y  +
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P +  ++ L+  L  + R      ++Q M+ K   P+ + Y I+V+     +     A +
Sbjct: 434 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 493

Query: 540 LKELQLRQV 548
            KE+  + +
Sbjct: 494 KKEMSEKGI 502



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 210/449 (46%), Gaps = 1/449 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L   F   ++M+  G KP++V    LL  LC+A +M +   +M+ M S  + 
Sbjct: 59  DGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMF 118

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y+ L + L + G     + L  +    G      T + L+ GLC  G + ++ Q 
Sbjct: 119 PDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQV 178

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ L+  GLVP    Y+ L+    + R +  A  + + + ++  +P+ ++YN L+ GLCK
Sbjct: 179 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 238

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
                +A     ++   G +P+V ++N L+ +    G+ E+   +L++M        +++
Sbjct: 239 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 298

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +  ++ +   +GK   A+ +LD+M+     P+A  YN II      G  +     +++M 
Sbjct: 299 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 358

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +     +  TYN L   LC   ++ EA  +I +L N+        Y  +I++ C KG T 
Sbjct: 359 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 418

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A +LL EM KYG  P   TY +L+  L   G + +   ++  M   + +P    +  ++
Sbjct: 419 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 478

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
               +         + + M EKG   ++T
Sbjct: 479 DAYVRCENDSKVASLKKEMSEKGIAFDDT 507



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 188/438 (42%), Gaps = 77/438 (17%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P +  +YN ++ GL   G  + +L+  D ++  G+VPN  TY+ +++   K   + A  +
Sbjct: 13  PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY-------- 276
           L D ++  G KPN+V+YNVLL+GLC+ GR +E      ++ S    P+  +Y        
Sbjct: 73  LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 277 ---------------------------NILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
                                      +ILL  LC +G+  +A ++L  +      PT V
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD-- 367
            YN LI           A  + ++M     RP   +YN +I  LC   K+++V K  D  
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC---KLEMVTKAEDLV 249

Query: 368 -QMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            +M      P+  T+N L    G  G++++ F ++  +  K   S    +  V+ + C+ 
Sbjct: 250 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 309

Query: 426 GK-----------------------------------TYQAFQLLYEMTKYGFTPDSYTY 450
           GK                                   T QAF L+ +M   G +    TY
Sbjct: 310 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTY 369

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + L++GLC    I+EA E+   +     +PDV ++N ++   C    TD +LE+ Q M +
Sbjct: 370 NLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNK 429

Query: 511 KGQMPNETTYTILVEGIA 528
            G  P   TY  LV  +A
Sbjct: 430 YGIRPTLRTYHTLVSALA 447



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 165/355 (46%), Gaps = 2/355 (0%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+AF+Y+ ++   ++      A+K+ D+++  G  PN ++YN ++ G  K G  E   R 
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G +PN+V+YN+LL  LC  GR +E   L+ EM      P   TY+IL   L  
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G++   L +  E +K      A + + ++  LC +GKV    + L+ + H    P    
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN L    C V  ++ AF I + + ++        Y  +I  LC+     +A  L+ EM 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           K G  P   T+++LI      G +E+   +   M++   K DV +F +++   CK+ +  
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            ++ +   MI K   PN   Y  +++      + E  A +L E      VS S V
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTE-QAFLLVEKMKNSGVSASIV 367



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 3/245 (1%)

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
           G   P   +YN++I  L   GK   ALKV DEMV     P+  +YN +I      G ++ 
Sbjct: 10  GAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEA 69

Query: 362 VVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVI 419
             +  DQM H   KPN  TYN  L+ LC  G++ E   ++  + +  +  P  F Y  + 
Sbjct: 70  GFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMAS-HSMFPDGFTYSILF 128

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             L R G++     L  E  K G    +YT S L+ GLC +G + +A ++  ++      
Sbjct: 129 DGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 188

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P    +N L+ G C+ R    +  +F+ M  +   P+  TY  L+ G+   + +  + ++
Sbjct: 189 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 248

Query: 540 LKELQ 544
           + E++
Sbjct: 249 VMEME 253


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 220/463 (47%), Gaps = 17/463 (3%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+  F  ++ MV  G  P V     +L  LCK  ++K A K+ + M+   ++P+  +Y  
Sbjct: 173 LDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNT 232

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++  CK G +  A+   E+M++     N VTYNSL+ GLC  G ++ + + L  +   G
Sbjct: 233 LIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSG 292

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL--VSYNVLLTGLCKEGRTEE 256
            +P  F  SF+ +      G        DD +  G +  +   +Y +LL GLC+ GR E+
Sbjct: 293 FLPGGF-LSFVFDDHSNGAG--------DDGLFDGKEIRIDERTYCILLNGLCRVGRIEK 343

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      L   G  P+ +SYNIL+ + C EG  ++A     +M+     P  +T+N +I 
Sbjct: 344 AEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVIS 403

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G+ DHA   +  MV+    P+  +YN +I     +G      + LD+M     KP
Sbjct: 404 KFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKP 463

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  +Y  L   LC   K+ +A  ++  +  +  S   E Y  +I + C   K   AF+  
Sbjct: 464 NVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFF 523

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM + G      TY++LI GL   G +++A ++F+ M      PDV  +N+L+ G  KS
Sbjct: 524 DEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKS 583

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILV-----EGIAHQDEL 533
             T   LE++  M   G  P   T+  L+     EG+   D++
Sbjct: 584 VNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKM 626



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 224/492 (45%), Gaps = 33/492 (6%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKM-KKAIKVMEMMVSSGIIPDASSYTYLV 140
           AF  L  + +   KP    + NLL+ LC  +KM  +A  +   M   G +P   S   L+
Sbjct: 73  AFSSLSELHAHVSKP--FFSDNLLW-LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLL 129

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             L    +    + +   + D G   + V Y   V+   ML +L++  + +  +++ G+ 
Sbjct: 130 RTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMG 189

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ F Y+ +L    K R +  A KL D++I +   PN V+YN L+ G CK G  EEA+ F
Sbjct: 190 PSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGF 249

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP----TIV------- 309
              +  +  E N+V+YN LL  LC  GR ++A E+L EM+G    P    + V       
Sbjct: 250 KERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNG 309

Query: 310 -----------------TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
                            TY IL+  L   G+ + A +VL ++V+    PS  SYN ++  
Sbjct: 310 AGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNA 369

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
            C EG V   +   +QM  R  +PN  T+N  ++  C  G+V  A   ++ +  K  S  
Sbjct: 370 YCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPT 429

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
            E Y  +I    +KG   + F+ L EM K G  P+  +Y SLI  LC +  + +A  +  
Sbjct: 430 VETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLA 489

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M      P+ + +N L+   C   +   +   F  MI+ G      TY  L+ G+    
Sbjct: 490 DMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNG 549

Query: 532 ELELSAEVLKEL 543
            ++ + ++  ++
Sbjct: 550 RVKKAEDLFLQM 561



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 208/442 (47%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LL  LC+  +++KA +V+  +V +G+ P   SY  LVN  C++G+V  A+   E+ME+ G
Sbjct: 331 LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N +T+N+++   C  G ++ +  ++ R+++KG+ P   TY+ L+    ++       
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCF 450

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           + LD++   G KPN++SY  L+  LCK+ +  +A     D+  +G  PN   YN+L+ + 
Sbjct: 451 EFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEAS 510

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C   + ++A     EM       T+VTYN LI  L  +G+   A  +  +M      P  
Sbjct: 511 CSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDV 570

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
            +YN +I+           ++  D+M     KP  GT++ L   C    V     + Q +
Sbjct: 571 ITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEM 630

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                   Q  Y  +I S    G   +A  L  +M   G   D  TY+SLI     +  +
Sbjct: 631 LQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRV 690

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            E   +   M+     P VD +N L+ GLC  +  + +   ++ M+E+G + N +    L
Sbjct: 691 SEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQL 750

Query: 524 VEGIAHQDELELSAEVLKELQL 545
           + G+  +  L  +  V  EL +
Sbjct: 751 ISGLREEGMLREAQIVSSELSI 772



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 212/473 (44%), Gaps = 36/473 (7%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP--------------- 131
           ERM  +  + ++V   +LL  LC + ++  A +V+  M  SG +P               
Sbjct: 251 ERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGA 310

Query: 132 -------------DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
                        D  +Y  L+N LC+ G +  A +++ K+ + G   + ++YN LV   
Sbjct: 311 GDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAY 370

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C  G++ +++   +++ ++GL PN  T++ ++    +   V  A   +  ++ KG  P +
Sbjct: 371 CQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTV 430

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            +YN L+ G  ++G       F  ++   G +PNV+SY  L+  LC + +  +A  +LA+
Sbjct: 431 ETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLAD 490

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M G   SP    YN+LI +     K   A +  DEM++     +  +YN +I  L   G+
Sbjct: 491 MIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGR 550

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
           V        QM  + C P+  TYN    G A      K  E +  ++ LG K    P   
Sbjct: 551 VKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIK----PTVG 606

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
             + +   CRK       ++  EM +    PD + Y+ +I     +G + +A+ +   M 
Sbjct: 607 TFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMV 666

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +     D   +N+L+L   + RR      +   M  KG +P   TY IL++G+
Sbjct: 667 DQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGL 719



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 174/386 (45%), Gaps = 2/386 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A L  E+M  +G +P+ +    ++   C+  ++  A   +  MV  G+ P   +Y  L+N
Sbjct: 379 AILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLIN 438

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
              +KG+     + +++M+  G   N ++Y SL+  LC    L  +   L  +I +G+ P
Sbjct: 439 GYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSP 498

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           NA  Y+ L+EA+     +  A +  D++I  G    LV+YN L+ GL + GR ++A   F
Sbjct: 499 NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLF 558

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  KG  P+V++YN L+         ++  EL  +M      PT+ T++ LI +    
Sbjct: 559 LQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKE 618

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G      K+  EM++    P    YN +I     +G V   +    QM  +    ++ TY
Sbjct: 619 GVVTMD-KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTY 677

Query: 382 NGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N L +      +V E   ++  +  K      + Y  +I  LC       A+    EM +
Sbjct: 678 NSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVE 737

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEA 466
            G   +      LI GL  EG++ EA
Sbjct: 738 RGLLLNVSMCYQLISGLREEGMLREA 763



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 1/244 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D KL DA + L  M+ +G  P+      L+   C  +K+K A +  + M+ SGI     
Sbjct: 477 KDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLV 536

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N L + G V  A  L  +M   G   + +TYNSL+ G     N  + L+  D++
Sbjct: 537 TYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKM 596

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ P   T+  L+ A  KE GV    K+  +++     P+   YN ++    ++G  
Sbjct: 597 KILGIKPTVGTFHPLIYACRKE-GVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNV 655

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+   + +  +G + + V+YN L+ +   + R  E   L+ +M      P + TYNIL
Sbjct: 656 MKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNIL 715

Query: 315 IGSL 318
           I  L
Sbjct: 716 IKGL 719



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 4/228 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K  D FLQ   M  KG  PDV+   +L+    K+   +K +++ + M   GI P   
Sbjct: 550 RVKKAEDLFLQ---MAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVG 606

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+   C+K  V    ++ ++M       +   YN ++      GN+ +++    ++
Sbjct: 607 TFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQM 665

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G+  +  TY+ L+ A  ++R V     L+DD+ AKG  P + +YN+L+ GLC     
Sbjct: 666 VDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDF 725

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
             A  ++R++  +G   NV     L+  L  EG   EA  + +E+  G
Sbjct: 726 NGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIG 773



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 54/235 (22%)

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAF 397
           R RP++  +N  I+  CS+    L +   D  + +R +        L  L   G+   A 
Sbjct: 10  RLRPNS-HFNNSISFFCSQS---LTLCESDPQYQKRLQK----VQKLETLISRGRTITAR 61

Query: 398 AIIQSL--GNKQNSSPQEFYKYV--------ITSLCRKGKTY-QAFQLLYEMTKYGFTPD 446
             ++SL       SS  E + +V        +  LC   K   +A  L   M K GF P 
Sbjct: 62  RFLRSLLLTKTAFSSLSELHAHVSKPFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPS 121

Query: 447 SYTYSSLIRGLCMEGLIEEALEIF----------------------VVMEEYD------- 477
           + + + L+R L      E+ L +F                      V++++ D       
Sbjct: 122 TRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMK 181

Query: 478 ------YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
                   P V  +N +L GLCK RR   + ++F  MI++  +PN  TY  L++G
Sbjct: 182 SMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDG 236


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 223/489 (45%), Gaps = 36/489 (7%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD      ++  L ++ K   A+KV + MV  G++P+  +Y  +++   K G++    +L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA--- 212
            ++M   G   N VTYN L+ GLC  G ++++   +D +    + P+ FTYS L +    
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311

Query: 213 ----------------------AY----------KERGVHAAMKLLDDIIAKGGKPNLVS 240
                                 AY          K+  V  A ++L+ ++  G  P  V 
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YN L+ G C+      A   F  + S+   P+ ++YN L+  LC      +A +L+ EM+
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P++ T+N LI +    G+ +    VL +M +   +    S+  ++   C  GK+ 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
             V  LD M ++   PN   YN +       G  ++AF +++ + N   S+    Y  ++
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LCR  +  +A +L+Y +   G  PD  +Y+++I   C +G  ++ALE+   M +Y  +
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P +  ++ L+  L  + R      ++Q M+ K   P+ + Y I+V+     +     A +
Sbjct: 612 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 671

Query: 540 LKELQLRQV 548
            KE+  + +
Sbjct: 672 KKEMSEKGI 680



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 210/482 (43%), Gaps = 79/482 (16%)

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCM 180
           ++V++G  PD  ++  +V      G++  A+ +V +M   +   P +  +YN ++ GL  
Sbjct: 147 LLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWR 206

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            G  + +L+  D ++  G+VPN  TY+ +++   K   + A  +L D ++  G KPN+V+
Sbjct: 207 SGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVT 266

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY------------------------ 276
           YNVLL+GLC+ GR +E      ++ S    P+  +Y                        
Sbjct: 267 YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESL 326

Query: 277 -----------NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
                      +ILL  LC +G+  +A ++L  +      PT V YN LI          
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD---QMFHRRCKPNEGTYN 382
            A  + ++M     RP   +YN +I  LC   K+++V K  D   +M      P+  T+N
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLC---KLEMVTKAEDLVMEMEKSGVDPSVETFN 443

Query: 383 GLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK-------------- 427
            L    G  G++++ F ++  +  K   S    +  V+ + C+ GK              
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 503

Query: 428 ---------------------TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                                T QAF L+ +M   G +    TY+ L++GLC    I+EA
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 563

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            E+   +     +PDV ++N ++   C    TD +LE+ Q M + G  P   TY  LV  
Sbjct: 564 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSA 623

Query: 527 IA 528
           +A
Sbjct: 624 LA 625



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 208/441 (47%), Gaps = 1/441 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L   F   ++M+  G KP++V    LL  LC+A +M +   +M+ M S  + PD  +Y+ 
Sbjct: 245 LEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSI 304

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L + L + G     + L  +    G      T + L+ GLC  G + ++ Q L+ L+  G
Sbjct: 305 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 364

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           LVP    Y+ L+    + R +  A  + + + ++  +P+ ++YN L+ GLCK     +A 
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 424

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
               ++   G +P+V ++N L+ +    G+ E+   +L++M        ++++  ++ + 
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +GK   A+ +LD+M+     P+A  YN II      G  +     +++M +     + 
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 544

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L   LC   ++ EA  +I +L N+        Y  +I++ C KG T +A +LL E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M KYG  P   TY +L+  L   G + +   ++  M   + +P    +  ++    +   
Sbjct: 605 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664

Query: 498 TDLSLEVFQMMIEKGQMPNET 518
                 + + M EKG   ++T
Sbjct: 665 DSKVASLKKEMSEKGIAFDDT 685



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 154/307 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+  A   LE +V  G  P  V    L+   C+   ++ A  + E M S  I PD  
Sbjct: 346 KDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHI 405

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK   V  A  LV +ME  G   +  T+N+L+      G L +    L  +
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            QKG+  +  ++  +++A  K   +  A+ +LDD+I K   PN   YN ++    + G T
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A      + + G   ++V+YN+LL+ LC   + +EA EL+  +      P +V+YN +
Sbjct: 526 EQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 585

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G TD AL++L EM K   RP+  +Y+ +++ L S G+V  +     QM H+  
Sbjct: 586 ISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNV 645

Query: 375 KPNEGTY 381
           +P+   Y
Sbjct: 646 EPSSSIY 652



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 175/375 (46%), Gaps = 3/375 (0%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL--IQKGLVPNAFTYSFLLEAAYKERGVH 220
           G   +T  +N +V+     G+L+ +L  + R+   +    P+AF+Y+ ++   ++     
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 211

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A+K+ D+++  G  PN ++YN ++ G  K G  E   R    +   G +PN+V+YN+LL
Sbjct: 212 DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLL 271

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC  GR +E   L+ EM      P   TY+IL   L   G++   L +  E +K    
Sbjct: 272 SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
             A + + ++  LC +GKV    + L+ + H    P    YN L    C V  ++ AF I
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            + + ++        Y  +I  LC+     +A  L+ EM K G  P   T+++LI     
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G +E+   +   M++   K DV +F +++   CK+ +   ++ +   MI K   PN   
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511

Query: 520 YTILVEGIAHQDELE 534
           Y  +++      + E
Sbjct: 512 YNSIIDAYIESGDTE 526



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 93/227 (40%), Gaps = 35/227 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L   F  L  M  KG K DV+   +++   CK  K+ +A+ +++ M+   + P+A  Y 
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN------------------------- 172
            +++   + G+   A  LVEKM++ G   + VTYN                         
Sbjct: 514 SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573

Query: 173 ----------SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                     +++   C  G+ +++L+ L  + + G+ P   TY  L+ A      VH  
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDM 633

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
             L   ++ K  +P+   Y +++    +     +     +++  KG 
Sbjct: 634 ECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 232/485 (47%), Gaps = 14/485 (2%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF       SKG  P +     L+  L K+N++ K+ +V + M   G++ D  +Y   +N
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK G +  A+ L  KM + G   N VTYN+L+ GLC  G L ++L F  R+++  + P
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY  L+    K      A  +L ++ +KG  PN   +N L+ G  ++G  ++A+R  
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            D+  KG +PN V++N LL+  C   + E+A ++L  +     S      + ++  L   
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK----VDLVVKCLDQMFHRRCKPN 377
            K D ALK++  ++    + + +    ++  LC  GK    +DL  +  D+   +    N
Sbjct: 430 SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADK---KGLAAN 486

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T N L   LC  G ++E F + + +  +        Y  +I   C+ GK  +AF+L  
Sbjct: 487 TTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKE 546

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M K GF PD+YTY+ L++GL  +G +++   +    +++   P++  +  +L G C + 
Sbjct: 547 KMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNAD 606

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           R D ++ +F  ++      +   Y IL+   AH      +    +  +LR  +  S +  
Sbjct: 607 RIDNAVSLFNKLVYNKVELSYVVYNILIA--AHSK----AGNFTEAFKLRDAMRSSNIHP 660

Query: 557 LVMQY 561
            +  Y
Sbjct: 661 TIFTY 665



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 233/502 (46%), Gaps = 4/502 (0%)

Query: 62  PNRKPGNN-NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PN    NN  D   +  +L +A +   RMV     P +V    L+  L K  K  +A  V
Sbjct: 274 PNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSV 333

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           +  M S G  P+   +  L++   +KGN+  A+++ + M   G   N VT+N+L++G C 
Sbjct: 334 LVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCR 393

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
              + Q+ Q L+ L+   L  N    S++L    K     +A+K++  ++ +  K N   
Sbjct: 394 TNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSL 453

Query: 241 YNVLLTGLCKEGRTEEAIR-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
             +L+ GLCK G+  EAI  +FR    KG   N  + N LL  LC  G  EE   +  EM
Sbjct: 454 LTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEM 513

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                    ++YN LI      GK + A K+ ++M+K  F+P   +YN ++  L  +GK+
Sbjct: 514 VERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKM 573

Query: 360 DLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D V + L +       PN  TY   L   C   ++  A ++   L   +       Y  +
Sbjct: 574 DDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNIL 633

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I +  + G   +AF+L   M      P  +TYSS+I G+C   L+EEA  IF  M     
Sbjct: 634 IAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGL 693

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P+V  + AL+ G CK  + D    + Q M      PN+ TYTI+++G       + + +
Sbjct: 694 MPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATK 753

Query: 539 VLKELQLRQVVSESAVERLVMQ 560
           +L E+ +   +S   V   V+Q
Sbjct: 754 LLNEM-IANGISPDTVTYTVLQ 774



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 209/455 (45%), Gaps = 39/455 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R   ++DA    + M  KG KP+ V    LL   C+ N+M++A +V+E ++S+ + 
Sbjct: 354 DGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLS 413

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKM------------------------------- 159
            +  + +Y+++ LCK      A+++V+ +                               
Sbjct: 414 VNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDL 473

Query: 160 -----EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
                +  G   NT T N+L+ GLC  GN+ +       ++++GLV +  +Y+ L+    
Sbjct: 474 WFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCC 533

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K   +  A KL + ++ +G KP+  +YN L+ GL  +G+ ++  R   +    G  PN+ 
Sbjct: 534 KSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIY 593

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y ++L   C   R + A  L  ++       + V YNILI + +  G    A K+ D M
Sbjct: 594 TYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM 653

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKV 393
                 P+  +Y+ II  +C    V+      ++M +    PN   Y  L    C +G++
Sbjct: 654 RSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQM 713

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            +  +I+Q + +      +  Y  +I   C+ G T +A +LL EM   G +PD+ TY+ L
Sbjct: 714 DQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVL 773

Query: 454 IRGLCMEGLIEEALE--IFVVMEEYDYKPDVDNFN 486
            +G C E  +EE L+    V +EE  Y   VD  +
Sbjct: 774 QKGYCKENELEETLQGDTAVPLEEITYTTLVDKLH 808



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 172/414 (41%), Gaps = 72/414 (17%)

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           ++L + ++  G H A        +KG  P+L S N L++ L K     ++ R F  +   
Sbjct: 176 YILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRG 235

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G   +V +Y   + + C  G+ +EA  L  +M  G   P +VTYN LI  L   G+ + A
Sbjct: 236 GVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEA 295

Query: 328 LKVLDEMVKGRFRPSAASY-----------------------------------NPIIAR 352
           L     MV+ +  PS  +Y                                   N +I  
Sbjct: 296 LMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDG 355

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
              +G +D  ++  D M  +  KPN  T+N L    C   ++++A  +++ L +   S  
Sbjct: 356 YSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVN 415

Query: 412 QEFYKYVITSLCRK-----------------------------------GKTYQAFQLLY 436
           ++   YV+  LC+                                    GK  +A  L +
Sbjct: 416 EDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWF 475

Query: 437 EMT-KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +  K G   ++ T ++L+ GLC  G +EE   +   M E     D  ++N L+ G CKS
Sbjct: 476 RLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKS 535

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            + + + ++ + M+++G  P+  TY  L++G+A + +++    VL E +   VV
Sbjct: 536 GKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVV 589



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 46/288 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +AF   E+M+ +G KPD      L+  L    KM    +V+      G++P+  +Y 
Sbjct: 537 KIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYA 596

Query: 138 YLVNCLC-----------------------------------KKGNVGYAMQLVEKMEDY 162
            ++   C                                   K GN   A +L + M   
Sbjct: 597 LMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSS 656

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
                  TY+S++ G+C    + ++    + +  +GL+PN F Y+ L+    K   +   
Sbjct: 657 NIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQI 716

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             +L ++ +   +PN ++Y +++ G CK G T+EA +   ++ + G  P+ V+Y +L + 
Sbjct: 717 ESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKG 776

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTI--VTYNILIGSLAYHGKTDHAL 328
            C E   EE  +       GD +  +  +TY  L+  L  H  +D AL
Sbjct: 777 YCKENELEETLQ-------GDTAVPLEEITYTTLVDKL--HPHSDAAL 815


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 226/468 (48%), Gaps = 13/468 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M + G+   VV  T L+  LCK+  +  A  +++ M  +G  P+  +YT L++ LCK   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+Q V++M   G   + VTYNSL+ GLCM   ++ +   L  L++ G  PN  TYS 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD---LP 265
           L+    + R +  A  L+ ++I +G   NLV Y   + G C E R + +    RD   + 
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFC-EARCQSSRYECRDGDEMI 179

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  P+VV+YN  +  LC  G+ ++  E+L EMD G   P +VT+  +I  L    + D
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR--CKPNEGTYNG 383
            A +V   M++    P + +Y+ ++  L    ++D V + L+ M   +  C     T+N 
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 384 -LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF--YKYVITSLCRKGKTYQAFQLLYEMTK 440
            +  LC  GK   A  I+  LG  ++ S      Y +VI  LC+ G    A++L  +M  
Sbjct: 300 FIGALCRSGKFPLAKNIL--LGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 357

Query: 441 YGFT-PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY-KPDVDNFNALLLGLCKSRRT 498
            G   PD   +++LI G C  G + +A ++ + M+  +   PDV  +N L+ G  K    
Sbjct: 358 SGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSL 417

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             +  + Q M   G  PN  TY  L+ G A     E +  +  E+  +
Sbjct: 418 KQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAK 465



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 232/494 (46%), Gaps = 45/494 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA--NKMKKAIKVMEMMVSSGIIPD 132
           R  +L+ A   +  M+ +G   ++V   + ++  C+A     +   +  + M+ SG IPD
Sbjct: 127 RRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPD 186

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +Y   ++ LCK G +   ++++E+M+  G P + VT+ S++ GLC    ++ + Q   
Sbjct: 187 VVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFK 246

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHA---------AMK------------------- 224
            ++++G VP++ TYS +L+   +   +           AMK                   
Sbjct: 247 GMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCR 306

Query: 225 ---------LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF-EPNVV 274
                    +L  +I  G  PNL+SYN ++ GLCK G  ++A +  R +   G  +P+V+
Sbjct: 307 SGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVI 366

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRS-PTIVTYNILIGSLAYHGKTDHALKVLDE 333
            +N L+   C  GR  +A++LL EM   +   P +VTYN LI   +  G    A  +L E
Sbjct: 367 FFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQE 426

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGK 392
           M     +P+  +Y  +I      G  +      D+M  + C P+  TYN  L+     G 
Sbjct: 427 MQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGM 486

Query: 393 VQEAFAIIQSLGNKQN-SSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           + +A  + Q L NK +  SP    Y+ +I   CR   T Q   LL EMT  G++ DSYTY
Sbjct: 487 MSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTY 546

Query: 451 SSLIRGLC-MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           + LI  L   E +  +AL ++  M + D  P    FN+L+    ++   + +  + Q M 
Sbjct: 547 NVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMN 606

Query: 510 EKGQMPNETTYTIL 523
           EKG + + +    L
Sbjct: 607 EKGHLVDASNLEAL 620



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 234/482 (48%), Gaps = 9/482 (1%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA   ++RM+  G +PD+V   +L++ LC AN+M  A  V++ +V +G  P+  +Y+ L
Sbjct: 62  HDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTL 121

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD--RLIQK 197
           V   C++  +  A  L+ +M   G   N V Y   + G C     +   +  D   +I+ 
Sbjct: 122 VIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIES 181

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+  TY+  +    K   +   +++L+++   G  P++V++  +++GLCK  R ++A
Sbjct: 182 GRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDA 241

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT--IVTYNILI 315
            + F+ +  +G  P+ ++Y+I+L +L    R +  +E+L  M          + T+N  I
Sbjct: 242 FQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFI 301

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC- 374
           G+L   GK   A  +L  M++    P+  SYN +I  LC  G VD   K   +M    C 
Sbjct: 302 GALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCC 361

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
           KP+   +N L +  C  G++ +A  ++  +  K    P    Y  +I    + G   QA 
Sbjct: 362 KPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAK 421

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            LL EM   G  P+  TY++LI G    G+ EEA  +F  M      PD+  +N +L   
Sbjct: 422 LLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAF 481

Query: 493 CKSRRTDLSLEVFQMMIEKGQM--PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
            K+     +  V+Q +  K     P+  TY IL++G    ++ E    +L+E+  R    
Sbjct: 482 SKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSC 541

Query: 551 ES 552
           +S
Sbjct: 542 DS 543



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 3/249 (1%)

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           ++VTY  LI  L   G  D A  +L +M      P+  +Y  +I  LC   +    ++ +
Sbjct: 9   SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTV 68

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            +M    C+P+  TYN L   LC   ++ +A  ++Q L     +     Y  ++   CR+
Sbjct: 69  KRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRR 128

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV--VMEEYDYKPDVD 483
            +  QA  L+ EM   G   +   Y   I G C         E      M E    PDV 
Sbjct: 129 RRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVV 188

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +N  + GLCK+ + D  LE+ + M   G  P+  T+  ++ G+   + ++ + +V K +
Sbjct: 189 TYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGM 248

Query: 544 QLRQVVSES 552
             R  V +S
Sbjct: 249 LERGCVPDS 257



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I  LC+ G    A  LL +M   G  P+  TY++LI GLC      +A++    M 
Sbjct: 13  YTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRML 72

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
               +PD+  +N+L+ GLC + R D +  V Q ++  G  PN  TY+ LV     +  L+
Sbjct: 73  RSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLD 132

Query: 535 LSAEVLKELQLRQVVSESAV 554
            +  +++E+ LR  V    V
Sbjct: 133 QARGLIREMILRGSVCNLVV 152



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 5/202 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D + +   L  A L L+ M + G KP+VV    L+    K    ++A  + + M + G  
Sbjct: 409 DGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCF 468

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMED---YGYPTNTVTYNSLVRGLCMLGNLNQS 187
           PD  +Y  +++   K G +  A  + +++++   Y  P + +TY  L+ G C   +  Q 
Sbjct: 469 PDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSP-DAITYRILIDGYCRAEDTEQG 527

Query: 188 LQFLDRLIQKGLVPNAFTYSFLL-EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           L  L  +  +G   +++TY+ L+ + A  E     A+ +   ++ +   P+   +N L+ 
Sbjct: 528 LTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVR 587

Query: 247 GLCKEGRTEEAIRFFRDLPSKG 268
              + G    A    +++  KG
Sbjct: 588 LFLRTGDVNSARSMVQEMNEKG 609


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 209/429 (48%), Gaps = 2/429 (0%)

Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           K+  ++ +   MV    +P  + ++ L++ + K       + L E+M+  G P N  T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            L+   C    L+ +L FL ++I+ G  P+  T+  LL    +   V+ A+ + D ++  
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G KPN+V YN ++ GLCK  + + A+     +   G  P+VV+YN L+  LC  GRW +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             +++ M   +  P + T+N LI +    G+   A +  +EM++    P   +Y+ +I  
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
           LC   ++D   +    M  + C P+  TY+ L    C   KV+    +   +  +     
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I   CR GK   A ++   M   G  P+  TY+ L+ GLC  G IE+AL I  
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M++     D+  +N ++ G+CK+     + +++  +  +G MP+  TYT ++ G+ ++ 
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL-YKK 479

Query: 532 ELELSAEVL 540
            L   A+ L
Sbjct: 480 GLRREADAL 488



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 213/462 (46%), Gaps = 7/462 (1%)

Query: 64  RKPGNNNDTRH------RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA 117
           R   N +D R       R  KL+D+      MV     P +   + LL  + K  K    
Sbjct: 41  RAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVV 100

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
           I + E M   GI  +  +   L+NC C+   +  A+  + KM   G+  + VT+ SL+ G
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
            C    +  +L   D+++  G  PN   Y+ +++   K + V  A+ LL+ +   G  P+
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
           +V+YN L++GLC  GR  +A R    +  +   P+V ++N L+ +   EGR  EA E   
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           EM      P IVTY++LI  L  + + D A ++   MV     P   +Y+ +I   C   
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           KV+  +K   +M  R    N  TY  L    C  GK+  A  I + +           Y 
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            ++  LC  GK  +A  +L +M K G   D  TY+ +IRG+C  G + +A +I+  +   
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
              PD+  +  ++LGL K      +  +F+ M E G +PNE 
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 173/379 (45%), Gaps = 36/379 (9%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           +N   Y  ++R       L+ SL     ++Q   +P+   +S LL A  K +     + L
Sbjct: 44  SNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYL 103

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            + +   G   NL + N+LL   C+  +   A+ F   +   G EP++V++  LL   C 
Sbjct: 104 WEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR 163

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
             R  +A  +  +M G    P +V YN +I  L    + D+AL +L+ M K    P   +
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLG 404
           YN +I+ LCS G+     + +  M  R   P+  T+N L   C   G+V EA        
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA-------- 275

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                  +EFY+                    EM +    PD  TYS LI GLCM   ++
Sbjct: 276 -------EEFYE--------------------EMIRRSLDPDIVTYSLLIYGLCMYSRLD 308

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA E+F  M      PDV  ++ L+ G CKS++ +  +++F  M ++G + N  TYTIL+
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368

Query: 525 EGIAHQDELELSAEVLKEL 543
           +G     +L ++ E+ + +
Sbjct: 369 QGYCRAGKLNVAEEIFRRM 387



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 143/325 (44%), Gaps = 34/325 (10%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P++  ++ LL+ + K  + +  I  +  +   G   N+ + NILL   C   +   A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L +M      P+IVT+  L+       +   AL + D+MV   ++P+   YN II  LC 
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
             +VD  +  L++M      P+  TYN L                               
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSL------------------------------- 227

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
              I+ LC  G+   A +++  MTK    PD +T+++LI     EG + EA E +  M  
Sbjct: 228 ---ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               PD+  ++ L+ GLC   R D + E+F  M+ KG  P+  TY+IL+ G     ++E 
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344

Query: 536 SAEVLKELQLRQVVSESAVERLVMQ 560
             ++  E+  R VV  +    +++Q
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQ 369


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 230/509 (45%), Gaps = 56/509 (11%)

Query: 73  RHRDHKL-----------NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM 121
           + RDH L           + A    E M + G +P+V   TNL++    A  ++ AI  +
Sbjct: 191 KQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACV 250

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
           E M + G+ P+A++Y+ +++   + G+V  A +  ++     +  N V YN+++   C  
Sbjct: 251 EEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKA 310

Query: 182 GNLNQS-----------------------------------LQFLDRL---IQKGLVPNA 203
           GN+ ++                                   L    RL    + GL P  
Sbjct: 311 GNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTV 370

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            +Y  L+    K   +  A+++ +++  +G K N  +Y++++ G  + G T  A   F D
Sbjct: 371 VSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFED 430

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           + + G +P+ ++YNIL+ + C  G+   A ELLA M+ GD  PT+ TY I+I      G 
Sbjct: 431 MSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGD 490

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN- 382
              A + + +M    FRPSAA+YN I+  L   G++D     +D+M      PNE +Y  
Sbjct: 491 LRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTT 550

Query: 383 ---GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
              G A +  +G   + F  I+ +G K +      Y  ++ + C+ G+      +  EM 
Sbjct: 551 LIEGYACIGDMGLAFKYFNRIKEVGLKPDVIA---YASLLKACCKAGRMQSTLAITAEMA 607

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G   ++Y Y+ L+ G    G + EA +I   M      PD+ ++ + +   CK+    
Sbjct: 608 AAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDML 667

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIA 528
            + E  + M ++G  PN   YT L+ G A
Sbjct: 668 KATETIEQMKQQGVQPNLQAYTTLIHGWA 696



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 183/427 (42%), Gaps = 40/427 (9%)

Query: 103 NLLYD---LCKA-NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           N+L D    C+A +K     + ++    +G+ P   SY  L+N   K G +  A+Q+  +
Sbjct: 336 NMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNE 395

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           MED G   N  TY+ ++ G   LG+   +    + +   G+ P+  TY+ L+ A  K   
Sbjct: 396 MEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQ 455

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           ++ A++LL  + +    P L +Y +++ G  K G    A    RD+   GF P+  +YN+
Sbjct: 456 MNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNV 515

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++  L   G+              DR+ +I+                      DEMV   
Sbjct: 516 IMHGLAQAGQM-------------DRAASII----------------------DEMVVAG 540

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAF 397
             P+  SY  +I      G + L  K  +++     KP+   Y   L   C  G++Q   
Sbjct: 541 VHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTL 600

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           AI   +           Y  ++    ++G  ++A  ++ +M   G TPD ++Y+S I   
Sbjct: 601 AITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINAC 660

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  G + +A E    M++   +P++  +  L+ G   +   + +L  +  M   G +P++
Sbjct: 661 CKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDK 720

Query: 518 TTYTILV 524
             Y  ++
Sbjct: 721 PLYHCIM 727



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 195/453 (43%), Gaps = 39/453 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +T LVN   K+G+   A    E M   G   N  +Y +L+    +  +L  ++  
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++ +  +G+ PNA TYS ++    +   V AA +     +++    N V YN ++   CK
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309

Query: 251 EGRTEEA-----------------------------------IRFFRDLPSK---GFEPN 272
            G  E A                                   +  FR L ++   G  P 
Sbjct: 310 AGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPT 369

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VVSY  L+      G+ ++A ++  EM+         TY+++I      G T +A  V +
Sbjct: 370 VVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFE 429

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
           +M     +P   +YN ++   C  G+++  ++ L +M    C P   TY  +      +G
Sbjct: 430 DMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIG 489

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            ++ AF  ++ +           Y  ++  L + G+  +A  ++ EM   G  P+  +Y+
Sbjct: 490 DLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYT 549

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LI G    G +  A + F  ++E   KPDV  + +LL   CK+ R   +L +   M   
Sbjct: 550 TLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAA 609

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           G   N   Y IL++G A + ++  +++++++++
Sbjct: 610 GVPMNNYIYNILLDGWAQRGDMWEASDIMQKMR 642



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 144/302 (47%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AF   E M + G KPD +    L+   CK  +M +A++++  M S    P   +YT ++
Sbjct: 423 NAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIII 482

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +   K G++  A + V  M+  G+  +  TYN ++ GL   G ++++   +D ++  G+ 
Sbjct: 483 DGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVH 542

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN  +Y+ L+E       +  A K  + I   G KP++++Y  LL   CK GR +  +  
Sbjct: 543 PNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAI 602

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++ + G   N   YNILL      G   EA++++ +M     +P I +Y   I +   
Sbjct: 603 TAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCK 662

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G    A + +++M +   +P+  +Y  +I    S    +  + C D+M      P++  
Sbjct: 663 AGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPL 722

Query: 381 YN 382
           Y+
Sbjct: 723 YH 724



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 130/285 (45%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++N A   L RM S    P +   T ++    K   ++ A + +  M  +G  P A+
Sbjct: 452 KNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAA 511

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++ L + G +  A  ++++M   G   N  +Y +L+ G   +G++  + ++ +R+
Sbjct: 512 TYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRI 571

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL P+   Y+ LL+A  K   + + + +  ++ A G   N   YN+LL G  + G  
Sbjct: 572 KEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDM 631

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA    + +  +G  P++ SY   + + C  G   +A E + +M      P +  Y  L
Sbjct: 632 WEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTL 691

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           I   A     + AL   DEM      P    Y+ I+  L S   V
Sbjct: 692 IHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAV 736


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 234/472 (49%), Gaps = 18/472 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV---MEMMVSSGI-I 130
           R+   N+A   +ERM   G  PDVV   + +  LC+A K+ +A ++   M+M    G+  
Sbjct: 231 REEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPR 290

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  ++   CK G +G A  LVE M+  G   +   YN  + GL   G L ++   
Sbjct: 291 PNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLV 350

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           LD ++ KG+ PNA+TY+ +++   +   +  A  L+D ++  G  P+ V+Y+ LL G C 
Sbjct: 351 LDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCS 410

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA     ++   G +PN  + N LL SL  EGR  EA E+L +M+     P  VT
Sbjct: 411 RGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVT 470

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
            NI++  L  +G+ D A +++ EM      P++       A L +   +  V  CL    
Sbjct: 471 CNIVVNGLCRNGELDKASEIVSEMWTN--GPTSLDKGNSFASLINS--IHNVSNCL---- 522

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                P+  TY  L   LC VG+++EA      +  K        Y   I S C++GK  
Sbjct: 523 -----PDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKIS 577

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF++L +M + G +    TY++LI GL     I E   +   M+E    PD+  +N ++
Sbjct: 578 SAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNII 637

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
             LC+  +   ++ +   M++KG  PN +++ IL++  +   + +++ E+ +
Sbjct: 638 TCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE 689



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 205/472 (43%), Gaps = 63/472 (13%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M+++ + P   ++  L++ LC+     +A+QL EKM   G   N  T   LVRGLC  G 
Sbjct: 141 MLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGL 200

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           + Q+L+ ++       + N   Y+ L+    +E   + A +L++ +   G  P++V++N 
Sbjct: 201 VKQALELVNN-NNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNS 259

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGF----EPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            ++ LC+ G+  EA R FRD+          PNVV++N++L+  C  G   +A  L+  M
Sbjct: 260 RISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETM 319

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL------ 353
                  ++  YNI +  L  +G+   A  VLDEMV     P+A +YN ++  L      
Sbjct: 320 KKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHML 379

Query: 354 -----------------------------CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
                                        CS GKV      L +M    C+PN  T N L
Sbjct: 380 SDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTL 439

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              L   G+  EA  ++Q +  K           V+  LCR G+  +A +++ EM   G 
Sbjct: 440 LHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGP 499

Query: 444 T----------------------PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           T                      PD  TY++LI GLC  G +EEA + F+ M   + +PD
Sbjct: 500 TSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPD 559

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
              ++  +   CK  +   +  V + M   G      TY  L+ G+   +++
Sbjct: 560 SVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQI 611



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 192/438 (43%), Gaps = 48/438 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+H L+DA   ++ M+  G  PD V  + LL+  C   K+ +A  V+  M+ +G  P+  
Sbjct: 375 RNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTY 434

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L++ L K+G    A ++++KM +  Y  +TVT N +V GLC  G L+++ + +  +
Sbjct: 435 TCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEM 494

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G        SF    A     +H     L         P+ ++Y  L+ GLCK GR 
Sbjct: 495 WTNGPTSLDKGNSF----ASLINSIHNVSNCL---------PDGITYTTLINGLCKVGRL 541

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA + F ++ +K   P+ V+Y+  + S C +G+   A  +L +M+    S T+ TYN L
Sbjct: 542 EEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNAL 601

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L  + +      + DEM +    P   +YN II  LC  GK    +  L +M  +  
Sbjct: 602 ILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGI 661

Query: 375 KPNEGTYNGLAM--------------------LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            PN  ++  L                      +CG  +   +    + L   Q S  +E 
Sbjct: 662 SPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKEL 721

Query: 415 ---------------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
                          YK +I  LC+  +   A  LLY++   G+  D  ++  +I GL  
Sbjct: 722 FEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSK 781

Query: 460 EGLIEEALEIFVVMEEYD 477
            G   +A E+   M E +
Sbjct: 782 RGNKRQADELAKRMMELE 799



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 203/456 (44%), Gaps = 38/456 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    Y  L+    +    G+   L   M        T T+N L+  LC     + +LQ 
Sbjct: 113 PSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQL 172

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD----IIAKGGKPNLVSYNVLLT 246
            +++ QKG  PN FT   L+    +   V  A++L+++     IA     N V YN L++
Sbjct: 173 FEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIA-----NRVVYNTLVS 227

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----DGG 302
             C+E    EA R    +   G  P+VV++N  + +LC  G+  EA+ +  +M    + G
Sbjct: 228 RFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELG 287

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDL 361
              P +VT+N+++     HG    A  +++ M K G F  S   YN  +  L   G++  
Sbjct: 288 LPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNF-DSLECYNIWLMGLLRNGELLE 346

Query: 362 VVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
               LD+M  +  +PN  TYN  +  LC    + +A  ++  +           Y  ++ 
Sbjct: 347 ARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLH 406

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
             C +GK ++A  +L+EM + G  P++YT ++L+  L  EG   EA E+   M E  Y+P
Sbjct: 407 GYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQP 466

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMM-------IEKGQ---------------MPNET 518
           D    N ++ GLC++   D + E+   M       ++KG                +P+  
Sbjct: 467 DTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGI 526

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           TYT L+ G+     LE + +   E+  + +  +S  
Sbjct: 527 TYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVT 562



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 170/379 (44%), Gaps = 8/379 (2%)

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQK--GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           S+VR L  LG+++ ++     L  +   L P+   Y+ LL +  +         L  D++
Sbjct: 83  SMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDML 142

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           A    P   ++N+L+  LC+    + A++ F  +P KG  PN  +  IL+R LC  G  +
Sbjct: 143 AARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVK 202

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +A EL+   +   R    V YN L+         + A ++++ M +    P   ++N  I
Sbjct: 203 QALELVNN-NNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRI 261

Query: 351 ARLCSEGKVDLVVKCLDQMFHRR----CKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGN 405
           + LC  GKV    +    M         +PN  T+N  L   C  G + +A  +++++  
Sbjct: 262 SALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKK 321

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
             N    E Y   +  L R G+  +A  +L EM   G  P++YTY+ ++ GLC   ++ +
Sbjct: 322 VGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSD 381

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A  +  +M      PD   ++ LL G C   +   +  V   MI  G  PN  T   L+ 
Sbjct: 382 ARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLH 441

Query: 526 GIAHQDELELSAEVLKELQ 544
            +  +     + E+L+++ 
Sbjct: 442 SLWKEGRTLEAEEMLQKMN 460


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 215/470 (45%), Gaps = 32/470 (6%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M S+G +P+V     LL  LC+  K+  A K++  M + G  PD  SYT +++ +CK G+
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229

Query: 149 VGYAMQLVEKME------------------------------DYGYPTNTVTYNSLVRGL 178
           V  A +L  K E                              D G   N ++Y++++  L
Sbjct: 230 VDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCL 289

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
             +GN+  SL    R+  +G  PN  T++ L++  +    V  A+ L + +I +G  PN+
Sbjct: 290 SDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNV 349

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+YN L+ GLC +G  +EAI  +  +      PNV +Y+ ++      G    A E   +
Sbjct: 350 VAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNK 409

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P +V Y  ++  L      D A  ++D M+     P+  ++N  I  LC  G+
Sbjct: 410 MINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGR 469

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           V+  +  LDQM    C PN  TYN L   L      +EA  +I+ L  ++       Y  
Sbjct: 470 VEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNT 529

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-VVMEEY 476
           ++      G   Q  QLL +M   G   D+ T ++ +   C  G ++ A+++   +  E 
Sbjct: 530 IMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEK 589

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           +++ D+     +L G+C    T+ ++     M+++G  PN  T+ +LV G
Sbjct: 590 EFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRG 639



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 224/477 (46%), Gaps = 16/477 (3%)

Query: 100 QATNLLYD-----LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVG-YAM 153
           + T+L Y+     L + N+M     +++ M    +      + +++ C  ++ N+G   +
Sbjct: 71  KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCY-RRSNLGEQGL 129

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL-DRLIQKGLVPNAFTYSFLLEA 212
           ++  ++ ++G   +   YN ++  L +  NL + +  L + +  +GL PN FTY+ LL+A
Sbjct: 130 KMFYRIREFGCEPSVKIYNLVLDAL-LSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKA 188

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             +   V  A KLL ++  KG  P+ VSY  +++ +CK G  ++A    R+L  K FEP 
Sbjct: 189 LCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA----RELAMK-FEPV 243

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V  YN L+  +C E R++EA +L+ EM      P +++Y+ +I  L+  G  + +L V  
Sbjct: 244 VPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFG 303

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
            M     RP+  ++  +I      G+V   V   + M      PN   YN L   LC  G
Sbjct: 304 RMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDG 363

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            + EA ++   +           Y  +I    + G    A +   +M   G  P+   Y+
Sbjct: 364 NMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYT 423

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            ++  LC   + ++A ++   M      P V  FN  + GLC++ R + ++ V   M + 
Sbjct: 424 CMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKY 483

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM-QYDFEGIE 567
             +PN  TY  L++G+   +    +  +++EL+ R+V  +      +M  + F G+ 
Sbjct: 484 ECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMH 540



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 189/390 (48%), Gaps = 12/390 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +  +AF  +  MV +G  P+V+  + ++  L     ++ ++ V   M   G  P+  
Sbjct: 256 KECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQ 315

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L+     +G VG A+ L   M   G   N V YN+L+ GLC  GN+++++   +++
Sbjct: 316 TFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQM 375

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +  + PN  TYS ++    K   + +A +  + +I  G +PN+V Y  ++  LC+    
Sbjct: 376 EKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMF 435

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A     ++ S G  P V+++N  ++ LC  GR E A  +L +M+  +  P I TYN L
Sbjct: 436 DQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNEL 495

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L        A  ++ E+ + +      +YN I+      G    V++ L +M     
Sbjct: 496 LDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGI 555

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT------SLCRKGK 427
           K +  T N  +   C +GKV+ A  ++ ++     S+ +EF   +IT       +C    
Sbjct: 556 KLDTITVNTTVNAYCKLGKVKTAIKVLDNI-----SAEKEFRADIITHTIILWGICNWLG 610

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           T +A   L+EM K G  P+  T++ L+RG 
Sbjct: 611 TEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            + AF  ++ M+S G  P V+   N +  LC+A +++ A+ V++ M     +P+  +Y  
Sbjct: 435 FDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNE 494

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ L +      A  L+ ++E+     + VTYN+++ G    G   Q LQ L +++  G
Sbjct: 495 LLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNG 554

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA--------------------------- 231
           +  +  T +  + A  K   V  A+K+LD+I A                           
Sbjct: 555 IKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEA 614

Query: 232 ---------KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
                    +G  PN+ ++NVL+ G   +      IR   D+
Sbjct: 615 VVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDI 656



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 71/136 (52%), Gaps = 1/136 (0%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           D V    ++Y        ++ ++++  M+ +GI  D  +    VN  CK G V  A++++
Sbjct: 523 DCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVL 582

Query: 157 EKME-DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + +  +  +  + +T+  ++ G+C      +++ +L  ++++G+ PN  T++ L+   + 
Sbjct: 583 DNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFS 642

Query: 216 ERGVHAAMKLLDDIIA 231
           + G    +++LDDII 
Sbjct: 643 KLGHMGPIRILDDIIG 658


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 252/552 (45%), Gaps = 42/552 (7%)

Query: 50  VTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLC 109
           V I PK +V T          D   ++  L+ AF+  + M   G  PD++  + L+  L 
Sbjct: 299 VRIGPKPNVVTFSTLI-----DAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLF 353

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           KA +++   +++ + +  GI  D   ++  ++   K G++G  +Q+ ++M + G   N V
Sbjct: 354 KAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVV 413

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           + + L++G C  G + ++     ++++ G  P+  TYS L+    K   +     L +D+
Sbjct: 414 SCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC----- 284
           I K  +P+ + Y+VL+ GLCK+G   +A+RFF    ++G  PNV + N LL S C     
Sbjct: 474 IKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCI 533

Query: 285 ------------------------------MEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
                                           GR +EA  L  +M   D  P ++TY  L
Sbjct: 534 VGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTL 593

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K+   L + D M K    P  A YN +I     EG ++  +     +  R  
Sbjct: 594 IDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGP 653

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP+  T+N +    C   ++ +A  +   + ++Q       +  +I + CR+G+   A  
Sbjct: 654 KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAML 713

Query: 434 LLYEMTKYGFTPDSYTYSSLIRG-LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +  +M + G  P+  TYS LI G    + ++E  L+++  M E +  P++ +++ L+ GL
Sbjct: 714 MFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGL 773

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           CK      +   F+  ++K  +P+   YTIL+ G      L  +  +   + L ++  + 
Sbjct: 774 CKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDR 833

Query: 553 AVERLVMQYDFE 564
            +ER + +Y  +
Sbjct: 834 FLERTLEEYQLK 845



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 203/439 (46%), Gaps = 1/439 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +V  G KP+VV  + L+   CK   + KA  + ++M  +G+ PD   Y+ L++ L K G 
Sbjct: 298 VVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGR 357

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +    +L+    D G   + V ++S +     +G+L + +Q   R++ +G+ PN  + S 
Sbjct: 358 LEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSI 417

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   +   +  A  L   I+  G +P++++Y+ L+ G CK G   +    + D+  K 
Sbjct: 418 LIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKR 477

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            EP+ + Y++L+  LC +G   +A     +      SP + T N L+ S         A+
Sbjct: 478 CEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAM 537

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           KV   M     +    +Y  +I      G+VD  +    QM  +  KP+  TY  L   L
Sbjct: 538 KVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGL 597

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C + K      I   +     +     Y  +I    R+G    A  L   + + G  PD 
Sbjct: 598 CKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDV 657

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           +T++++I   C    +++A+++F  M     +P+   F  L+   C+  R D ++ +F  
Sbjct: 658 FTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSK 717

Query: 508 MIEKGQMPNETTYTILVEG 526
           M+E+G  PN  TY+ L+ G
Sbjct: 718 MLEEGPEPNLVTYSCLIHG 736



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 204/472 (43%), Gaps = 71/472 (15%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           S Y +++N    KG V   ++  + +   G+  + +T N +++G+ M  ++  +  + + 
Sbjct: 238 SVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNM 297

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ G  PN  T+S L++A  KE  +  A  L D +   G  P+L+ Y++L+ GL K GR
Sbjct: 298 VVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGR 357

Query: 254 TEEA-----------------------------------IRFFRDLPSKGFEPNVVSYNI 278
            E+                                    I+ ++ + ++G  PNVVS +I
Sbjct: 358 LEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSI 417

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L++  C  GR  EA  L  ++      P+I+TY+ LI      G       + ++M+K R
Sbjct: 418 LIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKR 477

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
             P    Y+ +I  LC +G V   ++   Q  +R   PN  T N L    C +  +  A 
Sbjct: 478 CEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAM 537

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +   +G     +    Y  +I    + G+  +A  L ++M K  F PD  TY +LI GL
Sbjct: 538 KVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGL 597

Query: 458 C-----------------------------------MEGLIEEALEIFVVMEEYDYKPDV 482
           C                                    EG +E AL +FV + E   KPDV
Sbjct: 598 CKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDV 657

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             FN ++   C  +R D ++++F  M  +   PN  T+TIL++    +  ++
Sbjct: 658 FTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMD 709



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 107/481 (22%), Positives = 182/481 (37%), Gaps = 108/481 (22%)

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV--PNAF-------------- 204
           D     ++V Y  L+   C  G  ++S+     +  KG+   PN                
Sbjct: 160 DLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVE 219

Query: 205 -------------------TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
                               Y F++     +  V   ++    ++  G   ++++ N +L
Sbjct: 220 VIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKIL 279

Query: 246 TGL-----------------------------------CKEGRTEEAIRFFRDLPSKGFE 270
            G+                                   CKEG  ++A   F  +   G  
Sbjct: 280 KGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVT 339

Query: 271 PNVVSYNILLRSLCMEGRWEEANELL----------------AEMDG----GDR------ 304
           P+++ Y+IL+  L   GR E+   LL                + MD     GD       
Sbjct: 340 PDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQI 399

Query: 305 ---------SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
                    SP +V+ +ILI     +G+   A  +  +++K  F PS  +Y+ +IA  C 
Sbjct: 400 YKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCK 459

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G +       + M  +RC+P+   Y+ L   LC  G V +A        N+   SP  F
Sbjct: 460 SGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNR-GLSPNVF 518

Query: 415 -YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
               ++ S CR      A ++ Y M       D+ TY+ LI+G    G ++EAL +F  M
Sbjct: 519 TLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQM 578

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            + D+KPDV  +  L+ GLCK +++   L +F  M +    P+   Y +L+   + +  L
Sbjct: 579 LKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHL 638

Query: 534 E 534
           E
Sbjct: 639 E 639



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 1/149 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKM-KKAIKVMEMMVSSGI 129
           D   R+ +++DA L   +M+ +G +P++V  + L++   K+  M +  +K+   M+ + I
Sbjct: 700 DAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNI 759

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+  SY+ L++ LCK+G +  A        D     + + Y  L+RG C +G L +++ 
Sbjct: 760 APNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMM 819

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
             D ++   L P+ F    L E   K+ G
Sbjct: 820 LYDNMLLNRLTPDRFLERTLEEYQLKKAG 848



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 12/225 (5%)

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
           +  Y  +I   C +G  D   K +D   H   K    + N + +L G         +I  
Sbjct: 167 SVVYGFLIESYCRKGMFD---KSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVD 223

Query: 403 ----LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
               L +     P   Y++V+     KG+     +    + + GF  D  T + +++G+ 
Sbjct: 224 KYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIW 283

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
           M+  I  A + F ++     KP+V  F+ L+   CK    D +  +F +M   G  P+  
Sbjct: 284 MQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLI 343

Query: 519 TYTILVEGIAHQDELELSAEVL-----KELQLRQVVSESAVERLV 558
            Y+IL++G+     LE    +L     K ++L  V   SA++  V
Sbjct: 344 VYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYV 388


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 222/461 (48%), Gaps = 3/461 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MVS+G   D+V  T L+  L K  K  +    +   +S  +  +  +YT L++ LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCK 391

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             NV  A Q++ +ME+     N VT++S++ G    G L+++ ++   + ++G+ PN  T
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L++  +K +G  AA+++  D++ +G + N    + L+ GL + G+ EEA+  F+D  
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G   + V+Y  L+  L   G    A +   E+   +  P  V YN+ I  L   GK  
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFK 571

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A  +L EM     +P  ++YN +I   C +G+    +K L +M     KPN  TYN L 
Sbjct: 572 EAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE-MTKYGF 443
           A L G G V++A  ++  + +    SP       +   C + +       ++E M   G 
Sbjct: 632 AGLFGTGAVEKAKYLLNEMVS-AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGL 690

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D   Y++L++ LC  G+  +A  +   M      PD   FNAL+LG CKS   D +  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +  M+ +   PN  T+  L+ G+     +  +  VL E++
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 215/478 (44%), Gaps = 7/478 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +RM ++G   DVV    L+   C+A ++  A  V++MM  +G+ P+ ++YT  +   C+ 
Sbjct: 193 DRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A  L E M   G   + VT ++LV GLC  G  +++      + + G VPN  TY
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTY 312

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L+++  K       + LL +++++G   +LV+Y  L+  L K+G+T+E     R   S
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
                N V+Y +L+ +LC     +EA ++L EM+    SP +VT++ +I      G  D 
Sbjct: 373 DNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN----EGTYN 382
           A +    M +    P+  +Y  +I         D  ++    M     + N    +   N
Sbjct: 433 ATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVN 492

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           GL      GK++EA A+ +       S     Y  +I  L + G    AF+   E+    
Sbjct: 493 GLRQ---NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD+  Y+  I  LC+ G  +EA  I   M     KPD   +N +++  C+   T  +L
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           ++   M      PN  TY  LV G+     +E +  +L E+        S   R V+Q
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 219/466 (46%), Gaps = 4/466 (0%)

Query: 81  DAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           DA L++   M+ +G + +     +L+  L +  K+++A+ + +    SG+  D  +YT L
Sbjct: 466 DAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++ L K G++  A +  +++ D     + V YN  +  LC+LG   ++   L  +   GL
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGL 585

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ ++ +  ++     A+KLL ++     KPNL++YN L+ GL   G  E+A  
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              ++ S GF P+ +++  +L++     R +   ++   M        I  YN L+  L 
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
           YHG T  A  VL+EM+     P   ++N +I   C    +D       QM H+   PN  
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 380 TYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           T+N L   L  VG++ EA  ++  +  K    P    Y  ++T   ++    +A +L  E
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEM-EKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCE 824

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   GF P   TY++LI      G++ +A E+F  M++    P    ++ L+ G  + R 
Sbjct: 825 MVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRN 884

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                +  + M EKG  P++ T + +    +       +  +LK L
Sbjct: 885 GTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 220/472 (46%), Gaps = 5/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   + +AF   E MV  G   DVV  + L+  LC+  +  +A  +   M   G +P+  
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHV 310

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L K G     + L+ +M   G   + VTY +L+  L   G  ++    L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   L  N  TY+ L++A  K   V  A ++L ++  K   PN+V+++ ++ G  K G  
Sbjct: 371 LSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYN 312
           ++A  + R +  +G  PNVV+Y  L+         + A E+  +M  +G + +  IV  +
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIV--D 488

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+  L  +GK + A+ +  +           +Y  +I  L   G +    K   ++  R
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+   YN  +  LC +GK +EA +I+  + N      Q  Y  +I S CRKG+T +A
Sbjct: 549 NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +LL+EM      P+  TY++L+ GL   G +E+A  +   M    + P       +L  
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +SRR D+ L++ + M+  G   + T Y  L++ + +      +  VL+E+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 221/479 (46%), Gaps = 1/479 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + H +++A   L  M  K   P+VV  ++++    K   + KA +   MM   GI 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++   K      A+++   M   G   N    +SLV GL   G + +++  
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
                  GL  +   Y+ L++  +K   +  A K   +++ +   P+ V YNV +  LC 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCI 566

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EA     ++ + G +P+  +YN ++ S C +G   +A +LL EM      P ++T
Sbjct: 567 LGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN L+  L   G  + A  +L+EMV   F PS+ ++  ++       ++D+++   + M 
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +     +   YN  L +LC  G  ++A  +++ +     +     +  +I   C+     
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF    +M     +P+  T+++L+ GL   G I EA  + + ME+   +P+   ++ L+
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILV 806

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            G  K      ++ ++  M+ KG +P  +TY  L+        +  + E+ K++Q R V
Sbjct: 807 TGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 199/441 (45%), Gaps = 12/441 (2%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           LLY  C+   ++ AI ++    SS   P   +Y  L+  L       +A  ++ +M   G
Sbjct: 79  LLYSHCRLRLLRPAIALLR---SSR--PTTVAYNILLAALSDHA---HAPAVLAEMCKRG 130

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL-VPNAFTYSFLLEAAYKERGVHAA 222
            P + VT N+L+ GLC  G ++ +    DR    G+   +   ++ L+    +     AA
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGDTPAA 188

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           + + D + A+G   ++V YN L+ G C+ G+ + A      +   G +PNV +Y   +  
Sbjct: 189 LSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVY 248

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C     EEA +L   M        +VT + L+  L   G+   A  +  EM K    P+
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPN 308

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQ 401
             +Y  +I  L   G+   ++  L +M  R    +  TY  L    G  GK  E    ++
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR 368

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
              +   S     Y  +I +LC+     +A Q+L EM +   +P+  T+SS+I G    G
Sbjct: 369 FALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRG 428

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
           L+++A E   +M+E    P+V  +  L+ G  K +  D +LEV+  M+ +G   N+    
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVD 488

Query: 522 ILVEGIAHQDELELSAEVLKE 542
            LV G+    ++E +  + K+
Sbjct: 489 SLVNGLRQNGKIEEAMALFKD 509



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 117/250 (46%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M++ G   D+     LL  LC     +KA  V+E M+ SGI PD  ++  L+   CK 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            ++  A     +M       N  T+N+L+ GL  +G + ++   L  + + GL PN  TY
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             L+    K+     AM+L  +++ KG  P + +YN L++   K G   +A   F+D+  
Sbjct: 803 DILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  P   +Y+IL+          E  + L +M     SP+  T + +  + +  G T  
Sbjct: 863 RGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQ 922

Query: 327 ALKVLDEMVK 336
           A ++L  + +
Sbjct: 923 AQRLLKNLYR 932



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 130/318 (40%), Gaps = 16/318 (5%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+  L   G    AIRF    P+        S N LL S C       A  LL       
Sbjct: 52  LIPALATSGLAAAAIRFRPADPA--------SLNALLYSHCRLRLLRPAIALLRS----- 98

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             PT V YNIL+ +L+ H    HA  VL EM K        + N ++A LC  G+VD   
Sbjct: 99  SRPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
              D+          G    +A  C VG    A ++   +  +        Y  ++   C
Sbjct: 156 ALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R G+   A  +L  M + G  P+  TY+  I   C    +EEA +++  M       DV 
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +AL+ GLC+  R   +  +F+ M + G +PN  TY  L++ +A     +    +L E+
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 544 QLRQVVSESAVERLVMQY 561
             R VV +      +M +
Sbjct: 336 VSRGVVMDLVTYTALMDW 353



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 87/190 (45%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   L++AF    +M+ +   P++     LL  L    ++ +A  V+  M  SG+ P+  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  LV    K+ N   AM+L  +M   G+     TYN+L+      G + Q+ +    +
Sbjct: 801 TYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P + TY  L+    + R      K L D+  KG  P+  + + +     K G T
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 255 EEAIRFFRDL 264
            +A R  ++L
Sbjct: 921 WQAQRLLKNL 930


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 225/488 (46%), Gaps = 26/488 (5%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H L  A      M++ G   + +  ++    LC A K +KA  V+  M+  G IPD S+Y
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           + ++  LC    +  A  L E+M+  G   +  TY  +V   C  G + Q+ ++ + + +
Sbjct: 487 SKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G  PN  TY+ L+ A  K + V  A +L + ++++G  PN+V+Y+ L+ G CK G+ E+
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEK 606

Query: 257 AIRFF------RDLPS-----KGFE------PNVVSYNILLRSLCMEGRWEEANELLAEM 299
           A + F      +D+P      K ++      PNVV Y  LL   C   R EEA +LL  M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAM 666

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P  + Y+ LI  L   GK D A +V  EM +  F  +  +Y+ +I R     + 
Sbjct: 667 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQ 726

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           DL  K L +M    C PN   Y  +   LC VGK  EA+ ++Q +  K        Y  +
Sbjct: 727 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 786

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I    R GK     +LL  M   G  P+  TY  LI   C  G ++ A  +   M++  +
Sbjct: 787 IDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 846

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ---MPNETTYTILVEGIAHQDELEL 535
                 +  ++ G  K       +E   ++ E GQ    P  + Y +LV+ +     LE+
Sbjct: 847 PTHAAGYRKVIEGFNKE-----FIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEM 901

Query: 536 SAEVLKEL 543
           +  +L+E+
Sbjct: 902 ALRLLEEV 909



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 226/505 (44%), Gaps = 57/505 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   AF  +  M+ +G  PD    + +L  LC A+KM+ A  + E M   G++ D  +YT
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V+  CK G +  A +   +M + G   N VTY +L+        ++ + +  + ++ +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-----------------GGKPNLVS 240
           G +PN  TYS L++   K   +  A ++ + +                      +PN+V 
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVI 642

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y  LL G CK  R EEA +    +  +G EPN + Y+ L+  LC  G+ +EA E+ AEM 
Sbjct: 643 YGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMS 702

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                 T+ TY+ LI       + D A KVL +M++    P+   Y  +I  LC  GK D
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
              K +  M  + C+PN  TY   AM+ G   +GK++    +++ +G+K  +     Y+ 
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYT--AMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRV 820

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME-----GLIEEALEIFVV 472
           +I   C+ G    A  LL EM +  +   +  Y  +I G   E     GL++E  +    
Sbjct: 821 LIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTA 880

Query: 473 MEEYDYKPDVDN------------------------------FNALLLGLCKSRRTDLSL 502
                Y+  VDN                              +N+L+  LC + + D + 
Sbjct: 881 PFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAF 940

Query: 503 EVFQMMIEKGQMPNETTYTILVEGI 527
            +F  M +KG +P   T+  L++G+
Sbjct: 941 RLFSEMSKKGVIPEMQTFCSLIKGL 965



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 133/544 (24%), Positives = 237/544 (43%), Gaps = 64/544 (11%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM +    P+VV  + LL       ++ +  +V+ MM+  G  P    +  LV+  C 
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLV------------------------------ 175
            G+  YA +L++KM   G+    V YN L+                              
Sbjct: 385 SGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGV 444

Query: 176 -----------RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
                      R LC  G   ++   +  +I +G +P+  TYS +L        +  A  
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFL 504

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           L +++   G   ++ +Y +++   CK G  E+A ++F ++   G  PNVV+Y  L+ +  
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF----- 339
              +   ANEL   M      P IVTY+ LI      G+ + A ++ + M   +      
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVD 624

Query: 340 ------------RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
                       RP+   Y  ++   C   +V+   K LD M    C+PN+  Y+ L   
Sbjct: 625 MYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 684

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFT 444
           LC VGK+ EA  +   +   ++  P   Y Y  +I    +  +   A ++L +M +    
Sbjct: 685 LCKVGKLDEAQEVKAEMS--EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 742

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+   Y+ +I GLC  G  +EA ++  +MEE   +P+V  + A++ G  +  + +  LE+
Sbjct: 743 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLEL 802

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ-YDF 563
            + M  KG  PN  TY +L++       L+++  +L+E++     + +A  R V++ ++ 
Sbjct: 803 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK 862

Query: 564 EGIE 567
           E IE
Sbjct: 863 EFIE 866



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 192/402 (47%), Gaps = 22/402 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY--------- 136
            E M+S+G  P++V  + L+   CKA +M+KA ++ E M  S  +PD   Y         
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNS 635

Query: 137 --------TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
                     L++  CK   V  A +L++ M   G   N + Y++L+ GLC +G L+++ 
Sbjct: 636 ERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 695

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           +    + + G     +TYS L++  +K +    A K+L  ++     PN+V Y  ++ GL
Sbjct: 696 EVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 755

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CK G+T+EA +  + +  KG +PNVV+Y  ++      G+ E   ELL  M     +P  
Sbjct: 756 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNY 815

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VTY +LI     +G  D A  +L+EM +  +   AA Y  +I     E    L +  LD+
Sbjct: 816 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGL--LDE 873

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS--SPQEFYKYVITSLCRK 425
           +      P    Y  L   L    +++ A  +++ +     +       Y  +I SLC  
Sbjct: 874 IGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLA 933

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            K  +AF+L  EM+K G  P+  T+ SLI+GL     I EAL
Sbjct: 934 NKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEAL 975



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 217/478 (45%), Gaps = 53/478 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  AFL  E M   G   DV   T ++   CKA  +++A K    M   G  P+  +YT
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++   K   V YA +L E M   G   N VTY++L+ G C  G + ++ Q  +R+   
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGS 617

Query: 198 GLVP-----------------NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
             VP                 N   Y  LL+   K   V  A KLLD +  +G +PN + 
Sbjct: 618 KDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIV 677

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y+ L+ GLCK G+ +EA     ++   GF   + +Y+ L+       R + A+++L++M 
Sbjct: 678 YDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 737

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
               +P +V Y  +I  L   GKTD A K++  M +   +P+  +Y  +I      GK++
Sbjct: 738 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIE 797

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLC--------------------------GVGKVQ 394
             ++ L++M  +   PN  TY  L   C                          G  KV 
Sbjct: 798 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVI 857

Query: 395 EAF--AIIQSLG-----NKQNSSP-QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           E F    I+SLG      + +++P    Y+ ++ +L +  +   A +LL E+  +  T  
Sbjct: 858 EGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLV 917

Query: 447 SY--TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            Y  TY+SLI  LC+   +++A  +F  M +    P++  F +L+ GL ++ +   +L
Sbjct: 918 DYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEAL 975



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 239/537 (44%), Gaps = 63/537 (11%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY-TYLVNCLC 144
           L  M ++   PD V  T L+  LC+A+  ++A+  +  M ++  +P+  +Y T L  CL 
Sbjct: 290 LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 145 KKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           KK  +G   +++  M   G YP+  + +NSLV   C  G+ + + + L ++++ G  P  
Sbjct: 350 KK-QLGRCKRVLNMMMMEGCYPSPKI-FNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGY 407

Query: 204 FTYSFLLEAAYKERG------VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             Y+ L+ +   ++       +  A K   +++A G   N ++ +     LC  G+ E+A
Sbjct: 408 VVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKA 467

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               R++  +GF P+  +Y+ +L  LC   + E A  L  EM  G     + TY I++ S
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  + A K  +EM +    P+  +Y  +I       KV    +  + M    C PN
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSL-GNKQNSSPQEFYKY----------------VI 419
             TY+ L    C  G++++A  I + + G+K       ++K                 ++
Sbjct: 588 IVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALL 647

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY- 478
              C+  +  +A +LL  M+  G  P+   Y +LI GLC  G ++EA E+   M E+ + 
Sbjct: 648 DGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFP 707

Query: 479 ----------------------------------KPDVDNFNALLLGLCKSRRTDLSLEV 504
                                              P+V  +  ++ GLCK  +TD + ++
Sbjct: 708 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 767

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            QMM EKG  PN  TYT +++G     ++E   E+L+ +  + V       R+++ +
Sbjct: 768 MQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 824



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 211/470 (44%), Gaps = 49/470 (10%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  LV+ + +  +     +L++++ D          N LVR  C  G+ + +L+ L RL 
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLK 227

Query: 196 QKGLVPNAFTYSFLLEAAYKERG------VHAAMKL----LDDI--------IAKGGK-- 235
                P+  TY+ L++A  K         VH  M L    +D          + K GK  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWR 287

Query: 236 ------------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                       P+ V Y  L++GLC+    EEA+ F   + +    PNVV+Y+ LL   
Sbjct: 288 EALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG- 346

Query: 284 CME----GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           C+     GR +    ++  M+G   SP I  +N L+ +    G   +A K+L +MVK   
Sbjct: 347 CLNKKQLGRCKRVLNMMM-MEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403

Query: 340 RPSAASYNPIIARLCSEGK------VDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
            P    YN +I  +C +        ++L  K   +M       N+   +     LC  GK
Sbjct: 404 TPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGK 463

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            ++AF++I+ +  +        Y  V+  LC   K   AF L  EM + G   D YTY+ 
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           ++   C  GLIE+A + F  M E    P+V  + AL+    K+++   + E+F+ M+ +G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
            +PN  TY+ L++G     ++E + ++ + +   + V +  V+    QYD
Sbjct: 584 CLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPD--VDMYFKQYD 631



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 8/301 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL++A      M   G    +   ++L+    K  +   A KV+  M+ +   P+   YT
Sbjct: 690 KLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 749

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK G    A +L++ ME+ G   N VTY +++ G   +G +   L+ L+R+  K
Sbjct: 750 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSK 809

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  TY  L++   K   +  A  LL+++       +   Y  ++ G  KE    E+
Sbjct: 810 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE--FIES 867

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV----TYNI 313
           +    ++      P +  Y +L+ +L    R E A  LL E+     S T+V    TYN 
Sbjct: 868 LGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNS 925

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI SL    K D A ++  EM K    P   ++  +I  L    K+   +  LD + H  
Sbjct: 926 LIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMV 985

Query: 374 C 374
           C
Sbjct: 986 C 986



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 152/376 (40%), Gaps = 29/376 (7%)

Query: 183 NLNQSLQFL-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL--- 238
           +L +   FL D L+  G V        + +++   R +  A+   DD+     +  L   
Sbjct: 67  DLTKEYSFLHDSLLDSGNVDLHQVVPIITQSSIDARAIADAVSGGDDVFGSKSQKFLRQF 126

Query: 239 ---VSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANE 294
              +S ++++  L    R    I FF     + G++     YN L+  +  +   +   E
Sbjct: 127 REKLSESLVIEVLRLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEE 186

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           LL ++   D+       N+L+      G    AL+ L  +   RFRPS ++YN +I    
Sbjct: 187 LLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF- 245

Query: 355 SEGKVDLVVKCLD--QMFHRRCKPNEGTYNGLAM------LCGVGKVQEAFAIIQSLGNK 406
                 L   CLD   + HR         +G  +      LC VGK +EA  ++++    
Sbjct: 246 ------LKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMET---- 295

Query: 407 QNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           +N  P   FY  +I+ LC      +A   L  M      P+  TYS+L+ G   +  +  
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 355

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
              +  +M      P    FN+L+   C S     + ++ + M++ G  P    Y IL+ 
Sbjct: 356 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIG 415

Query: 526 GIAHQDELELSAEVLK 541
            I   D+  LS  +L+
Sbjct: 416 SIC-GDKDSLSCHLLE 430


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 237/499 (47%), Gaps = 4/499 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GI 129
           D   R H+   A     +++  G + +++ A +LL   C+A +  +A+ ++       G 
Sbjct: 119 DCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGC 178

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--PTNTVTYNSLVRGLCMLGNLNQS 187
           +PD  SY+ L+  LC +G  G A  L+  M + G     + V Y++++ G    G++N++
Sbjct: 179 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKA 238

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                 ++Q+G+ P+  TYS ++ A  K R +  A   L  ++ KG  PN  +YN L+ G
Sbjct: 239 CDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG 298

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               G+ +EA+R F+++      P+VV+ ++L+ SLC  G+ +EA ++   M    ++P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPN 358

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +Y I++   A  G       + D M+     P   ++N +I    + G +D  +   +
Sbjct: 359 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M     KP+  TY   +A LC +GK+ +A      + ++  +  +  Y  +I   C  G
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              +A +L+ E+   G   D   +SS+I  LC  G + +A  IF +       P    ++
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            L+ G C   + + +L VF  M+  G  PN+  Y  LV G      ++    + +E+  +
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598

Query: 547 QVVSESAVERLVMQYDFEG 565
            +   + +  +++   FE 
Sbjct: 599 GIKPSTILYNIIIDGLFEA 617



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 229/465 (49%), Gaps = 3/465 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AFL+  +MV+KG  P+     NL+Y      + K+A++V + M    I+PD  + + L+
Sbjct: 274 EAFLR--QMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCK G +  A  + + M   G   N  +Y  ++ G    G L       D ++  G+ 
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ +T++ L++A      +  AM + +++   G KP++V+Y  ++  LC+ G+ ++A+  
Sbjct: 392 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +  +G  P+  +Y+ L++  C  G   +A EL++E+        IV ++ +I +L  
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+   A  + D  V     P+A  Y+ ++   C  GK++  ++  D M     +PN+  
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  L    C +G++ E  ++ + +  K        Y  +I  L   G+T  A    +EMT
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G   +  TY+ ++RGL      +EA+ +F  +   + K ++   N ++ G+ ++RR +
Sbjct: 632 ESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVE 691

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + ++F  +   G +P   TY+I++  +  +  +E + ++   +Q
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 217/471 (46%), Gaps = 10/471 (2%)

Query: 85  QLERMVSKGH---KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            L RM+++G     PDVV  + ++    K   + KA  + + MV  GI PD  +Y+ +V+
Sbjct: 203 DLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVH 262

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK   +  A   + +M + G   N  TYN+L+ G    G   ++++    + +  ++P
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 322

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  T S L+ +  K   +  A  + D +  KG  PN+ SY ++L G   +G   +    F
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLF 382

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G  P++ ++N+L+++    G  ++A  +  EM      P +VTY  +I +L   
Sbjct: 383 DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 442

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCLDQMFHRRCKPN 377
           GK D A++  ++M+     P   +Y+ +I   C+ G +    +L+ + ++   H      
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
               N    LC +G+V +A  I     N         Y  ++   C  GK  +A ++   
Sbjct: 503 SSIINN---LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  P+   Y +L+ G C  G I+E L +F  M +   KP    +N ++ GL ++ R
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           T  +   F  M E G   N+ TY I++ G+      + +  + KEL+   V
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 670



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 195/452 (43%), Gaps = 39/452 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
           P + +Y  L++C  +      A+    ++   G   N +  N L++G C     +++L  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAA------------------------------------ 213
            L R  + G VP+ F+YS LL++                                     
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 214 -YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
            +KE  V+ A  L  +++ +G  P+ V+Y+ ++  LCK    ++A  F R + +KG  PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             +YN L+      G+W+EA  +  EM      P +VT ++L+GSL  +GK   A  V D
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVG 391
            M      P+  SY  ++    ++G +  +    D M      P+  T+N L       G
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            + +A  I   + +         Y+ VI +LCR GK   A +   +M   G  PD Y Y 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            LI+G C  G + +A E+   +       D+  F++++  LCK  R   +  +F + +  
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           G  P    Y++L++G     ++E +  V   +
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 174/385 (45%), Gaps = 41/385 (10%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P + TY+ L++   +      A+     ++  G + N++  N LL G C+  RT+EA+
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 259 R-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILI 315
                  P  G  P+V SY+ILL+SLC +G+  +A++LL  M  G    SP +V Y+ +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  + A  +  EMV+    P   +Y+ ++  LC    +D     L QM ++   
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 376 PNEGTYNGL------------------------------------AMLCGVGKVQEAFAI 399
           PN  TYN L                                      LC  GK++EA  +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 400 IQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
             ++  K   +P  F Y  ++     KG       L   M   G  PD YT++ LI+   
Sbjct: 347 FDTMAMK-GQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 405

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G++++A+ IF  M ++  KPDV  +  ++  LC+  + D ++E F  MI++G  P++ 
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465

Query: 519 TYTILVEGIAHQDELELSAEVLKEL 543
            Y  L++G      L  + E++ E+
Sbjct: 466 AYHCLIQGFCTHGSLLKAKELISEI 490



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 190/420 (45%), Gaps = 5/420 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    + M  KG  P+V   T +L        +     + ++M+  GI PD  ++ 
Sbjct: 339 KIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFN 398

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+      G +  AM +  +M D+G   + VTY +++  LC +G ++ +++  +++I +
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ + Y  L++       +  A +L+ +I+  G   ++V ++ ++  LCK GR  +A
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F    + G  P  V Y++L+   C+ G+ E+A  +   M      P  V Y  L+  
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D  L +  EM++   +PS   YN II  L   G+         +M       N
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 638

Query: 378 EGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           + TYN   +L G+ K     EA  + + L              +I  + +  +  +A  L
Sbjct: 639 KCTYN--IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDL 696

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              +++ G  P   TYS +I  L  EGL+EEA ++F  M+    +PD    N ++  L K
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 178/388 (45%), Gaps = 6/388 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A +    M   G KPDVV    ++  LC+  KM  A++    M+  G+ PD  +Y  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C  G++  A +L+ ++ + G   + V ++S++  LC LG +  +    D  +  G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P A  YS L++       +  A+++ D +++ G +PN V Y  L+ G CK GR +E +
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  KG +P+ + YNI++  L   GR   A     EM     +    TYNI++  L
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGL 649

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             +   D A+ +  E+     + +  + N +IA +    +V+        +      P  
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCV 709

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY+ +   L   G V+EA  +  S+ N           +V+  L +K +  +A   L +
Sbjct: 710 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 769

Query: 438 MTKYGFTPDSYTYSSLI-----RGLCME 460
           + +  F+ +  T   L+     +G C E
Sbjct: 770 IDERNFSLEHLTTMLLVDLFSSKGTCRE 797



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 67/143 (46%), Gaps = 4/143 (2%)

Query: 410 SPQEFYKYVITSLC-RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           SP      ++   C R  +   A     ++ + G   +    + L++G C     +EAL+
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167

Query: 469 IFV-VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM--PNETTYTILVE 525
           I +    E    PDV +++ LL  LC   ++  + ++ +MM E G +  P+   Y+ +++
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVID 227

Query: 526 GIAHQDELELSAEVLKELQLRQV 548
           G   + ++  + ++ KE+  R +
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGI 250


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 206/439 (46%), Gaps = 34/439 (7%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+V     ++  LCK  ++ +A  +   M + G  PD  +Y  L++   K G++    QL
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           V +M   G   + VTYN+L+      G + ++  +   + ++G+V N  T+S  ++A  K
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           E  V  AMKL   +  +G  PN  +Y  L+ G CK GR ++AI    ++  +G  PNVV+
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y +++  LC EG+  EA+ +L+ M+ G      + Y  LI     +  ++ AL +L++M 
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
                   + Y  +I  LC + KVD     L +M     +PN                  
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN------------------ 479

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
                              Y  ++ +L + GK  +A  LL+++   GF P+  TY +LI 
Sbjct: 480 ----------------TVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALID 523

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GLC  G I EA+  F  M E    P+V  + AL+ G CK    + ++ +   MI+KG   
Sbjct: 524 GLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSL 583

Query: 516 NETTYTILVEGIAHQDELE 534
           ++  YT L++G   Q  L+
Sbjct: 584 DKVVYTSLIDGYMKQANLQ 602



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 211/461 (45%), Gaps = 7/461 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM + G  PDVV   +L+    K   +++  +++  M  SG   D  +Y  L+NC  K G
Sbjct: 225 RMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFG 284

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A     +M+  G   N VT+++ V   C  G + ++++   ++  +G++PN FTY+
Sbjct: 285 RMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYT 344

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++   K   +  A+ LLD+++ +G  PN+V+Y V++ GLCKEG+  EA      +   
Sbjct: 345 SLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERG 404

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G + N + Y  L+    M    E A +LL +M        +  Y  LI  L    K D A
Sbjct: 405 GVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEA 464

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
             +L +M     RP+   Y  I+  L   GK    V  L ++     +PN  TY  L   
Sbjct: 465 KSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDG 524

Query: 387 LCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           LC  G + EA   F  ++ LG   N    + Y  +I   C+ G   +A  L+ EM   G 
Sbjct: 525 LCKAGSISEAISHFNKMRELGLDPNV---QAYTALIDGFCKIGSLNKAMHLMNEMIDKGM 581

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           + D   Y+SLI G   +  +++A  +   M E   + D+  +   + G C       +  
Sbjct: 582 SLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARG 641

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           V   MI  G  P++T Y  L+        +E ++ +  E++
Sbjct: 642 VLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 193/410 (47%), Gaps = 5/410 (1%)

Query: 85  QLERMVSK----GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           ++E++VS+    G   DVV    L+    K  +M+KA      M   G++ +  +++  V
Sbjct: 253 EVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFV 312

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +  CK+G V  AM+L  +M   G   N  TY SLV G C  G L+ ++  LD ++ +GLV
Sbjct: 313 DAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV 372

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN  TY+ +++   KE  V  A  +L  +   G K N + Y  L+ G      +E A+  
Sbjct: 373 PNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDL 432

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              + +KG E +V  Y  L+  LC + + +EA  LL +M G    P  V Y  ++ +L  
Sbjct: 433 LNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFK 492

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK   A+ +L +++   F+P+  +Y  +I  LC  G +   +   ++M      PN   
Sbjct: 493 AGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQA 552

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  L    C +G + +A  ++  + +K  S  +  Y  +I    ++     AF L  +M 
Sbjct: 553 YTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMI 612

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           + G   D Y Y+  I G C   +++EA  +   M      PD   +N L+
Sbjct: 613 ESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 90/187 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K ++A   L +++  G +P+VV    L+  LCKA  + +AI     M   G+ 
Sbjct: 488 DALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLD 547

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++  CK G++  AM L+ +M D G   + V Y SL+ G     NL  +   
Sbjct: 548 PNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL 607

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++I+ GL  + + Y+  +        +  A  +L ++I  G  P+   YN L+    K
Sbjct: 608 KTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQK 667

Query: 251 EGRTEEA 257
            G  EEA
Sbjct: 668 LGNMEEA 674



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 103/278 (37%), Gaps = 73/278 (26%)

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G  RS      + L+  LA HG  D A++ L  + + R  P+  + N I+ RL    +  
Sbjct: 127 GPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG 186

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           LV +  D +      PN  T+N                                   VI 
Sbjct: 187 LVRRLFDLLP----VPNVFTFN----------------------------------IVID 208

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            LC++G+  +A  L   M   G +PD  TY+SLI G    G +EE  ++   M +     
Sbjct: 209 FLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAA 268

Query: 481 DVDNFNALL-----------------------------------LGLCKSRRTDLSLEVF 505
           DV  +NAL+                                      CK      ++++F
Sbjct: 269 DVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLF 328

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             M  +G MPNE TYT LV+G      L+ +  +L E+
Sbjct: 329 AQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 366



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 52/107 (48%)

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+ +T++ +I  LC EG + EA  +FV M+     PDV  +N+L+ G  K    +   +
Sbjct: 197 VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQ 256

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           +   M + G   +  TY  L+   +    +E +     E++ + VV+
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVA 303


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 223/471 (47%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + DA      M  +G  P V     LL  L K  K+       + M++  + PD S
Sbjct: 110 REGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVS 169

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LC +G +  A  L++KME+ GY  + VTYN+++   C  G    +L+ +D++
Sbjct: 170 TFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQM 229

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG+  +A TY+ L++   K         LL  +  +   PN ++YN ++ G  KEG+ 
Sbjct: 230 GSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKI 289

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A R F+++      PN V+YN L+   C +G +E+A  +L  M+     P  V+Y+ L
Sbjct: 290 GAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSAL 349

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  H K + +  +L+ M          +Y  +I  LC  G ++  VK LD+M     
Sbjct: 350 LNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGV 409

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  T++ L    C VGK++    II  +     +     Y  +I + C+ G   +AF+
Sbjct: 410 VPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFK 469

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M++ G+  + +  + L+  LC +G +  A   F  M +    P+   F+ ++ G  
Sbjct: 470 VYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYG 529

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            S     +  +F  MI+ G  P+  TY  L++ +    + + +  +L +L 
Sbjct: 530 NSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLH 580



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 235/519 (45%), Gaps = 42/519 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+   +L  + M+++   PDV     L+  LC   K+KKA  +++ M  SG +P   
Sbjct: 145 KERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVV 204

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++N  CKKG    A++L+++M   G   +  TYN LV  LC      +    L ++
Sbjct: 205 TYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKM 264

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ + PN  TY+ ++    KE  + AA ++  ++      PN V+YN L+ G C +G  
Sbjct: 265 RKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNF 324

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+     + + G +PN VSY+ LL  LC   ++E +  +L  M         + Y  +
Sbjct: 325 EQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAM 384

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L  +G  + ++K+LD+M+K    P   +++ +I   C  GK+  V + + +M+    
Sbjct: 385 IDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT----- 428
            PN   Y  L    C  G V EAF +  ++      +       +++SLC+ GK      
Sbjct: 445 APNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEY 504

Query: 429 ------------------------------YQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
                                          +AF +  EM K G  P  +TY  L++ LC
Sbjct: 505 FFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALC 564

Query: 459 MEGLIEEALEIFVVMEEYDYKP---DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
             G  +EA  +   +++  Y P   D   +N +L+   KS     ++ +F  M+++  +P
Sbjct: 565 RAGKFKEAKRL---LDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLP 621

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           +  TY I+  G+  + ++  +      L  +  VS   V
Sbjct: 622 DSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKV 660



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 230/498 (46%), Gaps = 10/498 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D    D     A   LE M + G KP+ V  + LL  LC+  K + +  ++E M  +G+I
Sbjct: 316 DGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMI 375

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
               +YT +++ LC+ G +  +++L++KM   G   + VT++ L+ G C +G +    + 
Sbjct: 376 VGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEI 435

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + ++ + GL PN+  Y+ L+    K   V  A K+   +   G   N    NVL++ LCK
Sbjct: 436 ICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCK 495

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +G+   A  FF  +   G  PN ++++ ++      G   +A  +  EM      P+  T
Sbjct: 496 DGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFT 555

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA---ASYNPIIARLCSEGKVDLVVKCLD 367
           Y  L+ +L   GK   A ++LD++    + PSA    +YN I+      G +   V   D
Sbjct: 556 YGGLLKALCRAGKFKEAKRLLDKL---HYIPSAVDTVTYNTILVETFKSGMLTDAVALFD 612

Query: 368 QMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRK 425
           +M  R   P+  TY  + A L   GK+  A     +L  K   SP++  Y   +  L R 
Sbjct: 613 EMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRA 672

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE-YDYKPDVDN 484
           G++  A     +M K G   D    + ++ G    G + +A +IF +M       P +  
Sbjct: 673 GQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLAT 732

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N LL G  K +       ++ +M+  G  P++ T   L+ G      L++  ++LK++ 
Sbjct: 733 YNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKML 792

Query: 545 LRQV-VSESAVERLVMQY 561
           L  V V +     L+M+Y
Sbjct: 793 LDGVAVDQCTFNMLIMKY 810



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 6/366 (1%)

Query: 164 YP---TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
           YP   +N   ++ L+R     G +  +L+    +  +G  P+ +T + LL    KER V 
Sbjct: 91  YPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVG 150

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A      +++A+   P++ ++N+L+  LC EG+ ++A    + +   G+ P+VV+YN +L
Sbjct: 151 AVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVL 210

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
              C +GR++ A EL+ +M          TYN+L+  L  + ++     +L +M K    
Sbjct: 211 NWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMIS 270

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI 399
           P+  +YN II     EGK+    +   +M      PN  TYN L    C  G  ++A  I
Sbjct: 271 PNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTI 330

Query: 400 IQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           ++ +       P E  Y  ++  LCR  K   +  +L  M   G       Y+++I GLC
Sbjct: 331 LEMM-EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLC 389

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             GL+ E++++   M +    PDV  F+ L+ G C+  +     E+   M + G  PN  
Sbjct: 390 RNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSI 449

Query: 519 TYTILV 524
            YT L+
Sbjct: 450 IYTTLI 455



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 185/431 (42%), Gaps = 36/431 (8%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           + S +  L+    ++G VG A++    M   G+  +  T N L+  L     +     F 
Sbjct: 97  NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++ + + P+  T++ L+     E  +  A  LL  +   G  P++V+YN +L   CK+
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR + A+     + SKG E +  +YN+L+  LC   R  +   LL +M     SP  +TY
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N +I      GK   A ++  EM      P+  +YN +I   C +G  +  +  L+ M  
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              KPNE +Y+ L   LC   K + + +I++ +           Y  +I  LCR G   +
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE-------------------------- 464
           + +LL +M K G  PD  T+S LI G C  G I+                          
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIY 456

Query: 465 ---------EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
                    EA +++V M    Y  +    N L+  LCK  +  ++   F  M + G +P
Sbjct: 457 NYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVP 516

Query: 516 NETTYTILVEG 526
           N  T+  ++ G
Sbjct: 517 NSITFDCIING 527



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 160/319 (50%), Gaps = 3/319 (0%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           K N   +++L+    +EG   +A+  FR +  +GF P+V + N+LL  L  E +      
Sbjct: 95  KSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
              EM      P + T+NILI  L   GK   A  +L +M +  + PS  +YN ++   C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            +G+    ++ +DQM  +  + +  TYN L   LC   +  + + +++ +  K+  SP E
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKM-RKRMISPNE 273

Query: 414 F-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  +I    ++GK   A ++  EM+     P+  TY++LI G C +G  E+AL I  +
Sbjct: 274 ITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEM 333

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           ME    KP+  +++ALL GLC+  + +LS  + + M   G +     YT +++G+     
Sbjct: 334 MEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGL 393

Query: 533 LELSAEVLKELQLRQVVSE 551
           L  S ++L ++    VV +
Sbjct: 394 LNESVKLLDKMLKDGVVPD 412



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 213/528 (40%), Gaps = 42/528 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+  LN++   L++M+  G  PDVV  + L+   C+  K+K   +++  M  +G+ 
Sbjct: 386 DGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLA 445

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P++  YT L+   CK G+V  A ++   M   GY  N    N LV  LC  G +  +  F
Sbjct: 446 PNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYF 505

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + + G VPN+ T+  ++           A  + D++I  G  P+  +Y  LL  LC+
Sbjct: 506 FHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCR 565

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EA R    L       + V+YN +L      G   +A  L  EM   +  P   T
Sbjct: 566 AGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYT 625

Query: 311 YNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSEGKVDLVVK-CLDQ 368
           Y I+   L   GK   AL     ++ KG   P    Y   +  L   G+    +  C D 
Sbjct: 626 YAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDM 685

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGK 427
             +  C     T   L     +GK+ +A  I   + +    SP    Y  ++    +K  
Sbjct: 686 EKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKN 745

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE----------------------- 464
             +   L   M + G  PD  T  SLI G C   +++                       
Sbjct: 746 LSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNM 805

Query: 465 ------------EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
                       +A ++  +M  +D  PD+   ++++  L +      S  +   M+E+G
Sbjct: 806 LIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERG 865

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV----VSESAVER 556
            +P+   Y  LV  +     +  + ++  E++   +    V+ESA+ R
Sbjct: 866 CIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVR 913



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 215/508 (42%), Gaps = 39/508 (7%)

Query: 82   AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            AF   + M+  GH P       LL  LC+A K K+A ++++ +       D  +Y  ++ 
Sbjct: 537  AFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILV 596

Query: 142  CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV- 200
               K G +  A+ L ++M       ++ TY  +  GL   G +  +L F   L+ KG V 
Sbjct: 597  ETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVS 656

Query: 201  PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            P    Y+  ++  ++     AA+   +D+   G   +L++ NV+L G  + G+  +A   
Sbjct: 657  PEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDI 716

Query: 261  FRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELL----------------------- 296
            F  + S     P++ +YNILL     +    + + L                        
Sbjct: 717  FTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFC 776

Query: 297  --AEMDGGDRSPTI----------VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
              A +D G +               T+N+LI       +   A  +++ M      P   
Sbjct: 777  KSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMT 836

Query: 345  SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL 403
            +++ II+ L     V      L +M  R C P+   Y  L   +C +G +  AF +   +
Sbjct: 837  THDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEM 896

Query: 404  GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                 SS       ++  L + GK  +A  +L  M +    P   T+++L+   C    +
Sbjct: 897  EALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESL 956

Query: 464  EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
             EAL++   M+  D K DV  +N L+ GLC       +L++++ + ++G  PN TTY IL
Sbjct: 957  VEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCIL 1016

Query: 524  VEGIAHQDELELSAEV-LKELQLRQVVS 550
            ++ I   D      EV LK+LQ R V+S
Sbjct: 1017 IDAIFTNDISLAKGEVLLKDLQERGVIS 1044



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 75/140 (53%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R   ++ AF   + M + G     V  + L+  L K  K+++A  V++ M+   +IP  +
Sbjct: 882  RMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIA 941

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++T L++  C+  ++  A++L + M+      + + YN L+ GLC  G++  +L+    +
Sbjct: 942  TFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEI 1001

Query: 195  IQKGLVPNAFTYSFLLEAAY 214
             Q+GL PN  TY  L++A +
Sbjct: 1002 KQRGLWPNMTTYCILIDAIF 1021



 Score = 42.0 bits (97), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 1/152 (0%)

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           S+P  F   +I    R+G    A +    M   GF P  YT + L+  L  E  +     
Sbjct: 96  SNPSVF-DLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
            F  M      PDV  FN L+  LC   +   +  + + M E G +P+  TY  ++    
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 529 HQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            +   + + E++ ++  + + +++    +++ 
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVD 246


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 147/567 (25%), Positives = 252/567 (44%), Gaps = 79/567 (13%)

Query: 78  KLNDAFLQLE---RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           KL D  L +E    M  +   P+V     L+  LCK  +++ A K+   M    ++P+  
Sbjct: 78  KLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV 137

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++  CK G V  A+ L E+M+      + +T+NSL+ GLC    + ++   L+ +
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI 197

Query: 195 IQKGLVPNAFTYSFLLEAAYK-ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
              G VP+ FTYS + +   K + G  AA+ L  + I KG K +  + ++LL GLCKEG+
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGK 257

Query: 254 TEEAIRFFRDL-----------------------------------PSKGFEPNVVSYNI 278
            E+A    + L                                    S+G  PN +++N 
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNS 317

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++   C     ++A E + +M G   +P++ TYNILI             ++L+EM +  
Sbjct: 318 VIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENG 377

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
            +P+  SY  +I  LC +GK+      L  M  R   PN   YN L    C VGK++EA 
Sbjct: 378 EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
                +      +    Y  +I  LC+ GK  +A ++ + +T  G  PD  TY+SLI G 
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR---RTDLSLEVFQM------- 507
              G  ++ LE++  M++   KP ++ F+ L+ G  K     +  L  E+ QM       
Sbjct: 498 SNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRV 557

Query: 508 ------------------------MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                                   M++ G  P+  TY  L+ G   + +L  + +++ ++
Sbjct: 558 VYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM 617

Query: 544 QLRQVVSESAVERLVMQ-----YDFEG 565
           + + ++ E+    L++Q      DF G
Sbjct: 618 KAKGLIPEADTYSLLIQGHCDLKDFNG 644



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 226/467 (48%), Gaps = 9/467 (1%)

Query: 82  AFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           A L L R  + KG K D    + LL  LCK  K++KA +V++ +V  G++P    Y  +V
Sbjct: 225 AALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIV 284

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N  C+ G++  A+  +E+ME  G   N + +NS++   C +  ++++ +++ +++ KG+ 
Sbjct: 285 NGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIA 344

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ L++   +        ++L+++   G KPN++SY  L+  LCK+G+  EA   
Sbjct: 345 PSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMV 404

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            RD+  +G  PN   YN+L+   C  G+  EA     EM       TIVTYN LI  L  
Sbjct: 405 LRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCK 464

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK   A ++   +      P   +YN +I+   + G     ++  + M     KP   T
Sbjct: 465 MGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINT 524

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGN---KQNSSPQE-FYKYVITSLCRKGKTYQAFQLLY 436
           ++ L   C     +E   + ++L N   + N SP    Y  +I      G   +AF L  
Sbjct: 525 FHPLISGCS----KEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQK 580

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM   G  PD+ TY+SLI G   EG + E  ++   M+     P+ D ++ L+ G C  +
Sbjct: 581 EMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLK 640

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             + +   ++ M+E G +PN      L  G+     L+ +  +  E+
Sbjct: 641 DFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEM 687



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 231/482 (47%), Gaps = 13/482 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++     + MV  G +PD +     +    K   +K A+++ E M    ++P+   Y 
Sbjct: 46  KFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYN 105

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LCK+  +  A +L  +M       N VT+N+L+ G C  G ++ ++   +R+ ++
Sbjct: 106 VLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKE 165

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGRTEE 256
            + P+  T++ LL    K R +  A  +L++I   G  P+  +Y+++  GL K +     
Sbjct: 166 KVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGA 225

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+  +R+   KG + +  + +ILL  LC EG+ E+A E+L  +      P  V YN ++ 
Sbjct: 226 ALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G  D A+  +++M     RP+  ++N +I + C    +D   + + +M  +   P
Sbjct: 286 GYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345

Query: 377 NEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           +  TYN    G   LC   +  +    ++  G K N      Y  +I  LC+ GK  +A 
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVIS---YGSLINCLCKDGKILEAE 402

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            +L +M   G  P++  Y+ LI G C  G + EAL  F  M +      +  +N+L+ GL
Sbjct: 403 MVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGL 462

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH----QDELELSAEVLKELQLRQV 548
           CK  +   + E+F ++   G  P+  TY  L+ G ++    Q  LEL  E +K+L L+  
Sbjct: 463 CKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLEL-YETMKKLGLKPT 521

Query: 549 VS 550
           ++
Sbjct: 522 IN 523



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 217/471 (46%), Gaps = 3/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ DA      M  +   P+ V    L+   CKA ++  AI + E M    + P   
Sbjct: 113 KEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSII 172

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN-LNQSLQFLDR 193
           ++  L++ LCK   +  A  ++ +++  G+  +  TY+ +  GL    +    +L     
Sbjct: 173 TFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE 232

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            I KG+  + +T S LL    KE  V  A ++L  ++  G  P  V YN ++ G C+ G 
Sbjct: 233 AIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGD 292

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + AI     + S+G  PN +++N ++   C     ++A E + +M G   +P++ TYNI
Sbjct: 293 MDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNI 352

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI             ++L+EM +   +P+  SY  +I  LC +GK+      L  M  R 
Sbjct: 353 LIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRG 412

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             PN   YN L    C VGK++EA      +      +    Y  +I  LC+ GK  +A 
Sbjct: 413 VLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++ + +T  G  PD  TY+SLI G    G  ++ LE++  M++   KP ++ F+ L+ G 
Sbjct: 473 EMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG- 531

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           C      L   +F  M++    P+   Y  ++        ++ +  + KE+
Sbjct: 532 CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEM 582



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 172/381 (45%), Gaps = 8/381 (2%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            +  L     ++  G  P+   Y   + AA K   +  AM+L + +  +   PN+  YNV
Sbjct: 47  FDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNV 106

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+ GLCKE R  +A + F ++  +   PN V++N L+   C  G  + A  L   M    
Sbjct: 107 LIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEK 166

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC-SEGKVDLV 362
             P+I+T+N L+  L    + + A  +L+E+    F P   +Y+ I   L  S+      
Sbjct: 167 VEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAA 226

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
           +    +   +  K +  T + L   LC  GKV++A  +++SL        +  Y  ++  
Sbjct: 227 LDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            C+ G   +A   + +M   G  P+   ++S+I   C   +I++A E    M      P 
Sbjct: 287 YCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPS 346

Query: 482 VDNFNALLLG---LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           V+ +N L+ G   LC   R     ++ + M E G+ PN  +Y  L+  +    ++  +  
Sbjct: 347 VETYNILIDGYGRLCVFSRC---FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEM 403

Query: 539 VLKELQLRQVVSESAVERLVM 559
           VL+++  R V+  + +  +++
Sbjct: 404 VLRDMVGRGVLPNANIYNMLI 424



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 34/227 (14%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI-------- 129
           KL +A      + S GH PDV+   +L+     A   +K +++ E M   G+        
Sbjct: 467 KLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFH 526

Query: 130 --------------------------IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
                                      PD   Y  +++C  + G+V  A  L ++M D G
Sbjct: 527 PLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMG 586

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              +  TYNSL+ G    G L+++   +D +  KGL+P A TYS L++     +  + A 
Sbjct: 587 VRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAY 646

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
               +++  G  PN+   N L TGL K+GR +EA     ++ + G +
Sbjct: 647 VWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMD 693



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 6/149 (4%)

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
           + + ++ SL    K      L  EM   GF PD   Y   +      G ++ A+E+F  M
Sbjct: 33  YVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETM 92

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           +     P+V  +N L+ GLCK +R   + ++F  M  +  +PN  T+  L++G     E+
Sbjct: 93  KRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEV 152

Query: 534 ELSAEVLKELQLRQVVSESAVERLVMQYD 562
           +++      + LR+ + +  VE  ++ ++
Sbjct: 153 DVA------IGLRERMKKEKVEPSIITFN 175



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 7/151 (4%)

Query: 49  QVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL 108
           Q+ +SP   VY   N       +T H    +  AF   + MV  G +PD     +L+   
Sbjct: 549 QMNLSPDRVVY---NAMIHCYQETGH----VQKAFSLQKEMVDMGVRPDNKTYNSLILGH 601

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
            K  K+ +   +++ M + G+IP+A +Y+ L+   C   +   A     +M + G+  N 
Sbjct: 602 LKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNV 661

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
              N L  GL   G L ++      +I  G+
Sbjct: 662 CICNELSTGLRKDGRLQEAQSICSEMIANGM 692


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 221/439 (50%), Gaps = 20/439 (4%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           K   P + +   +L  L KAN     + +   M  +G+  +  + + L+NC  + G    
Sbjct: 6   KNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNAL 65

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           +  +   +   GY ++ +T+ +L++GLC+ G ++++L F D+++ +G   N  +Y  L+ 
Sbjct: 66  SFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLIN 125

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K     AA++ L  I  K  +P++V YN ++ GLCK+    +A   + ++ +K   P
Sbjct: 126 GLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICP 185

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +VV+YN L+  LC+  + ++A  LL +M   D +PT+ T++ILI +    GK   A  V 
Sbjct: 186 SVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVF 245

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG 391
             M+K   +P+  +YN ++        V++V            K  +  +N +     + 
Sbjct: 246 AVMMKEDVKPNIVTYNSLMD---GHHLVNVV------------KKAKSIFNTM-----IK 285

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            V EA  + + +  KQ       Y  +I  LC+ G+T  A + + EM   G  PD +TY+
Sbjct: 286 MVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYN 345

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SL+  LC    +++A+E+   +++   +P V  +N L+ GLCKS R   + +VF+ ++ K
Sbjct: 346 SLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVK 405

Query: 512 GQMPNETTYTILVEGIAHQ 530
           G   +  TY  +++G   +
Sbjct: 406 GYNTDVYTYNAMIKGFCKK 424



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 208/417 (49%), Gaps = 16/417 (3%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           +  V   ++  G   DA ++T L+  LC KG +  A+   +K+   G+  N V+Y +L+ 
Sbjct: 66  SFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLIN 125

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           GLC +G    +L+FL R+  K + P+   Y+ +++   K++ V+ A  L  +++AK   P
Sbjct: 126 GLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICP 185

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           ++V+YN L+ GLC   + ++AI     +  +   P V +++IL+ + C EG+ +EA  + 
Sbjct: 186 SVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVF 245

Query: 297 AEMDGGDRSPTIVTYNILIG-----SLAYHGKT---------DHALKVLDEMVKGRFRPS 342
           A M   D  P IVTYN L+      ++    K+         D A+ + +EM   +  P 
Sbjct: 246 AVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPD 305

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQ 401
              YN +I  LC  G+    +K + +M +R   P+  TYN L   LC    V +A  ++ 
Sbjct: 306 MVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLT 365

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            L ++        Y  +I  LC+ G+   A ++  ++   G+  D YTY+++I+G C +G
Sbjct: 366 KLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKG 425

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
           L +E L +   M++    PD  N   ++  L      D + + F+ MI +G+   E 
Sbjct: 426 LFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGK-FREMIVRGKCHREA 481



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 194/419 (46%), Gaps = 26/419 (6%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +  ++  L K  +    + L  +ME  G  +N VT + L+     LG    S   
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +++KG   +A T++ L++    +  +H A+   D ++A+G K N VSY  L+ GLCK
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+T  A+ F R +  K  +P+VV YN ++  LC +    +A  L  EM      P++VT
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  L    +   A+ +L +M+     P+  +++ +I   C EGK+         M 
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMM 249

Query: 371 HRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
               KPN  TYN L  + G   V  V++A +I  ++    +                   
Sbjct: 250 KEDVKPNIVTYNSL--MDGHHLVNVVKKAKSIFNTMIKMVD------------------- 288

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A  L  EM      PD   Y+SLI GLC  G    AL+    M      PD+  +N+
Sbjct: 289 --EAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNS 346

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           LL  LCK+   D ++E+   + ++G  P+  TY IL+ G+     L+ + +V ++L ++
Sbjct: 347 LLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVK 405



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 178/360 (49%), Gaps = 15/360 (4%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +++V++G K + V    L+  LCK  + + A++ +  +    + PD   Y  +++ LCK 
Sbjct: 106 DKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKD 165

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A  L  +M       + VTYN+L+ GLC++  L  ++  L ++I + + P  +T+
Sbjct: 166 KLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTF 225

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG-----LCKEGRT------- 254
           S L++A  KE  +  A  +   ++ +  KPN+V+YN L+ G     + K+ ++       
Sbjct: 226 SILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIK 285

Query: 255 --EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             +EA+  F ++  K   P++V YN L+  LC  GR   A + + EM    + P I TYN
Sbjct: 286 MVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYN 345

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            L+ +L  +   D A+++L ++     +PS  +YN +I  LC  G++    K  + +  +
Sbjct: 346 SLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVK 405

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
               +  TYN +    C  G   E  A++  + +   S   +  + +I SL  KG+  +A
Sbjct: 406 GYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKA 465



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 150/283 (53%), Gaps = 15/283 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA   L +M+ +   P V   + L+   CK  KMK+A  V  +M+   + P+  +Y 
Sbjct: 202 QLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYN 261

Query: 138 ------YLVNCLCKKGN--------VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
                 +LVN + K  +        V  AM L E+M       + V YNSL+ GLC  G 
Sbjct: 262 SLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGR 321

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
              +L+F+  +  +G  P+ FTY+ LL+A  K   V  A++LL  +  +G +P++ +YN+
Sbjct: 322 TPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNI 381

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+ GLCK GR ++A + F DL  KG+  +V +YN +++  C +G ++E   ++++M    
Sbjct: 382 LINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSG 441

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAAS 345
            SP      I+I SL   G+ D A K  + +V+G+  R + AS
Sbjct: 442 CSPDAKNCEIIIRSLFDKGENDKAGKFREMIVRGKCHREAPAS 484



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 147/314 (46%), Gaps = 14/314 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  +NDAF     MV+K   P VV    L+  LC   ++K AI ++  M+   I P   
Sbjct: 164 KDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVY 223

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL--------------CM 180
           +++ L++  CK+G +  A  +   M       N VTYNSL+ G                M
Sbjct: 224 TFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTM 283

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           +  +++++   + +  K + P+   Y+ L++   K      A+K + ++  +G  P++ +
Sbjct: 284 IKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFT 343

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YN LL  LCK    ++AI     L  +G +P+V +YNIL+  LC  GR ++A ++  ++ 
Sbjct: 344 YNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLL 403

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
               +  + TYN +I      G  D  L ++ +M      P A +   II  L  +G+ D
Sbjct: 404 VKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGEND 463

Query: 361 LVVKCLDQMFHRRC 374
              K  + +   +C
Sbjct: 464 KAGKFREMIVRGKC 477



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 171/366 (46%), Gaps = 15/366 (4%)

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L  K   P+ F +  +L +  K       + L   +   G   NLV+ ++L+    + G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              +   F ++  KG+  + +++  L++ LC++G   +A     ++         V+Y  
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+T  AL+ L  +     +P    YN II  LC +  V+       +M  +R
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P+  TYN L   LC + ++++A  ++  +  +  +     +  +I + C++GK  +A 
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-----------EEYDYK-- 479
            +   M K    P+  TY+SL+ G  +  ++++A  IF  M           EE  +K  
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQI 302

Query: 480 -PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PD+  +N+L+ GLCKS RT  +L+    M  +GQ P+  TY  L++ +     ++ + E
Sbjct: 303 YPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIE 362

Query: 539 VLKELQ 544
           +L +L+
Sbjct: 363 LLTKLK 368



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 1/209 (0%)

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI 399
           PS   +  I+  L       +VV    QM       N  T + L      +G+   +F++
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
             ++  K   S    +  +I  LC KG+ ++A     ++   GF  +  +Y +LI GLC 
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G    ALE    ++    +PDV  +N ++ GLCK +  + +  ++  M+ K   P+  T
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQV 548
           Y  L+ G+    +L+ +  +L ++ L  +
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILEDI 218



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 63/126 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +++ ++ A   L ++  +G +P V     L+  LCK+ ++K A KV E ++  G  
Sbjct: 349 DALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYN 408

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  ++   CKKG     + +V KM+D G   +      ++R L   G  +++ +F
Sbjct: 409 TDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGKF 468

Query: 191 LDRLIQ 196
            + +++
Sbjct: 469 REMIVR 474


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 220/459 (47%), Gaps = 2/459 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M S G +P++   T  +  L +A ++  A  + + M   G  PD  +YT L++ LC 
Sbjct: 258 LEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA 317

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +L  KM    +  + VTY +L+     +G+L    +F + +   G  P+  T
Sbjct: 318 AGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVT 377

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+EA  K   V  A  +LD +  KG  PNL +YN ++ GL K  R +EA+    ++ 
Sbjct: 378 YTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENME 437

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S G +P   SY + +      G   +A +    M      P+I   N  + +LA  G+  
Sbjct: 438 SLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRIS 497

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  + +++ K    P + +YN ++      G++D   + L +M  + C+P+    N L 
Sbjct: 498 EAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLI 557

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             L   G+V  A+ +   L N + +     Y  ++T L ++GK  +A +L   MT+ G  
Sbjct: 558 NTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCP 617

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P++ T++SL+  L     ++ AL++F  M   +  PDV  +N ++ GL +  R D +   
Sbjct: 618 PNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWF 677

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           F  M +K   P+  T   L+ G+     +E + +V+ E 
Sbjct: 678 FHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEF 715



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 234/504 (46%), Gaps = 57/504 (11%)

Query: 98  VVQATNLLY--DLC--------KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           V Q TN ++  D C        +  +++  + V ++M    I  + ++Y  +   L  KG
Sbjct: 121 VSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKG 180

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +G A   + KM + G+  N  +YN L+  L + G  N++L+   R+I +G+ P+  TYS
Sbjct: 181 GIGRAPFALRKMTEVGFILNAYSYNGLIH-LLLPGFCNEALKVYKRMISEGMKPSMKTYS 239

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+ A  +       M LL+++ + G +PN+ +Y + +  L +  R ++A   F+++  +
Sbjct: 240 ALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDE 299

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+V++Y +L+ +LC  G+ ++A EL  +M     SP  VTY  L+      G  +  
Sbjct: 300 GCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETV 359

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
            +  +EM    + P   +Y  +I  LC  G VD     LD M  +   PN  TYN   M+
Sbjct: 360 KRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYN--TMI 417

Query: 388 CGVGKVQ---EAFAII---QSLGNKQNS-SPQEFYKYV---------------------- 418
           CG+ K +   EA  ++   +SLG K  + S   F  Y                       
Sbjct: 418 CGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIM 477

Query: 419 ---------ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                    + +L   G+  +A  +  ++ K G +PDS TY+ L++     G I++A ++
Sbjct: 478 PSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQL 537

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              M     +PDV   N+L+  L K+ R D + ++F  +      P   TY IL+ G+  
Sbjct: 538 LSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGK 597

Query: 530 QDELELSAEVLKELQLRQVVSESA 553
           +       ++LK L+L   ++ES 
Sbjct: 598 E------GKILKALELFGSMTESG 615



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 214/452 (47%), Gaps = 4/452 (0%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGIIPDA 133
            R+ +++ AF    +M  K   PD V    L+  + +  +++ AIKV ME +  + +  ++
Sbjct: 667  REGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNS 725

Query: 134  SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
              +  L+ C+  +  +  A+   E +       +      L++ LC       +    D+
Sbjct: 726  QFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDK 785

Query: 194  LIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
              +  G+ P   +Y+ L++          A++L +D+ + G  PN  +YN+LL    K  
Sbjct: 786  FTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSK 845

Query: 253  RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
            R  +    + ++ S+G EPN +++NI++ +L       +A +L  E+  GD SPT  TY 
Sbjct: 846  RINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYG 905

Query: 313  ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
             LI  L   G+++ A+K+ +EM+     P++  YN +I      G++D   +   +M   
Sbjct: 906  PLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKE 965

Query: 373  RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              +P+  +Y  L   LC  G++ EA    + L           Y ++I  L +  +  +A
Sbjct: 966  GIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEA 1025

Query: 432  FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
              L  EM   G +PD YTY++LI  L + G ++ A++++  ++    +P V  +NAL+ G
Sbjct: 1026 LSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRG 1085

Query: 492  LCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
               S   D +  VF+ M+  G  PN  T+  L
Sbjct: 1086 HSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 227/511 (44%), Gaps = 43/511 (8%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            ++ K+  A      M   G  P+ +   +LL  L K + +  A+K+   M      PD  
Sbjct: 597  KEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVL 656

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +Y  ++  L ++G + YA     +M+ +  P + VT  +L+ G+   G +  +++ +   
Sbjct: 657  TYNTIIYGLIREGRIDYAFWFFHQMKKFLSP-DYVTLCTLIPGVVRHGRVEDAIKVVMEF 715

Query: 195  I-QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK--------------------- 232
            + Q  L  N+  +  L+E    E  +  A+   + ++                       
Sbjct: 716  VHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKK 775

Query: 233  ---------------GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                           G  P L SYN L+ GL     TE+A+  F D+ S G  PN  +YN
Sbjct: 776  ALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYN 835

Query: 278  ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            +LL +     R  +  +L +EM      P  +T+NI+I +L      + AL +  E++ G
Sbjct: 836  LLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSG 895

Query: 338  RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE-- 395
             F P+  +Y P+I  L   G+ +  +K  ++M    C PN   YN   ++ G GK  E  
Sbjct: 896  DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN--ILINGFGKSGEID 953

Query: 396  -AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
             A  + + +  +      + Y  ++  LC  G+  +A Q   E+   G  PD+ +Y+ +I
Sbjct: 954  FACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFII 1013

Query: 455  RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
             GL     ++EAL +F  M+     PD+  +NAL+L L  + + D+++++++ +   G  
Sbjct: 1014 NGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLE 1073

Query: 515  PNETTYTILVEGIAHQDELELSAEVLKELQL 545
            P+  TY  L+ G +     + +  V K++ +
Sbjct: 1074 PSVFTYNALIRGHSLSGNKDQAFSVFKKMMV 1104



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 229/509 (44%), Gaps = 39/509 (7%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            +++ A   L  M+SKG +PDV+   +L+  L KA ++  A K+   + +  + P   +Y 
Sbjct: 530  QIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYN 589

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+  L K+G +  A++L   M + G P NT+T+NSL+  L     ++ +L+   R+   
Sbjct: 590  ILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMM 649

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               P+  TY+ ++    +E  +  A      +  K   P+ V+   L+ G+ + GR E+A
Sbjct: 650  NCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDA 708

Query: 258  IRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEA------------------------ 292
            I+   +   +   + N   +  L+  +  E   EEA                        
Sbjct: 709  IKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIK 768

Query: 293  -----NELLAEMDGGDR-------SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
                  + L   +  D+        PT+ +YN L+  L     T+ AL++ ++M      
Sbjct: 769  VLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTH 828

Query: 341  PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAI 399
            P+  +YN ++       +++ +     +M  R C+PN  T+N + + L     + +A  +
Sbjct: 829  PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDL 888

Query: 400  IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
               L +   S     Y  +I  L + G++ QA ++  EM  YG  P+S  Y+ LI G   
Sbjct: 889  YYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGK 948

Query: 460  EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
             G I+ A E+F  M +   +PD+ ++  L+  LC + R D +++ F+ +   G  P+  +
Sbjct: 949  SGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVS 1008

Query: 520  YTILVEGIAHQDELELSAEVLKELQLRQV 548
            Y  ++ G+     L+ +  +  E++ R +
Sbjct: 1009 YNFIINGLGKSRRLDEALSLFSEMKNRGI 1037



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 162/353 (45%), Gaps = 1/353 (0%)

Query: 93   GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
            G  P +     L+  L  +N  +KA+++ E M S+G  P+  +Y  L++   K   +   
Sbjct: 791  GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 153  MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
              L  +M   G   N +T+N ++  L    NLN++L     L+     P   TY  L++ 
Sbjct: 851  YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910

Query: 213  AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
              K      AMK+ ++++  G  PN V YN+L+ G  K G  + A   F+ +  +G  P+
Sbjct: 911  LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970

Query: 273  VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            + SY IL+  LC+ GR +EA +   E+      P  V+YN +I  L    + D AL +  
Sbjct: 971  LKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030

Query: 333  EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-G 391
            EM      P   +YN +I  L   GKVD+ VK  +++     +P+  TYN L     + G
Sbjct: 1031 EMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSG 1090

Query: 392  KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
               +AF++ + +     S   E +  +     R G  +  F  ++    + FT
Sbjct: 1091 NKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFGAVFIGLFFIFT 1143



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 143/276 (51%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  ++N  +     M S+G +P+ +    ++  L K+N + KA+ +   ++S    
Sbjct: 839  DAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFS 898

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L++ L K G    AM++ E+M DYG   N+V YN L+ G    G ++ + + 
Sbjct: 899  PTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACEL 958

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +++++G+ P+  +Y+ L+E       +  A++  +++   G  P+ VSYN ++ GL K
Sbjct: 959  FKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGK 1018

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              R +EA+  F ++ ++G  P++ +YN L+  L + G+ + A ++  E+      P++ T
Sbjct: 1019 SRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFT 1078

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            YN LI   +  G  D A  V  +M+     P+  ++
Sbjct: 1079 YNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 179/394 (45%), Gaps = 35/394 (8%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  TY ++ + L + G + ++   L ++ + G + NA++Y+ L+         + A+K+ 
Sbjct: 165 NLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGF-CNEALKVY 223

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             +I++G KP++ +Y+ L+  L + G T + +    ++ S G  PN+ +Y I +R+L   
Sbjct: 224 KRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRA 283

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            R ++A  +  EMD     P ++TY +LI +L   GK D A ++  +M      P   +Y
Sbjct: 284 RRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTY 343

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
             ++ +    G ++ V +  ++M      P+  TY  L                      
Sbjct: 344 ITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTIL---------------------- 381

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                       I +LC+ G   +AF +L  MT  G  P+ +TY+++I GL     ++EA
Sbjct: 382 ------------IEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           LE+   ME    KP   ++   +    KS     +++ F+ M ++G MP+       +  
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +A    +  + ++  +L    +  +S    ++M+
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMK 523


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 236/522 (45%), Gaps = 60/522 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    + M+  G K ++V    L+   CK  ++ +A +V   MV   + PD  SY 
Sbjct: 347 RMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYN 406

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C++G V  A  L E+M   G     VTYN++++GL  +G+ + +L     ++++
Sbjct: 407 TLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVER 466

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  +   +L+  +K      AM L  +I+ +G   + V++N +++GLCK G+  EA
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA------------------------- 292
              F  +   G  P+ ++Y  L    C  G  +EA                         
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDG 586

Query: 293 ----------NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
                      +LL EM     SP +VTY  LI       K D A  +  EM++  F P+
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPN 646

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMF-------HRRCKPNEGTYNGLAMLCGVGKVQE 395
               + I++ L  + ++      LD+M        H +C  ++   N L +        E
Sbjct: 647 VVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKC-SDKLVKNDLTL--------E 697

Query: 396 AFAIIQSLGNKQ--NS-SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           A  I  SL      NS S    Y   I  LC+ GK  +A  +L  +   GF PD++TY +
Sbjct: 698 AQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCT 757

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI    + G ++EA ++   M E    P++  +NAL+ GLCK    D +  +F  + +KG
Sbjct: 758 LIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKG 817

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +PN  TY IL+       +L+      K  +LR+ ++E  +
Sbjct: 818 LVPNAVTYNILIGCYCRIGDLD------KASRLREKMTEEGI 853



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 211/459 (45%), Gaps = 10/459 (2%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A    + M   G  P +   + LL  L +  + + A+ V + +V +GI+PD    + +VN
Sbjct: 175 ALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVN 234

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C+ G V  AM+++EKM   G   N VTYN LV G    G+     + L  + ++G+  
Sbjct: 235 AHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSR 294

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLL-----DDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           N  T + L+    K+  +  A KLL     D+++    +     Y VL+ G C+ GR E+
Sbjct: 295 NVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDER----VYGVLVDGYCQMGRMED 350

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+R   ++   G + N+V  N L++  C  G+  EA  +   M   +  P   +YN L+ 
Sbjct: 351 AVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLD 410

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                GK   A  + +EM+     P+  +YN +I  L   G  D  +     M  R   P
Sbjct: 411 GYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTP 470

Query: 377 NE-GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           NE      L     +G    A  + + +  +  +     +  +I+ LC+ GK  +A  + 
Sbjct: 471 NEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVF 530

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M + G +PD  TY +L  G C  G ++EA +I  VME       ++ +N+L+ GL K 
Sbjct: 531 DRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKI 590

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           R+ +   ++   M  +G  PN  TY  L+ G   + +L+
Sbjct: 591 RKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLD 629



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 204/442 (46%), Gaps = 7/442 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ K++ AF+  E M+  G  P VV    ++  L        A+ +  +MV  G+ P+  
Sbjct: 414 REGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEI 473

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S   +++C  K G+   AM L +++   G+  +TV +N+++ GLC +G L ++    DR+
Sbjct: 474 SCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRM 533

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL P+  TY  L +   K   V  A ++   +  +    ++  YN L+ GL K  + 
Sbjct: 534 KELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKL 593

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +      ++ ++G  PNVV+Y  L+   C E + ++A  L  EM     +P +V  + +
Sbjct: 594 NDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKI 653

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG---KVDLVVKCLDQMFH 371
           + SL    +   A  +LD+M+        A +N    +L       +   +   LD+   
Sbjct: 654 VSSLYRDDRISEATVILDKMLDFDI---LAVHNKCSDKLVKNDLTLEAQKIADSLDKSDI 710

Query: 372 RRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
                N   YN  +  LC  GK+ EA +++  L ++        Y  +I +    G   +
Sbjct: 711 CNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDE 770

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF+L  EM + G  P+   Y++LI GLC  G I+ A  +F  + +    P+   +N L+ 
Sbjct: 771 AFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIG 830

Query: 491 GLCKSRRTDLSLEVFQMMIEKG 512
             C+    D +  + + M E+G
Sbjct: 831 CYCRIGDLDKASRLREKMTEEG 852



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 220/506 (43%), Gaps = 43/506 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLVNCLC 144
           L  M  +G   +VV  T L+   CK  KM +A K++ E+     ++ D   Y  LV+  C
Sbjct: 284 LRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYC 343

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           + G +  A+++ ++M   G   N V  N+L++G C LG + ++ +    ++   L P+ +
Sbjct: 344 QMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCY 403

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           +Y+ LL+   +E  V  A  L ++++  G  P +V+YN ++ GL   G  ++A+  +  +
Sbjct: 404 SYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLM 463

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +G  PN +S   +L      G  + A  L  E+ G   + + V +N +I  L   GK 
Sbjct: 464 VERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKL 523

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A  V D M +    P   +Y  +    C  G V    +    M  +    +   YN L
Sbjct: 524 MEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSL 583

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              L  + K+ +   ++  +  +  S     Y  +I+  C + K  +AF L +EM + GF
Sbjct: 584 IDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGF 643

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY------------------------- 478
           TP+    S ++  L  +  I EA  I   M ++D                          
Sbjct: 644 TPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIAD 703

Query: 479 ---KPDVDN-------FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
              K D+ N       +N  + GLCKS + D +  V  +++ +G +P+  TY  L+   +
Sbjct: 704 SLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACS 763

Query: 529 HQDELELSAEVLKELQLRQVVSESAV 554
                 +S  V +  +LR  + E  +
Sbjct: 764 ------VSGNVDEAFKLRDEMLEKGL 783



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 196/421 (46%), Gaps = 7/421 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L+    ++G   +A+ + ++M   G      + + L+  L   G    ++   D+++
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
             G+VP+ +  S ++ A  +   V  AM++L+ ++ +G +PN+V+YN L+ G    G  E
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV---TYN 312
              R  R +  +G   NVV+  +L+R  C +G+ +EA +LL E++  +    +V    Y 
Sbjct: 279 GVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVE--EDELLVVDERVYG 336

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           +L+      G+ + A+++ DEM++   + +    N +I   C  G+V    +    M   
Sbjct: 337 VLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDW 396

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
             KP+  +YN L    C  GKV +AF + + +     +     Y  VI  L   G    A
Sbjct: 397 NLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDA 456

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             L + M + G TP+  +  +++      G  + A+ ++  +    +      FN ++ G
Sbjct: 457 LHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISG 516

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           LCK  +   +  VF  M E G  P+E TY  L +G      ++ + ++ K +  RQ +S 
Sbjct: 517 LCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQI-KGVMERQAMSA 575

Query: 552 S 552
           S
Sbjct: 576 S 576



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 50/91 (54%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++AF   + M+ KG  P++     L+  LCK   + +A ++   +   G++P+A +Y  
Sbjct: 768 VDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNI 827

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           L+ C C+ G++  A +L EKM + G  T  +
Sbjct: 828 LIGCYCRIGDLDKASRLREKMTEEGISTRII 858


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 209/440 (47%), Gaps = 2/440 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM   G +P V     LL    K N ++ A  +++  V +GI     +Y  ++  LC+ G
Sbjct: 387 RMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELG 445

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A  L +KM   G   + V+YN ++ G C  G ++ + + ++ +I+ GL PNA TY+
Sbjct: 446 KVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYT 505

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+E ++K+     A  + D ++A G  P   ++N ++ GLCK GR  EA         +
Sbjct: 506 ILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQ 565

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
            F P  ++YN ++     EG  + A  +  EM   + SP ++TY  LI       K D A
Sbjct: 566 SFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLA 625

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAM 386
           LK+ D+M +         Y  +IA  C    ++   K   ++      PN   YN  ++ 
Sbjct: 626 LKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISA 685

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
              +  ++ A  + + + N +     + Y  +I  L ++GK   A  L  EM   G  PD
Sbjct: 686 YRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPD 745

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            + Y+ LI GLC  G +E A +I   M+  +  P V  +N L+ G  K      +  +  
Sbjct: 746 IFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHD 805

Query: 507 MMIEKGQMPNETTYTILVEG 526
            M++KG +P++TTY ILV G
Sbjct: 806 EMLDKGLVPDDTTYDILVNG 825



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 225/467 (48%), Gaps = 8/467 (1%)

Query: 83  FLQLER----MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           F++ ER       +G K D    + ++  +C+ + +  A K++E     G +P   +Y  
Sbjct: 238 FVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAA 297

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++    + GN G A++L ++M D   P N     SL++G C+ G++N +L+  D +++ G
Sbjct: 298 VIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG 357

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + PN   +S L+E   K   V  A +L   +   G +P +   N LL G  K+   E A 
Sbjct: 358 VTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAY 417

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                    G   +VV+YNI+L  LC  G+  EA  L  +M G   +P++V+YN +I   
Sbjct: 418 LLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGH 476

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G  D A +V++ +++   +P+A +Y  ++     +G  +      DQM      P +
Sbjct: 477 CKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTD 536

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
            T+N +   LC VG+V EA   + +   KQ+  P    Y  +I    ++G    A  +  
Sbjct: 537 YTFNSIINGLCKVGRVSEARDKLNTF-IKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYR 595

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM +   +P+  TY+SLI G C    ++ AL++   M+    + D+  +  L+ G CK +
Sbjct: 596 EMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQ 655

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             + + + F  ++E G  PN   Y I++    + + +E +  + KE+
Sbjct: 656 DMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEM 702



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 218/474 (45%), Gaps = 10/474 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R + + DA    + M  +    D      L+    K  K  +A +        G+  DA+
Sbjct: 199 RRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAA 258

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY+ ++  +C+  ++  A +LVE  E+ G+  +  TY +++     LGN  ++L+  D +
Sbjct: 259 SYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEM 318

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   +  N    + L++       V++A++L D+++  G  PN+  ++VL+    K G  
Sbjct: 319 VDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNV 378

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS--PTIVTYN 312
           E+A   +  +   G +P V   N LL+    +   E A  LL   DG   +   ++VTYN
Sbjct: 379 EKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLL---DGAVENGIASVVTYN 435

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I++  L   GK + A  + D+M+     PS  SYN +I   C +G +D   + ++ +   
Sbjct: 436 IVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIES 495

Query: 373 RCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
             KPN  TY    ++ G    G  + AF +   +           +  +I  LC+ G+  
Sbjct: 496 GLKPNAITYT--ILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVS 553

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A   L    K  F P S TY+ +I G   EG I+ A  ++  M   +  P+V  + +L+
Sbjct: 554 EARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLI 613

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G CKS + DL+L++   M  KG   + T Y  L+ G     ++E + +   +L
Sbjct: 614 NGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKL 667



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 185/380 (48%), Gaps = 1/380 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+N+A    ++M+ KG  P +V   +++   CK   M  A +VM  ++ SG+ P+A +YT
Sbjct: 446 KVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYT 505

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+    KKG+  +A  + ++M   G      T+NS++ GLC +G ++++   L+  I++
Sbjct: 506 ILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQ 565

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             +P + TY+ +++   KE  + +A  +  ++      PN+++Y  L+ G CK  + + A
Sbjct: 566 SFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLA 625

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++   D+  KG E ++  Y  L+   C     E A +  +++     +P  + YNI+I +
Sbjct: 626 LKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISA 685

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                  + AL +  EM+  +       Y  +I  L  EGK+   +    +M  R   P+
Sbjct: 686 YRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPD 745

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              YN L   LC  G+++ A  I++ +     +     Y  +I    ++G   +AF+L  
Sbjct: 746 IFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHD 805

Query: 437 EMTKYGFTPDSYTYSSLIRG 456
           EM   G  PD  TY  L+ G
Sbjct: 806 EMLDKGLVPDDTTYDILVNG 825



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 180/400 (45%), Gaps = 9/400 (2%)

Query: 155 LVEKMEDYGYP-TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           LVE  E YG+  +++  +N L+        + ++++    +++ G+VP     + LL A 
Sbjct: 138 LVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAM 197

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            +   V  A +L D++  +    +  +  VL+    K G+  EA R+F     +G + + 
Sbjct: 198 IRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDA 257

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
            SY+I+++++C     + A++L+   +     P+  TY  +IG+    G    AL++ DE
Sbjct: 258 ASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDE 317

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---- 389
           MV  R   + A    +I   C  G V+  ++  D++      PN   ++ L   C     
Sbjct: 318 MVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGN 377

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           V K  E +  ++ +G +    P  F    +    RK    +   LL +           T
Sbjct: 378 VEKANELYTRMKCMGLQ----PTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVT 433

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y+ ++  LC  G + EA  ++  M      P + ++N ++LG CK    D + EV   +I
Sbjct: 434 YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGII 493

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           E G  PN  TYTIL+EG   + + E +  +  ++    +V
Sbjct: 494 ESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIV 533



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/489 (19%), Positives = 185/489 (37%), Gaps = 78/489 (15%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           + D+  + YL+    +   +  A++    M + G        N L+  +     +  + +
Sbjct: 149 LSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHR 208

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
             D + ++ +  + +T   L+ A  K      A +       +G K +  SY++++  +C
Sbjct: 209 LFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVC 268

Query: 250 K-----------EGRTE------------------------EAIRFFRDLPSKGFEPNVV 274
           +           EG  E                        EA+R   ++       NV 
Sbjct: 269 RGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVA 328

Query: 275 SYNILLRSLCMEG----------------------------RW-------EEANELLAEM 299
               L++  C+ G                             W       E+ANEL   M
Sbjct: 329 VATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRM 388

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 PT+   N L+         ++A  +LD  V+     S  +YN ++  LC  GKV
Sbjct: 389 KCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKV 447

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSL---GNKQNSSPQEFY 415
           +      D+M  +   P+  +YN + +  C  G + +A  ++  +   G K N+     Y
Sbjct: 448 NEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAIT---Y 504

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             ++    +KG    AF +  +M   G  P  YT++S+I GLC  G + EA +      +
Sbjct: 505 TILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIK 564

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
             + P    +N ++ G  K    D +  V++ M      PN  TYT L+ G    ++++L
Sbjct: 565 QSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDL 624

Query: 536 SAEVLKELQ 544
           + ++  +++
Sbjct: 625 ALKMHDDMK 633



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 100/206 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + +K++ A    + M  KG + D+     L+   CK   M+ A K    ++  G+ P+  
Sbjct: 618 KSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTI 677

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  +++      N+  A+ L ++M +   P +   Y SL+ GL   G L+ +L     +
Sbjct: 678 VYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEM 737

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +G+VP+ F Y+ L+        +  A K+L ++      P ++ YN L+ G  KEG  
Sbjct: 738 LCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNL 797

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL 280
           +EA R   ++  KG  P+  +Y+IL+
Sbjct: 798 QEAFRLHDEMLDKGLVPDDTTYDILV 823



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 129/329 (39%), Gaps = 30/329 (9%)

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWE-EANELLAEMD 300
           VL T L  +     A+RFF+ + +K GF        +LL+ L        +A  LL +  
Sbjct: 64  VLDTLLLHKADPRSALRFFKQVETKGGFAKTADVLCLLLQILASNPETHGDAKHLLNKYV 123

Query: 301 GGDRSPTIV---------------------TYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
            GD +P                         +N L+ S     K   A++    M++   
Sbjct: 124 FGDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGV 183

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEA-- 396
            P     N ++  +     V+   +  D+M  RR   +  T   L   C   GK  EA  
Sbjct: 184 VPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAER 243

Query: 397 -FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
            F      G K +++    Y  VI ++CR      A +L+    + G+ P   TY+++I 
Sbjct: 244 YFGQAAGRGLKLDAAS---YSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIG 300

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
                G   EAL +   M +     +V    +L+ G C     + +L +F  ++E G  P
Sbjct: 301 ACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTP 360

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQ 544
           N   +++L+E  +    +E + E+   ++
Sbjct: 361 NVAIFSVLIEWCSKIGNVEKANELYTRMK 389



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ KL+ A      M+ +G  PD+     L+  LC   +++ A K+++ M  + I 
Sbjct: 719 DGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNIT 778

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
           P    Y  L+    K+GN+  A +L ++M D G   +  TY+ LV G
Sbjct: 779 PTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 217/434 (50%), Gaps = 1/434 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++N AF    +++  G++PD++  T L+  LC   ++K+++   + +VS GI  D  SY 
Sbjct: 99  QINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYG 158

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N LCK G  G A++L+ K+E      + V YN+++ GLC    +  +      + +K
Sbjct: 159 TLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEK 218

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + PN  TY+ L+        +  A  LL++++ K   PN+ ++N L+ GLCKEG+  EA
Sbjct: 219 RVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREA 278

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +  +G  P+V +YN L+    +     +A  +   M     +  + +Y+++I  
Sbjct: 279 KSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISG 338

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L+     D A+ + + M      P   +Y+ +I  LC  G+++  +K +D+M  R   PN
Sbjct: 339 LSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPN 398

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC   +V +A A+++ + ++   +    Y  ++  LC+ G+   A ++  
Sbjct: 399 VITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQ 458

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           ++   G   D  TYS +I GLC E L +EAL +   ME+    PD   +  ++    +  
Sbjct: 459 DLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKD 518

Query: 497 RTDLSLEVFQMMIE 510
             D + ++ + MI+
Sbjct: 519 MNDKAEKLLREMID 532



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 240/497 (48%), Gaps = 11/497 (2%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           H    LNDA     RM+     P +++   +L  L K       I + + M   GI  + 
Sbjct: 25  HSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNY 84

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +   L+N  C    +  A  +  K+   GY  + +TY +L+RGLC+ G + +SL F DR
Sbjct: 85  ITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDR 144

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           L+ +G+  +  +Y  L+    K      A++LL  I  +  +P++V YN ++ GLCK+  
Sbjct: 145 LVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKL 204

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +A   + ++  K   PNVV+Y  L+   C+ G+ ++A  LL EM   + +P + T+N 
Sbjct: 205 VRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNT 264

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR--LCSE-GKVDLVVKCLDQMF 370
           L+  L   GK   A  ++  M+K    P   +YN ++    L  E GK   V   + QM 
Sbjct: 265 LVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM- 323

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
              C  +  +     M+ G+ K++   EA  + + + N+        Y  +I  LC+ G+
Sbjct: 324 GVTCDVHSYS----VMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 379

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A + + EM   G  P+  TY+SLI  LC    +++A+ +   +++   + ++  +N 
Sbjct: 380 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 439

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+ GLCK  R   + +VFQ ++ KG   +  TY+I++ G+  +   + +  +L +++ + 
Sbjct: 440 LVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 499

Query: 548 VVSESAVERLVMQYDFE 564
            V ++     ++   FE
Sbjct: 500 CVPDAIAYETIINAFFE 516



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 56/108 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + H+++ A   L+++  +G + ++     L+  LCK  ++  A KV + ++  G  
Sbjct: 407 DALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHN 466

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
            D  +Y+ ++N LCK+     A+ L+ KMED G   + + Y +++   
Sbjct: 467 VDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF 514



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 4/121 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L DA    + ++ KGH  DVV  + ++  LCK +   +A+ ++  M   G +
Sbjct: 442 DGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCV 501

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMED-YGYPTNTVT---YNSLVRGLCMLGNLNQ 186
           PDA +Y  ++N   +K     A +L+ +M D   Y  N  T   Y+  +    +L + N 
Sbjct: 502 PDAIAYETIINAFFEKDMNDKAEKLLREMIDCVDYKDNGDTCDQYDEFICKRSILASWNS 561

Query: 187 S 187
           S
Sbjct: 562 S 562


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 221/481 (45%), Gaps = 2/481 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  R  ++++A   L++M     +  V    +L+   CK      A    + M+  G+ 
Sbjct: 235 DSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLT 294

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +YT L++  C +G    A ++  +M   G   NT T+ +++ GLC    + ++++ 
Sbjct: 295 PTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRL 354

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + ++ ++P+  TY+ ++E   +   +  A  LLD+++ KG  P+  +Y  L++GLC 
Sbjct: 355 FGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCS 414

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  EA  F  DL     + N + Y+ L+   C EGR+++A      M     +  +V 
Sbjct: 415 VGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVC 474

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ILI   A    T     +L EM     RP A  Y  +I R    G +       D M 
Sbjct: 475 YAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMV 534

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C PN  TY  L   LC  G + +A  + +       +     Y   +  L R G   
Sbjct: 535 DEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNME 594

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A QL + M K GF   + +Y+ LIRG C  G IEEA ++   M + D  PD   ++ ++
Sbjct: 595 KAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTII 653

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
              CK      +++++  M++KG  P+   Y+ LV G     ELE + E+  E+  R + 
Sbjct: 654 YEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMR 713

Query: 550 S 550
           S
Sbjct: 714 S 714



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 222/492 (45%), Gaps = 27/492 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + ND  L  + +VS   +PD+   + ++  LC+     KA +++  M  +       
Sbjct: 108 RFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIV 167

Query: 135 SYTYLVNCLCKKGNVGYAMQ--------------------------LVEKMEDYGYPTNT 168
            Y  L++ LCK   +  A++                          L ++M + G   N 
Sbjct: 168 VYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANH 227

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           +TY+ L+   C  G ++ ++ FLD++ +  +    + Y+ L+    K     AA    D+
Sbjct: 228 ITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDE 287

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +I KG  P +V+Y  L++G C EG   +A + + ++ +KG  PN  ++  ++  LC    
Sbjct: 288 MIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANM 347

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             EA  L  EM      P+ VTYN++I      G    A  +LDEMV   F P   +Y P
Sbjct: 348 MAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRP 407

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I+ LCS G+V    + +D +     K N   Y+ L    C  G+ ++A +  + +  + 
Sbjct: 408 LISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERG 467

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            +     Y  +I    R+  T   F LL EM  +G  PD+  Y+++I      G ++EA 
Sbjct: 468 VAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAF 527

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            ++ +M +    P+V  + AL+ GLCK+   D +  + +  +     PN  TY   ++ +
Sbjct: 528 GLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHL 587

Query: 528 AHQDELELSAEV 539
                +E + ++
Sbjct: 588 TRGGNMEKAVQL 599



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 211/486 (43%), Gaps = 28/486 (5%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+V   + LL  L +  +    + + + +VS+ + PD   Y+ +V  LC+  +   A ++
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ------------------- 196
           +  ME      + V YN L+ GLC    + ++L+  + L+Q                   
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAEL 213

Query: 197 -------KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
                  KGL  N  TYS L+++  +   +  A+  LD +     +  +  YN L+ G C
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G    A  +F ++  KG  P VV+Y  L+   C EG W +A ++  EM     SP   
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+  +I  L        A+++  EM + +  PS  +YN +I   C  G +      LD+M
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393

Query: 370 FHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +   P+  TY  L + LC VG+V EA   +  L    +      Y  ++   C++G+ 
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A      M + G   D   Y+ LI G   E        +   M  +  +PD   +  +
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNM 513

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +    K+     +  ++ +M+++G +PN  TYT L+ G+     ++  AE+L +  L   
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMD-KAELLSKETLVSD 572

Query: 549 VSESAV 554
           V+ + +
Sbjct: 573 VTPNHI 578



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 210/467 (44%), Gaps = 26/467 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            ND F      +S+  KP  V    ++  L  +  MK             ++P+  + + 
Sbjct: 58  FNDPF------ISRNLKPSHVDKVLMMLSLNDSRLMKDC----------NLMPEVRTLSA 101

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+N L +       + L + +       +   Y+++VR LC L + N++ + +  +    
Sbjct: 102 LLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQ 161

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              +   Y+ L+    K R +  A+++ + ++ KG + N+V+Y          G+  EA 
Sbjct: 162 CKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YGKFNEAE 212

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+++  KG   N ++Y+IL+ S C  G  + A   L +M       T+  YN LI   
Sbjct: 213 LLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGY 272

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A    DEM+     P+  +Y  +I+  C+EG+     K  ++M  +   PN 
Sbjct: 273 CKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNT 332

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            T+   ++ LC    + EA  +   +  ++    +  Y  +I   CR G   +AF LL E
Sbjct: 333 YTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDE 392

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   GF PD+YTY  LI GLC  G + EA E    + +  +K +   ++AL+ G CK  R
Sbjct: 393 MVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGR 452

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              ++   ++M+E+G   +   Y IL++G A + +      +LKE+ 
Sbjct: 453 FKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMH 499



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 8/224 (3%)

Query: 52  ISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA 111
           + P   +YT       N  D   +   L +AF   + MV +G  P+VV  T L+  LCKA
Sbjct: 503 LRPDAVIYT-------NMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKA 555

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
             M KA  + +  + S + P+  +Y   ++ L + GN+  A+QL   M   G+   TV+Y
Sbjct: 556 GLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSY 614

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+RG C LG + ++ + L  +    ++P+  TYS ++    K   +  A+KL   ++ 
Sbjct: 615 NILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLD 674

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           KG KP+ ++Y+ L+ G C  G  E+A     ++  +G   N V+
Sbjct: 675 KGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/325 (22%), Positives = 134/325 (41%), Gaps = 43/325 (13%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P + + + LL GL +  R  + +  F D+ S   +P++  Y+ ++RSLC    + +A E+
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           +  M+      +IV YN+LI  L    +   AL++ + +++     +  +Y         
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY--------- 204

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
                                              GK  EA  + + +G K   +    Y
Sbjct: 205 ----------------------------------YGKFNEAELLFKEMGEKGLCANHITY 230

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I S CR+G+   A   L +MTK       Y Y+SLI G C  G    A   F  M +
Sbjct: 231 SILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMID 290

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P V  + +L+ G C       + +V+  M  KG  PN  T+T ++ G+   + +  
Sbjct: 291 KGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAE 350

Query: 536 SAEVLKELQLRQVVSESAVERLVMQ 560
           +  +  E++ R+++       ++++
Sbjct: 351 AIRLFGEMKERKIMPSEVTYNVMIE 375


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 236/503 (46%), Gaps = 39/503 (7%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A++   RM + G    ++    ++  LCK    + A   M  ++  G + D+   T L+ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238

Query: 142 CLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             C+  N+  A+++ + M ++     N+V+Y+ L+ GLC +G L ++    D++ +KG  
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  TY+ L++A      +  A  L D++I +G KPN+ +Y VL+ GLC++G+ EEA   
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--------------------- 299
            R +      P+V++YN L+   C +GR   A ELL  M                     
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 300 ---------------DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
                          D G  SP IV+YN+LI  L   G  + A K+L  M      P   
Sbjct: 419 VGKPYKAVHLLKRMLDNG-LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL 403
           ++  II   C +GK D+    L  M  +    +E T   L   +C VGK ++A  I+++L
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
              +  +       ++  L +  K  +   +L ++ K G  P   TY++L+ GL   G I
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
             +  I  +M+     P+V  +  ++ GLC+  R + + ++   M + G  PN  TYT++
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657

Query: 524 VEGIAHQDELELSAEVLKELQLR 546
           V+G  +  +L+ + E ++ +  R
Sbjct: 658 VKGYVNNGKLDRALETVRAMVER 680



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 232/472 (49%), Gaps = 11/472 (2%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+ V  + L++ LC+  ++++A  + + M   G  P   +YT L+  LC +G +  A  L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            ++M   G   N  TY  L+ GLC  G + ++     ++++  + P+  TY+ L+    K
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +  V  A +LL  +  +  KPN+ ++N L+ GLC+ G+  +A+   + +   G  P++VS
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN+L+  LC EG    A +LL+ M+  D  P  +T+  +I +    GK D A   L  M+
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
           +        +   +I  +C  GK    +  L+ +   R      + N  L ML    KV+
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563

Query: 395 EAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           E  A++  + NK    P    Y  ++  L R G    +F++L  M   G  P+ Y Y+ +
Sbjct: 564 EELAMLGKI-NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I GLC  G +EEA ++   M++    P+   +  ++ G   + + D +LE  + M+E+G 
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682

Query: 514 MPNETTYTILVEG-IAHQDELELSAE-VLKELQLRQVVSE------SAVERL 557
             N+  Y+ L++G +  Q  ++ S E  + ++ LR+   E      S VE+L
Sbjct: 683 ELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL 734



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 22/408 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+RM+  G  PD+V    L+  LC+   M  A K++  M    I PD  ++T ++N  CK
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G    A   +  M   G   + VT  +L+ G+C +G    +L  L+ L++  ++    +
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            + +L+   K   V   + +L  I   G  P++V+Y  L+ GL + G    + R    + 
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PNV  Y I++  LC  GR EEA +LL+ M     SP  VTY +++     +GK D
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIAR--LCSEGKVDLVVKCLDQMFHRRCKP---NE-- 378
            AL+ +  MV+  +  +   Y+ ++    L  +G  +     +  +  R   P   NE  
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELI 728

Query: 379 -------GTYNGLAM-----LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
                  G  +GL +     LC  G+  E+  ++Q++  ++    ++    ++ S C K 
Sbjct: 729 SVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNV-LERGVFLEKAMDIIMESYCSKK 787

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           K  +  +L+  + K GF P   ++  +I+GL  EG  E A E+  VME
Sbjct: 788 KHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL--VME 833



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/511 (22%), Positives = 220/511 (43%), Gaps = 38/511 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   RD K+ +A     +MV     P V+    L+   CK  ++  A +++ +M      
Sbjct: 344 DGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  L+  LC+ G    A+ L+++M D G   + V+YN L+ GLC  G++N + + 
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +    + P+  T++ ++ A  K+     A   L  ++ KG   + V+   L+ G+CK
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+T +A+     L          S N++L  L    + +E   +L +++     P++VT
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT 583

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+  L   G    + ++L+ M      P+   Y  II  LC  G+V+   K L  M 
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643

Query: 371 HRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITS--LCRK 425
                PN  TY    M+ G    GK+  A   ++++  +        Y  ++    L +K
Sbjct: 644 DSGVSPNHVTYT--VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYT--------YSSLIRGLCM--------EG-------L 462
           G        + ++      P+               I GLC+        EG       L
Sbjct: 702 GIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDL 761

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++  LE  V +E+          + ++   C  ++    +E+  ++++ G +P+  ++ +
Sbjct: 762 VQNVLERGVFLEK--------AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCL 813

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +++G+  + + E + E++ EL     V E +
Sbjct: 814 VIQGLKKEGDAERARELVMELLTSNGVVEKS 844


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 217/455 (47%), Gaps = 6/455 (1%)

Query: 63  NRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME 122
           +R  G    T+     L++A      M+     P +V+ + LL ++ K+      I +  
Sbjct: 34  SRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFH 93

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
            M   GI  D  +Y  ++NCLC+      A+ +V KM  +GY  + VT +SL+ G C   
Sbjct: 94  NMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGN 153

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
            +  ++  + ++ +     +   Y+ +++   K   V+ A+ L   +   G + + V+YN
Sbjct: 154 RVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYN 213

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            L+TGLC  GR  +A R  RD+  +   PNV+++  L+ +   EG++ EA +   EM   
Sbjct: 214 SLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRR 273

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSEGKVDL 361
              P + TYN +I  L  HG+ D A ++LD MV KG F P   +YN +I   C   +VD 
Sbjct: 274 CIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCF-PDVVTYNTLINGFCKTKRVDE 332

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
             K + +M  R    +  T+N +       G+   A  I   +G++ N      Y  ++ 
Sbjct: 333 GTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRT---YSILLY 389

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            LC   +  +A  L   M K     D  TY+ +I G+CM G +E+A ++F  +     +P
Sbjct: 390 GLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEP 449

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           DV  +  ++ G C+ R  D +  +++ M E G +P
Sbjct: 450 DVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 203/432 (46%), Gaps = 4/432 (0%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           + +AI +   M+ S  +P    ++ L++ + K  N    + L   ME  G   +  TYN 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           ++  LC       +L  + ++++ G  P+  T S L+    +   V  A+ L+  +    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            K ++V YN ++ G CK G    A+  F  +   G   + V+YN L+  LC  GR  +A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L+ +M   D  P ++T+  LI +    GK   A K  +EM++    P   +YN +I  L
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C  G+VD   + LD M  + C P+  TYN L    C   +V E   +++ +  +      
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             +  +I    + G+   A ++   M   G  P+  TYS L+ GLC    +E+AL +F  
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFES 406

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M++ + + D+  +N ++ G+C     + + ++F  +  KG  P+  TYT ++ G   +  
Sbjct: 407 MQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRL 466

Query: 533 LELSAEVLKELQ 544
            + +  + +++Q
Sbjct: 467 WDKADFLYRKMQ 478



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 161/364 (44%), Gaps = 34/364 (9%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           NL++++     +IQ   +P+   +S LL    K +     + L  ++   G   +L +YN
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           +++  LC+  R   A+     +   G+EP+VV+ + L+   C   R   A +L+++M+  
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
                +V YN +I      G  ++AL +   M +   R    +YN ++  LC  G+    
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
            + +  M  R   PN  T+  L                                  I + 
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAL----------------------------------INAF 254

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
            R+GK  +A +   EM +    PD +TY+S+I GLCM G ++EA +I  +M      PDV
Sbjct: 255 VREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDV 314

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N L+ G CK++R D   ++ + M ++G + +  T+  +++G       + + E+   
Sbjct: 315 VTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSR 374

Query: 543 LQLR 546
           +  R
Sbjct: 375 MGSR 378



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 1/312 (0%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EAI  F ++      P++V ++ LL ++     ++    L   M+       + TYNI+
Sbjct: 51  DEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    +   AL V+ +M+K  + P   + + +I   C   +V   V  + +M   RC
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           K +   YN +    C  G V  A  +   +      +    Y  ++T LC  G+   A +
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L+ +M      P+  T+++LI     EG   EA + +  M      PDV  +N+++ GLC
Sbjct: 231 LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLC 290

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
              + D + ++  +M+ KG  P+  TY  L+ G      ++   ++++E+  R +V ++ 
Sbjct: 291 MHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTV 350

Query: 554 VERLVMQYDFEG 565
               ++Q  F+ 
Sbjct: 351 TFNTIIQGYFQA 362


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 216/432 (50%), Gaps = 4/432 (0%)

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
           S I P+  S+  ++  LC+ GNV  A+++   M D     +  TY++L+ GLC  G +++
Sbjct: 169 SNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDE 228

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           ++  LD +  +G  PN   ++ L+ A  K+  +  A KL+D++  KG  PN V+YN L+ 
Sbjct: 229 AVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVH 288

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           GLC +G+ ++A+     + +    PN +++  L+      GR  +   +L  ++      
Sbjct: 289 GLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRG 348

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
              +Y+ LI  L   GK +H +++  EMV+   +P+   Y+ +I  LC EGK D   + L
Sbjct: 349 NEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYL 408

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            +M ++   PN  TY+ L       G + +A  + + + +   +  +  Y  +I  LC+ 
Sbjct: 409 IEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKN 468

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK--PDVD 483
           GK  +A  +  +M   G   D   YSS+I G C   L+E+ +++F  M  ++ K  PDV 
Sbjct: 469 GKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVV 528

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA-HQDELELSAEVLKE 542
            +N LL   C       ++++   M+++G  P+  T  I ++ +  + D  +   E L E
Sbjct: 529 TYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDE 588

Query: 543 LQLRQVVSESAV 554
           L +R +  +  V
Sbjct: 589 LVVRLIKRQRTV 600



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 217/454 (47%), Gaps = 31/454 (6%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           + L++ LC   ++ +A+ +++ M   G  P+  ++  L++ LCKKG++  A +LV+ M  
Sbjct: 214 STLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFL 273

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   N VTYNSLV GLC+ G L++++  L+R++    VPN  T+  L++   K      
Sbjct: 274 KGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALD 333

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
            +++L  +  KG + N  SY+ L++GL KEG+ E  ++ ++++  KG +PN + Y+ L+ 
Sbjct: 334 GVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALID 393

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC EG+ +EA E L EM     +P   TY+ L+      G    A+ V  EM       
Sbjct: 394 GLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNH 453

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
               Y+ +I  LC  GK+   +    QM  R  K +   Y+ +    C    V++   + 
Sbjct: 454 HEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLF 513

Query: 401 -QSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            Q L +     P    Y  ++ + C K    +A  +L  M   G  PD  T    ++ L 
Sbjct: 514 NQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL- 572

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNF-NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
                          +  D   D   F + L++ L K +RT  +  + ++M++K  +P  
Sbjct: 573 --------------RDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKP 618

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +T+ + V+            ++ K +++R+ +SE
Sbjct: 619 STWALAVQ------------QLCKPMKVRKTISE 640


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 215/440 (48%), Gaps = 1/440 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM      P        L+ L KA +   +      MV +GI P   +Y  ++  +CK+G
Sbjct: 87  RMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEG 146

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           ++  A  L E+M+  G   + VTYN+L+ G   +G L++S+   + +   G  P+  TY+
Sbjct: 147 DMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYN 206

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+ +  K +G+  A +   ++  K  KPN++SY+ L+  LCKEG  + AI+FF D+   
Sbjct: 207 ALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRV 266

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  PN  +Y+ L+ + C  G   EA  L  EM        IVTY  L+  L   G  + A
Sbjct: 267 GLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEA 326

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            ++   M K    P+  +Y  +I        +D  ++  ++M  +  KP+   +  +   
Sbjct: 327 EELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWG 386

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC   K++E   I+  +      +    Y  ++ +  + G   +A  LL EM   G    
Sbjct: 387 LCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVT 446

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             T+ +LI GLC  GL++EA+  F  M ++D +P+V  + AL+ GLCK+     + ++F 
Sbjct: 447 VVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFD 506

Query: 507 MMIEKGQMPNETTYTILVEG 526
            M +K  +P++  YT +++G
Sbjct: 507 EMQDKNMIPDKIAYTAMIDG 526



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 204/459 (44%), Gaps = 11/459 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E+M   G  PD+V    L+    K   + +++ + E M   G  PD  +Y  L+N  CK
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCK 214

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A +   +M+D     N ++Y++L+  LC  G +  +++F   + + GL+PN FT
Sbjct: 215 FKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFT 274

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS L++A  K   +  A  L D+++ +    N+V+Y  LL GLC+EG   EA   FR + 
Sbjct: 275 YSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMG 334

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PN+ +Y  L+         ++A EL  EM   D  P I+ +  ++  L    K +
Sbjct: 335 KAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLE 394

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
               ++ EM +     +   Y  ++      G     +  L++M     +    T+  L 
Sbjct: 395 ECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALI 454

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  G VQEA      + +         Y  +I  LC+      A +L  EM      
Sbjct: 455 DGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMI 514

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD   Y+++I G    G  +EAL +   M E   + D+  + +L+ GL +  +   + + 
Sbjct: 515 PDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKF 574

Query: 505 FQMMIEKGQMPNETTYTILV----------EGIAHQDEL 533
              MI KG +P+ET  T L+          E I  Q+EL
Sbjct: 575 LAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNEL 613



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 183/395 (46%), Gaps = 13/395 (3%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF     M  K  KP+V+  + L+  LCK   M+ AIK    M   G++P+  +Y+ L++
Sbjct: 221 AFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLID 280

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK GN+G A  L ++M       N VTY +L+ GLC  G +N++ +    + + G+ P
Sbjct: 281 ANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTP 340

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N   Y+ L+    K R +  AM+L +++  K  KP+++ +  ++ GLC E + EE     
Sbjct: 341 NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++   G   N V Y  L+ +    G   EA  LL EM       T+VT+  LI  L   
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKR 460

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    A+     M     +P+ A Y  +I  LC    +    K  D+M  +   P++  Y
Sbjct: 461 GLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAY 520

Query: 382 NGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC----RKGKTYQAFQL 434
              AM+ G    G  QEA     ++ NK      E   Y  TSL     + G+  QA + 
Sbjct: 521 T--AMIDGNLKHGNFQEAL----NMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKF 574

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           L EM   G  PD    + L+R     G I+EA+E+
Sbjct: 575 LAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIEL 609



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 182/429 (42%), Gaps = 36/429 (8%)

Query: 100 QATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
            A N+L +L  ++ +     V E++ ++    +P    +  L + L + G +  A Q   
Sbjct: 27  HANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFL 86

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
           +M  +       + N+ +  L   G  + S  F   ++  G+ P  FTY+ ++    KE 
Sbjct: 87  RMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEG 146

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
            +  A  L + +   G  P++V+YN L+ G  K G  +E++  F ++   G EP+V++YN
Sbjct: 147 DMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYN 206

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            L+ S C       A E   EM   D  P +++Y+ LI +L   G    A+K   +M + 
Sbjct: 207 ALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRV 266

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAF 397
              P+  +Y+ +I   C  G +       D+M       N  TY  L             
Sbjct: 267 GLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTL------------- 313

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
                                +  LC +G   +A +L   M K G TP+   Y++LI G 
Sbjct: 314 ---------------------LDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGH 352

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
                +++A+E+F  M E D KPD+  +  ++ GLC   + +    +   M E G   N 
Sbjct: 353 IKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANP 412

Query: 518 TTYTILVEG 526
             YT L++ 
Sbjct: 413 VIYTTLMDA 421



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 157/334 (47%), Gaps = 13/334 (3%)

Query: 48  TQVTISPKDSVYTK---PNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNL 104
           T+V + P +  Y+     N K GN          L +AF+  + M+ +    ++V  T L
Sbjct: 264 TRVGLLPNEFTYSSLIDANCKAGN----------LGEAFMLADEMLQEHVDLNIVTYTTL 313

Query: 105 LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY 164
           L  LC+   M +A ++   M  +G+ P+  +YT L++   K  ++  AM+L  +M +   
Sbjct: 314 LDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDI 373

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
             + + + ++V GLC    L +    +  + + G+  N   Y+ L++A +K      A+ 
Sbjct: 374 KPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAIN 433

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           LL+++   G +  +V++  L+ GLCK G  +EAI +F  +P    +PNV  Y  L+  LC
Sbjct: 434 LLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLC 493

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
                 +A +L  EM   +  P  + Y  +I     HG    AL + ++M++        
Sbjct: 494 KNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLY 553

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
           +Y  ++  L   G+V    K L +M  +   P+E
Sbjct: 554 AYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDE 587



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 1/114 (0%)

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
            F++L+  T+    P    + +L   L   G++E A + F+ M ++   P   + NA L 
Sbjct: 47  VFEILWT-TRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLH 105

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            L K+   DLS + F+ M+  G  P   TY I++  +  + ++  +  + ++++
Sbjct: 106 RLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMK 159


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 229/491 (46%), Gaps = 38/491 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +  +A   L  M +KG  P+ +     +    ++ + K+A++V+  M S G+ PD  
Sbjct: 262 KEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVI 321

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY   +      G    ++ L+++M   G   NT+ +NS +      G   ++++ L  +
Sbjct: 322 SYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREV 381

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GL P+A +++  + A  K      A++LL ++ AK  KP+ +SYN  +    K G+ 
Sbjct: 382 TALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQW 441

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A+   R +P+KG  PNV+S NI +R+    GRW+E  ELL +M     +P ++TYN  
Sbjct: 442 EMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSA 501

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE------------------ 356
           I +    G+ + AL +L +M +    P + +YN  IA  CS+                  
Sbjct: 502 IKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIA-ACSKRGRWKEAVALLREMPGQG 560

Query: 357 ------------------GKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAF 397
                             G+ +  V+ L QM  +   PN  TYN +   CG  G+ ++A 
Sbjct: 561 LTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKAL 620

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            +++ L     +     Y   I++  ++G+  +A  LL EM   G TPD  +Y+S IR  
Sbjct: 621 DLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRAC 680

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
             EG  E+AL +  +M  +   P   +++  +    K  R + ++ + + M ++G     
Sbjct: 681 NAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRN 740

Query: 518 TTYTILVEGIA 528
            + +++VE + 
Sbjct: 741 ISNSLIVEALG 751



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 217/450 (48%), Gaps = 1/450 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M S G  PD +   +++    K  + K+A+ V+  M + G+ P+  SY   +    +
Sbjct: 238 LREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGR 297

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A++++ +ME  G   + ++Y++ ++     G    S+  LD +  +G+ PN   
Sbjct: 298 SGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIH 357

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++  + A  K      A++LL ++ A G  P+  S+N  +    K GR +EA+   +++P
Sbjct: 358 FNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMP 417

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +K  +P+ +SYN  + +    G+WE A EL  +M     +P +++ NI I +    G+  
Sbjct: 418 AKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQ 477

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
             L++L +M      P+  +YN  I      G+ +  +  L +M      P+  TYN   
Sbjct: 478 EGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAI 537

Query: 386 MLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             C   G+ +EA A+++ +  +  +     Y   I +  + G+  +A +LL +M   G T
Sbjct: 538 AACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLT 597

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  TY+S+I+     G  E+AL++   ++E    PD+ ++N  +    K  R + +L++
Sbjct: 598 PNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDL 657

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            + M  +G  P+  +YT  +     + E E
Sbjct: 658 LREMPAEGLTPDVISYTSAIRACNAEGEWE 687



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 222/474 (46%), Gaps = 9/474 (1%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           +G  P+V    + +      ++ + A+ ++  M    ++PD  SY   +    + G    
Sbjct: 174 EGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWER 233

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
            + L+ +M   G   + +TYNS++ G    G   ++L  L  +  KGL P   +Y+  + 
Sbjct: 234 VIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIR 293

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
           A  +      A+++L  + ++G  P+++SY+  +      G+ E ++    ++  +G  P
Sbjct: 294 ACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAP 353

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N + +N  + +    G+WE+A ELL E+     +P   ++N  I +    G+   AL++L
Sbjct: 354 NTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELL 413

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-V 390
            EM   R +P A SYN  I      G+ ++ ++   QM  +   PN  + N     CG  
Sbjct: 414 KEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGER 473

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           G+ QE   +++ +   Q  +P    Y   I +  + G+  +A  LL +M +   TPDS T
Sbjct: 474 GRWQEGLELLRQM-PAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSIT 532

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y+S I      G  +EA+ +   M      PDV ++ A +    K+ + + ++E+ + M 
Sbjct: 533 YNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMP 592

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            KG  PN  TY  +++      E E + ++LKEL+      E+AV   +M Y+ 
Sbjct: 593 TKGLTPNVITYNSVIKACGRGGEWEKALDLLKELK------ETAVAPDLMSYNL 640



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 210/444 (47%), Gaps = 2/444 (0%)

Query: 102 TNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
           T  +    +  + +KA++++ E+    G+ P+   Y   +           A+ L+ +M 
Sbjct: 148 TTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMA 207

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
           D     + ++YNS ++     G   + +  L  +   GL P+A TY+ ++    KE    
Sbjct: 208 DREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWK 267

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A+ +L ++ AKG  P  +SYN+ +    + GR +EA+   R + S+G  P+V+SY+  +
Sbjct: 268 EALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAI 327

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           ++    G+WE + +LL EM G   +P  + +N  I +    G+ + A+++L E+      
Sbjct: 328 KACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLT 387

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAII 400
           P A S+N  IA     G+    ++ L +M  +R KP+  +YN     CG G   E    +
Sbjct: 388 PDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALEL 447

Query: 401 QSLGNKQNSSPQEFYKYVITSLC-RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           +     +  +P      +    C  +G+  +  +LL +M   G TP+  TY+S I+    
Sbjct: 448 RRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGK 507

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G  E+AL++   M+E    PD   +N+ +    K  R   ++ + + M  +G  P+  +
Sbjct: 508 GGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVIS 567

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
           YT  ++      + E + E+L+++
Sbjct: 568 YTAAIDAYGKNGQWERAVELLRQM 591



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 161/375 (42%), Gaps = 42/375 (11%)

Query: 210 LEAAYKERGVHA----AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           L+AA +E         A+ +LD++  +GG     SY   +T   ++G+ E+A+   R++P
Sbjct: 113 LQAALREAATTGKWREALGILDEM-KEGGVVCAHSYTTAITTCGRQGQWEKALELLREIP 171

Query: 266 SK-GFEPNV-----------------------------------VSYNILLRSLCMEGRW 289
            + G  PNV                                   +SYN  +++    G+W
Sbjct: 172 EQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQW 231

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           E    LL EM     +P  +TYN +I      G+   AL VL EM      P   SYN  
Sbjct: 232 ERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMA 291

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE-AFAIIQSLGNKQN 408
           I      G+    V+ L QM  +   P+  +Y+     CG G   E +  ++  +  +  
Sbjct: 292 IRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGV 351

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +     +   I +  + G+  +A +LL E+T  G TPD+ +++S I      G  +EALE
Sbjct: 352 APNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALE 411

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   M     KPD  ++N+ +    K  + +++LE+ + M  KG  PN  +  I +    
Sbjct: 412 LLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACG 471

Query: 529 HQDELELSAEVLKEL 543
            +   +   E+L+++
Sbjct: 472 ERGRWQEGLELLRQM 486


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 213/453 (47%), Gaps = 38/453 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DAFL L       H+P       LL  L  A ++  A K     +   + PD  ++  ++
Sbjct: 140 DAFL-LAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVI 198

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM---LGNLNQSLQFLDRLIQK 197
           + LC+ G +  A  + + ++ +G   +  TYNSL+ G C     GN+      L  +++ 
Sbjct: 199 SGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEA 258

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P A T+  L+    K     AA+++ +++  +G   ++V+YN L++GLC EG+ EE 
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++   ++   G  PN +++  +L+  C +G   +AN+ +  M   +  P +V YNILI  
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDV 378

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK + A+ V + M K    P+  +YN +I      G        LD+M  +  + +
Sbjct: 379 YRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  I +LC KG+  +A +LL E
Sbjct: 439 VVTYNVL----------------------------------IGALCCKGEVRKAVKLLDE 464

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M++ G  P+  TY+++I+G C +G I+ A EI   ME+   + +V  +N  +   C+  +
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            D + ++   M++K  +PN  TY  + EG+  +
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 177/358 (49%), Gaps = 20/358 (5%)

Query: 93  GHKPDVVQATNLLYDLCK---ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           G  P V    +L+   CK   A  M     +++ MV +GI P A ++  L+N  CK  N 
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             A+++ E+M+  G   + VTYNSL+ GLC  G + + ++ ++ +   GL PN  T+  +
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           L+   K+  +  A   +D +  +  +P++V YN+L+    + G+ E+A+     +  KG 
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGI 400

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            PNV +YN L+      G W  A+ LL EM        +VTYN+LIG+L   G+   A+K
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLC 388
           +LDEM +    P+  +YN II   C +G +    +   +M   R + N  TYN  +   C
Sbjct: 461 LLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFC 520

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            +GK+ EA  ++  + +K               L   G TY+  +    M + G+TPD
Sbjct: 521 QIGKMDEANDLLNEMLDK--------------CLVPNGITYETIK--EGMMEKGYTPD 562



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 4/348 (1%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  + + LL      + V  A K     + +   P++ ++N +++GLC+ G+  +A   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEG---RWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +D+ + G  P+V +YN L+   C +G        + LL EM     SPT VT+ +LI  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +  T  A++V +EM +     S  +YN +I+ LCSEGKV+  VK +++M      PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           E T+   L   C  G + +A   I  +  +        Y  +I    R GK   A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M K G +P+  TY+ LI G    G    A  +   M+E   + DV  +N L+  LC   
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               ++++   M E G  PN  TY  +++G   +  ++ + E+   ++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 146/320 (45%), Gaps = 42/320 (13%)

Query: 65  KPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM 124
           K G   +  H D       + L+ MV  G  P  V    L+   CK +    A++V E M
Sbjct: 238 KKGGAGNMYHVD-------MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM 290

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC----- 179
              GI     +Y  L++ LC +G V   ++L+E+MED G   N +T+  +++G C     
Sbjct: 291 KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMM 350

Query: 180 ------------------------------MLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
                                          LG +  ++   + + +KG+ PN  TY+ L
Sbjct: 351 ADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCL 410

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           +    +     +A  LLD++  KG + ++V+YNVL+  LC +G   +A++   ++   G 
Sbjct: 411 ITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           EPN ++YN +++  C +G  + A E+   M+   +   +VTYN+ I      GK D A  
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAND 530

Query: 330 VLDEMVKGRFRPSAASYNPI 349
           +L+EM+     P+  +Y  I
Sbjct: 531 LLNEMLDKCLVPNGITYETI 550



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 178/381 (46%), Gaps = 4/381 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +T + N+L+ GL     ++ + +     +++ + P+ +T++ ++    +   +  A  + 
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR---FFRDLPSKGFEPNVVSYNILLRSL 283
            DI A G  P++ +YN L+ G CK+G            +++   G  P  V++ +L+   
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C       A  +  EM     + ++VTYN LI  L   GK +  +K+++EM      P+ 
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            ++  ++   C +G +      +D M  R  +P+   YN L  +   +GK+++A A+ ++
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  K  S     Y  +IT   R G    A  LL EM + G   D  TY+ LI  LC +G 
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           + +A+++   M E   +P+   +N ++ G C       + E+   M +  +  N  TY +
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 523 LVEGIAHQDELELSAEVLKEL 543
            ++      +++ + ++L E+
Sbjct: 515 FIKYFCQIGKMDEANDLLNEM 535



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 43/331 (12%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P+  S N LL GL    R + A + FR    +   P++ ++N ++  LC  G+  +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTD---HALKVLDEMVKGRFRPSAASYNPIIA 351
           +  ++     +P++ TYN LI      G      H   +L EMV+    P+A ++  +I 
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
             C        V+  ++M  +    +  TYN L                           
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL--------------------------- 305

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
                  I+ LC +GK  +  +L+ EM   G +P+  T+  +++G C +G++ +A +   
Sbjct: 306 -------ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M E + +PDV  +N L+    +  + + ++ V + M +KG  PN TTY  L+ G +   
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           +   ++ +L E++      E  +E  V+ Y+
Sbjct: 419 DWRSASGLLDEMK------EKGIEADVVTYN 443



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 116/249 (46%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + K+ +    +E M   G  P+ +    +L   CK   M  A   ++ M    + PD   
Sbjct: 312 EGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVI 371

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L++   + G +  AM + E M   G   N  TYN L+ G    G+   +   LD + 
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +KG+  +  TY+ L+ A   +  V  A+KLLD++   G +PN ++YN ++ G C +G  +
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A      +       NVV+YN+ ++  C  G+ +EAN+LL EM      P  +TY  + 
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIK 551

Query: 316 GSLAYHGKT 324
             +   G T
Sbjct: 552 EGMMEKGYT 560



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 93/186 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K+ DA    E M  KG  P+V     L+    ++   + A  +++ M   GI 
Sbjct: 377 DVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L+  LC KG V  A++L+++M + G   N +TYN++++G C  GN+  + + 
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ +     N  TY+  ++   +   +  A  LL++++ K   PN ++Y  +  G+ +
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556

Query: 251 EGRTEE 256
           +G T +
Sbjct: 557 KGYTPD 562


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 230/509 (45%), Gaps = 47/509 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+DA     +M S  HKPD V    LL        + K  K+   M + G  PD  ++T
Sbjct: 314 KLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFT 373

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN LCK G +  A  L++ M   G   N  TYN+L+ GL     L+ +L     +   
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESL 433

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P A+TY  L++   K      A++  + + A+G  PN+V+ N  L  L + GR  EA
Sbjct: 434 GVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEA 493

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F +L S G  P+ V+YN++++     G+ +EA +LL+EM      P ++  N LI +
Sbjct: 494 KAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDT 553

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A ++   M +    P+  +YN ++A L  EG++   V+  + M    C PN
Sbjct: 554 LYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPN 613

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             T+N L   LC   +V  A  +   +    N  P    +  +I    ++ +   A  L 
Sbjct: 614 TITFNTLLDCLCKNDEVDLALKMFYKM-TTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF 672

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK--PDVDNF-------- 485
           ++M K    PD  T  +L+ G+   G IE+A   F + E++ Y+   ++D          
Sbjct: 673 HQMKKL-LRPDHVTLCTLLPGVIKSGQIEDA---FRITEDFFYQVGSNIDRSFWEDVMGG 728

Query: 486 --------NALLLG---------------------LCKSRRTDLSLEVF-QMMIEKGQMP 515
                    A+L G                     LCK ++T ++  VF +   E G  P
Sbjct: 729 ILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKP 788

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQ 544
               Y +L++G      +E++  + +E++
Sbjct: 789 TLKVYNLLIDGFLEVHNVEVAWNLFEEMK 817



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 221/460 (48%), Gaps = 35/460 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD K+++A+  ++RM   G  PDVV  T L+  LC A K+  A+ +   M SS   PD  
Sbjct: 276 RDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKV 335

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++     G++    ++  +ME  GY  + VT+  LV  LC  G +N++   LD +
Sbjct: 336 TYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTM 395

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G++PN  TY+ L+    +   +  A+ L  ++ + G +P   +Y +L+    K G  
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHP 455

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+  F  + ++G  PN+V+ N  L SL   GR  EA  +  E+     +P  VTYN++
Sbjct: 456 GKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMM 515

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+ D A+K+L EM K +  P     N +I  L   G+V+   +   +M     
Sbjct: 516 MKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNL 575

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            P   TYN   +L G+GK                                +G+  +A QL
Sbjct: 576 APTVVTYN--ILLAGLGK--------------------------------EGQIQKAVQL 601

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M  +G +P++ T+++L+  LC    ++ AL++F  M   + +PDV  FN ++ G  K
Sbjct: 602 FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             +   ++ +F  M +K   P+  T   L+ G+    ++E
Sbjct: 662 QNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIE 700



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 225/459 (49%), Gaps = 1/459 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE+M   G   +      L++ L ++   K+A++V   MVS G+ P   +++ L+    K
Sbjct: 182 LEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGK 241

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           + N+   M L+E+ME  G   N  TY   +R L   G ++++ + + R+   G  P+  T
Sbjct: 242 RRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVT 301

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++A    R +  AM L   + +   KP+ V+Y  LL      G  ++  + + ++ 
Sbjct: 302 YTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEME 361

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G+ P+VV++ IL+ +LC  GR  EA +LL  M      P + TYN LI  L    + D
Sbjct: 362 ADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLD 421

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
            AL +   M      P+A +Y  +I      G     ++  ++M  R   PN    N  L
Sbjct: 422 DALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASL 481

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             L  +G++ EA A+   L +   +     Y  ++    + G+  +A +LL EM+K    
Sbjct: 482 YSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCE 541

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD    +SLI  L   G +EEA ++F  MEE +  P V  +N LL GL K  +   ++++
Sbjct: 542 PDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           F+ M   G  PN  T+  L++ +   DE++L+ ++  ++
Sbjct: 602 FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKM 640



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/527 (24%), Positives = 247/527 (46%), Gaps = 41/527 (7%)

Query: 58  VYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA 117
           V  KP RK  ++++     H ++D    L    S G  P+VV  T     + +  ++ + 
Sbjct: 81  VNGKP-RKGSSSDEVLGVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRR 139

Query: 118 IK----VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           ++    V ++M    I  +  +Y  +   L  +G +  A   +EKM + G+  N  +YN 
Sbjct: 140 VEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNG 199

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L+  L   G   ++L+   R++ +GL P+  T+S L+ A+ K R +   M LL+++ + G
Sbjct: 200 LIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            +PN+ +Y + +  L ++G+ +EA R  + +   G  P+VV+Y +L+ +LC   + ++A 
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAM 319

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            L  +M      P  VTY  L+   +  G  D   K+  EM    + P   ++  ++  L
Sbjct: 320 CLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNAL 379

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEA---FAIIQSLG----- 404
           C  G+++     LD M  +   PN  TYN L + L    ++ +A   F+ ++SLG     
Sbjct: 380 CKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTA 439

Query: 405 ---------NKQNSSP----QEFYKY--------------VITSLCRKGKTYQAFQLLYE 437
                    + ++  P    + F K                + SL   G+  +A  +  E
Sbjct: 440 YTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNE 499

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +   G  PDS TY+ +++     G ++EA+++   M +   +PDV   N+L+  L K+ R
Sbjct: 500 LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGR 559

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            + + ++F  M E    P   TY IL+ G+  + +++ + ++ + + 
Sbjct: 560 VEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMN 606



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 222/491 (45%), Gaps = 39/491 (7%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++ +++ A     +M +   +PDV+    +++   K N++K AI +   M    + 
Sbjct: 622  DCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLR 680

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  +   L+  + K G +  A ++ E      G   +   +  ++ G+       +++ 
Sbjct: 681  PDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAIL 740

Query: 190  FLDRLIQK------------------------------------GLVPNAFTYSFLLEAA 213
            F +RL+ +                                    G+ P    Y+ L++  
Sbjct: 741  FGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGF 800

Query: 214  YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
             +   V  A  L +++ + G  P+  +YN L+    K G+  E    + ++ ++G +PN 
Sbjct: 801  LEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNT 860

Query: 274  VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
            ++YN+++ +L    R ++A +L   +  GD SPT  T+  LI  L   G+ D A ++ D 
Sbjct: 861  ITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDG 920

Query: 334  MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
            MV    RP++A YN ++      G VD   +   +M     +P+  +Y  L  +LC  G+
Sbjct: 921  MVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGR 980

Query: 393  VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            V +A    + L           Y  +I  L R  +T +A  L +EM   G  PD YTY+S
Sbjct: 981  VDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNS 1040

Query: 453  LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
            LI  L + G+IEEA +I+  ++    KP+V  +NAL+ G   S  ++L+  +++ M+  G
Sbjct: 1041 LILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGG 1100

Query: 513  QMPNETTYTIL 523
              PN  T+  L
Sbjct: 1101 CDPNTGTFAQL 1111



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 218/484 (45%), Gaps = 4/484 (0%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            DT ++  ++ +A+    RM      P VV    LL  L K  +++KA+++ E M   G  
Sbjct: 552  DTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCS 611

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  ++  L++CLCK   V  A+++  KM       + +T+N+++ G      +  ++  
Sbjct: 612  PNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWL 671

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-GGKPNLVSYNVLLTGLC 249
              ++ +K L P+  T   LL    K   +  A ++ +D   + G   +   +  ++ G+ 
Sbjct: 672  FHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGIL 730

Query: 250  KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG-DRSPTI 308
             E  TE+AI F   L  +    +      +++ LC   +   A  +  +        PT+
Sbjct: 731  TEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTL 790

Query: 309  VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
              YN+LI         + A  + +EM      P   +YN +I      GK++ +    D+
Sbjct: 791  KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDE 850

Query: 369  MFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
            M  R CKPN  TYN  ++ L    ++ +A  +  +L +   S     +  +I  L + G+
Sbjct: 851  MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910

Query: 428  TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
               A ++   M  YG  P+S  Y+ L+ G    G ++ A E F  M +   +PD+ ++  
Sbjct: 911  LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970

Query: 488  LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
            L+  LC + R D +L  F+ + + G  P+   Y +++ G+      E +  +  E+Q R 
Sbjct: 971  LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030

Query: 548  VVSE 551
            +V +
Sbjct: 1031 IVPD 1034



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 176/394 (44%), Gaps = 34/394 (8%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  TY  + + L + G L Q+   L+++ + G V NA++Y+ L+    +      A+++ 
Sbjct: 158 NVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVY 217

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             ++++G KP+L +++ L+    K    +  +    ++ S G  PN+ +Y I +R L  +
Sbjct: 218 RRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRD 277

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G+ +EA  ++  MD     P +VTY +LI +L    K D A+ +  +M     +P   +Y
Sbjct: 278 GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
             ++ +    G +D V K   +M      P+  T+  L                      
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTIL---------------------- 375

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                       + +LC+ G+  +AF LL  M K G  P+ +TY++LI GL     +++A
Sbjct: 376 ------------VNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDA 423

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L++F  ME    +P    +  L+    KS     +LE F+ M  +G  PN       +  
Sbjct: 424 LDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYS 483

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +A    L  +  +  EL+   +  +S    ++M+
Sbjct: 484 LAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMK 517



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 149/338 (44%), Gaps = 7/338 (2%)

Query: 233 GGKPNLV----SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           G  PN+V    + N +L  L    R E+    F  +  +    NV +Y I+ +SL + G 
Sbjct: 115 GELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGG 174

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             +A   L +M          +YN LI  L   G    AL+V   MV    +PS  +++ 
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSA 234

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQ 407
           ++        +  V+  L++M     +PN  TY     + G  GK+ EA+ I++ + +  
Sbjct: 235 LMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG 294

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                  Y  +I +LC   K   A  L  +M      PD  TY +L+      G +++  
Sbjct: 295 CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVE 354

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +I+  ME   Y PDV  F  L+  LCK+ R + + ++   M ++G +PN  TY  L+ G+
Sbjct: 355 KIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGL 414

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
              + L+ + ++   ++   V  E      ++  D+ G
Sbjct: 415 LRANRLDDALDLFSNMESLGV--EPTAYTYILLIDYHG 450


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 225/469 (47%), Gaps = 42/469 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
             H  + A   L  M+ +GH P      NLL  L ++N   KA  +   +  S ++ DA 
Sbjct: 101 HSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL-KSKVVLDAY 159

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+  ++   C+ G      +L+  +E++G   N V Y +L+ G C  GN+  +     ++
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKM 219

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GLVPN  TYS L+   +K+       ++ +++   G  PN  +YN L++  C +G  
Sbjct: 220 NRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMV 279

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A + F ++  KG    V++YNIL+  LC   ++ EA +L+ +++    SP IVTYNIL
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD---QMFH 371
           I       K D A+++ +++      P+  +YN +IA      KV+ +   LD   +M  
Sbjct: 340 INGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIA---GYSKVENLAGALDLVKEMEE 396

Query: 372 RRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           R   P++ TY  L          +AFA                         R   T +A
Sbjct: 397 RCIAPSKVTYTILI---------DAFA-------------------------RLNHTEKA 422

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++   M K G  PD YTYS L+ GLC+ G ++EA ++F  + E   +P+   +N ++ G
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            CK   +  +L +   M++ G +PN  ++   + G+  +DE    AE+L
Sbjct: 483 YCKEGSSYRALRLLNEMVQSGMVPNVASFCSTI-GLLCRDEKWKEAELL 530



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 172/391 (43%), Gaps = 34/391 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P+VV  T L+   CK   +  A  +   M   G++P+  +Y+ L+N   K+G     
Sbjct: 188 GLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREG 247

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            Q+ E M+  G   N   YN L+   C  G ++++ +    + +KG+     TY+ L+  
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             + +    A+KL+  +   G  PN+V+YN+L+ G C   + + A+R F  L S G  P 
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPT 367

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           +V+YN L+           A +L+ EM+    +P+ VTY ILI + A    T+ A ++  
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHS 427

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
            M K    P   +Y+ ++  LC  G                                   
Sbjct: 428 LMEKSGLVPDVYTYSVLLHGLCVHG----------------------------------N 453

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++EA  + +SLG          Y  +I   C++G +Y+A +LL EM + G  P+  ++ S
Sbjct: 454 MKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCS 513

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            I  LC +   +EA  +   M     KP V 
Sbjct: 514 TIGLLCRDEKWKEAELLLGQMINSGLKPSVS 544



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           + F   E M   G  P+      L+ + C    + KA KV   M   GI     +Y  L+
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LC+    G A++LV K+   G   N VTYN L+ G C +  ++ +++  ++L   GL 
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P   TY+ L+    K   +  A+ L+ ++  +   P+ V+Y +L+    +   TE+A   
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEM 425

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G  P+V +Y++LL  LC+ G  +EA++L   +      P  V YN +I     
Sbjct: 426 HSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G +  AL++L+EMV+    P+ AS+   I  LC + K       L QM +   KP+   
Sbjct: 486 EGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSL 545

Query: 381 Y 381
           Y
Sbjct: 546 Y 546



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 184/428 (42%), Gaps = 35/428 (8%)

Query: 116 KAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
           +A+  +  M+  G +P ++++  L+  L +      A  +  +++      +  ++  ++
Sbjct: 107 QALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKS-KVVLDAYSFGIMI 165

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
           +G C  G   +  + L  L + GL PN   Y+ L++   K+  V  A  L   +   G  
Sbjct: 166 KGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLV 225

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           PN  +Y+VL+ G  K+G   E  + + ++   G  PN  +YN L+   C +G  ++A ++
Sbjct: 226 PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKV 285

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
            AEM     +  ++TYNILIG L    K   A+K++ ++ K    P+  +YN +I   C 
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
             K+D  V+  +Q+      P   TYN L  + G  KV+                     
Sbjct: 346 VRKMDSAVRLFNQLKSSGLSPTLVTYNTL--IAGYSKVENLAG----------------- 386

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
                          A  L+ EM +    P   TY+ LI         E+A E+  +ME+
Sbjct: 387 ---------------ALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEK 431

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               PDV  ++ LL GLC       + ++F+ + E    PN   Y  ++ G   +     
Sbjct: 432 SGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYR 491

Query: 536 SAEVLKEL 543
           +  +L E+
Sbjct: 492 ALRLLNEM 499



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 195/428 (45%), Gaps = 11/428 (2%)

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT--YNSLVRG 177
           ++  ++SSG++P A S    +      G +  ++ L +  + +  P +T T  Y+++V  
Sbjct: 44  ILNHLLSSGMLPQAQSLILRL----ISGRIPSSLML-QLTQAHFTPCSTYTPLYDTVVNA 98

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
                + +Q+L FL  +I +G VP + T++ LL    +      A  + +++ +K    +
Sbjct: 99  YVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKV-VLD 157

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
             S+ +++ G C+ G   +  R    L   G  PNVV Y  L+   C +G    A  L  
Sbjct: 158 AYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFC 217

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +M+     P   TY++L+      G      ++ + M +    P+A +YN +I+  C++G
Sbjct: 218 KMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDG 277

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-Y 415
            VD   K   +M  +       TYN L   LC   K  EA  ++  + NK   SP    Y
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV-NKVGLSPNIVTY 336

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I   C   K   A +L  ++   G +P   TY++LI G      +  AL++   MEE
Sbjct: 337 NILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P    +  L+    +   T+ + E+  +M + G +P+  TY++L+ G+     ++ 
Sbjct: 397 RCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKE 456

Query: 536 SAEVLKEL 543
           ++++ K L
Sbjct: 457 ASKLFKSL 464



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 130/271 (47%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D  ++ AF     M  KG    V+    L+  LC+  K  +A+K++  +   G+ P+  +
Sbjct: 276 DGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVT 335

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L+N  C    +  A++L  +++  G     VTYN+L+ G   + NL  +L  +  + 
Sbjct: 336 YNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++ + P+  TY+ L++A  +      A ++   +   G  P++ +Y+VLL GLC  G  +
Sbjct: 396 ERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMK 455

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA + F+ L     +PN V YN ++   C EG    A  LL EM      P + ++   I
Sbjct: 456 EASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTI 515

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G L    K   A  +L +M+    +PS + Y
Sbjct: 516 GLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 116/240 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K  +A   + ++   G  P++V    L+   C   KM  A+++   + SSG+ P   
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLV 369

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+    K  N+  A+ LV++ME+     + VTY  L+     L +  ++ +    +
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLM 429

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GLVP+ +TYS LL        +  A KL   +     +PN V YN ++ G CKEG +
Sbjct: 430 EKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+R   ++   G  PNV S+   +  LC + +W+EA  LL +M      P++  Y ++
Sbjct: 490 YRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 43/347 (12%)

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  ++ A         A+  L  +I +G  P   ++N LL  L +    ++A   F +L 
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           SK    +  S+ I+++  C  G + +   LLA ++    SP +V Y  LI          
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC------- 203

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
                                       C +G V L      +M      PN  TY+   
Sbjct: 204 ----------------------------CKDGNVMLAKNLFCKMNRLGLVPNPHTYS--V 233

Query: 386 MLCGV---GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKY 441
           ++ G    G  +E F + +++  +    P  + Y  +I+  C  G   +AF++  EM + 
Sbjct: 234 LMNGFFKQGLQREGFQMYENM-KRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREK 292

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G      TY+ LI GLC      EA+++   + +    P++  +N L+ G C  R+ D +
Sbjct: 293 GIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSA 352

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + +F  +   G  P   TY  L+ G +  + L  + +++KE++ R +
Sbjct: 353 VRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 228/484 (47%), Gaps = 28/484 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M + G  P+ V    L+   CK  K   A K+++ M   G++P   ++   ++ LC 
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264

Query: 146 KGNVGYAMQLVEKM---EDYGYP-TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            G +  A ++   M   E+ G P  N +TY  ++ G C  G L ++   +D + +     
Sbjct: 265 SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFI 324

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  +Y+  L    +   +  A  +L +++  G +P++ SYN+++ GLCK G   +A    
Sbjct: 325 NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLM 384

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G  P+ V+Y+ LL   C +G+  EAN LL EM   + SP   T N+L+ SL   
Sbjct: 385 GLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKE 444

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH---------- 371
           G+   A  +L +M +  +     + N II  LC+ G++D  ++ ++ M+           
Sbjct: 445 GRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLG 504

Query: 372 -------------RRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
                        ++C P+  TY+ + + LC  G++ +A      + +K        Y  
Sbjct: 505 NSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDT 564

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            I S CR+GK   AFQ+L +M K G      TY+SLI GL  +  I E   +   M E  
Sbjct: 565 FIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKG 624

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             PDV  +N +L  LC+  R + +  V   M++KG  PN +++ IL++      + + S 
Sbjct: 625 VSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASH 684

Query: 538 EVLK 541
           EV +
Sbjct: 685 EVFE 688



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 229/481 (47%), Gaps = 30/481 (6%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           +P +     LL    + N+++    + + MV + + P+A ++  L+  LC  G++  A +
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L +KM   G   N  T+  LVRG C  G  ++ L+ L ++   G++PN   Y+ L+ +  
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK---GF-E 270
           KE   H A KL+D +   G  P++ ++N  ++ LC  G+  EA R FRD+      G   
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           PNV++Y ++L   C EG  EEA  L+  M        + +YNI +  L  +GK   A  V
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
           L EM+     P   SYN ++  LC  G +      +  M      P+  TY+ L    C 
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFY-KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
            GKV EA  ++  + +  N SP  +    ++ SL ++G+  +A  LL +M + G+  D+ 
Sbjct: 409 KGKVFEANNLLHEMIS-NNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTV 467

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYK-----------------------PDVDNF 485
           T + +I  LC  G +++A+EI   M  +                          PD+  +
Sbjct: 468 TCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTY 527

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           + ++ GLCK+ R D + + F  M+ KG  P+   Y   +     + ++  + +VLK+++ 
Sbjct: 528 STIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEK 587

Query: 546 R 546
           R
Sbjct: 588 R 588



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 229/510 (44%), Gaps = 28/510 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA    ++M ++G +P+      L+   C+A    K ++++  M + GI+P+   Y  
Sbjct: 163 LEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNT 222

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN-LNQSLQFLDRLIQK 197
           L++  CK+G    A +LV+KM + G   +  T+NS +  LC  G  L  S  F D  I +
Sbjct: 223 LISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDE 282

Query: 198 GL---VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            L    PN  TY  +L    KE  +  A  L+D +       NL SYN+ L GL + G+ 
Sbjct: 283 ELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKL 342

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA    +++   G EP++ SYNI++  LC  G   +A  L+  M      P  VTY+ L
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTL 402

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      GK   A  +L EM+     P+  + N ++  L  EG++      L +M  +  
Sbjct: 403 LHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGY 462

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQ--------SLGNKQNS--------------SP 411
             +  T N +   LC  G++ +A  I+         +LGN  NS              +P
Sbjct: 463 GVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTP 522

Query: 412 QEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I+ LC+ G+   A +   EM   G  PDS  Y + I   C EG I  A ++ 
Sbjct: 523 DLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVL 582

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             ME+      +  +N+L+LGL    +      +   M EKG  P+  TY  ++  +   
Sbjct: 583 KDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEG 642

Query: 531 DELELSAEVLKELQLRQVVSESAVERLVMQ 560
             +  +  VL E+  + +    +  R++++
Sbjct: 643 GRINDAPSVLDEMLQKGISPNISSFRILIK 672



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 214/466 (45%), Gaps = 28/466 (6%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+      L+  LC +  ++ A ++ + M + G  P+  ++  LV   C+ G     ++L
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + +M   G   N V YN+L+   C  G  + + + +D++ + GLVP+  T++  + A   
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264

Query: 216 ERGVHAAMKLLDD--IIAKGG--KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              +  A ++  D  I  + G   PN+++Y ++L G CKEG  EEA      +       
Sbjct: 265 SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFI 324

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N+ SYNI L  L   G+  EA  +L EM G    P I +YNI++  L  +G    A  ++
Sbjct: 325 NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLM 384

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
             M++    P   +Y+ ++   CS+GKV      L +M    C PN  T N L   L   
Sbjct: 385 GLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKE 444

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG-------- 442
           G++ EA  ++Q +  K           +I +LC  G+  +A +++  M  +G        
Sbjct: 445 GRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLG 504

Query: 443 ---------------FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
                           TPD  TYS++I GLC  G +++A + F+ M     +PD   ++ 
Sbjct: 505 NSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDT 564

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            +   C+  +   + +V + M ++G      TY  L+ G+  ++++
Sbjct: 565 FIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQI 610



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 214/445 (48%), Gaps = 24/445 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA + +  M+  G  PD V  + LL+  C   K+ +A  ++  M+S+   P+  +   
Sbjct: 377 LSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNV 436

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ L K+G +  A  L++KM + GY  +TVT N ++  LC  G L+++++ ++ +   G
Sbjct: 437 LLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG 496

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA-KGGKPNLVSYNVLLTGLCKEGRTEEA 257
                        AA    G ++ + L+DD I+ K   P+LV+Y+ +++GLCK GR ++A
Sbjct: 497 ------------SAALGNLG-NSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDA 543

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F ++ SKG +P+   Y+  + S C EG+   A ++L +M+    + T+ TYN LI  
Sbjct: 544 KKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILG 603

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    +      ++DEM +    P   +YN ++  LC  G+++     LD+M  +   PN
Sbjct: 604 LGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPN 663

Query: 378 EGTY----NGLAMLCGVGKVQEAFAI-IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             ++          C      E F I +   G+K+       Y  +   L   GK  +A 
Sbjct: 664 ISSFRILIKAFCKACDFKASHEVFEIALNVCGHKE-----ALYTLMFNELLVGGKVAEAK 718

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L        F   ++ Y  LI  LC +  +E A ++   + +  Y+ D  +F  ++ G 
Sbjct: 719 ELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGF 778

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNE 517
            K     ++ E+ + M+E     N+
Sbjct: 779 GKMGNKHVADELAERMMEMASESNK 803



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/532 (24%), Positives = 235/532 (44%), Gaps = 65/532 (12%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           +Q++  +   H P+V+    +L   CK   +++A  +++ M  +    +  SY   +  L
Sbjct: 278 MQIDEELGLPH-PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGL 336

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
            + G +  A  ++++M   G   +  +YN ++ GLC  G L+ +   +  +I+ G++P+ 
Sbjct: 337 IRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDT 396

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TYS LL     +  V  A  LL ++I+    PN  + NVLL  L KEGR  EA    + 
Sbjct: 397 VTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQK 456

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-----------------------D 300
           +  KG+  + V+ NI++ +LC  G+ ++A E++  M                        
Sbjct: 457 MNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTIS 516

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G   +P +VTY+ +I  L   G+ D A K   EM+    +P +A Y+  I   C EGK+ 
Sbjct: 517 GKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKIS 576

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
              + L  M  R C     TYN L +  G   ++ E + +I  +  K  S     Y +++
Sbjct: 577 SAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHML 636

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC--------------------- 458
             LC  G+   A  +L EM + G +P+  ++  LI+  C                     
Sbjct: 637 NCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGH 696

Query: 459 -------------MEGLIEEALEIFVVMEEYDYKPDVDNF--NALLLGLCKSRRTDLSLE 503
                        + G + EA E+F      D   D+ NF    L+  LCK  + + + +
Sbjct: 697 KEALYTLMFNELLVGGKVAEAKELFET--ALDRSFDIGNFLYKDLIDRLCKDEKLEAASD 754

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           V   +I+KG   +  ++  +++G        ++ E+ +  ++ ++ SES  E
Sbjct: 755 VLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAE--RMMEMASESNKE 804



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 5/246 (2%)

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
           ++ P+I  YN+L+ S     + +    +  +MV  R  P A ++N +I  LC  G ++  
Sbjct: 107 EKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDA 166

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            +  D+M  R C+PNE T+  L    C  G   +   ++  +           Y  +I+S
Sbjct: 167 RELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISS 226

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM---EEYDY 478
            C++GKT+ A +L+ +M + G  P   T++S I  LC  G I EA  IF  M   EE   
Sbjct: 227 FCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGL 286

Query: 479 -KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             P+V  +  +L+G CK    + +  +   M       N  +Y I + G+    +L  + 
Sbjct: 287 PHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAW 346

Query: 538 EVLKEL 543
            VLKE+
Sbjct: 347 IVLKEM 352


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 206/426 (48%), Gaps = 6/426 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDASS 135
           H+ +  F  L     KG   + V    LL  L   NK+K A+ + + +V   I  P+   
Sbjct: 121 HRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVM 180

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  ++N LCKKG+   A  L+  ME      NT  Y+ ++   C  G L+ +   L+ + 
Sbjct: 181 YGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMK 240

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           QK + P+ FTYS L++A  K         L  ++I     PN+ ++N ++ GLCKEG+ E
Sbjct: 241 QKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVE 300

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A    R +  KG +P+V++YN+++    + G+ + A E+   M      P I++YNILI
Sbjct: 301 DAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILI 360

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
              A   K D A++V  E+ +   +PS  + N ++  L   G+        D+M      
Sbjct: 361 NGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHI 420

Query: 376 PNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           P+   Y    +L G    G V+EA +    L  ++  +  + Y  VI  LC+ GK  +A 
Sbjct: 421 PD--LYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAH 478

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
               ++   G  PD  TY+++I G C EGL++EA ++   ME+     D   +N ++ G 
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538

Query: 493 CKSRRT 498
            +S + 
Sbjct: 539 LRSNKV 544



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 217/472 (45%), Gaps = 10/472 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DAF    +MV     P VV  + LL  L         + +   +    I       + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 139 LVN--CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           +VN  CL  + ++G+++  +   +  G P N V +N+L+RGL     +  ++    +L++
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKK--GIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVR 170

Query: 197 KGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + +  PN   Y  ++    K+     A  LL  +     KPN   Y++++   CK+G  +
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLD 230

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A     ++  K   P++ +Y+ L+ +LC   +WE    L  EM   +  P + T+N +I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   GK + A +++  M++    P   +YN II      G+VD   +  D M ++  +
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350

Query: 376 PNEGTYNGLAMLCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           PN  +YN   ++ G     K+ EA  + + +  K           ++  L   G+T  A 
Sbjct: 351 PNIISYN--ILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
               EM   G  PD YT+ +L+ G    GL+EEA+  F  +E      ++  + A++ GL
Sbjct: 409 NFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           CK+ + D +   F+ +   G  P+  TYT ++ G   +  L+ + ++L++++
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 164/340 (48%), Gaps = 1/340 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  L+ A   L  M  K   PD+   + L+  LCK ++ +    +   M+   I 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  ++  +++ LCK+G V  A +++  M + G   + +TYN ++ G  + G ++++ + 
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I K + PN  +Y+ L+    +++ +  AM++  +I  KG KP++V+ NVLL GL +
Sbjct: 341 FDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GRT+ A  FF ++ S G  P++ ++  LL      G  EEA     +++       I  
Sbjct: 401 LGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  +I  L  +GK D A    +++      P   +Y  +I+  C EG +D     L +M 
Sbjct: 461 YTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
              C  +  TYN +        KV E  A ++ +  K  S
Sbjct: 521 DNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFS 560



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 176/375 (46%), Gaps = 3/375 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  L  M     KP+    + ++   CK   +  A  ++  M    I PD  +Y+ L++
Sbjct: 197 AFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK         L  +M       N  T+NS++ GLC  G +  + + +  +I+KG+ P
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP 316

Query: 202 NAFTYSFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           +  TY+ +++  Y  RG V  A ++ D +I K  +PN++SYN+L+ G  ++ + +EA++ 
Sbjct: 317 DVITYNMIIDG-YGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQV 375

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            R++  KG +P++V+ N+LL  L   GR + A     EM      P + T+  L+G    
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           +G  + A+    ++ + R   +   Y  +I  LC  GK+D      +++      P+  T
Sbjct: 436 NGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVIT 495

Query: 381 YNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  + +  C  G + EA  +++ + +    +    Y  ++    R  K  +    L E+ 
Sbjct: 496 YTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIA 555

Query: 440 KYGFTPDSYTYSSLI 454
              F+ ++ T   L+
Sbjct: 556 GKSFSFEAATVELLM 570



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 129/271 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ DA   +  M+ KG  PDV+    ++       ++ +A ++ + M++  I P+  
Sbjct: 295 KEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNII 354

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+N   ++  +  AMQ+  ++   G   + VT N L+ GL  LG    +  F D +
Sbjct: 355 SYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEM 414

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G +P+ +T+  LL   +K   V  AM     +  +    N+  Y  ++ GLCK G+ 
Sbjct: 415 LSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKL 474

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A   F  LP  G  P+V++Y  ++   C EG  +EA ++L +M+         TYN++
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVI 534

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +       K       L+E+    F   AA+
Sbjct: 535 VRGFLRSNKVSEMKAFLEEIAGKSFSFEAAT 565



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 96/206 (46%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+++A      +  KG KP +V    LL+ L +  + K A    + M+S+G IPD  
Sbjct: 365 RQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLY 424

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+    K G V  AM    K+E     TN   Y +++ GLC  G L+++    ++L
Sbjct: 425 THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKL 484

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GL P+  TY+ ++    +E  +  A  +L  +   G   +  +YNV++ G  +  + 
Sbjct: 485 PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKV 544

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILL 280
            E   F  ++  K F     +  +L+
Sbjct: 545 SEMKAFLEEIAGKSFSFEAATVELLM 570


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 232/475 (48%), Gaps = 16/475 (3%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF     M+     P++     L+  L K  +   A K+ + M   GI P+  +YT L++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LC++G+   A +L  +M+  G   ++V +N+L+ G C LG + ++ + L    + G V 
Sbjct: 242 GLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
               YS L++  ++ R    A +L  +++ +  KP+++ Y +L+ GL K G+ E+A++  
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLL 361

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           R +PSKG  P+   YN ++++LC  G  EE   L  EM   +  P   T+ ILI S+  +
Sbjct: 362 RSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM--------FHRR 373
           G    A ++  E+ K    PS A++N +I  LC  G++      L +M        F R 
Sbjct: 422 GLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
                 +++ +      G + +A+  +    +  NS     Y  +I   CR+G    A +
Sbjct: 482 AHSGNRSFDTMVQ---SGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALK 538

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  +   G +PDS TY++LI GL   G  EEA ++F   +++ + P V  + +L+   C
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSC 596

Query: 494 KSRRTDLSLEVFQMMIEK-GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           + R+  ++  ++   ++K   + +ET   I  E    + E E +   L EL  R+
Sbjct: 597 RRRKLLVAFNLWMKYLKKISCLDDETANEI--EQCFKEGETERALRRLIELDTRK 649



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 212/498 (42%), Gaps = 61/498 (12%)

Query: 53  SPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMV----------SKGHKPDVVQAT 102
           SP+D+       K   N       + L D F +L RMV            G    +   +
Sbjct: 248 SPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYS 307

Query: 103 NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           +L+  L +A +  +A ++   M+   I PD   YT L+  L K G +  A++L+  M   
Sbjct: 308 SLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSK 367

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   +T  YN++++ LC  G L +       + +    P+A T++ L+ +  +   V  A
Sbjct: 368 GITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKA 427

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA------------------------- 257
            ++  +I   G  P++ ++N L+ GLCK G  +EA                         
Sbjct: 428 EEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNR 487

Query: 258 -----------IRFFRDLP---SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
                      ++ +++L      G  P++VSYN+L+   C EG  + A +LL  +    
Sbjct: 488 SFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKG 547

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
            SP  VTYN LI  L   G+ + A K+     K  FR S A Y  ++   C   K+ +  
Sbjct: 548 LSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRRRKLLVAF 605

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
               +   +    ++ T N +      G+ + A   +  L  +++      Y   +  LC
Sbjct: 606 NLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLC 665

Query: 424 RKGKTYQA---FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK- 479
           + G+ ++A   F +L E  K   TP S     LI GLC    ++ A+++F+   + ++K 
Sbjct: 666 QSGRFHEALMVFSVLRE-KKILVTPPSCV--KLIHGLCKREQLDAAIDVFLYTLDNNFKL 722

Query: 480 -PDVDNFNALLLGLCKSR 496
            P V N+  LL  L +SR
Sbjct: 723 MPRVCNY--LLSSLLQSR 738



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 176/370 (47%), Gaps = 14/370 (3%)

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           Q L+ L   G+  +++ +  L+ A  K      A++    +     +P++ +YNV+L  +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIM 172

Query: 249 CKEGRT-EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            +E      A   + ++      PN+ ++ IL+  L  +GR  +A ++  +M G   SP 
Sbjct: 173 MREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            VTY ILI  L   G  + A K+  EM      P + ++N ++   C  G++    + L 
Sbjct: 233 RVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELL- 291

Query: 368 QMFHRRCKPNEGTYNGL----AMLCGVGKVQEAFAIIQSLGN--KQNSSPQE-FYKYVIT 420
           ++F +     +G   GL    +++ G+ + +      +   N  K+N  P    Y  +I 
Sbjct: 292 RLFEK-----DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQ 346

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L + GK   A +LL  M   G TPD+Y Y+++I+ LC  GL+EE   + + M E +  P
Sbjct: 347 GLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D      L+  +C++     + E+F  + + G  P+  T+  L++G+    EL+ +  +L
Sbjct: 407 DACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466

Query: 541 KELQLRQVVS 550
            ++++ +  S
Sbjct: 467 HKMEVGRPAS 476



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 153/318 (48%), Gaps = 4/318 (1%)

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
            +S N++ + + +E   +   RFF     +    +  S+ +++  L  +   +   + L 
Sbjct: 57  FLSKNIITSVIKEEVNRQLGFRFFIWASRRERLRSGESFGLVIDMLSEDNGCDLYWQTLE 116

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           E+  G  S     + +LI + A  G  + A++    M +   RP   +YN I+  +  E 
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMRED 176

Query: 358 KV-DLVVKCLDQMFHRRCKPNEGTYNGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
               L     ++M    C PN  T+ G+ M  L   G+  +A  +   +  +  S  +  
Sbjct: 177 VFFMLAFAVYNEMLKCNCSPNLYTF-GILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVT 235

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I+ LC++G    A +L YEM   G  PDS  +++L+ G C  G + EA E+  + E
Sbjct: 236 YTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFE 295

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +  +   +  +++L+ GL ++RR   + E++  M+++   P+   YTIL++G++   ++E
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIE 355

Query: 535 LSAEVLKELQLRQVVSES 552
            + ++L+ +  + +  ++
Sbjct: 356 DALKLLRSMPSKGITPDT 373


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 213/453 (47%), Gaps = 38/453 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DAFL L       H+P       LL  L  A ++  A K     +   + PD  ++  ++
Sbjct: 140 DAFL-LAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVI 198

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM---LGNLNQSLQFLDRLIQK 197
           + LC+ G +  A  + + ++ +G   +  TYNSL+ G C     GN+      L  +++ 
Sbjct: 199 SGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEA 258

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P A T+  L+    K     AA+++ +++  +G   ++V+YN L++GLC EG+ EE 
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++   ++   G  PN +++  +L+  C +G   +AN+ +  M   +  P +V YNILI  
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDV 378

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK + A+ V + M K    P+  +YN +I      G        LD+M  +  + +
Sbjct: 379 YRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  I +LC KG+  +A +LL E
Sbjct: 439 VVTYNVL----------------------------------IGALCCKGEVRKAVKLLDE 464

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M++ G  P+  TY+++I+G C +G I+ A EI   ME+   + +V  +N  +   C+  +
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            D + ++   M++K  +PN  TY  + EG+  +
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 177/358 (49%), Gaps = 20/358 (5%)

Query: 93  GHKPDVVQATNLLYDLCK---ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           G  P V    +L+   CK   A  M     +++ MV +GI P A ++  L+N  CK  N 
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             A+++ E+M+  G   + VTYNSL+ GLC  G + + ++ ++ +   GL PN  T+  +
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           L+   K+  +  A   +D +  +  +P++V YN+L+    + G+ E+A+     +  KG 
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGI 400

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            PNV +YN L+      G W  A+ LL EM        +VTYN+LIG+L   G+   A+K
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLC 388
           +LDEM +    P+  +YN II   C +G +    +   +M   R + N  TYN  +   C
Sbjct: 461 LLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFC 520

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            +GK+ EA  ++  + +K               L   G TY+  +    M + G+TPD
Sbjct: 521 QIGKMDEANDLLNEMLDK--------------CLVPNGITYETIK--EGMMEKGYTPD 562



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 4/348 (1%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  + + LL      + V  A K     + +   P++ ++N +++GLC+ G+  +A   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEG---RWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +D+ + G  P+V +YN L+   C +G        + LL EM     SPT VT+ +LI  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +  T  A++V +EM +     S  +YN +I+ LCSEGKV+  VK +++M      PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           E T+   L   C  G + +A   I  +  +        Y  +I    R GK   A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M K G +P+  TY+ LI G    G    A  +   M+E   + DV  +N L+  LC   
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               ++++   M E G  PN  TY  +++G   +  ++ + E+   ++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 146/320 (45%), Gaps = 42/320 (13%)

Query: 65  KPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM 124
           K G   +  H D       + L+ MV  G  P  V    L+   CK +    A++V E M
Sbjct: 238 KKGGAGNMYHVD-------MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM 290

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC----- 179
              GI     +Y  L++ LC +G V   ++L+E+MED G   N +T+  +++G C     
Sbjct: 291 KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMM 350

Query: 180 ------------------------------MLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
                                          LG +  ++   + + +KG+ PN  TY+ L
Sbjct: 351 ADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCL 410

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           +    +     +A  LLD++  KG + ++V+YNVL+  LC +G   +A++   ++   G 
Sbjct: 411 ITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           EPN ++YN +++  C +G  + A E+   M+   +   +VTYN+ I      GK D A  
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAND 530

Query: 330 VLDEMVKGRFRPSAASYNPI 349
           +L+EM+     P+  +Y  I
Sbjct: 531 LLNEMLDKCLVPNGITYETI 550



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 178/381 (46%), Gaps = 4/381 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +T + N+L+ GL     ++ + +     +++ + P+ +T++ ++    +   +  A  + 
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR---FFRDLPSKGFEPNVVSYNILLRSL 283
            DI A G  P++ +YN L+ G CK+G            +++   G  P  V++ +L+   
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C       A  +  EM     + ++VTYN LI  L   GK +  +K+++EM      P+ 
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
            ++  ++   C +G +      +D M  R  +P+   YN L  +   +GK+++A A+ ++
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  K  S     Y  +IT   R G    A  LL EM + G   D  TY+ LI  LC +G 
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           + +A+++   M E   +P+   +N ++ G C       + E+   M +  +  N  TY +
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 523 LVEGIAHQDELELSAEVLKEL 543
            ++      +++ + ++L E+
Sbjct: 515 FIKYFCQIGKMDEANDLLNEM 535



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 43/331 (12%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P+  S N LL GL    R + A + FR    +   P++ ++N ++  LC  G+  +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTD---HALKVLDEMVKGRFRPSAASYNPIIA 351
           +  ++     +P++ TYN LI      G      H   +L EMV+    P+A ++  +I 
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
             C        V+  ++M  +    +  TYN L                           
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL--------------------------- 305

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
                  I+ LC +GK  +  +L+ EM   G +P+  T+  +++G C +G++ +A +   
Sbjct: 306 -------ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M E + +PDV  +N L+    +  + + ++ V + M +KG  PN TTY  L+ G +   
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           +   ++ +L E++      E  +E  V+ Y+
Sbjct: 419 DWRSASGLLDEMK------EKGIEADVVTYN 443



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 116/249 (46%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + K+ +    +E M   G  P+ +    +L   CK   M  A   ++ M    + PD   
Sbjct: 312 EGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVI 371

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L++   + G +  AM + E M   G   N  TYN L+ G    G+   +   LD + 
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +KG+  +  TY+ L+ A   +  V  A+KLLD++   G +PN ++YN ++ G C +G  +
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A      +       NVV+YN+ ++  C  G+ +EAN+LL EM      P  +TY  + 
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIK 551

Query: 316 GSLAYHGKT 324
             +   G T
Sbjct: 552 EGMMEKGYT 560



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 93/186 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K+ DA    E M  KG  P+V     L+    ++   + A  +++ M   GI 
Sbjct: 377 DVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L+  LC KG V  A++L+++M + G   N +TYN++++G C  GN+  + + 
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ +     N  TY+  ++   +   +  A  LL++++ K   PN ++Y  +  G+ +
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556

Query: 251 EGRTEE 256
           +G T +
Sbjct: 557 KGYTPD 562


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 241/495 (48%), Gaps = 47/495 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ +AF    +MV +G   D+V  T ++  L K  K K+A +V E ++   + P+  
Sbjct: 403 KSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCV 462

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++  CK G +  A  +++KME    P N +T++S++ G    G L++++  L  +
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522

Query: 195 IQKGLVPNAFTYSFLLEAAYK--ERGV--------------------------------- 219
           +Q+ ++PN   Y+ L++  +K  E+ V                                 
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A  L+ D+ +KG  P++V+Y  L+ G  KEG    A+   +++  K    +VV+YN L
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           ++ L   G+++    + + M     +P  +TYN +I +    GKT+ AL +L+EM     
Sbjct: 643 IKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAI 399
            P+A +YN +I  LC  G V+     LD+M      P   T+  L       + ++A  I
Sbjct: 702 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVK--AYSRSEKADKI 759

Query: 400 IQSLGNKQNSSPQEF----YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           +Q +  K  +S  E     Y  +IT  CR G T +A  +L EM K G + D  TY++LIR
Sbjct: 760 LQ-IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIR 818

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS----RRTDLSLEVFQMMIEK 511
           G C    +E+AL+ +  M      P++  +N LL GL  +       + + ++   M E+
Sbjct: 819 GYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNER 878

Query: 512 GQMPNETTYTILVEG 526
           G +PN  TY ILV G
Sbjct: 879 GLVPNAATYDILVSG 893



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 120/516 (23%), Positives = 234/516 (45%), Gaps = 42/516 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+  A L L++M  +   P+V+  ++++    K   + KA+ V+  MV   ++P+   Y 
Sbjct: 476 KMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYA 535

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++   K G    A    ++M+      + V ++ L+  L  +G ++++   +  +  K
Sbjct: 536 ILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSK 595

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL--------- 248
           G+ P+   Y+ L++  +KE    AA+ ++ ++  K  + ++V+YN L+ GL         
Sbjct: 596 GIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPR 655

Query: 249 -------------------------CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                                    C +G+TE+A+    ++ S G  PN V+YNIL+  L
Sbjct: 656 YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGL 715

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G  E+A   L EM   +  PT +T+  L+ + +   K D  L++ +++V      S 
Sbjct: 716 CKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSL 775

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
             YN +I   C  G        LD+M  R    +  TYN L    C    V++A      
Sbjct: 776 TVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQ 835

Query: 403 LGNKQNSSPQEFYKYVITSLCRKG----KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +     +     Y  ++  L   G       +  +L+ EM + G  P++ TY  L+ G  
Sbjct: 836 MFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYG 895

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G  ++ + + + M    + P +  +N L+    KS +   + E+   ++ KG++PN  
Sbjct: 896 RVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSF 955

Query: 519 TYTILVEG---IAHQDELELSAEVLKELQLRQVVSE 551
           TY IL  G   ++++ E++ S +   E+++++++ E
Sbjct: 956 TYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIE 991



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 224/488 (45%), Gaps = 15/488 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ND   Q E    K  +P +V  T L+   CK   ++++  + + M+ +GI+PD  + +
Sbjct: 304 KNNDVVTQNE---IKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCS 360

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++   C+ G +  A  L  +M + G   N V+Y +++  L   G + ++     +++ +
Sbjct: 361 SILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR 420

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+  +  T + +++  +K      A ++ + I+     PN V+Y+ LL G CK G+ E A
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELA 480

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + +  +   PNV++++ ++     +G   +A ++L EM   +  P  + Y ILI  
Sbjct: 481 ELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D A     EM   R   S   ++ ++  L   G++D     +  M+ +   P+
Sbjct: 541 YFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPD 600

Query: 378 EGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
              Y  L  + G    G    A +I+Q +  K        Y  +I  L R GK Y    +
Sbjct: 601 IVNYASL--IDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK-YDPRYV 657

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M + G  PD  TY+++I   C++G  E+AL+I   M+ Y   P+   +N L+ GLCK
Sbjct: 658 CSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 717

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           +   + +      M+    +P   T+  LV+  +  ++ +      K LQ+ + +  S +
Sbjct: 718 TGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKAD------KILQIHEKLVASGL 771

Query: 555 ERLVMQYD 562
           E  +  Y+
Sbjct: 772 ELSLTVYN 779



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 221/510 (43%), Gaps = 57/510 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSY 136
           + + A      M + G  P +     LLY    A+ +   +K+M   M+  G++PD  S 
Sbjct: 74  RFSTASATFSHMRALGLVPTLPFWNTLLYQF-NASGLVSQVKLMYSDMLFCGVVPDVFSV 132

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             LV+ LCK G++  A+  +   +      + VTYN+++ G C  G ++Q    L  +++
Sbjct: 133 NVLVHSLCKVGDLDLALGYLRNND--VVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVK 190

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +GL  ++ T + L++   +   V  A  ++ +++  G   +++  N L+ G C+ G   +
Sbjct: 191 RGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQ 250

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA----NELLAEMDGGDR-------- 304
           A     +      + ++V+YN LL++ C  G    A    NE+L      DR        
Sbjct: 251 ATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVT 310

Query: 305 -------SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
                   PT+VTY  LI +       + +  +  +M+     P   + + I+   C  G
Sbjct: 311 QNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHG 370

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           K+        +M+     PN  +Y                                    
Sbjct: 371 KLTEAAVLFREMYEMGLDPNHVSY----------------------------------AT 396

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I SL + G+  +AF L  +M   G + D  T ++++ GL   G  +EA E+F  + + +
Sbjct: 397 IINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN 456

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             P+   ++ALL G CK  + +L+  V Q M ++   PN  T++ ++ G A +  L  + 
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516

Query: 538 EVLKELQLRQVVSESAVERLVMQYDFEGIE 567
           +VL+E+  R V+  + V  +++   F+  E
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGYFKAGE 546



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/490 (21%), Positives = 200/490 (40%), Gaps = 53/490 (10%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           ++   A      M + G++P    +  L+      G V     +   M   G   +  + 
Sbjct: 73  DRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSV 132

Query: 172 NSLVRGLCMLGNL---------------------------------NQSLQFLDRLIQKG 198
           N LV  LC +G+L                                 +Q    L  ++++G
Sbjct: 133 NVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRG 192

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L  ++ T + L++   +   V  A  ++ +++  G   +++  N L+ G C+ G   +A 
Sbjct: 193 LCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQAT 252

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA----NELLAEMDGGDR---------- 304
               +      + ++V+YN LL++ C  G    A    NE+L      DR          
Sbjct: 253 ELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN 312

Query: 305 -----SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 PT+VTY  LI +       + +  +  +M+     P   + + I+   C  GK+
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKL 372

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
                   +M+     PN  +Y  +   L   G+V EAF +   +  +  S        V
Sbjct: 373 TEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTV 432

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           +  L + GKT +A ++   + K    P+  TYS+L+ G C  G +E A  +   ME+   
Sbjct: 433 MDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHV 492

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P+V  F++++ G  K      +++V + M+++  MPN   Y IL++G     E +++ +
Sbjct: 493 PPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADD 552

Query: 539 VLKELQLRQV 548
             KE++ R++
Sbjct: 553 FCKEMKSRRL 562



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 3/218 (1%)

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+R      R+  A+   + M      PT+  +N L+      G       +  +M+   
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
             P   S N ++  LC  G +DL +  L    +     +  TYN +    C  G V + F
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLVDQGF 182

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            ++  +  +           ++   CR G    A  ++Y +   G T D    ++LI G 
Sbjct: 183 GLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           C  GL+ +A E+       D K D+  +N LL   CK+
Sbjct: 243 CEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKT 280


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 225/470 (47%), Gaps = 12/470 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYL 139
           DAFL+L    ++G  P +   + L+  L    ++  A KV  EM     + PD  +YT +
Sbjct: 161 DAFLELS---ARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAM 217

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LC+ G +  A  ++ ++   G     VTYN L+  LC  G + ++ +   R+++  +
Sbjct: 218 IKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRV 277

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  T+  L+    + +       +L ++   G  PN V YN ++   C++G   EA++
Sbjct: 278 RPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALK 337

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F ++ SKG +  VV+YN++ ++LC EG  E A ++L EM     +  +V  ++    +A
Sbjct: 338 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEM---LLAGMMVHCSLFNSVVA 394

Query: 320 YH----GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           +H    G+ D  L+++ EM+    +P+ A     I  LC  GK +   +   Q+  +   
Sbjct: 395 WHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLG 454

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            N  T N L   LC    ++EA  +++++ N      +  Y  +I   C+  K  +A QL
Sbjct: 455 VNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQL 514

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M K GF PD +T++  +   C  G +EE L +   M+    KPD+  +  ++ G CK
Sbjct: 515 RDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCK 574

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++    + E    +++ G  PN   Y  L+ G      +  +  +L  ++
Sbjct: 575 AKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMK 624



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 229/489 (46%), Gaps = 12/489 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++ +AF    RMV    +P +V    L+  L +  +  +   V++ M   GI 
Sbjct: 254 DALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGIT 313

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  ++   C+KG+   A++L ++M   G     VTYN + + LC  G +  + + 
Sbjct: 314 PNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKI 373

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERG---VHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           LD ++  G++ +   ++ ++  A+  RG   +   ++L+ +++A+  KPN       +  
Sbjct: 374 LDEMLLAGMMVHCSLFNSVV--AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQE 431

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           LCK G+ EEA   +  +  KG   NV + N L+  LC     +EA ++L  M        
Sbjct: 432 LCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELD 491

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            +TYNI+I       K D A+++ D+M+K  F+P   ++N  +   C+ GKV+ ++  LD
Sbjct: 492 RITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLD 551

Query: 368 QMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
           QM     KP+  TY    +G      + K  E    +   G + N+     Y  +I    
Sbjct: 552 QMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAV---IYNALIGGYG 608

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R G    A  +L  M   G  P   TY+SL+  +C  GL+EE   +F      D +  V 
Sbjct: 609 RNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVI 668

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +  ++ G CK  + D ++  F+ M  +G  PN+ TYT L+   +     E ++++  E+
Sbjct: 669 GYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEM 728

Query: 544 QLRQVVSES 552
               +V +S
Sbjct: 729 VSLGIVPDS 737



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 210/455 (46%), Gaps = 2/455 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R    ++A    + MVSKG K  VV    +   LCK  +M+ A K+++ M+ +G++   S
Sbjct: 328 RKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCS 387

Query: 135 SYTYLVNC-LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +  +V   L   G +   ++L+ +M       N     + ++ LC  G   ++ +   +
Sbjct: 388 LFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQ 447

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++ KGL  N  T + L+    +   +  A K+L  ++  G + + ++YN+++ G CK  +
Sbjct: 448 VLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASK 507

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EAI+   D+  +GF+P++ ++NI L + C  G+ EE   LL +M      P IVTY  
Sbjct: 508 MDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGT 567

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I           A + L E++K   RP+A  YN +I      G +   +  LD M +  
Sbjct: 568 IIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNG 627

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            +P   TYN L   +C  G V+E  A+      K        Y  +I   C+ GK  +A 
Sbjct: 628 IQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAV 687

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
               EM   G  P+  TY++L+      G  EEA ++F  M      PD  ++N L+ G 
Sbjct: 688 MYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           C+    D  +E    M  +    +  +Y   V+GI
Sbjct: 748 CEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 191/435 (43%), Gaps = 38/435 (8%)

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ-KGLVPNAFT 205
           G++  A     ++   G   +  T + LV  L   G L+ + +    +   K + P+  T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++A  +   + AA  +L ++   G +P +V+YNVL+  LCK GR EEA R    + 
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
                P++V++ IL+  L    ++ E   +L EM G   +P  V YN +IG     G   
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSE----------------------------- 356
            ALK+ DEMV    + +  +YN I   LC E                             
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 357 -------GKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQN 408
                  G++DLV++ + +M  R  KPN+      +  LC  GK +EA  I   +  K  
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                    +I  LC+     +A ++L  M   G   D  TY+ +I+G C    ++EA++
Sbjct: 454 GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   M +  +KPD+  FN  L   C   + +  L +   M  +G  P+  TY  +++G  
Sbjct: 514 LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573

Query: 529 HQDELELSAEVLKEL 543
              ++  + E L EL
Sbjct: 574 KAKDMHKANEYLTEL 588



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 35/280 (12%)

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAAS 345
           G    A +   E+     SP+I T +IL+ +L   G+ D A KV  EM  G+   P   +
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGN 405
           Y  +I                                    LC  G++  AFA++  L  
Sbjct: 214 YTAMIK----------------------------------ALCRAGEIDAAFAMLAELRR 239

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                    Y  ++ +LC+ G+  +AF+L   M +    P   T+  LI GL       E
Sbjct: 240 SGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGE 299

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
              +   M+ +   P+   +N ++   C+      +L++F  M+ KG      TY ++ +
Sbjct: 300 VGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAK 359

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
            +  + E+E + ++L E+ L  ++   ++   V+ +   G
Sbjct: 360 ALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRG 399



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 8/188 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  ++DA   L+ M   G +P  V   +L+Y +C A  +++   V    +   I     
Sbjct: 609 RNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVI 668

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT ++   CK G +  A+   ++M   G P N +TY +L+      GN  ++ +  D +
Sbjct: 669 GYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEM 728

Query: 195 IQKGLVPNAFTYSFLL----EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +  G+VP++ +Y+ L+    E    ++ V +  ++   ++ + G     SYN  + G+  
Sbjct: 729 VSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDG----CSYNAFVDGITT 784

Query: 251 EGRTEEAI 258
               +EA+
Sbjct: 785 PWCQKEAV 792


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 231/484 (47%), Gaps = 30/484 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ AF  L+ M  +G K DV+  + L+  LC+  ++ +A++  + M      P+  +Y 
Sbjct: 14  QVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYN 72

Query: 138 YLVNCLCKKGNVGYAMQLVEKME-----DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
            +VN LCK   +   ++L + ME      +G   + ++Y++++  LC    ++++ ++  
Sbjct: 73  TVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 132

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R+   G  PN  TYS L++   K   V  A  LL  +  +   P  + YN ++ G  ++G
Sbjct: 133 RMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQG 192

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           +  E +     +  KGF  N++ +N +L +L      E+A +    +    + P +VTYN
Sbjct: 193 KPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYN 252

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           + +  L   GK D A ++L EMV+ +  P   +Y+ II   C  G++D       +M   
Sbjct: 253 VAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVH 312

Query: 373 RCKPNEGTYNGLAMLCGVG---KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            C P+  T+  + +L G     K +EAF + + + N       + Y  ++  +C      
Sbjct: 313 ECIPHPVTF--MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 370

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP--------- 480
            A ++ ++M +    PD+ TY+ LI+ LC    ++EA E   VME  +  P         
Sbjct: 371 SALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 430

Query: 481 -------DVDNFNALL---LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
                  +VD   ++L   + +CK+   D ++EV + M+ KG  P+E TY  ++  +   
Sbjct: 431 EVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGL 490

Query: 531 DELE 534
           D ++
Sbjct: 491 DRVD 494



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 219/445 (49%), Gaps = 7/445 (1%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           T ++   CKA ++ +A ++++ M   G+  D   ++ L+  LC+KG +  A++  + M +
Sbjct: 3   TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE 62

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK-----GLVPNAFTYSFLLEAAYKE 216
              P N +TYN++V GLC    +++ L+  D + ++     G  P+  +YS +++A  K 
Sbjct: 63  ECSP-NVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
           + V  A +    + A G  PN+V+Y+ L+ GLCK  R +EA      L  +   P  + Y
Sbjct: 122 QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYY 181

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N ++     +G+  E  ELL  M        I+ +N ++ +L  + + + A +  + ++K
Sbjct: 182 NAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 241

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQE 395
              +P+  +YN  +  LC  GKVD   + L +M   +  P+  TY+ +    C  G++ +
Sbjct: 242 SGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 301

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  +   +   +       +  ++       K+ +AF++  +M   GF P   TY+ L+ 
Sbjct: 302 ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 361

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
            +C    +E ALEI+  M+    +PD + +  L+  LC++RR D + E   +M     +P
Sbjct: 362 CVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 421

Query: 516 NETTYTILVEGIAHQDELELSAEVL 540
           N      LVE +  Q E++ +  VL
Sbjct: 422 NGAICHALVEVLCKQGEVDEACSVL 446



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 214/453 (47%), Gaps = 20/453 (4%)

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVG 150
           S G +PDV+  + ++  LCKA ++ KA +  + M + G  P+  +Y+ L++ LCK   V 
Sbjct: 101 SHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVD 160

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
            A  L+ +++        + YN++V G    G  ++ L+ L  + +KG   N   ++ +L
Sbjct: 161 EAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAML 220

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
            A +K      A +  + ++  G KPN+V+YNV + GLCK G+ +EA R   ++      
Sbjct: 221 HALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVT 280

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P+V++Y+ ++   C  GR ++A+++   M   +  P  VT+  L+   + H K+  A +V
Sbjct: 281 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 340

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCG 389
            ++MV   F P   +YN ++  +C    V+  ++   +M  ++ +P+  TY  L   LC 
Sbjct: 341 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCR 400

Query: 390 VGKVQEA-------------------FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             +V EA                    A+++ L  +            +  +C+ G+  +
Sbjct: 401 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDE 460

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +++ +M   G  PD  TY +++R LC    ++ A+  F  M      P +  +  L+ 
Sbjct: 461 AVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIG 520

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
             C +   D +  +F+ M+  G  P   T   L
Sbjct: 521 EACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 206/417 (49%), Gaps = 40/417 (9%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT ++N  CK G V  A +L+++M++ G   + + +++L++GLC  G ++++L+    + 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI-----IAKGGKPNLVSYNVLLTGLCK 250
           ++   PN  TY+ ++    K   +   ++L DD+      + G +P+++SY+ ++  LCK
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R ++A  +F+ + + G  PNVV+Y+ L+  LC   R +EA  LL ++ G D  P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN ++      GK    L++L  M +  F  +   +N ++  L    + +   +  +++ 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
               KPN  TYN                                    +  LC+ GK  +
Sbjct: 241 KSGKKPNVVTYN----------------------------------VAVHGLCKAGKVDE 266

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A+++L EM +   TPD  TYSS+I G C  G +++A ++F  M  ++  P    F  LL 
Sbjct: 267 AYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLH 326

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           G  + +++  +  V + M+  G +P   TY +L++ +   D +E + E+  +++ ++
Sbjct: 327 GFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 383



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 158/316 (50%), Gaps = 9/316 (2%)

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y  ++ G CK G+ ++A     ++  +G + +V+ ++ L++ LC +GR +EA E    M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR------PSAASYNPIIARLC 354
           G + SP ++TYN ++  L    + D  L++ D+M K R+       P   SY+ +I  LC
Sbjct: 61  GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEK-RYEASHGCEPDVISYSTVIDALC 119

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
              +VD   +   +M    C PN  TY+ L   LC V +V EA++++  L  +       
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
           +Y  V+    R+GK  +  +LL  M + GF  +   +++++  L      E+A + F  +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            +   KP+V  +N  + GLCK+ + D +  +   M+E    P+  TY+ +++G      +
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 534 ELSAEVLKELQLRQVV 549
           + + +V   + + + +
Sbjct: 300 DKADDVFTRMMVHECI 315



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 19/290 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K +D F    RM+     P  V    LL+   +  K ++A +V E MV++G IP   
Sbjct: 298 RMDKADDVFT---RMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++C+C   +V  A+++  KM+      +  TY  L++ LC    ++++ +FLD +
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVM 414

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               +VPN      L+E   K+  V  A  +LD+++                 +CK G  
Sbjct: 415 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEP 458

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+     +  KG  P+  +Y  +LRSLC   R + A     +M     +P +VTY +L
Sbjct: 459 DEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLL 518

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           IG        D A ++ + MV   F P A +   + + L   G  DL+V+
Sbjct: 519 IGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLLVR 568



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 147/365 (40%), Gaps = 54/365 (14%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K ++    L  M  KG   +++    +L+ L K ++ +KA +  E ++ SG  P+  
Sbjct: 190 RQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVV 249

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y   V+ LCK G V  A +++ +M +     + +TY+S++ G C  G ++++     R+
Sbjct: 250 TYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 309

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +    +P+  T+  LL    + +    A ++ +D++  G  P L +YNVL+  +C     
Sbjct: 310 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 369

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A+  +  +  K  +P+  +Y  L++ LC   R +EA E L  M+  +  P     + L
Sbjct: 370 ESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHAL 429

Query: 315 IGSLAYHGKTDHALKVLD-------------------EMVKGRFRPSAASYNPI------ 349
           +  L   G+ D A  VLD                   +MV    RP  A+Y  +      
Sbjct: 430 VEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCG 489

Query: 350 -----------------------------IARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
                                        I   CS    D   +  + M      P   T
Sbjct: 490 LDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQT 549

Query: 381 YNGLA 385
              L+
Sbjct: 550 MRTLS 554


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 226/475 (47%), Gaps = 19/475 (4%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM+     P+V   + L+  LCK+  +K A+ + + M   GI+PDA +Y  +++ LC+  
Sbjct: 186 RMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSK 245

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A +L +KM+D G   + VT N+L+ G CML  ++++   L    + G V +   YS
Sbjct: 246 RVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYS 305

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+   ++ +       L   +I    KP++  Y +++ GL + G+  +A+    ++   
Sbjct: 306 CLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTES 365

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+ V YN+L++  C  G   EA  L  E+   D  P + TY+ILI  +  +G T  A
Sbjct: 366 GVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDA 425

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM--------FHRRCKPNEG 379
            ++ +EM K    PSA ++N +I  LC  G+++       +M        F R  +    
Sbjct: 426 QEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSH 485

Query: 380 TYNGLAM------LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +  ++      LC  G + +A+ I+  L +  ++     Y  ++   C+ G    A++
Sbjct: 486 VLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYK 545

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM   G +PD+ TY +LI GL      E+A ++F  ME+    PD   +  ++  +C
Sbjct: 546 LFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMC 605

Query: 494 KSRRTDLSLEVFQMMIE--KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             RR +L    F + ++  +     E      +EG   + E+E +   L E+  +
Sbjct: 606 --RRMELP-RAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFK 657



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 214/464 (46%), Gaps = 22/464 (4%)

Query: 116 KAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
           KA++    M      PD  +Y  +++ L +K  +  A+ +  +M       N  T++ L+
Sbjct: 144 KAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILI 203

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
            GLC  GN+  +L   D + Q+G++P+AFTY  ++    + + V  A +L D +   G  
Sbjct: 204 DGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVG 263

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P+ V+ N LL G C   R +EA    R     G+  +V  Y+ L+R L    R+E+   L
Sbjct: 264 PDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLL 323

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             +M   +  P +  Y I++  LA  GK   AL++L+EM +    P    YN +I   C 
Sbjct: 324 YRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCD 383

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVG---KVQEAFAIIQSLGNKQNSSP 411
            G +        ++    C PN  TY+ L + +C  G     QE F  ++ LG   ++  
Sbjct: 384 MGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVT 443

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP--------------DSYTYSSLIRGL 457
              +  +I  LC+ G+  +A  L Y+M + G  P              DS +   ++  L
Sbjct: 444 ---FNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQL 499

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
           C  GLI +A  I + + +    P +  +N L+ G CK    + + ++F+ M  KG  P+ 
Sbjct: 500 CDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDT 559

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
            TY  L+ G+      E + +V  +++      ++AV R +M +
Sbjct: 560 VTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTW 603



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 206/491 (41%), Gaps = 54/491 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM----------- 123
           R  +++DA+   ++M   G  PD V    LL   C  +++ +A  ++ +           
Sbjct: 243 RSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVR 302

Query: 124 ------------------------MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM 159
                                   M+   + PD   YT ++  L + G V  A++L+ +M
Sbjct: 303 GYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEM 362

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
            + G   +TV YN L++G C +G L+++      + +    PN  TYS L+    +    
Sbjct: 363 TESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLT 422

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV------ 273
             A ++ +++   G  P+ V++N L+ GLCK G+ E+A   F  +   G  P++      
Sbjct: 423 RDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRLSQ 481

Query: 274 --------VSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKT 324
                    S   ++  LC  G   +A  +L ++ D GD +P I TYNIL+      G  
Sbjct: 482 GPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGD-APGIYTYNILVNGFCKLGNF 540

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG- 383
           + A K+  EM      P   +Y  +I  L    + +   K  DQM    C P+   Y   
Sbjct: 541 NGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTM 600

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           +  +C   ++  AF++         S   E  K  I     K +  +A + L EM     
Sbjct: 601 MTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIK-AIEGYFEKQEVEKAVRGLLEMDFKLN 659

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D   Y+  + GLC    + EAL+IF+++EEY           L+  L K    D +++
Sbjct: 660 DFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAID 719

Query: 504 VFQMMIEKGQM 514
           VF   IEKG +
Sbjct: 720 VFLYTIEKGYL 730



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 61/120 (50%)

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           Q L  +   G    +  +  LI+     GL ++A+E F  M ++D  PDV  +N +L  L
Sbjct: 112 QTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVL 171

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            +     L+L V+  M++   +PN  T++IL++G+     ++ +  +  E+  R ++ ++
Sbjct: 172 IQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDA 231


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 217/465 (46%), Gaps = 6/465 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R++ +    L    M   G +P+V     L+  LC+ +++  A K+++ M + G  
Sbjct: 142 DALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCP 201

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  +V+ LC  G V  A +++        P    +YN+++  LC    + +    
Sbjct: 202 PDDVTYGTIVSALCTLGRVDEATEVLSAA-----PPVAASYNAVILALCREFRMQEVFAV 256

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +  ++ +GL PN  TY+ ++ A  K   +  A  +L  ++  G  PN+ ++  L+ GL  
Sbjct: 257 VGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFN 316

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +GR  +A+  ++ + ++G+ P+ VSYN+L+R LC  G  + A+ +L +M+     P   T
Sbjct: 317 DGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNART 376

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI   +  G  D A+ + ++M +   +P+   Y  ++   C +   +     +D+M 
Sbjct: 377 YSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKML 436

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C PN  T+N L   LC   +V  A  +   +           Y  ++  L R+G   
Sbjct: 437 VENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCG 496

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A Q++ EM  +G      TY++++ GLC   +  EA+     M     +PD   F A++
Sbjct: 497 DALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAII 556

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
              CK     ++  +   M       N   YTIL+  + +QD+LE
Sbjct: 557 HAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLE 601



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 210/456 (46%), Gaps = 10/456 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++H++  A   L+ M +KG  PD V    ++  LC   ++ +A +V+     S   P A+
Sbjct: 181 QNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVL-----SAAPPVAA 235

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  ++  LC++  +     +V  M   G   N +TY ++V   C  G L  +   L R+
Sbjct: 236 SYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARM 295

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  PN  T++ L+   + +  VH A+ +   ++A+G  P+ VSYNVL+ GLC  G  
Sbjct: 296 VITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDL 355

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A     D+   G  PN  +Y+ L+      G  + A  +  +M      P +V Y  +
Sbjct: 356 KGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNM 415

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +G        + A  ++D+M+     P+  ++N +I  LC+  +V   +    +M    C
Sbjct: 416 VGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGC 475

Query: 375 KPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            PN  TYN L  L G+   G   +A  ++  + N         Y  V++ LC+     +A
Sbjct: 476 PPNGRTYNEL--LHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREA 533

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
              +  M   G  PD++T++++I   C EG +  A  I   M   +   ++  +  L+  
Sbjct: 534 MFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAE 593

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           LC   + + ++     M+ +G  PN  T+ +LV G+
Sbjct: 594 LCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 171/409 (41%), Gaps = 39/409 (9%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y +L++ L ++  VG    +   M   G   N  TYN LVR LC    +  + + LD + 
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            KG  P+  TY  ++ A      V  A ++L         P   SYN ++  LC+E R +
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEATEVL-----SAAPPVAASYNAVILALCREFRMQ 251

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           E      D+  +G +PNV++Y  ++ + C  G    A  +LA M     +P + T+  L+
Sbjct: 252 EVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALV 311

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           G L   G+   AL +   MV   + PS  SYN +I  LCS G +      L+ M    C 
Sbjct: 312 GGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCF 371

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           PN  T                                  Y  +I    + G    A  + 
Sbjct: 372 PNART----------------------------------YSTLIDGFSKAGDLDGAISIW 397

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +MT+ G  P+   Y++++   C + +  +A  +   M   +  P+   FN L+  LC  
Sbjct: 398 NDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNC 457

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           RR   +L VF  M   G  PN  TY  L+ G+  +     + +++ E+Q
Sbjct: 458 RRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQ 506



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 72/146 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+    DA   +  M + G +  +V    ++  LC+    ++A+  +  M+  GI PDA 
Sbjct: 491 REGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAF 550

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T +++  CK+G V  A  ++  M       N + Y  L+  LC    L  ++ +L ++
Sbjct: 551 TFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKM 610

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVH 220
           + +G+ PN  T++ L+   ++  G +
Sbjct: 611 LYEGIYPNTVTWNVLVRGVFRNLGCN 636


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 209/435 (48%), Gaps = 8/435 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A+  L+ M      P+++    ++  LCKA K+++A K+ E     G  PD  +Y 
Sbjct: 269 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 328

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L KKG V  A +L EKM D G+  N V Y SL+R   + G      +    LI++
Sbjct: 329 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+    +  ++  +K   V     + +DI + G  P++ SY++L+ GL K G+  E 
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 448

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +  +GF  +  +YN ++   C  G+  +A E+L EM      PT+ TY  ++  
Sbjct: 449 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 508

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           LA   + D A  + +E        +   Y+ +I      G++D     L++M  +   PN
Sbjct: 509 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 568

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQL 434
             T+N L   L    ++ EA    QS+  K+   P   Y Y  +I  LCR  K  +AF  
Sbjct: 569 VYTWNSLLDALVKAEEINEALVCFQSM--KEMKCPPNTYTYSILINGLCRVQKYNKAFVF 626

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M K G  P+  TY+++I GL   G I +A  +F   +     PD  +FNAL+ G+  
Sbjct: 627 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 686

Query: 495 SRRTDLSLEVFQMMI 509
           + R   ++E +Q  +
Sbjct: 687 ANR---AMEAYQTTV 698



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 222/452 (49%), Gaps = 2/452 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA+  LER+  +G  P VV   ++L  L K  K+ +A+ + E+M      P++S+Y 
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYN 258

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC  G V  A +++++ME      N +T N +V  LC    L ++ +  +   Q+
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 318

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  TY  L++   K+  V  A +L + ++  G   N V Y  L+      GR E+ 
Sbjct: 319 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 378

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F++L  +G +P++   N  +  +   G  E+   +  ++      P + +Y+ILI  
Sbjct: 379 HKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 438

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+      +   M +  F   A +YN ++   C  GKV    + L++M  +  +P 
Sbjct: 439 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 498

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  +   L  + ++ EA+ + +   +K        Y  +I    + G+  +A+ +L 
Sbjct: 499 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 558

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G TP+ YT++SL+  L     I EAL  F  M+E    P+   ++ L+ GLC+ +
Sbjct: 559 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQ 618

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           + + +   +Q M ++G +PN  TYT ++ G+A
Sbjct: 619 KYNKAFVFWQDMQKQGLVPNVVTYTTMISGLA 650



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 224/464 (48%), Gaps = 2/464 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +M   G++  V   T L+  L +  ++  A+ +++ +  S + PD   Y   ++C  K
Sbjct: 68  LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 127

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GNV  A +   +++  G   + V+Y S++  LC  G L ++ +   ++  +  VP A+ 
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 187

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++           A KLL+ +  +G  P++VS+N +LT L K+ + +EA+  F ++ 
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVM 246

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            K  EPN  +YNI++  LC+ GR EEA  +L EM+     P ++T NI++  L    K +
Sbjct: 247 KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 306

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A K+ +   +    P   +Y  +I  L  +G+VD   +  ++M       N   Y  L 
Sbjct: 307 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 366

Query: 386 MLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
               + G+ ++   + + L  +            +  + + G+  +   +  ++  YGF 
Sbjct: 367 RNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 426

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  +YS LI GL   G   E   IF  M++  +  D   +NA++ G CKS +   + E+
Sbjct: 427 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI 486

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            + M EK   P   TY  +V+G+A  D L+ +  + +E + + +
Sbjct: 487 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGI 530



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 217/444 (48%), Gaps = 2/444 (0%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
            +L   L +A ++  A+  + +M      P  S+YT L+  L +      A++L+ +M++
Sbjct: 14  ADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQE 73

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            GY      + +LVR L   G +  +L  +D +    L P+   Y+  ++   K   V  
Sbjct: 74  VGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 133

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A K   ++ A+G KP+ VSY  ++  LCK GR  EA   F  + ++   P   +YN ++ 
Sbjct: 134 ACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 193

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
                GR+E+A +LL  +      P++V++N ++  L    K D AL +  E++K    P
Sbjct: 194 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 252

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
           ++++YN II  LC  G+V+   + LD+M H    PN  T N +   LC   K++EA+ I 
Sbjct: 253 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 312

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           +S   +  +     Y  +I  L +KG+  +A++L  +M   G   +   Y+SLIR   + 
Sbjct: 313 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 372

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G  E+  ++F  +     KPD+   N  +  + K+   +    +F+ +   G +P+  +Y
Sbjct: 373 GRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 432

Query: 521 TILVEGIAHQDELELSAEVLKELQ 544
           +IL+ G+    +   ++ +   ++
Sbjct: 433 SILIHGLTKAGQARETSNIFHAMK 456



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 211/473 (44%), Gaps = 37/473 (7%)

Query: 91  SKGHKPDVVQATNLLYDLCKANKM-----------------------------------K 115
           ++G KPD V  T++++ LCKA ++                                   +
Sbjct: 143 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFE 202

Query: 116 KAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
            A K++E +   G IP   S+  ++ CL KK  V  A+ L E M+    P N+ TYN ++
Sbjct: 203 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-NSSTYNIII 261

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
             LC+ G + ++ + LD +    L PN  T + +++   K R +  A K+ +    +G  
Sbjct: 262 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 321

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P+ V+Y  L+ GL K+G+ +EA R F  +   G   N V Y  L+R+  + GR E+ +++
Sbjct: 322 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKV 381

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             E+      P +   N  +  +   G+ +    + +++    F P   SY+ +I  L  
Sbjct: 382 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 441

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G+          M  +    +   YN +    C  GKV +A+ I++ +  K        
Sbjct: 442 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 501

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  ++  L +  +  +A+ L  E    G   +   YSSLI G    G I+EA  I   M 
Sbjct: 502 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 561

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +    P+V  +N+LL  L K+   + +L  FQ M E    PN  TY+IL+ G+
Sbjct: 562 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 614



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 172/387 (44%), Gaps = 6/387 (1%)

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           YG P        L   L     L+ ++  +  + +    P    Y+ L+ A  + R    
Sbjct: 6   YGLPNQACA--DLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPER 63

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A++LL  +   G +  +  +  L+  L +EG+  +A+    ++     EP++V YN+ + 
Sbjct: 64  ALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCID 123

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
                G  + A +   E+      P  V+Y  +I  L   G+   A ++  +M   R  P
Sbjct: 124 CFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVP 183

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG-KVQEAFAII 400
            A +YN +I    S G+ +   K L+++  R C P+  ++N +    G   KV EA ++ 
Sbjct: 184 CAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF 243

Query: 401 QSLGNKQNSSP-QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           + +  K+++ P    Y  +I  LC  G+  +A+++L EM      P+  T + ++  LC 
Sbjct: 244 EVM--KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 301

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
              +EEA +IF    +    PD   + +L+ GL K  + D +  +F+ M++ G   N   
Sbjct: 302 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 361

Query: 520 YTILVEGIAHQDELELSAEVLKELQLR 546
           YT L+         E   +V KEL  R
Sbjct: 362 YTSLIRNFFIHGRKEDGHKVFKELIRR 388



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 87/191 (45%), Gaps = 1/191 (0%)

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           PN+   +  A L    ++ +A   +  +   +       Y  +I +L    +  +A +LL
Sbjct: 9   PNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELL 68

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +M + G+    + +++L+R L  EG + +AL +   ++    +PD+  +N  +    K+
Sbjct: 69  RQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKA 128

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL-RQVVSESAV 554
              D++ + F  +  +G  P++ +YT ++  +     L  + E+  +++  R V    A 
Sbjct: 129 GNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY 188

Query: 555 ERLVMQYDFEG 565
             ++M Y   G
Sbjct: 189 NTMIMGYGSAG 199



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++N+A +  + M      P+    + L+  LC+  K  KA    + M   G++
Sbjct: 577 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 636

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT +++ L K GN+  A  L E+ +  G   +  ++N+L+ G   + N N++++ 
Sbjct: 637 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG---MSNANRAMEA 693

Query: 191 LDRLIQKGLVPNAFTYSFLL 210
               + + L  ++ +++FL+
Sbjct: 694 YQTTVYQ-LSSSSCSWNFLV 712


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 220/455 (48%), Gaps = 7/455 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++++++ A   L  M +KG +PDVV  T ++  + K  K+++A ++     S    P+ S
Sbjct: 196 KNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVS 250

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+N  C++  V     L+ +M + G   N +TY++++  L  +GN+  +L    ++
Sbjct: 251 VYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKM 310

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G  PN +T++ L++  +    V  A+ + + +  +G +PN+V+YN L+ GLC  G+ 
Sbjct: 311 FVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKM 370

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA+     +   G  PNV +Y  L+      G    A+E+  +M      P +V Y  +
Sbjct: 371 GEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSM 430

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L        A  ++++M      P+  ++N  I  LC  G+V+  +    QM    C
Sbjct: 431 VNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGC 490

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN  L  L    +++EA  ++  +  K        Y  +    C  GK  +A +
Sbjct: 491 SPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALK 550

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE-YDYKPDVDNFNALLLGL 492
           LL +M   G  PD+ TY++L    CM+G ++ A+++   +     + P+V  + +LL G+
Sbjct: 551 LLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGI 610

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           C     + ++     M+ +G   N  T+  LV G+
Sbjct: 611 CNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 200/430 (46%), Gaps = 6/430 (1%)

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           ++A+K+   +   G  P    Y +L++ +  +        +   M+  G   N  TYN L
Sbjct: 131 EQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNIL 190

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           ++ LC    ++ + + L  +  KG  P+  +Y+ ++ +  K   V  A +L         
Sbjct: 191 LKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF----- 245

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +PN+  YN L+ G C+E + +E       +  KG +PNV++Y+ ++ SL   G  E A  
Sbjct: 246 QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALA 305

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           + A+M     SP + T+  L+      G+   AL + + M +  F P+  +YN +I  LC
Sbjct: 306 VWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLC 365

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
           S GK+   V    +M    C PN  TY  L       G +  A  I   +          
Sbjct: 366 SHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVV 425

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  ++  LCR     QA+ L+ +M+     P++ T+++ I+GLC  G +E A+ +F  M
Sbjct: 426 VYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQM 485

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           E+Y   P++  +N +L GL K  R   +LE+   M EKG   N  TY  +  G  +  + 
Sbjct: 486 EQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKF 545

Query: 534 ELSAEVLKEL 543
           E + ++L ++
Sbjct: 546 EEALKLLGKM 555



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 214/474 (45%), Gaps = 6/474 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           +T  R      A     R+   G +P V    +LL  +   N+ +    +   M   G  
Sbjct: 122 NTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKE 181

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L+  LCK   V  A +L+ +M + G   + V+Y +++  +  LG + ++ + 
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL 241

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R       PN   Y+ L+    +E  V     LL  ++ KG  PN+++Y+ +++ L  
Sbjct: 242 SIRF-----QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSG 296

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  E A+  +  +  +G  PNV ++  L++   M GR  EA  +   M      P +V 
Sbjct: 297 IGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVA 356

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  L  HGK   A+ V  +M +    P+ ++Y  +I      G +    +  ++M 
Sbjct: 357 YNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMM 416

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              C PN   Y  +  +LC      +A+++I+ +           +   I  LC  G+  
Sbjct: 417 TNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVE 476

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A  L  +M +YG +P+  TY+ ++ GL  E  I+EALE+   MEE   + ++  +N + 
Sbjct: 477 CAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIF 536

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G C   + + +L++   M+  G  P+  TY  L      Q +++ + ++L +L
Sbjct: 537 GGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKL 590



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 200/426 (46%), Gaps = 6/426 (1%)

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
           +++ M   GI      +  ++N   + G    A+++  ++ ++G       YN L+  + 
Sbjct: 101 LLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAML 160

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
                         + + G  PN +TY+ LL+A  K   V  A KLL ++  KG +P++V
Sbjct: 161 SENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVV 220

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           SY  +++ + K G+ EEA    R+L  + F+PNV  YN L+   C E + +E   LL +M
Sbjct: 221 SYTTVISSMSKLGKVEEA----RELSIR-FQPNVSVYNALINGFCREYKVKEVFLLLGQM 275

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P ++TY+ +I SL+  G  + AL V  +M      P+  ++  ++      G+V
Sbjct: 276 VEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRV 335

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
              +   ++M     +PN   YN L   LC  GK+ EA ++   +     S     Y  +
Sbjct: 336 LEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGAL 395

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I    + G    A ++  +M   G  P+   Y+S++  LC   +  +A  +   M   + 
Sbjct: 396 IDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNC 455

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P+   FN  + GLC S R + ++ +F  M + G  PN  TY  +++G+  ++ ++ + E
Sbjct: 456 PPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALE 515

Query: 539 VLKELQ 544
           ++ E++
Sbjct: 516 LVTEME 521



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 91/174 (52%), Gaps = 2/174 (1%)

Query: 62  PNRKPGNNN-DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PN K  N   D   +++++ +A   +  M  KG + ++V    +    C   K ++A+K+
Sbjct: 492 PNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKL 551

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLC 179
           +  M+  G+ PDA +Y  L    C +G V  A+QL++K+   G +      Y SL+ G+C
Sbjct: 552 LGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGIC 611

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
               + +++ +LD+++ +G+  NA T++ L+   +   G    + +LDDI+  G
Sbjct: 612 NQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTSG 665



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 44/299 (14%)

Query: 253 RTEEAI----RFFRDLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           RTE  I     +FR +  SK F+   ++Y I++  L  E   +    LL +M     S +
Sbjct: 54  RTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCS 113

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
              +  +I +    G  + ALK+   + +   +P+   YN ++  + SE +  ++     
Sbjct: 114 EDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYS 173

Query: 368 QMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
            M     +PN  TYN L                                  + +LC+  +
Sbjct: 174 NMKRDGKEPNVYTYNIL----------------------------------LKALCKNNR 199

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A +LL EM+  G  PD  +Y+++I  +   G +EEA E+ +      ++P+V  +NA
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSI-----RFQPNVSVYNA 254

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           L+ G C+  +      +   M+EKG  PN  TY+ ++  ++    +EL+  V  ++ +R
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVR 313



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 3/174 (1%)

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C V  VQ    ++Q +  +  S  ++ +  VI +  R G   QA ++ Y + ++G  P  
Sbjct: 93  CDVDGVQ---YLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTV 149

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             Y+ L+  +  E   +    I+  M+    +P+V  +N LL  LCK+ R D + ++   
Sbjct: 150 KIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVE 209

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           M  KG  P+  +YT ++  ++   ++E + E+    Q    V  + +     +Y
Sbjct: 210 MSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREY 263


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 236/522 (45%), Gaps = 61/522 (11%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA  Q +R   +G  P ++    L+  L +  K+  A+ +   +   G+ P+  +Y   +
Sbjct: 178 DALFQTKR---RGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFI 234

Query: 141 NCLCKKGNVGYAMQLVEKMEDYG-----------------------------------YP 165
             LC+KGN   A+ +  +ME+ G                                   +P
Sbjct: 235 KALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWP 294

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            +T  Y +++RG C    L ++      ++ +G+ P+ + Y  L+ A  K   +  A+ L
Sbjct: 295 IDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVAL 354

Query: 226 LDDIIAKGGKPNLVS----------------YNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
            +D+++ G K NLV                 YN+++  LCK G+ EEA+    ++  +  
Sbjct: 355 HNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRM 414

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
             +VV Y  L+   C++G+  +A  +  EM      P IVTYNIL+G  + +G    AL+
Sbjct: 415 SLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALE 474

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
           +LD +     +P++A++N II  LC  GKV      L+ +  +  +      +G      
Sbjct: 475 LLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANF 534

Query: 390 VGKVQEAFAIIQSLGNKQ----NSSP-QEFYKYVITSLCRKGKTYQAFQLLYEM-TKYGF 443
             K  E F+ +   G  +    +  P Q  Y  +I + CR G   +A QL+++M  + G 
Sbjct: 535 TRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRA-QLVFDMLVERGI 593

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           TPD  TY+ +I G C    + EA +IF  M+E   KPDV  +  +L G  K+     ++ 
Sbjct: 594 TPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAIN 653

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           ++  MI +G  P+  TYT L+ G  +        + L+E +L
Sbjct: 654 LYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEEPKL 695



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 167/399 (41%), Gaps = 21/399 (5%)

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           LV+    +G  ++++  L +  ++G VP+  + +FL+    +   +  A+ +   +   G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             PN  +Y + +  LC++G  EEA+  FR++   G  PN V+ +  +  LC   R +   
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           E L  +   +       Y  +I       K   A  V  +MV     P    Y  +I   
Sbjct: 283 EALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAY 342

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPN----------------EGTYNGLA-MLCGVGKVQEA 396
           C  G +   V   + M     K N                E  YN +   LC +GKV+EA
Sbjct: 343 CKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEA 402

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             ++  +  ++ S     Y  +I   C +GK   A  +  EM + G  PD  TY+ L+ G
Sbjct: 403 VELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGG 462

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
               GL +EALE+   +     KP+    N ++ GLC + +     E F   +E   + N
Sbjct: 463 FSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK-EAEAFLNTLEDKCLEN 521

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
              Y+ +V+G    +    + E+   L  + ++   A++
Sbjct: 522 ---YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALD 557



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 180/440 (40%), Gaps = 54/440 (12%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI---QKGLVPNAFTYSF 208
           A     ++++ G+  N  TY +L+R LC    L + LQ L   I   ++ ++    T  F
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRW-RLERKLQSLLSEIVGSKESVLGFDITALF 138

Query: 209 -----------------------LLEAAYKERGVH-AAMKLLDDIIAKGGKPNLVSYNVL 244
                                  +L  AY   G+   A+  L     +G  P+++S N L
Sbjct: 139 DVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFL 198

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           +  L + G+ + A+  +R L   G  PN  +Y I +++LC +G +EEA ++  EM+    
Sbjct: 199 MNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGV 258

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           +P  VT +  I  L  H ++D   + L  +    +     +Y  +I   CSE K+     
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAED 318

Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI---IQSLGNKQNSSPQEFYKYVIT 420
               M +    P+   Y  L    C  G + +A A+   + S G K N   Q        
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQ-------- 370

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
                           E    G   D   Y+ ++  LC  G +EEA+E+   M+      
Sbjct: 371 --------------FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSL 416

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           DV ++  L+ G C   +   +  +F+ M E+G  P+  TY ILV G +     + + E+L
Sbjct: 417 DVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELL 476

Query: 541 KELQLRQVVSESAVERLVMQ 560
             +  + +   SA    +++
Sbjct: 477 DCIGTQGLKPNSATHNRIIE 496



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 17/173 (9%)

Query: 20  RKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKL 79
           RKAY  +S++         +G +R+LA   + + P   +Y       G       RD  +
Sbjct: 536 RKAYELFSRLSK-------QGILRMLA---LDVEPNQIMY-------GKLIGAFCRDGDM 578

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
             A L  + +V +G  PDV+  T ++   C+ N +++A  +   M   GI PD  +YT +
Sbjct: 579 KRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVV 638

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           ++   K  N+  A+ L ++M   G   + VTY +L+ G C  G+ +   Q+L+
Sbjct: 639 LDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLE 691


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 209/470 (44%), Gaps = 44/470 (9%)

Query: 43  RVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQAT 102
           R L S Q T S   ++     + P   N        ++DA  Q   M+   H P V+Q  
Sbjct: 23  RALISPQQTQSILSNLILTKVKPPSIQN--------VDDAVSQFNSMLCMRHTPPVIQFN 74

Query: 103 NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
            +L           A+ +   +   GI PD  +   L+NC C  G + +   ++ K+   
Sbjct: 75  KILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSVLAKILKR 134

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           GY  +T+T+ +L++GLC+ G +N++L F D+L+ +G+  +  +Y  L+    K      A
Sbjct: 135 GYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGA 194

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           +KL+  I  +  KPN+  YN ++  LCK     EA   F ++ +KG   NVVSYNI+++ 
Sbjct: 195 IKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKG 254

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C     +EA  L  EM   +  PTIVTY  L+  L   G+  +  +++DEM        
Sbjct: 255 FCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPAD 314

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
             +YN +I  LC  G +D  +   ++M   R       ++ L                  
Sbjct: 315 VITYNSLIDGLCKNGHLDRAIALFNKMKDXR-------FDRLT----------------- 350

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
                       +  ++  LC+ G+   A ++  ++    +  D Y Y+ +I G C +GL
Sbjct: 351 ------------FTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGL 398

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +EEAL +   ME+    P    F  ++  L +    D + ++   MI +G
Sbjct: 399 LEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARG 448



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 193/416 (46%), Gaps = 36/416 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +  +++      +   A+ L  ++E  G   +  T N L+   C +G +N     
Sbjct: 68  PPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSV 127

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L +++++G  P+  T++ L++    +  V+ A+   D ++A+G K + VSY  L+ G+CK
Sbjct: 128 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 187

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G T  AI+  R +  +  +PNV  YN ++ +LC      EA  L +EM     S  +V+
Sbjct: 188 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVS 247

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNI+I         D AL +  EM +    P+  +Y  ++  LC  G++  V + +D+M 
Sbjct: 248 YNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEM- 306

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           H R  P +                    +I              Y  +I  LC+ G   +
Sbjct: 307 HDRGIPAD--------------------VIT-------------YNSLIDGLCKNGHLDR 333

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  L  +M    F  D  T++ L+ GLC  G +++A E+F  +   +Y  DV  +N ++ 
Sbjct: 334 AIALFNKMKDXRF--DRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMIN 391

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           G CK    + +L +   M + G +P+  T+ I++  +  +DE + + ++L E+  R
Sbjct: 392 GYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIAR 447



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 173/400 (43%), Gaps = 36/400 (9%)

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            + +N ++     + + + ++    RL  KG+ P+ FT + L+        ++    +L 
Sbjct: 70  VIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSVLA 129

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            I+ +G +P+ +++  L+ GLC +G+  +A+ F   L ++G + + VSY  L+  +C  G
Sbjct: 130 KILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIG 189

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
               A +L+ ++DG    P +  YN +I +L  +     A  +  EM       +  SYN
Sbjct: 190 DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYN 249

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQ 407
            +I   C    VD  +    +M  +   P   TY  L                       
Sbjct: 250 IMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSL----------------------- 286

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                      +  LC+ G+    ++L+ EM   G   D  TY+SLI GLC  G ++ A+
Sbjct: 287 -----------MDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAI 335

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +F  M+  D + D   F  LL GLCK  R   + EVFQ ++ K    +   Y +++ G 
Sbjct: 336 ALFNKMK--DXRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGY 393

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGIE 567
             Q  LE +  +  +++    +  +    +++   FE  E
Sbjct: 394 CKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDE 433



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 141/292 (48%), Gaps = 1/292 (0%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +      P V+ +N +L S      +  A  L   ++     P   T NI
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+    + G+ +    VL +++K  ++P   ++  +I  LC +G+V+  +   D++  + 
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            K ++ +Y  L   +C +G  + A  +++ +  +      E Y  +I +LC+     +A+
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L  EMT  G + +  +Y+ +I+G C   +++EAL +F  M + +  P +  + +L+ GL
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGL 290

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           CKS R     E+   M ++G   +  TY  L++G+     L+ +  +  +++
Sbjct: 291 CKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMK 342



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           K  + D +  T LL  LCK  ++K A +V + +++     D   Y  ++N  CK+G +  
Sbjct: 342 KDXRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEE 401

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           A+ +  KMED G   + VT+  ++  L      +++ + L  +I +GL+
Sbjct: 402 ALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARGLL 450



 Score = 45.4 bits (106), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 28/157 (17%), Positives = 67/157 (42%)

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           +  V +A +   S+   +++ P   +  ++ S         A  L + +   G  PD +T
Sbjct: 48  IQNVDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFT 107

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
            + L+   C  G I     +   + +  Y+P    F  L+ GLC   + + +L     ++
Sbjct: 108 LNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 167

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +G   ++ +Y  L+ G+    +   + ++++++  R
Sbjct: 168 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGR 204


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 232/497 (46%), Gaps = 41/497 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GI 129
           D   R H+   A     +++  G + D++ A +LL   C+A +  +A+ ++       G 
Sbjct: 123 DCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGC 182

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--PTNTVTYNSLVRGLCMLGNLNQS 187
           +PD  SY+ L+  LC +G  G A  L+  M + G     + V Y +++      G++N++
Sbjct: 183 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKA 242

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                 ++Q+G+ P+  TYS ++ A  K R +  A   L  ++ KG  P+  +YN L+ G
Sbjct: 243 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYG 302

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
               G+ +EA+R F+++      P+VV+ N+L+ SLC  G+ +EA ++   M    ++P 
Sbjct: 303 YSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 362

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + +Y I++   A  G       + D M+     P   +++ +I    + G +D  +   +
Sbjct: 363 VFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFN 422

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQE------------- 413
           +M     KP+  TY   +A LC +GK+ +A      + + Q  +P +             
Sbjct: 423 EMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMID-QGVAPDKYAYHCLIQGFCTH 481

Query: 414 -----------------------FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
                                  F+  +I +LC+ G+   A  +       G  PD+  Y
Sbjct: 482 GSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVY 541

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S L+ G C+ G +E+AL +F  M     +P+V  +  L+ G CK  R D  L +F+ M++
Sbjct: 542 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQ 601

Query: 511 KGQMPNETTYTILVEGI 527
           KG  P+   Y I+++G+
Sbjct: 602 KGIKPSTILYNIIIDGL 618



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 210/440 (47%), Gaps = 3/440 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AFL+  +MV+KG  PD     NL+Y      + K+A++V + M    I+PD  +   L+
Sbjct: 278 EAFLR--QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LCK G +  A  + + M   G   +  +Y  ++ G    G L       D ++  G+ 
Sbjct: 336 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIA 395

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ +T+S L++A      +  AM + +++   G KP++V+Y  ++  LC+ G+ ++A+  
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +  +G  P+  +Y+ L++  C  G   +A EL+ E+        IV ++ +I +L  
Sbjct: 456 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCK 515

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+   A  + D  V     P A  Y+ ++   C  GK++  ++  D M     +PN   
Sbjct: 516 LGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 575

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y  L    C +G++ E  ++ + +  K        Y  +I  L   G+T  A    +EMT
Sbjct: 576 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMT 635

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G   +  TY+ ++RG       +EA+ +F  +   + K D+   N ++ G+ ++RR +
Sbjct: 636 ESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 695

Query: 500 LSLEVFQMMIEKGQMPNETT 519
            + ++F  +   G +P   T
Sbjct: 696 EAKDLFASISRSGLVPCVVT 715



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 205/470 (43%), Gaps = 45/470 (9%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
           P + +Y  L++C  +      A+    ++   G   + +  N L++G C     +++L  
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAA------------------------------------ 213
            L R  + G VP+ F+YS LL++                                     
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232

Query: 214 -YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
            +KE  V+ A  L  +++ +G  P+LV+Y+ ++  LCK     +A  F R + +KG  P+
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             +YN L+      G+W+EA  +  EM      P +VT N+L+GSL  +GK   A  V D
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVG 391
            M      P   SY  ++    ++G +  +    D M      P+  T++ L       G
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            + +A  I   + +         Y  VI +LCR GK   A +   +M   G  PD Y Y 
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            LI+G C  G + +A E+ + +     + D+  F++++  LCK  R   +  +F + +  
Sbjct: 473 CLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNV 532

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           GQ P+   Y++L++G     ++E      K L++   +  + +E  V+ Y
Sbjct: 533 GQHPDAVVYSMLMDGYCLVGKME------KALRVFDAMVSAGIEPNVVVY 576



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 171/384 (44%), Gaps = 39/384 (10%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L P + TY+ L++   +      A+     ++  G + +++  N LL G C+  RT+EA+
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 259 R-FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR--SPTIVTYNILI 315
                  P  G  P+V SY+ILL+SLC +G+  +A++LL  M  G    SP +V Y  +I
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G  + A  +  EMV+    P   +Y+ ++  LC    +      L QM ++   
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 376 PNEGTYNGL------------------------------------AMLCGVGKVQEAFAI 399
           P+  TYN L                                      LC  GK++EA  +
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
             ++  K  +     YK ++     KG       L   M   G  PD YT+S LI+    
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G++++A+ IF  M ++  KPDV  +  ++  LC+  + D ++E F  MI++G  P++  
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
           Y  L++G      L  + E++ E+
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEI 494



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 140/282 (49%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A +    M   G KPDVV  T ++  LC+  KM  A++    M+  G+ PD  +Y  
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   C  G++  A +L+ ++ + G   + V ++S++  LC LG +  +    D  +  G
Sbjct: 474 LIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVG 533

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+A  YS L++       +  A+++ D +++ G +PN+V Y  L+ G CK GR +E +
Sbjct: 534 QHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGL 593

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             FR++  KG +P+ + YNI++  L + GR   A     EM     +    TYNI++   
Sbjct: 594 SLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGF 653

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
             +   D A+ +  E+     +    + N +IA +    +V+
Sbjct: 654 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 695



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 144/305 (47%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A    + M  KG  PDV     +L        +     + ++M+  GI PD  +++
Sbjct: 343 KIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFS 402

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+      G +  AM +  +M D+G   + VTY +++  LC +G ++ +++  +++I +
Sbjct: 403 VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQ 462

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+ + Y  L++       +  A +L+ +I+  G + ++V ++ ++  LCK GR  +A
Sbjct: 463 GVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDA 522

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F    + G  P+ V Y++L+   C+ G+ E+A  +   M      P +V Y  L+  
Sbjct: 523 QNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNG 582

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D  L +  EM++   +PS   YN II  L   G+         +M       N
Sbjct: 583 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAIN 642

Query: 378 EGTYN 382
           + TYN
Sbjct: 643 KCTYN 647



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 98/198 (49%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    +  V+ G  PD V  + L+   C   KM+KA++V + MVS+GI P+   Y 
Sbjct: 518 RIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYG 577

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN  CK G +   + L  +M   G   +T+ YN ++ GL + G    +      + + 
Sbjct: 578 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTES 637

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+  N  TY+ +L   +K R    A+ L  ++ A   K ++++ N ++ G+ +  R EEA
Sbjct: 638 GIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 697

Query: 258 IRFFRDLPSKGFEPNVVS 275
              F  +   G  P VV+
Sbjct: 698 KDLFASISRSGLVPCVVT 715



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 69/151 (45%), Gaps = 3/151 (1%)

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           ++ G +  S     Y  ++    R  +   A     ++ + G   D    + L++G C  
Sbjct: 104 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEA 163

Query: 461 GLIEEALEIFV-VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM--PNE 517
              +EAL+I +    E    PDV +++ LL  LC   ++  + ++ +MM E G +  P+ 
Sbjct: 164 KRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDV 223

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             YT +++    + ++  + ++ KE+  R +
Sbjct: 224 VAYTTVIDCFFKEGDVNKACDLFKEMVQRGI 254


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 220/480 (45%), Gaps = 45/480 (9%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY--LVNCLCKKGNVG 150
           G  PDV     LL  LC A +M+ A +V + M      P+ + +++  L    C+ G   
Sbjct: 145 GAAPDVFTRNILLQALCAAGRMELARRVFDAM------PERNEFSFGILARGYCRAGRSM 198

Query: 151 YAMQLVEKMEDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
            A+ +++ M     PT N V  N++V G C  G ++++ + ++R+  +GL PN  T++  
Sbjct: 199 DALGVLDSM-----PTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNAR 253

Query: 210 LEAAYKERGVHAAMKLLDDIIAKG----GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           + A  K   V  A ++ +D+  K      +P+ V+++V+L+G C+ G  +EA      + 
Sbjct: 254 ISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMR 313

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             GF   V SYN  L  L   G   EA ELL EM      P   TYNI++  L   GK  
Sbjct: 314 CGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAF 373

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
              KV D +  G   P   +Y  ++   CSEG      + LD+M  + C PN  TYN L 
Sbjct: 374 DVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLL 433

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG-- 442
             L   G++ EA  +++ +  K  S        +I  LCR  K   A  ++  M   G  
Sbjct: 434 QSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSL 493

Query: 443 ---------------------FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
                                  PD  TYS+L+  LC EG  +EA +  + M   D  PD
Sbjct: 494 ALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPD 553

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              ++  + G CK  +T L+++V + M +KG  P+  TY +L+ G   +     S E+LK
Sbjct: 554 SVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHN---SDEILK 610



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 226/458 (49%), Gaps = 17/458 (3%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           ++V    ++   C+  ++ +A +++E M   G+ P+  ++   ++ LCK G V  A ++ 
Sbjct: 211 NLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIF 270

Query: 157 EKMED---YGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             M++    G P  + VT++ ++ G C  G ++++   +D +   G +    +Y+  L  
Sbjct: 271 NDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSG 330

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEP 271
             +   V  A +LL ++  +G +PN  +YN+++ GLCKEG+  + +R   D    G   P
Sbjct: 331 LVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFD-VRKVEDFVKSGVMTP 389

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +VV+Y  LL + C EG    AN +L EM     +P   TYN+L+ SL   G+   A ++L
Sbjct: 390 DVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLL 449

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG 391
           + M +  +    AS N II  LC   K+D+ +  +D M+      NEG+   LA+  G  
Sbjct: 450 ERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMW------NEGS---LAL--GRL 498

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
                  +  S  +K+    +  Y  ++++LC++G+  +A + L EM     +PDS  Y 
Sbjct: 499 GYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYD 558

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           + I G C  G    A+++   ME+   KP    +N L+ G  +   +D  L++   M  K
Sbjct: 559 TFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGK 618

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           G  PN  TY  L++    +  +  +  +L E+   ++V
Sbjct: 619 GICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIV 656



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 218/478 (45%), Gaps = 31/478 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV---MEMMVSSGII- 130
           R+ ++++A   +ERM  +G  P+VV     +  LCKA ++  A ++   M+     G+  
Sbjct: 224 REGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPR 283

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  +++  C+ G V  A  LV+ M   G+     +YN  + GL   G + ++ + 
Sbjct: 284 PDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQEL 343

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +  +G+ PN++TY+ +++   KE       K+ D + +    P++V+Y  LL   C 
Sbjct: 344 LREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCS 403

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG    A R   ++  KG  PN  +YN+LL+SL   GR  EA  LL  M     S    +
Sbjct: 404 EGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTAS 463

Query: 311 YNILIGSLAYHGKTDHALKVLDEM-----------------------VKGRFRPSAASYN 347
            NI+I  L  + K D A+ ++D M                          R  P   +Y+
Sbjct: 464 CNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYS 523

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            +++ LC EG+ D   K L +M  +   P+   Y+      C  GK   A  +++ +  K
Sbjct: 524 TLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKK 583

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  +I     K  + +  +L+ EM   G  P+  TY+SLI+  C  G++ +A
Sbjct: 584 GCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKA 643

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK-GQMPNETTYTIL 523
           + +   M + +  P++ +F  L+   CK+     +  VF   +   GQ   E  Y+++
Sbjct: 644 MPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQ--KEVLYSLM 699



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 207/470 (44%), Gaps = 33/470 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + +A   L  M  +G +P+      ++  LCK  K     KV + + S  + PD  
Sbjct: 333 RNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVV 392

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++  C +GN   A +++++M   G   N+ TYN L++ L   G + ++ + L+R+
Sbjct: 393 TYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERM 452

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG----GK--------------- 235
            +KG   +  + + +++   +   +  AM ++D +  +G    G+               
Sbjct: 453 SEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSS 512

Query: 236 ----PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
               P+ ++Y+ L++ LCKEGR +EA +   ++  K   P+ V Y+  +   C  G+   
Sbjct: 513 KRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSL 572

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A ++L +M+     P+  TYN+LI        +D  LK++ EM      P+  +YN +I 
Sbjct: 573 AVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIK 632

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGK---VQEAF-AIIQSLGNK 406
             C  G V+  +  LD+M      PN  ++  L    C        Q  F A + + G K
Sbjct: 633 SFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQK 692

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                +  Y  + T L   G+  +A  +L  + +   +   + Y  +I GLC    ++  
Sbjct: 693 -----EVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHG 747

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
             +  ++    Y  D   F  ++  L +  +      + Q M+E  +  N
Sbjct: 748 HRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMAERDN 797



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 158/346 (45%), Gaps = 17/346 (4%)

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            Y+ LL AA +E        L  D++  G  P++ + N+LL  LC  GR E A R F  +
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT--IVTYNILIGSLAYHG 322
           P    E N  S+ IL R  C  GR  +A  +L  M      PT  +V  N ++      G
Sbjct: 177 P----ERNEFSFGILARGYCRAGRSMDALGVLDSM------PTMNLVVCNTVVAGFCREG 226

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR----CKPNE 378
           + D A ++++ M      P+  ++N  I+ LC  G+V    +  + M  +      +P++
Sbjct: 227 QVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQ 286

Query: 379 GTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            T++  L+  C  G V EA  ++  +         E Y   ++ L R G   +A +LL E
Sbjct: 287 VTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLRE 346

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  P+SYTY+ ++ GLC EG   +  ++   ++     PDV  + +LL   C    
Sbjct: 347 MAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGN 406

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              +  +   M +KG  PN  TY +L++ +     +  +  +L+ +
Sbjct: 407 AAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERM 452


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 222/465 (47%), Gaps = 40/465 (8%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LC   K      V+ +M   G+ P   +   +VN LC +G+V +A+ LVEKME+ GY  N
Sbjct: 120 LCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCN 179

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
             TY +LV GLC +G+ + +L+ L +++++ L PN   Y+ +L+   K   V  A+ LL 
Sbjct: 180 ARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLH 239

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKE-GRTEEAIRFFRDLPS-KGFEPNVVSYNILLRSLCM 285
           ++     +PN+V+YN L+ GLC E G   E +  F ++ + KG  P+V +++IL+   C 
Sbjct: 240 EMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCK 299

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK--GRFRPSA 343
           EG    A  ++  M      P +VTYN LI       + + A++V   MV+      PS 
Sbjct: 300 EGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSV 359

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGK---VQEAFAI 399
            ++N +I   C   +VD  +  L +M  +   P+  T+  L    C V K    +E F  
Sbjct: 360 VTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFT 419

Query: 400 IQSLGNKQNSSPQE--------------------------------FYKYVITSLCRKGK 427
           ++  G   N                                      Y  ++  +C+ GK
Sbjct: 420 MKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGK 479

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A +LL  +   G   DSYTY+ +I+GLC EGL+++A E+   M+E    P+  ++N 
Sbjct: 480 LNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNV 539

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
            + GL +      S +  Q+M +KG   + TT  +L+  ++  +E
Sbjct: 540 FVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLSANEE 584



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 248/510 (48%), Gaps = 30/510 (5%)

Query: 59  YTKP-NRKPGNNNDTRHRDHKLN--------DAFLQLE---RMVSKGHKPDVVQATNLLY 106
           Y+ P +  P   +D  HR   LN        DA + ++   RM++    P  +Q  NLL+
Sbjct: 23  YSHPFSTSPPPISDAAHRTLLLNSIRTLETADAVVAVDFFHRMLTLTPFP-CIQDFNLLF 81

Query: 107 DL-CKANKMKKAIKVMEMMVSSGI-IPDASSYTYLVNCLC--KKGNVGYAMQLVEKMEDY 162
            L  K+     AI +++++ S G    D  +    +NCLC  +K  +G+A+  +  M   
Sbjct: 82  GLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAV--LGLMTKI 139

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G     VT N++V GLC+ G++N +L  ++++   G   NA TY  L+    K      A
Sbjct: 140 GLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGA 199

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           ++ L  ++ +   PN+V YN +L GLCK G   EA+    ++     EPNVV+YN L++ 
Sbjct: 200 LECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQG 259

Query: 283 LCME-GRWEEA----NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
           LC E G W E     NE++AE       P + T++IL+      G    A  V+  MV+ 
Sbjct: 260 LCGEFGGWREGVGLFNEMVAEK---GIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRI 316

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH--RRCKPNEGTYNGLAM-LCGVGKVQ 394
              P+  +YN +IA  C   +++  ++    M      C P+  T+N L    C V +V 
Sbjct: 317 GVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVD 376

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A +++  +  K        +  +I   C   K   A +L + M ++G  P+  T + ++
Sbjct: 377 KAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVL 436

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GL    L  EA+ +F  M +     D+  +N +L G+CK  + + + ++   ++ KG  
Sbjct: 437 DGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLK 496

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +  TY I+++G+  +  L+ + E+L++++
Sbjct: 497 IDSYTYNIMIKGLCREGLLDDAEELLRKMK 526



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 135/278 (48%), Gaps = 13/278 (4%)

Query: 19  FRKAYGFYSQ-------IPNLHSFS-LNKGFIR--VLASTQVTISPKDSVYTKPNRKPGN 68
           +R+  G +++       +P++ +FS L  GF +  +L   +  +     +  +PN    N
Sbjct: 267 WREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYN 326

Query: 69  NNDTRH-RDHKLNDAFLQLERMVSKGHK--PDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
           +    +    ++ +A      MV +G    P VV   +L++  CK  ++ KA+ ++  MV
Sbjct: 327 SLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMV 386

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
             G+ PD  ++T L+   C+      A +L   M+++G   N  T   ++ GL      +
Sbjct: 387 GKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDS 446

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           +++     +++ GL  +   Y+ +L+   K   ++ A KLL  ++ KG K +  +YN+++
Sbjct: 447 EAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMI 506

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            GLC+EG  ++A    R +   G  PN  SYN+ ++ L
Sbjct: 507 KGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGL 544



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 103/206 (50%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ A   L  MV KG  PDV   T+L+   C+  K   A ++   M   G +P+  +  
Sbjct: 374 EVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCA 433

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ L K      A+ L   M   G   + V YN ++ G+C +G LN + + L  ++ K
Sbjct: 434 VVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVK 493

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL  +++TY+ +++   +E  +  A +LL  +   G  PN  SYNV + GL ++     +
Sbjct: 494 GLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARS 553

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSL 283
            ++ + +  KGF  +  +  +L+R L
Sbjct: 554 RKYLQIMKDKGFPVDATTAELLIRFL 579


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 243/538 (45%), Gaps = 74/538 (13%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP-------------- 131
           L RM   G  P+ V  T L++  CKA   K+A+K    +  SG++               
Sbjct: 447 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYR 506

Query: 132 ---------------------DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
                                D +S+  +++  C++GNV  A  + + M  +G+P +  T
Sbjct: 507 EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICT 566

Query: 171 YNSLVRGLCMLGNLNQSLQFL-----------------------------------DRLI 195
           Y SL+RGLC  G+L Q+ +F+                                   ++++
Sbjct: 567 YGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMV 626

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            + ++P+ +TY+ LL+   K   +  A+ LL  ++ KG  P+ ++Y  LL GL  EG+ +
Sbjct: 627 TRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 686

Query: 256 EAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            A   F+++  K G   + ++YN ++      G+  E   L+  M   +  P+  +YNIL
Sbjct: 687 AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 746

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G+    L +  +MVK   +P   +Y  +I  LC  G +++ VK L++M     
Sbjct: 747 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEES 806

Query: 375 --KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
             +P    Y  L    C VG +  AF + + +        +     ++  LC+ GK  +A
Sbjct: 807 GLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 866

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             +   + + G  P   T+++L+ GLC E  I++A  +  +ME    K DV  +N L+ G
Sbjct: 867 IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 926

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           LC  +    +L++++ M  KG +PN TTY  L   +     ++   ++LK+++ R +V
Sbjct: 927 LCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIV 984



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 223/468 (47%), Gaps = 22/468 (4%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           +L L+  + +    DV     +L  LC   K+ KA  +++ M +  + P+A +Y  ++N 
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNW 273

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             KKG    A+++++ ME  G   +  TYN ++  LC L    ++   L R+ +  L P+
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPD 333

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             +Y+ L+   + E  ++ A+ + + ++ +  KP++ +Y  L+ G C+ GRT+EA R   
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLY 393

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++   G  P  VS               +A ++L  M      P ++TY+ LI  +   G
Sbjct: 394 EMQITGVRPREVS---------------KAKQILKCMLADGIDPDVITYSALINGMCKMG 438

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
                 ++L  M K    P+   Y  ++   C  G     +K    ++      N   +N
Sbjct: 439 MIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHN 498

Query: 383 GLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
             A+LC     G + EA    Q +   + S     +  +I S C++G   +AF +   M 
Sbjct: 499 --ALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMV 556

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           ++G+ PD  TY SL+RGLC  G + +A E  V + E     D    N LL+G+CK    D
Sbjct: 557 RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLD 616

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
            +L++ + M+ +  +P+  TYTIL++G   + ++ + A +L ++ L +
Sbjct: 617 EALDLCEKMVTRNILPDTYTYTILLDGFCKRGKI-VPALILLQMMLEK 663



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 232/522 (44%), Gaps = 71/522 (13%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANK--------------------MKKA 117
           K+N A     +M+ +  KP V   T L+   C+  +                    + KA
Sbjct: 349 KINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKA 408

Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
            ++++ M++ GI PD  +Y+ L+N +CK G +    +++ +M+  G   N V Y +LV  
Sbjct: 409 KQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFY 468

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE--------------------- 216
            C  G+  ++L++   + + GLV N+  ++ LL + Y+E                     
Sbjct: 469 FCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFD 528

Query: 217 -------------RG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
                        RG V  A  + D+++  G  P++ +Y  LL GLC+ G   +A  F  
Sbjct: 529 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 588

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            L  K    +  + N LL  +C  G  +EA +L  +M   +  P   TY IL+      G
Sbjct: 589 YLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRG 648

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-RCKPNEGTY 381
           K   AL +L  M++    P   +Y  ++  L +EG+    VK    MF    CK  EG Y
Sbjct: 649 KIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ----VKAASYMFQEIICK--EGLY 702

Query: 382 NGL----AMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                  +M+ G    G++ E   +++++   +       Y  ++    +KG+  +   L
Sbjct: 703 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 762

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLLGL 492
             +M K G  PD+ TY  LI GLC  GLIE A++    +V+EE   +P   ++ AL+   
Sbjct: 763 YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAK 822

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           C+    D + E+ + M   G +P+E   + +V G+    ++E
Sbjct: 823 CRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVE 864



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 177/403 (43%), Gaps = 30/403 (7%)

Query: 173 SLVRGLCMLG-NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV---HAAMKLLDD 228
           S++R L + G + +     L R I +    N F+   L+ A  KE  V    AA+  +D+
Sbjct: 129 SVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDE 188

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
               G K +L S N +L  L    ++E    F ++   + F  +V + NI+L SLC +G+
Sbjct: 189 C---GFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGK 245

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             +A  +L +M    R P  VTYN ++      G+   AL++LD+M K        +YN 
Sbjct: 246 LSKAESMLQKMKNC-RLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNI 304

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I +LC   +       L +M      P+E +YN L     G GK+  A  I   +  + 
Sbjct: 305 MIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQS 364

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT--------------------KYGFTPDS 447
                  Y  +I   CR G+T +A ++LYEM                       G  PD 
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDV 424

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TYS+LI G+C  G+I E  EI   M++    P+   +  L+   CK+     +L+ F  
Sbjct: 425 ITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 484

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           +   G + N   +  L+    +++ +   AE  K+   R  +S
Sbjct: 485 IYRSGLVANSVIHNALLCSF-YREGMIAEAEQFKQYMSRMKIS 526



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 2/278 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +++  E +  +G   D +   +++    K  ++ +  ++M  M  + + P ++SY  L++
Sbjct: 689 SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMH 748

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI--QKGL 199
              KKG +   + L   M   G   + VTY  L+ GLC  G +  +++FL++++  + GL
Sbjct: 749 GYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGL 808

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P    Y  L+ A  +   +  A +L +D+ A G  P+ V+ + ++ GLCK G+ EEAI 
Sbjct: 809 QPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAII 868

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F  +   G  P + ++  L+  LC E + ++A  L   M+       +VTYN+LI  L 
Sbjct: 869 VFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLC 928

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
                  AL + +EM      P+  +Y  +   + + G
Sbjct: 929 NKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATG 966



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 37/256 (14%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV--SSGIIPDASSYTYLVNCLCKK 146
           MV +G KPD V    L++ LC+   ++ A+K +E MV   SG+ P  + Y  L+N  C+ 
Sbjct: 766 MVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRV 825

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G++  A +L E M+  G   + V  +S+VRGLC  G + +++     +++ G+V      
Sbjct: 826 GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV------ 879

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
                                        P + ++  L+ GLCKE + ++A    + + S
Sbjct: 880 -----------------------------PTIATFTTLMHGLCKEFKIDDAFHLKQLMES 910

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G + +VV+YN+L+  LC +    +A +L  EM      P I TY  L G++   G    
Sbjct: 911 CGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQD 970

Query: 327 ALKVLDEMVKGRFRPS 342
             K+L ++      PS
Sbjct: 971 GEKLLKDIEDRGIVPS 986



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 161/365 (44%), Gaps = 46/365 (12%)

Query: 222 AMKLLDDIIAKGGKPNLVS-YNVLLTGLCKEGRTEEAIRFFRDLPSKGFE---------- 270
           A+++LD I+ + G   +   Y + +  L +     +A+   R L   GF           
Sbjct: 91  ALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLR 150

Query: 271 -------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
                   N+ S ++L+ +   EG+  +A   +  MD      ++ + N ++ +L    K
Sbjct: 151 TISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINK 210

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-PNEGTYN 382
           +++    L E +  +F     + N ++  LC++GK+      L +M  + C+ PN  TYN
Sbjct: 211 SEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYN 268

Query: 383 G-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLLYEMT 439
             L      G+ + A  I+  +  ++N    + Y Y  +I  LC+  ++ +A+ LL  M 
Sbjct: 269 TILNWYVKKGRCKSALRILDDM--EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMR 326

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           +   TPD  +Y++LI G   EG I  A+ IF  M     KP V  + AL+ G C++ RTD
Sbjct: 327 EVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTD 386

Query: 500 --------------------LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
                                + ++ + M+  G  P+  TY+ L+ G+     +  + E+
Sbjct: 387 EARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 446

Query: 540 LKELQ 544
           L  +Q
Sbjct: 447 LSRMQ 451



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 6/189 (3%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            + + R   ++ AF   E M + G  P  V  ++++  LCK  K+++AI V   ++ +G++
Sbjct: 820  NAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV 879

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P  +++T L++ LCK+  +  A  L + ME  G   + VTYN L+ GLC    +  +L  
Sbjct: 880  PTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDL 939

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             + +  KGL+PN  TY  L  A Y    +    KLL DI  +G  P+      L      
Sbjct: 940  YEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESL------ 993

Query: 251  EGRTEEAIR 259
            E R E AI+
Sbjct: 994  EWRMENAIK 1002


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 208/432 (48%), Gaps = 8/432 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A+  L+ M      P+++    ++  LCKA K+++A K+ E     G  PD  +Y 
Sbjct: 137 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 196

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L KKG V  A +L EKM D G+  N V Y SL+R   + G      +    LI++
Sbjct: 197 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+    +  ++  +K   V     + +DI + G  P++ SY++L+ GL K G+  E 
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 316

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +  +GF  +  +YN ++   C  G+  +A E+L EM      PT+ TY  ++  
Sbjct: 317 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 376

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           LA   + D A  + +E        +   Y+ +I      G++D     L++M  +   PN
Sbjct: 377 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 436

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQL 434
             T+N L   L    ++ EA    QS+  K+   P   Y Y  +I  LCR  K  +AF  
Sbjct: 437 VYTWNSLLDALVKAEEINEALVCFQSM--KEMKCPPNTYTYSILINGLCRVQKYNKAFVF 494

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             +M K G  P+  TY+++I GL   G I +A  +F   +     PD  +FNAL+ G+  
Sbjct: 495 WQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 554

Query: 495 SRRTDLSLEVFQ 506
           + R   ++E +Q
Sbjct: 555 ANR---AMEAYQ 563



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 222/452 (49%), Gaps = 2/452 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA+  LER+  +G  P VV   ++L  L K  K+ +A+ + E+M      P++S+Y 
Sbjct: 68  RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYN 126

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LC  G V  A +++++ME      N +T N +V  LC    L ++ +  +   Q+
Sbjct: 127 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 186

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+  TY  L++   K+  V  A +L + ++  G   N V Y  L+      GR E+ 
Sbjct: 187 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 246

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F++L  +G +P++   N  +  +   G  E+   +  ++      P + +Y+ILI  
Sbjct: 247 HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 306

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+      +   M +  F   A +YN ++   C  GKV    + L++M  +  +P 
Sbjct: 307 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 366

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  +   L  + ++ EA+ + +   +K        Y  +I    + G+  +A+ +L 
Sbjct: 367 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 426

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G TP+ YT++SL+  L     I EAL  F  M+E    P+   ++ L+ GLC+ +
Sbjct: 427 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQ 486

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           + + +   +Q M ++G +PN  TYT ++ G+A
Sbjct: 487 KYNKAFVFWQDMQKQGLVPNVVTYTTMISGLA 518



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 206/428 (48%), Gaps = 2/428 (0%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A K    + + G+ PD  SYT ++  LCK G +G A +L  +ME          YN+++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           G    G    + + L+RL ++G +P+  +++ +L    K+R V  A+ L  +++ K  +P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N  +YN+++  LC  GR EEA R   ++      PN+++ NI++  LC   + EEA ++ 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
                   +P  VTY  LI  L   G+ D A ++ ++M+      +   Y  +I      
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           G+ +   K   ++  R CKP+    N  +  +   G+V++   I + + +         Y
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I  L + G+  +   + + M + GF  D+  Y++++ G C  G + +A EI   M+E
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              +P V  + A++ GL K  R D +  +F+    KG   N   Y+ L++G      ++ 
Sbjct: 361 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDE 420

Query: 536 SAEVLKEL 543
           +  +L+E+
Sbjct: 421 AYLILEEM 428



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 223/504 (44%), Gaps = 37/504 (7%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKM--------------------------- 114
           A+     + ++G KPD V  T++++ LCKA ++                           
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 115 --------KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT 166
                   + A K++E +   G IP   S+  ++ CL KK  V  A+ L E M+    P 
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP- 120

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N+ TYN ++  LC+ G + ++ + LD +    L PN  T + +++   K R +  A K+ 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           +    +G  P+ V+Y  L+ GL K+G+ +EA R F  +   G   N V Y  L+R+  + 
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GR E+ +++  E+      P +   N  +  +   G+ +    + +++    F P   SY
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
           + +I  L   G+          M  +    +   YN +    C  GKV +A+ I++ +  
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K        Y  ++  L +  +  +A+ L  E    G   +   YSSLI G    G I+E
Sbjct: 361 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDE 420

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A  I   M +    P+V  +N+LL  L K+   + +L  FQ M E    PN  TY+IL+ 
Sbjct: 421 AYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILIN 480

Query: 526 GIAHQDELELSAEVLKELQLRQVV 549
           G+    +   +    +++Q + +V
Sbjct: 481 GLCRVQKYNKAFVFWQDMQKQGLV 504



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 3/119 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++N+A +  + M      P+    + L+  LC+  K  KA    + M   G++
Sbjct: 445 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 504

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           P+  +YT +++ L K GN+  A  L E+ +  G   +  ++N+L+ G   + N N++++
Sbjct: 505 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG---MSNANRAME 560


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 229/479 (47%), Gaps = 9/479 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + ++A+  L +M ++G KPDV+  T L+  LC A ++  A  V   M  S   PD  +Y 
Sbjct: 280 RFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI 339

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++     G+    M++   M+  GY  N V Y +++  LC +G + ++L+  D + QK
Sbjct: 340 TLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK 399

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+VP  ++Y+ L+    K      A++L   +   G KPN  ++ + +    K G + +A
Sbjct: 400 GIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKA 459

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I+ +  + SKG  P+VV+ N +L  L   GR   A  +  E+     SP  +TY ++I  
Sbjct: 460 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKC 519

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +   K D A+K+  +M++    P   + N +I  L   G+ D   +   Q+     +P 
Sbjct: 520 CSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPT 579

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           +GTYN  LA L   GKV+E   +++ + +         Y  ++  LC+ G    A  +LY
Sbjct: 580 DGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLY 639

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            MT  G  PD  +Y+++I GL  E    EA  IF  M++    PD      +L    K  
Sbjct: 640 SMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIG 698

Query: 497 RTDLSLEVFQ-MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
               +L + +   ++ G   + ++   L+EGI  +  +E      K ++  ++++ S +
Sbjct: 699 LMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE------KSIEFAEIIASSGI 751



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 228/498 (45%), Gaps = 40/498 (8%)

Query: 86  LERMVSKGHKPDVVQAT---NLLYDLCKAN-KMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           LER  S   KP V   T   N + +L + + ++    +V ++M    +  +  ++  +  
Sbjct: 109 LERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFG 168

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            L  +G +  A   +  M++ G   N  TYN LV  L   G   ++L+    ++  G+VP
Sbjct: 169 GLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVP 228

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TYS L+ A  K R V   + LL ++ A G KPN+ SY + +  L +  R +EA R  
Sbjct: 229 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 288

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             + ++G +P+V+++ +L++ LC  GR  +A ++  +M   D+ P  VTY  L+     +
Sbjct: 289 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 348

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G +   +++ + M    +  +  +Y  +I  LC  G+V   ++  D+M  +   P + +Y
Sbjct: 349 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 408

Query: 382 N----GLAMLCGVGKVQEAFAIIQSLGNKQNS---------------SPQEFYKY----- 417
           N    G       G   E F  +   G K N                S +   +Y     
Sbjct: 409 NSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKS 468

Query: 418 ------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                       V+  L + G+   A ++ +E+   G +PD+ TY+ +I+        +E
Sbjct: 469 KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 528

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A++IF  M E +  PDV   N+L+  L K+ R D +  +F  + E    P + TY  L+ 
Sbjct: 529 AVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLA 588

Query: 526 GIAHQDELELSAEVLKEL 543
           G+  + +++    +L+E+
Sbjct: 589 GLGREGKVKEVMHLLEEM 606



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 222/499 (44%), Gaps = 38/499 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A    + M  KG  P+     +L+    KA++   A+++ + M   G  P+  ++ 
Sbjct: 385 RVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHV 444

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             +N   K G    A+Q  E M+  G   + V  N+++ GL   G L  + +    L   
Sbjct: 445 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 504

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+  TY+ +++   K      A+K+  D+I     P++++ N L+  L K GR +EA
Sbjct: 505 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEA 564

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R F  L     EP   +YN LL  L  EG+ +E   LL EM   +  P ++TYN ++  
Sbjct: 565 WRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDC 624

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  +G  + AL +L  M      P  +SYN +I  L  E + +       QM  +   P+
Sbjct: 625 LCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPD 683

Query: 378 EGTY-NGLAMLCGVGKVQEAFAIIQSL----GNKQNSSPQ-----------------EFY 415
             T    L     +G ++EA  II+      G+K + S                   EF 
Sbjct: 684 YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 743

Query: 416 KYVITS---------------LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + + +S               LC++ K  +A +L+ +   +G +  +  Y+SLI GL  E
Sbjct: 744 EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDE 803

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            LI+ A  +F  M+E    PD   +N LL  + KS R +  L+V + M  KG      TY
Sbjct: 804 NLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY 863

Query: 521 TILVEGIAHQDELELSAEV 539
             ++ G+     LE + ++
Sbjct: 864 NTIISGLVKSRRLEQAIDL 882



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 218/484 (45%), Gaps = 49/484 (10%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F +L+ M   G  PD +  T ++    KA+K  +A+K+   M+ +  +PD  +   L++ 
Sbjct: 498 FHELKAM---GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDT 554

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           L K G    A ++  ++++        TYN+L+ GL   G + + +  L+ +      PN
Sbjct: 555 LYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPN 614

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ +L+   K   V+ A+ +L  +  KG  P+L SYN ++ GL KE R  EA   F 
Sbjct: 615 LITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFC 674

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE--MDGGDRSPTIVTYNILIGSLAY 320
            +  K   P+  +   +L S    G  +EA  ++ +  +  G ++     ++++ G L  
Sbjct: 675 QM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKK 733

Query: 321 HG-------------------------------KTDHALKVLDEMVKGRFRPSAAS---- 345
            G                               K   AL+   E+VK +F+    S    
Sbjct: 734 AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA-HELVK-KFKSFGVSLKTG 791

Query: 346 -YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQ 401
            YN +I  L  E  +D+      +M    C P+E TYN   +L  +GK   ++E   + +
Sbjct: 792 LYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYN--LLLDAMGKSMRIEEMLKVQE 849

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  K   S    Y  +I+ L +  +  QA  L Y +   GF+P   TY  L+ GL   G
Sbjct: 850 EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 909

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            IE+A  +F  M EY  K +   +N LL G   +  T+    +FQ M+++G  P+  +YT
Sbjct: 910 RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 969

Query: 522 ILVE 525
           I+++
Sbjct: 970 IIID 973



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 223/493 (45%), Gaps = 44/493 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  A + L  M   G   +      L+Y L K+   ++A++V  +M+  G++P   +Y+ 
Sbjct: 176 LRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSV 235

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+    K+ +V   + L+ +ME +G   N  +Y   +R L      +++ + L ++  +G
Sbjct: 236 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG 295

Query: 199 LVPNAFTYSFLLEA----------------------------------AYKERG-VHAAM 223
             P+  T++ L++                                    + + G   + M
Sbjct: 296 CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVM 355

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           ++ + + A G   N+V+Y  ++  LC+ GR  EA+  F ++  KG  P   SYN L+   
Sbjct: 356 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGF 415

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD--EMVKGR-FR 340
               R+ +A EL   MD     P   T+ + I    Y+GK+  ++K +   E++K +   
Sbjct: 416 LKADRFGDALELFKHMDIHGPKPNGYTHVLFIN---YYGKSGESIKAIQRYELMKSKGIV 472

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAI 399
           P   + N ++  L   G++ +  +   ++      P+  TY  +   C    K  EA  I
Sbjct: 473 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 532

Query: 400 IQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
              +  + N  P       +I +L + G+  +A+++ Y++ +    P   TY++L+ GL 
Sbjct: 533 FYDM-IENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLG 591

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            EG ++E + +   M   +Y P++  +N +L  LCK+   + +L++   M  KG +P+ +
Sbjct: 592 REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 651

Query: 519 TYTILVEGIAHQD 531
           +Y  ++ G+  ++
Sbjct: 652 SYNTVIYGLVKEE 664



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 212/464 (45%), Gaps = 3/464 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A  + E M SKG  PDVV    +L+ L K+ ++  A +V   + + G+ PD  +YT ++ 
Sbjct: 459 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 518

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
           C  K      A+++   M +     + +  NSL+  L   G  +++ +   +L +  L P
Sbjct: 519 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 578

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
              TY+ LL    +E  V   M LL+++      PNL++YN +L  LCK G   +A+   
Sbjct: 579 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 638

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             + +KG  P++ SYN ++  L  E R+ EA  +  +M      P   T   ++ S    
Sbjct: 639 YSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLCTILPSFVKI 697

Query: 322 GKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           G    AL ++ D  ++   +   +S + ++  +  +  ++  ++  + +       ++  
Sbjct: 698 GLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFF 757

Query: 381 YNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
              L   LC   K  EA  +++   +   S     Y  +I  L  +     A  L  EM 
Sbjct: 758 LCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMK 817

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + G  PD +TY+ L+  +     IEE L++   M    Y+     +N ++ GL KSRR +
Sbjct: 818 ELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLE 877

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +++++  ++ +G  P   TY  L++G+     +E +  +  E+
Sbjct: 878 QAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 921



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 192/427 (44%), Gaps = 34/427 (7%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +S  Y++  +   G VG   ++ + M+      N  T+ ++  GL + G L  +   L  
Sbjct: 126 ASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPV 185

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + + G+V NA+TY+ L+    K      A+++   ++  G  P++ +Y+VL+    K   
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 245

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            E  +   R++ + G +PNV SY I +R L    R++EA  +LA+M+     P ++T+ +
Sbjct: 246 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 305

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+   A  V  +M K   +P   +Y  ++ +    G                
Sbjct: 306 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ------------- 352

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
                              V E +  +++ G   N      Y  VI +LC+ G+ ++A +
Sbjct: 353 ------------------SVMEIWNAMKADGYNDNVVA---YTAVIDALCQVGRVFEALE 391

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  EM + G  P+ Y+Y+SLI G        +ALE+F  M+ +  KP+       +    
Sbjct: 392 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 451

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           KS  +  +++ +++M  KG +P+      ++ G+A    L ++  V  EL+   V  ++ 
Sbjct: 452 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 511

Query: 554 VERLVMQ 560
              ++++
Sbjct: 512 TYTMMIK 518



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 143/316 (45%), Gaps = 8/316 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  +NDA   L  M +KG  PD+     ++Y L K  +  +A  +   M    +I
Sbjct: 623 DCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLI 681

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY----GYPTNTVTYNSLVRGLCMLGNLNQ 186
           PD ++   ++    K G +  A+ +++   DY    G  T+  + +SL+ G+     + +
Sbjct: 682 PDYATLCTILPSFVKIGLMKEALHIIK---DYFLQPGSKTDRSSCHSLMEGILKKAGIEK 738

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           S++F + +   G+  + F    L++   K++    A +L+    + G       YN L+ 
Sbjct: 739 SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 798

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           GL  E   + A   F ++   G  P+  +YN+LL ++    R EE  ++  EM       
Sbjct: 799 GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 858

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           T VTYN +I  L    + + A+ +   ++   F P+  +Y P++  L   G+++      
Sbjct: 859 TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF 918

Query: 367 DQMFHRRCKPNEGTYN 382
           ++M    CK N   YN
Sbjct: 919 NEMLEYGCKANCTIYN 934



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 41/274 (14%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H + D FLQ       G K D     +L+  + K   ++K+I+  E++ SSGI  D    
Sbjct: 705 HIIKDYFLQ------PGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFL 758

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+  LCK+     A +LV+K + +G    T  YNSL+ GL     ++ +      + +
Sbjct: 759 CPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKE 818

Query: 197 KGLVPNAFTYSFLLEAA-----------------------------------YKERGVHA 221
            G  P+ FTY+ LL+A                                     K R +  
Sbjct: 819 LGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ 878

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+ L  +++++G  P   +Y  LL GL K GR E+A   F ++   G + N   YNILL 
Sbjct: 879 AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 938

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
              + G  E+   L  +M     +P I +Y I+I
Sbjct: 939 GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 68/141 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++ +     E M  KG++   V    ++  L K+ ++++AI +   ++S G  
Sbjct: 833 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 892

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +Y  L++ L K G +  A  L  +M +YG   N   YN L+ G  + GN  +    
Sbjct: 893 PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 952

Query: 191 LDRLIQKGLVPNAFTYSFLLE 211
              ++ +G+ P+  +Y+ +++
Sbjct: 953 FQDMVDQGINPDIKSYTIIID 973


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 213/465 (45%), Gaps = 37/465 (7%)

Query: 65  KPGNNNDTRHRDHKLNDAFLQ---LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM 121
           KP + N   HR  K+    L     + M + G K  V     ++  LCK   ++ A  + 
Sbjct: 219 KPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLF 278

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
             M  +G  PD  +Y  L++   K G +   + + E+M+D     + +TYN+L+   C  
Sbjct: 279 TQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKF 338

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
             + ++ +FL  +   GL PN  TYS  ++A  KE  +  A+K   D+      PN  +Y
Sbjct: 339 ERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTY 398

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             L+   CK G   EA++   ++   G + NVV+Y  LL  LC EGR +EA E+   M  
Sbjct: 399 TSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN 458

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P   TY  L+       + ++A  +L EM +   +P    Y  I+  LC+E     
Sbjct: 459 AGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE----- 513

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
                                         +++EA  +I  +     ++    Y  ++ +
Sbjct: 514 -----------------------------SRLEEAKLLIGEIKESGINTNAVIYTTLMDA 544

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
             + G+  +A  LL EM   G      TY +LI GLC  GL++EA+  F  M E   +P+
Sbjct: 545 YFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPN 604

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           V  + AL+ GLCK+   +++ ++F  M++KG MP++  YT L++G
Sbjct: 605 VAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDG 649



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 223/467 (47%), Gaps = 7/467 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M   G  PD+V   +L+    K   + + I + E M  +   PD  +Y  L+NC CK  
Sbjct: 280 QMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFE 339

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A + + +M+  G   N VTY++ +   C  G L ++++F   + +  L PN FTY+
Sbjct: 340 RMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++A  K   +  A+KL+++I+  G K N+V+Y  LL GLC+EGR +EA   FR + + 
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  PN  +Y  L+         E A ++L EM      P ++ Y  ++  L    + + A
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
             ++ E+ +     +A  Y  ++      G+    +  L++M        E TY  L   
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDG 579

Query: 387 LCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           LC  G VQEA   F  +  +G + N +    Y  ++  LC+      A +L  EM   G 
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVA---VYTALVDGLCKNNCFEVAKKLFDEMLDKGM 636

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD   Y++LI G    G ++EAL +   M E   + D+  + AL+ GL  S +   +  
Sbjct: 637 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARN 696

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           +   MI KG +P+E  Y  L++      +++ + E+  E+  R +++
Sbjct: 697 LLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 743



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 185/395 (46%), Gaps = 5/395 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  AF  L  M + G KP+VV  +  +   CK   +++AIK    M    + P+  +YT
Sbjct: 340 RMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK GN+  A++LVE++   G   N VTY +L+ GLC  G + ++ +    ++  
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  TY+ L+    K + +  A  +L ++  K  KP+L+ Y  +L GLC E R EEA
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++   G   N V Y  L+ +    G+  EA  LL EM       T VTY  LI  
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDG 579

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G    A+     M +   +P+ A Y  ++  LC     ++  K  D+M  +   P+
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639

Query: 378 EGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           +  Y   A++ G    G +QEA  +   +           Y  +I  L   G+  +A  L
Sbjct: 640 KIAYT--ALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNL 697

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           L EM   G  PD   Y  LI+     G ++EALE+
Sbjct: 698 LDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 732



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 172/362 (47%), Gaps = 14/362 (3%)

Query: 49  QVTISPKDSVYTK---PNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLL 105
           +V ++P +  YT     N K GN          L +A   +E ++  G K +VV  T LL
Sbjct: 388 RVALTPNEFTYTSLIDANCKAGN----------LAEALKLVEEILQAGIKLNVVTYTALL 437

Query: 106 YDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYP 165
             LC+  +MK+A +V   M+++G+ P+  +YT LV+   K   + YA  ++++M++    
Sbjct: 438 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 497

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            + + Y +++ GLC    L ++   +  + + G+  NA  Y+ L++A +K      A+ L
Sbjct: 498 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 557

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           L++++  G     V+Y  L+ GLCK G  +EA+  F  +   G +PNV  Y  L+  LC 
Sbjct: 558 LEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK 617

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
              +E A +L  EM      P  + Y  LI     HG    AL + D M++        +
Sbjct: 618 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 677

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG 404
           Y  +I  L   G+V      LD+M  +   P+E  Y  L      +GKV EA  +   + 
Sbjct: 678 YTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMA 737

Query: 405 NK 406
            +
Sbjct: 738 KR 739



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 183/400 (45%), Gaps = 1/400 (0%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P    +  L + L + G +  A +   KM  +       + N+L+  L  +G  + S +
Sbjct: 182 VPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRK 241

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           F   +   G+  + FTY+ +++   KE  +  A  L   +   G  P++V+YN L+ G  
Sbjct: 242 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 301

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G  +E I  F  +     +P+V++YN L+   C   R  +A E L EM      P +V
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY+  I +    G    A+K   +M +    P+  +Y  +I   C  G +   +K ++++
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                K N  TY  L   LC  G+++EA  + +++ N   +  QE Y  ++    +  + 
Sbjct: 422 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEM 481

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A  +L EM +    PD   Y +++ GLC E  +EEA  +   ++E     +   +  L
Sbjct: 482 EYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTL 541

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +    KS +   +L + + M++ G +  E TY  L++G+ 
Sbjct: 542 MDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLC 581



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 165/331 (49%), Gaps = 3/331 (0%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P   S N LL  L K GR + + +FF+D+ + G + +V +YNI++  LC EG  E A  L
Sbjct: 218 PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 277

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             +M     +P IVTYN LI      G  D  + + ++M      P   +YN +I   C 
Sbjct: 278 FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 337

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
             ++    + L +M     KPN  TY+  +   C  G +QEA      +  +   +P EF
Sbjct: 338 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM-RRVALTPNEF 396

Query: 415 -YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I + C+ G   +A +L+ E+ + G   +  TY++L+ GLC EG ++EA E+F  M
Sbjct: 397 TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 456

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
                 P+ + + AL+ G  K++  + + ++ + M EK   P+   Y  ++ G+ ++  L
Sbjct: 457 LNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRL 516

Query: 534 ELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           E +  ++ E++   + + + +   +M   F+
Sbjct: 517 EEAKLLIGEIKESGINTNAVIYTTLMDAYFK 547



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 95/198 (47%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +  +A   LE M+  G     V    L+  LCK+  +++A+     M   G+ 
Sbjct: 543 DAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQ 602

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+ + YT LV+ LCK      A +L ++M D G   + + Y +L+ G    GNL ++L  
Sbjct: 603 PNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 662

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            DR+I+ G+  +   Y+ L+        V  A  LLD++I KG  P+ V Y  L+     
Sbjct: 663 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA 722

Query: 251 EGRTEEAIRFFRDLPSKG 268
            G+ +EA+    ++  +G
Sbjct: 723 LGKVDEALELQNEMAKRG 740



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 1/117 (0%)

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
           ++  F LL+  T+    P    + +L   L   G++EEA E F+ M ++   P   + NA
Sbjct: 167 SWDVFDLLWA-TRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNA 225

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           LL  L K  R DLS + F+ M   G   +  TY I+++ +  + +LE++  +  +++
Sbjct: 226 LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMK 282



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 47/96 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L +A    +RM+  G + D+   T L++ L  + +++KA  +++ M+  G++
Sbjct: 648 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 707

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT 166
           PD   Y  L+      G V  A++L  +M   G  T
Sbjct: 708 PDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 743


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 210/452 (46%), Gaps = 37/452 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDA 133
           +   L+ +      MV KG  P      NLL  +  ++   +      E  +   ++ D 
Sbjct: 106 QSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK--VVLDV 163

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+  ++   C+ G +  +  L+ ++ ++G+  N V Y +L+ G C  G + ++      
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + + GLV N +TY+ L+   +K        ++ + +   G  PNL +YN ++  LCK+GR
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGR 283

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T++A + F ++  +G   N+V+YN L+  LC E +  EANE++ +M     +P ++TYN 
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI       K   AL +  ++      PS  +YN +++  C +G      K + +M  R 
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            KP++ TY  L                                  I +  R     +A Q
Sbjct: 404 IKPSKVTYTIL----------------------------------IDTFARSDNMEKAIQ 429

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   M + G TPD +TYS LI G C++G + EA  +F  M E  ++P+   +N ++LG C
Sbjct: 430 LRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYC 489

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           K   +  +L +F+ M EK   PN  +Y  ++E
Sbjct: 490 KEGSSYRALRLFREMEEKELPPNVASYRYMIE 521



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 182/354 (51%), Gaps = 1/354 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P+VV  T L+   CK  +++KA  +   M   G++ +  +YT L++ L K G     
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQG 252

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            ++ EKM+++G   N  TYN ++  LC  G    + +  D + ++G+  N  TY+ L+  
Sbjct: 253 FEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGG 312

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             +E   + A +++D + + G  PNL++YN L+ G C   +  +A+   RDL S+G  P+
Sbjct: 313 LCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPS 372

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           +V+YNIL+   C +G    A +++ EM+     P+ VTY ILI + A     + A+++  
Sbjct: 373 LVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRS 432

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
            M +    P   +Y+ +I   C +G+++   +    M  ++ +PNE  YN + +  C  G
Sbjct: 433 SMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEG 492

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
               A  + + +  K+       Y+Y+I  LC++ K+ +A  L+ +M   G  P
Sbjct: 493 SSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGP 546



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 185/380 (48%), Gaps = 8/380 (2%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           DV     ++   C+A +++K+  ++  +   G  P+   YT L++  CKKG +  A  L 
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
            +M  +G   N  TY  L+ GL   G   Q  +  +++ + G+ PN  TY+ ++    K+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
                A K+ D++  +G   N+V+YN L+ GLC+E +  EA      + S G  PN+++Y
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N L+   C   +  +A  L  ++     SP++VTYNIL+      G T  A KV+ EM +
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQE 395
              +PS  +Y  +I        ++  ++    M      P+  TY+ L    C  G++ E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNE 461

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  + +S+  K+    +  Y  ++   C++G +Y+A +L  EM +    P+  +Y  +I 
Sbjct: 462 ASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521

Query: 456 GLC-------MEGLIEEALE 468
            LC        EGL+E+ ++
Sbjct: 522 VLCKERKSKEAEGLVEKMID 541



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 205/426 (48%), Gaps = 2/426 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  ++N   +  ++  ++    +M D G+   +  +N+L+  +    + NQ   F +   
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            K +V + +++  +++   +   +  +  LL ++   G  PN+V Y  L+ G CK+G  E
Sbjct: 157 IK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A   F ++   G   N  +Y +L+  L   G  ++  E+  +M      P + TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G+T  A KV DEM +     +  +YN +I  LC E K +   + +DQM      
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN  TYN L    CGV K+ +A ++ + L ++  S     Y  +++  C+KG T  A ++
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + EM + G  P   TY+ LI        +E+A+++   MEE    PDV  ++ L+ G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             R + +  +F+ M+EK   PNE  Y  +V G   +     +  + +E++ +++    A 
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 555 ERLVMQ 560
            R +++
Sbjct: 516 YRYMIE 521



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 157/314 (50%), Gaps = 11/314 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +  DAF   + M  +G   ++V    L+  LC+  K  +A +VM+ M S GI P+  
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLI 339

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  C    +G A+ L   ++  G   + VTYN LV G C  G+ + + + +  +
Sbjct: 340 TYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P+  TY+ L++   +   +  A++L   +   G  P++ +Y+VL+ G C +GR 
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRM 459

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA R F+ +  K FEPN V YN ++   C EG    A  L  EM+  +  P + +Y  +
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K+  A  ++++M+     PS +     I  L S  K D   + +D+      
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDSGIGPSDS-----ILNLISRAKNDSHSRSMDEE----- 569

Query: 375 KPNEGTYNGLAMLC 388
           +P    ++GL M+C
Sbjct: 570 EPASMVFDGL-MVC 582



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 146/301 (48%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            F   E+M   G  P++     ++  LCK  + K A KV + M   G+  +  +Y  L+ 
Sbjct: 252 GFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LC++     A +++++M+  G   N +TYN+L+ G C +  L ++L     L  +GL P
Sbjct: 312 GLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ L+    K+     A K++ ++  +G KP+ V+Y +L+    +    E+AI+  
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G  P+V +Y++L+   C++GR  EA+ L   M      P  V YN ++      
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G +  AL++  EM +    P+ ASY  +I  LC E K       +++M      P++   
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSIL 551

Query: 382 N 382
           N
Sbjct: 552 N 552



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 61/132 (46%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  R   +  A      M   G  PDV   + L++  C   +M +A ++ + MV     
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFE 475

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  +V   CK+G+   A++L  +ME+   P N  +Y  ++  LC      ++   
Sbjct: 476 PNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGL 535

Query: 191 LDRLIQKGLVPN 202
           ++++I  G+ P+
Sbjct: 536 VEKMIDSGIGPS 547


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 232/477 (48%), Gaps = 4/477 (0%)

Query: 81  DAFLQLER-MVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           D  L+L++ M  KG  P   Q+ NLL D LCK  +++ A  ++  M S G+  D  +Y+ 
Sbjct: 262 DEALELKKSMSCKGLVPSR-QSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ L K  N   A  LV +M  +G+  + + Y+  +  +   G + ++    D +I  G
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P A  Y+ L+E  ++E+ V    +LL +I  +    +  +Y   + G+C  G  + A 
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
              +++ + G  PNVV Y  L+++   + R+ +A  +L EM     +P    YN LI  L
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGL 500

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
           +   K D A   L EMV+  F+P A +Y   I+     G+     K + +M      PN+
Sbjct: 501 SKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNK 560

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
               GL    C  GKV EA +  +S+  +      + Y  ++  L + GK   A ++ +E
Sbjct: 561 VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHE 620

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD ++Y +LI G    G +++A  IF  M +     +V  +N LL G C+S  
Sbjct: 621 MRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGE 680

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            + + E+   M  KG  PN  TY  +++G     +L  + ++  E++L+ +V +S V
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFV 737



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 207/442 (46%), Gaps = 41/442 (9%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           +C +  +  A  +++ M +SG  P+   YT L+    +K   G A++++++M + G   +
Sbjct: 430 MCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPD 489

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA-AMKLL 226
           T  YNSL+ GL     ++++  FL  +++ G  P+AFTY   + + Y E G  A A K +
Sbjct: 490 TFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFI-SGYIEAGEFASADKYV 548

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            +++  G  PN V    L+   CK+G+  EA   FR +  +G   +  +Y +L+  L   
Sbjct: 549 KEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKN 608

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G+  +A E+  EM G   +P + +Y  LI   +  G    A  + DEMV+     +   Y
Sbjct: 609 GKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIY 668

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
           N ++   C  G+++   + LD+M  +   PN  TY      C                  
Sbjct: 669 NMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTY------C------------------ 704

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                      +I   C+ G   +AFQL  EM   G  PDS+ Y++L+ G C    +E A
Sbjct: 705 ----------TIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 754

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI----EKGQMPNETTYTI 522
           + IF   E+         FNAL+  + K  +T+L+ ++   ++    +K   PN+ TY I
Sbjct: 755 ITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813

Query: 523 LVEGIAHQDELELSAEVLKELQ 544
           +++ +  +  LE + E+   +Q
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQ 835



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 226/482 (46%), Gaps = 11/482 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+ A+  ++ M + G +P+VV  T L+    + ++   A++V++ M   GI PD   Y  
Sbjct: 436 LDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNS 495

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L K   +  A   + +M + G+  +  TY + + G    G    + +++  +++ G
Sbjct: 496 LIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECG 555

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++PN    + L+    K+  V  A      ++ +G   +  +Y VL+ GL K G+  +A 
Sbjct: 556 VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAE 615

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F ++  KG  P+V SY  L+      G  ++A+ +  EM     +  ++ YN+L+G  
Sbjct: 616 EIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGF 675

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+ + A ++LDEM    F P+A +Y  II   C  G +    +  D+M  +   P+ 
Sbjct: 676 CRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDS 735

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             Y  L    C +  V+ A  I ++   K  +S    +  +I  + + GKT     ++  
Sbjct: 736 FVYTTLVDGCCRLNDVERAITIFET-NEKGCASSSAPFNALINWVFKFGKTELTTDMINR 794

Query: 438 MTKYGF----TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +    F     P+  TY+ +I  LC EG +E A E+F  M++ +  P V  + +LL G  
Sbjct: 795 LMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYD 854

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K  R      VF  +I  G  P+   Y++++     ++ +   A VL    L Q+ +++A
Sbjct: 855 KMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFL-KEGMTTKALVL----LDQMFAKNA 909

Query: 554 VE 555
           V+
Sbjct: 910 VD 911



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 218/492 (44%), Gaps = 12/492 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA   L+ M  +G  PD     +L+  L KA KM +A   +  MV +G  PDA +Y 
Sbjct: 470 RFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYG 529

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             ++   + G    A + V++M + G   N V    L+   C  G + ++      ++++
Sbjct: 530 AFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQ 589

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++ +A TY+ L+    K   V+ A ++  ++  KG  P++ SY  L+ G  K G  ++A
Sbjct: 590 GILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA 649

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F ++   G   NV+ YN+LL   C  G  E+A ELL EM G    P  VTY  +I  
Sbjct: 650 SSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDG 709

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A ++ DEM      P +  Y  ++   C    V+  +   +    + C  +
Sbjct: 710 YCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN-EKGCASS 768

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGN---KQNSSPQEF-YKYVITSLCRKGKTYQAF 432
              +N L   +   GK +    +I  L +    +   P +  Y  +I  LC++G    A 
Sbjct: 769 SAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAK 828

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L + M K    P   TY+SL+ G    G   E   +F  +     +PD   ++ ++   
Sbjct: 829 ELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAF 888

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTI-----LVEGIAHQDELELSAEVLKEL-QLR 546
            K   T  +L +   M  K  + +    +I     L+ G A   E+E++ +V++ + +L+
Sbjct: 889 LKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLK 948

Query: 547 QVVSESAVERLV 558
            +   S V  L+
Sbjct: 949 YIPDSSTVIELI 960



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 224/529 (42%), Gaps = 66/529 (12%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNL--------LYDLCKANKMKKAIKVMEM--MV 125
           + KL DA  ++  ++++G+  + + ++NL        +  + ++ ++    K++    +V
Sbjct: 28  NEKLPDASAEIAGILNQGNWRETLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNLV 87

Query: 126 SSGIIPDA--SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
            S  + +    S+++L   LC  G++  A  +V +M +  +P   V ++S+VR  C+   
Sbjct: 88  DSQKVTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEV-WSSIVR--CLREF 144

Query: 184 LNQS----LQF---LDRLIQKG------------------LVPNAFTYSFLLEAAYKERG 218
           + +S    L F   +D  I+KG                  LVP+    + LL+A  K   
Sbjct: 145 VGKSDDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNR 204

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG---------------------RTEEA 257
           +     +   ++ +    ++ SY +L+   C++G                       +EA
Sbjct: 205 LDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEA 264

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   + +  KG  P+  SYN+L+  LC + R E+A  LL EM+        V Y+ILI  
Sbjct: 265 LELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDG 324

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L      D A  ++ EMV   F      Y+  I  +  EG ++      D M      P 
Sbjct: 325 LLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPG 384

Query: 378 EGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
              Y  L  + G  +   V++ + ++  +  +        Y   +  +C  G    A+ +
Sbjct: 385 ARAYASL--IEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNI 442

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + EM   G  P+   Y++LI+    +    +A+ +   M E    PD   +N+L++GL K
Sbjct: 443 VKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSK 502

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +++ D +      M+E G  P+  TY   + G     E   + + +KE+
Sbjct: 503 AKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM 551



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 43/258 (16%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM------- 123
           D   +   L +AF   + M  KG  PD    T L+   C+ N +++AI + E        
Sbjct: 708 DGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCAS 767

Query: 124 ------------------MVSSGII-------------PDASSYTYLVNCLCKKGNVGYA 152
                              +++ +I             P+  +Y  +++ LCK+GN+  A
Sbjct: 768 SSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAA 827

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            +L   M+        +TY SL+ G   +G  ++     D +I  G+ P+   YS ++ A
Sbjct: 828 KELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINA 887

Query: 213 AYKERGVHAAMKLLDDIIAK-----GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             KE     A+ LLD + AK     G K ++ +   LL+G  K G  E A +   ++   
Sbjct: 888 FLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRL 947

Query: 268 GFEPNVVSYNILLRSLCM 285
            + P+  +   L+   C+
Sbjct: 948 KYIPDSSTVIELINESCI 965


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 218/452 (48%), Gaps = 21/452 (4%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M+     PDVV    L++ LCK  K + A+ + + M   GI+P+   Y+ +++ LC+  
Sbjct: 188 QMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAK 247

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A +L  KM   G   + +TYN L+ G C  G L+ +   L  L + G +     Y 
Sbjct: 248 KIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYG 307

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+   ++ R    A      ++ +  KP+++ Y +++ GL +EGR  EA+    ++  +
Sbjct: 308 CLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+ + YN L++  C  G  +EA  L  E+   D  P   TY+ILI  +  +G  + A
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
             +  EM K    PS  ++N +I  LC   +++       QM   R KP+      L + 
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR-KPSL----FLRLS 482

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
            G  KV +    I SL            + ++  LC  G   +A++LL ++   G  PD 
Sbjct: 483 QGTDKVFD----IASL------------QVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ LI G C  G I  A ++F  M+   + PD   +  L+ GL ++ R + +LE+F+ 
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ 586

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           M++KG +P  +TY  ++     ++ + L+  V
Sbjct: 587 MVKKGCVPESSTYKTIMTWSCRENNISLALSV 618



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/503 (23%), Positives = 217/503 (43%), Gaps = 49/503 (9%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           L K N  +   KV++ + +S I   + +++ L+    + G    A++    M D+    +
Sbjct: 103 LIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPD 162

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
              +N ++  L        +L   +++++  L P+  TY  L+    K      A+ L D
Sbjct: 163 LFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFD 222

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           ++  +G  PN + Y+++L+GLC+  +  +A R F  + + G   ++++YN+LL   C  G
Sbjct: 223 EMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSG 282

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
             ++A  LL  +        ++ Y  LI  L    + + A     +M++   +P    Y 
Sbjct: 283 YLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYT 342

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            +I  L  EG+V   +  L +M  R  +P+   YN L    C +G + EA ++   +   
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  +I  +C+ G   +A  +  EM K G  P   T++SLI GLC    +EEA
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462

Query: 467 LEIFVVME-----------------EYD--------------------YK---------- 479
             +F  ME                  +D                    YK          
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGV 522

Query: 480 -PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PD+  +N L+ G CK    + + ++F+ M  KG MP+  TY  L++G+      E + E
Sbjct: 523 LPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALE 582

Query: 539 VLKELQLRQVVSESAVERLVMQY 561
           + +++  +  V ES+  + +M +
Sbjct: 583 IFEQMVKKGCVPESSTYKTIMTW 605



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/469 (24%), Positives = 209/469 (44%), Gaps = 22/469 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  DA +  + M  +G  P+ +  + +L  LC+A K+  A ++   M +SG   D  +Y 
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYN 272

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK G +  A  L++ +   G+    + Y  L+ GL       ++  +  +++++
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE 332

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+   Y+ ++    +E  V  A+ LL ++  +G +P+ + YN L+ G C  G  +EA
Sbjct: 333 NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA 392

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++      PN  +Y+IL+  +C  G   +A  +  EM+     P++VT+N LI  
Sbjct: 393 ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLING 452

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + + A  +  +M   R +PS      +  RL         +  L  M  R     
Sbjct: 453 LCKANRLEEARLLFYQMEIVR-KPS------LFLRLSQGTDKVFDIASLQVMMER----- 500

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                    LC  G + +A+ ++  L +         Y  +I   C+ G    AF+L  E
Sbjct: 501 ---------LCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKE 551

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PDS TY +LI GL   G  E+ALEIF  M +    P+   +  ++   C+   
Sbjct: 552 MQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENN 611

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             L+L V+   +   +   +    ++ E   ++ EL+ +   L E+ ++
Sbjct: 612 ISLALSVWMKYLRDFRGWEDEKVRVVAESFDNE-ELQTAIRRLLEMDIK 659



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 191/452 (42%), Gaps = 15/452 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  +A +  ++M+ +  KPDV+  T ++  L +  ++ +A+ ++  M   G+ PD  
Sbjct: 315 RARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTI 374

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+   C  G +  A  L  ++  +    N  TY+ L+ G+C  G +N++      +
Sbjct: 375 CYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEM 434

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL--------------VS 240
            + G +P+  T++ L+    K   +  A +LL   +    KP+L               S
Sbjct: 435 EKLGCLPSVVTFNSLINGLCKANRLEEA-RLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
             V++  LC+ G   +A +    L   G  P++ +YNIL+   C  G    A +L  EM 
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQ 553

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P  VTY  LI  L   G+ + AL++ ++MVK    P +++Y  I+   C E  + 
Sbjct: 554 LKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNIS 613

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           L +    +         +     +A      ++Q A   +  +  K  +     Y   + 
Sbjct: 614 LALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLI 673

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L +  +  +AF +   +  +     S +   LI  LCM   ++ A+++F+   E  ++ 
Sbjct: 674 GLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRL 733

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
                N LL  L    R D +L +   M   G
Sbjct: 734 MPPICNQLLCNLLHLDRKDDALFLANRMEASG 765



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 140/340 (41%), Gaps = 38/340 (11%)

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           ++++  L KE   E   +  ++L +   + +  ++++L+ +    G  E+A E  + M  
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
            D  P +  +N+++  L        AL V ++M+K    P   +Y  +I  LC   K   
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 362 VVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +   D+M  R   PN+  Y+  L+ LC   K+ +A  +   +     +     Y  ++ 
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 421 SLCRKGKTYQAFQLLYEMTKYG-----------------------------------FTP 445
             C+ G    AF LL  +TK G                                     P
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D   Y+ +IRGL  EG + EAL +   M E   +PD   +NAL+ G C     D   E  
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD-EAESL 395

Query: 506 QMMIEKGQ-MPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++ I K    PN  TY+IL+ G+     +  +  + KE++
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEME 435



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 69/142 (48%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  L ++      +++L E+        S  +S LI      G+ E+A+E F +M ++D
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            KPD+  FN +L  L +     L+L V+  M++    P+  TY IL+ G+    + + + 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 538 EVLKELQLRQVVSESAVERLVM 559
            +  E+  R ++    +  +V+
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVL 240


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 224/479 (46%), Gaps = 9/479 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +F    +++ +G+  D V    +L  LC    + KA++  + +V++G   +  SY  L+N
Sbjct: 91  SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILIN 150

Query: 142 CLCKKGNVGYAMQLVEKM--------EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            LC+ G V  A+ L+  +        + +    N V Y+ ++  LC  G +++  +F + 
Sbjct: 151 GLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNE 210

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++  G+ PN FTY  L+              L+D++I +G   ++  + VL+ GLCK G 
Sbjct: 211 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA   F ++ ++G+EPN+V+   L+   C++G  + A EL   +        + TYN+
Sbjct: 271 LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNV 330

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
            I      G+   A++V DEM +    P+  +YN +I  LC  G+V    + +  M    
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P+  T   L   LC   ++ +A  +   L     +     Y  +I   C   +  +A 
Sbjct: 391 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAM 450

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            LL +M      P   TYS LI GLC  G I  A  +   M      PD   ++ LL  L
Sbjct: 451 NLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDAL 510

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            K +  D ++ +F  MI++G  P+   YTI+++G    + ++ +  + +E+ ++ +V +
Sbjct: 511 WKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPD 569



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 218/484 (45%), Gaps = 77/484 (15%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--------IIPDASSYTY 138
           + +V+ G   + V    L+  LC+  ++ +A+ ++ M+            +  +   Y+ 
Sbjct: 131 DEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSI 190

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++CLC+ G V    +   +M   G   N  TY SL+RGLC +G   +    +D +I++G
Sbjct: 191 VIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRG 250

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS------------------ 240
           L  + + ++ L++   K   +  A ++ D+++ +G +PN+V+                  
Sbjct: 251 LDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAR 310

Query: 241 -----------------YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                            YNV + G CK GR  +A+R F ++  +G  PN+V+YN L+  L
Sbjct: 311 ELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCL 370

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G    A E++  M     +P IVT  IL+  L    + D A+ + +++V+    P  
Sbjct: 371 CKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDV 430

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL 403
            SY  +I   C+  ++   +  L  M  +   P+  TY+ L                   
Sbjct: 431 WSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCL------------------- 471

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                          I  LCR G+   A++LL EM   G  PD+ TYS L+  L  +  +
Sbjct: 472 ---------------IDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHL 516

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +EA+ +F  M +   +PDV  +  ++ G CKS R D ++ +F+ M  K  +P+  TYTIL
Sbjct: 517 DEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTIL 576

Query: 524 VEGI 527
              +
Sbjct: 577 FNAV 580



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 203/417 (48%), Gaps = 15/417 (3%)

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
           C    G+V ++  +  K+   GY  +TV  N++++GLC+ G + ++L+F D ++  G   
Sbjct: 81  CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLL-----------DDIIAKGGKPNLVSYNVLLTGLCK 250
           N  +Y  L+    +   V+ A+ LL           D    KG   N+V Y++++  LC+
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCR 197

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +E   F+ ++   G  PN  +Y  L+R LC  G++ E   L+ EM       ++  
Sbjct: 198 NGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYV 257

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           + +LI  L  +G    A ++ DEMV   + P+  +   ++   C +G VD+  +  D + 
Sbjct: 258 FTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIG 317

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
               K +  TYN      C VG+V++A  +   +  +        Y  +I  LC+ G+  
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A++++  M + G TPD  T   L+ GLC    +++A+ +F  + E    PDV ++  L+
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            G C SRR   ++ + + M  K  +P+  TY+ L++G+     +  +  +L E+ ++
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVK 494



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 195/423 (46%), Gaps = 39/423 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  + F  ++ M+ +G    V   T L+  LCK   + +A ++ + MV+ G  P+  + T
Sbjct: 235 KFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCT 294

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C KGNV  A +L + + ++G+  +  TYN  + G C +G +  +++  D + ++
Sbjct: 295 ALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCRE 354

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+VPN  TY+ L++   K   V  A +++  +   G  P++V+  +LL GLCK  R ++A
Sbjct: 355 GVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQA 414

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I  F  L   G  P+V SY IL+   C   R  EA  LL +M   +  P IVTY+ LI  
Sbjct: 415 ILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDG 474

Query: 318 LAYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           L   G+  +A ++L+EM VKG   P   +Y+ ++  L  +  +D  V   +QM  R  +P
Sbjct: 475 LCRSGRISNAWRLLNEMHVKGPL-PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEP 533

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           +        ++C                          Y  +I   C+  +  +A  L  
Sbjct: 534 D--------VMC--------------------------YTIMIDGYCKSERIDEAINLFR 559

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM      PD  TY+ L   +   G      +   V+ + +  P V  +   L  LCKS 
Sbjct: 560 EMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKSE 616

Query: 497 RTD 499
             D
Sbjct: 617 HLD 619



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 190/425 (44%), Gaps = 34/425 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+  +++ F     M+  G  P+     +L+  LC   K  +   +++ M+  G+ 
Sbjct: 193 DCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLD 252

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
                +T L++ LCK G +  A ++ ++M + GY  N VT  +L+ G C+ GN++ + + 
Sbjct: 253 VSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL 312

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D + + G   + +TY+  +    K   V  A+++ D++  +G  PN+V+YN L+  LCK
Sbjct: 313 FDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCK 372

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G    A    + +   G  P++V+  ILL  LC   R ++A  L  ++     +P + +
Sbjct: 373 AGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWS 432

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ILI       +   A+ +L +M      P   +Y+ +I  LC  G++    + L++M 
Sbjct: 433 YTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMH 492

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            +   P+  TY+                ++ +L  KQ+     F                
Sbjct: 493 VKGPLPDTITYS---------------ILLDALWKKQHLDEAVF---------------- 521

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
              L  +M K G  PD   Y+ +I G C    I+EA+ +F  M   +  PD+  +  L  
Sbjct: 522 ---LFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFN 578

Query: 491 GLCKS 495
            + KS
Sbjct: 579 AVFKS 583



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 50/101 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L++A     +M+ +G +PDV+  T ++   CK+ ++ +AI +   M    ++
Sbjct: 508 DALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLV 567

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           PD  +YT L N + K G+  Y  + V  + D   P   + Y
Sbjct: 568 PDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY 608


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 230/475 (48%), Gaps = 16/475 (3%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF     M+     P++     L+  L K  +   A K+ + M   GI P+  +YT L++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LC++G+   A +L  +M+  G   ++V +N+L+ G C LG + ++ + L    + G V 
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
               YS L++  ++ R    A +L  +++ K  KP+++ Y +L+ GL K G+ E+A++  
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +PSKG  P+   YN ++++LC  G  EE   L  EM   +  P   T+ ILI S+  +
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM--------FHRR 373
           G    A ++  E+ K    PS A++N +I  LC  G++      L +M        F R 
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
                 +++ +      G + +A+  +    +  +S     Y  +I   CR G    A +
Sbjct: 482 SHSGNRSFDTMV---ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  +   G +PDS TY++LI GL   G  EEA ++F   +++ + P V  + +L+   C
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSC 596

Query: 494 KSRRTDLSLEVFQMMIEK-GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           + R+  ++  ++   ++K   + +ET   I  E    + E E +   L EL  R+
Sbjct: 597 RKRKVLVAFNLWMKYLKKISCLDDETANEI--EQCFKEGETERALRRLIELDTRK 649



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 203/473 (42%), Gaps = 60/473 (12%)

Query: 67  GNNNDTRHRDHKLNDAFLQLERMVS----------KGHKPDVVQATNLLYDLCKANKMKK 116
           GN  D+   +  L D F +L RMV            G    +   ++L+  L +A +  +
Sbjct: 263 GNYPDSVAHNALL-DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQ 321

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A ++   M+   I PD   YT L+  L K G +  A++L+  M   G   +T  YN++++
Sbjct: 322 AFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            LC  G L +       + +    P+A T++ L+ +  +   V  A ++  +I   G  P
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSP 441

Query: 237 NLVSYNVLLTGLCKEGRTEEA------------------------------------IRF 260
           ++ ++N L+ GLCK G  +EA                                    ++ 
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKA 501

Query: 261 FRDLP---SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +RDL      G  P++VSYN+L+   C  G  + A +LL  +     SP  VTYN LI  
Sbjct: 502 YRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ + A K+     K  FR S A Y  ++   C + KV +      +   +    +
Sbjct: 562 LHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLD 619

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA---FQL 434
           + T N +      G+ + A   +  L  +++      Y   +  LC+ G+ ++A   F +
Sbjct: 620 DETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSV 679

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK--PDVDNF 485
           L E  K   TP S     LI GLC    ++ A+E+F+   + ++K  P V N+
Sbjct: 680 LRE-KKILVTPPSCV--KLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNY 729



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 177/370 (47%), Gaps = 14/370 (3%)

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           Q L+ L   G+  +++ +  L+ A  K      A++    +     +P++ +YNV+L  +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172

Query: 249 CKEGRT-EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            +E      A   + ++      PN+ ++ IL+  L  +GR  +A ++  +M G   SP 
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            VTY ILI  L   G  D A K+  EM      P + ++N ++   C  G++    + L 
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL- 291

Query: 368 QMFHRRCKPNEGTYNGL----AMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVIT 420
           ++F +     +G   GL    +++ G+ + +   +AF +  ++  K        Y  +I 
Sbjct: 292 RLFEK-----DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQ 346

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L + GK   A +LL  M   G +PD+Y Y+++I+ LC  GL+EE   + + M E +  P
Sbjct: 347 GLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D      L+  +C++     + E+F  + + G  P+  T+  L++G+    EL+ +  +L
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466

Query: 541 KELQLRQVVS 550
            ++++ +  S
Sbjct: 467 HKMEVGRPAS 476



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 3/240 (1%)

Query: 57  SVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKK 116
           S++ + +     + DT      +  A+  L      G  PD+V    L+   C+A  +  
Sbjct: 476 SLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 535

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A+K++ ++   G+ PD+ +Y  L+N L + G    A +L    +D+ +  +   Y SL+ 
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH--SPAVYRSLMT 593

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             C    +  +     + ++K    +  T +  +E  +KE     A++ L ++  +  + 
Sbjct: 594 WSCRKRKVLVAFNLWMKYLKKISCLDDETAN-EIEQCFKEGETERALRRLIELDTRKDEL 652

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            L  Y + L GLC+ GR  EA+  F  L  K       S   L+  LC   + + A E+ 
Sbjct: 653 TLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 36/149 (24%)

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL- 490
           +Q L E+   G + DSY +  LI      G+ E+A+E F  M+E+D +PDV  +N +L  
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171

Query: 491 -----------------------------------GLCKSRRTDLSLEVFQMMIEKGQMP 515
                                              GL K  RT  + ++F  M  +G  P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQ 544
           N  TYTIL+ G+  +   + + ++  E+Q
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQ 260


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 230/459 (50%), Gaps = 7/459 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS---GIIPDASSYTYLVNCLCKKGNVGY 151
           KP V    ++L  + +A    +A++    +V +    I+P+  S+  ++  +CK G V  
Sbjct: 140 KPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDN 199

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A++L  +M       +  TY +L+ GLC +  +++++  LD +  +G  P+  T++ L+ 
Sbjct: 200 AIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLIN 259

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              K+       KL+D++  KG  PN V+YN L+ GLC +G+ ++A+     + S    P
Sbjct: 260 GLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVP 319

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N V+Y  ++  L  +GR  +   +L  M+          Y++L+  L   GK++ A+++ 
Sbjct: 320 NEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLF 379

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
            E +    + +   Y+ ++  LC + K D  +K L +M  + C PN  T++ L      V
Sbjct: 380 KESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEV 439

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G   +A  + + +     +  +  Y  +I  LC+ GK  +A  +  +M   G  PD   Y
Sbjct: 440 GNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAY 499

Query: 451 SSLIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           SS+I+GLC  G +EEAL+++  ++  E D +PDV  +N L   LCK      ++++   M
Sbjct: 500 SSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSM 559

Query: 509 IEKGQMPNETTYTILVEGIAHQ-DELELSAEVLKELQLR 546
           +++G  P+  T  I +  +  + D  +  A+ L EL +R
Sbjct: 560 LDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVR 598



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 222/443 (50%), Gaps = 19/443 (4%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD      L+  LCK +++ +A+ +++ M   G  P  +++  L+N LCKKG+     +L
Sbjct: 214 PDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKL 273

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           V+ M   G   N VTYN+L+ GLC+ G L+++L  LDR++    VPN  TY  ++    K
Sbjct: 274 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVK 333

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +       ++L  +  +G   N   Y+VL++GL KEG++EEA+R F++   KG + N V 
Sbjct: 334 QGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVL 393

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ L+  LC + + +EA ++L+EM     +P   T++ L+      G +  A++V  +M 
Sbjct: 394 YSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMT 453

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           K     +   Y+ +I  LC +GKV   +    +M    C+P+   Y+ +   LC  G V+
Sbjct: 454 KINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVE 513

Query: 395 EAFAII-QSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           EA  +  + L  + +S P    Y  +  +LC++    +A  LL  M   G  PD  T + 
Sbjct: 514 EALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNI 573

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF-NALLLGLCKSRRTDLSLEVFQMMIEK 511
            +R L                E+ D   D   F + L++ L K +R   + ++ ++M++K
Sbjct: 574 FLRML---------------REKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQK 618

Query: 512 GQMPNETTYTILVEGIAHQDELE 534
              P  +T+  +V  +    +++
Sbjct: 619 FLSPKASTWARVVHELCQPKKIQ 641



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 143/299 (47%), Gaps = 17/299 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K  +A    +  + KG K + V  + L+  LC+  K  +A+K++  M   G  P+A 
Sbjct: 368 KEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAF 427

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +++ L+    + GN   A+++ + M       N V Y+ L+ GLC  G + +++    ++
Sbjct: 428 TFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKM 487

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA--KGGKPNLVSYNVLLTGLCKEG 252
           +  G  P+   YS +++       V  A+KL ++++      +P++++YN+L   LCK+ 
Sbjct: 488 LATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQS 547

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
               A+     +  +G +P++V+ NI LR L          +L    DG          +
Sbjct: 548 SISRAVDLLNSMLDRGCDPDLVTCNIFLRML--------REKLDPPQDGAK------FLD 593

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV-KCLDQMF 370
            L+  L    +   A K+++ M++    P A+++  ++  LC   K+  V+ KC  +++
Sbjct: 594 ELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVIDKCWSKLY 652



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 40/245 (16%)

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+  LI + AY    +   KVL+ M   R      S         + GK  L  K + ++
Sbjct: 74  TFYSLIENYAYSSDFNSLEKVLNRM---RLENRVFSEKSFFVMFKAYGKAHLPNKAI-EL 129

Query: 370 FHRR-----CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           F+R      CKP   ++N +  +     +Q  F          +    EFY +V+ +   
Sbjct: 130 FYRMSFEFYCKPTVKSFNSVLNVI----IQAGF----------HDRALEFYNHVVGA--- 172

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
                               P+  +++ +I+ +C  GL++ A+E+F  M      PD   
Sbjct: 173 --------------KDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYT 218

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +  L+ GLCK  R D ++ +   M  +G  P+  T+ +L+ G+  + +     +++  + 
Sbjct: 219 YCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMF 278

Query: 545 LRQVV 549
           L+  V
Sbjct: 279 LKGCV 283


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 237/494 (47%), Gaps = 31/494 (6%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK----VMEMMVSSG--------- 128
           +F+ + R   K H P+  +A +L + +    + K+++K    V+ ++++ G         
Sbjct: 114 SFIVVFRAYGKAHLPE--KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171

Query: 129 -----------IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
                      I P+  S+  ++  LCK G V  A+++   M +     +  TY +L+ G
Sbjct: 172 DYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDG 231

Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
           LC    +++++  LD +  +G  P+   Y+ L++   K+  +    KL+D++  KG  PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPN 291

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
            V+YN L+ GLC +G+ ++A+     + S    PN V+Y  L+  L  + R  +   LL 
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLI 351

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
            M+          Y++LI  L   GK + A+ +  +M +   RP+   Y+ +I  LC EG
Sbjct: 352 SMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREG 411

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           K +   + L+ M    C PN  TY+ L       G  +EA  + + +     S  +  Y 
Sbjct: 412 KPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYS 471

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF---VVM 473
            +I  LC  G+  +A  +  +M   G  PD+  YSS+I+GLC  G ++ AL+++   +  
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQ 531

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ-DE 532
           EE   +PDV  +N LL GLC  +    ++++   M+++G  P+  T    +  ++ + D 
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDS 591

Query: 533 LELSAEVLKELQLR 546
            E     L+EL  R
Sbjct: 592 CEEGRSFLEELVAR 605



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 216/467 (46%), Gaps = 54/467 (11%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  K   PD      L+  LCK  ++ +A+ +++ M S G  P    Y  L++ LCKKG+
Sbjct: 213 MPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +    +LV+ M   G   N VTYN+L+ GLC+ G L++++  L+R++    +PN  TY  
Sbjct: 273 LSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K+R      +LL  +  +G + N   Y+VL++GL KEG+ EEA+  ++ +  KG
Sbjct: 333 LINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKG 392

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN+V Y+ ++  LC EG+  EA E+L  M      P + TY+ L+      G ++ A+
Sbjct: 393 CRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAI 452

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           +V  EM +     +   Y+ +I  LC  G+V   +    +M     KP+   Y+ +   L
Sbjct: 453 QVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGL 512

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           CG+G +  A  +   +                  LC++    Q              PD 
Sbjct: 513 CGIGSMDAALKLYHEM------------------LCQEEPKSQ--------------PDV 540

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA-------------------- 487
            TY+ L+ GLCM+  +  A+++   M +    PDV   N                     
Sbjct: 541 VTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLE 600

Query: 488 -LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            L+  L K +R   + ++ ++M+ K   P  +T+ ++V  I    ++
Sbjct: 601 ELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKI 647


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 229/479 (47%), Gaps = 9/479 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + ++A+  L +M ++G KPDV+  T L+  LC A ++  A  V   M  S   PD  +Y 
Sbjct: 245 RFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI 304

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++     G+    M++   M+  GY  N V Y +++  LC +G + ++L+  D + QK
Sbjct: 305 TLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK 364

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+VP  ++Y+ L+    K      A++L   +   G KPN  ++ + +    K G + +A
Sbjct: 365 GIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKA 424

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I+ +  + SKG  P+VV+ N +L  L   GR   A  +  E+     SP  +TY ++I  
Sbjct: 425 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKC 484

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +   K D A+K+  +M++    P   + N +I  L   G+ D   +   Q+     +P 
Sbjct: 485 CSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPT 544

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           +GTYN  LA L   GKV+E   +++ + +         Y  ++  LC+ G    A  +LY
Sbjct: 545 DGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLY 604

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            MT  G  PD  +Y+++I GL  E    EA  IF  M++    PD      +L    K  
Sbjct: 605 SMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIG 663

Query: 497 RTDLSLEVFQ-MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
               +L + +   ++ G   + ++   L+EGI  +  +E      K ++  ++++ S +
Sbjct: 664 LMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE------KSIEFAEIIASSGI 716



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 228/498 (45%), Gaps = 40/498 (8%)

Query: 86  LERMVSKGHKPDVVQAT---NLLYDLCKAN-KMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           LER  S   KP V   T   N + +L + + ++    +V ++M    +  +  ++  +  
Sbjct: 74  LERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFG 133

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            L  +G +  A   +  M++ G   N  TYN LV  L   G   ++L+    ++  G+VP
Sbjct: 134 GLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVP 193

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TYS L+ A  K R V   + LL ++ A G KPN+ SY + +  L +  R +EA R  
Sbjct: 194 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 253

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             + ++G +P+V+++ +L++ LC  GR  +A ++  +M   D+ P  VTY  L+     +
Sbjct: 254 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 313

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G +   +++ + M    +  +  +Y  +I  LC  G+V   ++  D+M  +   P + +Y
Sbjct: 314 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 373

Query: 382 N----GLAMLCGVGKVQEAFAIIQSLGNKQNS---------------SPQEFYKY----- 417
           N    G       G   E F  +   G K N                S +   +Y     
Sbjct: 374 NSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKS 433

Query: 418 ------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                       V+  L + G+   A ++ +E+   G +PD+ TY+ +I+        +E
Sbjct: 434 KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 493

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A++IF  M E +  PDV   N+L+  L K+ R D +  +F  + E    P + TY  L+ 
Sbjct: 494 AVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLA 553

Query: 526 GIAHQDELELSAEVLKEL 543
           G+  + +++    +L+E+
Sbjct: 554 GLGREGKVKEVMHLLEEM 571



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 232/543 (42%), Gaps = 84/543 (15%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F +L+ M   G  PD +  T ++    KA+K  +A+K+   M+ +  +PD  +   L++ 
Sbjct: 463 FHELKAM---GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDT 519

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           L K G    A ++  ++++        TYN+L+ GL   G + + +  L+ +      PN
Sbjct: 520 LYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPN 579

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ +L+   K   V+ A+ +L  +  KG  P+L SYN ++ GL KE R  EA   F 
Sbjct: 580 LITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFC 639

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE--MDGGDRSPTIVTYNILIGSLAY 320
            +  K   P+  +   +L S    G  +EA  ++ +  +  G ++     ++++ G L  
Sbjct: 640 QM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKK 698

Query: 321 HG-------------------------------KTDHALKVLDEMVKGRFRPSAAS---- 345
            G                               K   AL+   E+VK +F+    S    
Sbjct: 699 AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA-HELVK-KFKSFGVSLKTG 756

Query: 346 -YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQ 401
            YN +I  L  E  +D+      +M    C P+E TYN   +L  +GK   ++E   + +
Sbjct: 757 LYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYN--LLLDAMGKSMRIEEMLKVQE 814

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +  K   S    Y  +I+ L +  +  QA  L Y +   GF+P   TY  L+ GL   G
Sbjct: 815 EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 874

Query: 462 LIEEALEIFVVMEEYDYK-----------------------------------PDVDNFN 486
            IE+A  +F  M EY  K                                   PD+ ++ 
Sbjct: 875 RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 934

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            ++  LCK+ + +  L  F+ ++E G  P+  TY +L++G+     LE +  +  E+Q +
Sbjct: 935 IIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 994

Query: 547 QVV 549
            +V
Sbjct: 995 GIV 997



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 217/463 (46%), Gaps = 13/463 (2%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++  +NDA   L  M +KG  PD+     ++Y L K  +  +A  +   M    +I
Sbjct: 588  DCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLI 646

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY----GYPTNTVTYNSLVRGLCMLGNLNQ 186
            PD ++   ++    K G +  A+ +++   DY    G  T+  + +SL+ G+     + +
Sbjct: 647  PDYATLCTILPSFVKIGLMKEALHIIK---DYFLQPGSKTDRSSCHSLMEGILKKAGIEK 703

Query: 187  SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
            S++F + +   G+  + F    L++   K++    A +L+    + G       YN L+ 
Sbjct: 704  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 763

Query: 247  GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            GL  E   + A   F ++   G  P+  +YN+LL ++    R EE  ++  EM       
Sbjct: 764  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 823

Query: 307  TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            T VTYN +I  L    + + A+ +   ++   F P+  +Y P++  L   G+++      
Sbjct: 824  TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF 883

Query: 367  DQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            ++M    CK N   YN   +L G    G  ++   + Q + ++  +   + Y  +I +LC
Sbjct: 884  NEMLEYGCKANCTIYN--ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLC 941

Query: 424  RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            + G+         ++ + G  PD  TY+ LI GL     +EEA+ +F  M++    P++ 
Sbjct: 942  KAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLY 1001

Query: 484  NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             +N+L+L L K+ +   + ++++ ++ KG  PN  TY  L+ G
Sbjct: 1002 TYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1044



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 223/493 (45%), Gaps = 44/493 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  A + L  M   G   +      L+Y L K+   ++A++V  +M+  G++P   +Y+ 
Sbjct: 141 LRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSV 200

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+    K+ +V   + L+ +ME +G   N  +Y   +R L      +++ + L ++  +G
Sbjct: 201 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG 260

Query: 199 LVPNAFTYSFLLEA----------------------------------AYKERG-VHAAM 223
             P+  T++ L++                                    + + G   + M
Sbjct: 261 CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVM 320

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           ++ + + A G   N+V+Y  ++  LC+ GR  EA+  F ++  KG  P   SYN L+   
Sbjct: 321 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGF 380

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD--EMVKGR-FR 340
               R+ +A EL   MD     P   T+ + I    Y+GK+  ++K +   E++K +   
Sbjct: 381 LKADRFGDALELFKHMDIHGPKPNGYTHVLFIN---YYGKSGESIKAIQRYELMKSKGIV 437

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAI 399
           P   + N ++  L   G++ +  +   ++      P+  TY  +   C    K  EA  I
Sbjct: 438 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 497

Query: 400 IQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
              +  + N  P       +I +L + G+  +A+++ Y++ +    P   TY++L+ GL 
Sbjct: 498 FYDM-IENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLG 556

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            EG ++E + +   M   +Y P++  +N +L  LCK+   + +L++   M  KG +P+ +
Sbjct: 557 REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 616

Query: 519 TYTILVEGIAHQD 531
           +Y  ++ G+  ++
Sbjct: 617 SYNTVIYGLVKEE 629



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 196/448 (43%), Gaps = 42/448 (9%)

Query: 77   HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            H + D FLQ       G K D     +L+  + K   ++K+I+  E++ SSGI  D    
Sbjct: 670  HIIKDYFLQ------PGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFL 723

Query: 137  TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              L+  LCK+     A +LV+K + +G    T  YNSL+ GL                + 
Sbjct: 724  CPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL----------------VD 767

Query: 197  KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            + L+  A              G+ A MK L      G  P+  +YN+LL  + K  R EE
Sbjct: 768  ENLIDIA-------------EGLFAEMKEL------GCGPDEFTYNLLLDAMGKSMRIEE 808

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
             ++   ++  KG+E   V+YN ++  L    R E+A +L   +     SPT  TY  L+ 
Sbjct: 809  MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLD 868

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             L   G+ + A  + +EM++   + +   YN ++      G  + V      M  +   P
Sbjct: 869  GLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP 928

Query: 377  NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            +  +Y  +   LC  G++ +     + L           Y  +I  L +  +  +A  L 
Sbjct: 929  DIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 988

Query: 436  YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             EM K G  P+ YTY+SLI  L   G   EA +++  +    +KP+V  +NAL+ G   S
Sbjct: 989  NEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVS 1048

Query: 496  RRTDLSLEVFQMMIEKGQMPNETTYTIL 523
              TD +   +  MI  G +PN +TY  L
Sbjct: 1049 GSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 214/474 (45%), Gaps = 9/474 (1%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R+ K+ +    LE M    + P+++    +L  LCK   +  A+ ++  M + G IPD S
Sbjct: 557  REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 616

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL-DR 193
            SY  ++  L K+     A  +  +M+    P +  T  +++     +G + ++L  + D 
Sbjct: 617  SYNTVIYGLVKEERYNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKDY 675

Query: 194  LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
             +Q G   +  +   L+E   K+ G+  +++  + I + G   +      L+  LCK+ +
Sbjct: 676  FLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKK 735

Query: 254  TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              EA    +   S G       YN L+  L  E   + A  L AEM      P   TYN+
Sbjct: 736  ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 795

Query: 314  LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
            L+ ++    + +  LKV +EM +  +  +  +YN II+ L    +++  +     +  + 
Sbjct: 796  LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 855

Query: 374  CKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              P   TY  L   L   G++++A   F  +   G K N +    Y  ++      G T 
Sbjct: 856  FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT---IYNILLNGHRIAGNTE 912

Query: 430  QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            +   L  +M   G  PD  +Y+ +I  LC  G + + L  F  + E   +PD+  +N L+
Sbjct: 913  KVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLI 972

Query: 490  LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             GL KS+R + ++ +F  M +KG +PN  TY  L+  +    +   + ++ +EL
Sbjct: 973  DGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 192/427 (44%), Gaps = 34/427 (7%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +S  Y++  +   G VG   ++ + M+      N  T+ ++  GL + G L  +   L  
Sbjct: 91  ASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPV 150

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + + G+V NA+TY+ L+    K      A+++   ++  G  P++ +Y+VL+    K   
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 210

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            E  +   R++ + G +PNV SY I +R L    R++EA  +LA+M+     P ++T+ +
Sbjct: 211 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 270

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+   A  V  +M K   +P   +Y  ++ +    G                
Sbjct: 271 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ------------- 317

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
                              V E +  +++ G   N      Y  VI +LC+ G+ ++A +
Sbjct: 318 ------------------SVMEIWNAMKADGYNDNVVA---YTAVIDALCQVGRVFEALE 356

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  EM + G  P+ Y+Y+SLI G        +ALE+F  M+ +  KP+       +    
Sbjct: 357 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 416

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           KS  +  +++ +++M  KG +P+      ++ G+A    L ++  V  EL+   V  ++ 
Sbjct: 417 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTI 476

Query: 554 VERLVMQ 560
              ++++
Sbjct: 477 TYTMMIK 483



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 137/276 (49%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  ++ +     E M  KG++   V    ++  L K+ ++++AI +   ++S G  
Sbjct: 798  DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 857

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L++ L K G +  A  L  +M +YG   N   YN L+ G  + GN  +    
Sbjct: 858  PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 917

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
               ++ +G+ P+  +Y+ +++   K   ++  +     ++  G +P+L++YN+L+ GL K
Sbjct: 918  FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 977

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              R EEA+  F ++  KG  PN+ +YN L+  L   G+  EA ++  E+      P + T
Sbjct: 978  SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1037

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            YN LI   +  G TD A      M+ G   P++++Y
Sbjct: 1038 YNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 231/495 (46%), Gaps = 4/495 (0%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPD 132
            R  +L+ AF  + R+++ G +   +  + LL  LC   +   A+  V+  M   G  PD
Sbjct: 110 RRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPD 169

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQF 190
             SYT L+  LC       A+ L+  M D+    P + V Y +++ GL   G L+++   
Sbjct: 170 LFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSL 229

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D ++ +G  P+  TYS ++ A  K + +  A ++   ++  G  P+ + Y  L+ G C 
Sbjct: 230 FDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCS 289

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EAI  F+ +   G EP+VV+Y  L+  LC  G+  EA ++   +      P   T
Sbjct: 290 SGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTT 349

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+   A  G       +LD M+K   +     +N I+       KVD  +     M 
Sbjct: 350 YGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMR 409

Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +   P+   Y   L +LC  G+V +A +   SL ++  +     +  +I  LC   K  
Sbjct: 410 QQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWD 469

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +  +L +EM   G   D+  +++++  LC +G + EA  +F +M     +P+ + +N L+
Sbjct: 470 KVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLI 529

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            G C   + D ++++  +M+  G  P++ TY  ++ G +    +E    +L+E+  + V 
Sbjct: 530 DGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVN 589

Query: 550 SESAVERLVMQYDFE 564
                  +++Q  F+
Sbjct: 590 PGIVTYEMLLQGLFQ 604



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 190/404 (47%), Gaps = 1/404 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L+ A+   + M+ +G  PDVV  ++++  L K   M KA +V   MV +G++PD  
Sbjct: 219 REGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCI 278

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT LV+  C  G    A+ + +KM  +G   + VTY +L+  LC  G   ++ +  D L
Sbjct: 279 MYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL 338

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G  P++ TY  LL     E  +     LLD ++ KG +     +N+++    K  + 
Sbjct: 339 VKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKV 398

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+  F ++  +G  P++V+Y  +L  LC  GR ++A      +     +P IV +  L
Sbjct: 399 DEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTL 458

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K D   ++  EM+          +N I+  LC +G+V       D M     
Sbjct: 459 IHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGI 518

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +PN  TYN L    C  GK+ EA  ++  +           Y  +I    + G+      
Sbjct: 519 EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLT 578

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           LL EM   G  P   TY  L++GL   G    A E+++ M ++D
Sbjct: 579 LLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWD 622



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 204/442 (46%), Gaps = 10/442 (2%)

Query: 76  DHKLNDAFLQLERMVS--KGHKP-DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           D K +   L L  +++  KG  P DVV  T ++  L +  ++ KA  + + M+  G  PD
Sbjct: 182 DDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPD 241

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +Y+ +++ L K   +  A Q+  +M   G   + + Y SLV G C  G   +++    
Sbjct: 242 VVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFK 301

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++ + G+ P+  TY+ L++   K      A K+ D ++ +G KP+  +Y  LL G   EG
Sbjct: 302 KMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEG 361

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              E       +  KG +     +N+++ +     + +EA  + + M     +P IV Y 
Sbjct: 362 ALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYG 421

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            ++  L   G+ D AL   + +      P+   +  +I  LC+  K D V +   +M  R
Sbjct: 422 TVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDR 481

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
               +   +N  +  LC  G+V EA   F ++  +G + N++    Y  +I   C  GK 
Sbjct: 482 GICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNT---YNTLIDGYCLDGKM 538

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A +LL  M   G  P   TY+++I G    G IE+ L +   M+     P +  +  L
Sbjct: 539 DEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEML 598

Query: 489 LLGLCKSRRTDLSLEVFQMMIE 510
           L GL ++ RT  + E++  MI+
Sbjct: 599 LQGLFQAGRTVAAKELYLRMIK 620



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 221/512 (43%), Gaps = 47/512 (9%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-- 130
           R R  +  DA    +R++ +G +  +      L D+ +A+    AI +   M  +G    
Sbjct: 37  RQRATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASP-AVAISLFNRMPRAGATSA 95

Query: 131 -PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            P+ ++Y  ++ C  + G +  A   V ++   G   + + ++ L++GLC     + ++ 
Sbjct: 96  APNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMD 155

Query: 190 F-LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA--KGGKP-NLVSYNVLL 245
             L R+ + G  P+ F+Y+ LL+    ++    A+ LL  I+A  KG  P ++V+Y  ++
Sbjct: 156 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLL-HIMADHKGRCPLDVVAYTTVI 214

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            GL +EG+ ++A   F  +  +G  P+VV+Y+ ++ +L      ++A ++   M      
Sbjct: 215 NGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVM 274

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P  + Y  L+      GK   A+ +  +M +    P   +Y  ++  LC  GK     K 
Sbjct: 275 PDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKI 334

Query: 366 LDQMFHRRCKPNEGTYNGLA--------------------------------MLCGV--- 390
            D +  R  KP+  TY  L                                 M+ G    
Sbjct: 335 FDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAK 394

Query: 391 -GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             KV EA  +  ++  +Q  +P    Y  V+  LC  G+   A      +   G  P+  
Sbjct: 395 HNKVDEALLVFSNM-RQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIV 453

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
            +++LI GLC     ++  E+   M +     D   FNA++  LCK  R   +  +F +M
Sbjct: 454 VFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 513

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +  G  PN  TY  L++G     +++ + ++L
Sbjct: 514 VRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLL 545


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 192/395 (48%), Gaps = 2/395 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDASSYTYLVNCLCKKGNVGYAMQ 154
           PDVV    L+   CKA    +A+ +   +   G   P+A S+  LV  LCK      A+ 
Sbjct: 9   PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           + ++M   G   +    N+L+   C LG L Q+ + L  +     V + FTYS+L++A  
Sbjct: 69  VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           K      A+++  ++   G  P+ V YNVL++ L K+G+ +EA+    D+  KG  P+  
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YNI++  L   GR+E+A      M     SP +VTYN L+  L    +TD A  + DEM
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKV 393
              +  P   ++  +I  L   G+++  ++   ++      PN   YN L +  C  G+V
Sbjct: 249 QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQV 308

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            + + + Q +           Y  ++    R+G T  A +LL EM + G TP   TY+ L
Sbjct: 309 DKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVL 368

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
           IR L M G +E+A  +F  M    + PD+  ++AL
Sbjct: 369 IRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 6/381 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHAAMKL 225
           + V YN+L+ G C  G+ +++L    RL Q+G   PNA ++  L+    K      A+ +
Sbjct: 10  DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAV 69

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
             +++  G + ++   N L+   C+ G   +A R    + +  F  +V +Y+ L+ +L  
Sbjct: 70  FQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGK 129

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            GR  +A E+ + M      P  V YN+LI  L   GK D AL++L++M +    P   +
Sbjct: 130 AGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT 189

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ---EAFAIIQS 402
           YN +I  L S G+ +        M  R+  P+  TYN L  L G+ K++   EA  +   
Sbjct: 190 YNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTL--LNGLKKLRRTDEACDLFDE 247

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +   +       +  +I +L + G+   A +    + K G  P+SY Y++LI G C  G 
Sbjct: 248 MQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQ 307

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++  E+F  M E    PD   +  L+LG  +   T +++E+ Q M+ +G  P   TY +
Sbjct: 308 VDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNV 367

Query: 523 LVEGIAHQDELELSAEVLKEL 543
           L+  ++   ++E +  + KE+
Sbjct: 368 LIRSLSMAGQVEDAYTLFKEM 388



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 166/376 (44%), Gaps = 34/376 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA    + M+  G + DV     L++  C+   +++A +++  M +   + D  +Y+
Sbjct: 62  RATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYS 121

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
           YL++ L K G    A+++   M+  G   +TV YN L+  L   G ++++L+ L+ + +K
Sbjct: 122 YLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 181

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++P+  TY+ +++          A      +  +   P++V+YN LL GL K  RT+EA
Sbjct: 182 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 241

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F ++ +    P++ ++  L+ +L   GR E+A E  A +      P    YN LI  
Sbjct: 242 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISG 301

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G+ D   ++  +M++    P + +Y  ++      G   + ++ L +M      P 
Sbjct: 302 FCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 361

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  I SL   G+   A+ L  E
Sbjct: 362 LATYNVL----------------------------------IRSLSMAGQVEDAYTLFKE 387

Query: 438 MTKYGFTPDSYTYSSL 453
           M   GF PD  TYS+L
Sbjct: 388 MIAKGFNPDMQTYSAL 403



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 41/280 (14%)

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDL 361
           D +P +V YN LI      G  D AL +   + + G  +P+A S++ ++  LC   +   
Sbjct: 6   DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 65

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +    +M     + +    N L    C +G +++A  ++  +           Y Y++ 
Sbjct: 66  ALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMD 125

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI----------- 469
           +L + G+  +A ++   M K G  PD+  Y+ LI  L  +G ++EALE+           
Sbjct: 126 ALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMP 185

Query: 470 ------------------------FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
                                   F +M+   + PDV  +N LL GL K RRTD + ++F
Sbjct: 186 DCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 245

Query: 506 QMMIEKGQMPNETTYTILVEGIAH----QDELELSAEVLK 541
             M     MP+ TT+  L++ +A     +D LE SA ++K
Sbjct: 246 DEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVK 285



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 71/139 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  +  ++ DA  Q  R+V  GH P+      L+   C++ ++ K  ++ + M+     
Sbjct: 265 DTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCF 324

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD+ +YT LV    ++G+   AM+L+++M   G+     TYN L+R L M G +  +   
Sbjct: 325 PDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTL 384

Query: 191 LDRLIQKGLVPNAFTYSFL 209
              +I KG  P+  TYS L
Sbjct: 385 FKEMIAKGFNPDMQTYSAL 403



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 2/188 (1%)

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
           C P+   YN L A  C  G    A  + + L  + +  P    +  ++  LC+  +   A
Sbjct: 7   CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             +  EM   G   D    ++LI   C  G++ +A  +   M  + +  DV  ++ L+  
Sbjct: 67  LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           L K+ R   +LEVF  M + G MP+   Y +L+  +  Q +++ + E+L+++  + ++ +
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186

Query: 552 SAVERLVM 559
                +V+
Sbjct: 187 CRTYNIVI 194


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 220/470 (46%), Gaps = 37/470 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDA 133
           +   L+ +      MV KG  P      NLL  +  ++   +      E  +   ++ D 
Sbjct: 106 QSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK--VVLDV 163

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            S+  ++   C+ G +  +  L+ ++ ++G+  N V Y +L+ G C  G + ++      
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + + GLV N +TY+ L+   +K        ++ + +   G  PNL +YN ++  LCK+GR
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGR 283

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T++A + F ++  +G   N+V+YN L+  LC E +  EAN+++ +M     +P ++TYN 
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      GK   AL +  ++      PS  +YN +++  C +G      K + +M  R 
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            KP++ TY  L                                  I +  R      A Q
Sbjct: 404 IKPSKVTYTIL----------------------------------IDTFARSDNMETAIQ 429

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L   M + G  PD +TYS LI G C++G + EA  +F  M E   +P+   +N ++LG C
Sbjct: 430 LRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYC 489

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           K   +  +L +F+ M EK   PN  +Y+ L+  +  + +L+ + ++++++
Sbjct: 490 KEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKM 539



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 180/354 (50%), Gaps = 1/354 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P+VV  T L+   CK  +++KA  +   M   G++ +  +YT L++ L K G     
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQG 252

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            ++ EKM+++G   N  TYN ++  LC  G    + +  D + ++G+  N  TY+ L+  
Sbjct: 253 FEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGG 312

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             +E   + A K++D + +    PNL++YN L+ G C  G+  +A+   RDL S+G  P+
Sbjct: 313 LCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPS 372

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           +V+YN+L+   C +G    A +++ EM+     P+ VTY ILI + A     + A+++  
Sbjct: 373 LVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRS 432

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
            M +    P   +Y+ +I   C +G+++   +    M  +  +PNE  YN + +  C  G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEG 492

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
               A  + + +  K+ +     Y Y+I  LC++ K  +A  L+ +M   G  P
Sbjct: 493 SSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP 546



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 200/419 (47%), Gaps = 2/419 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  ++N   +  ++  ++    +M D G+   +  +N+L+  +    + NQ   F +   
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            K +V + +++  +++   +   +  +  LL ++   G  PN+V Y  L+ G CK+G  E
Sbjct: 157 IK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A   F ++   G   N  +Y +L+  L   G  ++  E+  +M      P + TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G+T  A KV DEM +     +  +YN +I  LC E K +   K +DQM      
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN  TYN L    C VGK+ +A ++ + L ++  S     Y  +++  CRKG T  A ++
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + EM + G  P   TY+ LI        +E A+++   MEE    PDV  ++ L+ G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
             + + +  +F+ M+EK   PNE  Y  ++ G   +     +  + ++++ +++    A
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVA 514



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 143/286 (50%), Gaps = 5/286 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +  DAF   + M  +G   ++V    L+  LC+  K  +A KVM+ M S  I P+  
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLI 339

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  C  G +G A+ L   ++  G   + VTYN LV G C  G+ + + + +  +
Sbjct: 340 TYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEM 399

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P+  TY+ L++   +   +  A++L   +   G  P++ +Y+VL+ G C +G+ 
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA R F+ +  K  EPN V YN ++   C EG    A  L  +M+  + +P + +Y+ L
Sbjct: 460 NEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYL 519

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           I  L    K   A  ++++M+     PS       I  L S  K D
Sbjct: 520 IRVLCKERKLKEAEDLVEKMIDSGIDPSDT-----ICNLISRAKTD 560



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  R   +  A      M   G  PDV   + L++  C   +M +A ++ + MV   + 
Sbjct: 416 DTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLE 475

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  ++   CK+G+   A++L   ME+     N  +Y+ L+R LC    L ++   
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDL 535

Query: 191 LDRLIQKGLVPN 202
           ++++I  G+ P+
Sbjct: 536 VEKMIDSGIDPS 547


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 225/493 (45%), Gaps = 11/493 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ K N  +     M+  G   +     +LL  L +     +  ++ME MV   I P+  
Sbjct: 282 RNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVV 341

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM----EDYGYPT----NTVTYNSLVRGLCMLGNLNQ 186
           ++  L+N +CK   V  A++++EKM    E  G       + V YN+L+ GLC +G   +
Sbjct: 342 TFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQE 401

Query: 187 SLQFLDRL-IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
            L  ++R+  QKG  P+  TY+ L++   K   +    +L D++  +G  PN+V+ N L+
Sbjct: 402 GLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLV 461

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G+C+ GR   A+ FF +   +G + + V+Y  L+ + C    +E+A EL  EM     S
Sbjct: 462 GGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCS 521

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P  + Y  LI   +  G+   A  VL E+ K   RP    YN +I   C   K   V + 
Sbjct: 522 PDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEM 581

Query: 366 LDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L +M     KP+  TYN L A     G ++ A  +++ +           Y  VI + C 
Sbjct: 582 LKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCL 641

Query: 425 KGKTYQAFQLLYEMTKYG-FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            G   +A ++  +M       P++  Y+ LI  LC    ++ A+ +   M+ +   P+  
Sbjct: 642 NGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTT 701

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +NA+  GL   +  +   E    MIE    P+  T  IL E ++   E+E   + +   
Sbjct: 702 TYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGC 761

Query: 544 QLRQVVSESAVER 556
           ++    ++ A  R
Sbjct: 762 EVSSSTAQKASSR 774



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 187/438 (42%), Gaps = 47/438 (10%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G++  +     L+  LC+         L  +M   G    +   NSL+ GL   GN N+ 
Sbjct: 265 GVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRM 324

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK----------PN 237
            + ++++++  + PN  T+  L+    K R V  A+++L+ +   GGK          P+
Sbjct: 325 NELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKM--SGGKESGGISVSVEPD 382

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +V YN L+ GLCK GR +E +     + S KG  P+ ++YN L+   C  G  E+  EL 
Sbjct: 383 VVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELF 442

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM+    +P +VT N L+G +   G+   A+    E  +   +  A +Y  +I   C+ 
Sbjct: 443 DEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNV 502

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
              +  ++  ++M    C P+                    AI+              Y 
Sbjct: 503 NNFEKAMELFNEMLKSGCSPD--------------------AIV--------------YY 528

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I+   + G+   A  +L E+ K G  PD+  Y++LI G C         E+   MEE 
Sbjct: 529 TLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEA 588

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
             KPD   +N L+    K+     + +V + MI+ G +P   TY  ++           +
Sbjct: 589 GLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEA 648

Query: 537 AEVLKELQLRQVVSESAV 554
            E+ K+++    V  + V
Sbjct: 649 MEIFKDMKAASKVPPNTV 666



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 195/435 (44%), Gaps = 32/435 (7%)

Query: 137 TYLVNC----LCKKGNVGYAMQLVEKM----EDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           TYL N     L + G V  A++++++M    +D     N  T + L   L +    N+ L
Sbjct: 190 TYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFL-LKRERNEEL 248

Query: 189 QFLDRLI-------QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
              D ++       + G++ ++F    L+    + R  +    L  ++I  G      + 
Sbjct: 249 LSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAAC 308

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           N LLTGL +EG           +     +PNVV++ IL+  +C   R ++A E+L +M G
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368

Query: 302 GDRS--------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIAR 352
           G  S        P +V YN LI  L   G+    L +++ M   +   P   +YN +I  
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEA---FAIIQSLGNKQN 408
            C  G+++   +  D+M      PN  T N L   +C  G+V  A   F   Q  G K +
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +     Y  +I + C      +A +L  EM K G +PD+  Y +LI G    G + +A  
Sbjct: 489 AVT---YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASF 545

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   +++   +PD   +N L+ G C++ +     E+ + M E G  P+  TY  L+   +
Sbjct: 546 VLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYAS 605

Query: 529 HQDELELSAEVLKEL 543
              +L+ + +V++++
Sbjct: 606 KNGDLKFAQKVMRKM 620



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 173/391 (44%), Gaps = 41/391 (10%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG----LVPNAFT----YSFLLEAAYKERG 218
           NT   N  +  L   G +  +L+ +D + +        PN  T    +SFLL+    E  
Sbjct: 189 NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEE- 247

Query: 219 VHAAMKLLDDIIAKGGKPNLVS---YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           + +  ++++ ++  G    L+S      L+T LC+  +T      F ++   G      +
Sbjct: 248 LLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAA 307

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
            N LL  L  EG +   NEL+ +M   D  P +VT+ ILI  +    + D AL+VL++M 
Sbjct: 308 CNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMS 367

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
            G+                  G + + V+           P+   YN L   LC VG+ Q
Sbjct: 368 GGK----------------ESGGISVSVE-----------PDVVIYNTLIDGLCKVGRQQ 400

Query: 395 EAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           E   +++ + +++  +P    Y  +I   C+ G+  +  +L  EM K G  P+  T ++L
Sbjct: 401 EGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTL 460

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + G+C  G +  A+  FV  +    K D   + AL+   C     + ++E+F  M++ G 
Sbjct: 461 VGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGC 520

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            P+   Y  L+ G +    +  ++ VL EL+
Sbjct: 521 SPDAIVYYTLISGFSQAGRMADASFVLAELK 551


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 172/303 (56%), Gaps = 5/303 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E M + G  P V+    ++   CKA KM KA  +++ MV+  I P+  ++  L++  C+
Sbjct: 252 VEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCR 311

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
             NV  A ++ E+M+  G   N VTYNSL+ GLC  G L+++L   D++   GL PN  T
Sbjct: 312 DENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K++ +  A ++LDDI  +G  PN++++N L+    K GR ++A      + 
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PNV +YN L+   C EG  +EA +L  EM+G      +VTYNIL+ +L   G+T 
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETR 491

Query: 326 HALKVLDEMV----KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            A+++LDEM     KGR R +  +YN +I   C++GK++   + L++M  +   PN  TY
Sbjct: 492 KAVRLLDEMTLMEKKGR-RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550

Query: 382 NGL 384
           + L
Sbjct: 551 DIL 553



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 209/452 (46%), Gaps = 72/452 (15%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +++ A    +R    G +   +    +L  L K  ++     V + M+   I  +  
Sbjct: 171 KNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVV 230

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  ++N LCK G    A  +VE M+ +G+  + +TYN+++ G C  G + ++   L  +
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + K + PN  T++ L++   ++  V AA K+ +++  +G +PN+V+YN L+ GLC  G+ 
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+     +   G +PNVV+YN L+   C +   +EA E+L ++     +P ++T+N L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G+ D A  +   M+     P+ ++YN +I   C EG V    K   +M     
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           K +  TYN L                                  + +LC+KG+T +A +L
Sbjct: 471 KADLVTYNIL----------------------------------VDALCKKGETRKAVRL 496

Query: 435 LYEMT---KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           L EMT   K G   +  TY+ LI+G C +G +EEA                   N LL  
Sbjct: 497 LDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEA-------------------NRLL-- 535

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
                           M+EKG +PN TTY IL
Sbjct: 536 --------------NEMLEKGLIPNRTTYDIL 553



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 194/381 (50%), Gaps = 4/381 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N++  + LV      G ++ +L+  DR    G   +A + + +L +  KE  +     + 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            ++I +    N+V+++V++ GLCK G+ ++A     D+ + GF P+V++YN ++   C  
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G+  +A+ LL EM      P  +T+NILI           A KV +EM +   +P+  +Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN 405
           N +I  LCS GK+D  +   D+M     KPN  TYN L    C    ++EA  ++  +G 
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           +  +     +  +I +  + G+   AF L   M   G  P+  TY+ LI G C EG ++E
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCK---SRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           A ++   ME    K D+  +N L+  LCK   +R+    L+   +M +KG+  N  TY +
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNV 517

Query: 523 LVEGIAHQDELELSAEVLKEL 543
           L++G  ++ +LE +  +L E+
Sbjct: 518 LIKGFCNKGKLEEANRLLNEM 538



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 149/275 (54%), Gaps = 3/275 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ MV+K   P+ +    L+   C+   +  A KV E M   G+ P+  +Y  L+N LC 
Sbjct: 287 LKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCS 346

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A+ L +KM   G   N VTYN+L+ G C    L ++ + LD + ++GL PN  T
Sbjct: 347 NGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVIT 406

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L++A  K   +  A  L   ++  G  PN+ +YN L+ G C+EG  +EA +  +++ 
Sbjct: 407 FNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAE---MDGGDRSPTIVTYNILIGSLAYHG 322
             G + ++V+YNIL+ +LC +G   +A  LL E   M+   R   IVTYN+LI      G
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKG 526

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           K + A ++L+EM++    P+  +Y+ +   +  +G
Sbjct: 527 KLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 184/417 (44%), Gaps = 52/417 (12%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G I +   +  L++ L    N      L++      + +N+  ++SL     +LG+    
Sbjct: 102 GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL----SVLGSWG-- 155

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                         N+     L+ A  K   +  A++  D     G + + +S N +L  
Sbjct: 156 ------------CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS 203

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           L KEGR       ++++  +    NVV++++++  LC  G++++A +++ +M     SP+
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           ++TYN +I      GK   A  +L EMV  R  P+  ++N +I   C +  V    K  +
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 368 QMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           +M  +  +PN  TYN L                                  I  LC  GK
Sbjct: 324 EMQRQGLQPNVVTYNSL----------------------------------INGLCSNGK 349

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A  L  +M+  G  P+  TY++LI G C + +++EA E+   + +    P+V  FN 
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           L+    K+ R D +  +  MM++ G  PN +TY  L+ G   +  ++ + ++ KE++
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 15/273 (5%)

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           S + +  SL + G W  AN ++ +M              L+ +   +G+ D AL+  D  
Sbjct: 140 SNSTIFHSLSVLGSWGCANSIIVDM--------------LVWAYVKNGEMDLALEGFDRA 185

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKV 393
               FR SA S NP++  L  EG++ +V     +M  RR   N  T++  +  LC VGK 
Sbjct: 186 GDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKF 245

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           Q+A  +++ +     S     Y  +I   C+ GK ++A  LL EM      P+  T++ L
Sbjct: 246 QKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNIL 305

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G C +  +  A ++F  M+    +P+V  +N+L+ GLC + + D +L +   M   G 
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            PN  TY  L+ G   +  L+ + E+L ++  R
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKR 398


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 229/479 (47%), Gaps = 9/479 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + ++A+  L +M ++G KPDV+  T L+  LC A ++  A  V   M  S   PD  +Y 
Sbjct: 370 RFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI 429

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++     G+    M++   M+  GY  N V Y +++  LC +G + ++L+  D + QK
Sbjct: 430 TLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK 489

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+VP  ++Y+ L+    K      A++L   +   G KPN  ++ + +    K G + +A
Sbjct: 490 GIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKA 549

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I+ +  + SKG  P+VV+ N +L  L   GR   A  +  E+     SP  +TY ++I  
Sbjct: 550 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKC 609

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +   K D A+K+  +M++    P   + N +I  L   G+ D   +   Q+     +P 
Sbjct: 610 CSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPT 669

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           +GTYN  LA L   GKV+E   +++ + +         Y  ++  LC+ G    A  +LY
Sbjct: 670 DGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLY 729

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            MT  G  PD  +Y+++I GL  E    EA  IF  M++    PD      +L    K  
Sbjct: 730 SMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIG 788

Query: 497 RTDLSLEVFQ-MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
               +L + +   ++ G   + ++   L+EGI  +  +E      K ++  ++++ S +
Sbjct: 789 LMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE------KSIEFAEIIASSGI 841



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 229/498 (45%), Gaps = 40/498 (8%)

Query: 86  LERMVSKGHKPDVVQAT---NLLYDLCKAN-KMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           LER  S   KP V Q T   N + +L + + ++    +V ++M    +  +  ++  +  
Sbjct: 199 LERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFG 258

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            L  +G +  A   +  M++ G   N  TYN LV  L   G   ++L+    ++  G+VP
Sbjct: 259 GLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVP 318

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TYS L+ A  K R V   + LL ++ A G KPN+ SY + +  L +  R +EA R  
Sbjct: 319 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 378

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             + ++G +P+V+++ +L++ LC  GR  +A ++  +M   D+ P  VTY  L+     +
Sbjct: 379 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 438

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G +   +++ + M    +  +  +Y  +I  LC  G+V   ++  D+M  +   P + +Y
Sbjct: 439 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 498

Query: 382 N----GLAMLCGVGKVQEAFAIIQSLGNKQNS---------------SPQEFYKY----- 417
           N    G       G   E F  +   G K N                S +   +Y     
Sbjct: 499 NSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKS 558

Query: 418 ------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                       V+  L + G+   A ++ +E+   G +PD+ TY+ +I+        +E
Sbjct: 559 KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 618

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A++IF  M E +  PDV   N+L+  L K+ R D +  +F  + E    P + TY  L+ 
Sbjct: 619 AVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLA 678

Query: 526 GIAHQDELELSAEVLKEL 543
           G+  + +++    +L+E+
Sbjct: 679 GLGREGKVKEVMHLLEEM 696



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 232/543 (42%), Gaps = 84/543 (15%)

Query: 83   FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            F +L+ M   G  PD +  T ++    KA+K  +A+K+   M+ +  +PD  +   L++ 
Sbjct: 588  FHELKAM---GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDT 644

Query: 143  LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            L K G    A ++  ++++        TYN+L+ GL   G + + +  L+ +      PN
Sbjct: 645  LYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPN 704

Query: 203  AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              TY+ +L+   K   V+ A+ +L  +  KG  P+L SYN ++ GL KE R  EA   F 
Sbjct: 705  LITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFC 764

Query: 263  DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE--MDGGDRSPTIVTYNILIGSLAY 320
             +  K   P+  +   +L S    G  +EA  ++ +  +  G ++     ++++ G L  
Sbjct: 765  QM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKK 823

Query: 321  HG-------------------------------KTDHALKVLDEMVKGRFRPSAAS---- 345
             G                               K   AL+   E+VK +F+    S    
Sbjct: 824  AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA-HELVK-KFKSFGVSLKTG 881

Query: 346  -YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQ 401
             YN +I  L  E  +D+      +M    C P+E TYN   +L  +GK   ++E   + +
Sbjct: 882  LYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYN--LLLDAMGKSMRIEEMLKVQE 939

Query: 402  SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
             +  K   S    Y  +I+ L +  +  QA  L Y +   GF+P   TY  L+ GL   G
Sbjct: 940  EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 999

Query: 462  LIEEALEIFVVMEEYDYK-----------------------------------PDVDNFN 486
             IE+A  +F  M EY  K                                   PD+ ++ 
Sbjct: 1000 RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 1059

Query: 487  ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             ++  LCK+ + +  L  F+ ++E G  P+  TY +L++G+     LE +  +  E+Q +
Sbjct: 1060 IIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 1119

Query: 547  QVV 549
             +V
Sbjct: 1120 GIV 1122



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 217/463 (46%), Gaps = 13/463 (2%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++  +NDA   L  M +KG  PD+     ++Y L K  +  +A  +   M    +I
Sbjct: 713  DCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLI 771

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY----GYPTNTVTYNSLVRGLCMLGNLNQ 186
            PD ++   ++    K G +  A+ +++   DY    G  T+  + +SL+ G+     + +
Sbjct: 772  PDYATLCTILPSFVKIGLMKEALHIIK---DYFLQPGSKTDRSSCHSLMEGILKKAGIEK 828

Query: 187  SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
            S++F + +   G+  + F    L++   K++    A +L+    + G       YN L+ 
Sbjct: 829  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 888

Query: 247  GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            GL  E   + A   F ++   G  P+  +YN+LL ++    R EE  ++  EM       
Sbjct: 889  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 948

Query: 307  TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            T VTYN +I  L    + + A+ +   ++   F P+  +Y P++  L   G+++      
Sbjct: 949  TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF 1008

Query: 367  DQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            ++M    CK N   YN   +L G    G  ++   + Q + ++  +   + Y  +I +LC
Sbjct: 1009 NEMLEYGCKANCTIYN--ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLC 1066

Query: 424  RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            + G+         ++ + G  PD  TY+ LI GL     +EEA+ +F  M++    P++ 
Sbjct: 1067 KAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLY 1126

Query: 484  NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
             +N+L+L L K+ +   + ++++ ++ KG  PN  TY  L+ G
Sbjct: 1127 TYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1169



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 223/493 (45%), Gaps = 44/493 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  A + L  M   G   +      L+Y L K+   ++A++V  +M+  G++P   +Y+ 
Sbjct: 266 LRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSV 325

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+    K+ +V   + L+ +ME +G   N  +Y   +R L      +++ + L ++  +G
Sbjct: 326 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG 385

Query: 199 LVPNAFTYSFLLEA----------------------------------AYKERG-VHAAM 223
             P+  T++ L++                                    + + G   + M
Sbjct: 386 CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVM 445

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           ++ + + A G   N+V+Y  ++  LC+ GR  EA+  F ++  KG  P   SYN L+   
Sbjct: 446 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGF 505

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD--EMVKGR-FR 340
               R+ +A EL   MD     P   T+ + I    Y+GK+  ++K +   E++K +   
Sbjct: 506 LKADRFGDALELFKHMDIHGPKPNGYTHVLFIN---YYGKSGESIKAIQRYELMKSKGIV 562

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAI 399
           P   + N ++  L   G++ +  +   ++      P+  TY  +   C    K  EA  I
Sbjct: 563 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 622

Query: 400 IQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
              +  + N  P       +I +L + G+  +A+++ Y++ +    P   TY++L+ GL 
Sbjct: 623 FYDM-IENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLG 681

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            EG ++E + +   M   +Y P++  +N +L  LCK+   + +L++   M  KG +P+ +
Sbjct: 682 REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 741

Query: 519 TYTILVEGIAHQD 531
           +Y  ++ G+  ++
Sbjct: 742 SYNTVIYGLVKEE 754



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 214/474 (45%), Gaps = 9/474 (1%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R+ K+ +    LE M    + P+++    +L  LCK   +  A+ ++  M + G IPD S
Sbjct: 682  REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 741

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL-DR 193
            SY  ++  L K+     A  +  +M+    P +  T  +++     +G + ++L  + D 
Sbjct: 742  SYNTVIYGLVKEERYNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKDY 800

Query: 194  LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
             +Q G   +  +   L+E   K+ G+  +++  + I + G   +      L+  LCK+ +
Sbjct: 801  FLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKK 860

Query: 254  TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              EA    +   S G       YN L+  L  E   + A  L AEM      P   TYN+
Sbjct: 861  ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 920

Query: 314  LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
            L+ ++    + +  LKV +EM +  +  +  +YN II+ L    +++  +     +  + 
Sbjct: 921  LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 980

Query: 374  CKPNEGTYNGL-AMLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              P   TY  L   L   G++++A   F  +   G K N +    Y  ++      G T 
Sbjct: 981  FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT---IYNILLNGHRIAGNTE 1037

Query: 430  QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            +   L  +M   G  PD  +Y+ +I  LC  G + + L  F  + E   +PD+  +N L+
Sbjct: 1038 KVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLI 1097

Query: 490  LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             GL KS+R + ++ +F  M +KG +PN  TY  L+  +    +   + ++ +EL
Sbjct: 1098 DGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 192/441 (43%), Gaps = 42/441 (9%)

Query: 77   HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            H + D FLQ       G K D     +L+  + K   ++K+I+  E++ SSGI  D    
Sbjct: 795  HIIKDYFLQ------PGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFL 848

Query: 137  TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              L+  LCK+     A +LV+K + +G    T  YNSL+ GL                + 
Sbjct: 849  CPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL----------------VD 892

Query: 197  KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            + L+  A              G+ A MK L      G  P+  +YN+LL  + K  R EE
Sbjct: 893  ENLIDIA-------------EGLFAEMKEL------GCGPDEFTYNLLLDAMGKSMRIEE 933

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
             ++   ++  KG+E   V+YN ++  L    R E+A +L   +     SPT  TY  L+ 
Sbjct: 934  MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLD 993

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             L   G+ + A  + +EM++   + +   YN ++      G  + V      M  +   P
Sbjct: 994  GLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP 1053

Query: 377  NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            +  +Y  +   LC  G++ +     + L           Y  +I  L +  +  +A  L 
Sbjct: 1054 DIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 1113

Query: 436  YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             EM K G  P+ YTY+SLI  L   G   EA +++  +    +KP+V  +NAL+ G   S
Sbjct: 1114 NEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVS 1173

Query: 496  RRTDLSLEVFQMMIEKGQMPN 516
              TD +   +  MI  G +PN
Sbjct: 1174 GSTDSAYAAYGRMIVGGCLPN 1194



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 188/419 (44%), Gaps = 34/419 (8%)

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +S  Y++  +   G VG   ++ + M+      N  T+ ++  GL + G L  +   L  
Sbjct: 216 ASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPV 275

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + + G+V NA+TY+ L+    K      A+++   ++  G  P++ +Y+VL+    K   
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 335

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            E  +   R++ + G +PNV SY I +R L    R++EA  +LA+M+     P ++T+ +
Sbjct: 336 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 395

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  L   G+   A  V  +M K   +P   +Y  ++ +    G                
Sbjct: 396 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ------------- 442

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
                              V E +  +++ G   N      Y  VI +LC+ G+ ++A +
Sbjct: 443 ------------------SVMEIWNAMKADGYNDNVVA---YTAVIDALCQVGRVFEALE 481

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  EM + G  P+ Y+Y+SLI G        +ALE+F  M+ +  KP+       +    
Sbjct: 482 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYG 541

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           KS  +  +++ +++M  KG +P+      ++ G+A    L ++  V  EL+   V  ++
Sbjct: 542 KSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT 600



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  ++ +     E M  KG++   V    ++  L K+ ++++AI +   ++S G  
Sbjct: 923  DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 982

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L++ L K G +  A  L  +M +YG   N   YN L+ G  + GN  +    
Sbjct: 983  PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 1042

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
               ++ +G+ P+  +Y+ +++   K   ++  +     ++  G +P+L++YN+L+ GL K
Sbjct: 1043 FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 1102

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              R EEA+  F ++  KG  PN+ +YN L+  L   G+  EA ++  E+      P + T
Sbjct: 1103 SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1162

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            YN LI   +  G TD A      M+ G   P+
Sbjct: 1163 YNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 209/422 (49%), Gaps = 2/422 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+N+A+  L+RM  +G  PDVV  T L+  LC A K+  A +V E M +    PD  
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++      ++    Q   +ME  G+  + VT+  LV  LC  GN  ++   LD +
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G++PN  TY+ L+    +   +  A++L  ++ + G KP   +Y V +    K G +
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+  F  + +KG  PN+V+ N  L SL   GR  EA ++   +      P  VTYN++
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+ D A+K+L EM++    P     N +I  L    +VD   K   +M   + 
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP   TYN  LA L   GK+QEA  + + +  K        +  +   LC+  +   A +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L++M   G  PD +TY+++I GL   G ++EA+  F  M++  Y PD      LL G+ 
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVV 688

Query: 494 KS 495
           K+
Sbjct: 689 KA 690



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 236/561 (42%), Gaps = 112/561 (19%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            +T ++  ++++A+    RM     KP VV    LL  L K  K+++AI++ E MV  G  
Sbjct: 546  NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  ++  L +CLCK   V  A++++ KM D G   +  TYN+++ GL   G + +++ F
Sbjct: 606  PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK--------------------LLDDII 230
              ++ +K + P+  T   LL    K   +  A K                    L+  I+
Sbjct: 666  FHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL 724

Query: 231  AKGGKPNLVSYN--VLLTGLCKEGRT---------------------------------- 254
            A+ G  N VS++  ++  G+C++G +                                  
Sbjct: 725  AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784

Query: 255  -----------------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
                             E A   F  + S G  P+V +YN LL +    G+ +E  EL  
Sbjct: 785  LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844

Query: 298  EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSE 356
            EM   +     +T+NI+I  L   G  D AL +  +++  R F P+A +Y P+I  L   
Sbjct: 845  EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904

Query: 357  GKVDLVVKCLDQMFHRRCKPNEGTYNGLA------------------------------- 385
            G++    +  + M    C+PN   YN L                                
Sbjct: 905  GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964

Query: 386  -----MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM-T 439
                  LC VG+V E     + L     +     Y  +I  L +  +  +A  L  EM T
Sbjct: 965  SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024

Query: 440  KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
              G TPD YTY+SLI  L + G++EEA +I+  ++    +P+V  FNAL+ G   S + +
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084

Query: 500  LSLEVFQMMIEKGQMPNETTY 520
             +  V+Q M+  G  PN  TY
Sbjct: 1085 HAYAVYQTMVTGGFSPNTGTY 1105



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 220/463 (47%), Gaps = 1/463 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  A   L +M   G   +      L++ L K+    +A++V   M+  G  P   +Y+ 
Sbjct: 169 LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L K+ ++   M L+++ME  G   N  T+   +R L   G +N++ + L R+  +G
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY+ L++A    R +  A ++ + +     KP+ V+Y  LL         +   
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK 348

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +F+ ++   G  P+VV++ IL+ +LC  G + EA + L  M      P + TYN LI  L
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + D AL++   M     +P+A +Y   I      G     ++  ++M  +   PN 
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
              N  L  L   G+ +EA  I   L +         Y  ++    + G+  +A +LL E
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + G  PD    +SLI  L     ++EA ++F+ M+E   KP V  +N LL GL K+ +
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
              ++E+F+ M++KG  PN  T+  L + +   DE+ L+ ++L
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 210/457 (45%), Gaps = 2/457 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKG 147
           M+ K  KPD+  +  +   L        +    + +  +  ++    +  Y++  L   G
Sbjct: 73  MIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDG 132

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +     + + M+      +T TY ++ + L + G L Q+   L ++ + G V NA++Y+
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+    K R    AM++   +I +G +P+L +Y+ L+ GL K    +  +   +++ + 
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G +PNV ++ I +R L   G+  EA E+L  MD     P +VTY +LI +L    K D A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
            +V ++M  GR +P   +Y  ++ R      +D V +   +M      P+  T+  L   
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  G   EAF  +  + ++        Y  +I  L R  +   A +L   M   G  P 
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           +YTY   I      G    ALE F  M+     P++   NA L  L K+ R   + ++F 
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + + G +P+  TY ++++  +   E++ + ++L E+
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 11/383 (2%)

Query: 114  MKKAIKVMEMMVSSGIIPDASSYTY-LVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTY 171
            +  A+   E +V++GI  D  S    ++   CK  NV  A  L EK  +D G      TY
Sbjct: 729  IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTY 788

Query: 172  NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
            N L+ GL     +  +     ++   G +P+  TY+FLL+A  K   +    +L  ++  
Sbjct: 789  NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848

Query: 232  KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWE 290
               + N +++N++++GL K G  ++A+  + DL S + F P   +Y  L+  L   GR  
Sbjct: 849  HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908

Query: 291  EANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            EA +L   M D G R P    YNILI      G+ D A  +   MVK   RP   +Y+ +
Sbjct: 909  EAKQLFEGMLDYGCR-PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 967

Query: 350  IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNK 406
            +  LC  G+VD  +    ++      P+   YN   ++ G+GK   ++EA  +   +   
Sbjct: 968  VDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN--LIINGLGKSHRLEEALVLFNEMKTS 1025

Query: 407  QNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
            +  +P  + Y  +I +L   G   +A ++  E+ + G  P+ +T+++LIRG  + G  E 
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085

Query: 466  ALEIFVVMEEYDYKPDVDNFNAL 488
            A  ++  M    + P+   +  L
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 146/306 (47%), Gaps = 5/306 (1%)

Query: 81   DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
            D FLQ++   S G  PDV     LL    K+ K+ +  ++ + M +     +  ++  ++
Sbjct: 806  DVFLQVK---STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862

Query: 141  NCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
            + L K GNV  A+ L  + M D  +     TY  L+ GL   G L ++ Q  + ++  G 
Sbjct: 863  SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922

Query: 200  VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
             PN   Y+ L+    K     AA  L   ++ +G +P+L +Y+VL+  LC  GR +E + 
Sbjct: 923  RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982

Query: 260  FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIVTYNILIGSL 318
            +F++L   G  P+VV YN+++  L    R EEA  L  EM      +P + TYN LI +L
Sbjct: 983  YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042

Query: 319  AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               G  + A K+ +E+ +    P+  ++N +I      GK +        M      PN 
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102

Query: 379  GTYNGL 384
            GTY  L
Sbjct: 1103 GTYEQL 1108



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 396 AFAIIQSL-GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +F+  +S+ GN       E   Y++ +L   GK  +   +   M K     D+ TY ++ 
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIF 160

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           + L ++G +++A      M E+ +  +  ++N L+  L KSR    ++EV++ MI +G  
Sbjct: 161 KSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR 220

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
           P+  TY+ L+ G+  + +++    +LKE++
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 218/452 (48%), Gaps = 21/452 (4%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M+     PDVV    L++ LCK  K + A+ + + M   GI+P+   Y+ +++ LC+  
Sbjct: 188 QMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAK 247

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A +L  KM   G   + +TYN L+ G C  G L+ +   L  L + G +     Y 
Sbjct: 248 KIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYG 307

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+   ++ R    A      ++ +  KP+++ Y +++ GL +EGR  EA+    ++  +
Sbjct: 308 CLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+ + YN L++  C  G  +EA  L  E+   D  P   TY+ILI  +  +G  + A
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
             +  EM K    PS  ++N +I  LC   +++       QM   R KP+      L + 
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR-KPSL----FLRLS 482

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
            G  KV +    I SL            + ++  LC  G   +A++LL ++   G  PD 
Sbjct: 483 QGTDKVFD----IASL------------QVMMERLCESGMILKAYKLLMQLVDSGVLPDI 526

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ LI G C  G I  A ++F  M+   + PD   +  L+ GL ++ R + +LE+F+ 
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ 586

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           M++KG +P  +TY  ++     ++ + L+  V
Sbjct: 587 MVKKGCVPESSTYKTIMTWSCRENNISLALSV 618



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/503 (23%), Positives = 217/503 (43%), Gaps = 49/503 (9%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           L K N  +   KV++ + +S I   + +++ L+    + G    A++    M D+    +
Sbjct: 103 LIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPD 162

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
              +N ++  L        +L   +++++  L P+  TY  L+    K      A+ L D
Sbjct: 163 LFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFD 222

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           ++  +G  PN + Y+++L+GLC+  +  +A R F  + + G   ++++YN+LL   C  G
Sbjct: 223 EMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSG 282

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
             ++A  LL  +        ++ Y  LI  L    + + A     +M++   +P    Y 
Sbjct: 283 YLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYT 342

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            +I  L  EG+V   +  L +M  R  +P+   YN L    C +G + EA ++   +   
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  +I  +C+ G   +A  +  EM K G  P   T++SLI GLC    +EEA
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462

Query: 467 LEIFVVME-----------------EYD--------------------YK---------- 479
             +F  ME                  +D                    YK          
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGV 522

Query: 480 -PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            PD+  +N L+ G CK    + + ++F+ M  KG MP+  TY  L++G+      E + E
Sbjct: 523 LPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALE 582

Query: 539 VLKELQLRQVVSESAVERLVMQY 561
           + +++  +  V ES+  + +M +
Sbjct: 583 IFEQMVKKGCVPESSTYKTIMTW 605



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/469 (24%), Positives = 209/469 (44%), Gaps = 22/469 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  DA +  + M  +G  P+ +  + +L  LC+A K+  A ++   M +SG   D  +Y 
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYN 272

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK G +  A  L++ +   G+    + Y  L+ GL       ++  +  +++++
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE 332

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+   Y+ ++    +E  V  A+ LL ++  +G +P+ + YN L+ G C  G  +EA
Sbjct: 333 NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA 392

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                ++      PN  +Y+IL+  +C  G   +A  +  EM+     P++VT+N LI  
Sbjct: 393 ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLING 452

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    + + A  +  +M   R +PS      +  RL         +  L  M  R     
Sbjct: 453 LCKANRLEEARLLFYQMEIVR-KPS------LFLRLSQGTDKVFDIASLQVMMER----- 500

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
                    LC  G + +A+ ++  L +         Y  +I   C+ G    AF+L  E
Sbjct: 501 ---------LCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKE 551

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PDS TY +LI GL   G  E+ALEIF  M +    P+   +  ++   C+   
Sbjct: 552 MQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENN 611

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             L+L V+   +   +   +    ++ E   ++ EL+ +   L E+ ++
Sbjct: 612 ISLALSVWMKYLRDFRGWEDEKVRVVAESFDNE-ELQTAIRRLLEMDIK 659



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/442 (22%), Positives = 188/442 (42%), Gaps = 15/442 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  +A +  ++M+ +  KPDV+  T ++  L +  ++ +A+ ++  M   G+ PD  
Sbjct: 315 RARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTI 374

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L+   C  G +  A  L  ++  +    N  TY+ L+ G+C  G +N++      +
Sbjct: 375 CYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEM 434

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL--------------VS 240
            + G +P+  T++ L+    K   +  A +LL   +    KP+L               S
Sbjct: 435 EKLGCLPSVVTFNSLINGLCKANRLEEA-RLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
             V++  LC+ G   +A +    L   G  P++ +YNIL+   C  G    A +L  EM 
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQ 553

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P  VTY  LI  L   G+ + AL++ ++MVK    P +++Y  I+   C E  + 
Sbjct: 554 LKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNIS 613

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
           L +    +         +     +A      ++Q A   +  +  K  +     Y   + 
Sbjct: 614 LALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLI 673

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            L +  +  +AF +   +  +     S +   LI  LCM   ++ A+++F+   E  ++ 
Sbjct: 674 GLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRL 733

Query: 481 DVDNFNALLLGLCKSRRTDLSL 502
                N LL  L    R D +L
Sbjct: 734 MPPICNQLLCNLLHLDRKDDAL 755



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 139/340 (40%), Gaps = 38/340 (11%)

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           ++++  L KE   E   +  ++L +   + +  ++++L+ +    G  E+A E    M  
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
            D  P +  +N+++  L        AL V ++M+K    P   +Y  +I  LC   K   
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 362 VVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            +   D+M  R   PN+  Y+  L+ LC   K+ +A  +   +     +     Y  ++ 
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 421 SLCRKGKTYQAFQLLYEMTKYG-----------------------------------FTP 445
             C+ G    AF LL  +TK G                                     P
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D   Y+ +IRGL  EG + EAL +   M E   +PD   +NAL+ G C     D   E  
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD-EAESL 395

Query: 506 QMMIEKGQ-MPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++ I K    PN  TY+IL+ G+     +  +  + KE++
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEME 435



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 69/142 (48%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  L ++      +++L E+        S  +S LI      G+ E+A+E F +M ++D
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            KPD+  FN +L  L +     L+L V+  M++    P+  TY IL+ G+    + + + 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 538 EVLKELQLRQVVSESAVERLVM 559
            +  E+  R ++    +  +V+
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVL 240


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 213/450 (47%), Gaps = 39/450 (8%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P    A    + LC+ N++  A K+++ M   G  PD  +Y  +V+ LCK   +  A ++
Sbjct: 134 PHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEV 193

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +  M     P    +YN++V  LC    + +    +  ++ +GL PN  TY+ +++A  K
Sbjct: 194 LAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCK 248

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  A  +L  ++  G  PN+V++  L+ GL  +GR  +A+  +R + ++G+ P+ VS
Sbjct: 249 AGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVS 308

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YNIL+R LC  G  + A+ +L  M+     P + TY+ LI   +  G    A+ + ++M 
Sbjct: 309 YNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMS 368

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +   +P+   Y  ++   C +   +     +D+M    C PN  T+N L           
Sbjct: 369 RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL----------- 417

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
                                  I SLC   +  +A  + +EM ++G  P+  TY+ LI 
Sbjct: 418 -----------------------IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIH 454

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GL  EG   +AL +   M+ +  +  +  +N ++ GLC++R +  ++     MI +G  P
Sbjct: 455 GLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQP 514

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQL 545
           N  T++ ++     + E+ ++A +L  + +
Sbjct: 515 NAFTFSAIIHAYCKEGEVRMAAWMLGAMNV 544



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 207/454 (45%), Gaps = 6/454 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +++++  A   L+ M  KG  PD V    ++  LCK +++ +A +V+  M      P A+
Sbjct: 148 QNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAA 202

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  +V  LC++  +     +V  M   G   N +TY ++V   C  G L  +   L R+
Sbjct: 203 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 262

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  PN  T++ L+   + +  VH A+ +   ++A+G  P+ VSYN+L+ GLC  G  
Sbjct: 263 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 322

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A      +   G  PNV +Y+ L+      G    A  +  +M      P +V Y  +
Sbjct: 323 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNM 382

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +         + A  ++D+M+     P+  ++N +I  LC   +V   +    +M    C
Sbjct: 383 VDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC 442

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  TYN L   L   G   +A  ++  + +         Y  V++ LC+   + +A  
Sbjct: 443 VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMV 502

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
            + +M   G  P+++T+S++I   C EG +  A  +   M   +   ++  +  L+  LC
Sbjct: 503 FVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELC 562

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
              +   ++     M+ +G  PN  T+ +LV G+
Sbjct: 563 NQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 17/242 (7%)

Query: 315 IGSLAYHGKTDHALKVLDEMVK--GRFRPS-AASYNPIIAR--------LCSEGKVDLVV 363
           +G+ A  G  D ALK     V   G  RP  AA+  P   R        LC   +V    
Sbjct: 97  VGAFARAGAPDRALKTFYRAVHDLGCARPHRAAALQPPHRRAAAGRTWALCQNNRVGAAR 156

Query: 364 KCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           K LD+M  + C P++ TY  + ++LC + ++ EA  ++ ++     S     Y  ++ +L
Sbjct: 157 KMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAAS-----YNAIVLAL 211

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           CR+ +  + F ++ +M   G  P+  TY++++   C  G +  A  I   M      P+V
Sbjct: 212 CREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNV 271

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             F AL+ GL    R   +L++++ M+ +G  P+  +Y IL+ G+    +L+ ++ +L  
Sbjct: 272 VTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNS 331

Query: 543 LQ 544
           ++
Sbjct: 332 ME 333



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 71/144 (49%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+    DA   +  M S G +  +V    ++  LC+    ++A+  +  M+  GI P+A 
Sbjct: 458 REGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAF 517

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +++ +++  CK+G V  A  ++  M       N + Y  L+  LC    L  ++ +L ++
Sbjct: 518 TFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKM 577

Query: 195 IQKGLVPNAFTYSFLLEAAYKERG 218
           + +G+ PN  T++ L+   ++  G
Sbjct: 578 LYEGIYPNTVTWNVLVRGVFRNLG 601


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 212/453 (46%), Gaps = 38/453 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DAFL L       H+P       LL  L  A ++  A K     +   + PD  ++  ++
Sbjct: 140 DAFL-LAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVI 198

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM---LGNLNQSLQFLDRLIQK 197
           + LC+ G +  A  + + ++ +G   +  TYNSL+ G C     GN+      L  +++ 
Sbjct: 199 SGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEA 258

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P A T+  L+    K     AA+++ +++  +G   ++V+YN L++GLC EG+ EE 
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++   ++   G  PN +++  +L+  C +G   +AN+ +  M   +  P +V Y ILI  
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDG 378

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK + A+ V + M K    P+  +YN +I      G        LD+M  +  + +
Sbjct: 379 YRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  I +LC KG+  +A +LL E
Sbjct: 439 VVTYNVL----------------------------------IGALCCKGEVRKAVKLLDE 464

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M++ G  P+  TY+++I+G C +G I+ A EI   ME+   + +V  +N  +   C+  +
Sbjct: 465 MSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGK 524

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            D + ++   M++K  +PN  TY  + EG+  +
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEK 557



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 177/358 (49%), Gaps = 20/358 (5%)

Query: 93  GHKPDVVQATNLLYDLCK---ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           G  P V    +L+   CK   A  M     +++ MV +GI P A ++  L+N  CK  N 
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             A+++ E+M+  G   + VTYNSL+ GLC  G + + ++ ++ +   GL PN  T+  +
Sbjct: 281 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 340

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           L+   K+  +  A   +D +  +  +P++V Y +L+ G  + G+ E+A+     +  KG 
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGI 400

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            PNV +YN L+      G W  A+ LL EM        +VTYN+LIG+L   G+   A+K
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLC 388
           +LDEM +    P+  +YN II   C +G +    +   +M   R + N  TYN  +   C
Sbjct: 461 LLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFC 520

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            +GK+ EA  ++  + +K               L   G TY+  +    M + G+TPD
Sbjct: 521 QIGKMDEANDLLNEMLDK--------------CLVPNGITYETIK--EGMMEKGYTPD 562



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 4/348 (1%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+  + + LL      + V  A K     + +   P++ ++N +++GLC+ G+  +A   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEG---RWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +D+ + G  P+V +YN L+   C +G        + LL EM     SPT VT+ +LI  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +  T  A++V +EM +     S  +YN +I+ LCSEGKV+  VK +++M      PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           E T+   L   C  G + +A   I  +  +        Y  +I    R GK   A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M K G +P+  TY+ LI G    G    A  +   M+E   + DV  +N L+  LC   
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               ++++   M E G  PN  TY  +++G   +  ++ + E+   ++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRME 501



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 146/320 (45%), Gaps = 42/320 (13%)

Query: 65  KPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM 124
           K G   +  H D       + L+ MV  G  P  V    L+   CK +    A++V E M
Sbjct: 238 KKGGAGNMYHVD-------MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM 290

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC----- 179
              GI     +Y  L++ LC +G V   ++L+E+MED G   N +T+  +++G C     
Sbjct: 291 KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMM 350

Query: 180 ------------------------------MLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
                                          LG +  ++   + + +KG+ PN  TY+ L
Sbjct: 351 ADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCL 410

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           +    +     +A  LLD++  KG + ++V+YNVL+  LC +G   +A++   ++   G 
Sbjct: 411 ITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           EPN ++YN +++  C +G  + A E+   M+   +   +VTYN+ I      GK D A  
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAND 530

Query: 330 VLDEMVKGRFRPSAASYNPI 349
           +L+EM+     P+  +Y  I
Sbjct: 531 LLNEMLDKCLVPNGITYETI 550



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 43/331 (12%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P+  S N LL GL    R + A + FR    +   P++ ++N ++  LC  G+  +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTD---HALKVLDEMVKGRFRPSAASYNPIIA 351
           +  ++     +P++ TYN LI      G      H   +L EMV+    P+A ++  +I 
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
             C        V+  ++M  +    +  TYN L                           
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSL--------------------------- 305

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
                  I+ LC +GK  +  +L+ EM   G +P+  T+  +++G C +G++ +A +   
Sbjct: 306 -------ISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M E + +PDV  +  L+ G  +  + + ++ V + M +KG  PN TTY  L+ G +   
Sbjct: 359 GMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVMQYD 562
           +   ++ +L E++      E  +E  V+ Y+
Sbjct: 419 DWRSASGLLDEMK------EKGIEADVVTYN 443



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 117/249 (46%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + K+ +    +E M   G  P+ +    +L   CK   M  A   ++ M    + PD   
Sbjct: 312 EGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVI 371

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L++   + G +  AM + E M   G   N  TYN L+ G    G+   +   LD + 
Sbjct: 372 YTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +KG+  +  TY+ L+ A   +  V  A+KLLD++   G +PN ++YN ++ G C +G  +
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A      +       NVV+YN+ ++  C  G+ +EAN+LL EM      P  +TY  + 
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIK 551

Query: 316 GSLAYHGKT 324
             +   G T
Sbjct: 552 EGMMEKGYT 560



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 93/186 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K+ DA    E M  KG  P+V     L+    ++   + A  +++ M   GI 
Sbjct: 377 DGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L+  LC KG V  A++L+++M + G   N +TYN++++G C  GN+  + + 
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ +     N  TY+  ++   +   +  A  LL++++ K   PN ++Y  +  G+ +
Sbjct: 497 RTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556

Query: 251 EGRTEE 256
           +G T +
Sbjct: 557 KGYTPD 562


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 248/550 (45%), Gaps = 56/550 (10%)

Query: 74   HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
            HR + + +AF   + MV  GH P+V    NLL  LC+   + +A + M  ++      D 
Sbjct: 460  HRGN-IVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDE 518

Query: 134  SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             ++  L+  +CK G +  A+ L EKM       +  TY  L+ G C  G +  +L  L  
Sbjct: 519  KTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQM 578

Query: 194  LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------------------- 234
            ++ KG+VP+   Y+ LL     E  V AA  +  +II K G                   
Sbjct: 579  MLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGG 638

Query: 235  -----------------KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                              PN  SYN+L+ G  K G+  +++  ++ +  KG  P+ V+Y 
Sbjct: 639  NINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYR 698

Query: 278  ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            +L+  L   G  + A + L +M      P  + ++ILI + +   K  +AL++ + M   
Sbjct: 699  LLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWL 758

Query: 338  RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA 396
            R  PS+ +Y+ +I  L  +  +D   + L +M     +PN   Y  L    C VGK+  A
Sbjct: 759  RMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRA 818

Query: 397  FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            F + + +              +I  LC+ GK  +A  +   M + G  P   T+++L+  
Sbjct: 819  FRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHC 878

Query: 457  LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            LC E  I +AL +  +ME    K DV ++N L+ GLCK +R   +L++++ M  KG  PN
Sbjct: 879  LCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPN 938

Query: 517  ETTYTILVEGIAHQDELELSAEVLKELQLRQVVS------------ESAVERLVM----- 559
             TTY  L   +     ++   E+L++++ R ++             E A+ RL M     
Sbjct: 939  VTTYITLTGAMYSTGIMQNGEELLEDIEERGLIPVYVQLENLERQMEDAIRRLNMIRNCR 998

Query: 560  -QYDFEGIEV 568
             +  F G+E+
Sbjct: 999  KEVPFRGVEL 1008



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 193/436 (44%), Gaps = 19/436 (4%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  LV    K+  V  A   V  M+D G+  + +  N+++R L   G       FL   +
Sbjct: 156 FELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESL 215

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
                 +  T + LL +         A  +L  +       N V+YN +L    K+GR +
Sbjct: 216 AHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KTCRLSNSVTYNTILHWYVKKGRFK 274

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+    D+       ++ +YNI++  LC   R   A  LL  M   D  P   TYN LI
Sbjct: 275 AALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLI 334

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 GK +HA  V + M++  F PS A+Y  +I   C   ++D  +  L +M      
Sbjct: 335 NGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVM 394

Query: 376 PNEGTY----------NGL-------AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           P+E +           +G+       + L   G + EA    Q +   + S     +  +
Sbjct: 395 PSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCI 454

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I S C +G   +AF +   M +YG +P+  TY +L+RGLC  G + +A +    + +   
Sbjct: 455 IDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPS 514

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
             D   FNALLLG+CK    D +L++ + M++   +P+  TYTIL+ G   + ++ L A 
Sbjct: 515 AIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKI-LPAL 573

Query: 539 VLKELQLRQVVSESAV 554
           ++ ++ L + V    V
Sbjct: 574 IMLQMMLDKGVVPDTV 589



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/531 (22%), Positives = 234/531 (44%), Gaps = 64/531 (12%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            +L L   ++     DV     LL  LC   + +KA  +++ M +  +  ++ +Y  +++
Sbjct: 207 VWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRL-SNSVTYNTILH 265

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
              KKG    A+ ++E ME    P +  TYN ++  LC +    ++   L R+ +  L+P
Sbjct: 266 WYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIP 325

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  TY+ L+   + E  ++ A  + + ++ +   P++ +Y  ++ G C+  R ++A+   
Sbjct: 326 DECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVL 385

Query: 262 RD------LPSK--------------GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
            +      +PS+              G +P++V+Y+ L+     EG   EA      M  
Sbjct: 386 SEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALIN----EGMITEAEHFRQYMSR 441

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              S   V++N +I S  + G    A  V D MV+    P+  +Y  ++  LC  G +  
Sbjct: 442 MKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQ 501

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVI 419
             + +  +       +E T+N L + +C  G + EA  + + +  K N  P    Y  ++
Sbjct: 502 AKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMV-KNNCLPDIHTYTILL 560

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYD 477
           +  CRKGK   A  +L  M   G  PD+  Y+ L+ GL  EG ++ A  +F  ++ +E  
Sbjct: 561 SGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGL 620

Query: 478 YK----------------------------------PDVDNFNALLLGLCKSRRTDLSLE 503
           Y                                   P+  ++N L+ G  K  +   SL 
Sbjct: 621 YADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLY 680

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           +++ M+ KG  P+  TY +L+ G++    ++++ + L+++ L  +  +  V
Sbjct: 681 LYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLV 731



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/484 (21%), Positives = 203/484 (41%), Gaps = 36/484 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +   A   LE M       D+     ++  LC+  +  +A  +++ M    +IPD  +Y 
Sbjct: 272 RFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYN 331

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC------------------ 179
            L+N    +G + +A  +   M    +  +  TY +++ G C                  
Sbjct: 332 TLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQIT 391

Query: 180 --MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH-----AAMKLLDDIIAK 232
             M   ++++ Q L  +++ G+ P+  TYS L+         H     + MK+  D    
Sbjct: 392 GVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDS--- 448

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
                 VS+N ++   C  G   EA   +  +   G  PNV +Y  LLR LC  G   +A
Sbjct: 449 ------VSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQA 502

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
            + +  +     +    T+N L+  +  +G  D AL + ++MVK    P   +Y  +++ 
Sbjct: 503 KQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSG 562

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
            C +GK+   +  L  M  +   P+   Y  L   L   G+V+ A  + Q +  K+    
Sbjct: 563 FCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYA 622

Query: 412 QEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  ++    + G      +++ +M +    P+S +Y+ L+ G    G   ++L ++
Sbjct: 623 DCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLY 682

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M     +PD   +  L+LGL +    D++++  + M+ +G  P+   + IL+   + +
Sbjct: 683 KYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEK 742

Query: 531 DELE 534
            ++ 
Sbjct: 743 SKMH 746



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 39/293 (13%)

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           II++    N V + +L+    KE +  +A      +   GF+ + ++ N +LR+L  +G 
Sbjct: 144 IISRFDSTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGE 203

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            +     L E    +    + T NIL+ SL  +G+   A  +L +M   R   S  +YN 
Sbjct: 204 SKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNS-VTYNT 262

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN 408
           I+                    H   K               G+ + A  +++ +  +++
Sbjct: 263 IL--------------------HWYVKK--------------GRFKAALCVLEDM--ERD 286

Query: 409 SSPQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           S P + Y Y  +I  LCR  ++ +AF LL  M K    PD  TY++LI G   EG I  A
Sbjct: 287 SIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHA 346

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
             +F  M    + P V  +  ++ G C++RR D +L V   M   G MP+E +
Sbjct: 347 HYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEIS 399


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 217/432 (50%), Gaps = 1/432 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P V     LL+ L K++K   A+   + MV +G+ P   +Y  ++ CL ++G++  A  L
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            E+M+  G   + VTYNSL+ G   +G L  ++   + +   G  P+  TY+ L+    K
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  A + L  +  +G +PN+V+Y+ L+   CK G   EA +FF D+   G +PN  +
Sbjct: 334 FERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFT 393

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+ + C  G   EA +L +EM     +  IVTY  L+  L   G+   A ++   ++
Sbjct: 394 YTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL 453

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY-NGLAMLCGVGKVQ 394
           K  +  +   Y  +         ++  +  L++M  +  KP+   Y   +  LC   +++
Sbjct: 454 KAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIE 513

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           ++ A+I+ + +   ++    Y  +I +  + GKT +A  LL EM   G      TY  LI
Sbjct: 514 DSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLI 573

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC  GL+++A+  F  M     +P++  + AL+ GLCK+   + +  +F  M++KG  
Sbjct: 574 DGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGIS 633

Query: 515 PNETTYTILVEG 526
           P++  YT L++G
Sbjct: 634 PDKLVYTSLIDG 645



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 223/489 (45%), Gaps = 4/489 (0%)

Query: 70  NDTRHRDHKLNDAFLQL---ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS 126
           N+  HR  K +   L L   + MV  G  P V     ++  L +   ++ A  + E M +
Sbjct: 220 NELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKA 279

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
            G+ PD  +Y  L++   K G +  A+ + E+M+D G   + +TYNSL+   C    + Q
Sbjct: 280 KGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQ 339

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           + ++L  + Q+GL PN  TYS L++A  K   +  A K   D+I  G +PN  +Y  L+ 
Sbjct: 340 AFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLID 399

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
             CK G   EA +   ++   G   N+V+Y  LL  LC +GR  EA EL   +     + 
Sbjct: 400 ANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTL 459

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
               Y  L          + A+ +L+EM K   +P    Y   I  LC + +++  +  +
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVI 519

Query: 367 DQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            +M       N   Y  L      VGK  EA  ++Q + +         Y  +I  LC+ 
Sbjct: 520 REMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKI 579

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G   QA +    MT+ G  P+   Y++LI GLC    +EEA  +F  M +    PD   +
Sbjct: 580 GLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVY 639

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            +L+ G  K      +L +   M+E G   +   YT L+ G +   +++L+  +L E+  
Sbjct: 640 TSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLR 699

Query: 546 RQVVSESAV 554
           + ++ +  +
Sbjct: 700 KGIIPDQVL 708



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 190/449 (42%), Gaps = 36/449 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    +  L N L   G +  A Q   KM  +       + N L+  L        +L F
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  GL P+ FTY+ ++    +E  + AA  L +++ AKG +P++V+YN L+ G  K
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G    A+  F ++   G EP+V++YN L+   C   R  +A E L  M      P +VT
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ LI +    G    A K   +M++   +P+  +Y  +I   C  G ++   K   +M 
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLG---------------------- 404
                 N  TY  L   LC  G+++EA   F  +   G                      
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMME 478

Query: 405 ---------NKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
                    NK+N  P    Y   I  LCR+ +   +  ++ EM   G T +SY Y++LI
Sbjct: 479 KAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLI 538

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
                 G   EA+ +   M++   K  V  +  L+ GLCK      ++  F  M   G  
Sbjct: 539 DAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQ 598

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
           PN   YT L++G+   D LE +  +  E+
Sbjct: 599 PNIMIYTALIDGLCKNDCLEEAKNLFNEM 627



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 183/399 (45%), Gaps = 13/399 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  AF  L  M  +G +P+VV  + L+   CKA  + +A K    M+  G+ P+  +YT
Sbjct: 336 RIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYT 395

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK G++  A +L  +M+  G   N VTY +L+ GLC  G + ++ +    L++ 
Sbjct: 396 SLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKA 455

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   N   Y+ L     K + +  AM +L+++  K  KP+L+ Y   + GLC++   E++
Sbjct: 456 GWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDS 515

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   R++   G   N   Y  L+ +    G+  EA  LL EM       T+VTY +LI  
Sbjct: 516 MAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDG 575

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G    A++  D M +   +P+   Y  +I  LC    ++      ++M  +   P+
Sbjct: 576 LCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635

Query: 378 EGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEF----YKYVITSLCRKGKTYQ 430
           +  Y  L  + G    G   EA     SL N+      E     Y  +I    R G+   
Sbjct: 636 KLVYTSL--IDGNMKHGNPGEAL----SLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQL 689

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           A  LL EM + G  PD      L+R     G I EAL +
Sbjct: 690 AKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALAL 728



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 1/310 (0%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P    ++ L   L   G  EEA + F  +      P V S N LL  L    +   A  
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
              +M     SP++ TYN++IG LA  G  + A  + +EM     RP   +YN +I    
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
             G +   V   ++M    C+P+  TYN L    C   ++ +AF  +  +  +       
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I + C+ G   +A +   +M + G  P+ +TY+SLI   C  G + EA ++   M
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           ++     ++  + ALL GLC+  R   + E+F  +++ G   N+  YT L  G      +
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 534 ELSAEVLKEL 543
           E + ++L+E+
Sbjct: 478 EKAMDILEEM 487



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 96/208 (46%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K  +A   L+ M   G K  VV    L+  LCK   +++A++  + M  +G+ 
Sbjct: 539 DAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQ 598

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   YT L++ LCK   +  A  L  +M D G   + + Y SL+ G    GN  ++L  
Sbjct: 599 PNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSL 658

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            +R+++ G+  +   Y+ L+    +   V  A  LLD+++ KG  P+ V    LL    +
Sbjct: 659 RNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYE 718

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
            G   EA+    D+  +G     +   +
Sbjct: 719 LGDINEALALHDDMARRGLISGTIDITV 746


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 233/505 (46%), Gaps = 37/505 (7%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           KG K DVV    L+   C+  +    I +M  MV  G +P  ++ + LV+ L KKGN+  
Sbjct: 282 KGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDS 341

Query: 152 AMQLVEKMEDYGY-----------------------------------PTNTVTYNSLVR 176
           A  LV K+  +G+                                   P N VTY+ L+ 
Sbjct: 342 AYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILID 401

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             C  G L+ +  +  R+I+ G+    + Y+ L+    K   + AA  L   +I +G +P
Sbjct: 402 SFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEP 461

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
              ++  L++G CK+ + E+A + +R++  K   P+V ++  L+  LC      EA++L 
Sbjct: 462 TATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLF 521

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM      PT VTYN++I         D A ++L++M+     P   +Y P+I+ LCS 
Sbjct: 522 DEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCST 581

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           G+V      +D +  +  K NE  Y+ L    CG G++ EA +    +  +  +     +
Sbjct: 582 GRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCH 641

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +I    ++    + F LL +M   G  PDS  Y+S+I     EG  +++ E   +M  
Sbjct: 642 AVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVT 701

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
               P+V  + A + GLCK    D +  +F+ M+     PN  TY   ++ +  +  ++ 
Sbjct: 702 EKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKE 761

Query: 536 SAEVLKELQLRQVVSESAVERLVMQ 560
           + ++  E+ L+ +++ +A   ++++
Sbjct: 762 ATDLHHEM-LKGLLANTATYNILIR 785



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 214/460 (46%), Gaps = 2/460 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM+  G +  +    +L+   CK   +  A  +   M++ G+ P A+++T L++  CK  
Sbjct: 418 RMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDL 477

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A +L  +M +     +  T+ +L+ GLC    + ++ +  D ++++ + P   TY+
Sbjct: 478 QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYN 537

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            ++E   K   +  A +LL+D++  G  P+  +Y  L++GLC  GR   A  F  DL  K
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
             + N + Y+ LL   C +GR  EA     EM     +  +V + +LI            
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
             +L +M     RP +  Y  +I     EG      +CLD M   +C PN  TY   +  
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNG 717

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC VG++  A  + + +     S     Y   + SL ++G   +A  L +EM K G   +
Sbjct: 718 LCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLAN 776

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           + TY+ LIRG C  G + EA ++   M E    PD   ++ ++   C+S     ++E++ 
Sbjct: 777 TATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWD 836

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            M+ KG  P+   + +L+ G      L+ + E+  ++  R
Sbjct: 837 TMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR 876



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 222/478 (46%), Gaps = 2/478 (0%)

Query: 90  VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           V+ G KPD    + ++  LC+     +A + +  M S+       +Y  L++ LCK G V
Sbjct: 210 VNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGV 269

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             A+++ + + + G   + VTY +LV G C +   +  +  ++ +++ G VP     S L
Sbjct: 270 LEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGL 329

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           ++   K+  + +A  L+  +   G  PNL  YN L+  LCK    ++A   ++++ S   
Sbjct: 330 VDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNL 389

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
             N V+Y+IL+ S C  G  + A      M       TI  YN LI      G    A  
Sbjct: 390 PLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEF 449

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LC 388
           +  +M+     P+A ++  +I+  C + +V+   K   +M  +   P+  T+  L   LC
Sbjct: 450 LYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLC 509

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
              ++ EA  +   +  ++    +  Y  +I   C+     +AF+LL +M   G  PD+Y
Sbjct: 510 STNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTY 569

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY  LI GLC  G +  A +    + + + K +   ++ALL G C   R   +L     M
Sbjct: 570 TYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEM 629

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV-ERLVMQYDFEG 565
           I++G   +   + +L++G   Q +++    +LK++  + +  +S +   ++  Y  EG
Sbjct: 630 IQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEG 687



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 215/483 (44%), Gaps = 16/483 (3%)

Query: 64  RKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM 123
           RK GN          ++ A+  + ++   G  P++     L+  LCK   + KA  + + 
Sbjct: 334 RKKGN----------IDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKN 383

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M S  +  +  +Y+ L++  CK+G +  A     +M + G       YNSL+ G C  G+
Sbjct: 384 MHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGD 443

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L+ +     ++I +GL P A T++ L+    K+  V  A KL  ++  K   P++ ++  
Sbjct: 444 LSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTA 503

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+ GLC      EA + F ++  +  +P  V+YN+++   C     ++A ELL +M    
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG 563

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P   TY  LI  L   G+   A   +D++ K   + +   Y+ ++   C +G++   +
Sbjct: 564 LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVIT 420
               +M  R    N        ++ G  K Q+    F +++ + ++        Y  +I 
Sbjct: 624 SASCEMIQR--GINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMID 681

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +  ++G   ++ + L  M      P+  TY++ + GLC  G I+ A  +F  M   +  P
Sbjct: 682 AYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISP 741

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +   +   L  L K      + ++   M+ KG + N  TY IL+ G      L  + +VL
Sbjct: 742 NSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVL 800

Query: 541 KEL 543
            E+
Sbjct: 801 SEM 803



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 183/434 (42%), Gaps = 56/434 (12%)

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           + Y  NT  ++++V    MLGN               L+P   T S +L    + R    
Sbjct: 156 HSYLQNTRVFDAVVVLRLMLGN--------------TLLPEVRTLSAILNGLLRIRKFIL 201

Query: 222 AMKLLDDIIAKGGKPN-----------------------------------LVSYNVLLT 246
             ++ D+ +  G KP+                                   +V+YNVL+ 
Sbjct: 202 VWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIH 261

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           GLCK G   EA+   + L  KG + +VV+Y  L+   C   ++++   L+ EM      P
Sbjct: 262 GLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVP 321

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           T    + L+  L   G  D A  ++ ++ +  F P+   YN +I  LC    +D      
Sbjct: 322 TEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLY 381

Query: 367 DQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSL 422
             M       N+ TY+ L    C  G +  A   F  +   G ++   P   Y  +I   
Sbjct: 382 KNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP---YNSLINGH 438

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C+ G    A  L  +M   G  P + T+++LI G C +  +E+A +++  M E +  P V
Sbjct: 439 CKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSV 498

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             F AL+ GLC +     + ++F  M+E+   P E TY +++EG      ++ + E+L++
Sbjct: 499 YTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLED 558

Query: 543 LQLRQVVSESAVER 556
           +    +V ++   R
Sbjct: 559 MLHNGLVPDTYTYR 572



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 10/223 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ MV++   P+VV  T  +  LCK  ++ +A  + E M+++ I P++ +Y   ++ L K
Sbjct: 696 LDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +GN+  A  L  +M   G   NT TYN L+RG C LG L ++ + L  + + G+ P+  T
Sbjct: 756 EGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCIT 814

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS ++    +   V AA++L D ++ KG +P+ V++N+L+ G C  G  ++A     D+ 
Sbjct: 815 YSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDML 874

Query: 266 SKGFEPNVV---------SYNILLRSLCMEGRWEEANELLAEM 299
           S+G +P  +           N L+   C+ G  + A  L   M
Sbjct: 875 SRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSM 917



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 158/346 (45%), Gaps = 5/346 (1%)

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           + FL+ +  +   V  A+ +L  ++     P + + + +L GL +  +       F +  
Sbjct: 151 FDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESV 210

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G +P+  + + ++RSLC    +  A E +  M+      +IVTYN+LI  L   G   
Sbjct: 211 NAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVL 270

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL+V   + +   +    +Y  ++   C   + D  +  +++M      P E   +GL 
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE-MTKYG 442
             L   G +  A+ ++  LG +    P  F Y  +I +LC KG+     +LLY+ M    
Sbjct: 331 DGLRKKGNIDSAYDLVVKLG-RFGFLPNLFVYNALINALC-KGEDLDKAELLYKNMHSMN 388

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
              +  TYS LI   C  G+++ A   F  M E   +  +  +N+L+ G CK      + 
Sbjct: 389 LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAE 448

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            ++  MI +G  P  TT+T L+ G     ++E + ++ +E+  +++
Sbjct: 449 FLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEI 494



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 147/352 (41%), Gaps = 20/352 (5%)

Query: 187 SLQFLDRL-IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           +L+F + L + K +     +++ L+ A  + +    A  LL  ++ +G  P  V    L 
Sbjct: 79  ALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFL- 137

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
                   + +  +F           + + ++ L+ S     R  +A  +L  M G    
Sbjct: 138 -------ESHKQCKF----------SSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLL 180

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P + T + ++  L    K     +V DE V    +P   + + +I  LC         + 
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEK 240

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           +  M   R   +  TYN L   LC  G V EA  + +SL  K        Y  ++   CR
Sbjct: 241 ILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCR 300

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
             +      L+ EM + GF P     S L+ GL  +G I+ A ++ V +  + + P++  
Sbjct: 301 VQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFV 360

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           +NAL+  LCK    D +  +++ M       N+ TY+IL++    +  L+++
Sbjct: 361 YNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVA 412



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 1/142 (0%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++  L R  K    +++  E    G  PD YT S++IR LC       A E  + ME   
Sbjct: 189 ILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNR 248

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           +   +  +N L+ GLCK      +LEV + + EKG   +  TY  LV G     + +   
Sbjct: 249 FDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGI 308

Query: 538 EVLKEL-QLRQVVSESAVERLV 558
            ++ E+ +L  V +E+AV  LV
Sbjct: 309 CLMNEMVELGFVPTEAAVSGLV 330



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A   L  M   G  PD +  + ++Y+ C++  +  A+++ + M+  G+ PD+ ++ 
Sbjct: 792 RLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFN 851

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV---------TYNSLVRGLCMLGNLNQSL 188
            L+   C  G +  A +L   M   G     +           N L+ G C+ G ++ +L
Sbjct: 852 LLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTAL 911

Query: 189 QFLDRLIQKGL 199
           +    ++ + +
Sbjct: 912 RLYHSMLTRAV 922


>gi|356561399|ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 422

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 208/427 (48%), Gaps = 36/427 (8%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D+ ++DA  Q  RM+   H P +++   +L    K      AI + + M   GI P+  +
Sbjct: 32  DNVVDDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVT 91

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              L+NC C  G++ ++  ++ K+   GY  NT+T  +L++GLC+   + +SL F D+L+
Sbjct: 92  LNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLV 151

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            +G   N  +   LL    K   +  AMKLL  I  +    N+V YN ++ GLCK+    
Sbjct: 152 AQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVN 211

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA   + ++  +G  PNV++Y+ L+   C+ G+  EA  LL EM   +  P + TYNIL+
Sbjct: 212 EAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILM 271

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            +L   GK+ +AL ++DE+ + R      +Y  ++   C    +D  +    +M  RR +
Sbjct: 272 DALCKEGKS-YALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQ 330

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           PN  T++ L      G+++ A               QEF+++++                
Sbjct: 331 PNVYTHSXLTGCVKGGRLKNA---------------QEFFQHLLVK-------------- 361

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
                 G+  D +TY+ +I GLC EG+++EAL +   ME+    P+   F  ++  L + 
Sbjct: 362 ------GYCIDVWTYTVMISGLCKEGMLDEALAMKXKMEDNGCIPNAVTFEIIICSLFEK 415

Query: 496 RRTDLSL 502
              D +L
Sbjct: 416 DENDKAL 422



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 167/383 (43%), Gaps = 40/383 (10%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A+ L ++ME  G   N VT N L+   C LG++                  AF++S    
Sbjct: 73  AISLSKQMEVKGIEPNLVTLNILINCFCHLGHM------------------AFSFS---- 110

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
                        +L  I+  G +PN ++   L+ GLC +    +++ F   L ++GF+ 
Sbjct: 111 -------------VLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGFQI 157

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           N VS   LL  LC  G    A +LL  ++       +V YN +I  L      + A  + 
Sbjct: 158 NHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYDLY 217

Query: 332 DEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCG 389
            EM V+G F P+  +Y+ +I   C  G++      L +M  +   P+  TYN L   LC 
Sbjct: 218 SEMDVRGNF-PNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDALCK 276

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            GK   A  +I  +  ++  +    Y  ++   C+     +A  L  +M +    P+ YT
Sbjct: 277 EGK-SYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQPNVYT 335

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           +S L  G    G ++ A E F  +    Y  DV  +  ++ GLCK    D +L +   M 
Sbjct: 336 HSXL-TGCVKGGRLKNAQEFFQHLLVKGYCIDVWTYTVMISGLCKEGMLDEALAMKXKME 394

Query: 510 EKGQMPNETTYTILVEGIAHQDE 532
           + G +PN  T+ I++  +  +DE
Sbjct: 395 DNGCIPNAVTFEIIICSLFEKDE 417



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 115/213 (53%), Gaps = 2/213 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +N+A+     M  +G+ P+V+    L+   C A ++ +A  +++ M+   I 
Sbjct: 202 DGLCKDKLVNEAYDLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNID 261

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L++ LCK+G   YA+ L++++     P + VTY SL+ G C    L++++  
Sbjct: 262 PDVYTYNILMDALCKEGK-SYALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIAL 320

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++ ++ + PN +T+S  L    K   +  A +    ++ KG   ++ +Y V+++GLCK
Sbjct: 321 FKKMKERRIQPNVYTHS-XLTGCVKGGRLKNAQEFFQHLLVKGYCIDVWTYTVMISGLCK 379

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           EG  +EA+     +   G  PN V++ I++ SL
Sbjct: 380 EGMLDEALAMKXKMEDNGCIPNAVTFEIIICSL 412



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 141/296 (47%), Gaps = 2/296 (0%)

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A+  F  +      P ++ +N +L S      +  A  L  +M+     P +VT NI
Sbjct: 35  VDDAVSQFNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNI 94

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI    + G    +  VL +++K  ++P+  +   +I  LC + +V   +   D++  + 
Sbjct: 95  LINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQG 154

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            + N  +   L   LC +G+++ A  +++ + ++   +    Y  +I  LC+     +A+
Sbjct: 155 FQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAY 214

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L  EM   G  P+  TY +LI G C+ G + EA  +   M   +  PDV  +N L+  L
Sbjct: 215 DLYSEMDVRGNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDAL 274

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           CK  ++  +L++   +  + Q  +  TYT L++G      L+ +  + K+++ R++
Sbjct: 275 CKEGKS-YALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRI 329



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 25/120 (20%), Positives = 51/120 (42%)

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A  L  +M   G  P+  T + LI   C  G +  +  +   + +  Y+P+      L+ 
Sbjct: 73  AISLSKQMEVKGIEPNLVTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIK 132

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           GLC       SL     ++ +G   N  +   L+ G+    E+  + ++L+ ++ R  ++
Sbjct: 133 GLCLKDEVRKSLHFHDKLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTIT 192


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 209/422 (49%), Gaps = 2/422 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+N+A+  L+RM  +G  PDVV  T L+  LC A K+  A +V   M +    PD  
Sbjct: 272 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRV 331

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++      ++    Q   +ME  G+  + VT+  LV  LC  GN  ++   LD +
Sbjct: 332 TYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVM 391

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G++PN  TY+ L+    +   +  A+++ D++ + G KP   +Y V +    K G +
Sbjct: 392 RDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDS 451

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+  F  + +KG  PN+V+ N  L SL   GR  EA ++   +      P  VTYN++
Sbjct: 452 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 511

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+ D A+K+L EMV+    P     N +I  L    +VD   K   +M   + 
Sbjct: 512 MKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 571

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KP   TYN  LA L   GK+QEA  + + +  K        +  +   LC+  +   A +
Sbjct: 572 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 631

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L++M   G  PD +TY+++I GL   G ++EA+  F  M++  Y PD      LL G+ 
Sbjct: 632 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVV 690

Query: 494 KS 495
           K+
Sbjct: 691 KA 692



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 237/561 (42%), Gaps = 112/561 (19%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            +T ++  ++++A+    RM     KP VV    LL  L K  K+++AI++ E MV  G  
Sbjct: 548  NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 607

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  ++  L +CLCK   V  A++++ KM D G   +  TYN+++ GL   G + +++ F
Sbjct: 608  PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 667

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK--------------------LLDDII 230
              ++ +K + P+  T   LL    K   +  A K                    L+  I+
Sbjct: 668  FHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSIL 726

Query: 231  AKGGKPNLVSYN--VLLTGLCKEGRT---------------------------------- 254
            A+ G  N VS++  ++  G+C++G +                                  
Sbjct: 727  AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPK 786

Query: 255  -----------------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
                             E A   F  + + G  P+V +YN LL +    G+ +E  E+  
Sbjct: 787  LPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYK 846

Query: 298  EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSE 356
            EM   +  P  +T+NI+I  L   G  D AL +  +++  R F P+A +Y P+I  L   
Sbjct: 847  EMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 906

Query: 357  GKVDLVVKCLDQMFHRRCKPNEGTYNGLA------------------------------- 385
            G++    +  + M    C+PN   YN L                                
Sbjct: 907  GRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 966

Query: 386  -----MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
                  LC VG+V E     + L     +     Y  +I  L +  +  +A  L  EM K
Sbjct: 967  SVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKK 1026

Query: 441  -YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
              G TPD YTY+SLI  L + G++EEA +I+  ++    +P+V  FNAL+ G   S + +
Sbjct: 1027 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1086

Query: 500  LSLEVFQMMIEKGQMPNETTY 520
             +  V+Q M+  G  PN  TY
Sbjct: 1087 HAYAVYQTMVTGGFSPNTGTY 1107



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 218/463 (47%), Gaps = 1/463 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  A   L +M   G   +      L++ L K+    +A++V   M+  G  P   +Y+ 
Sbjct: 171 LRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSS 230

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L K+ ++   M L+++ME  G   N  T+   +R L   G +N++ + L R+  +G
Sbjct: 231 LMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 290

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY+ L++A    R +  A ++   +     KP+ V+Y  LL         +   
Sbjct: 291 CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVN 350

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +F+ ++   G  P+VV++ IL+ +LC  G + EA   L  M      P + TYN LI  L
Sbjct: 351 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGL 410

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + D AL++ D M     +P+A +Y   I      G     ++  ++M  +   PN 
Sbjct: 411 LRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 470

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
              N  L  L   G+ +EA  I   L +         Y  ++    + G+  +A +LL E
Sbjct: 471 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 530

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M +    PD    +SLI  L     ++EA ++F+ M+E   KP V  +N LL GL K+ +
Sbjct: 531 MVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 590

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
              ++E+F+ M++KG  PN  T+  L + +   DE+ L+ ++L
Sbjct: 591 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 633



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 197/419 (47%), Gaps = 1/419 (0%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           +S ++    +  Y++  L   G +     + + M+      +T TY ++ + L + G L 
Sbjct: 113 NSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLR 172

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           Q+   L ++ + G V NA++Y+ L+    K R    AM++   +I  G +P+L +Y+ L+
Sbjct: 173 QAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLM 232

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            GL K    E  +   +++ + G +PNV ++ I +R L   G+  EA E+L  MD     
Sbjct: 233 VGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCG 292

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P +VTY +LI +L    K D A +V  +M  GR +P   +Y  ++ R      +D V + 
Sbjct: 293 PDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQF 352

Query: 366 LDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
             +M      P+  T+  L   LC  G   EAFA +  + ++        Y  +I  L R
Sbjct: 353 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLR 412

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
             +   A ++   M   G  P +YTY   I      G    ALE F  M+     P++  
Sbjct: 413 VHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 472

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            NA L  L K+ R   + ++F  + + G +P+  TY ++++  +   E++ + ++L E+
Sbjct: 473 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 531



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 178/382 (46%), Gaps = 9/382 (2%)

Query: 114  MKKAIKVMEMMVSSGIIPDASSYTY-LVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTY 171
            +  A+   E +V++GI  D  S    ++    K  N   A  L EK  +D G      TY
Sbjct: 731  IDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTY 790

Query: 172  NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
            N L+ GL     +  +     ++   G +P+  TY+FLL+A  K   +    ++  ++ A
Sbjct: 791  NLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSA 850

Query: 232  KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWE 290
               +PN +++N++++GL K G  ++A+  + DL S + F P   +Y  L+  L   GR  
Sbjct: 851  HECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 910

Query: 291  EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            EA +L   M      P    YNILI      G+ D A  +   MVK   RP   +Y+ ++
Sbjct: 911  EAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 970

Query: 351  ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQ 407
              LC  G+VD  +    ++      P+   YN   ++ G+GK   ++EA  +   +   +
Sbjct: 971  DCLCMVGRVDEGLHYFRELKESGLNPDVVCYN--LIINGLGKFHRLEEALVLFNEMKKSR 1028

Query: 408  NSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
              +P  + Y  +I +L   G   +A ++  E+ + G  P+ +T+++LIRG  + G  E A
Sbjct: 1029 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1088

Query: 467  LEIFVVMEEYDYKPDVDNFNAL 488
              ++  M    + P+   +  L
Sbjct: 1089 YAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 5/306 (1%)

Query: 81   DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
            D FLQ++   + G  PDV     LL    K+ K+ +  ++ + M +    P+  ++  ++
Sbjct: 808  DVFLQVK---NTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVI 864

Query: 141  NCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
            + L K GNV  A+ L  + M D  +     TY  L+ GL   G L ++ Q  + +   G 
Sbjct: 865  SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGC 924

Query: 200  VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
             PN   Y+ L+    K     AA  L   ++ +G +P+L +Y+VL+  LC  GR +E + 
Sbjct: 925  RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 984

Query: 260  FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIVTYNILIGSL 318
            +FR+L   G  P+VV YN+++  L    R EEA  L  EM      +P + TYN LI +L
Sbjct: 985  YFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNL 1044

Query: 319  AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               G  + A K+ +E+ +    P+  ++N +I      GK +        M      PN 
Sbjct: 1045 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1104

Query: 379  GTYNGL 384
            GTY  L
Sbjct: 1105 GTYEQL 1110



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 1/178 (0%)

Query: 368 QMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL-GNKQNSSPQEFYKYVITSLCRKG 426
            M  +  KP+  +     +L        +F+  +S+ GN       E   Y++ +L   G
Sbjct: 75  SMIRKSSKPDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDG 134

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           K  +   +   M K     D+ TY ++ + L ++G + +A      M E+ +  +  ++N
Sbjct: 135 KIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYN 194

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            L+  L KSR    ++EV++ MI  G  P+  TY+ L+ G+  + ++E    +LKE++
Sbjct: 195 GLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEME 252


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 212/432 (49%), Gaps = 9/432 (2%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+  L KA  M +A  + +   ++G   D  +YT +VN L K   +  A+ L+EK+   G
Sbjct: 230 LINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG 289

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
                 TYN+L+ GLC +G L +++  L +++  G  P+  TY+ L++   KE+    A 
Sbjct: 290 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 349

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           KL  ++ ++G   + V Y  L+ GL + G+  +A   ++ + S G  P+VV+ + ++  L
Sbjct: 350 KLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 409

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
              GR   A  +   M+    +P  V Y+ LI  L    K D AL++L +M K    P  
Sbjct: 410 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 469

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQS 402
            +YN +I  LC  G V+      D+M    CKP+  TYN L + LC  G    A  ++  
Sbjct: 470 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDD 529

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +     SS +  Y  ++  LC+ GK      L +EM + G   +S T + LI  LC    
Sbjct: 530 M-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANR 583

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++EA+ +F  + + +  P    +N+++  L KS + +    V+Q M  +   P+  TY  
Sbjct: 584 VDEAVSLFNAIRK-EGMPHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNA 641

Query: 523 LVEGIAHQDELE 534
           L+ G+   + ++
Sbjct: 642 LLNGMIGANRMD 653



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 207/419 (49%), Gaps = 17/419 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +A   +E++ + G  P +     LL  LCK  ++++AI ++  +V +G  PD  
Sbjct: 271 KNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV 330

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++ L K+     A +L ++M   G   +TV Y +L+RGL   G + Q+      +
Sbjct: 331 TYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G VP+  T S +++   K   + AA+++   + A+G  PN V Y+ L+ GLCK  + 
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 450

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+     +      P+ ++YNIL+  LC  G  E A     EM      P + TYNIL
Sbjct: 451 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 510

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH--- 371
           I  L   G TD A  VLD+M   RF      Y+ ++  LC  GK++    C+  +FH   
Sbjct: 511 ISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLE--GGCM--LFHEME 561

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTY 429
           R    N  T   L   LC   +V EA ++  ++  ++   P  + Y  +I++L + GK  
Sbjct: 562 RSGVANSQTRTRLIFHLCKANRVDEAVSLFNAI--RKEGMPHPYAYNSIISALIKSGKVN 619

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
           +   +  EMT++ + PD  TY++L+ G+     ++ A   ++ M    Y P V   + L
Sbjct: 620 EGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKL 677



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 208/430 (48%), Gaps = 9/430 (2%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +   + G   D+   T ++  L K  K+++A+ +ME + ++G  P  ++Y  L+N LCK 
Sbjct: 248 QETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKM 307

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A+ L+ K+ D G   + VTY SL+ GL       ++ +    +  +GL  +   Y
Sbjct: 308 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCY 367

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L+    +   +  A  +   + + G  P++V+ + ++ GL K GR   A+R F+ + +
Sbjct: 368 TALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 427

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  PN V Y+ L+  LC   + + A E+LA+M     +P  +TYNILI  L   G  + 
Sbjct: 428 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 487

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A    DEM++   +P   +YN +I+ LC  G  D     LD M   R       Y+ L  
Sbjct: 488 ARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVD 542

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  GK++    +   +     ++ Q   + +I  LC+  +  +A  L   + K G  P
Sbjct: 543 GLCKSGKLEGGCMLFHEMERSGVANSQTRTR-LIFHLCKANRVDEAVSLFNAIRKEGM-P 600

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
             Y Y+S+I  L   G + E   ++  M  + +KPD   +NALL G+  + R D +   +
Sbjct: 601 HPYAYNSIISALIKSGKVNEGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRAHYYY 659

Query: 506 QMMIEKGQMP 515
             M  +G +P
Sbjct: 660 LEMTGRGYVP 669



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 212/452 (46%), Gaps = 9/452 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P +     +L+ LCK+ K+  A+   E +  S  +  A++++ L+N L K G +  A
Sbjct: 185 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPV-SAATFSILINGLVKAGMMIQA 243

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             L ++    G   +  TY ++V  L     + +++  ++++   G  P   TY+ LL  
Sbjct: 244 HSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNG 303

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K   +  A+ LL  I+  G  P++V+Y  L+ GL KE R+ EA + F+++ S+G   +
Sbjct: 304 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALD 363

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            V Y  L+R L   G+  +A+ +   M      P +VT + +I  L+  G+   A+++  
Sbjct: 364 TVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 423

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
            M      P+   Y+ +I  LC   K+D  ++ L QM    C P+  TYN L   LC  G
Sbjct: 424 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 483

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            V+ A A    +           Y  +I+ LC+ G T  A  +L +M+   F      YS
Sbjct: 484 DVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYS 538

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SL+ GLC  G +E    +F  ME      +      L+  LCK+ R D ++ +F  + ++
Sbjct: 539 SLVDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 597

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           G MP+   Y  ++  +    ++     V +E+
Sbjct: 598 G-MPHPYAYNSIISALIKSGKVNEGQAVYQEM 628



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 214/466 (45%), Gaps = 11/466 (2%)

Query: 99  VQATNLLYDL-CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN--CLCKKGNVGYAMQL 155
           V   N L D+  +  + ++A  +++  +++   PD  ++  L+   CL ++    +A+ +
Sbjct: 119 VHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAV-I 177

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            E  ED+G   +  T+N ++ GLC  G +  ++   +  +++ +  +A T+S L+    K
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE-AVRRSMPVSAATFSILINGLVK 236

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  A  L  +    G   ++ +Y  ++  L K  + +EA+     + + G  P + +
Sbjct: 237 AGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIAT 296

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN LL  LC  GR EEA +LL ++     +P +VTY  LI  L    ++  A K+  EM 
Sbjct: 297 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 356

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
                     Y  +I  L   GK+         M    C P+  T + +   L   G++ 
Sbjct: 357 SRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 416

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            A  I +S+  +  +  +  Y  +I  LC+  K   A ++L +M K   TPD+ TY+ LI
Sbjct: 417 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 476

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC  G +E A   F  M E   KPDV  +N L+ GLCK+  TD +  V   M      
Sbjct: 477 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----S 531

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            +   Y+ LV+G+    +LE    +  E++   V +     RL+  
Sbjct: 532 SSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFH 577



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 174/354 (49%), Gaps = 13/354 (3%)

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +  T + LL+   + +    A  LL + +A   +P++ ++NVL+TG C     EEA
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 258 IRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD---RSPTI--VTY 311
               R++    G  P++ ++N++L  LC  G+      +LA MD  +   RS  +   T+
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGK------VLAAMDHFEAVRRSMPVSAATF 227

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           +ILI  L   G    A  +  E           +Y  I+  L    K+   V  ++++  
Sbjct: 228 SILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITA 287

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             C P   TYN L   LC +G+++EA  +++ + +   +     Y  +I  L ++ ++++
Sbjct: 288 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 347

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A++L  EM   G   D+  Y++LIRGL   G I +A  ++  M  +   PDV   + ++ 
Sbjct: 348 AYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 407

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           GL K+ R   ++ +F+ M  +G  PNE  Y+ L+ G+    +++ + E+L +++
Sbjct: 408 GLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 461



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 180/398 (45%), Gaps = 3/398 (0%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           T+N L+ G C+     ++   +  + +  G+ P+  T++ +L    K   V AAM   + 
Sbjct: 156 TWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE- 214

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
            + +    +  ++++L+ GL K G   +A    ++  + G   ++ +Y  ++  L    +
Sbjct: 215 AVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKK 274

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            +EA  L+ ++     +PTI TYN L+  L   G+ + A+ +L ++V     P   +Y  
Sbjct: 275 IQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 334

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I  L  E +     K   +M  R    +   Y  L   L   GK+ +A ++ +++ +  
Sbjct: 335 LIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHG 394

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                     +I  L + G+   A ++   M   G  P+   YS+LI GLC    ++ AL
Sbjct: 395 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 454

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           E+   M++    PD   +N L+ GLCKS   + +   F  M+E G  P+  TY IL+ G+
Sbjct: 455 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGL 514

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
                 + +  VL ++   + V  S V+ L      EG
Sbjct: 515 CKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEG 552


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 215/460 (46%), Gaps = 54/460 (11%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD      L+  LCK  ++ +A+ +++ M S G  P    Y  L++ LCKKG++    +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           V+ M   G   N VTYN+L+ GLC+ G L++++  L+R++    +PN  TY  L+    K
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +R    A++LL  +  +G   N   Y+VL++GL KEG+ EEA+  +R +  KG +PN+V 
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y++L+  LC EG+  EA E+L  M      P   TY+ L+      G  + A++V  EM 
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           K     +   Y+ +I  LC  G+V   +    +M     KP+   Y+ +   LCG+G + 
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            A  +   +                  LC++    Q              PD  TY+ L+
Sbjct: 520 AALKLYHEM------------------LCQEEPKSQ--------------PDVVTYNILL 547

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA---------------------LLLGLC 493
            GLCM+  I  A+++   M +    PDV   N                      L++ L 
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLL 607

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           K +R   +  + ++M+ K   P  +T+ ++V  I    ++
Sbjct: 608 KRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 256/543 (47%), Gaps = 35/543 (6%)

Query: 10  TLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNN 69
            + NP   P  +    +   P + SF L    +  +  +       DSV    +R    N
Sbjct: 50  VVENPLEAPISEK--MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLEN 107

Query: 70  NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK----VMEMMV 125
                R      +F+ + R   K H PD  +A +L + +    + K+++K    V+ +++
Sbjct: 108 RVIIER------SFIVVFRAYGKAHLPD--KAVDLFHRMVDEFRCKRSVKSFNSVLNVII 159

Query: 126 SSGIIPDA-SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
           + G+       Y Y+VN      N+   +             N +++N +++ LC L  +
Sbjct: 160 NEGLYHRGLEFYDYVVN-----SNMNMNIS-----------PNGLSFNLVIKALCKLRFV 203

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           +++++    + ++  +P+ +TY  L++   KE  +  A+ LLD++ ++G  P+ V YNVL
Sbjct: 204 DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + GLCK+G      +   ++  KG  PN V+YN L+  LC++G+ ++A  LL  M     
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            P  VTY  LI  L    +   A+++L  M +  +  +   Y+ +I+ L  EGK +  + 
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383

Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
              +M  + CKPN   Y+ L   LC  GK  EA  I+  +           Y  ++    
Sbjct: 384 LWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + G   +A Q+  EM K G + + + YS LI GLC  G ++EA+ ++  M     KPD  
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMI---EKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            +++++ GLC     D +L+++  M+   E    P+  TY IL++G+  Q ++  + ++L
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563

Query: 541 KEL 543
             +
Sbjct: 564 NSM 566



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 198/423 (46%), Gaps = 25/423 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ ++++A L L+ M S+G  P  V    L+  LCK   + +  K+++ M   G +
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++ LC KG +  A+ L+E+M       N VTY +L+ GL        +++ 
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + ++G   N   YS L+   +KE     AM L   +  KG KPN+V Y+VL+ GLC+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG+  EA      + + G  PN  +Y+ L++     G  EEA ++  EMD    S     
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y++LI  L   G+   A+ V  +M+    +P   +Y+ II  LC  G +D  +K   +M 
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529

Query: 371 HR---RCKPNEGTYN----GLAMLCGVGKVQEAF----------------AIIQSLGNKQ 407
            +   + +P+  TYN    GL M   + +  +                    + +L  K 
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589

Query: 408 NSSPQ--EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           NS  +   F + ++  L ++ +   A  ++  M      P + T++ ++R +C    I  
Sbjct: 590 NSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINA 649

Query: 466 ALE 468
           A++
Sbjct: 650 AID 652



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 135/298 (45%), Gaps = 13/298 (4%)

Query: 259 RFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           + F+  P  G F+    + + ++ S    G ++   +LL+ +   +R   I+  + ++  
Sbjct: 62  KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENR--VIIERSFIVVF 119

Query: 318 LAYHGKT---DHALKVLDEMV-KGRFRPSAASYNPIIARLCSEG----KVDLVVKCLDQM 369
            AY GK    D A+ +   MV + R + S  S+N ++  + +EG     ++     ++  
Sbjct: 120 RAY-GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN 178

Query: 370 FHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
            +    PN  ++N  +  LC +  V  A  + + +  ++       Y  ++  LC++ + 
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A  LL EM   G +P    Y+ LI GLC +G +    ++   M      P+   +N L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           + GLC   + D ++ + + M+    +PN+ TY  L+ G+  Q     +  +L  ++ R
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 41/246 (16%)

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T + +I S A  G  D   K+L  +   R           I    + GK  L  K +D +
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRI---RLENRVIIERSFIVVFRAYGKAHLPDKAVD-L 134

Query: 370 FHR-----RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
           FHR     RCK +  ++N  L ++   G                     EFY YV+ S  
Sbjct: 135 FHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGL---------------EFYDYVVNS-- 177

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
                               +P+  +++ +I+ LC    ++ A+E+F  M E    PD  
Sbjct: 178 --------------NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +  L+ GLCK  R D ++ +   M  +G  P+   Y +L++G+  + +L    +++  +
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283

Query: 544 QLRQVV 549
            L+  V
Sbjct: 284 FLKGCV 289


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 189/385 (49%), Gaps = 3/385 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R ++L  A      M SKG  PDVV  T ++  LC A +  +A KV   ++  G+ PD  
Sbjct: 131 RQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYK 190

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   LV  LC  G V  A +LV  +   G   N++ YN+L+ G C +G ++++++    +
Sbjct: 191 ACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFM 250

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G VP+  TY+ LL    +E  V  A++L++ +   G +P+L SYN LL G CK    
Sbjct: 251 SRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMV 310

Query: 255 EEA-IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           + A +     + +KG   +VVSYN ++ + C   R  +  EL  EM G    P +VT+NI
Sbjct: 311 DRAHLMMVERMQTKGM-CDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI +    G T    K+LDEM K R  P    Y  ++  LC  GKVD+       M    
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P+  +YN L    C   +V +A  +   + +K     +  YK ++  L R  K   A 
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGL 457
           ++  +M + GFT + +   +L+  +
Sbjct: 490 RVWDQMMERGFTLNRHLSETLVNAI 514



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 201/443 (45%), Gaps = 34/443 (7%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M S G  PD+      L  LC+ N+++ A+++   M S G  PD  SYT +++ LC    
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKR 169

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A ++  ++ D G   +     +LV GLC  G ++ + + +  +I+ G+  N+  Y+ 
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++   +   V  AMK+   +   G  P+LV+YN+LL   C+EG  +EA+R    +   G
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            EP++ SYN LL+  C     + A+ ++ E         +V+YN +I +     +T    
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGY 349

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
           ++ +EM     RP   ++N +I     EG   +V K LD+M   R  P+          C
Sbjct: 350 ELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPD----------C 399

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                                    FY  V+  LC+ GK   A  +  +M + G  PD  
Sbjct: 400 ------------------------IFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVI 435

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           +Y++L+ G C    + +A+ +F  M+     PD   +  ++ GL + ++  L+  V+  M
Sbjct: 436 SYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQM 495

Query: 509 IEKGQMPNETTYTILVEGIAHQD 531
           +E+G   N      LV  I   D
Sbjct: 496 MERGFTLNRHLSETLVNAIQSSD 518



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 194/416 (46%), Gaps = 4/416 (0%)

Query: 135 SYTYLVNCLCKKGN---VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +Y+  ++ LC   N   +     L+  M+  G+  +   +N+ +  LC    L  +L+  
Sbjct: 83  TYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELF 142

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             +  KG  P+  +Y+ +++A    +    A K+   +I KG  P+  +   L+ GLC  
Sbjct: 143 HSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSG 202

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR + A      +   G + N + YN L+   C  GR ++A ++ A M      P +VTY
Sbjct: 203 GRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTY 262

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NIL+      G  D A+++++ M +    P   SYN ++   C    VD     + +   
Sbjct: 263 NILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQ 322

Query: 372 RRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            +   +  +YN  +   C   + ++ + + + +  K        +  +I +  R+G T+ 
Sbjct: 323 TKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHV 382

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
             +LL EMTK    PD   Y++++  LC  G ++ A  +F  M E    PDV ++NALL 
Sbjct: 383 VKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLN 442

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           G CK+ R   ++ +F  M  KG  P+E TY ++V G+    ++ L+  V  ++  R
Sbjct: 443 GFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMER 498



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 177/389 (45%), Gaps = 7/389 (1%)

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD- 227
           + Y S +  L   G +NQ++   D++ +      +  Y+  +    +   +H A      
Sbjct: 11  LAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRR 70

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEE---AIRFFRDLPSKGFEPNVVSYNILLRSLC 284
            +I +G      +Y+  ++ LC                D+ S GF P++ ++N  L  LC
Sbjct: 71  HVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLC 130

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
            + R E A EL   M    R P +V+Y I+I +L    + D A KV   ++     P   
Sbjct: 131 RQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYK 190

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL 403
           +   ++  LCS G+VDL  + +  +     K N   YN L    C +G+V +A  I ++ 
Sbjct: 191 ACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKI-KAF 249

Query: 404 GNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
            ++    P    Y  ++   C +G   +A +L+  M + G  PD Y+Y+ L++G C   +
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++ A  + V   +     DV ++N ++   CK+RRT    E+F+ M  KG  P+  T+ I
Sbjct: 310 VDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSE 551
           L++    +    +  ++L E+   +V+ +
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPD 398



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 10/150 (6%)

Query: 79  LNDAFLQ----------LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG 128
           L DAFL+          L+ M      PD +  T ++  LCK  K+  A  V   MV +G
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + PD  SY  L+N  CK   V  AM L ++M+  G   + VTY  +V GL     ++ + 
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           +  D+++++G   N      L+ A     G
Sbjct: 490 RVWDQMMERGFTLNRHLSETLVNAIQSSDG 519


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 227/471 (48%), Gaps = 14/471 (2%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P       LL+   K  K     +  + M+ +G  P   +Y  +++C+CK+G+V  A  L
Sbjct: 93  PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 152

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            E+M+  G   +TVTYNS++ G   +G L+ ++ F + +      P+  TY+ L+    K
Sbjct: 153 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 212

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +   ++   ++   G KPN+VSY+ L+   CKEG  ++AI+F+ D+   G  PN  +
Sbjct: 213 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 272

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+ + C  G   +A  L  EM        +VTY  LI  L    +   A ++  +M 
Sbjct: 273 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 332

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
                P+ ASYN +I        +D  ++ L+++  R  KP+   Y      LC + K++
Sbjct: 333 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 392

Query: 395 EAFAIIQSL---GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            A  ++  +   G K NS     Y  ++ +  + G   +   LL EM +        T+ 
Sbjct: 393 AAKVVMNEMKECGIKANSL---IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC 449

Query: 452 SLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            LI GLC   L+ +A++ F  +  ++  + +   F A++ GLCK  + + +  +F+ M++
Sbjct: 450 VLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 509

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           KG +P+ T YT L++G   Q        VL+ L LR  ++E  ++  ++ Y
Sbjct: 510 KGLVPDRTAYTSLMDGNFKQ------GNVLEALALRDKMAEIGMKLDLLAY 554



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 214/493 (43%), Gaps = 48/493 (9%)

Query: 70  NDTRHRDHKL---NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS 126
           N   HR  KL   +D     + M+  G +P V     ++  +CK   ++ A  + E M  
Sbjct: 99  NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
            G++PD  +Y  +++   K G +   +   E+M+D     + +TYN+L+   C  G L  
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
            L+F   +   GL PN  +YS L++A  KE  +  A+K   D+   G  PN  +Y  L+ 
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 278

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
             CK G   +A R   ++   G E NVV+Y  L+  LC   R +EA EL  +MD     P
Sbjct: 279 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 338

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKC 365
            + +YN LI         D AL++L+E+ KGR  +P    Y   I  LCS  K++     
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 397

Query: 366 LDQM------------------FHRRCKPNEGTY---------------------NGLAM 386
           +++M                  + +   P EG +                     +GL  
Sbjct: 398 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 457

Query: 387 LCGVGKVQEAF-AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
              V K  + F  I    G + N++    +  +I  LC+  +   A  L  +M + G  P
Sbjct: 458 NKLVSKAVDYFNRISNDFGLQANAA---IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 514

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D   Y+SL+ G   +G + EAL +   M E   K D+  + +L+ GL    +   +    
Sbjct: 515 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFL 574

Query: 506 QMMIEKGQMPNET 518
           + MI +G  P+E 
Sbjct: 575 EEMIGEGIHPDEV 587



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 179/385 (46%), Gaps = 6/385 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G KP+VV  + L+   CK   M++AIK    M   G++P+  +YT L++  CK GN
Sbjct: 226 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 285

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A +L  +M   G   N VTY +L+ GLC    + ++ +   ++   G++PN  +Y+ 
Sbjct: 286 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 345

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K + +  A++LL+++  +G KP+L+ Y   + GLC   + E A     ++   G
Sbjct: 346 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 405

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + N + Y  L+ +    G   E   LL EM   D   T+VT+ +LI  L  +     A+
Sbjct: 406 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 465

Query: 329 KVLDEMVKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
              + +      + +AA +  +I  LC + +V+      +QM  +   P+   Y  L  +
Sbjct: 466 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL--M 523

Query: 388 CG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
            G    G V EA A+   +           Y  ++  L    +  +A   L EM   G  
Sbjct: 524 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 583

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEI 469
           PD     S+++     G I+EA+E+
Sbjct: 584 PDEVLCISVLKKHYELGCIDEAVEL 608



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 202/475 (42%), Gaps = 43/475 (9%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P    +  L + L   G +  A+Q   KM+ +     T + N L+     LG  +   +
Sbjct: 57  VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 116

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           F   +I  G  P  FTY+ +++   KE  V AA  L +++  +G  P+ V+YN ++ G  
Sbjct: 117 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 176

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K GR ++ + FF ++     EP+V++YN L+   C  G+     E   EM G    P +V
Sbjct: 177 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 236

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +Y+ L+ +    G    A+K   +M +    P+  +Y  +I   C  G +    +  ++M
Sbjct: 237 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
                + N  TY  L   LC   +++EA   F  + + G   N +    Y  +I    + 
Sbjct: 297 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS---YNALIHGFVKA 353

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE--------------------- 464
               +A +LL E+   G  PD   Y + I GLC    IE                     
Sbjct: 354 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 413

Query: 465 --------------EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
                         E L +   M+E D +  V  F  L+ GLCK++    +++ F  +  
Sbjct: 414 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 473

Query: 511 K-GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
             G   N   +T +++G+   +++E +  + +++  + +V +      +M  +F+
Sbjct: 474 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 528



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 145/332 (43%), Gaps = 49/332 (14%)

Query: 49  QVTISPKDSVYTK---PNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLL 105
           +V + P +  YT     N K GN          L+DAF     M+  G + +VV  T L+
Sbjct: 263 RVGLVPNEYTYTSLIDANCKIGN----------LSDAFRLGNEMLQVGVEWNVVTYTALI 312

Query: 106 YDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYP 165
             LC A +MK+A ++   M ++G+IP+ +SY  L++   K  N+  A++L+ +++  G  
Sbjct: 313 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 372

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            + + Y + + GLC L  +  +   ++ + + G+  N+  Y+ L++A +K       + L
Sbjct: 373 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 432

Query: 226 LDD------------------------IIAK------------GGKPNLVSYNVLLTGLC 249
           LD+                        +++K            G + N   +  ++ GLC
Sbjct: 433 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 492

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K+ + E A   F  +  KG  P+  +Y  L+     +G   EA  L  +M        ++
Sbjct: 493 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 552

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            Y  L+  L++  +   A   L+EM+     P
Sbjct: 553 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 584



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 36/253 (14%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++ A   L  +  +G KPD++     ++ LC   K++ A  VM  M   GI  ++  YT 
Sbjct: 356 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 415

Query: 139 LVNCLCKKGNVGYAMQLVEKME------------------------------------DY 162
           L++   K GN    + L+++M+                                    D+
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 475

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   N   + +++ GLC    +  +    ++++QKGLVP+   Y+ L++  +K+  V  A
Sbjct: 476 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 535

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           + L D +   G K +L++Y  L+ GL    + ++A  F  ++  +G  P+ V    +L+ 
Sbjct: 536 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 595

Query: 283 LCMEGRWEEANEL 295
               G  +EA EL
Sbjct: 596 HYELGCIDEAVEL 608



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 139/371 (37%), Gaps = 86/371 (23%)

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-------DGGDR--------SPTI 308
           +   GF+ +V SY I+   L     + +AN +L EM       D  D          P  
Sbjct: 1   MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 60

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRF----------------------------- 339
             ++ L   L   G  + A++   +M + R                              
Sbjct: 61  GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120

Query: 340 ------RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGK 392
                 RP+  +YN +I  +C EG V+      ++M  R   P+  TYN +    G VG+
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + +     + + +         Y  +I   C+ GK     +   EM   G  P+  +YS+
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240

Query: 453 LIRGLCMEGLIEEALEIFVVME-------EYDYKPDVD---------------------- 483
           L+   C EG++++A++ +V M        EY Y   +D                      
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300

Query: 484 ------NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
                  + AL+ GLC + R   + E+F  M   G +PN  +Y  L+ G      ++ + 
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360

Query: 538 EVLKELQLRQV 548
           E+L EL+ R +
Sbjct: 361 ELLNELKGRGI 371



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 1/121 (0%)

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           F +L+  T+    P    + +L   L   G++EEA++ F  M+ +   P   + N LL  
Sbjct: 46  FDVLWS-TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 104

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
             K  +TD     F+ MI  G  P   TY I+++ +  + ++E +  + +E++ R +V +
Sbjct: 105 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 164

Query: 552 S 552
           +
Sbjct: 165 T 165



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 35/151 (23%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D+++  A    E+MV KG                                   ++PD +
Sbjct: 493 KDNQVEAATTLFEQMVQKG-----------------------------------LVPDRT 517

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++   K+GNV  A+ L +KM + G   + + Y SLV GL     L ++  FL+ +
Sbjct: 518 AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           I +G+ P+      +L+  Y+   +  A++L
Sbjct: 578 IGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 241/498 (48%), Gaps = 49/498 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++  + +AF+   RMV +G   DVV  T L+  L KA     A  + ++++   ++
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++  CK G+V     L+++ME+     N + Y+S+V G    G LN+++  
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYK--ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           + +++Q+ ++PN F Y  L++  +K  +RG+  A+ L  ++ ++G + N    +  +  L
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGI--ALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            + GR EEA   F+D+ S+G  P+ V+Y  ++      G+  +A  +  EM        +
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 309 VTYNILIGSL---------AYH-------------------------GKTDHALKVLDEM 334
           V YN+LI  L         ++H                         G   +ALK+L+EM
Sbjct: 403 VAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ 394
                +P++ + N ++ RLC+ G+++  +  L+ M      P   T+   A+L    K +
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHK--AVLDASSKSR 520

Query: 395 EAFAIIQ------SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
            A  I+        +G K + S    Y  +I++ CR G   +A  +  +M   G   D  
Sbjct: 521 RADVILHMHDQLVGMGVKLDLST---YNTLISTFCRLGMIRRATLVFKDMMGKGILADII 577

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY++LI G C+   +++A  +   M      P+V+ +N LL GL  +R    +  +   M
Sbjct: 578 TYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637

Query: 509 IEKGQMPNETTYTILVEG 526
            E+G +PN TTY ILV G
Sbjct: 638 KERGLVPNATTYDILVSG 655



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 217/490 (44%), Gaps = 41/490 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +++ A   LE M ++G  PD+V    L+   CK   +  A K+M  +    + P+  
Sbjct: 29  RNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVI 88

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++  CK   +  A+ + ++M       + VTY  ++ GLC  G + ++      +
Sbjct: 89  TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+VPN F+Y+ L+++ +KE  V  A  L   ++ +G   ++V Y  L+ GL K G  
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F+ L  +   PN V+Y+ L+   C  G   +   LL EM+     P ++ Y+ +
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII------------------------ 350
           +      G  + A+ V+ +MV+    P+   Y  +I                        
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328

Query: 351 -----------ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEA 396
                        L   G+++   +    M  R   P+   Y   +M+ G    GK  +A
Sbjct: 329 EENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT--SMMDGFFKAGKESDA 386

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
           F I Q +  K +      Y  +I  L + GK Y++      M + G  PDS T++++I  
Sbjct: 387 FNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINA 445

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            C EG +  AL++   M+ Y  KP+    N L+  LC +   + ++++   M+  G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 517 ETTYTILVEG 526
            TT+  +++ 
Sbjct: 506 PTTHKAVLDA 515



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 221/497 (44%), Gaps = 40/497 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N   L L+ M  K   P+V+  ++++    K   + +A+ VM  MV   I+P+   Y  
Sbjct: 243 VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGT 302

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++   K    G A+ L ++M+  G   N    +S V  L   G + ++ +    ++ +G
Sbjct: 303 LIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRG 362

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L+P+   Y+ +++  +K      A  +  ++  K    ++V+YNVL+ GL K G+ E   
Sbjct: 363 LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE- 421

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F   +   G  P+  ++N ++ + C EG    A +LL EM      P  +T NIL+  L
Sbjct: 422 SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+ +  + +L++M+   F P+  ++  ++       + D+++   DQ+     K + 
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDL 541

Query: 379 GTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L +  C +G ++ A  + + +  K   +    Y  +I   C      +AF +  +
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE---------YD----------- 477
           M   G +P+  TY+ L+ GL    LI+EA  +   M+E         YD           
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661

Query: 478 ---------------YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
                          + P    +N L+    K ++   + E+ Q M  +G  PN +TY I
Sbjct: 662 MKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDI 721

Query: 523 LVEG---IAHQDELELS 536
           L+ G   ++ Q EL  S
Sbjct: 722 LICGWYKLSKQPELNKS 738



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 3/394 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L++  C+ G +  A++L+E M+  G   + VTYN+L+ G C +G+L  + + +  + 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              L PN  TY+ L++A  K + +  A+ + D++  K   P++V+Y  ++ GLCK G+ E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA   FR++   G  PN  SY  L+ SL  EG   EA  L   M        +V Y  L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G  ++A  +   +++    P+  +Y+ +I   C  G V+     L +M  +   
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQ 433
           PN   Y+ +       G + EA  +++ +  ++N  P  F Y  +I    +  +   A  
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKM-VQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM   G   +++   S +  L   G +EEA E+F  M      PD  N+ +++ G  
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           K+ +   +  + Q M EK    +   Y +L+ G+
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 178/379 (46%), Gaps = 35/379 (9%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K +DAF   + M  K    DVV    L+  L K  K +        M   G+ PD++++ 
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFN 440

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++N  CK+GN+G A++L+ +M+ YG   N++T N LV+ LC  G + +++  L+ ++  
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   T+  +L+A+ K R     + + D ++  G K +L +YN L++  C+ G    A
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRA 560

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F+D+  KG   ++++YN L+   C+    ++A  + ++M     SP + TYNIL+G 
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L+       A  ++++M +    P+A +Y+ +++     G +   VK   +M  +   P 
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPK 680

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TYN L                                  I+   +  K  QA +L+ E
Sbjct: 681 TRTYNVL----------------------------------ISCFAKGKKMSQAKELMQE 706

Query: 438 MTKYGFTPDSYTYSSLIRG 456
           M   G  P+S TY  LI G
Sbjct: 707 MQVRGIPPNSSTYDILICG 725



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 156/347 (44%), Gaps = 1/347 (0%)

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L++   +   +  A++LL+ +  +G  P++V+YN L+ G CK G    A +   ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
               EPNV++Y  L+ + C     E+A  +  EM      P +VTY  ++  L   GK +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  V  EM +    P+  SY  +I  L  EG V        +M  R    +   Y  L 
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             L   G    A  + Q L  +        Y  +I   C+ G   +   LL EM +    
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+   YSS++ G   +GL+ EA+++   M + +  P+V  +  L+ G  K+ +  ++L++
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           F+ M  +G   N       V  +     +E + E+ K++  R ++ +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 130/276 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L +A   L  M S G KP+ +    L+  LC A +++K + ++  M+  G  P  +
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  +++   K       + + +++   G   +  TYN+L+   C LG + ++      +
Sbjct: 508 THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG++ +  TY+ L+        +  A  +   ++ +G  PN+ +YN+LL GL      
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA      +  +G  PN  +Y+IL+      G  +E  +L  EM      P   TYN+L
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVL 687

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           I   A   K   A +++ EM      P++++Y+ +I
Sbjct: 688 ISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 231/509 (45%), Gaps = 38/509 (7%)

Query: 79  LNDAFLQLERM-VSKGHKP-DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           L+ A   L RM  S+G  P D      ++  L ++ K   A+KV + MV  G+ P+  +Y
Sbjct: 173 LDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITY 232

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             +++   K G++    +L ++M   G   N VTYN L+ GLC  G ++++   +D +  
Sbjct: 233 NTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMAS 292

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             ++P+ FTYS L +   +       + L  + + KG      + ++LL GLCK+G+  +
Sbjct: 293 HSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352

Query: 257 AIRFF-------------------------RDL----------PSKGFEPNVVSYNILLR 281
           A + F                         RDL           S+   P+ ++YN L+ 
Sbjct: 353 AKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC      +A +L+ EM+     P++ T+N LI +    G+ +    VL +M +   + 
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 472

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
              S+  ++   C  GK+   V  LD M ++   PN   YN +       G  ++A  ++
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLV 532

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + + N   S+    Y  ++  LCR  +  +A +L+Y +   G  PD  +Y+++I   C +
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 592

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G  ++ALE+   M +Y  +P +   + L+  L  + R      ++Q M+ K   P+ + Y
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQVV 549
            I+V+     +     A + KE+  + + 
Sbjct: 653 GIMVDAYVRCENDSKVASLKKEMSEKGIA 681



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 212/462 (45%), Gaps = 44/462 (9%)

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCM 180
           ++V++G  PD  ++  +V      G++  A+ ++ +M   +   P +  +YN ++ GL  
Sbjct: 147 LLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWR 206

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            G  + +L+  D ++  G+ PN  TY+ +++   K   + A  +L D ++  G KPN+V+
Sbjct: 207 SGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVT 266

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY------------------------ 276
           YNVLL+GLC+ GR +E      ++ S    P+  +Y                        
Sbjct: 267 YNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESL 326

Query: 277 -----------NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
                      +ILL  LC +G+  +A ++   +      PT V YN LI          
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD---QMFHRRCKPNEGTYN 382
            A  + ++M     RP   +YN +I  LC   K+++V K  D   +M      P+  T+N
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLC---KLEMVTKAEDLVMEMEKSGVDPSVETFN 443

Query: 383 GLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L    G  G++++ F ++  +  K   S    +  V+ + C+ GK  +A  +L +M   
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 503

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
              P++  Y+S+I      G  E+AL +   M+       +  +N LL GLC+S + D +
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 563

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            E+   +  +G  P+  +Y  ++    ++ + + + E+L+E+
Sbjct: 564 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 213/459 (46%), Gaps = 2/459 (0%)

Query: 62  PNRKPGNNNDTRH-RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV 120
           PNR   N     H +   L   F   ++M+  G KP+VV    LL  LC+  +M +   +
Sbjct: 227 PNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRAL 286

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           M+ M S  ++PD  +Y+ L + L + G     + L  +    G      T + L+ GLC 
Sbjct: 287 MDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCK 346

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            G + ++ Q  + L+  GLVP    Y+ L+    + R +  A  + + + ++  +P+ ++
Sbjct: 347 DGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHIT 406

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YN L+ GLCK     +A     ++   G +P+V ++N L+ +    G+ E+   +L++M 
Sbjct: 407 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 466

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                  ++++  ++ +   +GK   A+ +LD+M+     P+A  YN II      G  +
Sbjct: 467 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTE 526

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
             +  +++M +     +  TYN L   LC   ++ EA  +I +L N+        Y  +I
Sbjct: 527 QALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 586

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
           ++ C KG T +A +LL EM KYG  P   T  +L+  L   G + +   ++  M   + +
Sbjct: 587 SACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVE 646

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
           P    +  ++    +         + + M EKG   ++T
Sbjct: 647 PSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 9/404 (2%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL--IQKGLVPNAFTYSFLLEAAYKERGVH 220
           G   +T  +N +V+     G+L+ +L  L R+   +    P+AF+Y+ ++   ++     
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 211

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A+K+ D+++  G  PN ++YN ++ G  K G  E   R    +   G +PNVV+YN+LL
Sbjct: 212 DALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLL 271

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC  GR +E   L+ EM      P   TY+IL   L   G++   L +  E +K    
Sbjct: 272 SGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
             A + + ++  LC +GKV    +  + + H    P    YN L    C V  ++ AF I
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            + + ++        Y  +I  LC+     +A  L+ EM K G  P   T+++LI     
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G +E+   +   M++   K DV +F +++   CK+ +   ++ +   MI K   PN   
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
           Y  +++      + E      + L L + +  S V   ++ Y+ 
Sbjct: 512 YNSIIDAYIESGDTE------QALLLVEKMKNSGVSASIVTYNL 549


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 207/440 (47%), Gaps = 22/440 (5%)

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
           A + ++A++    M      P A  Y  +   L  +G +  A+ L  +M   G   N+ T
Sbjct: 157 AGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTT 216

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           Y  L+ GLC  G    +L+  D ++++G+VP+   Y+ LL +   E  +  A +LL  + 
Sbjct: 217 YIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMK 276

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
             G  P+ V+Y V L+GLCK GR +EA   F  L   GF   ++ Y+ L+  L   GR++
Sbjct: 277 ENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFD 336

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           E      EM G   SP I  Y ILI   A  G+T  A  +LDEM    F P    YN ++
Sbjct: 337 EGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLL 396

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQ 407
             L   G +D     + +M       +  T+N   M+CG+   G + +A  +   +G   
Sbjct: 397 KALFDVGNIDRAQSLMSEMLQNNVVLDSTTHN--IMICGLCKKGLIDKAMQVFDEMGEHG 454

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP--------------DSYTYSSL 453
                  Y  +I  L R G   +A  L ++M + G  P              D+ +   L
Sbjct: 455 CHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKL 513

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + G+C  G + +A ++   + E    PDV  +N L+ GLCK++  D +L +F+ +  KG 
Sbjct: 514 VDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGI 573

Query: 514 MPNETTYTILVEGI--AHQD 531
            P+E TY  L++G+  AH++
Sbjct: 574 SPDEITYGTLIDGLWRAHRE 593



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 212/446 (47%), Gaps = 21/446 (4%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RMVS G  P+      L+  LCK      A+K+ + M+  GI+PD   YT L++ LC +G
Sbjct: 204 RMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEG 263

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A +L+  M++ G P + VTY   + GLC  G ++++    + L   G       YS
Sbjct: 264 RIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYS 323

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++  ++       +    +++ K   P++  Y +L+    + GRT++A     ++  K
Sbjct: 324 CLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDK 383

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF P+   YN LL++L   G  + A  L++EM   +      T+NI+I  L   G  D A
Sbjct: 384 GFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKA 443

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           ++V DEM +    P+  +YN +I  L   G ++        +FH+    N  +   L + 
Sbjct: 444 MQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEA----RMLFHKMEMGNNPSLF-LRLT 498

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
            G  +V++                 E  + ++  +C+ G+  +A++LL  + + G  PD 
Sbjct: 499 LGANQVRDT----------------ESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDV 542

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY++LI GLC    ++ AL +F  ++     PD   +  L+ GL ++ R + +  +FQ 
Sbjct: 543 VTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQN 602

Query: 508 MIEKGQMPNETTYTILVEGIAHQDEL 533
           ++  G  P+   Y  ++  +    +L
Sbjct: 603 ILRSGGFPSLPIYNTMMRSLCRMKKL 628



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 205/437 (46%), Gaps = 14/437 (3%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           ++G+   ++++  LV      G    A++   +M D+        YN++ + L   G + 
Sbjct: 137 AAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVIL 196

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
            +L   +R++  G +PN+ TY  L++   K      A+K+ D+++ +G  P++  Y VLL
Sbjct: 197 LALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLL 256

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
           + LC EGR E+A R    +   G  P+ V+Y + L  LC  GR +EA      +  G  +
Sbjct: 257 SSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFT 316

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
             ++ Y+ LI  L   G+ D  L    EM+     P    Y  +I R    G+       
Sbjct: 317 LGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLL 376

Query: 366 LDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           LD+M  +   P+   YN  L  L  VG +  A +++  +           +  +I  LC+
Sbjct: 377 LDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCK 436

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME---------- 474
           KG   +A Q+  EM ++G  P   TY++LI GL   G++EEA  +F  ME          
Sbjct: 437 KGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLR 496

Query: 475 ---EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
                +   D ++   L+ G+C+S +   + ++ + +IE G +P+  TY  L+ G+    
Sbjct: 497 LTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAK 556

Query: 532 ELELSAEVLKELQLRQV 548
            L+ +  + KELQL+ +
Sbjct: 557 NLDGALRLFKELQLKGI 573



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/531 (23%), Positives = 234/531 (44%), Gaps = 55/531 (10%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA    + M+ +G  PDV   T LL  LC   +++ A +++  M  +G  PD  +YT  +
Sbjct: 232 DALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFL 291

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF---------- 190
           + LCK G V  A    E ++D G+    + Y+ L+ GL   G  ++ L +          
Sbjct: 292 SGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSIS 351

Query: 191 -------------------------LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
                                    LD +  KG VP+ F Y+ LL+A +    +  A  L
Sbjct: 352 PDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSL 411

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           + +++      +  ++N+++ GLCK+G  ++A++ F ++   G  P V++YN L+  L  
Sbjct: 412 MSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYR 471

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNI-------------LIGSLAYHGKTDHALKVLD 332
            G  EEA  L  +M+ G+     +   +             L+  +   G+   A K+L 
Sbjct: 472 AGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLR 531

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
            +++    P   +YN +I  LC    +D  ++   ++  +   P+E TY  L   L    
Sbjct: 532 GIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAH 591

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL--YEMTKYGFTPDSYT 449
           +  +A  + Q++           Y  ++ SLCR  K  QA  L   Y   KY  +P+   
Sbjct: 592 RENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEV 651

Query: 450 YSSLIRGLCME-GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
            ++  +  C E G ++E ++  + +++     + + +   ++GLC+ R+ D +L +F ++
Sbjct: 652 IANARK--CFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHIL 709

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLK-ELQLRQVVSESAVERLV 558
            E G +       +L+  +     L  + +++   L  R +VS+    RL+
Sbjct: 710 EEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLL 760



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 196/451 (43%), Gaps = 63/451 (13%)

Query: 51  TISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCK 110
           +ISP  ++YT   R+      T+       DAFL L+ M  KG  PD      LL  L  
Sbjct: 349 SISPDITLYTILIRRFAEAGRTK-------DAFLLLDEMKDKGFVPDTFCYNTLLKALFD 401

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
              + +A  +M  M+ + ++ D++++  ++  LCKKG +  AMQ+ ++M ++G     +T
Sbjct: 402 VGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMT 461

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF--------------TYSFLLEAAYKE 216
           YN+L+ GL   G L ++     ++ + G  P+ F              +   L++   + 
Sbjct: 462 YNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQS 520

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
             V  A KLL  II  G  P++V+YN L+ GLCK    + A+R F++L  KG  P+ ++Y
Sbjct: 521 GQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITY 580

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
             L+  L    R  +A  L   +      P++  YN ++ SL    K   A+ +  + + 
Sbjct: 581 GTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLP 640

Query: 337 GRFRPSAASYNPIIARLCSE-GKVDLVVKCL---DQMFHRRCKPNEGTYNGLAMLCGVGK 392
            ++  S        AR C E G +D  VK L   DQ++     PN  T   +  LC V K
Sbjct: 641 KKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGS-LNPNPYTIWVIG-LCQVRK 698

Query: 393 VQEA---FAIIQSLG--------------------------------NKQNSSPQEFYKY 417
           + +A   F I++  G                                +K+    Q     
Sbjct: 699 IDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNR 758

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
           ++ SLC + + + A  L + M   G+  D Y
Sbjct: 759 LLRSLCIRYRRHDAQALSWRMHLVGYDMDVY 789



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 148/361 (40%), Gaps = 36/361 (9%)

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A    L D  A G      ++  L+      GR +EA+  F  +      P    YN + 
Sbjct: 127 AMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVF 186

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
           + L   G    A  L   M      P   TY +L+  L   G    ALK+ DEM++    
Sbjct: 187 QVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIV 246

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEA--- 396
           P    Y  +++ LC+EG+++   + L  M    C P+E TY   L+ LC  G+V EA   
Sbjct: 247 PDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHR 306

Query: 397 FAIIQSLG--------------------------------NKQNSSPQEFYKYVITSLCR 424
           F ++Q  G                                 K  S     Y  +I     
Sbjct: 307 FELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAE 366

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            G+T  AF LL EM   GF PD++ Y++L++ L   G I+ A  +   M + +   D   
Sbjct: 367 AGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTT 426

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            N ++ GLCK    D +++VF  M E G  P   TY  L++G+     LE +  +  +++
Sbjct: 427 HNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKME 486

Query: 545 L 545
           +
Sbjct: 487 M 487



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 1/244 (0%)

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            +  L+ + +  G+   A++    M     RP+A  YN +   L   G + L +   ++M
Sbjct: 146 AFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRM 205

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
               C PN  TY  L   LC  G   +A  +   +  +      + Y  +++SLC +G+ 
Sbjct: 206 VSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRI 265

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A +LL  M + G  PD  TY+  + GLC  G ++EA   F ++++  +   +  ++ L
Sbjct: 266 EDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCL 325

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + GL ++ R D  L  +  M+ K   P+ T YTIL+   A     + +  +L E++ +  
Sbjct: 326 IDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGF 385

Query: 549 VSES 552
           V ++
Sbjct: 386 VPDT 389



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           SP  + + V   L  +      F  L +    G    S  + +L+      G  +EA+E 
Sbjct: 107 SPLLYSRAVSVLLASEPDAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEA 166

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M ++D +P    +NA+   L       L+L ++  M+  G +PN TTY +L++G+  
Sbjct: 167 FSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCK 226

Query: 530 Q----DELELSAEVLKE 542
           +    D L++  E+L+ 
Sbjct: 227 RGMAVDALKMFDEMLER 243


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 221/475 (46%), Gaps = 3/475 (0%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
            L  ++  G  PD    T+ +   C+A  +  A +V  +M   G +  A +YT L++ L 
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
             G V  AM +   M       +T  Y ++V GLC  G   ++   L+  +  G  PN  
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            Y+ L++       +  A+K+ + +      PN+ +Y  L+ GLCK G+ E A+  F  +
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G EPNVV+Y  L++  C EG  + A  LL  M+     P   T+++LI +L    K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + A   L  +VK   + +   Y  +I  LC  GK+D   + + +M      P+  +Y+ L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC   K+ +A  +++ +  K   +    Y  +I  L R+  +    ++  +M   G 
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD  TY+  +R  C EG +E+A  + V M +    P++  +N L+ G         +  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR--QVVSESAVER 556
            F++M+ KG  PNE +YT+L+  +  +   + S ++ K   ++  QV+ E   ER
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITER 568



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 202/429 (47%), Gaps = 1/429 (0%)

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           ME + S     +  +YT L+N  C  G++  A Q +  +   G   ++  Y S V G C 
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            G L  + +    +  +G +  AFTY+ LL        V  AM +   + A    P+   
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHV 179

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y  ++ GLC+ GRTEEA     +  S GFEPN+V YN L+   C  G  E A ++   MD
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G   SP + TY  LI  L   GK + A+ +   MV+    P+  +Y  +I   C+EG + 
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
              + L  M      PN+ T++ L   LC   KV+EA   + SL  K     +  Y  +I
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC+ GK   A +L+ +M   GF PD+++YSSLI GLC +  + +A  +   M E   +
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
                +  ++  L +   ++   ++F  MI  G  P+  TYT+ V     +  +E +  +
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 540 LKELQLRQV 548
           + ++  R V
Sbjct: 480 IVQMVDRGV 488



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 203/415 (48%), Gaps = 17/415 (4%)

Query: 90  VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           +S G +P++V    L+   C A +M+ A+KV E M  +   P+  +YT L++ LCK G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             AM L  +M + G   N VTY +L++G C  G+L  + + L  +   GLVPN +T+S L
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           ++A  K   V  A   L  ++ KG K N V Y  L+ GLCK G+ + A    + + S+GF
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIGSLAYHGKTDHA 327
            P+  SY+ L+  LC + +  +A  +L +M   G   SP  VTY I+I  L     ++  
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP--VTYTIIIDELVREVGSEGP 441

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            K+ D+M+     P   +Y   +   C EG+++     + QM  R   PN  TYN L   
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ------------L 434
              +G V +AF+  + +  K     ++ Y  ++  + +K  +  +              L
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVL 561

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           L ++T+      +  YS  IR LC    +EEA   F+ M+  +  P  D + +++
Sbjct: 562 LEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 209/468 (44%), Gaps = 46/468 (9%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M +    PD      +++ LC+A + ++A  ++E  +S+G  P+   Y  L++  C  G 
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           + +A+++ E M+      N  TY  L+ GLC  G + +++    R+++ GL PN  TY+ 
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++    E  +  A +LL  +   G  PN  +++VL+  LCK  + EEA  F   L  KG
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + N V Y  L+  LC  G+ + A+EL+ +M      P   +Y+ LI  L    K   A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            +L++M++   + S  +Y  II  L  E   +   K  D+M      P+  TY       
Sbjct: 408 LMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYT------ 461

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                                         + S C +G+   A  ++ +M   G  P+  
Sbjct: 462 ----------------------------VFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY++LIRG    GL+ +A   F VM    +KP+ D++  LL  + K   +D S++++++ 
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA 553

Query: 509 -----------IEKGQMP-NETTYTILVEGIAHQDELELSAEVLKELQ 544
                      I + Q+P     Y+  +  +   D LE +      +Q
Sbjct: 554 DMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQ 601



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 169/370 (45%), Gaps = 6/370 (1%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY+ L+ A      + AA + L  ++  G  P+  +Y   + G C+ G    A R F
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +P +G      +Y  LL  L   G   EA  +   M     +P    Y  ++  L   
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G+T+ A  +L+E +   F P+   YN +I   C+ G+++  +K  + M   RC PN  TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 382 NGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L   LC  GKV+ A  +   +           Y  +I   C +G    AF+LL+ M  
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P+ +T+S LI  LC    +EEA      + +   K +   + +L+ GLCK+ + D 
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL-----KELQLRQVVSESAVE 555
           + E+ Q MI +G +P+  +Y+ L++G+  Q +L  +  +L     K +Q   V     ++
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 556 RLVMQYDFEG 565
            LV +   EG
Sbjct: 431 ELVREVGSEG 440



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 146/331 (44%), Gaps = 47/331 (14%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+ +A L L  +V KG K + V  T+L+  LCK  K+  A ++M+ M+S G +
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PDA SY+ L++ LC++  +  A  ++E M                               
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDM------------------------------- 413

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
               ++KG+  +  TY+ +++   +E G     K+ D +IA G  P++V+Y V +   C+
Sbjct: 414 ----MEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCE 469

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EGR E+A      +  +G  PN+V+YN L+R     G   +A      M G    P   +
Sbjct: 470 EGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529

Query: 311 YNILIGSLAYHGKTDHA-----------LKVLDEMVKGRFRPSAAS-YNPIIARLCSEGK 358
           Y +L+  +     +D++           L+VL E +  R  P AA  Y+  I  LC   +
Sbjct: 530 YTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDR 589

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
           ++        M +    P+E  Y  +   C 
Sbjct: 590 LEEAKHFFMGMQNANLTPSEDVYTSIIDCCA 620


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 203/438 (46%), Gaps = 36/438 (8%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D+ ++DA  Q   M+   H P +V+   +L  L K      AI + + M   GI P+  +
Sbjct: 30  DNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVT 89

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
              L+NC C  G + ++  ++ K+   GY  NT+T  +L++GLC+ G + +S+ F D+++
Sbjct: 90  LNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVV 149

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            +G   N  +Y  LL    K      A+K L  I       N+V YN ++ GLCK+    
Sbjct: 150 AQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVN 209

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA  F+ ++ ++G  PNV++Y  L+   C+ G+   A  LL EM   + +P + TY ILI
Sbjct: 210 EAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILI 269

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPS-AASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
            +L   GK   A  +L EM   R +P+   +Y  ++   C    +D       +M     
Sbjct: 270 DALCKEGKVKEAKNLLAEM-HYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGI 328

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           +PN+ TY  L                                  I  LC+ G+   A +L
Sbjct: 329 QPNKYTYTAL----------------------------------IDGLCKGGRLKDAQKL 354

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             ++   G   D  TY+ +I GLC EG+++EAL I   ME+    P+V  F  ++  L K
Sbjct: 355 FQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFK 414

Query: 495 SRRTDLSLEVFQMMIEKG 512
               D + ++   MI KG
Sbjct: 415 KDENDKAEKLLHEMIAKG 432



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 192/433 (44%), Gaps = 36/433 (8%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  AI     M+     P    +  ++  L K  +   A+ L ++ME  G   N VT 
Sbjct: 31  NVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTL 90

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+   C LG +                  +F++S                 +L  I+ 
Sbjct: 91  NILINCFCHLGQM------------------SFSFS-----------------VLGKILK 115

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G +PN ++   L+ GLC +G  ++++ F   + ++GF+ N VSY  LL  LC  G    
Sbjct: 116 LGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRC 175

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A + L  ++       +V YN +I  L      + A     EM      P+  +Y  +I 
Sbjct: 176 AIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIG 235

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
             C  G++      L++M  +   PN  TY  L   LC  GKV+EA  ++  +  +   +
Sbjct: 236 GFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPA 295

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  ++   C+     +A  L  +M ++G  P+ YTY++LI GLC  G +++A ++F
Sbjct: 296 DVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLF 355

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             +       DV  +N ++ GLCK    D +L +   M + G +PN  T+ I++  +  +
Sbjct: 356 QDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKK 415

Query: 531 DELELSAEVLKEL 543
           DE + + ++L E+
Sbjct: 416 DENDKAEKLLHEM 428



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 128/229 (55%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  +N+A+     M ++G  P+V+  T L+   C A ++  A  ++  M+   I 
Sbjct: 200 DGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNIN 259

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++ LCK+G V  A  L+ +M   G P + VTY SL+ G C   NL+++   
Sbjct: 260 PNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATAL 319

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++ + G+ PN +TY+ L++   K   +  A KL  D++ KG   ++ +YNV++ GLCK
Sbjct: 320 FMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCK 379

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           EG  +EA+     +   G  PNVV++ I++RSL  +   ++A +LL EM
Sbjct: 380 EGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 38/292 (13%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +++V++G + + V    LL  LCK  + + AIK + M+  S    +   Y  +++ LCK 
Sbjct: 146 DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKD 205

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A     +M   G   N +TY +L+ G C+ G L  +   L+ +I K + PN +TY
Sbjct: 206 KLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTY 265

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGG-------------------------------- 234
           + L++A  KE  V  A  LL ++  +G                                 
Sbjct: 266 AILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKE 325

Query: 235 ---KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
              +PN  +Y  L+ GLCK GR ++A + F+DL  KG   +V +YN+++  LC EG  +E
Sbjct: 326 WGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDE 385

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KG--RFR 340
           A  + ++M+     P +VT+ I+I SL    + D A K+L EM+ KG  RFR
Sbjct: 386 ALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLLRFR 437



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 3/313 (0%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P +V +  +L  L K      AI   + +  KG EPN+V+ NIL+   C  G+   +  +
Sbjct: 50  PPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSV 109

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L ++      P  +T   L+  L   G+   ++   D++V   F+ +  SY  ++  LC 
Sbjct: 110 LGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCK 169

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G+    +K L  +       N   YN +   LC    V EA+     + N +   P   
Sbjct: 170 IGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEM-NARGIFPNVI 228

Query: 415 -YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I   C  G+   AF LL EM      P+ YTY+ LI  LC EG ++EA  +   M
Sbjct: 229 TYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEM 288

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
                  DV  + +LL G CK++  D +  +F  M E G  PN+ TYT L++G+     L
Sbjct: 289 HYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRL 348

Query: 534 ELSAEVLKELQLR 546
           + + ++ ++L ++
Sbjct: 349 KDAQKLFQDLLVK 361



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 85/163 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+ +A   L  M  +G   DVV  T+LL   CK   + KA  +   M   GI 
Sbjct: 270 DALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQ 329

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++ LCK G +  A +L + +   G   +  TYN ++ GLC  G L+++L  
Sbjct: 330 PNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAI 389

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
             ++   G +PN  T+  ++ + +K+     A KLL ++IAKG
Sbjct: 390 KSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKG 432



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 7/229 (3%)

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+   + M+     P    +  I+  L         +    QM  +  +PN  T N 
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 384 LA-MLCGVGKVQEAFAI---IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           L    C +G++  +F++   I  LG + N+        ++  LC KG+  ++     ++ 
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTIT---LTTLMKGLCLKGEVQKSVHFHDKVV 149

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             GF  +  +Y +L+ GLC  G    A++   ++E+     +V  +N ++ GLCK +  +
Sbjct: 150 AQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVN 209

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            + + +  M  +G  PN  TYT L+ G     +L  +  +L E+ L+ +
Sbjct: 210 EAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNI 258



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L+ A     +M   G +P+    T L+  LCK  ++K A K+ + ++  G  
Sbjct: 305 DGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCC 364

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  ++  LCK+G +  A+ +  KMED G   N VT+  ++R L      +++ + 
Sbjct: 365 IDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKL 424

Query: 191 LDRLIQKGLV 200
           L  +I KGL+
Sbjct: 425 LHEMIAKGLL 434


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 222/438 (50%), Gaps = 10/438 (2%)

Query: 99  VQATNLLYDLCKANKMKKAI---KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           V  T  L  LCK+ K+++A    + M+  +SS   P + +   ++  LCK G V  A+ L
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL---DRLIQKGLVPNAFTYSFLLEA 212
           +E M   GY  +  T++ L+  LC    + ++ +FL   +R I      + F+Y+ LL +
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTIST-RASSCFSYNSLLNS 130

Query: 213 AYKERGVHAAMKLLDDIIA-KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
             K + VH A  +   +++ +   P++VSY++L+ G CK      A + ++ +      P
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 190

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           NV +YN  L  L  +GR  +A  +  EM     SP ++TY+ LI   +   K D A ++ 
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
           + M+    RP+A +YN ++  LC E K D   +   +M  R C P++ TY  L    C V
Sbjct: 251 EAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNV 310

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           GK+++A  +   + +K +      Y  ++    R GK  +A QL   M      PD+ ++
Sbjct: 311 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSH 370

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEE-YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           + +I GL     +++A+E+F  ME+ +   PD+  +N+L+ GLC  +R   +++VF+ + 
Sbjct: 371 NIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEID 430

Query: 510 EKGQMPNETTYTILVEGI 527
                P+   + +L+E +
Sbjct: 431 RLKLSPDPHAFNVLLEAM 448



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 199/429 (46%), Gaps = 8/429 (1%)

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV---TYNSLVRGLC 179
           M V S    +  ++T  +  LCK G +  A +    M++    +      T +S+++ LC
Sbjct: 1   MAVESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELC 60

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI--IAKGGKPN 237
             G ++ +L  L+ +I++G  P+  T+S L+    K   +  A + L  +         +
Sbjct: 61  KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS 120

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWEEANELL 296
             SYN LL  LCK  +  +A   F  + S +   P+VVSY+IL+   C       A +L 
Sbjct: 121 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            +M   +  P + TYN  +  L   G+   A  V +EM+     P   +Y+ +I      
Sbjct: 181 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLA 240

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            K D   +  + M  R C+PN  TYN L   LC   K  EA  + + +  +     +  Y
Sbjct: 241 RKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTY 300

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             ++   C  GK  QA ++  EM   G  PD   Y+ L++G    G   EA ++F VM  
Sbjct: 301 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVS 360

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM-IEKGQMPNETTYTILVEGIAHQDELE 534
            + KPD  + N ++ GL K++R D ++EVF+ M  + G  P+  TY  L+ G+  +  L 
Sbjct: 361 RECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLS 420

Query: 535 LSAEVLKEL 543
            + +V KE+
Sbjct: 421 EAMKVFKEI 429



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 177/378 (46%), Gaps = 41/378 (10%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMK---------------------- 115
           +++ A   LE M+ +G+ PD+   + L+ +LCKA+K++                      
Sbjct: 64  RVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFS 123

Query: 116 ---------------KAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM 159
                          +A  +   MVS   ++PD  SY+ L++  CK   +G A +L ++M
Sbjct: 124 YNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQM 183

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
            D     N  TYN+ + GL   G +  +    + +I  G  P+  TYS L+      R  
Sbjct: 184 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKH 243

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A +L + +I++G +PN V+YN LL GLCKE + +EA   FR +  +G +P+ V+Y  L
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           L   C  G+ E+A E+  EM      P +V YN L+      GK   A ++   MV    
Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC 363

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-CKPNEGTYNGLAM-LCGVGKVQEAF 397
           +P   S+N +I  L    ++D  V+  ++M     C P+  TYN L   LCG  ++ EA 
Sbjct: 364 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 423

Query: 398 AIIQSLGN-KQNSSPQEF 414
            + + +   K +  P  F
Sbjct: 424 KVFKEIDRLKLSPDPHAF 441



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 163/309 (52%), Gaps = 2/309 (0%)

Query: 78  KLNDAFLQLERMVS-KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           K++ AF     MVS +   PDVV  + L+   CK +++ +A K+ + M+    +P+ ++Y
Sbjct: 136 KVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTY 195

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              +N L +KG +  A  + E+M   G   + +TY++L+ G  +    +Q+ +  + +I 
Sbjct: 196 NAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMIS 255

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G  PNA TY+ LL    KE     A +L   ++ +G  P+ V+Y  LL G C  G+ E+
Sbjct: 256 RGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQ 315

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+  F ++ SKG +P+VV+YN LL+     G+  EA +L   M   +  P  V++NI+I 
Sbjct: 316 AVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMID 375

Query: 317 SLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
            L+   + D A++V + M +     P   +YN +I  LC E ++   +K   ++   +  
Sbjct: 376 GLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLS 435

Query: 376 PNEGTYNGL 384
           P+   +N L
Sbjct: 436 PDPHAFNVL 444



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 136/249 (54%), Gaps = 1/249 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++ DA    E M+S G  PDV+  + L++    A K  +A ++ E M+S G  P+A 
Sbjct: 204 RKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAV 263

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK+     A +L  KM + G   + VTY +L+ G C +G + Q+++  D +
Sbjct: 264 TYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEM 323

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG  P+   Y+ LL+  ++      A +L   ++++  KP+ VS+N+++ GL K  R 
Sbjct: 324 VSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRL 383

Query: 255 EEAIRFFRDLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           ++A+  F  +    G  P++V+YN L+  LC E R  EA ++  E+D    SP    +N+
Sbjct: 384 DDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNV 443

Query: 314 LIGSLAYHG 322
           L+ ++   G
Sbjct: 444 LLEAMYAAG 452



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDA 133
           R  K  +A    + MVS+  KPD V    ++  L KA ++  A++V E M    G  PD 
Sbjct: 344 RAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 403

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
            +Y  L+  LC +  +  AM++ ++++      +   +N L+  +   G+
Sbjct: 404 VTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 218/475 (45%), Gaps = 2/475 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R H+   A     R++  G  PDV     L+    K  ++ KA ++   M+   + 
Sbjct: 130 DCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVS 189

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L++ LCK   +  + +++E+M D G   N  TYNSL+ G    G   +S++ 
Sbjct: 190 PDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRV 249

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +   GL+P     +  + A  +   +  A  + D ++ KG KPN++SY+ LL G   
Sbjct: 250 FKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAA 309

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG           + SKG  PN   +NIL+ +    G  ++A  +  +M      P  VT
Sbjct: 310 EGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 369

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +  +I SL   G+ D AL   + MV     PS A Y  +I   C+ G++    + + +M 
Sbjct: 370 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMM 429

Query: 371 HRRCKPNEGTY--NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           ++   P    Y  + +  L   G+V E   I+  +           +  ++   C  G  
Sbjct: 430 NKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNM 489

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +AF LL  M   G  P+ Y Y +L+ G C  G I++AL +F  M     KP    +N +
Sbjct: 490 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNII 549

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           L GL ++RRT  + ++F  MIE G   +  TY +++ G+   +  + +  +L++L
Sbjct: 550 LHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKL 604



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 215/451 (47%), Gaps = 2/451 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE+MV  G +P+     +L+Y    A   K++++V + M SSG+IP   +    ++ LC+
Sbjct: 215 LEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCR 274

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A  + + M   G   N ++Y++L+ G    G        ++ ++ KG+VPN   
Sbjct: 275 HNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRF 334

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+ A  +   +  AM + +D+  KG  P+ V++  +++ LC+ GR ++A+  F  + 
Sbjct: 335 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 394

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY-NILIGSLAYHGKT 324
             G  P+   Y  L++  C  G   +A EL++EM   D  P  V Y + +I +L   G+ 
Sbjct: 395 DIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRV 454

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
                ++D MV+   RP+  ++N ++   C  G ++     LD M     +PN   Y  L
Sbjct: 455 AEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 514

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C  G++ +A  + + + +K        Y  ++  L +  +T  A ++ +EM + G 
Sbjct: 515 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGT 574

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           T    TY  ++ GLC     +EA  +   +   + K D+  FN ++  + K  R   + E
Sbjct: 575 TVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKE 634

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +F  +   G +P   TY +++  +  ++  E
Sbjct: 635 LFAAISTYGLVPTVHTYNLMISNLIKEESYE 665



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 209/450 (46%), Gaps = 37/450 (8%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +Y  L++C  +      A+ +  ++   G   +  +YN+L+ G    G ++++ + 
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++I++ + P+  TY+ L++   K + +  + ++L+ ++  G +PN  +YN L+ G   
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +E++R F+++ S G  P VV+ N  + +LC   R +EA ++   M      P I++
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 311 Y-----------------------------------NILIGSLAYHGKTDHALKVLDEMV 335
           Y                                   NILI + A  G  D A+ + ++M 
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
                P   ++  +I+ LC  G++D  +   + M      P+E  Y  L    C  G++ 
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 395 EAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +A  +I  + NK    P  +++  +I +L ++G+  +   ++  M + G  P+  T++SL
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSL 479

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           + G C+ G +EEA  +   M     +P+   +  L+ G CK+ R D +L VF+ M+ KG 
Sbjct: 480 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV 539

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            P    Y I++ G+        + ++  E+
Sbjct: 540 KPTSVLYNIILHGLFQARRTTAAKKMFHEM 569



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 143/283 (50%), Gaps = 1/283 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L+DA  +   MV  G  P       L+   C   ++ KA +++  M++  I P   
Sbjct: 379 RIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 438

Query: 135 SY-TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            Y + ++N L K+G V     +++ M   G   N VT+NSL+ G C++GN+ ++   LD 
Sbjct: 439 KYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 498

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G+ PN + Y  L++   K   +  A+ +  D++ KG KP  V YN++L GL +  R
Sbjct: 499 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARR 558

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           T  A + F ++   G   ++ +Y ++L  LC     +EAN LL ++   +    I+T+NI
Sbjct: 559 TTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 618

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
           +I ++   G+   A ++   +      P+  +YN +I+ L  E
Sbjct: 619 VISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKE 661



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 133/264 (50%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P V   ++++ +L K  ++ +   +M++MV +G  P+  ++  L+   C  GN+  A  L
Sbjct: 436 PGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 495

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           ++ M   G   N   Y +LV G C  G ++ +L     ++ KG+ P +  Y+ +L   ++
Sbjct: 496 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQ 555

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            R   AA K+  ++I  G   ++ +Y V+L GLC+   T+EA      L +   + ++++
Sbjct: 556 ARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 615

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           +NI++ ++   GR +EA EL A +      PT+ TYN++I +L      + A  +   + 
Sbjct: 616 FNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVE 675

Query: 336 KGRFRPSAASYNPIIARLCSEGKV 359
           K    P +   N I+  L  + +V
Sbjct: 676 KSGRAPDSRLLNHIVRMLLKKAEV 699



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 143/319 (44%), Gaps = 1/319 (0%)

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           A    P + +YN+L+    +  R E A+  F  L   G  P+V SYN L+     EG  +
Sbjct: 115 AAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVD 174

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +A EL  +M     SP +VTYN LI  L    +   + +VL++MV    RP+  +YN +I
Sbjct: 175 KAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLI 234

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNS 409
               + G     V+   +M      P     N  +  LC   +++EA  I  S+  K   
Sbjct: 235 YGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPK 294

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  ++     +G       L+  M   G  P+   ++ LI      G++++A+ I
Sbjct: 295 PNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLI 354

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F  M+     PD   F  ++  LC+  R D +L  F  M++ G  P+E  Y  L++G  +
Sbjct: 355 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCN 414

Query: 530 QDELELSAEVLKELQLRQV 548
             EL  + E++ E+  + +
Sbjct: 415 HGELVKAKELISEMMNKDI 433



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 3/251 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ MV  G +P+VV   +L+   C    M++A  +++ M S GI P+   Y  LV+  CK
Sbjct: 461 MDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 520

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A+ +   M   G    +V YN ++ GL        + +    +I+ G   +  T
Sbjct: 521 NGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQT 580

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  +L    +      A  LL+ + A   K +++++N++++ + K GR +EA   F  + 
Sbjct: 581 YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAIS 640

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL---AYHG 322
           + G  P V +YN+++ +L  E  +EEA+ L   ++   R+P     N ++  L   A   
Sbjct: 641 TYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVA 700

Query: 323 KTDHALKVLDE 333
           K  + L ++DE
Sbjct: 701 KASNYLSIIDE 711



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/280 (21%), Positives = 112/280 (40%), Gaps = 18/280 (6%)

Query: 28  QIPNLHSFS-----------LNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRD 76
           Q PN+ +F+           + + F  + A   + I P   +Y       G   D   ++
Sbjct: 469 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY-------GTLVDGYCKN 521

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            +++DA      M+ KG KP  V    +L+ L +A +   A K+   M+ SG      +Y
Sbjct: 522 GRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTY 581

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++  LC+      A  L+EK+       + +T+N ++  +  +G   ++ +    +  
Sbjct: 582 GVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAIST 641

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            GLVP   TY+ ++    KE     A  L   +   G  P+    N ++  L K+    +
Sbjct: 642 YGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAK 701

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           A  +   +          + ++L      EG+  E  +LL
Sbjct: 702 ASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 241/498 (48%), Gaps = 49/498 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++  + +AF+   RMV +G   DVV  T L+  L KA     A  + ++++   ++
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++  CK G+V     L+++ME+     N + Y+S+V G    G LN+++  
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYK--ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           + +++Q+ ++PN F Y  L++  +K  +RG+  A+ L  ++ ++G + N    +  +  L
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGI--ALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            + GR EEA   F+D+ S+G  P+ V+Y  ++      G+  +A  +  EM        +
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 309 VTYNILIGSL---------AYH-------------------------GKTDHALKVLDEM 334
           V YN+LI  L         ++H                         G   +ALK+L+EM
Sbjct: 403 VAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ 394
                +P++ + N ++ RLC+ G+++  +  L+ M      P   T+   A+L    K +
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHK--AVLDASSKSR 520

Query: 395 EAFAIIQ------SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
            A  I+        +G K + S    Y  +I++ CR G   +A  +  +M   G   D  
Sbjct: 521 RADVILHMHDQLVGMGVKLDLST---YNTLISTFCRLGMIRRATLVFKDMMGKGILADII 577

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY++LI G C+   +++A  +   M      P+V+ +N LL GL  +R    +  +   M
Sbjct: 578 TYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637

Query: 509 IEKGQMPNETTYTILVEG 526
            E+G +PN TTY ILV G
Sbjct: 638 KERGLVPNATTYDILVSG 655



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 218/494 (44%), Gaps = 41/494 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ +++ A   LE M ++G  PD+V    L+   CK   +  A K+M  +    + 
Sbjct: 25  DGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLE 84

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++  CK   +  A+ + ++M       + VTY  ++ GLC  G + ++   
Sbjct: 85  PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + + G+VPN F+Y+ L+++ +KE  V  A  L   ++ +G   ++V Y  L+ GL K
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G    A   F+ L  +   PN V+Y+ L+   C  G   +   LL EM+     P ++ 
Sbjct: 205 AGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIV 264

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII-------------------- 350
           Y+ ++      G  + A+ V+ +MV+    P+   Y  +I                    
Sbjct: 265 YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMK 324

Query: 351 ---------------ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGK 392
                            L   G+++   +    M  R   P+   Y   +M+ G    GK
Sbjct: 325 SRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT--SMMDGFFKAGK 382

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
             +AF I Q +  K +      Y  +I  L + GK Y++      M + G  PDS T+++
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNT 441

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +I   C EG +  AL++   M+ Y  KP+    N L+  LC +   + ++++   M+  G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 513 QMPNETTYTILVEG 526
             P  TT+  +++ 
Sbjct: 502 FHPTPTTHKAVLDA 515



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 221/497 (44%), Gaps = 40/497 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N   L L+ M  K   P+V+  ++++    K   + +A+ VM  MV   I+P+   Y  
Sbjct: 243 VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGT 302

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++   K    G A+ L ++M+  G   N    +S V  L   G + ++ +    ++ +G
Sbjct: 303 LIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRG 362

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L+P+   Y+ +++  +K      A  +  ++  K    ++V+YNVL+ GL K G+ E   
Sbjct: 363 LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE- 421

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F   +   G  P+  ++N ++ + C EG    A +LL EM      P  +T NIL+  L
Sbjct: 422 SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+ +  + +L++M+   F P+  ++  ++       + D+++   DQ+     K + 
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDL 541

Query: 379 GTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L +  C +G ++ A  + + +  K   +    Y  +I   C      +AF +  +
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE---------YD----------- 477
           M   G +P+  TY+ L+ GL    LI+EA  +   M+E         YD           
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661

Query: 478 ---------------YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
                          + P    +N L+    K ++   + E+ Q M  +G  PN +TY I
Sbjct: 662 MKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDI 721

Query: 523 LVEG---IAHQDELELS 536
           L+ G   ++ Q EL  S
Sbjct: 722 LICGWYKLSKQPELNKS 738



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 3/394 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L++  C+ G +  A++L+E M+  G   + VTYN+L+ G C +G+L  + + +  + 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              L PN  TY+ L++A  K + +  A+ + D++  K   P++V+Y  ++ GLCK G+ E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA   FR++   G  PN  SY  L+ SL  EG   EA  L   M        +V Y  L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G  ++A  +   +++    P+  +Y+ +I   C  G V+     L +M  +   
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQ 433
           PN   Y+ +       G + EA  +++ +  ++N  P  F Y  +I    +  +   A  
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKM-VQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM   G   +++   S +  L   G +EEA E+F  M      PD  N+ +++ G  
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           K+ +   +  + Q M EK    +   Y +L+ G+
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 180/386 (46%), Gaps = 35/386 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K +DAF   + M  K    DVV    L+  L K  K +        M   G+ 
Sbjct: 375 DGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLA 433

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD++++  ++N  CK+GN+G A++L+ +M+ YG   N++T N LV+ LC  G + +++  
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ ++  G  P   T+  +L+A+ K R     + + D ++  G K +L +YN L++  C+
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCR 553

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G    A   F+D+  KG   ++++YN L+   C+    ++A  + ++M     SP + T
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNIL+G L+       A  ++++M +    P+A +Y+ +++     G +   VK   +M 
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMI 673

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            +   P   TYN L                                  I+   +  K  Q
Sbjct: 674 TKGFVPKTRTYNVL----------------------------------ISCFAKGKKMSQ 699

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRG 456
           A +L+ EM   G  P+S TY  LI G
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILICG 725



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 156/347 (44%), Gaps = 1/347 (0%)

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L++   +   +  A++LL+ +  +G  P++V+YN L+ G CK G    A +   ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
               EPNV++Y  L+ + C     E+A  +  EM      P +VTY  ++  L   GK +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  V  EM +    P+  SY  +I  L  EG V        +M  R    +   Y  L 
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             L   G    A  + Q L  +        Y  +I   C+ G   +   LL EM +    
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+   YSS++ G   +GL+ EA+++   M + +  P+V  +  L+ G  K+ +  ++L++
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           F+ M  +G   N       V  +     +E + E+ K++  R ++ +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 12/230 (5%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A L  + M+ KG   D++    L++  C ++ +KKA  V   M++ G+ P+  +Y  L+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            L     +  A  LV +M++ G   N  TY+ LV G   +GN+ + ++    +I KG VP
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL------------C 249
              TY+ L+    K + +  A +L+ ++  +G  PN  +Y++L+ G              
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           K     EA R F ++  KGF P   +   +  +L   G+  +A  +L ++
Sbjct: 740 KRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 241/498 (48%), Gaps = 49/498 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  ++  + +AF+   RMV +G   DVV  T L+  L KA     A  + ++++   ++
Sbjct: 165 DSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLV 224

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++  CK G+V     L+++ME+     N + Y+S+V G    G LN+++  
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYK--ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           + +++Q+ ++PN F Y  L++  +K  +RG+  A+ L  ++ ++G + N    +  +  L
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGI--ALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            + GR EEA   F+D+ S+G  P+ V+Y  ++      G+  +A  +  EM        +
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 309 VTYNILIGSL---------AYH-------------------------GKTDHALKVLDEM 334
           V YN+LI  L         ++H                         G   +ALK+L+EM
Sbjct: 403 VAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ 394
                +P++ + N ++ RLC+ G+++  +  L+ M      P   T+   A+L    K +
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHK--AVLDASSKSR 520

Query: 395 EAFAIIQ------SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
            A  I+        +G K + S    Y  +I++ CR G   +A  +  +M   G   D  
Sbjct: 521 RADVILHXHDQLVGMGVKLDLST---YNTLISTFCRLGMIRRATLVFKDMMGKGILADII 577

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY++LI G C+   +++A  +   M      P+V+ +N LL GL  +R    +  +   M
Sbjct: 578 TYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQM 637

Query: 509 IEKGQMPNETTYTILVEG 526
            E+G +PN TTY ILV G
Sbjct: 638 KERGLVPNATTYDILVSG 655



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 218/494 (44%), Gaps = 41/494 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ +++ A   LE M ++G  PD+V    L+   CK   +  A K+M  +    + 
Sbjct: 25  DGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLE 84

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT L++  CK   +  A+ + ++M       + VTY  ++ GLC  G + ++   
Sbjct: 85  PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSV 144

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + + G+VPN F+Y+ L+++ +KE  V  A  L   ++ +G   ++V Y  L+ GL K
Sbjct: 145 FREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFK 204

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G    A   F+ L  +   PN V+Y+ L+   C  G   +   LL EM+     P ++ 
Sbjct: 205 AGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIV 264

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII-------------------- 350
           Y+ ++      G  + A+ V+ +MV+    P+   Y  +I                    
Sbjct: 265 YSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMK 324

Query: 351 ---------------ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGK 392
                            L   G+++   +    M  R   P+   Y   +M+ G    GK
Sbjct: 325 SRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT--SMMDGFFKAGK 382

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
             +AF I Q +  K +      Y  +I  L + GK Y++      M + G  PDS T+++
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNT 441

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +I   C EG +  AL++   M+ Y  KP+    N L+  LC +   + ++++   M+  G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 513 QMPNETTYTILVEG 526
             P  TT+  +++ 
Sbjct: 502 FHPTPTTHKAVLDA 515



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 221/497 (44%), Gaps = 40/497 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N   L L+ M  K   P+V+  ++++    K   + +A+ VM  MV   I+P+   Y  
Sbjct: 243 VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGT 302

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++   K    G A+ L ++M+  G   N    +S V  L   G + ++ +    ++ +G
Sbjct: 303 LIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRG 362

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           L+P+   Y+ +++  +K      A  +  ++  K    ++V+YNVL+ GL K G+ E   
Sbjct: 363 LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE- 421

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F   +   G  P+  ++N ++ + C EG    A +LL EM      P  +T NIL+  L
Sbjct: 422 SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+ +  + +L++M+   F P+  ++  ++       + D+++   DQ+     K + 
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDL 541

Query: 379 GTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L +  C +G ++ A  + + +  K   +    Y  +I   C      +AF +  +
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE---------YD----------- 477
           M   G +P+  TY+ L+ GL    LI+EA  +   M+E         YD           
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661

Query: 478 ---------------YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
                          + P    +N L+    K ++   + E+ Q M  +G  PN +TY I
Sbjct: 662 MKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDI 721

Query: 523 LVEG---IAHQDELELS 536
           L+ G   ++ Q EL  S
Sbjct: 722 LICGWYKLSKQPELNKS 738



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 3/394 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L++  C+ G +  A++L+E M+  G   + VTYN+L+ G C +G+L  + + +  + 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              L PN  TY+ L++A  K + +  A+ + D++  K   P++V+Y  ++ GLCK G+ E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA   FR++   G  PN  SY  L+ SL  EG   EA  L   M        +V Y  L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G  ++A  +   +++    P+  +Y+ +I   C  G V+     L +M  +   
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQ 433
           PN   Y+ +       G + EA  +++ +  ++N  P  F Y  +I    +  +   A  
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKM-VQRNILPNVFVYGTLIDGYFKADQRGIALD 318

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM   G   +++   S +  L   G +EEA E+F  M      PD  N+ +++ G  
Sbjct: 319 LFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFF 378

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           K+ +   +  + Q M EK    +   Y +L+ G+
Sbjct: 379 KAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 179/386 (46%), Gaps = 35/386 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K +DAF   + M  K    DVV    L+  L K  K +        M   G+ 
Sbjct: 375 DGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLA 433

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD++++  ++N  CK+GN+G A++L+ +M+ YG   N++T N LV+ LC  G + +++  
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+ ++  G  P   T+  +L+A+ K R     +   D ++  G K +L +YN L++  C+
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCR 553

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G    A   F+D+  KG   ++++YN L+   C+    ++A  + ++M     SP + T
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YNIL+G L+       A  ++++M +    P+A +Y+ +++     G +   VK   +M 
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMI 673

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
            +   P   TYN L                                  I+   +  K  Q
Sbjct: 674 TKGFVPKTRTYNVL----------------------------------ISCFAKGKKMSQ 699

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRG 456
           A +L+ EM   G  P+S TY  LI G
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILICG 725



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 156/347 (44%), Gaps = 1/347 (0%)

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L++   +   +  A++LL+ +  +G  P++V+YN L+ G CK G    A +   ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
               EPNV++Y  L+ + C     E+A  +  EM      P +VTY  ++  L   GK +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  V  EM +    P+  SY  +I  L  EG V        +M  R    +   Y  L 
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             L   G    A  + Q L  +        Y  +I   C+ G   +   LL EM +    
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+   YSS++ G   +GL+ EA+++   M + +  P+V  +  L+ G  K+ +  ++L++
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           F+ M  +G   N       V  +     +E + E+ K++  R ++ +
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 213/426 (50%), Gaps = 13/426 (3%)

Query: 103 NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-ED 161
           +L+ +  +A   +++IKV  +M S G+ P   ++  L+  L K+G    A ++ ++M   
Sbjct: 154 SLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLST 213

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           YG   +T T+N L+RG CM G ++   +  + L + G  P+  TY+ L++   +   V  
Sbjct: 214 YGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTV 273

Query: 222 AMKLLDDIIAKGG--KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
           A  ++  +  K     PN+V+Y  L+ G C +   E+A+  F ++ ++G + N ++YN L
Sbjct: 274 AYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTL 333

Query: 280 LRSLCMEGRWEEANELLAEMDG-GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++ LC   ++E+  ++L    G G  SP   T+N L+    + G  D ALKV + M + +
Sbjct: 334 IKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELK 393

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-------CKPNEGTYNGL-AMLCGV 390
            +P +A+Y+ ++  LC  G  +     LD++  R+       CKP    YN +   LC  
Sbjct: 394 IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCET 453

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           GK ++A    + L  +    P   YK +I   C++G     ++LL  M +  F PD  TY
Sbjct: 454 GKTKKAEKAFRQLMRRGTQDPPS-YKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETY 512

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            SLI GL        AL+    M    ++P+   F+++L  L +  RT  S  + Q+M++
Sbjct: 513 ESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLD 572

Query: 511 KGQMPN 516
           K    N
Sbjct: 573 KNIRQN 578



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 209/461 (45%), Gaps = 52/461 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM--VSSGIIPDASSY 136
           ++D F     +   G +PDVV    L+  LC+A K+  A  V++ M   S  + P+  +Y
Sbjct: 236 VDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTY 295

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC----------------- 179
           T L+   C K  +  A+ + E+M + G   N +TYN+L++GLC                 
Sbjct: 296 TTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAG 355

Query: 180 -------------------MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
                                GNL+ +L+  +R+ +  + P++ TYS L+ +  +     
Sbjct: 356 DGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYE 415

Query: 221 AAMKLLDDIIAK-------GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            A  LLD ++ +       G KP + +YN +   LC+ G+T++A + FR L  +G + + 
Sbjct: 416 KAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DP 474

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
            SY  L+   C EG +E   ELL  M   D  P   TY  LI  L +  K   AL+ L++
Sbjct: 475 PSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEK 534

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGK 392
           M++   RP++++++ I+A+L  +G+       +  M  +  + N     G + +L G G 
Sbjct: 535 MLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGM 594

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ-LLYEMTKYGFTPDSYTYS 451
             +AF ++  L  K  S   E    +I  LC   K  Q  + LL+ +  + F  D    +
Sbjct: 595 NDKAFQLVHLLYGKGYSVKME---ELIRYLCHCRKVIQGSKLLLFSLESHQFV-DMDLCN 650

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++I  LC    + EA  ++  + E      +   N L + L
Sbjct: 651 TVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSL 691



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 221/512 (43%), Gaps = 62/512 (12%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E + + G  PD      L+   C    +    ++   +   G  PD  +Y  LV+ LC+ 
Sbjct: 209 EMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRA 268

Query: 147 GNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           G V  A  +V+ M  +      N VTY +L+RG C    + ++L   + ++ +GL  N  
Sbjct: 269 GKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNI 328

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           TY+ L++   + R       +L+     G   P+  ++N L+   C  G  ++A++ F  
Sbjct: 329 TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-------MDGGDRSPTIVTYNILIG 316
           +     +P+  +Y+ L+RSLC  G +E+A +LL +       + G    P +  YN +  
Sbjct: 389 MSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFK 448

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD---------------- 360
            L   GKT  A K   ++++ R      SY  +I   C EG  +                
Sbjct: 449 YLCETGKTKKAEKAFRQLMR-RGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLP 507

Query: 361 -------------------LVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAII 400
                              L ++ L++M     +PN  T++  LA L   G+  E+ ++I
Sbjct: 508 DFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLI 567

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC-M 459
           Q + +K       F    +  L   G   +AFQL++ +   G+   S     LIR LC  
Sbjct: 568 QLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGY---SVKMEELIRYLCHC 624

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
             +I+ +  +   +E + +  D+D  N ++  LC+  +   +  ++  ++E G       
Sbjct: 625 RKVIQGSKLLLFSLESHQF-VDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMG------- 676

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
              + + ++ Q++L++S E  ++L+  + VS+
Sbjct: 677 ---VHQQLSCQNQLKVSLEAGEKLEEAEFVSK 705



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 185/418 (44%), Gaps = 51/418 (12%)

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY-----------------SFLLEAAYK 215
           ++++ L  L + +++LQF +   + G      +Y                 +FL     +
Sbjct: 81  TVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR 140

Query: 216 ERGV---------------------HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            RG+                       ++K+   + + G  P++V++N LLT L K GRT
Sbjct: 141 SRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRT 200

Query: 255 EEAIRFFRD-LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             A + + + L + G  P+  ++NIL+R  CM G  ++   +  ++      P +VTYN 
Sbjct: 201 NMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNT 260

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           L+  L   GK   A  V+  M K      P+  +Y  +I   C++ +++  +   ++M +
Sbjct: 261 LVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVN 320

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTY 429
           +  K N  TYN L   LC   K ++   I++        SP    +  ++   C  G   
Sbjct: 321 QGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLD 380

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG-------LIEEALEIFVVMEEYDYKPDV 482
            A ++   M++    PDS TYS+L+R LC  G       L+++ LE  +++     KP V
Sbjct: 381 DALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLV 440

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             +N +   LC++ +T  + + F+ ++ +G   +  +Y  L+ G   +   E   E+L
Sbjct: 441 AAYNPIFKYLCETGKTKKAEKAFRQLMRRGT-QDPPSYKTLIMGHCKEGTFESGYELL 497



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 3/157 (1%)

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM-TKYGFTPDSY 448
            G  QE+  +   + +   S     +  ++T L ++G+T  A ++  EM + YG TPD++
Sbjct: 162 AGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTF 221

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           T++ LIRG CM G++++   IF  +  +  +PDV  +N L+ GLC++ +  ++  V + M
Sbjct: 222 TFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGM 281

Query: 509 IEKGQ--MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +K     PN  TYT L+ G   + E+E +  V +E+
Sbjct: 282 GKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEM 318


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 225/497 (45%), Gaps = 36/497 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M+ +   PDV     L+  LC     KK+  +M+ M  SG  P   +Y  +++  CK
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG    A++L++ M   G   +  TYN L+  LC      +    L  + ++ + PN  T
Sbjct: 241 KGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVT 300

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ LL     E  V  A +LL++++  G  PN V++N L+ G   EG  +EA++ F  + 
Sbjct: 301 YNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMME 360

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +KG     VSY +LL  LC    ++ A      M         +TY  +I  L  +G  D
Sbjct: 361 AKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+ +L+EM K    P   +Y+ +I   C  G++    + + +++     PN   Y+ L 
Sbjct: 421 EAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLI 480

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT---------------- 428
              C +G ++E   I +++  + N+     +  ++TSLC+ GK                 
Sbjct: 481 YNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540

Query: 429 -------------------YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                               +AF +  EMTK G  P  +TY SL++GLC  G +  A + 
Sbjct: 541 PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              ++      D    N L+  +CKS   D ++ +F  M+++  +P+  TYT L+ G+  
Sbjct: 601 LKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR 660

Query: 530 QDELELSAEVLKELQLR 546
           + +  ++    KE + R
Sbjct: 661 KGKTVIAILFAKEAEAR 677



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 213/480 (44%), Gaps = 2/480 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D    +    +A      M +KG     V    LL  LCK  +   A      M  +G+ 
Sbjct: 341 DGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
               +YT +++ LCK G +  A+ ++ +M   G   + VTY++L+ G C +G L  + + 
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEI 460

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + R+ + GL PN   YS L+    +   +   +++ + +I +G  P+  ++NVL+T LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCK 520

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+  EA  F R + S G  PN VS++ L+      G   +A  +  EM      PT  T
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFT 580

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+  L   G    A K L  +            N +I  +C  G +D  V    +M 
Sbjct: 581 YGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMV 640

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKT 428
            R   P+  TY  L + LC  GK   A    +    + N  P +  Y   +  + + G+ 
Sbjct: 641 QRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQW 700

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
              F    +M K G T D  T +++I G    G IE+  ++   M   +  P++  +N L
Sbjct: 701 KAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNIL 760

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           L G  K +    S  +++ MI  G +P++ T   ++ GI   + LE+  ++LK    R V
Sbjct: 761 LHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGV 820



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 212/471 (45%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+  + D+      M   G  P V     +L  + K+ +       ++ M+   I PD +
Sbjct: 135 REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVA 194

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+N LC +G+   +  L++KME  GY    VTYN+++   C  G    +++ LD +
Sbjct: 195 TFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG+  +  TY+ L+    +         LL D+  +   PN V+YN LL G   EG+ 
Sbjct: 255 NLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKV 314

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A +   ++ + G  PN V++N L+     EG ++EA ++   M+      T V+Y +L
Sbjct: 315 LIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVL 374

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L  + + D A      M +        +Y  +I  LC  G +D  V  L++M     
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGI 434

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY+ L    C VG+++ A  I+  +     S     Y  +I + CR G   +  +
Sbjct: 435 DPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIR 494

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M   G TPD +T++ L+  LC  G + EA E    M      P+  +F+ L+ G  
Sbjct: 495 IYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYG 554

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            S     +  VF  M + G  P   TY  L++G+     L  + + LK LQ
Sbjct: 555 SSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQ 605



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 247/585 (42%), Gaps = 118/585 (20%)

Query: 87   ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC---- 142
            E M+ +G+ PD      L+  LCKA K+ +A + M  M S GI+P+A S+  L+N     
Sbjct: 497  EAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSS 556

Query: 143  -------------------------------LCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
                                           LCK G++  A + ++ +++     +TV  
Sbjct: 557  GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMC 616

Query: 172  NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
            N+L+  +C  GNL++++     ++Q+ ++P++FTY+ L+    ++     A+    +  A
Sbjct: 617  NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 232  KGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +G   PN V Y   + G+ K G+ +    F + +   G   +VV+ N ++      G+ E
Sbjct: 677  RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 291  EANELLAEMDGGDRSPTIVTYNILIGSLAYHG--KTDH---------------------- 326
            + ++LL EM   ++ P + TYNIL+     HG  K  H                      
Sbjct: 737  KTHDLLFEMGNQNQGPNLTTYNILL-----HGYSKRKHVSTSFMLYRSMILSGILPDKLT 791

Query: 327  ----------------ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----------- 359
                             LK+L   +         ++N +I++ C+ G++           
Sbjct: 792  CYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMT 851

Query: 360  -----------DLVVKCLDQ---------MFHRRCK----PNEGTYNGLAM-LCGVGKVQ 394
                       D +V  L++         + H   K    P    Y GL   LC VG ++
Sbjct: 852  SLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIK 911

Query: 395  EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
             AF + + +   +   P      ++ +L + GK  +A  LL  M K    P   ++++L+
Sbjct: 912  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLM 971

Query: 455  RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
               C  G + EALE+ VVM     K D+ ++N L+ GLC      ++ E+F+ M   G +
Sbjct: 972  HLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFL 1031

Query: 515  PNETTYTILVEGIAHQ-DELELSAEVLKELQLRQVVSESAVERLV 558
             N TTY  LV GI  Q  E   +  +LK+L  R  ++  +   ++
Sbjct: 1032 ANVTTYKALVGGILSQGTEFSGTDIILKDLLARGFITAMSFNHMI 1076



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 168/360 (46%), Gaps = 1/360 (0%)

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           +N   ++ L+R     G +  SL+    +   G  P+ +T + +L +  K     +    
Sbjct: 121 SNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSF 180

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           L +++ +   P++ ++N+L+  LC EG  +++    + +   G+ P +V+YN +L   C 
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +GR++ A ELL  M+    +  + TYN+LI  L    ++     +L +M K    P+  +
Sbjct: 241 KGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVT 300

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
           YN ++    +EGKV +  + L++M      PN  T+N L       G  +EA  +   + 
Sbjct: 301 YNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMME 360

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K     +  Y  ++  LC+  +   A      M + G      TY+ +I GLC  G ++
Sbjct: 361 AKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EA+ +   M +    PD+  ++AL+ G C+  R   + E+   +   G  PN   Y+ L+
Sbjct: 421 EAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLI 480



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 184/417 (44%), Gaps = 4/417 (0%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDASSYT 137
            L+ A      MV +   PD    T+L+  LC+  K   AI   +   + G ++P+   YT
Sbjct: 629  LDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYT 688

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
              V+ + K G         ++M+  G   + VT N+++ G   +G + ++   L  +  +
Sbjct: 689  CFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQ 748

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN-LVSYNVLLTGLCKEGRTEE 256
               PN  TY+ LL    K + V  +  L   +I  G  P+ L  Y+++L G+C+    E 
Sbjct: 749  NQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIIL-GICESNMLEI 807

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
             ++  +    +G E +  ++N+L+   C  G    A +++  M     S    T + ++ 
Sbjct: 808  GLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVS 867

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF-HRRCK 375
             L  + +   +  VL EM K    P +  Y  ++  LC  G +       ++M  H+ C 
Sbjct: 868  VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICP 927

Query: 376  PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            PN      +  L   GK  EA  +++S+   +       +  ++   C+ G   +A +L 
Sbjct: 928  PNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELR 987

Query: 436  YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
              M+  G   D  +Y+ LI GLC +G +  A E+F  M+   +  +V  + AL+ G+
Sbjct: 988  VVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGI 1044



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 135/294 (45%), Gaps = 5/294 (1%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R H ++ +F+    M+  G  PD +   +++  +C++N ++  +K+++  +  G+  D  
Sbjct: 767  RKH-VSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRH 825

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++  L++  C  G + +A  +V  M   G   +  T +++V  L       +S   L  +
Sbjct: 826  TFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEM 885

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             ++G+ P +  Y  LL    +   +  A  + +++IA    P  V+ + ++  L K G+ 
Sbjct: 886  SKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 945

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +EA    R +      P + S+  L+   C  G   EA EL   M        +V+YN+L
Sbjct: 946  DEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVL 1005

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK----VDLVVK 364
            I  L   G    A ++ +EM +  F  +  +Y  ++  + S+G      D+++K
Sbjct: 1006 ITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILK 1059



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 1/179 (0%)

Query: 371 HRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
           +R C  N   ++ L  +    G +Q++  I + +G    +        ++ S+ +  +  
Sbjct: 116 YRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDV 175

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             +  L EM K    PD  T++ LI  LC EG  +++  +   ME+  Y P +  +N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVL 235

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
              CK  R   ++E+   M  KG   +  TY +L+  +   +       +L++++ R +
Sbjct: 236 HWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMI 294


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 196/422 (46%), Gaps = 2/422 (0%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G+ PDA S+  LV   C++G    A  L+  M   G+  ++ T   +VR  C  G     
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                R+++ G  PN   Y+  ++   K   V  A  +L++++ KG KPN+ ++  L+ G
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 248 LCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           LCK G TE A R F  L  S  ++PNV +Y +++   C EG+   A  LL  M     +P
Sbjct: 296 LCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
              TY  LI      G  D A +++++M    F P+  +YN II   C +GK+    K L
Sbjct: 356 NTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL 415

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
                +   P++ TY  L    C  G +  A  +   +         + Y  +I   C++
Sbjct: 416 RMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQ 475

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            +  Q+ QL  +    G  P   TY+S+I G C  G    AL++F  M ++   PD   +
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITY 535

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            AL+ GLCK  R + +  +F+ M++K  +P + T   L      +D+  ++   L  L  
Sbjct: 536 GALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDK 595

Query: 546 RQ 547
           RQ
Sbjct: 596 RQ 597



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 218/459 (47%), Gaps = 11/459 (2%)

Query: 110 KANKMKKAIKVMEMMVSSGI--IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           + N++++A  ++  + S G+  + + +++   V  L ++ +  +A Q  + M   G   +
Sbjct: 125 ETNRLREATDMLLELRSHGLPLVVETANWVLRVG-LRQRHHFAHARQAFDGM---GVRPD 180

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
             ++ +LV G C  G   ++   L  + ++G   ++ T + ++ A  ++        L  
Sbjct: 181 ARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFG 240

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            ++  G  PN+V+Y   + GLCK G  ++A     ++  KG +PNV ++  L+  LC  G
Sbjct: 241 RMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIG 300

Query: 288 RWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
             E A  L  ++       P + TY ++IG     GK   A  +L  MV+    P+  +Y
Sbjct: 301 WTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 360

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGN 405
             +I   C  G  D   + +++M      PN  TYN +    C  GK+Q+A+ +++ +  
Sbjct: 361 TTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLR-MAT 419

Query: 406 KQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            Q   P +  Y  +IT  C++G    A  L  +M +    PD  TY+++I   C +  +E
Sbjct: 420 SQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQME 479

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           ++ ++F         P    + +++ G C+  ++  +L+VF+ M++ G +P+  TY  L+
Sbjct: 480 QSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALI 539

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            G+  +  LE  A  L E  L + +    V  + + Y++
Sbjct: 540 SGLCKESRLE-EARALFETMLDKHMVPCDVTCVTLAYEY 577



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 202/467 (43%), Gaps = 38/467 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  +A   L  M  +G   D    T ++   C+  + +    +   MV  G  P+  +YT
Sbjct: 196 RFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYT 255

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ- 196
             V+ LCK+G V  A  ++E+M   G   N  T+ SL+ GLC +G   ++ +   +L++ 
Sbjct: 256 AWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKS 315

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
               PN  TY+ ++    KE  +  A  LL  ++ +G  PN  +Y  L+ G C+ G  + 
Sbjct: 316 SSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDR 375

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A      +  +GF PN+ +YN ++   C +G+ ++A ++L         P  VTY +LI 
Sbjct: 376 AFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLIT 435

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G   +AL + ++M +    P   +Y  IIA  C + +++   +  D+       P
Sbjct: 436 EHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVP 495

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            + TY   +M+ G  +V                                GK+  A ++  
Sbjct: 496 TKQTYT--SMIAGYCRV--------------------------------GKSTSALKVFE 521

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M ++G  PD  TY +LI GLC E  +EEA  +F  M +    P       L    C+  
Sbjct: 522 RMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRD 581

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +T +++     + ++ Q         LV  ++  D L+ ++  LK +
Sbjct: 582 KTTIAVSFLDGLDKRQQAHAADA---LVRKLSAVDNLDAASLFLKNV 625



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 183/378 (48%), Gaps = 5/378 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGIIPDASSYT 137
           +  AF  LE MV KG KP+V   T+L+  LCK    ++A ++ ++++ SS   P+  +YT
Sbjct: 267 VKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYT 326

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++   CK+G +  A  L+ +M + G   NT TY +L+ G C  G+ +++ + ++++  +
Sbjct: 327 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLE 386

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +PN +TY+ ++    K+  +  A K+L    ++G  P+ V+Y +L+T  CK+G    A
Sbjct: 387 GFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYA 446

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +      P++ +Y  ++   C + + E++ +L  +       PT  TY  +I  
Sbjct: 447 LDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAG 506

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK+  ALKV + MV+    P   +Y  +I+ LC E +++      + M  +   P 
Sbjct: 507 YCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPC 566

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           + T   LA   C   K   A + +  L  +Q +   +    ++  L        A   L 
Sbjct: 567 DVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAAD---ALVRKLSAVDNLDAASLFLK 623

Query: 437 EMTKYGFTPDSYTYSSLI 454
            +    +  D  TY+S I
Sbjct: 624 NVLDKHYAVDHATYTSFI 641



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 146/341 (42%), Gaps = 40/341 (11%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           FL+L +  S  +KP+V   T ++   CK  K+ +A  ++  MV  G+ P+ ++YT L++ 
Sbjct: 309 FLKLVK--SSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDG 366

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            C+ G+   A +L+ KM+  G+  N  TYN+++ G C  G + Q+ + L     +GL P+
Sbjct: 367 HCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPD 426

Query: 203 AFTYSFLLEAAYKERGVHAAMKLL-----------------------------------D 227
             TY+ L+    K+  +  A+ L                                    D
Sbjct: 427 KVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFD 486

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
             ++ G  P   +Y  ++ G C+ G++  A++ F  +   G  P+ ++Y  L+  LC E 
Sbjct: 487 KCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKES 546

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           R EEA  L   M      P  VT   L        KT  A+  LD + K   R  A + +
Sbjct: 547 RLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDK---RQQAHAAD 603

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            ++ +L +   +D     L  +  +    +  TY      C
Sbjct: 604 ALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSC 644



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 3/280 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R    + AF  + +M  +G  P++     ++   CK  K+++A KV+ M  S G+ 
Sbjct: 365 DGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLC 424

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT L+   CK+G++ YA+ L  +M +     +  TY +++   C    + QS Q 
Sbjct: 425 PDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQL 484

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D+ +  GLVP   TY+ ++    +     +A+K+ + ++  G  P+ ++Y  L++GLCK
Sbjct: 485 FDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCK 544

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           E R EEA   F  +  K   P  V+   L    C   R ++    ++ +DG D+      
Sbjct: 545 ESRLEEARALFETMLDKHMVPCDVTCVTLAYEYC---RRDKTTIAVSFLDGLDKRQQAHA 601

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            + L+  L+     D A   L  ++   +    A+Y   I
Sbjct: 602 ADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFI 641


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 217/455 (47%), Gaps = 6/455 (1%)

Query: 103 NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
            +L+   K  + K A+ V+E M    I  D  +Y  +++ LC+      A  L+++M   
Sbjct: 194 TILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKD 253

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
               +  TYN+L+ G    G +N +    + ++++ LVP+  TY+ +++   + R +  A
Sbjct: 254 DLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKA 313

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           + +L ++   G  P+ ++Y+ LL G CK      A+    DL S+G   N     IL+  
Sbjct: 314 LSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDG 373

Query: 283 LCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
            C  G   +A ++L  M  DG D  P +VTY+ LI  +    K     ++L  M K    
Sbjct: 374 FCQVGEISKAKQILKSMLEDGID--PDVVTYSALINGMCRMAKMHETKEILSRMQKSGIL 431

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAI 399
           P+   Y  +I   C  G V + +K    ++ R    N   +N  L      G + EA   
Sbjct: 432 PNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHF 491

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            Q +     S     +  +I S C +GK  +AF +  +M +YG +P+  TY +L+RGLC 
Sbjct: 492 RQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQ 551

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G + +A +    + +     D   FNALLLG+CK    D +L++ + M++   +P+  T
Sbjct: 552 GGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHT 611

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           YTIL+ G   + ++ L A V+ ++ L + V    V
Sbjct: 612 YTILLSGFCRKGKI-LPALVMLQMMLEKGVVPDTV 645



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 237/515 (46%), Gaps = 39/515 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+N A      M+ +   P V   T ++   C+  ++ KA+ V+  M  +G++P   +Y+
Sbjct: 274 KINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYS 333

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK   +G A+ L+  ++  G   N      L+ G C +G ++++ Q L  +++ 
Sbjct: 334 ALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLED 393

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+  TYS L+    +   +H   ++L  +   G  PN V Y  L+   CK G  + A
Sbjct: 394 GIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVA 453

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ F D+  +G   N V +N LLR+   EG   EA      M   + S   V++N +I S
Sbjct: 454 LKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDS 513

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
             + GK   A  V D+MV+    P+  +Y  ++  LC  G +    + +  +       +
Sbjct: 514 YCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVD 573

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLL 435
           E T+N L + +C  G + EA  I + +  K N  P    Y  +++  CRKGK   A  +L
Sbjct: 574 EKTFNALLLGICKYGTLDEALDICEKM-VKNNCLPDIHTYTILLSGFCRKGKILPALVML 632

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF--VVMEEYDYK-------------- 479
             M + G  PD+  Y+ L+ GL  EG ++ A  +F  ++ +E  Y               
Sbjct: 633 QMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLK 692

Query: 480 --------------------PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
                               P+  ++N L+ G  K  +   SL +++ M+ KG  P+  T
Sbjct: 693 GGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVT 752

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           Y +L+ G++    ++++ + L+++ L  +  +  V
Sbjct: 753 YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLV 787



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 247/550 (44%), Gaps = 56/550 (10%)

Query: 74   HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
            HR  K+ +AF   + MV  GH P+V    NLL  LC+   + +A + M  ++      D 
Sbjct: 516  HRG-KIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDE 574

Query: 134  SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             ++  L+  +CK G +  A+ + EKM       +  TY  L+ G C  G +  +L  L  
Sbjct: 575  KTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQM 634

Query: 194  LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------------------- 234
            +++KG+VP+   Y+ LL     E  V AA  +  +II K G                   
Sbjct: 635  MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGG 694

Query: 235  -----------------KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                              PN  SYN+L+ G  K G+  +++  ++ +  KG  P+ V+Y 
Sbjct: 695  NVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYR 754

Query: 278  ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            +L+  L   G  + A + L +M      P  + ++ILI S +   K  +AL++ + M   
Sbjct: 755  LLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCL 814

Query: 338  RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA 396
               PS+ +++ +I  L  +  +D   + L +M     +PN   Y  L    C VG++  A
Sbjct: 815  HLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRA 874

Query: 397  FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            F + + +        +     +I  LCR GK  +A  +   M + G  P   T+++L+  
Sbjct: 875  FRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHS 934

Query: 457  LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            LC E  I +AL +  +ME    K DV ++N L+ GLCK +    +L+++  M  KG  PN
Sbjct: 935  LCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPN 994

Query: 517  ETTYTILVEGIAHQDELELSAEVLKELQLRQVVS------------ESAVERLVM----- 559
             TTY  L   +     ++   E+L++++ R ++             E A+ RL M     
Sbjct: 995  VTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAFKQLENLERRMEDAIRRLNMIRRCR 1054

Query: 560  -QYDFEGIEV 568
             +  F G+E+
Sbjct: 1055 KEVTFRGVEL 1064



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 219/471 (46%), Gaps = 1/471 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +   A   LE M     + D+     ++  LC+  +  +A  +++ M    + PD  +Y 
Sbjct: 204 RFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYN 263

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N    +G + +A  +   M       +  TY +++ G C    ++++L  L  +   
Sbjct: 264 TLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEIT 323

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++P+  TYS LL    K   +  A+ L+ D+ ++G   N     +L+ G C+ G   +A
Sbjct: 324 GVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKA 383

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +  + +   G +P+VV+Y+ L+  +C   +  E  E+L+ M      P  V Y  LI  
Sbjct: 384 KQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICY 443

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    ALK   ++ +     +   +N ++     EG +         M       N
Sbjct: 444 YCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFN 503

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             ++N +    C  GK+ EAF++   +    +S     Y+ ++  LC+ G   QA Q ++
Sbjct: 504 SVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMF 563

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            +       D  T+++L+ G+C  G ++EAL+I   M + +  PD+  +  LL G C+  
Sbjct: 564 CLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKG 623

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           +   +L + QMM+EKG +P+   YT L+ G+ ++ +++ ++ V +E+  ++
Sbjct: 624 KILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 674



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 166/358 (46%), Gaps = 8/358 (2%)

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGV---HAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           L R+I +    N   +  L++A  KER V     A+  +DD    G K + V+ N +L  
Sbjct: 73  LLRIISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDC---GFKASPVACNSILKA 129

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           L +EG ++    F R+  ++ F  +V + NILL SLC  G + +A ++L +M     S +
Sbjct: 130 LVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNS 189

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
             TYN ++      G+   AL VL++M +   +    +YN +I +LC   +       L 
Sbjct: 190 -ATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLK 248

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M      P+E TYN L     G GK+  A  +   +  +        Y  +I   CR  
Sbjct: 249 RMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNR 308

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +  +A  +L EM   G  P   TYS+L+ G C   ++  AL++ V ++      +     
Sbjct: 309 RIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCT 368

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            L+ G C+      + ++ + M+E G  P+  TY+ L+ G+    ++  + E+L  +Q
Sbjct: 369 ILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQ 426



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 153/334 (45%), Gaps = 44/334 (13%)

Query: 89   MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
            MV KG +PD V    L+  L +   +  A+K +E MV  GI PD   +  L+    +K  
Sbjct: 741  MVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSK 800

Query: 149  VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
            +  A++L   M+      ++ T+++++ GL     L+QS + L  ++Q GL PN   Y  
Sbjct: 801  MHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIA 860

Query: 209  LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            L+ A  +   +  A +L +++ A G  P  V+ + ++ GLC+ G+ EEA+  F ++   G
Sbjct: 861  LVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSG 920

Query: 269  FEP-----------------------------------NVVSYNILLRSLCMEGRWEEAN 293
              P                                   +VVSYN+L+  LC +    +A 
Sbjct: 921  MVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDAL 980

Query: 294  ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            +L  EM      P + TY  L G++   G+  +  ++L+++ +    P+      +    
Sbjct: 981  DLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAFKQLENL---- 1036

Query: 354  CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
              E +++  ++ L+ +  RRC+  E T+ G+ +L
Sbjct: 1037 --ERRMEDAIRRLNMI--RRCR-KEVTFRGVELL 1065


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 214/465 (46%), Gaps = 32/465 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDA 133
           R  +L+  F  L  +V KG + D +  T LL  LC   +   A+  V+  M   G IPD 
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDV 163

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMED---YGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            SY  L+  LC +     A++L+  M D    G P + V+YN+++ G            F
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG------------F 211

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
               IQ  L   A               +  AM++L+ ++  G  P+ ++YN +L G C 
Sbjct: 212 FKEGIQTKLTAQA---------------MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ +EAI   + + S G EPNVV+Y+ L+  LC  GR  EA ++   M      P I T
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+      G+   + K+ D MV+   +P   +YN +I   C  GK+D   K L  M 
Sbjct: 317 YRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 376

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
               KP+  TY  L    C V ++ +A A+ + + +   S     Y  ++  L    +T 
Sbjct: 377 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 436

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +L   +TK G   +  TY+ ++ GLC   L +EAL +F  +   D + +   FN ++
Sbjct: 437 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 496

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             L K  R D + ++F      G +P+  TY+++ E +  Q  LE
Sbjct: 497 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 541



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 181/364 (49%), Gaps = 16/364 (4%)

Query: 192 DRLIQKG---LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           +R+ + G   + P   TY+ L+    +   +      L +++ KG + + +++  LL GL
Sbjct: 78  NRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGL 137

Query: 249 CKEGRTEEAIRF-FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL---AEMDGGDR 304
           C + RT +A+    R +   G  P+V SYN LL+ LC E R +EA ELL   A+  GG  
Sbjct: 138 CADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS 197

Query: 305 SPTIVTYNILIGSLAYHG--------KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            P +V+YN ++      G          D A++VL+ MVK    P   +YN I+   CS 
Sbjct: 198 PPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 257

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           G+    +  L +M     +PN  TY+ L   LC  G+  EA  I  S+  +        Y
Sbjct: 258 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 317

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           + ++   C++G+  ++ +L   M + G  PD  TY++LI G C+ G ++EA ++   M  
Sbjct: 318 RTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 377

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              KPD+  +  L+ G C+  R D +L +F+ M+  G  PN  TY I+++G+ H      
Sbjct: 378 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 437

Query: 536 SAEV 539
           + E+
Sbjct: 438 AKEL 441



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 208/479 (43%), Gaps = 53/479 (11%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG---IIPDASSYT 137
           DA    + ++ +G    +      L D+ + +    A+     M  +G   + P   +Y 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-LDRLIQ 196
            L+ C C+ G +      +  +   G+  + +T+  L++GLC     + ++   L R+ +
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLD---DIIAKGGKPNLVSYNVLLTGLCKEG- 252
            G +P+ F+Y+ LL+    E     A++LL    D    G  P++VSYN +L G  KEG 
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI 216

Query: 253 -------RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
                    ++A+     +   G  P+ ++YN +L   C  G+ +EA   L +M      
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 276

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P +VTY+ L+  L  +G++  A K+ D M K    P  A+Y  ++   C EG+V    K 
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336

Query: 366 LDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            D M     KP+  TYN L                                  I   C  
Sbjct: 337 FDLMVRIGVKPDIITYNTL----------------------------------IDGCCLA 362

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +A +LL  M   G  PD  TY +LI G C    +++AL +F  M      P++  +
Sbjct: 363 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 422

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           N +L GL  +RRT  + E++  + + G     +TY I++ G+   +   L+ E L+  Q
Sbjct: 423 NIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN---LTDEALRMFQ 478



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 196/441 (44%), Gaps = 58/441 (13%)

Query: 93  GHKPDVVQATNLLYDLCK--------ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           G  PDVV    +L    K        A  M KA++V+  MV +G++PD  +Y  +++  C
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 255

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
             G    A+  ++KM   G   N VTY+SL+  LC  G   ++ +  D + ++GL P+  
Sbjct: 256 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY  LL+   KE  V  + KL D ++  G KP++++YN L+ G C  G+ +EA +    +
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            S G +P++V+Y  L+   C   R ++A  L  EM     SP I+TYNI++  L +  +T
Sbjct: 376 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 435

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A ++   + K   +   ++YN I+  LC     D                        
Sbjct: 436 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD------------------------ 471

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                     EA  + Q+L           +  +I +L + G+  +A  L    +  G  
Sbjct: 472 ----------EALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 521

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TYS +   L  +G +EE  ++F+ MEE     D    N+                +
Sbjct: 522 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS----------------I 565

Query: 505 FQMMIEKGQMPNETTYTILVE 525
            + ++++G +    TY  +++
Sbjct: 566 VRKLLQRGDITRAGTYLFMID 586



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 188/384 (48%), Gaps = 1/384 (0%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           T+     ++ A   L  MV  G  PD +   ++L+  C + + K+AI  ++ M S G+ P
Sbjct: 218 TKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 277

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  +Y+ L+N LCK G    A ++ + M   G   +  TY +L++G C  G + +S +  
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF 337

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           D +++ G+ P+  TY+ L++       +  A KLL  +++ G KP++V+Y  L+ G C+ 
Sbjct: 338 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 397

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            R ++A+  F+++ S G  PN+++YNI+L+ L    R   A EL   +        + TY
Sbjct: 398 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 457

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           NI++  L  +  TD AL++   +     +    ++N +I  L   G++D           
Sbjct: 458 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 517

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
               P+  TY+ +A  L   G ++E   +  S+     S+       ++  L ++G   +
Sbjct: 518 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITR 577

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLI 454
           A   L+ + +  F+ ++ T S L+
Sbjct: 578 AGTYLFMIDEKHFSLEASTASFLL 601



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 22/310 (7%)

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL-----LAEMDGGDRSPTIV 309
           E+A   F +L  +G   ++   N   R+L    R   A  +     +A    G  +PT+ 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLN---RALADVARHSPAAAVSRYNRMARAGAGKVTPTVH 93

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQ 368
           TY ILIG     G+ D     L  +VK  FR  A ++ P++  LC++ +  D +   L +
Sbjct: 94  TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG-NKQNSSPQE----------FYK 416
           M    C P+  +YN L   LC   + QEA  ++  +  ++   SP +          F+K
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
             I +        +A ++L  M K G  PD  TY+S++ G C  G  +EA+     M   
Sbjct: 214 EGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 273

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
             +P+V  +++L+  LCK+ R+  + ++F  M ++G  P+  TY  L++G   +  + + 
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRV-IE 332

Query: 537 AEVLKELQLR 546
           +E L +L +R
Sbjct: 333 SEKLFDLMVR 342


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 217/420 (51%), Gaps = 10/420 (2%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           DA+ Y  L+  LCK     +A++L+  M   GY  + VTY +L+ GLC  G+L+ +   L
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
            ++   G  PN  TY+ L++   K R  H A++ +  ++  G +P+LV+YN L+ GLC  
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 252 GRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            R ++A    ++L    G  P+VV+YN  +  LC  G+ ++  E+L EMD G  SP +VT
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +  +I  L    + D A +V   M++    P + +Y+ ++  L    ++D V + L+ M 
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEA-FAIIQSLGNKQNSSPQEFYKY--VITSLCRKG 426
                    TY  L   L   G ++ A +A  Q++   +     E Y +   I +LCR G
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAM---EAGCVMEVYTHNAFIGALCRSG 305

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-YKPDVDNF 485
           K   A  +L  M + G  P+  +Y+ +I GLC  G +++A ++   M +    KPDV  F
Sbjct: 306 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 365

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKG-QMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           N L+ G CK+ R   + ++ + M  K   +P+  TY  +++G +    L+ +  +L+E+Q
Sbjct: 366 NTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 192/385 (49%), Gaps = 4/385 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M + G+   VV  T L+  LCK+  +  A  +++ M  +G  P+  +YT L++ LCK
Sbjct: 33  LHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCK 92

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS-LQFLDRLIQKGLVPNAF 204
                 A+Q V++M   G   + VTYNSL+ GLCM   ++ + L   + +I+ G +P+  
Sbjct: 93  ARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVV 152

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+  +    K   +   +++L+++   G  P++V++  +++GLCK  R ++A + F+ +
Sbjct: 153 TYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGM 212

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +G  P+ ++Y+I+L +L    R +   E+L  M          TY  LI +L   G  
Sbjct: 213 LERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDI 272

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-G 383
           + A    ++ ++        ++N  I  LC  GK  L    L  M      PN  +YN  
Sbjct: 273 ESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFV 332

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEM-TKY 441
           +  LC  G V +A+ + + + +     P   F+  +I+  C+ G+  QA QLL EM  K 
Sbjct: 333 IDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKN 392

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEA 466
              PD  TY+++I G    G +++A
Sbjct: 393 ICVPDVVTYNTMIDGQSKFGSLKQA 417



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 158/306 (51%), Gaps = 3/306 (0%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTY 138
           +DA   ++RM+  G +PD+V   +L++ LC AN+M  A  V+ E+M+ SG IPD  +Y  
Sbjct: 97  HDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNT 156

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            ++ LCK G +   ++++E+M+  G   + VT+ S++ GLC    ++ + Q    ++++G
Sbjct: 157 FISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERG 216

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
            VP++ TYS +L+   +   +    ++L+ ++  G      +Y  L+  L + G  E A 
Sbjct: 217 CVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESAS 276

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             +      G    V ++N  + +LC  G++  A  +L  M      P +++YN +I  L
Sbjct: 277 WAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGL 336

Query: 319 AYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-CKP 376
              G  D A K+  +M+  G  +P    +N +I+  C  G++    + L +M  +  C P
Sbjct: 337 CKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVP 396

Query: 377 NEGTYN 382
           +  TYN
Sbjct: 397 DVVTYN 402



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 134/259 (51%), Gaps = 2/259 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+     LE M   G  PDVV   +++  LCKAN++  A +V + M+  G +PD+ +Y+
Sbjct: 166 KLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYS 225

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ L +   +    +++E M   G+   + TY  L+  L   G++  +    ++ ++ 
Sbjct: 226 IMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEA 285

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G V   +T++  + A  +      A  +L  +I  G  PNL+SYN ++ GLCK G  ++A
Sbjct: 286 GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA 345

Query: 258 IRFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS-PTIVTYNILI 315
            +  R +   G  +P+V+ +N L+   C  GR  +A +LL EM   +   P +VTYN +I
Sbjct: 346 WKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMI 405

Query: 316 GSLAYHGKTDHALKVLDEM 334
              +  G    A  +L+EM
Sbjct: 406 DGQSKFGSLKQAKLLLEEM 424



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 123/227 (54%), Gaps = 2/227 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + ++++DAF   + M+ +G  PD +  + +L +L +AN++    +V+E MV SG    ++
Sbjct: 198 KANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSA 257

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ L + G++  A    E+  + G      T+N+ +  LC  G    +   L  +
Sbjct: 258 TYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGM 317

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG-GKPNLVSYNVLLTGLCKEGR 253
           I+ G +PN  +Y+F+++   K   V  A KL   ++  G  KP+++ +N L++G CK GR
Sbjct: 318 IESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGR 377

Query: 254 TEEAIRFFRDLPSKGF-EPNVVSYNILLRSLCMEGRWEEANELLAEM 299
             +A +  +++ +K    P+VV+YN ++      G  ++A  LL EM
Sbjct: 378 LSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 2/221 (0%)

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           M    FR  AA YN +IA LC   K    ++ L  M       +  TY  L   LC  G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +  A A++Q + +   +     Y  +I  LC+  + + A Q +  M + G  PD  TY+S
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 453 LIRGLCMEGLIEEA-LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           LI GLCM   +++A L +  +M E    PDV  +N  + GLCK+ + D  LE+ + M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           G  P+  T+  ++ G+   + ++ + +V K +  R  V +S
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS 221


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 228/465 (49%), Gaps = 7/465 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A+  L +M  +G KPDVV  T L+  LC A ++  A  V   M +S   PD  +Y 
Sbjct: 256 RLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYI 315

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++     G+     ++   ++  GY  N V+Y + V  LC +G ++++L   D + QK
Sbjct: 316 TLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK 375

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++P  ++Y+ L+    K    + A++L + +   G  PN  ++ + +    K G + +A
Sbjct: 376 GIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKA 435

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ +  + SKG  P+VV+ N +L  L   GR   A  +  E+     SP  +TY ++I  
Sbjct: 436 LKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKC 495

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +     D A+K+  EM++ R  P   + N +I  L   G+ +   K   ++     +P 
Sbjct: 496 CSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPT 555

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQL 434
           + TYN  LA L   GKV+E   +++  G   NS P     Y  V+  LC+ G+   A  +
Sbjct: 556 DCTYNTLLAGLGREGKVKEVMQLLE--GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDM 613

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           LY MT  G  PD  +Y++++ GL  EG ++EA  +F  M++    PD      +L    +
Sbjct: 614 LYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVR 672

Query: 495 SRRTDLSLE-VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           S     +L  V + +++     + ++   L+EGI  +D  E S E
Sbjct: 673 SGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIE 717



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 200/437 (45%), Gaps = 34/437 (7%)

Query: 87   ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
            E ++    K D     +L+  + K +  +K+I+  E + SSG++ D    + ++   CK 
Sbjct: 685  EYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKH 744

Query: 147  GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
                 A +LV+K E+ G    T +YN+L+ GL     ++ + +    + + G  P+ FTY
Sbjct: 745  KEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTY 804

Query: 207  SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
              +L+A  K   +   +K+ +++  KG K   V+YN +++GL K    +EAI  +  L S
Sbjct: 805  HLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS 864

Query: 267  KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            +GF P   +Y  LL  L  +G  E+A  L  EM      P    YNIL+      G T+ 
Sbjct: 865  EGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEK 924

Query: 327  ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
              ++ + MV+    P   SY  +I  LC++G+++  +    Q+     +P+  TYN    
Sbjct: 925  VCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYN---- 980

Query: 387  LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
                        +I  LG                   + G+  +A  L  +M K G  P+
Sbjct: 981  -----------LLIHGLG-------------------KSGRLEEALSLYNDMEKKGIAPN 1010

Query: 447  SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             YTY+SLI  L   G   EA +++  +    +KP+V  +NAL+ G   S   + +   + 
Sbjct: 1011 LYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYG 1070

Query: 507  MMIEKGQMPNETTYTIL 523
             MI  G  PN +TY  L
Sbjct: 1071 RMIVGGCRPNSSTYMQL 1087



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/522 (23%), Positives = 232/522 (44%), Gaps = 45/522 (8%)

Query: 65  KPGNNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQAT---NLLYDLCKAN-KMKKAI 118
           +PG+  +  H  R     D    LE  +S   +P VV  T   N + +L +A+ ++    
Sbjct: 62  RPGDAGNVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVA 121

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           +V ++M    I  +  ++  +   +  +G +  A   +  M++ G   N  TYN L+  L
Sbjct: 122 QVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFL 181

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
              G   +++     +   G+VP   TYS L+ A  K R     + LL ++ A+G +PN+
Sbjct: 182 VKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNV 241

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            SY + +  L + GR EEA R  R +  +G +P+VV+  +L++ LC  GR  +A ++  +
Sbjct: 242 YSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWK 301

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M   D+ P  VTY  L+      G +    ++ + +    +  +  SY   +  LC  G+
Sbjct: 302 MKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGR 361

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG------------- 404
           VD  +   D+M  +   P + +YN L +      +   A  +   +              
Sbjct: 362 VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVL 421

Query: 405 -----NKQNSSPQEFYKY-----------------VITSLCRKGKTYQAFQLLYEMTKYG 442
                 K   S +   +Y                 V+  L + G+   A ++ +E+   G
Sbjct: 422 FINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMG 481

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            +PD+ TY+ +I+        +EA++IF  M E    PDV   N+L+  L K+ R + + 
Sbjct: 482 ISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAW 541

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++F  + E    P + TY  L+ G+  + +++   EV++ L+
Sbjct: 542 KIFYELKEMNLEPTDCTYNTLLAGLGREGKVK---EVMQLLE 580



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 222/490 (45%), Gaps = 40/490 (8%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R+ K+ +    LE M S    P+++    +L  LCK  ++  A+ ++  M  +G +PD S
Sbjct: 568  REGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLS 627

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKME-----DYG-------------------------- 163
            SY  ++  L K+G +  A  +  +M+     DY                           
Sbjct: 628  SYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYI 687

Query: 164  -YPTNTV---TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
              P + V   + +SL+ G+       +S++F + +   GL+ +    S ++    K +  
Sbjct: 688  LQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEA 747

Query: 220  HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             AA +L+      G      SYN L+ GL  E   + A   F ++   G +P+  +Y+++
Sbjct: 748  LAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLI 807

Query: 280  LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
            L ++    R E+  ++  EM       T VTYN +I  L      D A+ +  +++   F
Sbjct: 808  LDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGF 867

Query: 340  RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEA 396
             P+  +Y P++  L  +G ++      D+M    C+PN   YN   +L G    G  ++ 
Sbjct: 868  SPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYN--ILLNGYRIAGDTEKV 925

Query: 397  FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
              + +S+  +  +   + Y  VI +LC  G+         ++T  G  PD  TY+ LI G
Sbjct: 926  CELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHG 985

Query: 457  LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            L   G +EEAL ++  ME+    P++  +N+L+L L K+ +   + ++++ ++ KG  PN
Sbjct: 986  LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPN 1045

Query: 517  ETTYTILVEG 526
              TY  L+ G
Sbjct: 1046 VFTYNALIRG 1055



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 228/537 (42%), Gaps = 79/537 (14%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A  + E M SKG  PDVV    +LY L K  ++  A +V   + + GI PD  +YT ++ 
Sbjct: 435 ALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIK 494

Query: 142 CLCKKGNVGYAMQLVEKM-----------------------------------EDYGYPT 166
           C  K  N   AM++  +M                                   ++     
Sbjct: 495 CCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEP 554

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
              TYN+L+ GL   G + + +Q L+ +      PN  TY+ +L+   K   V+ A+ +L
Sbjct: 555 TDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDML 614

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             +   G  P+L SYN ++ GL KEGR +EA   F  +  K   P+  +   +L S    
Sbjct: 615 YSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRS 673

Query: 287 GRWEEA-----------------------NELLAEMDGGDRS----PTIVTYNILIGSLA 319
           G  +EA                        E + + DG ++S      I +  +L+  L 
Sbjct: 674 GLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLF 733

Query: 320 YHGKTDHALK-----VLDEMVKGRFRP-----SAASYNPIIARLCSEGKVDLVVKCLDQM 369
                 H  K        E+VK +F          SYN +I  L  E  +D+  +   +M
Sbjct: 734 LSPIIRHFCKHKEALAAHELVK-KFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEM 792

Query: 370 FHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
               C P+E TY+   +L  +GK   +++   I + + NK   S    Y  +I+ L +  
Sbjct: 793 KRLGCDPDEFTYH--LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSK 850

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              +A  L Y++   GF+P   TY  L+ GL  +G IE+A  +F  M E   +P+   +N
Sbjct: 851 MLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYN 910

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            LL G   +  T+   E+F+ M+E+G  P+  +YT++++ +     L       K+L
Sbjct: 911 ILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 141/276 (51%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  ++ D     E M +KG+K   V    ++  L K+  + +AI +   ++S G  
Sbjct: 809  DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFS 868

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L++ L K GN+  A  L ++M + G   N   YN L+ G  + G+  +  + 
Sbjct: 869  PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             + ++++G+ P+  +Y+ +++    +  ++  +     +   G +P+L++YN+L+ GL K
Sbjct: 929  FESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 988

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             GR EEA+  + D+  KG  PN+ +YN L+  L   G+  EA ++  E+      P + T
Sbjct: 989  SGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFT 1048

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            YN LI   +  G  ++A      M+ G  RP++++Y
Sbjct: 1049 YNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 3/299 (1%)

Query: 83   FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            F +++R+   G  PD      +L  + K+ +++  +K+ E M + G      +Y  +++ 
Sbjct: 789  FSEMKRL---GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISG 845

Query: 143  LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            L K   +  A+ L  ++   G+     TY  L+ GL   GN+  +    D +++ G  PN
Sbjct: 846  LVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPN 905

Query: 203  AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
               Y+ LL             +L + ++ +G  P++ SY V++  LC +GR  + + +F+
Sbjct: 906  CAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFK 965

Query: 263  DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
             L   G EP++++YN+L+  L   GR EEA  L  +M+    +P + TYN LI  L   G
Sbjct: 966  QLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAG 1025

Query: 323  KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            K   A K+ +E++   ++P+  +YN +I      G  +       +M    C+PN  TY
Sbjct: 1026 KAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 135/324 (41%), Gaps = 3/324 (0%)

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           S N +L  +   GR  +  + F  +  +  + NV ++  +  ++ +EG    A   L  M
Sbjct: 103 SCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVM 162

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                     TYN LI  L   G    A+ V   M      P+  +Y+ ++         
Sbjct: 163 KEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDA 222

Query: 360 DLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           + VV  L +M  R  +PN  +Y   + +L   G+++EA+ I++ +  ++   P      V
Sbjct: 223 ETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM-EEEGCKPDVVTNTV 281

Query: 419 -ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            I  LC  G+   A  + ++M      PD  TY +L+      G      EI+  ++   
Sbjct: 282 LIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADG 341

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           Y  +V ++ A +  LC+  R D +L+VF  M +KG +P + +Y  L+ G    D    + 
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRAL 401

Query: 538 EVLKELQLRQVVSESAVERLVMQY 561
           E+   + +           L + Y
Sbjct: 402 ELFNHMNIHGPTPNGYTHVLFINY 425


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 209/434 (48%), Gaps = 1/434 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P +V    ++   CK   +  A     +MV +G++ D+ SY  L++ LC  G++  A+  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            + ME +G   + VTYN+L +G  +LG ++ + + + +++ +GL P+  TY+ L+    +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  A+KL  + +++G K N++ YN+LL+ LCK GR EEA+  F ++ +   EP+ + 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+IL+  LC EG  + A +L  +M    + P       ++  L  +G    A    D   
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           +         YN +I        +   ++   +M  R   P+  T+N L    C  G + 
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  +++ +  K        Y  ++ + C  G   + F  L+EM      P   TY+ LI
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           +GLC +  + E+L++   M      PD   +N ++   CK +    +L+++ MM+     
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 515 PNETTYTILVEGIA 528
           P + TY +L+  + 
Sbjct: 689 PTQVTYKVLINALC 702



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 213/463 (46%), Gaps = 36/463 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +++M+ +G  PD+V  T L+   C+   +++A+K+ +  +S G   +   Y  L++CLCK
Sbjct: 364 VQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCK 423

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC-------------------------- 179
            G +  A+ L ++ME      + + Y+ L+ GLC                          
Sbjct: 424 VGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFA 483

Query: 180 ----ML-----GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
               +L     GN++++  + D   +  L+ +   Y+ +++   +  G+  AM+L   +I
Sbjct: 484 QRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMI 543

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +G  P++V++N L+ G C+ G   EA +    +  KG  P+VV+Y  L+ + C  G  +
Sbjct: 544 ERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQ 603

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           E    L EM+     PT VTY +LI  L    K   +L++L+ M      P + +YN II
Sbjct: 604 EMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTII 663

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
              C   ++   ++  + M    C P + TY  L   LC  G +++   ++ S+ ++  +
Sbjct: 664 QCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNIT 723

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
             +  Y  +I + C KG+  +A     +M   GF      YS++I  LC  GLI EA   
Sbjct: 724 LKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYF 783

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           FV+M      PD +    +L    +        E   M+++ G
Sbjct: 784 FVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 208/447 (46%), Gaps = 16/447 (3%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGII-PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           L++ LC+ +K++ AI  +    S+ ++ P   S   +++  CK G +  A      M   
Sbjct: 243 LIHGLCEQSKLEDAISFLH--DSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKN 300

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   ++ +YN L+ GLC+ G+++++L F D + + G+ P+  TY+ L +       +  A
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            K++  ++ +G  P+LV+Y  L+ G C+ G  EEA++  ++  S+GF+ NV+ YN+LL  
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  GR EEA  L  EM+     P  + Y+ILI  L   G    A ++ ++M   R  P 
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFA 398
             +   ++  L   G +       D         +   YN    G   L G+    EA  
Sbjct: 481 HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIA---EAMQ 537

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +   +  +  +     +  +I   CR+G   +A ++L  +   G  P   TY++L+   C
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYC 597

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G ++E       ME     P    +  L+ GLC+  +   SL++ + M  KG +P+  
Sbjct: 598 EVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSV 657

Query: 519 TYTILVEGIAHQDELELSAEVLKELQL 545
           TY  +++            E+ K LQL
Sbjct: 658 TYNTIIQCFCK------GKEITKALQL 678



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/497 (23%), Positives = 223/497 (44%), Gaps = 9/497 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++DA   + +M     +  V    +LL+++   + M      +++   SG      
Sbjct: 182 RHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKV---SGAPQSEC 238

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L++ LC++  +  A+  +        P+  V+ N+++   C +G ++ +      +
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDSNKVVGPS-IVSINTIMSKFCKVGLIDVARSXFCLM 297

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ GL+ ++F+Y+ LL        +  A+   DD+   G +P++V+YN L  G    G  
Sbjct: 298 VKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLM 357

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A +  + +  +G  P++V+Y  L+   C  G  EEA +L  E         ++ YN+L
Sbjct: 358 SGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNML 417

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G+ + AL + DEM   R  P    Y+ +I  LC EG V    +  +QM  +R 
Sbjct: 418 LSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRK 477

Query: 375 KPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            P+   +   A+L G+   G + EA     +            Y  +I    R     +A
Sbjct: 478 FPHH--FAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            QL Y+M + G TP   T+++LI G C  G + EA ++  V+      P V  +  L+  
Sbjct: 536 MQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA 595

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            C+             M     +P   TYT+L++G+  Q+++  S ++L+ +  + ++ +
Sbjct: 596 YCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPD 655

Query: 552 SAVERLVMQYDFEGIEV 568
           S     ++Q   +G E+
Sbjct: 656 SVTYNTIIQCFCKGKEI 672



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 193/425 (45%), Gaps = 10/425 (2%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           S+G++ D  ++ Y      +   +  A+ ++ KM+D  +  +  TYNSL+  +    + +
Sbjct: 168 SNGLVWDMLAFAY-----SRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTD 219

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
                 + +   G   +  T S L+    ++  +  A+  L D     G P++VS N ++
Sbjct: 220 IMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG-PSIVSINTIM 278

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
           +  CK G  + A   F  +   G   +  SYNILL  LC+ G  +EA     +M+     
Sbjct: 279 SKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVE 338

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P +VTYN L       G    A KV+ +M+     P   +Y  +I   C  G ++  +K 
Sbjct: 339 PDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKL 398

Query: 366 LDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
             +   R  K N   YN L + LC VG+++EA  +   +   +       Y  +I  LC+
Sbjct: 399 RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCK 458

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +G   +A+QL  +M      P  +   +++ GL   G I EA   F      D   DV  
Sbjct: 459 EGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVL 518

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N ++ G  +      +++++  MIE+G  P+  T+  L+ G   + +L  + ++L+ ++
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIR 578

Query: 545 LRQVV 549
           L+ +V
Sbjct: 579 LKGLV 583



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 35/287 (12%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M+ +G  P VV    L+   C+   + +A K++E++   G++P   +YT L+N  C+ G
Sbjct: 541 KMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVG 600

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N+      + +ME        VTY  L++GLC    +++SLQ L+ +  KGL+P++ TY+
Sbjct: 601 NMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYN 660

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC------------------ 249
            +++   K + +  A++L + ++     P  V+Y VL+  LC                  
Sbjct: 661 TIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDR 720

Query: 250 -----------------KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
                             +G+  +A+ +F  + +KGF  ++  Y+ ++  LC  G   EA
Sbjct: 721 NITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEA 780

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
                 M     +P       ++ +    G      + L  +VK  F
Sbjct: 781 KYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 92/195 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R +K++++   LE M +KG  PD V    ++   CK  ++ KA+++  MM+     P   
Sbjct: 633 RQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQV 692

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LC  G++    ++V  +ED        TY ++++  C  G ++++L + +++
Sbjct: 693 TYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQM 752

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG V +   YS ++    K   +  A      ++++G  P+      +L    ++G  
Sbjct: 753 LAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNN 812

Query: 255 EEAIRFFRDLPSKGF 269
                F   +   GF
Sbjct: 813 SSVFEFLAMVVKSGF 827


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 232/476 (48%), Gaps = 7/476 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + ++A+  L +M   G KPDVV  T ++  LC A ++  A  V   M +S   PD  +Y 
Sbjct: 263 RFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYI 322

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++     G+    M++   M   GY  N V+Y ++V  LC +G L+++L   D + +K
Sbjct: 323 TLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEK 382

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P  ++Y+ L+    K      A++L + + A G  PN  ++ + +    K G++ +A
Sbjct: 383 GISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKA 442

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I+ +  + SKG  P+V + N +L SL   GR   A  +  E+     SP  +TY ++I  
Sbjct: 443 IQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKC 502

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +   K D A+    +MV+    P   + N +I  L   GK +   K   Q+   + +P 
Sbjct: 503 CSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPT 562

Query: 378 EGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            GTYN L  L G+   GKV+E   +++ + +  +      Y  V+  L + G+   A  +
Sbjct: 563 NGTYNTL--LSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGM 620

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           LY MT+ G TPD  +Y++++ GL  E   EEA  +F  M++    PD      +L    K
Sbjct: 621 LYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVK 679

Query: 495 SRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           +     +L   +  I K     +++++  L+EGI ++  +E S E  + +  R ++
Sbjct: 680 NGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGIL 735



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/543 (23%), Positives = 241/543 (44%), Gaps = 47/543 (8%)

Query: 46  ASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDA---FLQLERMVSKGHKPDVVQAT 102
           A  + +  P  +   +  R  G    T    H L  A      LE   +   +P  V  T
Sbjct: 49  AGCRQSAPPAPARVHERRRAAGAGTGTESVVHMLRSAPGPAEALELFTAAARQPTAVHTT 108

Query: 103 ---NLLYDLCKAN-KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
              N + +L +A+ ++    +V ++M    +  +  ++  + + +  +G +  A   +  
Sbjct: 109 ESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPV 168

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M + G   N  TYN L+  L   G   ++++    +++ G+ P+  TYS L+ +  K+R 
Sbjct: 169 MREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRD 228

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           V   + LL+++ A+G KPN+ SY + +  L +  R +EA +    +   G +P+VV++ +
Sbjct: 229 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTV 288

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           +++ LC  GR  +A ++  +M   D+ P  VTY  L+      G +   +++ + MV   
Sbjct: 289 VIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADG 348

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ---- 394
           +  +  SY  ++  LC  G++D  +   D+M  +   P + +YN L  + G  K      
Sbjct: 349 YNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSL--ISGFLKADMFDR 406

Query: 395 --EAFAIIQSLG---------------NKQNSSPQEFYKY-----------------VIT 420
             E F  + + G                K   S +   +Y                 V++
Sbjct: 407 ALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLS 466

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           SL R G+   A ++ YE+   G +PD+ TY+ +I+        +EA+  F  M E    P
Sbjct: 467 SLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVP 526

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           DV   N+L+  L K  + + + ++F  + E    P   TY  L+ G+  + +++    +L
Sbjct: 527 DVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLL 586

Query: 541 KEL 543
           +E+
Sbjct: 587 EEM 589



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 208/433 (48%), Gaps = 10/433 (2%)

Query: 114  MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
            ++K+I+  E + S GI+ +      L+  LCK      A QL  K +  G    T +YNS
Sbjct: 719  VEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNS 778

Query: 174  LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
            L+RGL     ++ +      + + G  P+ FTY+ +L+A  K   +   +++  ++  KG
Sbjct: 779  LIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKG 838

Query: 234  GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             +   V+YN +++GL K  R E+AI  + +L S+GF P   +Y  LL  L   G+  +A 
Sbjct: 839  YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAE 898

Query: 294  ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
             L  EM      P    YNIL+      G T++  ++ ++MV+    P   SY  +I  L
Sbjct: 899  NLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTL 958

Query: 354  CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSS 410
            C+ G+++  +    Q+     +P+   YN   ++ G+GK   ++EA  +   +  K    
Sbjct: 959  CTAGRLNDGLSYFRQLLELGLEPDLIIYN--LLIDGLGKSERIEEAVCLFNEMKKKGIVP 1016

Query: 411  PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
                Y  +I  L + GK  +A Q+  E+   G+ P+ +TY++LIRG  + G  + A   +
Sbjct: 1017 NLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY 1076

Query: 471  VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
              +        V    AL+ GL      +++  +F  M  +G  P++ TY ++++ I   
Sbjct: 1077 DCV-----AVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKS 1131

Query: 531  DELELSAEVLKEL 543
              +E   +V +E+
Sbjct: 1132 MRIEEMLKVQEEI 1144



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 211/460 (45%), Gaps = 7/460 (1%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++ ++N A   L  M  KG  PD+     ++Y L K  + ++A ++   M    + 
Sbjct: 606  DCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKILA 664

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD ++   ++    K G +  A+  V E +      T+  +++SL+ G+     + +S++
Sbjct: 665  PDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIE 724

Query: 190  FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            F + +  +G++ N F    L+    K +    A +L +     G      SYN L+ GL 
Sbjct: 725  FAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLV 784

Query: 250  KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
             E   + A   F ++   G  P+  +YN++L ++    R EE   + AEM       T V
Sbjct: 785  DENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYV 844

Query: 310  TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            TYN +I  L    + + A+ +   ++   F P+  +Y P++  L   GK+       ++M
Sbjct: 845  TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEM 904

Query: 370  FHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
                CKPN   YN   +L G    G  +    I + +  +  +   + Y  +I +LC  G
Sbjct: 905  LEYGCKPNCTIYN--ILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAG 962

Query: 427  KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
            +         ++ + G  PD   Y+ LI GL     IEEA+ +F  M++    P++  +N
Sbjct: 963  RLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYN 1022

Query: 487  ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            +L+L L K+ +   + ++++ ++ KG  PN  TY  L+ G
Sbjct: 1023 SLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRG 1062



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 227/508 (44%), Gaps = 36/508 (7%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K ++A      MV  G  PDV+   +L+  L K  K  +A K+   +    I P   +Y 
Sbjct: 508  KADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYN 567

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++ L ++G V   M L+E+M    +P N +TYN+++  L   G +N ++  L  + +K
Sbjct: 568  TLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEK 627

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKL---LDDIIAKGGK------PNLV--------- 239
            G  P+  +Y+ ++    KE     A ++   +  I+A          P+ V         
Sbjct: 628  GCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEAL 687

Query: 240  -----------------SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                             S++ L+ G+  +   E++I F  ++ S+G   N      L+R 
Sbjct: 688  HTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRH 747

Query: 283  LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            LC   +  EA++L  +  G   S    +YN LI  L      D A  +  EM +    P 
Sbjct: 748  LCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPD 807

Query: 343  AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQ 401
              +YN I+  +    +++ +++   +M  +  +    TYN + + L    ++++A  +  
Sbjct: 808  EFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYY 867

Query: 402  SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            +L ++  S     Y  ++  L + GK   A  L  EM +YG  P+   Y+ L+ G  + G
Sbjct: 868  NLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAG 927

Query: 462  LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
              E   +IF  M E    PD+ ++  L+  LC + R +  L  F+ ++E G  P+   Y 
Sbjct: 928  NTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYN 987

Query: 522  ILVEGIAHQDELELSAEVLKELQLRQVV 549
            +L++G+   + +E +  +  E++ + +V
Sbjct: 988  LLIDGLGKSERIEEAVCLFNEMKKKGIV 1015



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 6/368 (1%)

Query: 103  NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
            +L+  L   N +  A  +   M   G  PD  +Y  +++ + K   +   +++  +M   
Sbjct: 778  SLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRK 837

Query: 163  GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
            GY +  VTYN+++ GL     L Q++     L+ +G  P   TY  LL+   K   +  A
Sbjct: 838  GYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDA 897

Query: 223  MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
              L ++++  G KPN   YN+LL G    G TE   + F  +  +G  P++ SY +L+ +
Sbjct: 898  ENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDT 957

Query: 283  LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            LC  GR  +      ++      P ++ YN+LI  L    + + A+ + +EM K    P+
Sbjct: 958  LCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPN 1017

Query: 343  AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQ 401
              +YN +I  L   GK     +  +++  +  KPN  TYN L     V G    A+A   
Sbjct: 1018 LYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYD 1077

Query: 402  SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
             +     +        +I+ L  +     A  L  EM + G  PD +TY+ ++  +    
Sbjct: 1078 CV-----AVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSM 1132

Query: 462  LIEEALEI 469
             IEE L++
Sbjct: 1133 RIEEMLKV 1140



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 157/322 (48%), Gaps = 7/322 (2%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  ++ +       M  KG++   V    ++  L K+ ++++AI +   ++S G  
Sbjct: 816  DAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFS 875

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L++ L K G +  A  L  +M +YG   N   YN L+ G  + GN     Q 
Sbjct: 876  PTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQI 935

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++++++G+ P+  +Y+ L++       ++  +     ++  G +P+L+ YN+L+ GL K
Sbjct: 936  FEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGK 995

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              R EEA+  F ++  KG  PN+ +YN L+  L   G+  EA ++  E+      P + T
Sbjct: 996  SERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFT 1055

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
            YN LI   +  G TD+A    D +  G    +A     +I+ L  E  +++      +M 
Sbjct: 1056 YNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTA-----LISGLVDENLINIAEGLFAEMK 1110

Query: 371  HRRCKPNEGTYNGLAMLCGVGK 392
             R C P++ TYN   +L  +GK
Sbjct: 1111 RRGCGPDQFTYN--LILDAIGK 1130



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 3/280 (1%)

Query: 81   DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
            D F +++R+   G  PD      +L  + K+ ++++ ++V   M   G      +Y  ++
Sbjct: 794  DLFTEMKRL---GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTII 850

Query: 141  NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
            + L K   +  A+ L   +   G+     TY  L+ GL   G +  +    + +++ G  
Sbjct: 851  SGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCK 910

Query: 201  PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            PN   Y+ LL             ++ + ++ +G  P++ SY VL+  LC  GR  + + +
Sbjct: 911  PNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSY 970

Query: 261  FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            FR L   G EP+++ YN+L+  L    R EEA  L  EM      P + TYN LI  L  
Sbjct: 971  FRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGK 1030

Query: 321  HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
             GK   A ++ +E++   ++P+  +YN +I      G  D
Sbjct: 1031 AGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTD 1070



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R G   Q F L   M K     +  T++++  G+ ++G +  A     VM E     +  
Sbjct: 123 RVGDMAQVFDL---MQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGY 179

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +N L+  L KS     ++EV++ M+E G  P+  TY++L+     + +++    +L E+
Sbjct: 180 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEM 239

Query: 544 QLRQV 548
           + R V
Sbjct: 240 EARGV 244


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 224/468 (47%), Gaps = 8/468 (1%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P       LL+   K  K     +  + M+ +G  P   +Y  +++C+CK+G+V  A  L
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            E+M+  G   +TVTYNS++ G   +G L+ ++ F + +      P+  TY+ L+    K
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +   ++   ++   G KPN+VSY+ L+   CKEG  ++AI+F+ D+   G  PN  +
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+ + C  G   +A  L  EM        +VTY  LI  L    +   A ++  +M 
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
                P+ ASYN +I        +D  ++ L+++  R  KP+   Y      LC + K++
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            A  ++  +      +    Y  ++ +  + G   +   LL EM +        T+  LI
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584

Query: 455 RGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
            GLC   L+ +A++ F  +  ++  + +   F A++ GLCK  + + +  +F+ M++KG 
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +P+ T YT L++G   Q        VL+ L LR  ++E  ++  ++ Y
Sbjct: 645 VPDRTAYTSLMDGNFKQ------GNVLEALALRDKMAEIGMKLDLLAY 686



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 215/498 (43%), Gaps = 48/498 (9%)

Query: 65  KPGNNNDTRHRDHKL---NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM 121
           K  + N   HR  KL   +D     + M+  G +P V     ++  +CK   ++ A  + 
Sbjct: 226 KTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF 285

Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
           E M   G++PD  +Y  +++   K G +   +   E+M+D     + +TYN+L+   C  
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 345

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           G L   L+F   +   GL PN  +YS L++A  KE  +  A+K   D+   G  PN  +Y
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             L+   CK G   +A R   ++   G E NVV+Y  L+  LC   R +EA EL  +MD 
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVD 360
               P + +YN LI         D AL++L+E+ KGR  +P    Y   I  LCS  K++
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDLLLYGTFIWGLCSLEKIE 524

Query: 361 ------------------LVVKCLDQMFHRRCKPNEGTY--------------------- 381
                             L+   L   + +   P EG +                     
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584

Query: 382 NGLAMLCGVGKVQEAF-AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           +GL     V K  + F  I    G + N++    +  +I  LC+  +   A  L  +M +
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAA---IFTAMIDGLCKDNQVEAATTLFEQMVQ 641

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD   Y+SL+ G   +G + EAL +   M E   K D+  + +L+ GL    +   
Sbjct: 642 KGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQK 701

Query: 501 SLEVFQMMIEKGQMPNET 518
           +    + MI +G  P+E 
Sbjct: 702 ARSFLEEMIGEGIHPDEV 719



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 179/385 (46%), Gaps = 6/385 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G KP+VV  + L+   CK   M++AIK    M   G++P+  +YT L++  CK GN
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A +L  +M   G   N VTY +L+ GLC    + ++ +   ++   G++PN  +Y+ 
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K + +  A++LL+++  +G KP+L+ Y   + GLC   + E A     ++   G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + N + Y  L+ +    G   E   LL EM   D   T+VT+ +LI  L  +     A+
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597

Query: 329 KVLDEMVKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
              + +      + +AA +  +I  LC + +V+      +QM  +   P+   Y  L  +
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL--M 655

Query: 388 CG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
            G    G V EA A+   +           Y  ++  L    +  +A   L EM   G  
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEI 469
           PD     S+++     G I+EA+E+
Sbjct: 716 PDEVLCISVLKKHYELGCIDEAVEL 740



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 202/475 (42%), Gaps = 43/475 (9%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P    +  L + L   G +  A+Q   KM+ +     T + N L+     LG  +   +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           F   +I  G  P  FTY+ +++   KE  V AA  L +++  +G  P+ V+YN ++ G  
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K GR ++ + FF ++     EP+V++YN L+   C  G+     E   EM G    P +V
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +Y+ L+ +    G    A+K   +M +    P+  +Y  +I   C  G +    +  ++M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
                + N  TY  L   LC   +++EA   F  + + G   N +    Y  +I    + 
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS---YNALIHGFVKA 485

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE--------------------- 464
               +A +LL E+   G  PD   Y + I GLC    IE                     
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545

Query: 465 --------------EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
                         E L +   M+E D +  V  F  L+ GLCK++    +++ F  +  
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605

Query: 511 K-GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
             G   N   +T +++G+   +++E +  + +++  + +V +      +M  +F+
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 153/355 (43%), Gaps = 49/355 (13%)

Query: 49  QVTISPKDSVYTK---PNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLL 105
           +V + P +  YT     N K GN          L+DAF     M+  G + +VV  T L+
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGN----------LSDAFRLGNEMLQVGVEWNVVTYTALI 444

Query: 106 YDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYP 165
             LC A +MK+A ++   M ++G+IP+ +SY  L++   K  N+  A++L+ +++  G  
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            + + Y + + GLC L  +  +   ++ + + G+  N+  Y+ L++A +K       + L
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564

Query: 226 LDD------------------------IIAK------------GGKPNLVSYNVLLTGLC 249
           LD+                        +++K            G + N   +  ++ GLC
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K+ + E A   F  +  KG  P+  +Y  L+     +G   EA  L  +M        ++
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 684

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
            Y  L+  L++  +   A   L+EM+     P       ++ +    G +D  V+
Sbjct: 685 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 146/379 (38%), Gaps = 87/379 (22%)

Query: 257 AIRFFR-DLPSKGFEPNVVSYNIL-----------------------------------L 280
           A +FF+  +   GF+ +V SY I+                                    
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWST 184

Query: 281 RSLCME---------------GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           R++C+                G  EEA +  ++M      P   + N L+   A  GKTD
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
              +   +M+    RP+  +YN +I  +C EG V+      ++M  R   P+  TYN + 
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304

Query: 386 MLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              G VG++ +     + + +         Y  +I   C+ GK     +   EM   G  
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVME-------EYDYKPDVD-------------- 483
           P+  +YS+L+   C EG++++A++ +V M        EY Y   +D              
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424

Query: 484 --------------NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
                          + AL+ GLC + R   + E+F  M   G +PN  +Y  L+ G   
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484

Query: 530 QDELELSAEVLKELQLRQV 548
              ++ + E+L EL+ R +
Sbjct: 485 AKNMDRALELLNELKGRGI 503



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             F +L+  T+    P    + +L   L   G++EEA++ F  M+ +   P   + N LL
Sbjct: 176 DVFDVLWS-TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLL 234

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
               K  +TD     F+ MI  G  P   TY I+++ +  + ++E +  + +E++ R +V
Sbjct: 235 HRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV 294

Query: 550 SESA 553
            ++ 
Sbjct: 295 PDTV 298



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 35/155 (22%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D+++  A    E+MV KG                                   ++
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKG-----------------------------------LV 645

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD ++YT L++   K+GNV  A+ L +KM + G   + + Y SLV GL     L ++  F
Sbjct: 646 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 705

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
           L+ +I +G+ P+      +L+  Y+   +  A++L
Sbjct: 706 LEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 209/434 (48%), Gaps = 1/434 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P +V    ++   CK   +  A     +MV +G++ D+ SY  L++ LC  G++  A+  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            + ME +G   + VTYN+L +G  +LG ++ + + + +++ +GL P+  TY+ L+    +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +  A+KL  + +++G K N++ YN+LL+ LCK GR EEA+  F ++ +   EP+ + 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+IL+  LC EG  + A +L  +M    + P       ++  L  +G    A    D   
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           +         YN +I        +   ++   +M  R   P+  T+N L    C  G + 
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  +++ +  K        Y  ++ + C  G   + F  L+EM      P   TY+ LI
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           +GLC +  + E+L++   M      PD   +N ++   CK +    +L+++ MM+     
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 515 PNETTYTILVEGIA 528
           P + TY +L+  + 
Sbjct: 689 PTQVTYKVLINALC 702



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 213/463 (46%), Gaps = 36/463 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +++M+ +G  PD+V  T L+   C+   +++A+K+ +  +S G   +   Y  L++CLCK
Sbjct: 364 VQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCK 423

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC-------------------------- 179
            G +  A+ L ++ME      + + Y+ L+ GLC                          
Sbjct: 424 VGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFA 483

Query: 180 ----ML-----GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
               +L     GN++++  + D   +  L+ +   Y+ +++   +  G+  AM+L   +I
Sbjct: 484 QRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMI 543

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +G  P++V++N L+ G C+ G   EA +    +  KG  P+VV+Y  L+ + C  G  +
Sbjct: 544 ERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQ 603

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           E    L EM+     PT VTY +LI  L    K   +L++L+ M      P + +YN II
Sbjct: 604 EMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTII 663

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS 409
              C   ++   ++  + M    C P + TY  L   LC  G +++   ++ S+ ++  +
Sbjct: 664 QCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNIT 723

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
             +  Y  +I + C KG+  +A     +M   GF      YS++I  LC  GLI EA   
Sbjct: 724 LKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYF 783

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           FV+M      PD +    +L    +        E   M+++ G
Sbjct: 784 FVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 208/447 (46%), Gaps = 16/447 (3%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGII-PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           L++ LC+ +K++ AI  +    S+ ++ P   S   +++  CK G +  A      M   
Sbjct: 243 LIHGLCEQSKLEDAISFLH--DSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKN 300

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G   ++ +YN L+ GLC+ G+++++L F D + + G+ P+  TY+ L +       +  A
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            K++  ++ +G  P+LV+Y  L+ G C+ G  EEA++  ++  S+GF+ NV+ YN+LL  
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  GR EEA  L  EM+     P  + Y+ILI  L   G    A ++ ++M   R  P 
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFA 398
             +   ++  L   G +       D         +   YN    G   L G+    EA  
Sbjct: 481 HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIA---EAMQ 537

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +   +  +  +     +  +I   CR+G   +A ++L  +   G  P   TY++L+   C
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYC 597

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G ++E       ME     P    +  L+ GLC+  +   SL++ + M  KG +P+  
Sbjct: 598 EVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSV 657

Query: 519 TYTILVEGIAHQDELELSAEVLKELQL 545
           TY  +++            E+ K LQL
Sbjct: 658 TYNTIIQCFCK------GKEITKALQL 678



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/497 (23%), Positives = 224/497 (45%), Gaps = 9/497 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++DA   + +M     +  V    +LL+++   + M      +++   SG      
Sbjct: 182 RHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKV---SGAPQSEC 238

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + L++ LC++  +  A+  +        P+  V+ N+++   C +G ++ +  F   +
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDSNKVVGPS-IVSINTIMSKFCKVGLIDVARSFFCLM 297

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ GL+ ++F+Y+ LL        +  A+   DD+   G +P++V+YN L  G    G  
Sbjct: 298 VKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLM 357

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A +  + +  +G  P++V+Y  L+   C  G  EEA +L  E         ++ YN+L
Sbjct: 358 SGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNML 417

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G+ + AL + DEM   R  P    Y+ +I  LC EG V    +  +QM  +R 
Sbjct: 418 LSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRK 477

Query: 375 KPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            P+   +   A+L G+   G + EA     +            Y  +I    R     +A
Sbjct: 478 FPHH--FAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            QL Y+M + G TP   T+++LI G C  G + EA ++  V+      P V  +  L+  
Sbjct: 536 MQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA 595

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            C+             M     +P   TYT+L++G+  Q+++  S ++L+ +  + ++ +
Sbjct: 596 YCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPD 655

Query: 552 SAVERLVMQYDFEGIEV 568
           S     ++Q   +G E+
Sbjct: 656 SVTYNTIIQCFCKGKEI 672



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 194/425 (45%), Gaps = 10/425 (2%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           S+G++ D  ++ Y      +   +  A+ ++ KM+D  +  +  TYNSL+  +    + +
Sbjct: 168 SNGLVWDMLAFAY-----SRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTD 219

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
                 + +   G   +  T S L+    ++  +  A+  L D     G P++VS N ++
Sbjct: 220 IMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG-PSIVSINTIM 278

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
           +  CK G  + A  FF  +   G   +  SYNILL  LC+ G  +EA     +M+     
Sbjct: 279 SKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVE 338

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P +VTYN L       G    A KV+ +M+     P   +Y  +I   C  G ++  +K 
Sbjct: 339 PDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKL 398

Query: 366 LDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
             +   R  K N   YN L + LC VG+++EA  +   +   +       Y  +I  LC+
Sbjct: 399 RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCK 458

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +G   +A+QL  +M      P  +   +++ GL   G I EA   F      D   DV  
Sbjct: 459 EGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVL 518

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +N ++ G  +      +++++  MIE+G  P+  T+  L+ G   + +L  + ++L+ ++
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIR 578

Query: 545 LRQVV 549
           L+ +V
Sbjct: 579 LKGLV 583



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 35/287 (12%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M+ +G  P VV    L+   C+   + +A K++E++   G++P   +YT L+N  C+ G
Sbjct: 541 KMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVG 600

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N+      + +ME        VTY  L++GLC    +++SLQ L+ +  KGL+P++ TY+
Sbjct: 601 NMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYN 660

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC------------------ 249
            +++   K + +  A++L + ++     P  V+Y VL+  LC                  
Sbjct: 661 TIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDR 720

Query: 250 -----------------KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
                             +G+  +A+ +F  + +KGF  ++  Y+ ++  LC  G   EA
Sbjct: 721 NITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEA 780

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
                 M     +P       ++ +    G      + L  +VK  F
Sbjct: 781 KYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 93/195 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R +K++++   LE M +KG  PD V    ++   CK  ++ KA+++  MM+     P   
Sbjct: 633 RQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQV 692

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LC  G++    ++V  +ED       VTY ++++  C  G ++++L + +++
Sbjct: 693 TYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQM 752

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG V +   YS ++    K   +  A      ++++G  P+      +L    ++G  
Sbjct: 753 LAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNN 812

Query: 255 EEAIRFFRDLPSKGF 269
                F   +   GF
Sbjct: 813 SSVFEFLAMVVKSGF 827


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 230/504 (45%), Gaps = 43/504 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA  Q +R   +G  P ++    L+  L +  K+  A+ +   +   G+ P+  +Y   +
Sbjct: 178 DALFQTKR---RGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFI 234

Query: 141 NCLCKKGNVGYAMQLVEKMEDYG-----------------------------------YP 165
             LC+KGN   A+ +  +ME+ G                                   +P
Sbjct: 235 KALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWP 294

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            +T  Y +++RG C    L ++      ++ +G+ P+ + Y  L+ A  K   +  A+ L
Sbjct: 295 IDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVAL 354

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            +D+++ G K N V  + +L  LC+ G   E +  F++    G   + V YNI++ +LC 
Sbjct: 355 HNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCK 414

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            G+ EEA ELL EM G   S  +V Y  LI      GK   A  + +EM +    P   +
Sbjct: 415 LGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVT 474

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
           YN ++      G     ++ LD +  +  KPN  T+N +   LC  GKV+EA A + +L 
Sbjct: 475 YNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE 534

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           +K      E Y  ++   C+   T +A++L   ++K G      +   L+  LCMEG  +
Sbjct: 535 DK----CLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYD 590

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +AL +   M   D +P+   +  L+   C+      +  VF M++E+G  P+  TYT+++
Sbjct: 591 KALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMI 650

Query: 525 EGIAHQDELELSAEVLKELQLRQV 548
            G    + L  + ++  +++ R +
Sbjct: 651 NGYCRVNCLREARDIFNDMKERGI 674



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 238/531 (44%), Gaps = 50/531 (9%)

Query: 77  HKLNDAFLQLERMVSKGHKP-DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           HK +D   +  R +   + P D    T ++   C   K+K+A  V   MV+ GI PD   
Sbjct: 275 HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI 334

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L++  CK GN+  A+ L   M   G  TN V  +S+++ LC +G  ++ +       
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFR 394

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
             G+  +   Y+ +++A  K   V  A++LL+++  +    ++V Y  L+ G C +G+  
Sbjct: 395 DSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLV 454

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A   F ++  +G EP++V+YNIL+      G  +EA ELL  +      P   T+N +I
Sbjct: 455 DAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRII 514

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   GK   A   L+ +          +Y+ ++   C   K +   K   ++F R  K
Sbjct: 515 EGLCMAGKVKEAEAFLNTLED----KCLENYSAMVDGYC---KANFTRKAY-ELFSRLSK 566

Query: 376 -----PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
                  +  +  L+ LC  G+  +A  +++ +        Q  Y  +I + CR G   +
Sbjct: 567 QGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKR 626

Query: 431 AFQLLYEM-TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           A QL+++M  + G TPD  TY+ +I G C    + EA +IF  M+E   KPDV  +  +L
Sbjct: 627 A-QLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVL 685

Query: 490 LGLCK----------------SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH---- 529
            G  K                  + D S   +  M E G  P+   YT+L++        
Sbjct: 686 DGHSKVNLKMARSLQFSKGSEEEKMDAS-PFWSEMKEMGIKPDVVCYTVLIDSHCKTNNL 744

Query: 530 QDELELSAEVL-KELQ---------LRQVVSESAVER---LVMQYDFEGIE 567
           QD + L  E++ + LQ         L    S   ++R   LV +  F+GIE
Sbjct: 745 QDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIE 795



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 198/470 (42%), Gaps = 50/470 (10%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MVS G K + V  +++L  LC+     + +   +    SGI  D   Y  +V+ LCK G 
Sbjct: 358 MVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGK 417

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A++L+ +M+      + V Y +L+ G C+ G L  +    + + ++G+ P+  TY+ 
Sbjct: 418 VEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNI 477

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    +      A++LLD I  +G KPN  ++N ++ GLC  G+ +EA  F   L  K 
Sbjct: 478 LVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKC 537

Query: 269 FE-----------PNVV--SYNI------------------LLRSLCMEGRWEEANELLA 297
            E            N    +Y +                  LL SLCMEG +++A  LL 
Sbjct: 538 LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLE 597

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
            M   D  P  + Y  LIG+    G    A  V D +V+    P   +Y  +I   C   
Sbjct: 598 RMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVN 657

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
            +       + M  R  KP+  TY    +L G  KV    A  +SL   + S  ++    
Sbjct: 658 CLREARDIFNDMKERGIKPDVITYT--VVLDGHSKVNLKMA--RSLQFSKGSEEEKM--- 710

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
                        A     EM + G  PD   Y+ LI   C    +++A+ ++  M    
Sbjct: 711 ------------DASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARG 758

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +PD+  + ALL   C     D ++ +   M  KG  P+    ++L  GI
Sbjct: 759 LQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGI 808



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 170/382 (44%), Gaps = 1/382 (0%)

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           LV+    +G  ++++  L +  ++G VP+  + +FL+    +   +  A+ +   +   G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             PN  +Y + +  LC++G  EEA+  FR++   G  PN V+ +  +  LC   R +   
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           E L  +   +       Y  +I       K   A  V  +MV     P    Y  +I   
Sbjct: 283 EALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAY 342

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C  G +   V   + M     K N    +  L  LC +G   E     +   +      +
Sbjct: 343 CKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDE 402

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y  V+ +LC+ GK  +A +LL EM     + D   Y++LI G C++G + +A  +F  
Sbjct: 403 VLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEE 462

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M+E   +PD+  +N L+ G  ++     +LE+   +  +G  PN  T+  ++EG+    +
Sbjct: 463 MKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGK 522

Query: 533 LELSAEVLKELQLRQVVSESAV 554
           ++ +   L  L+ + + + SA+
Sbjct: 523 VKEAEAFLNTLEDKCLENYSAM 544



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 170/406 (41%), Gaps = 29/406 (7%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI---QKGLVPNAFTYSF 208
           A     ++++ G+  N  TY +L+R LC    L + LQ L   I   ++ ++    T  F
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRW-RLERKLQSLLSEIVGSKESVLGFDITALF 138

Query: 209 -----------------------LLEAAYKERGV-HAAMKLLDDIIAKGGKPNLVSYNVL 244
                                  +L  AY   G+   A+  L     +G  P+++S N L
Sbjct: 139 DVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFL 198

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           +  L + G+ + A+  +R L   G  PN  +Y I +++LC +G +EEA ++  EM+    
Sbjct: 199 MNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGV 258

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           +P  VT +  I  L  H ++D   + L  +    +     +Y  +I   CSE K+     
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAED 318

Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
               M +    P+   Y  L    C  G + +A A+   + +    +       ++  LC
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLC 378

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
             G   +      E    G   D   Y+ ++  LC  G +EEA+E+   M+      DV 
Sbjct: 379 EMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVV 438

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           ++  L+ G C   +   +  +F+ M E+G  P+  TY ILV G + 
Sbjct: 439 HYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSR 484



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 15/219 (6%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + A + LERM++   +P+ +    L+   C+   MK+A  V +M+V  GI PD  +YT +
Sbjct: 590 DKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMM 649

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG-NLNQSLQF-------- 190
           +N  C+   +  A  +   M++ G   + +TY  ++ G   +   + +SLQF        
Sbjct: 650 INGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEK 709

Query: 191 ------LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
                    + + G+ P+   Y+ L+++  K   +  A+ L D++IA+G +P++V+Y  L
Sbjct: 710 MDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTAL 769

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           L+  C  G  + AI    ++  KG EP+  + ++L R +
Sbjct: 770 LSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGI 808



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 15/196 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD  +  A L  + +V +G  PDV+  T ++   C+ N +++A  +   M   GI PD  
Sbjct: 620 RDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVI 679

Query: 135 SYTYLVNCLCK------------KGNVGYAMQ---LVEKMEDYGYPTNTVTYNSLVRGLC 179
           +YT +++   K            KG+    M       +M++ G   + V Y  L+   C
Sbjct: 680 TYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHC 739

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
              NL  ++   D +I +GL P+  TY+ LL +      +  A+ L++++  KG +P+  
Sbjct: 740 KTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSR 799

Query: 240 SYNVLLTGLCKEGRTE 255
           + +VL  G+ K  + +
Sbjct: 800 AMSVLHRGILKARKVQ 815



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 37/69 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  + + L DA    + M+++G +PD+V  T LL   C    M +AI ++  M   GI 
Sbjct: 736 DSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIE 795

Query: 131 PDASSYTYL 139
           PD+ + + L
Sbjct: 796 PDSRAMSVL 804


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 204/423 (48%), Gaps = 7/423 (1%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           MV  G+ P   ++  L+N LC +G V  A  LV KM   G   + VTY ++V G+C +G+
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
              +L  L ++ +  + P+   YS +++   K+     A  L  +++ KG  PN+ +YN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++ G C  GR  +A R  RD+  +   P+V+++N L+ +   EG+  EA +L  EM    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P  VTYN +I     H + D A  + D M      P   ++N II   C   +VD  +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           + L ++  R    N  TYN L    C V  +  A  + Q + +            ++   
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C   K  +A +L   +       D+  Y+ +I G+C    ++EA ++F  +  +  +PDV
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 483 DNFNALLLGLC-KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
             +N ++ G C KS  +D ++ +F  M + G  P+ +TY  L+ G     E++ S E++ 
Sbjct: 357 QTYNVMISGFCGKSAISDANV-LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 415

Query: 542 ELQ 544
           E++
Sbjct: 416 EMR 418



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 205/425 (48%), Gaps = 5/425 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV  G  P V+    L+  LC   ++ +A  ++  MV  G+  D  +Y  +VN +CK G+
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+ L+ KME+     + V Y++++  LC  G+ + +      +++KG+ PN FTY+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +++          A +LL D+I +   P+++++N L++   KEG+  EA +   ++  + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+ V+YN ++   C   R+++A  +   M     SP +VT+N +I       + D  +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           ++L E+ +     +  +YN +I   C    ++       +M      P+  T N L    
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C   K++EA  + + +   +       Y  +I  +C+  K  +A+ L   +  +G  PD 
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ +I G C +  I +A  +F  M++  ++PD   +N L+ G  K+   D S+E+   
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 508 MIEKG 512
           M   G
Sbjct: 417 MRSNG 421



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 144/286 (50%), Gaps = 5/286 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL +A    + M+ +   PD V   +++Y  CK N+   A  + ++M S    PD  
Sbjct: 162 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 217

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  +++  C+   V   MQL+ ++   G   NT TYN+L+ G C + NLN +      +
Sbjct: 218 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 277

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I  G+ P+  T + LL    +   +  A++L + I       + V+YN+++ G+CK  + 
Sbjct: 278 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 337

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F  LP  G EP+V +YN+++   C +    +AN L  +M      P   TYN L
Sbjct: 338 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 397

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           I      G+ D +++++ EM    F   A +   ++A L ++G++D
Sbjct: 398 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLD 442



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 149/325 (45%), Gaps = 32/325 (9%)

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P V+++N L+  LC+EGR  EA  L+ +M G      +VTY  ++  +   G T  A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
           L +L +M +   +P    Y+ II RLC +G          +M  +   PN  TYN +   
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C  G+  +A  +++ +  ++ +     +  +I++  ++GK ++A +L  EM      PD
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYD---YKPDVD-------------------- 483
           + TY+S+I G C     ++A  +F +M   D   +   +D                    
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 244

Query: 484 --------NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
                    +N L+ G C+    + + ++FQ MI  G  P+  T  IL+ G    ++LE 
Sbjct: 245 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 304

Query: 536 SAEVLKELQLRQVVSESAVERLVMQ 560
           + E+ + +Q+ ++  ++    +++ 
Sbjct: 305 ALELFEVIQMSKIDLDTVAYNIIIH 329



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 156/360 (43%), Gaps = 6/360 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D   +DA      M+ KG  P+V     ++   C   +   A +++  M+   I PD  
Sbjct: 92  KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 151

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++   K+G +  A +L ++M       +TVTYNS++ G C     + +    D +
Sbjct: 152 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 211

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                 P+  T++ +++   + + V   M+LL +I  +G   N  +YN L+ G C+    
Sbjct: 212 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 267

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F+++ S G  P+ ++ NILL   C   + EEA EL   +         V YNI+
Sbjct: 268 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 327

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  +    K D A  +   +      P   +YN +I+  C +  +        +M     
Sbjct: 328 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 387

Query: 375 KPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+  TYN L   C   G++ ++  +I  +      S   F   ++  L   G+  ++F 
Sbjct: 388 EPDNSTYNTLIRGCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVADLITDGRLDKSFS 446



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 2/185 (1%)

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           T+N L   LC  G+V EA A++  +  K        Y  ++  +C+ G T  A  LL +M
Sbjct: 12  TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 71

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            +    PD   YS++I  LC +G   +A  +F  M E    P+V  +N ++ G C   R 
Sbjct: 72  EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 131

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
             +  + + MIE+   P+  T+  L+     + +L   AE L +  L + +    V    
Sbjct: 132 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKL-FEAEKLCDEMLHRCIFPDTVTYNS 190

Query: 559 MQYDF 563
           M Y F
Sbjct: 191 MIYGF 195


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 227/477 (47%), Gaps = 6/477 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +LN+A   +  M ++G  P  +    +L    ++  +  A  V + M   G+ PD+SS+ 
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFK 244

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V    + G +  A + +  M   G+  +  T   ++  LC  G +N+++ +  ++I  
Sbjct: 245 LMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDL 304

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN   ++ L++   K+  +  A ++L++++  G KPN+ ++  L+ GLCK G TE+A
Sbjct: 305 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 364

Query: 258 IRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            R F  L  S  ++PNV +Y  ++   C E +   A  L + M      P + TY  LI 
Sbjct: 365 FRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 424

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G  D A ++++ M    FRP+  +YN +I  LC + +     + L++ F    + 
Sbjct: 425 GHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEA 484

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY  L    C    +++A A    +      +       +I + CR+ K  ++ +L 
Sbjct: 485 DGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 544

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             +   G  P   TY+S+I G C EG  + AL+ F  M+ +   PD   + +L+ GLCK 
Sbjct: 545 QLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 604

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL----KELQLRQV 548
              D + ++++ MI++G  P E T   L      +++   +  VL    K+L +R V
Sbjct: 605 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIRTV 661



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 207/409 (50%), Gaps = 4/409 (0%)

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A+ +V  M++ G   +++T N ++      G ++ +    D +  +G+ P++ ++
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             ++   +++  +  A + L  +I +G  P+  +  ++L+ LC+ G    AI +FR +  
Sbjct: 244 KLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            GF+PN++++  L+  LC +G  ++A E+L EM      P + T+  LI  L   G T+ 
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363

Query: 327 ALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           A ++  ++V+   ++P+  +Y  +I   C E K++       +M  +   PN  TY  L 
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              C  G    A+ ++ +L + +   P  + Y  VI SLC+K +  +A++LL +    G 
Sbjct: 424 NGHCKAGNFDRAYELM-NLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGL 482

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
             D  TY+ LI+  C +  I++AL  F  M +  ++ D+   N L+   C+ ++   S  
Sbjct: 483 EADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 542

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           +FQ+++  G +P + TYT ++ G   + + +L+ +    ++    V +S
Sbjct: 543 LFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDS 591



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 208/472 (44%), Gaps = 7/472 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD K+ +A   L  M+ +G  PD    T +L  LC+   + +AI     M+  G  P+  
Sbjct: 252 RDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLI 311

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++ LCKKG++  A +++E+M   G+  N  T+ +L+ GLC  G   ++ +   +L
Sbjct: 312 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 371

Query: 195 IQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++  +  PN  TY+ ++    KE  ++ A  L   +  +G  PN+ +Y  L+ G CK G 
Sbjct: 372 VRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGN 431

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A      +  +GF PN+ +YN ++ SLC + R  EA ELL +          VTY I
Sbjct: 432 FDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 491

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI           AL     M K  F       N +IA  C + K+    +    +    
Sbjct: 492 LIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 551

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
             P + TY  + +  C  G    A     ++  +    P  F Y  +I+ LC+K    +A
Sbjct: 552 LVPTKETYTSMISGYCKEGDFDLALKYFHNM-KRHGCVPDSFTYGSLISGLCKKSMVDEA 610

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   M   G +P   T  +L    C      ++    +V+E  D K  +     L+  
Sbjct: 611 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRN---DSASAMIVLEPLDKKLWIRTVRTLVRK 667

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           LC  ++  ++   FQ ++EK    +  T        +   +  L A++ + +
Sbjct: 668 LCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVADLTERI 719



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 218/462 (47%), Gaps = 3/462 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +L +  +  ++ +A+ ++  M + G+ P + +   ++    + G + YA  + ++M   G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              ++ ++  +V G    G + ++ ++L  +IQ+G +P+  T + +L A  +   V+ A+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                +I  G KPNL+++  L+ GLCK+G  ++A     ++   G++PNV ++  L+  L
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 284 CMEGRWEEANELLAEMDGGD-RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           C  G  E+A  L  ++   D   P + TY  +IG      K + A  +   M +    P+
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQ 401
             +Y  +I   C  G  D   + ++ M     +PN  TYN  +  LC   +  EA+ ++ 
Sbjct: 416 VNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLN 475

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
              +    +    Y  +I   C++    QA      M K GF  D    + LI   C + 
Sbjct: 476 KAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 535

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++E+  +F ++      P  + + +++ G CK    DL+L+ F  M   G +P+  TY 
Sbjct: 536 KMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYG 595

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            L+ G+  +  ++ + + L E  + + +S   V R+ + Y++
Sbjct: 596 SLISGLCKKSMVDEACK-LYEAMIDRGLSPPEVTRVTLAYEY 636



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 3/267 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  +  +A+  L +  S G + D V  T L+ + CK + +K+A+     M  +G  
Sbjct: 459 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFE 518

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D      L+   C++  +  + +L + +   G      TY S++ G C  G+ + +L++
Sbjct: 519 ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKY 578

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + + G VP++FTY  L+    K+  V  A KL + +I +G  P  V+   L    CK
Sbjct: 579 FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 638

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              +  A+     L  K +   + +   L+R LC E +   A     ++   D S   VT
Sbjct: 639 RNDSASAMIVLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVT 695

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKG 337
                 + +  GK +    + + + +G
Sbjct: 696 LAAFTTACSESGKNNLVADLTERISRG 722


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 211/440 (47%), Gaps = 2/440 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K NDA      M      P +V  + LL  + K NK +  I +   +   GI  D  S+T
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++C C+   +  A+  + KM   G+  + VT+ SLV G C +    +++  +D+++  
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN   Y+ ++++  ++  V+ A+ +L  +   G +P++V+YN L+T L   G    +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R   D+   G  P+V++++ L+     EG+  EA +   EM     +P IVTYN LI  
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  HG  D A KVL+ +V   F P+A +YN +I   C   +VD  +K L  M       +
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L    C  GK   A  ++  + +         +  ++  LC  GK  +A   L 
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLE 418

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           ++ K        TY+ +I+GLC    +E+A  +F  +      PDV  +  +++GL + R
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKR 478

Query: 497 RTDLSLEVF-QMMIEKGQMP 515
               + E++ +M  E G MP
Sbjct: 479 LWREAHELYRKMQKEDGLMP 498



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 1/367 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            N +L     + +   +P+   +S LL A  K     A + L   +   G   +L S+  
Sbjct: 60  FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C+  R   A+     +   GFEP++V++  L+   C   R+ EA  L+ ++ G  
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +V YN +I SL   G+ + AL VL  M K   RP   +YN +I RL   G   +  
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           + L  M      P+  T++ L  + G  G++ EA      +  +  +     Y  +I  L
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C  G   +A ++L  +   GF P++ TY++LI G C    +++ ++I  VM       D 
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +N L  G C++ +   + +V   M+  G  P+  T+ IL++G+    ++  +   L++
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419

Query: 543 LQLRQVV 549
           LQ  + V
Sbjct: 420 LQKSKTV 426



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 155/325 (47%), Gaps = 35/325 (10%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +L+ A   L +M+  G +P +V   +L+   C  N+  +A+ +++ +V  G  
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  +++ LC+KG V  A+ +++ M+  G   + VTYNSL+  L   G    S + 
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKE---------------RGVHA-------------- 221
           L  +++ G+ P+  T+S L++   KE               R V+               
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301

Query: 222 ------AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                 A K+L+ +++KG  PN V+YN L+ G CK  R ++ ++    +   G + +  +
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN L +  C  G++  A ++L  M      P + T+NIL+  L  HGK   AL  L+++ 
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421

Query: 336 KGRFRPSAASYNPIIARLCSEGKVD 360
           K +      +YN II  LC   KV+
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVE 446



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 123/233 (52%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ +L +A  Q   M+ +   P++V   +L+  LC    + +A KV+ ++VS G  
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A +Y  L+N  CK   V   M+++  M   G   +T TYN+L +G C  G  + + + 
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L R++  G+ P+ +T++ LL+       +  A+  L+D+        +++YN+++ GLCK
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
             + E+A   F  L  KG  P+V++Y  ++  L  +  W EA+EL  +M   D
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 213/436 (48%), Gaps = 37/436 (8%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E+MV+   +P ++  T L+  LCKA+K+++A  V E M+  G  PD  +Y+ L++ L K 
Sbjct: 130 EKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKA 189

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V  A +LV+ M   G P   V Y S+V GLC  G + ++++ +  + ++ L P   TY
Sbjct: 190 GRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTY 249

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           SF++        V  A  +++++  +   P+ +SY + +  L   GR EEA + F  +  
Sbjct: 250 SFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVE 309

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG +P++ +Y I++ + C EG    A  +L  MD     P    Y +++       + + 
Sbjct: 310 KGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEE 369

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR--CKPNEGTYNGL 384
           AL++   ++K    PS  +YN +I  LC   K+D  ++ L +M  R+   +P+  TY+  
Sbjct: 370 ALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS-- 427

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
            ++ G+GKV                                G   +AF LL EM   G  
Sbjct: 428 MIIHGLGKV--------------------------------GMEERAFDLLAEMIDNGVI 455

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD +TY+SLI+ L   G +  A+E+   M +    PD   +  L+  LC+S   D + ++
Sbjct: 456 PDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDL 514

Query: 505 FQMMIEKGQMPNETTY 520
            Q M+  G  PNE T+
Sbjct: 515 LQEMMRNGHTPNEFTF 530



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 219/468 (46%), Gaps = 11/468 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI-------IPDASSYTY 138
           L  M ++G   +      +L  LC    + KA+                   PD+ +YT 
Sbjct: 52  LREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTA 111

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V+ L K GN    ++  EKM         +TY  LV GLC    + ++    + +I+KG
Sbjct: 112 IVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKG 171

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+   YS L++   K   V  A KL+D +IA+G  P  V+Y  ++ GLCK GR +EA+
Sbjct: 172 HKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAV 231

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +  +++  +   P V +Y+ ++      G+ EEA  ++ EM   D +P  ++Y + I +L
Sbjct: 232 KTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEAL 291

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+ + A KV + MV+   +P   +Y  II   C EG +      L  M     KPN 
Sbjct: 292 YSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNR 351

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             Y  +        +++EA  + Q +           Y  VI +LC+  K  +A +LL E
Sbjct: 352 YIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLRE 411

Query: 438 MT--KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
           M   K    P   TYS +I GL   G+ E A ++   M +    PD   + +L+  L  +
Sbjct: 412 MQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGA 471

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +   ++E+ + M++ G  P++ TY  LV+ +   D ++ + ++L+E+
Sbjct: 472 GKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEM 518



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 187/382 (48%), Gaps = 4/382 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + HK+  A    E M+ KGHKPD++  ++L+  L KA ++ +A K++++M++ G  P A 
Sbjct: 153 KAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAV 212

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT +V  LCK G +  A++ +++M          TY+ +V G   +G + ++   ++ +
Sbjct: 213 AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEM 272

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +   P+  +Y+  +EA Y       A K+ + ++ KG KP++ +Y +++   CKEG  
Sbjct: 273 ADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSM 332

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A    R +     +PN   Y +++       R EEA EL   +      P+ VTYN +
Sbjct: 333 AAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTV 392

Query: 315 IGSLAYHGKTDHALKVLDEMV--KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I +L    K D AL++L EM   K    PS  +Y+ II  L   G  +     L +M   
Sbjct: 393 INALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDN 452

Query: 373 RCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              P+  TY  L   L G GKV  A  +++ +           Y  ++  LCR      A
Sbjct: 453 GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAA 511

Query: 432 FQLLYEMTKYGFTPDSYTYSSL 453
           + LL EM + G TP+ +T+ ++
Sbjct: 512 WDLLQEMMRNGHTPNEFTFKAV 533



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 220/446 (49%), Gaps = 32/446 (7%)

Query: 103 NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           +LL  L +  ++  A+   +  +S    P+ SS+  L+     + +      L+ +M+  
Sbjct: 2   SLLLALVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKAR 58

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G  +N  T+  ++  LC   +L++++ + +   ++                        A
Sbjct: 59  GITSNGATHGVILSALCARRDLDKAVSYFNSRTEE------------------------A 94

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            +L + I A    P+ V+Y  ++ GL K G  +  + ++  + +   EP +++Y +L+  
Sbjct: 95  CRLFEAIEA----PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDG 150

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC   + E A ++  EM      P I+ Y+ LI  L+  G+ D A K++D M+     P+
Sbjct: 151 LCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPT 210

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
           A +Y  I+A LC  G++   VK + +M  RR +P   TY+ +     G+GKV+EAFA+++
Sbjct: 211 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVME 270

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            + ++  +     Y   I +L   G+  +A ++   M + G  PD +TY  +I   C EG
Sbjct: 271 EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG 330

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +  A  +  +M++   KP+   +  ++ G  KS R + +LE++Q +++ G +P+  TY 
Sbjct: 331 SMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYN 390

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQ 547
            ++  +    +++ + E+L+E+Q R+
Sbjct: 391 TVINALCKLKKMDEALELLREMQRRK 416



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 159/381 (41%), Gaps = 52/381 (13%)

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           NSL+  L   G L+ +L F    I +   PN  +++ LL              LL ++ A
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKA 57

Query: 232 KGGKPNLVSYNVLLTGLCKE-----------GRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           +G   N  ++ V+L+ LC              RTEEA R F  + +    P+ V+Y  ++
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEA----PDSVTYTAIV 113

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             L   G ++   E   +M      PT++TY +L+  L    K + A  V +EM++   +
Sbjct: 114 DGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHK 173

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAII 400
           P   +Y+ +I  L   G+VD   K +D M  R   P    Y                   
Sbjct: 174 PDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTS----------------- 216

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
                            ++  LC+ G+  +A + + EM +    P   TYS ++ G    
Sbjct: 217 -----------------IVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGM 259

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G +EEA  +   M + D  PD  ++   +  L    R + + +VF+ M+EKG  P+  TY
Sbjct: 260 GKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTY 319

Query: 521 TILVEGIAHQDELELSAEVLK 541
            I+++    +  +  +  VL+
Sbjct: 320 GIIIDNFCKEGSMAAATHVLR 340



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 107/221 (48%), Gaps = 7/221 (3%)

Query: 30  PNLHSFSLN-KGFIR--VLASTQVTISPKDSVYTKPNRKPGNN-NDTRHRDHKLNDAFLQ 85
           P++H++ +    F +   +A+    +   D    KPNR       D   +  +L +A   
Sbjct: 314 PDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALEL 373

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV--SSGIIPDASSYTYLVNCL 143
            +R++  G  P  V    ++  LCK  KM +A++++  M      + P   +Y+ +++ L
Sbjct: 374 YQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL 433

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
            K G    A  L+ +M D G   +  TY SL++ L   G ++++++ L+ +++ G+ P+ 
Sbjct: 434 GKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDD 493

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
            TY  L++   +   V AA  LL +++  G  PN  ++  +
Sbjct: 494 HTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAV 533


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 192/399 (48%), Gaps = 34/399 (8%)

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
           S ++ D  S+  L+   C+ G +  +  L+ ++ ++G+  N V Y +L+ G C  G + +
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +      + + GLV N  TY+ L+   +K        ++ + +   G  PNL +YN ++ 
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
            LCK+GRT++A + F ++  +G   N+V+YN L+  LC E +  EAN+++ +M     +P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            ++TYN LI      GK   AL +  ++      PS  +YN +++  C +G      K +
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396

Query: 367 DQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            +M  R  KP++ TY  L                                  I +  R  
Sbjct: 397 KEMEERGIKPSKVTYTIL----------------------------------IDTFARSD 422

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              +A QL   M + G  PD +TYS LI G C++G + EA  +F  M E + +P+   +N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
            ++LG CK   +  +L++ + M EK   PN  +Y  ++E
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 196/380 (51%), Gaps = 1/380 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  +F  L  +   G  P+VV  T L+   CK  +++KA  +   M   G++ +  +YT
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N L K G      ++ EKM++ G   N  TYN ++  LC  G    + Q  D + ++
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+  N  TY+ L+    +E  ++ A K++D + + G  PNL++YN L+ G C  G+  +A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   RDL S+G  P++V+YNIL+   C +G    A +++ EM+     P+ VTY ILI +
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            A     + A+++   M +    P   +Y+ +I   C +G+++   +    M  + C+PN
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           E  YN + +  C  G    A  +++ +  K+ +     Y+Y+I  LC++ K+ +A +L+ 
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537

Query: 437 EMTKYGFTPDSYTYSSLIRG 456
           +M   G  P +   S + R 
Sbjct: 538 KMIDSGIDPSTSILSLISRA 557



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 209/426 (49%), Gaps = 2/426 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  ++N   +  ++  ++    +M D G+   +  +N L+  +    + NQ   F +   
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            K +V + +++  L++   +   +  +  LL ++   G  PN+V Y  L+ G CK+G  E
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A   F ++   G   N  +Y +L+  L   G  ++  E+  +M      P + TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G+T  A +V DEM +     +  +YN +I  LC E K++   K +DQM      
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN  TYN L    CGVGK+ +A ++ + L ++  S     Y  +++  CRKG T  A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + EM + G  P   TY+ LI        +E+A+++ + MEE    PDV  ++ L+ G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             + + +  +F+ M+EK   PNE  Y  ++ G   +     + ++LKE++ +++    A 
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515

Query: 555 ERLVMQ 560
            R +++
Sbjct: 516 YRYMIE 521



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 185/372 (49%), Gaps = 3/372 (0%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           DV     L+   C+A +++K+  ++  +   G  P+   YT L++  CKKG +  A  L 
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
            +M   G   N  TY  L+ GL   G   Q  +  +++ + G+ PN +TY+ ++    K+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
                A ++ D++  +G   N+V+YN L+ GLC+E +  EA +    + S G  PN+++Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N L+   C  G+  +A  L  ++     SP++VTYNIL+      G T  A K++ EM +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQE 395
              +PS  +Y  +I        ++  ++    M      P+  TY+ L    C  G++ E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 396 AFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           A  + +S+  K N  P E  Y  +I   C++G +Y+A +LL EM +    P+  +Y  +I
Sbjct: 462 ASRLFKSMVEK-NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520

Query: 455 RGLCMEGLIEEA 466
             LC E   +EA
Sbjct: 521 EVLCKERKSKEA 532



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 149/286 (52%), Gaps = 5/286 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +  DAF   + M  +G   ++V    L+  LC+  K+ +A KV++ M S GI P+  
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  C  G +G A+ L   ++  G   + VTYN LV G C  G+ + + + +  +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P+  TY+ L++   +   +  A++L   +   G  P++ +Y+VL+ G C +G+ 
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA R F+ +  K  EPN V YN ++   C EG    A +LL EM+  + +P + +Y  +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           I  L    K+  A +++++M+     PS +     I  L S  K D
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPSTS-----ILSLISRAKND 560



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 66/142 (46%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  R   +  A      M   G  PDV   + L++  C   +M +A ++ + MV     
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  ++   CK+G+   A++L+++ME+     N  +Y  ++  LC      ++ + 
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535

Query: 191 LDRLIQKGLVPNAFTYSFLLEA 212
           ++++I  G+ P+    S +  A
Sbjct: 536 VEKMIDSGIDPSTSILSLISRA 557


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 241/531 (45%), Gaps = 52/531 (9%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +++AF   + M   G  PDV    NLL  LCK   + +A + M  +V      D  +   
Sbjct: 410 VHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNA 469

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  +C  G++  A+ L EKM    +  +  TY  L+ G C  G +  ++  L  +++KG
Sbjct: 470 LLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKG 529

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEEA 257
           LVP+  TY+ LL+   KE  V AA  L  +II K G   + ++YN ++ G  K G+  + 
Sbjct: 530 LVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKV 589

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                D+      PN  SYNIL+     +G    +  L  +M      PT VTY +LI  
Sbjct: 590 EMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILG 649

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L+ HG  + A+K LD+MV     P   S++ +I     + ++   ++  + M      P+
Sbjct: 650 LSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPS 709

Query: 378 EGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             TY+  AM+ G+ +   +Q +  +++ +           Y  +I + CR G    AF+L
Sbjct: 710 SKTYS--AMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRL 767

Query: 435 LYEMTKYGFTP----DS-------------------------------YTYSSLIRGLCM 459
             EMT  G  P    DS                                T+++L+ GLC 
Sbjct: 768 KEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCK 827

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           E  I +AL +  +ME    K DV  +N L+ GLCK +    +LE+++ M  KG  PN TT
Sbjct: 828 EAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTT 887

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVS-----------ESAVERLVM 559
           YT L E I          ++L +++ R +V            E+A++RL M
Sbjct: 888 YTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPSYTDQCPEWRMENAMDRLNM 938



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 207/413 (50%), Gaps = 7/413 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  LVN   K+  V  A   +  M++ G+  +    N+++  L  +G       FL   +
Sbjct: 158 FDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGL 217

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            +    +  T + +L +   E  +  A  ++  +      PN+++YN +L    K+GR +
Sbjct: 218 VRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKM-KSCSLPNVITYNTILHWYVKKGRFK 276

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+    D+   G E +V +YNI++  LC   R   A  LL  M G + +P   TYN LI
Sbjct: 277 AAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLI 336

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                  K   A+ + +EM++   +PS A+Y  +I   C  G +D  ++ L +M     K
Sbjct: 337 KGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVK 396

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQL 434
           P+E TY+  AML   G V EAF++  ++  K   SP  + Y+ ++  LC+ G   QA + 
Sbjct: 397 PSEVTYS--AML--NGSVHEAFSVYDNM-EKYGCSPDVYTYRNLLRGLCKGGHLVQAKEF 451

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           +  +       D  T ++L+ G+C  G ++EAL++   M   ++ PD+  +  LL G C+
Sbjct: 452 MSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCR 511

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
             +   ++ + QMM+EKG +P+  TYT L++G+  + +++ ++ + +E+  ++
Sbjct: 512 KGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKE 564



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 227/515 (44%), Gaps = 55/515 (10%)

Query: 67  GNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS 126
           GN    +H  HK+    L           P+V+    +L+   K  + K A+ V+E M  
Sbjct: 239 GNLKGAKHMIHKMKSCSL-----------PNVITYNTILHWYVKKGRFKAAMCVLEDMEK 287

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
           +G+  D  +Y  +++ LCK     +A  L+++M       +  TYN+L++G      +  
Sbjct: 288 NGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMML 347

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           ++   + ++++GL P+  TY+ L++   +   +  A+++L ++   G KP+ V+Y+ +L 
Sbjct: 348 AIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAML- 406

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
                G   EA   + ++   G  P+V +Y  LLR LC  G   +A E ++ +     + 
Sbjct: 407 ----NGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAI 462

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
              T N L+  +  HG  D AL + ++MV   F P   +Y  +++  C +GK+   V  L
Sbjct: 463 DQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILL 522

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSL---------------------- 403
             M  +   P+  TY  L   L   G+V+ A  + Q +                      
Sbjct: 523 QMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLK 582

Query: 404 ---------------GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                           NK   +P   Y  ++    +KG   ++  L  +M + G  P + 
Sbjct: 583 AGKLHKVEMTIYDMNQNKVYPNPAS-YNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNV 641

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY  LI GL   G+IE A++    M      PD  +F+ L+    +  R   +L++F  M
Sbjct: 642 TYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCM 701

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                 P+  TY+ ++ G+  ++ L+ S +VL+++
Sbjct: 702 KWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDM 736



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 7/328 (2%)

Query: 36  SLNKGFIRV--LASTQVTISPKDSVYTKPNRKPGNNNDTRH---RDHKLNDAFLQLERMV 90
           S+  G+++   L   ++TI   +     PN  P + N   H   +   L+ +    + MV
Sbjct: 575 SMMNGYLKAGKLHKVEMTIYDMNQNKVYPN--PASYNILMHGHIKKGHLSRSIYLYKDMV 632

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVG 150
            KG KP  V    L+  L K   ++ A+K ++ MV  GI PD  S+  L+N   +K  + 
Sbjct: 633 RKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMS 692

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
            A+QL   M+      ++ TY++++ GL     L  S   L  +++ GL P    Y  L+
Sbjct: 693 DALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALI 752

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
            A  +   ++ A +L +++ A G  P  V+ + ++ GL K G+ EE I  F  +   G  
Sbjct: 753 NAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMV 812

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P + ++  L+  LC E +  +A  L + M+       +VTYN+LI  L        AL++
Sbjct: 813 PTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALEL 872

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGK 358
            +EM     RP+  +Y  +   +   G+
Sbjct: 873 YEEMKSKGLRPNVTTYTTLTEAIYGTGR 900


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 225/469 (47%), Gaps = 1/469 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+ +A   L RM  KG  PDVV  T ++   C   +++K +++++ M   G+ P+  
Sbjct: 122 RLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLY 181

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ ++  LCK G V    +++ +M   G   + V Y +L+ G C LGN   + +    +
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM 241

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + +VP++  +S L+        V  A KL +++I KG +P+ V+Y  L+ G CK G  
Sbjct: 242 EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEM 301

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      +   G  PNVV+Y  L   LC  G  + ANELL EM        I TYN +
Sbjct: 302 KKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTI 361

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G    A+K+++EM +    P   +Y  ++      G++    + L +M  R  
Sbjct: 362 VNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGL 421

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P   T+N L   LC  GK+++   +++ +  K        Y  ++   C +     + +
Sbjct: 422 QPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTE 481

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M   G  PDS TY+ LI+G C    ++EA  +   M E  +     ++NAL+ G  
Sbjct: 482 IYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFF 541

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           K ++   + ++F+ M  +G + +   Y + V+    +  +E + E+  E
Sbjct: 542 KRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE 590



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 236/462 (51%), Gaps = 1/462 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+  L +  K+++A  ++  M   G IPD  SYT +++  C  G +   +QLV++M+  G
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              N  TY+S++  LC  G + +  + L  ++++G+ P+   Y+ L++   K     AA 
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAY 235

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           KL  ++ A+   P+ ++++ L+ GL   G+  EA + F ++  KGFEP+ V+Y  L+   
Sbjct: 236 KLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGY 295

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C  G  ++A  L  +M     +P +VTY  L   L   G+ D A ++L EM +   + + 
Sbjct: 296 CKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI 355

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
           ++YN I+  LC  G +   VK +++M      P+  TY  L       G++ +A  +++ 
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLRE 415

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           + ++        +  ++  LC  GK     +LL  M + G  P++ TY+S+++  C+   
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +  + EI+  M      PD + +N L+ G CK+R    +  + + M+EK      ++Y  
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNA 535

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           L++G   + +L  + ++ +E++   +V+ + +  L +  ++E
Sbjct: 536 LIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYE 577



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 210/426 (49%), Gaps = 4/426 (0%)

Query: 105 LYDLCKANK---MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           LY  C ++K   +   +KV       G+  +  SY  L+N L + G +  A  L+ +ME 
Sbjct: 79  LYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEF 138

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   + V+Y +++ G C +G L + +Q +  +  KGL PN +TYS ++    K   V  
Sbjct: 139 KGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVE 198

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
             K+L +++ +G  P+ V Y  L+ G CK G T+ A + F ++ ++   P+ ++++ L+ 
Sbjct: 199 GEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALIC 258

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            L   G+  EA++L  EM      P  VTY  LI      G+   A  + ++MV+    P
Sbjct: 259 GLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTP 318

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
           +  +Y  +   LC  G++D   + L +M  +  + N  TYN +   LC  G + +A  ++
Sbjct: 319 NVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLM 378

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + +           Y  ++ +  + G+  +A +LL EM   G  P   T++ L+ GLCM 
Sbjct: 379 EEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMS 438

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G +E+   +   M E    P+   +N+++   C      +S E+++ M  +G +P+  TY
Sbjct: 439 GKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTY 498

Query: 521 TILVEG 526
            IL++G
Sbjct: 499 NILIKG 504



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 208/474 (43%), Gaps = 74/474 (15%)

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI--------------- 195
           +  +L+   +D+G  ++   ++   + L   G LN++ +F D+L+               
Sbjct: 24  FVERLIYTYKDWG--SDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYL 81

Query: 196 ---------------------QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
                                Q G+  N  +Y+ L+ + ++   +  A  LL  +  KG 
Sbjct: 82  TCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGC 141

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE--- 291
            P++VSY  ++ G C  G  ++ ++  +++  KG +PN+ +Y+ ++  LC  G+  E   
Sbjct: 142 IPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEK 201

Query: 292 --------------------------------ANELLAEMDGGDRSPTIVTYNILIGSLA 319
                                           A +L +EM+  +  P  + ++ LI  L+
Sbjct: 202 VLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLS 261

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             GK   A K+ +EM+K  F P   +Y  +I   C  G++       +QM      PN  
Sbjct: 262 GSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVV 321

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TY  LA  LC  G++  A  ++  +  K        Y  ++  LC+ G   QA +L+ EM
Sbjct: 322 TYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEM 381

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            + G  PD+ TY++L+      G + +A E+   M +   +P V  FN L+ GLC S + 
Sbjct: 382 KEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKL 441

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           +    + + M+EKG MPN  TY  +++    ++ + +S E+ + +  + VV +S
Sbjct: 442 EDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDS 495



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 7/300 (2%)

Query: 37  LNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKP 96
           + K F       Q+ ++P    YT          D   +  +L+ A   L  M  KG + 
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALA-------DGLCKSGELDTANELLHEMCRKGLQL 353

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           ++     ++  LCKA  + +A+K+ME M  +G+ PD  +YT L++   K G +  A +L+
Sbjct: 354 NISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELL 413

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
            +M D G     VT+N L+ GLCM G L    + L  +++KG++PNA TY+ +++     
Sbjct: 414 REMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIR 473

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
             +  + ++   + A+G  P+  +YN+L+ G CK    +EA    +++  K F     SY
Sbjct: 474 NNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSY 533

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N L++      +  EA +L  EM       +   YN+ +      G  +  L++ DE ++
Sbjct: 534 NALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIE 593



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 144/295 (48%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  AF    +MV  G  P+VV  T L   LCK+ ++  A +++  M   G+  + S+Y 
Sbjct: 300 EMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYN 359

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +VN LCK GN+  A++L+E+M++ G   +T+TY +L+      G + ++ + L  ++ +
Sbjct: 360 TIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDR 419

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P   T++ L+        +    +LL  ++ KG  PN  +YN ++   C       +
Sbjct: 420 GLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIS 479

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              +R + ++G  P+  +YNIL++  C     +EA  L  EM     + T  +YN LI  
Sbjct: 480 TEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKG 539

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
                K   A ++ +EM +     SA  YN  +     EG ++  ++  D+   +
Sbjct: 540 FFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 52/115 (45%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M ++G  PD      L+   CKA  MK+A  + + MV       ASSY  L+    K+  
Sbjct: 486 MCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKK 545

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           +  A QL E+M   G   +   YN  V      GN+  +L+  D  I+K L+  A
Sbjct: 546 LLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLLDKA 600



 Score = 39.3 bits (90), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 57/124 (45%)

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
             ++  E  + G   ++ +Y+ L+  L   G I EA  + + ME     PDV ++  ++ 
Sbjct: 94  VLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIID 153

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           G C        +++ + M  KG  PN  TY+ ++  +    ++    +VL+E+  R V  
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP 213

Query: 551 ESAV 554
           +  +
Sbjct: 214 DHVI 217


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 244/522 (46%), Gaps = 33/522 (6%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK----VMEMMVSSG 128
           R R   L   F+ + +   K H P+  +A +L + +    + K+ +K    V+ ++V  G
Sbjct: 89  RERRVFLEKNFIVMFKAYGKAHLPE--KAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEG 146

Query: 129 II-------------------PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +                    P+A ++  ++  +C+ G V  A+++  ++       +  
Sbjct: 147 LFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNY 206

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TY++L+ GLC    +++++  LD +  +G  PN   ++ L+ A  K+  +  A KL+D++
Sbjct: 207 TYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNM 266

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
             KG  PN V+YN L+ GLC +G+ E+A+     + S    PN V++  L+    M+GR 
Sbjct: 267 FLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRA 326

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            +   +L  ++          Y+ LI  L   GK + A+++  EMV     P+   Y+ +
Sbjct: 327 SDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSAL 386

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I  LC EGK+D     L +M ++   PN  TY+ L       G   +A  + + + N   
Sbjct: 387 IDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNC 446

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
              +  Y  +I  LC+ GK  +A  +  +M   G   D   YSS+I G C   L+E+ L+
Sbjct: 447 IHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLK 506

Query: 469 IF--VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           +F  ++ +    +PDV  +N LL   C  +    ++++  +M+++G  P+  T  I ++ 
Sbjct: 507 LFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKT 566

Query: 527 IAH-----QDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
           +       QD  E   E++  L  RQ    ++    VM + F
Sbjct: 567 LRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKF 608



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 218/462 (47%), Gaps = 35/462 (7%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD    + L++ LCK  ++ +A+ +++ M   G  P+  ++  L++ LCKKG++G A +L
Sbjct: 203 PDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKL 262

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           V+ M   G   N VTYN+LV GLC+ G L +++  L++++    VPN  T+  L+     
Sbjct: 263 VDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVM 322

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +       ++L  + A+G + N   Y+ L++GLCKEG+  +A+  ++++  KG  PN + 
Sbjct: 323 QGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIV 382

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ L+  LC EG+ +EA   L+EM      P   TY+ L+      G +  A+ V  EM 
Sbjct: 383 YSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMA 442

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
                 +   Y+ +I  LC +GK    +    QM  R  K +   Y+ +    C    V+
Sbjct: 443 NNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVE 502

Query: 395 EAFAII-QSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +   +  Q L       P    Y  ++ + C +   ++A  +L  M   G  PD  T   
Sbjct: 503 QGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT--- 559

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN---FNALLLGLCKSRRTDLSLEVFQMMI 509
                          +IF+     +  P  D     + L++ L K +RT  + ++ ++M+
Sbjct: 560 --------------CDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMM 605

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            K  +P  +T+ ++V+            +V K   +R+ +SE
Sbjct: 606 HKFLLPKASTWAMVVQ------------QVCKPKNVRKAISE 635



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 165/335 (49%), Gaps = 39/335 (11%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDL---PSKGFEPNVVSYNILLRSLCMEGRWEE 291
           K  + S+N +L  + +EG    A+ F+  +    S    PN +++N++++++C  G  ++
Sbjct: 129 KQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDK 188

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM-VKGRFRPSAASYNPII 350
           A E+  E+   + +P   TY+ L+  L    + D A+ +LDEM V+G F P+  ++N +I
Sbjct: 189 AIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTF-PNLVAFNVLI 247

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS 410
           + LC +G +    K +D MF + C PNE TYN L                          
Sbjct: 248 SALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNAL-------------------------- 281

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
                   +  LC KGK  +A  LL +M      P+  T+ +LI G  M+G   +   + 
Sbjct: 282 --------VHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVL 333

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
           V +E   ++ +   +++L+ GLCK  + + ++E+++ M+ KG  PN   Y+ L++G+  +
Sbjct: 334 VSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCRE 393

Query: 531 DELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
            +L+ +   L E++ +  +  S     +M+  FE 
Sbjct: 394 GKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEA 428


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 214/430 (49%), Gaps = 9/430 (2%)

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
           G+ PD    T LV  LC     G A +++  +   G   +  + N+L+  L    ++ + 
Sbjct: 241 GVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRM 300

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG------KPNLVSY 241
            + L  + ++ + P+  T+  L+    K R +  A+++ D +  KGG      +P++V +
Sbjct: 301 NELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLF 360

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGF-EPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           N L+ GLCK G+ E+ +    ++       PN V+YN L+      G ++ A+EL  +M+
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN 420

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P ++T N L+  L  HG+   A++  +EM     + +AA+Y  +I+  C    ++
Sbjct: 421 EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNIN 480

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
             ++C ++M    C P+   Y  L + LC  G++ +A  ++  L     S  +  Y  +I
Sbjct: 481 RAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLI 540

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
           +  C+K K  + ++LL EM + G  PD+ TY++LI  L   G    A ++   M +   +
Sbjct: 541 SGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLR 600

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAE 538
           P V  + A++   C  +  D  +++F  M    ++ PN   Y IL++ +   ++++ +  
Sbjct: 601 PSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAIS 660

Query: 539 VLKELQLRQV 548
           +++++++++V
Sbjct: 661 LMEDMKVKRV 670



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 198/403 (49%), Gaps = 10/403 (2%)

Query: 78  KLNDAFLQLERMVSKGH------KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI-I 130
           ++++A    +R+  KG       +PDVV    L+  LCK  K +  + ++E M    I  
Sbjct: 331 RIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINR 390

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y  L++   K GN   A +L  +M + G   N +T N+LV GLC  G ++++++F
Sbjct: 391 PNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEF 450

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +  KGL  NA TY+ L+ A      ++ AM+  +++++ G  P+ V Y  L++GLC 
Sbjct: 451 FNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCI 510

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  +A      L   GF  +   YN+L+   C + + E   ELL EM+     P  +T
Sbjct: 511 AGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTIT 570

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  L   G    A KV+++M+K   RPS  +Y  II   CS+  VD  +K   +M 
Sbjct: 571 YNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMC 630

Query: 371 H-RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
              +  PN   YN L   LC    V  A ++++ +  K+       Y  ++  +  K   
Sbjct: 631 STSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKML 690

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           ++AF+L+  M +    PD  T   L   L   G IE+ L+ FV
Sbjct: 691 HKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK-LKHFV 732



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 211/468 (45%), Gaps = 9/468 (1%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D K   A+  L  ++  G   D      LL  L +   +K+  +++  M    I P   +
Sbjct: 259 DQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVT 318

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMED------YGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +  LVN LCK   +  A+Q+ +++         G   + V +N+L+ GLC +G     L 
Sbjct: 319 FGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLS 378

Query: 190 FLDRLIQKGL-VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
            L+ +    +  PN  TY+ L++  +K      A +L   +  +G +PN+++ N L+ GL
Sbjct: 379 LLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGL 438

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CK GR   A+ FF ++  KG + N  +Y  L+ + C       A +   EM     SP  
Sbjct: 439 CKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDA 498

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           V Y  LI  L   G+ + A  V+ ++    F    + YN +I+  C + K++ V + L +
Sbjct: 499 VVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTE 558

Query: 369 MFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M     KP+  TYN L    G  G    A  +++ +  +        Y  +I + C K  
Sbjct: 559 MEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKN 618

Query: 428 TYQAFQLLYEM-TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
             +  ++  EM +     P++  Y+ LI  LC    ++ A+ +   M+    +P+   +N
Sbjct: 619 VDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYN 678

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           A+L G+   +    + E+   M+E+   P+  T  +L E ++   E+E
Sbjct: 679 AILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIE 726



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 220/478 (46%), Gaps = 18/478 (3%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM--VSSGIIPDASSY 136
           +ND+ L   ++      P +     LL  L K+ +   A+ V++ M   +SG    + + 
Sbjct: 157 VNDSLLLFNQLDPSSKSPQLCHG--LLRVLLKSGRAGDALHVLDEMPQANSGF---SVTG 211

Query: 137 TYLVNCLCKKGNV---GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             +   L + G     G  + LV K+ + G   +      LV  LC       + + L  
Sbjct: 212 EIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHC 271

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ G   +A + + LL    + R +    +LL ++  +  +P++V++ +L+  LCK  R
Sbjct: 272 VMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARR 331

Query: 254 TEEAIRFFRDLPSKG------FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD-RSP 306
            +EA++ F  L  KG       EP+VV +N L+  LC  G+ E+   LL EM  G+   P
Sbjct: 332 IDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRP 391

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
             VTYN LI      G  D A ++  +M +   +P+  + N ++  LC  G+V   V+  
Sbjct: 392 NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFF 451

Query: 367 DQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
           ++M  +  K N  TY  L +  CGV  +  A    + + +   S     Y  +I+ LC  
Sbjct: 452 NEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIA 511

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           G+   A  ++ ++   GF+ D   Y+ LI G C +  +E   E+   MEE   KPD   +
Sbjct: 512 GRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITY 571

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           N L+  L K+     + +V + MI++G  P+  TY  ++     +  ++   ++  E+
Sbjct: 572 NTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEM 629



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 184/433 (42%), Gaps = 45/433 (10%)

Query: 139 LVNCLCKKGNVGYAMQLVEKM--EDYGYP-TNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           L+  L K G  G A+ ++++M   + G+  T  + +  LVR      +  + +  + +L 
Sbjct: 180 LLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPD-GEVVGLVAKLG 238

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++G+ P+ F  + L+     ++    A ++L  ++  GG  +  S N LLT L +    +
Sbjct: 239 ERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIK 298

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS------PTIV 309
                  ++  +   P+VV++ IL+  LC   R +EA ++   + G   S      P +V
Sbjct: 299 RMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVV 358

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRF-RPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            +N LI  L   GK +  L +L+EM  G   RP+  +YN +I      G  D   +   Q
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
           M     +PN  T N L                                  +  LC+ G+ 
Sbjct: 419 MNEEGVQPNVITLNTL----------------------------------VDGLCKHGRV 444

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
           ++A +   EM   G   ++ TY++LI   C    I  A++ F  M      PD   + +L
Sbjct: 445 HRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSL 504

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + GLC + R + +  V   +   G   + + Y +L+ G   + +LE   E+L E++   V
Sbjct: 505 ISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGV 564

Query: 549 VSESAVERLVMQY 561
             ++     ++ Y
Sbjct: 565 KPDTITYNTLISY 577


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 232/506 (45%), Gaps = 41/506 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + HKL +AF  +E M     +P     T L+  L  AN+    + +   M   G   +  
Sbjct: 180 KSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVH 239

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +T LV    ++G +  A+ L+++M+   +  + V YN  +     +G ++ + +F   +
Sbjct: 240 LFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEM 299

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +GLVP+  TY+ L+    K R +  A++L +++      P + +YN ++ G    G+ 
Sbjct: 300 KAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKF 359

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA         KG  P+V++YN +L  L  +G+ EEA  +  EM   D +P + TYNIL
Sbjct: 360 DEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNIL 418

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+ + ALKV D M +    P+  + N +I RLC   K+D        + H+ C
Sbjct: 419 IDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVC 478

Query: 375 KPNEGTYNGLAMLCG-VGKVQEAFAIIQSL----------------------GNKQNSSP 411
            P+  T+  L    G  G+V +A+++ + +                      G K++   
Sbjct: 479 SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG-- 536

Query: 412 QEFYKYVITSLC---------------RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            + YK ++   C               + G+  +   L  E+   G  PD  +YS LI G
Sbjct: 537 HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           L   G   E  ++F  M+E     DV  +N ++ G CKS + D + ++ + M  KG  P 
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656

Query: 517 ETTYTILVEGIAHQDELELSAEVLKE 542
             TY  +V+G+A  D L+ +  + +E
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEE 682



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 231/484 (47%), Gaps = 12/484 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLC-----KANKMKKAIKVMEMMVSSGI 129
           R+ +++ A   L+ M S     D+V     LY++C     K  K+  A K    M + G+
Sbjct: 250 REGRIDAALSLLDEMKSNSFTADLV-----LYNVCIDCFGKVGKVDMAWKFFHEMKAQGL 304

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +PD  +YT L+  LCK   +  A++L E+++          YN+++ G    G  +++  
Sbjct: 305 VPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYS 364

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L+R  +KG +P+   Y+ +L    ++  V  A+++ D++  +   PNL +YN+L+  LC
Sbjct: 365 LLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLC 423

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G  E A++    +   G  PN+++ NI++  LC   + +EA  +   +D    SP   
Sbjct: 424 KAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSR 483

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+  LI  L   G+ D A  + ++M+     P+   Y  +I      G+ +   K   +M
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543

Query: 370 FHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
            HR C P+    N  +  +   G+V++  A+ + +  +        Y  +I  L + G +
Sbjct: 544 VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFS 603

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            + ++L YEM + G   D   Y+++I G C  G +++A ++   M+    +P V  + ++
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + GL K  R D +  +F+     G   N   Y+ L++G      ++ +  +L+EL  + +
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723

Query: 549 VSES 552
              S
Sbjct: 724 TPNS 727



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 219/465 (47%), Gaps = 4/465 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M   G  P+++    ++  LCKA K+ +A  +   +      PD+ ++  L++ L ++
Sbjct: 436 DTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRR 495

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V  A  L EKM D     N V Y SL++     G      +    ++ +G  P+    
Sbjct: 496 GRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLL 555

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  ++  +K   V     L ++I A+G  P++ SY++L+ GL K G + E  + F ++  
Sbjct: 556 NSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKE 615

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G   +V++YN ++   C  G+ ++A +LL EM      PT+VTY  ++  LA   + D 
Sbjct: 616 QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDE 675

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A  + +E        +   Y+ +I      G++D     L+++  +   PN  T+N L  
Sbjct: 676 AYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLD 735

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            L    ++ EA    Q++ N + S     Y  +I  LC   K  +AF    EM K G  P
Sbjct: 736 ALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKP 795

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           ++ TY+++I GL   G + EA  +F   +     PD   +NA++ GL  + +   +  VF
Sbjct: 796 NNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVF 855

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSA---EVLKELQLRQ 547
           +    KG   N  T  +L++ +   D LE +A    VL+E+   Q
Sbjct: 856 EETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQ 900



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 222/455 (48%), Gaps = 8/455 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A+  LER   KG  P V+    +L  L +  K+++A+++ + M      P+ ++Y 
Sbjct: 358 KFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNLTTYN 416

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G +  A+++ + M++ G   N +T N ++  LC    L+++      L  K
Sbjct: 417 ILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK 476

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P++ T+  L++   +   V  A  L + ++     PN+V Y  L+    K GR E+ 
Sbjct: 477 VCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG 536

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + ++++  +G  P+++  N  +  +   G  E+   L  E+      P + +Y+ILI  
Sbjct: 537 HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G +    K+  EM +        +YN +I   C  GKVD   + L++M  +  +P 
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQ---SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             TY  +   L  + ++ EA+ + +   S+G   N      Y  +I    + G+  +A+ 
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVV---IYSSLIDGFGKVGRIDEAYL 713

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L E+ + G TP+SYT++ L+  L     I+EA   F  M+     P+   ++ ++ GLC
Sbjct: 714 ILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLC 773

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
             R+ + +   +Q M ++G  PN  TYT ++ G+A
Sbjct: 774 MIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLA 808



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 184/413 (44%), Gaps = 4/413 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y   +  + +  N+ Y  Q++E+M   G+  +      LV        L ++   ++ + 
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMR 195

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +    P    Y+ L+ A          + L   +   G + N+  +  L+    +EGR +
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+    ++ S  F  ++V YN+ +      G+ + A +   EM      P  VTY  LI
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
           G L    + D A+++ +E+   R  P   +YN +I    S GK D     L++   + C 
Sbjct: 316 GVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375

Query: 376 PNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQ 433
           P+   YN +    G  GKV+EA  I   +  +Q+++P    Y  +I  LC+ G+   A +
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEM--RQDAAPNLTTYNILIDMLCKAGELEAALK 433

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M + G  P+  T + +I  LC    ++EA  IF+ ++     PD   F +L+ GL 
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +  R D +  +++ M++  Q+PN   YT L++        E   ++ KE+  R
Sbjct: 494 RRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHR 546



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 181/406 (44%), Gaps = 1/406 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  +++DA+   E+M+     P+VV  T+L+ +  K  + +   K+ + MV  G  
Sbjct: 490 DGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCS 549

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD       ++C+ K G V     L E+++  G   +  +Y+ L+ GL   G   ++ + 
Sbjct: 550 PDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKL 609

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + ++GL  +   Y+ +++   K   V  A +LL+++  KG +P +V+Y  ++ GL K
Sbjct: 610 FYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R +EA   F +  S G + NVV Y+ L+      GR +EA  +L E+     +P   T
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYT 729

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +N L+ +L    + D A      M   +  P+A +Y+ +I  LC   K +       +M 
Sbjct: 730 WNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQ 789

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +  KPN  TY  + A L   G V EA  +               Y  +I  L    K  
Sbjct: 790 KQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAM 849

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
            A+ +  E    G   +S T   L+  L     +E+A  +  V+ E
Sbjct: 850 DAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLRE 895



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 36/184 (19%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++ S  +  K  +AF ++  M K+ F P    Y++LI  L      +  L +F  M+E  
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 478 YKPDVDNFNAL------------------------------LLGLC-----KSRRTDLSL 502
           Y+ +V  F  L                              L  +C     K  + D++ 
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL-RQVVSESAVERLVMQY 561
           + F  M  +G +P++ TYT L+  +     L+ + E+ +EL L R V    A   ++M Y
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353

Query: 562 DFEG 565
              G
Sbjct: 354 GSAG 357



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 1/153 (0%)

Query: 393 VQEAFAIIQSLGNK-QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           V  AF   + +  K Q +   E Y   +  + R        Q+L EM+  GF   ++   
Sbjct: 113 VNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSV 172

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            L+        ++EA  +  +M ++ ++P    +  L+  L  + R D  L +F  M E 
Sbjct: 173 ELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEI 232

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           G   N   +T LV   A +  ++ +  +L E++
Sbjct: 233 GYEANVHLFTTLVRVFAREGRIDAALSLLDEMK 265


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 210/449 (46%), Gaps = 37/449 (8%)

Query: 117 AIKVMEMMVS-SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
           A KV + MV+  G++PDA S+  L+   C+ G +     L+  M+  G+  +  T   +V
Sbjct: 168 ARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIV 227

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
           R  C  G      +   R+++ G  PN   Y+  ++   K   V  A  +L++++AKG K
Sbjct: 228 RVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLK 287

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           PN+ ++  L+ GLCK G TE A R F  L  S  ++PNV +Y +++   C EG+   A  
Sbjct: 288 PNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEM 347

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           LL  M     +P   TY  LI      G  + A +++++M +  F+P+  +YN +I  LC
Sbjct: 348 LLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLC 407

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            +                                  GK+QEA+ +++   N+     +  
Sbjct: 408 KK----------------------------------GKIQEAYKVLRMANNQGLQLDKVT 433

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +IT  C++G    A  L   M + G  PD +TY++LI   C +  +EE+ ++F    
Sbjct: 434 YTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCL 493

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             +  P    + +++ G CK  ++  +L VF+ M++ G   +  TY  L+ G+  +  LE
Sbjct: 494 AIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLE 553

Query: 535 LSAEVLKELQLRQVVSESAVERLVMQYDF 563
             A  L E  L + +    V  + + +++
Sbjct: 554 -EARALYEGMLDKRLVPCEVTPVTLAFEY 581



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 207/457 (45%), Gaps = 6/457 (1%)

Query: 89  MVSKGHK-PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           MV++G   PD      L+   C+  +M++   ++ +M   G   D ++ T +V   C+KG
Sbjct: 175 MVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKG 234

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
                 +L  +M + G P N V Y + + GLC    + Q+   L+ ++ KGL PN +T++
Sbjct: 235 RFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHT 294

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
            L+    K      A +L   +I     KPN+ +Y V++ G CKEG+   A      +  
Sbjct: 295 SLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVE 354

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  PN  +Y  L+   C EG +  A EL+ +M      P I TYN LI  L   GK   
Sbjct: 355 QGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQE 414

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-A 385
           A KVL        +    +Y  +I   C +G +   +   ++M    C P+  TY  L A
Sbjct: 415 AYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIA 474

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C   +++E+  +       +    ++ Y  +I   C+ GK+  A ++   M + G   
Sbjct: 475 RYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQA 534

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           DS TY +LI GLC E  +EEA  ++  M +    P       L    C+  +  +++ + 
Sbjct: 535 DSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSIL 594

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             + ++ +     T  +LV  ++    +E ++  LK+
Sbjct: 595 DRLDKRRK---NHTVNVLVRKLSAIGHVEDASLFLKK 628



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 188/382 (49%), Gaps = 13/382 (3%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV-MEMMVSSGIIPDASSYT 137
           +  AF  LE MV+KG KP+V   T+L+  LCK    ++A ++ ++++ SS   P+  +YT
Sbjct: 271 VKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 330

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++   CK+G +  A  L+ +M + G   NT TY +L+ G C  G+ N + + ++++ ++
Sbjct: 331 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRRE 390

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN +TY+ L++   K+  +  A K+L     +G + + V+Y V++T  CK+G    A
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  F  +   G  P++ +Y  L+   C + + EE+ +L  +    +  PT  TY  +I  
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               GK+  AL+V + MV+   +  + +Y  +I+ LC E +++      + M  +R  P 
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPC 570

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK----GKTYQAF 432
           E T   LA   C   K   A +I+  L  ++ +       + +  L RK    G    A 
Sbjct: 571 EVTPVTLAFEYCRREKAVVAVSILDRLDKRRKN-------HTVNVLVRKLSAIGHVEDAS 623

Query: 433 QLLYEMTKYGFTPDSYTYSSLI 454
             L +        D   Y+S I
Sbjct: 624 LFLKKALDVDLAVDRLAYTSFI 645



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 3/286 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL  A + L RMV +G  P+    T L+   CK      A ++M  M   G  P+  
Sbjct: 338 KEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIY 397

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCKKG +  A +++    + G   + VTY  ++   C  G++  +L   +R+
Sbjct: 398 TYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRM 457

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G  P+  TY+ L+    ++R +  + KL D  +A    P   +Y  ++ G CK G++
Sbjct: 458 AENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKS 517

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+R F  +   G + + ++Y  L+  LC E R EEA  L   M      P  VT   L
Sbjct: 518 TSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTL 577

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                   K   A+ +LD + K   R    + N ++ +L + G V+
Sbjct: 578 AFEYCRREKAVVAVSILDRLDK---RRKNHTVNVLVRKLSAIGHVE 620



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 158/351 (45%), Gaps = 36/351 (10%)

Query: 30  PNLHSFS-LNKGFIR--VLASTQVTISPKDSVYTKPNRKPGNNNDTRH-RDHKLNDAFLQ 85
           PN+H+++ +  G+ +   LA  ++ +         PN        + H ++   N AF  
Sbjct: 324 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFEL 383

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           + +M  +G +P++     L+  LCK  K+++A KV+ M  + G+  D  +YT ++   CK
Sbjct: 384 MNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCK 443

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G++ YA+ L  +M + G   +  TY +L+   C    + +S +  D+ +   LVP   T
Sbjct: 444 QGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQT 503

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ ++    K     +A+++ + ++  G + + ++Y  L++GLCKE R EEA   +  + 
Sbjct: 504 YTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGML 563

Query: 266 SKGFEPNVVS--------------------------------YNILLRSLCMEGRWEEAN 293
            K   P  V+                                 N+L+R L   G  E+A+
Sbjct: 564 DKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKNHTVNVLVRKLSAIGHVEDAS 623

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             L +    D +   + Y   I S   + K   A ++ +++   + + +AA
Sbjct: 624 LFLKKALDVDLAVDRLAYTSFINSCYANKKYALATEISEKISSSQDKDAAA 674


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 227/462 (49%), Gaps = 2/462 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M S G KP++   T  +  L +A ++ +A ++M+ M   G  PD  +YT L++ LC 
Sbjct: 252 LEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCT 311

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  AM+L  KM+   +  + VTY +++      G+L +  +F   +   G  P+  T
Sbjct: 312 AGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVIT 371

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+ A  K   +  A  LLD +  +G  PNL +YN L++GL +  R ++A+  F ++ 
Sbjct: 372 FTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNME 431

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G  P   +Y + +      GR ++A E   +M     +P IV  N  + SLA  G+  
Sbjct: 432 TLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLR 491

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  + + +      P + +YN ++      G+VD  ++ L  M   +C+P+    N L 
Sbjct: 492 EAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLI 551

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             L   G+V EA+ +   L + + +     Y  +I  L ++G+  +A +L   MT  G  
Sbjct: 552 NTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCP 611

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P++ T+++++  LC    ++ AL++   M   +  PDV  FN ++ GL   +R   ++ +
Sbjct: 612 PNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWL 671

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           F  M +K   P+  T   L+ G+     +E + ++ ++   R
Sbjct: 672 FHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHR 712



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 191/394 (48%), Gaps = 4/394 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+DA     +M +  HKPD V    +L        + +  +    M + G  PD  ++T
Sbjct: 314 KLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LVN LCK GN+  A  L++ M   G   N  TYN+L+ GL  +  L+ +L   + +   
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETL 433

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+VP A+TY   ++   K      A++  + +  +G  PN+V+ N  L  L + GR  EA
Sbjct: 434 GVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREA 493

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  L S G  P+ V+YN++++     G+ +EA ELL++M      P I+  N LI +
Sbjct: 494 KVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINT 553

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D A K+   +   +  P+  +YN +IA L  EG+V   ++    M    C PN
Sbjct: 554 LYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPN 613

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             T+N  L  LC   +V  A  ++  +    N  P    +  +I  L  + +   A  L 
Sbjct: 614 TITFNTILDCLCKNDEVDLALKMLYKM-TTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLF 672

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           ++M K   TPD  T  +L+ G+   GL+E+A +I
Sbjct: 673 HQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKI 705



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 226/458 (49%), Gaps = 3/458 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++++A   ++RM   G  PDVV  T L+  LC A K+  A+++   M +S   PD  
Sbjct: 276 RAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRV 335

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++     G++G   +   +ME  GY  + +T+  LV  LC  GN++++   LD +
Sbjct: 336 TYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVM 395

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G++PN  TY+ L+    +   +  A+ L +++   G  P   +Y + +    K GR+
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRS 455

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A+  F  +  +G  PN+V+ N  L SL   GR  EA  +   +     +P  VTYN++
Sbjct: 456 DKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMM 515

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+ D A+++L +M + +  P     N +I  L   G+VD   K   ++   + 
Sbjct: 516 MKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKL 575

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P   TYN L A L   G+VQ A  +  S+           +  ++  LC+  +   A +
Sbjct: 576 APTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALK 635

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +LY+MT     PD  T++++I GL +E  + +A+ +F  M++    PD      LL G+ 
Sbjct: 636 MLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVV 694

Query: 494 KSRRTDLSLEVFQMMIEK-GQMPNETTYTILVEGIAHQ 530
           K+   + + ++ +  + + G   +   +  L+ GI  Q
Sbjct: 695 KNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQ 732



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 218/457 (47%), Gaps = 1/457 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M   G   +      L++ L ++   ++A+++   MV  G+ P   +++ L+    K+ 
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR 243

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +      L+E+ME  G   N  TY   +R L   G ++++ + + R+   G  P+  TY+
Sbjct: 244 DTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYT 303

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++A      +  AM+L   + A   KP+ V+Y  +L      G       F+ ++ + 
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEAD 363

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G+ P+V+++ IL+ +LC  G  +EA  LL  M      P + TYN LI  L    + D A
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAM 386
           L + + M      P+A +Y   I      G+ D  ++  ++M  R   PN    N  L  
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYS 483

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           L  +G+++EA  I   L +   +     Y  ++    + G+  +A +LL +M++    PD
Sbjct: 484 LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
               +SLI  L   G ++EA ++F  +++    P V  +N L+ GL K  +   ++E+F 
Sbjct: 544 IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            M   G  PN  T+  +++ +   DE++L+ ++L ++
Sbjct: 604 SMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM 640



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 231/526 (43%), Gaps = 49/526 (9%)

Query: 64  RKPGNNNDTRHRDHKLN------DAFLQLERMVSKGHKPDVVQAT----NLLYDLCKANK 113
           RKP N   ++     LN      DAF       S    P VV  T    ++L  L    +
Sbjct: 83  RKPKNALSSKEVMAVLNSILDPTDAFSYFN---SVAEMPFVVHTTETCNHMLEILRIHRR 139

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +   + V  +M +  I  D ++Y  +   L  +G +        KM + G+  N  +YN 
Sbjct: 140 VGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNG 199

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L+  L   G   ++L+   R++ +GL P+  T+S L+ A  K R       LL+++ + G
Sbjct: 200 LIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLG 259

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
            KPN+ +Y + +  L + GR +EA R  + +   G  P+VV+Y +L+ +LC  G+ ++A 
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           EL  +M      P  VTY  ++   +  G      +   EM    + P   ++  ++  L
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEA---FAIIQSLG----- 404
           C  G +D     LD M  +   PN  TYN L + L  V ++ +A   F  +++LG     
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTA 439

Query: 405 -------------NKQNSSPQEFYKYVIT--------------SLCRKGKTYQAFQLLYE 437
                         + + + + F K  I               SL   G+  +A  +   
Sbjct: 440 YTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNR 499

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +   G  PDS TY+ +++     G ++EA+E+   M E   +PD+   N+L+  L K+ R
Sbjct: 500 LKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR 559

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            D + ++F  + +    P   TY  L+ G+  + +++ + E+   +
Sbjct: 560 VDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASM 605



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 213/491 (43%), Gaps = 39/491 (7%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++ +++ A   L +M +    PDV+    +++ L    ++  AI +   M    + 
Sbjct: 622  DCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLT 680

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEK-MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  +   L+  + K G +  A ++ E  +   G   +   +  L+ G+       +++ 
Sbjct: 681  PDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTIL 740

Query: 190  FLDRLI------------------------------------QKGLVPNAFTYSFLLEAA 213
            F DRL+                                    + G+ P   +Y+FL+E  
Sbjct: 741  FGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGF 800

Query: 214  YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
                    A  L  ++   G  P++ +YN+LL    K G+  E    +  +     +PN 
Sbjct: 801  LGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNT 860

Query: 274  VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
            +++NI++ +L      ++A +L  ++  GD SPT  TY  L+  L   G+ + A ++ +E
Sbjct: 861  ITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEE 920

Query: 334  MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGK 392
            MV    RP+ A YN +I      G V+   +   +M     +P+  +Y  L   LC  G+
Sbjct: 921  MVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGR 980

Query: 393  VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            V +A    + L           Y  +I  L R  +  +A  L  EM   G  PD +TY+S
Sbjct: 981  VDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNS 1040

Query: 453  LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
            LI  L + G++E+A +++  ++    +P+V  +NAL+ G   S  +D +  V++ M+  G
Sbjct: 1041 LILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGG 1100

Query: 513  QMPNETTYTIL 523
              PN  T+  L
Sbjct: 1101 CSPNTGTFAQL 1111



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 212/487 (43%), Gaps = 43/487 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A +   R+ S G  PD V    ++    KA ++ +AI+++  M  +   PD     
Sbjct: 489 RLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVIN 548

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N L K G V  A ++  +++D       VTYN+L+ GL   G + ++++    +   
Sbjct: 549 SLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGN 608

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN  T++ +L+   K   V  A+K+L  +      P+++++N ++ GL  E R  +A
Sbjct: 609 GCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDA 668

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT---YNIL 314
           I  F  +  K   P+ V+   LL  +   G  E+A ++ AE D   R    V    +  L
Sbjct: 669 IWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKI-AE-DFVHRLGVYVDRRFWEDL 725

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV--------------- 359
           +G +     T+  +   D +V GR     +   PII  LC   +                
Sbjct: 726 MGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELG 785

Query: 360 ---------------------DLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAF 397
                                ++      +M +  C P+  TYN L    G  GK+ E F
Sbjct: 786 VKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELF 845

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
            + + +           +  +I +L +     +A  L Y++    F+P   TY  L+ GL
Sbjct: 846 ELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGL 905

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
              G +EEA E+F  M +Y  +P+   +N L+ G  K+   + + E+F+ M+ +G  P+ 
Sbjct: 906 LKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDL 965

Query: 518 TTYTILV 524
            +YT LV
Sbjct: 966 KSYTSLV 972



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 166/362 (45%), Gaps = 11/362 (3%)

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY  + +  +   G+         +   G   N  SYN L+  L + G   EA+  +R +
Sbjct: 161 TYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRM 220

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +G +P++ +++ L+ +       E    LL EM+     P I TY I I  L   G+ 
Sbjct: 221 VLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRI 280

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           D A +++  M      P   +Y  +I  LC+ GK+D  ++   +M     KP+  TY  +
Sbjct: 281 DEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTY--I 338

Query: 385 AML-----CG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            ML     CG +G+V+E ++ +++ G   +      +  ++ +LC+ G   +AF LL  M
Sbjct: 339 TMLDKFSDCGDLGRVKEFWSEMEADGYAPDVIT---FTILVNALCKAGNIDEAFHLLDVM 395

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            K G  P+ +TY++LI GL     +++AL++F  ME     P    +   +    KS R+
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRS 455

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
           D +LE F+ M  +G  PN       +  +A    L  +  +   L+   +  +S    ++
Sbjct: 456 DKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMM 515

Query: 559 MQ 560
           M+
Sbjct: 516 MK 517


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 210/442 (47%), Gaps = 1/442 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
             RM +    P       LL+ L K+   +   K    M+ +GI P   +Y  +++ LCK
Sbjct: 242 FSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCK 301

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G++  + +L  +M + G   + VTYNSL+ G   +G+L +     + +   G VP+  T
Sbjct: 302 EGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIIT 361

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K   +  A +   ++   G KPN+V+Y+ L+   CKEG  + AI+ F D+ 
Sbjct: 362 YNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMR 421

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PN  +Y  L+ + C  G   EA +LL +M        IVTY  L+  L   G+  
Sbjct: 422 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 481

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A +V   M+K    P+   Y  ++       +++  +K L QM     KP+   Y  + 
Sbjct: 482 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 541

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C   K++E   I++ + ++  S+       +I +  + GK+  A     EM   G  
Sbjct: 542 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 601

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
               TY  LI GLC  G++E A++ F  M     +P+V  + +L+ GLCK+   + + ++
Sbjct: 602 ATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKL 661

Query: 505 FQMMIEKGQMPNETTYTILVEG 526
           F  M  +G  P+ T +T L++G
Sbjct: 662 FDEMQCRGMTPDITAFTALIDG 683



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 226/480 (47%), Gaps = 20/480 (4%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F+Q+  M   G  PDVV   +L+    K   +++   +   M   G +PD  +Y  L+NC
Sbjct: 312 FVQMREM---GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 368

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            CK   +  A +   +M++ G   N VTY++L+   C  G +  +++    + + GL+PN
Sbjct: 369 YCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPN 428

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            FTY+ L++A  K   +  A KLL+D++  G K N+V+Y  LL GLCK GR  EA   FR
Sbjct: 429 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 488

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +   G  PN   Y  L+       R E+A ++L +M   +  P ++ Y  +I       
Sbjct: 489 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR 548

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE-----GKVDLVVKCLDQMFHRRCKPN 377
           K +    +L+EM     +    S NP+I+    +     GK    +    +M     +  
Sbjct: 549 KLEETKLILEEM-----KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEAT 603

Query: 378 EGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             TY  L   LC  G V+ A   F  + SLG + N +    Y  +I  LC+      A +
Sbjct: 604 IVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVA---VYTSLIDGLCKNNCIESAKK 660

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM   G TPD   +++LI G    G ++EAL +   M E   + D+  + +L+ G  
Sbjct: 661 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFS 720

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +      + + F  MIEKG +P E     L+     + +L+ + E+  E++   +++ESA
Sbjct: 721 QCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESA 780



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 185/396 (46%), Gaps = 5/396 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            K+  AF     M + G KP+VV  + L+   CK   M+ AIK+   M  +G++P+  +Y
Sbjct: 373 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTY 432

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L++  CK GN+  A +L+  M   G   N VTY +L+ GLC  G + ++ +    +++
Sbjct: 433 TSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 492

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+ PN   Y+ L+    K   +  AMK+L  +     KP+L+ Y  ++ G C + + EE
Sbjct: 493 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 552

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
                 ++ S+G   N V    ++ +    G+  +A     EM       TIVTY +LI 
Sbjct: 553 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 612

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G  + A+     M+    +P+ A Y  +I  LC    ++   K  D+M  R   P
Sbjct: 613 GLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTP 672

Query: 377 NEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +   +   A++ G    G +QEA  +I  +           Y  +++   + G+ +QA +
Sbjct: 673 DITAFT--ALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 730

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
              EM + G  P+      L+R     G ++EA+E+
Sbjct: 731 FFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 766



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 194/418 (46%), Gaps = 1/418 (0%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P A S  +L++ L K GN     +    M   G   +  TYN ++  LC  G+L  S +
Sbjct: 251 LPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRR 310

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              ++ + GL P+  TY+ L++   K   +     L +++   G  P++++YN L+   C
Sbjct: 311 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC 370

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K  +   A  +F ++ + G +PNVV+Y+ L+ + C EG  + A +L  +M      P   
Sbjct: 371 KFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEF 430

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  LI +    G    A K+L++M++   + +  +Y  ++  LC  G++    +    M
Sbjct: 431 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                 PN+  Y  L        ++++A  I++ +           Y  +I   C + K 
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 550

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +   +L EM   G + +    +++I      G   +AL  F  M++   +  +  +  L
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 610

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           + GLCK+   +L+++ F  M+  G  PN   YT L++G+   + +E + ++  E+Q R
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCR 668



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 168/368 (45%), Gaps = 7/368 (1%)

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           LG L ++ +   R+     +P A + +FLL    K        K  +D+I  G  P++ +
Sbjct: 232 LGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFT 291

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YNV++  LCKEG  E + R F  +   G  P+VV+YN L+      G  EE   L  EM 
Sbjct: 292 YNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 351

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P I+TYN LI       K   A +   EM     +P+  +Y+ +I   C EG + 
Sbjct: 352 DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQ 411

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL---GNKQNSSPQEFYK 416
             +K    M      PNE TY  L    C  G + EA+ ++  +   G K N      Y 
Sbjct: 412 GAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT---YT 468

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            ++  LC+ G+  +A ++   M K G +P+   Y++L+ G      +E+A++I   M E 
Sbjct: 469 ALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC 528

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           + KPD+  + +++ G C  R+ + +  + + M  +G   N    T +++      +   +
Sbjct: 529 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 588

Query: 537 AEVLKELQ 544
               +E+Q
Sbjct: 589 LNFFQEMQ 596



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 173/382 (45%), Gaps = 30/382 (7%)

Query: 17  EPFRKAYGFYSQI------PNLHSFS----------LNKGFIRVLASTQVT-ISPKDSVY 59
           E   +A+ ++S++      PN+ ++S          + +G I++    + T + P +  Y
Sbjct: 373 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTY 432

Query: 60  TK---PNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKK 116
           T     N K GN          L +A+  L  M+  G K ++V  T LL  LCKA +M +
Sbjct: 433 TSLIDANCKAGN----------LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIE 482

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A +V   M+  GI P+   YT LV+   K   +  AM+++++M +     + + Y S++ 
Sbjct: 483 AEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 542

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           G C    L ++   L+ +  +G+  N    + +++A +K      A+    ++   G + 
Sbjct: 543 GHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 602

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            +V+Y VL+ GLCK G  E A+ +F  + S G +PNV  Y  L+  LC     E A +L 
Sbjct: 603 TIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLF 662

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM     +P I  +  LI     HG    AL ++  M +         Y  +++     
Sbjct: 663 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 722

Query: 357 GKVDLVVKCLDQMFHRRCKPNE 378
           G++    K  ++M  +   P E
Sbjct: 723 GELHQARKFFNEMIEKGILPEE 744



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 94/198 (47%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K +DA    + M   G +  +V    L+  LCKA  ++ A+     M+S G+ 
Sbjct: 577 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQ 636

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+ + YT L++ LCK   +  A +L ++M+  G   +   + +L+ G    GNL ++L  
Sbjct: 637 PNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL 696

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + R+ +  +  +   Y+ L+    +   +H A K  +++I KG  P  V    LL    K
Sbjct: 697 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYK 756

Query: 251 EGRTEEAIRFFRDLPSKG 268
            G+ +EAI    ++   G
Sbjct: 757 RGQLDEAIELKNEMERMG 774


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 232/482 (48%), Gaps = 3/482 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+++A+  L+RM   G  PDVV  T L+  LC A K+  A ++   M +S   PD  
Sbjct: 274 RAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRV 333

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++     G++    +   +ME  GY  + VT+  L+  LC +G ++++   LD +
Sbjct: 334 TYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVM 393

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ PN  TY+ L+    +   +  A++L + + + G +    +Y + +    K G +
Sbjct: 394 KKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGES 453

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +AI+ F  + + G  PN+V+ N  L SL  +GR EEA E    +     +P  +TYNIL
Sbjct: 454 GKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNIL 513

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G+ D A+K+L EM +    P     N +I  L    +VD   K   +M   + 
Sbjct: 514 MRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKL 573

Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P   TYN  LA L   G+VQEA A+ + +           +  ++  LC+ G+   A +
Sbjct: 574 APTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALK 633

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L+ MT+    PD  TY+++I GL  E  +  A  +F  M++  Y PD      LL G+ 
Sbjct: 634 MLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIY-PDYVTLCTLLPGVI 692

Query: 494 KSRRTDLSLEVFQMMIEK-GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           K  R + +  V +  +   G   + + +  L+ GI  + E+  S    + L    +  + 
Sbjct: 693 KDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDD 752

Query: 553 AV 554
           +V
Sbjct: 753 SV 754



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 245/557 (43%), Gaps = 78/557 (14%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KLN+A     +M +  HKPD V    LL        +    +    M + G +PD  ++T
Sbjct: 312 KLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFT 371

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G V  A   ++ M+  G   N  TYN+L+ GL  L  L+++L+  + +   
Sbjct: 372 ILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESL 431

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL   A+TY   ++   K      A+K  + +   G  PN+V+ N  L  L ++GR EEA
Sbjct: 432 GLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEA 491

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD----------------- 300
             FF  L   G  P+ ++YNIL+R     GR ++A +LL+EM+                 
Sbjct: 492 KEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDT 551

Query: 301 --GGDR----------------SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
               DR                +PT+VTYN L+  L   G+   A  +   M+     P+
Sbjct: 552 LYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPN 611

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL------------------ 384
             S+N ++  LC  G+VDL +K L +M    C P+  TYN +                  
Sbjct: 612 TISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFH 671

Query: 385 --------------AMLCGV---GKVQEAFAI----IQSLGNKQNSSPQEFYKYVITSLC 423
                          +L GV   G++++AF +    +  +G+  + S   F++ ++  + 
Sbjct: 672 QMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGS---FWEDLMGGIL 728

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV-VMEEYDYKPDV 482
            + +  Q+      +       D      L++ LC  G   +A  +F+ + + +   P +
Sbjct: 729 IEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSL 788

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           + +N+L+ GL K+R T+++  +F  M   G  P+  TY + ++ +    +++   ++ +E
Sbjct: 789 EAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEE 848

Query: 543 LQLRQVVSESAVERLVM 559
           +  R     +    +V+
Sbjct: 849 MLFRGCKPNTITHNIVI 865



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 222/463 (47%), Gaps = 3/463 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RMVS+G KP +   + L+  L K   ++  + +++ M S G+ P+  ++T  +  L + G
Sbjct: 217 RMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A  ++++M+D G   + VTY  L+  LC  G LN + +   ++      P+  TY 
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            LL+       + A  +   ++ A G  P++V++ +L+  LCK G+ +EA      +  +
Sbjct: 337 TLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQ 396

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  PN+ +YN L+  L    R +EA EL   M+      T  TY + I      G++  A
Sbjct: 397 GVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKA 456

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           +K  ++M      P+  + N  +  L  +G+++   +  + +      P+  TYN L   
Sbjct: 457 IKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRC 516

Query: 388 CG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            G  G+V +A  ++  +              +I +L +  +  +A+++   M +    P 
Sbjct: 517 YGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPT 576

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             TY++L+ GL  EG ++EA  +F  M   D  P+  +FN LL  LCK+   DL+L++  
Sbjct: 577 VVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLF 636

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            M E    P+  TY  ++ G+  ++ +  +  +    Q+++V+
Sbjct: 637 RMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFH--QMKKVI 677



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 223/493 (45%), Gaps = 44/493 (8%)

Query: 91  SKGHKPDVVQAT---NLLYDLCKANK-MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           S    P V+  T   N + ++ +A++ ++  + V  +M    I    ++Y  +   L  +
Sbjct: 111 SVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIR 170

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A   +EKM   G+  N  +Y  L+  L   G   ++L+   R++ +G+ P+  TY
Sbjct: 171 GGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTY 230

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           S L+ A  K R +   M LL ++ + G +PN+ ++ + +  L + G+ +EA    + +  
Sbjct: 231 SALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDD 290

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P+VV+Y +L+ +LC  G+   A EL  +M      P  VTY  L+   + HG  D 
Sbjct: 291 AGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDA 350

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
             +   EM    + P   ++  +I  LC  GKVD     LD M  +   PN  TYN L  
Sbjct: 351 IKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL-- 408

Query: 387 LCGVGKVQ------EAFAIIQSLG---------------NKQNSSPQEFYKY-------- 417
           +CG+ ++       E F  ++SLG                K   S +    +        
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGI 468

Query: 418 ---------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                     + SL  +G+  +A +    + K G  PD+ TY+ L+R     G +++A++
Sbjct: 469 VPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIK 528

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   MEE    P+V   N+L+  L K+ R D + ++FQ M E    P   TY  L+ G+ 
Sbjct: 529 LLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLG 588

Query: 529 HQDELELSAEVLK 541
            +  ++ +  + K
Sbjct: 589 KEGRVQEATALFK 601



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 220/464 (47%), Gaps = 3/464 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A + LE+M   G   +      L++ L K+   ++A+KV   MVS GI P   +Y+ 
Sbjct: 173 LREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSA 232

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L K+ ++   M L+++ME  G   N  T+   +R L   G ++++   L R+   G
Sbjct: 233 LMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAG 292

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY+ L++A      ++ A +L   + A   KP+ V+Y  LL      G  +   
Sbjct: 293 CGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIK 352

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F+ ++ + G+ P+VV++ IL+ +LC  G+ +EA   L  M     +P + TYN LI  L
Sbjct: 353 EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGL 412

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + D AL++ + M       +A +Y   I      G+    +K  ++M      PN 
Sbjct: 413 LRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNI 472

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
              N  L  L   G+++EA      L  K   +P    Y  ++    + G+   A +LL 
Sbjct: 473 VACNASLYSLAEQGRLEEAKEFFNGL-KKCGLAPDAITYNILMRCYGKAGRVDDAIKLLS 531

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM + G  P+    +SLI  L     ++EA ++F  M+E    P V  +N LL GL K  
Sbjct: 532 EMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEG 591

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           R   +  +F+ MI     PN  ++  L++ +    E++L+ ++L
Sbjct: 592 RVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML 635



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 197/451 (43%), Gaps = 36/451 (7%)

Query: 75   RDHKLNDAFLQLERMVSK-GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
            +D ++ DAF   +  V   G   D     +L+  +    ++ ++I   E +V + I  D 
Sbjct: 693  KDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDD 752

Query: 134  SSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
            S    LV  LCK G    A  +  K+ + +    +   YNSL+ GL        +     
Sbjct: 753  SVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFY 812

Query: 193  RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            ++   G  P+ FTY+  L+A  K   +     L ++++ +G KPN +++N+++ GL K  
Sbjct: 813  KMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSN 872

Query: 253  RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              ++AI  + DL S  F P   +Y  L+  L   GR EEA +   EM      P    YN
Sbjct: 873  SLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYN 932

Query: 313  ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            IL+      G  + A ++   MVK   RP   SY+             ++V CL      
Sbjct: 933  ILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYS-------------IMVDCL------ 973

Query: 373  RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
                           C VGKV +A    + L           Y  +I  L R  +  +A 
Sbjct: 974  ---------------CMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEAL 1018

Query: 433  QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             L  EM   G TPD YTY++LI  L + G++EEA +++  ++    +P+V  +NAL+ G 
Sbjct: 1019 SLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGH 1078

Query: 493  CKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
              S   D +  V++ M+  G  PN  T+  L
Sbjct: 1079 SMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 229/512 (44%), Gaps = 39/512 (7%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            +++DA   L  M   G  P+VV   +L+  L KA+++ +A K+ + M    + P   +Y 
Sbjct: 522  RVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYN 581

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+  L K+G V  A  L + M     P NT+++N+L+  LC  G ++ +L+ L R+ + 
Sbjct: 582  TLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEM 641

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               P+  TY+ ++    KE  V+ A  L   +  K   P+ V+   LL G+ K+GR E+A
Sbjct: 642  NCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDA 700

Query: 258  IR----------------FFRDL-----------PSKGFEPNVVSYNI---------LLR 281
             R                F+ DL            S  F  ++V   I         L++
Sbjct: 701  FRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVK 760

Query: 282  SLCMEGRWEEA-NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             LC  G+  +A N  L        +P++  YN LI  L     T+ A  +  +M      
Sbjct: 761  FLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCT 820

Query: 341  PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
            P   +YN  +  L   GK+  +    ++M  R CKPN  T+N +   L     + +A  +
Sbjct: 821  PDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDL 880

Query: 400  IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
               L +   S     Y  +I  L + G+  +A Q   EM  YG  P+   Y+ L+ G   
Sbjct: 881  YYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGK 940

Query: 460  EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            +G +E A E+F  M +   +PD+ +++ ++  LC   + D +L  F+ +   G  P+   
Sbjct: 941  QGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVC 1000

Query: 520  YTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            Y +++ G+     +E +  +  E++ R +  +
Sbjct: 1001 YNLMINGLGRSQRVEEALSLFDEMRNRGITPD 1032



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 214/492 (43%), Gaps = 43/492 (8%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            ++ ++ +A    + M++    P+ +    LL  LCK  ++  A+K++  M      PD  
Sbjct: 589  KEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVL 648

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +Y  ++  L K+  V YA  L  +M+   YP + VT  +L+ G+   G +  + +     
Sbjct: 649  TYNTVIYGLIKENRVNYAFWLFHQMKKVIYP-DYVTLCTLLPGVIKDGRIEDAFRVAKEF 707

Query: 195  IQK------GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI-------------IAKGGK 235
            +        G          L+EA   +  + A   + + I             + K GK
Sbjct: 708  VHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGK 767

Query: 236  ------------------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                              P+L +YN L+ GL K   TE A   F  + + G  P+V +YN
Sbjct: 768  AVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYN 827

Query: 278  ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            + L +L   G+ +E  +L  EM      P  +T+NI+I  L      D A+ +  +++ G
Sbjct: 828  LFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSG 887

Query: 338  RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQ 394
             F P+  +Y P+I  L   G+++   +  ++M    C PN   YN   ++ G GK   V+
Sbjct: 888  DFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYN--ILMNGFGKQGDVE 945

Query: 395  EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
             A  + + +  +      + Y  ++  LC  GK   A     E+   G  PD   Y+ +I
Sbjct: 946  TACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMI 1005

Query: 455  RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
             GL     +EEAL +F  M      PD+  +NAL+L L  +   + + ++++ +  KG  
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065

Query: 515  PNETTYTILVEG 526
            PN  TY  L+ G
Sbjct: 1066 PNVFTYNALIRG 1077



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 144/276 (52%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  K+ + F   E M+ +G KP+ +    +++ L K+N + KAI +   ++S    
Sbjct: 831  DALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFS 890

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L++ L K G +  A Q  E+M DYG   N   YN L+ G    G++  + + 
Sbjct: 891  PTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACEL 950

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              R++++G+ P+  +YS +++       V  A+   +++   G  P+LV YN+++ GL +
Sbjct: 951  FRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGR 1010

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              R EEA+  F ++ ++G  P++ +YN L+ +L + G  EEA ++  E+      P + T
Sbjct: 1011 SQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFT 1070

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            YN LI   +  G  D A  V  +M+ G  RP+  ++
Sbjct: 1071 YNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 262/541 (48%), Gaps = 15/541 (2%)

Query: 9   STLANPSPEPFRKAYGFYSQIPNLHSF-SLNKGFIR--VLASTQVTISPKDSVYTKPNRK 65
           S + N + + F+K    +   P + S+ +L   FI   +L   +  ++  ++V   PN +
Sbjct: 91  SKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQ 150

Query: 66  PGNN-NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM 124
             N       +  +  +A   L+ M SK  KPDV     ++  + K+  +  A++V + M
Sbjct: 151 TYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEM 210

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLG 182
              G++PD   Y  +++   K+G+     ++ E++      YP N VTYN ++ GLC +G
Sbjct: 211 FERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYP-NVVTYNVMINGLCKMG 269

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
             ++SL+  +R+ +     + FTYS L+        V  A+++  +++ +    ++V+YN
Sbjct: 270 RFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYN 329

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA---NELLAEM 299
            LL G C+ G+ +E+   +  +  +    NVVSYNI +R L    + EEA    ELL   
Sbjct: 330 ALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRR 388

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
             G  S    TY +LI  L  +G  + ALK+L E   G  +  A +Y+ I+  L  +G+V
Sbjct: 389 GSGADS---TTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRV 445

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D  +  + QM    C+ +    N L        K++EA    + +  K  S     Y  +
Sbjct: 446 DEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTL 505

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I  LC+  +   A+  + EM +  + PD  TYS L+ GLC    I+ AL ++  +     
Sbjct: 506 INGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL 565

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           +PDV   N L+ GLC + + + +L ++  M +   +PN  T+  L++G+    E E+++ 
Sbjct: 566 EPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASV 625

Query: 539 V 539
           +
Sbjct: 626 I 626



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 235/483 (48%), Gaps = 7/483 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F ++E +   G KP +     LL    +AN ++KA   +    + GI+P+  +Y  L+
Sbjct: 99  DCFQKMEEIF--GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILI 156

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
               KK     A  L++ M       +  +Y +++ G+   G+L  +L+  D + ++GLV
Sbjct: 157 KISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLV 216

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG--KPNLVSYNVLLTGLCKEGRTEEAI 258
           P+   Y+ +++  +K RG +   K + + + KG    PN+V+YNV++ GLCK GR +E++
Sbjct: 217 PDVMCYNIMIDGFFK-RGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESL 275

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             +  +     E ++ +Y+ L+  LC  G  + A E+  EM        +VTYN L+   
Sbjct: 276 EMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGF 335

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK   + ++   M K     +  SYN  I  L    KV+  +   + +  R    + 
Sbjct: 336 CRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADS 394

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TY  L   LC  G + +A  I++   +  +      Y  ++  L ++G+  +A  ++++
Sbjct: 395 TTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQ 454

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M KYG     +  + LI G      +EEA+  F  ME     P V ++N L+ GLCK+ R
Sbjct: 455 MDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAER 514

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
              +    + M+EK   P+  TY++L++G+    +++++  + +++ ++ +  +  +  +
Sbjct: 515 FSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNI 574

Query: 558 VMQ 560
           +M 
Sbjct: 575 LMH 577



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 177/374 (47%), Gaps = 6/374 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + MV +    DVV    LL   C+A K+K++ ++  MM       +  SY   +  L + 
Sbjct: 314 KEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFEN 372

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A+ + E +   G   ++ TY  L+ GLC  G+LN++L+ L      G   +AF Y
Sbjct: 373 RKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAY 432

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           S +++   K+  V  A+ ++  +   G + +    N L+ G  +  + EEAI FFR++ +
Sbjct: 433 SSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMET 492

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG  P VVSYN L+  LC   R+ +A   + EM   D  P ++TY++L+  L    K D 
Sbjct: 493 KGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDM 552

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           AL +  +++     P    +N ++  LCS GK++  +     M    C PN  T+N L  
Sbjct: 553 ALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTL-- 610

Query: 387 LCGVGKVQEA--FAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           + G+ K +E    ++I +   K    P    Y   +  LC  G+      L  +  K G 
Sbjct: 611 MDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGI 670

Query: 444 TPDSYTYSSLIRGL 457
            P S T+  L+R +
Sbjct: 671 LPTSITWYILVRAV 684



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 150/306 (49%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + K+ +A    E +  +G   D      L++ LCK   + KA+K+++     G   DA +
Sbjct: 372 NRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFA 431

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y+ +V+ L K+G V  A+ +V +M+ YG   +    N L+ G      L +++ F   + 
Sbjct: 432 YSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREME 491

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            KG  P   +Y+ L+    K      A   + +++ K  KP++++Y++L+ GLC+  + +
Sbjct: 492 TKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKID 551

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A+  +R +  KG EP+V  +NIL+  LC  G+ E+A  L + M   +  P +VT+N L+
Sbjct: 552 MALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLM 611

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L    + + A  +   M K  F+P   SYN  +  LCS G++   +   D        
Sbjct: 612 DGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGIL 671

Query: 376 PNEGTY 381
           P   T+
Sbjct: 672 PTSITW 677



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 102/209 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL +A      M +KG  P VV    L+  LCKA +   A   ++ M+     PD  
Sbjct: 476 RASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMI 535

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L++ LC+   +  A+ L  ++   G   +   +N L+ GLC  G +  +L     +
Sbjct: 536 TYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNM 595

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q   +PN  T++ L++  YK R    A  +   +   G +P+++SYN+ L GLC  GR 
Sbjct: 596 KQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRI 655

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            + I  F D    G  P  +++ IL+R++
Sbjct: 656 SDGIALFDDALKNGILPTSITWYILVRAV 684



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 47/109 (43%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ DA L    M      P++V    L+  L KA + + A  +   M  +G  PD  SY 
Sbjct: 584 KIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYN 643

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
             +  LC  G +   + L +     G    ++T+  LVR +  LG L+ 
Sbjct: 644 ITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDS 692


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 202/429 (47%), Gaps = 1/429 (0%)

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           ME + S     +  +YT L+N  C  G++  A Q +  +   G   ++  Y S V G C 
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            G L  + +    +  +G +  AFTY+ LL        V  AM +   + A    P+   
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHV 179

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y  ++ GLC+ GRTEEA     +  S GFEPN+V YN L+   C  G  E A ++   MD
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           G   SP + TY  LI  L   GK + A+ +   MV+    P+  +Y  +I   C+EG + 
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
              + L  M      PN+ T++ L   LC   KV+EA   + SL  K     +  Y  +I
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC+ GK   A +L+ +M   GF PD+++YSSLI GLC +  + +A  +   M E   +
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
                +  ++  L +   ++   ++F  MI  G  P+  TYT+ V     +  +E +  +
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 540 LKELQLRQV 548
           + ++  R V
Sbjct: 480 IVQMVDRGV 488



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 206/410 (50%), Gaps = 13/410 (3%)

Query: 90  VSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           +S G +P++V    L+   C A +M+ A+KV E M  +   P+  +YT L++ LCK G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             AM L  +M + G   N VTY +L++G C  G+L  + + L  +   GLVPN +T+S L
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           ++A  K   V  A   L  ++ KG K N V Y  L+ GLCK G+ + A    + + S+GF
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIVTYNILIGSLAYHGKTDHA 327
            P+  SY+ L+  LC + +  +A  +L +M   G   SP  VTY I+I  L     ++  
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP--VTYTIIIDELVREVGSEGP 441

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            K+ D+M+     P   +Y   +   C EG+++     + QM  R   PN  TYN L   
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL-----LYEMTKY 441
              +G V +AF+  + +  K     ++ Y  ++  + +K  +  +  +     + ++ + 
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQES 561

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +  D   +  LI GL  +G + E   +  VM+E+ Y+P  +  NA++ G
Sbjct: 562 NY--DEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMITG 608



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 224/483 (46%), Gaps = 2/483 (0%)

Query: 85  QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
            L  ++  G  PD    T+ +   C+A  +  A +V  +M   G +  A +YT L++ L 
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
             G V  AM +   M       +T  Y ++V GLC  G   ++   L+  +  G  PN  
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            Y+ L++       +  A+K+ + +      PN+ +Y  L+ GLCK G+ E A+  F  +
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G EPNVV+Y  L++  C EG  + A  LL  M+     P   T+++LI +L    K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + A   L  +VK   + +   Y  +I  LC  GK+D   + + +M      P+  +Y+ L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC   K+ +A  +++ +  K   +    Y  +I  L R+  +    ++  +M   G 
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD  TY+  +R  C EG +E+A  + V M +    P++  +N L+ G         +  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            F++M+ KG  PNE +YT+L+  +  +   + S ++ K   ++  + ES  + +V +   
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKD-LQESNYDEIVWKILI 572

Query: 564 EGI 566
            G+
Sbjct: 573 YGL 575



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 210/453 (46%), Gaps = 40/453 (8%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD      +++ LC+A + ++A  ++E  +S+G  P+   Y  L++  C  G + +A+++
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            E M+      N  TY  L+ GLC  G + +++    R+++ GL PN  TY+ L++    
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           E  +  A +LL  +   G  PN  +++VL+  LCK  + EEA  F   L  KG + N V 
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+  LC  G+ + A+EL+ +M      P   +Y+ LI  L    K   A  +L++M+
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           +   + S  +Y  II  L  E   +   K  D+M      P+  TY              
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYT------------- 461

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
                                  + S C +G+   A  ++ +M   G  P+  TY++LIR
Sbjct: 462 ---------------------VFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIR 500

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G    GL+ +A   F VM    +KP+ D++  LL  + K   +D S++++++   K    
Sbjct: 501 GYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQE 560

Query: 516 ---NETTYTILVEGIAHQDEL-ELSA--EVLKE 542
              +E  + IL+ G+  +  + E S+   V+KE
Sbjct: 561 SNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKE 593



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 3/275 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+ +A L L  +V KG K + V  T+L+  LCK  K+  A ++M+ M+S G +
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PDA SY+ L++ LC++  +  A  ++E M + G   + VTY  ++  L          + 
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D++I  G+ P+  TY+  + +  +E  +  A  ++  ++ +G  PNLV+YN L+ G   
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT--- 307
            G   +A   F  +  KG++PN  SY +LLR +  +   + + ++    D  D   +   
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYD 564

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            + + ILI  L   G       +L  M +  ++PS
Sbjct: 565 EIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 599


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 236/497 (47%), Gaps = 9/497 (1%)

Query: 75  RDHKLNDAFLQLERMVSKG--HKPDVVQATNLLYDLCKAN--KMKKAIKVMEMMVSSGII 130
           R  +L+ AF  + R+++ G  H+P+ +Q+++    LC A    M+  I V+  M   G  
Sbjct: 111 RLGRLDLAFATVGRVITTGLRHEPNPLQSSSQ-GPLCTAGGRAMRMDI-VLRRMPELGCK 168

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSL 188
           PD  SYT L+  LC       A+ L+  M D+    P + V Y +++ GL   G L+++ 
Sbjct: 169 PDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAY 228

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
              D ++ +G  P+  TYS ++ A  K + +  A ++   ++  G  P+ + Y  L+ G 
Sbjct: 229 SLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGY 288

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C  G+ +EAI  F+ +   G EP+VV+Y  L+  LC  G+  EA ++   +      P  
Sbjct: 289 CSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDS 348

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            TY  L+   A  G       +LD M+K   +     +N I+       KVD  +     
Sbjct: 349 TTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSN 408

Query: 369 MFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M  +   P+   Y   L +LC  G+V +A +   SL ++  +     +  +I  LC   K
Sbjct: 409 MRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDK 468

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +  +L +EM   G   D+  +++++  LC +G + EA  +F +M     +P+ + +N 
Sbjct: 469 WDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNT 528

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+ G C   + D ++++  +M+  G  P++ TY  ++ G +    +E    +L+E+  + 
Sbjct: 529 LIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKG 588

Query: 548 VVSESAVERLVMQYDFE 564
           V        +++Q  F+
Sbjct: 589 VNPGIVTYEMLLQGLFQ 605



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 190/404 (47%), Gaps = 1/404 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L+ A+   + M+ +G  PDVV  ++++  L K   M KA +V   MV +G++PD  
Sbjct: 220 REGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCI 279

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            YT LV+  C  G    A+ + +KM  +G   + VTY +L+  LC  G   ++ +  D L
Sbjct: 280 MYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL 339

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++G  P++ TY  LL     E  +     LLD ++ KG +     +N+++    K  + 
Sbjct: 340 VKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKV 399

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+  F ++  +G  P++V+Y  +L  LC  GR ++A      +     +P IV +  L
Sbjct: 400 DEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTL 459

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K D   ++  EM+          +N I+  LC +G+V       D M     
Sbjct: 460 IHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGI 519

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +PN  TYN L    C  GK+ EA  ++  +           Y  +I    + G+      
Sbjct: 520 EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLT 579

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           LL EM   G  P   TY  L++GL   G    A E+++ M ++D
Sbjct: 580 LLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWD 623



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 204/442 (46%), Gaps = 10/442 (2%)

Query: 76  DHKLNDAFLQLERMVS--KGHKP-DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           D K +   L L  +++  KG  P DVV  T ++  L +  ++ KA  + + M+  G  PD
Sbjct: 183 DDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPD 242

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +Y+ +++ L K   +  A Q+  +M   G   + + Y SLV G C  G   +++    
Sbjct: 243 VVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFK 302

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++ + G+ P+  TY+ L++   K      A K+ D ++ +G KP+  +Y  LL G   EG
Sbjct: 303 KMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEG 362

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              E       +  KG +     +N+++ +     + +EA  + + M     +P IV Y 
Sbjct: 363 ALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYG 422

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            ++  L   G+ D AL   + +      P+   +  +I  LC+  K D V +   +M  R
Sbjct: 423 TVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDR 482

Query: 373 RCKPNEGTYNG-LAMLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
               +   +N  +  LC  G+V EA   F ++  +G + N++    Y  +I   C  GK 
Sbjct: 483 GICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNT---YNTLIDGYCLDGKM 539

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A +LL  M   G  P   TY+++I G    G IE+ L +   M+     P +  +  L
Sbjct: 540 DEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEML 599

Query: 489 LLGLCKSRRTDLSLEVFQMMIE 510
           L GL ++ RT  + E++  MI+
Sbjct: 600 LQGLFQAGRTVAAKELYLRMIK 621



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 148/353 (41%), Gaps = 44/353 (12%)

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG---KPNLVSYNVLL 245
           Q  DRL+++G   + F  +  L    +      A+ L + +   G     PN+ +Y +++
Sbjct: 48  QVFDRLLKRGDRASIFDLNRALSDVARASPA-VAISLFNRMPRAGATSAAPNIATYGIVI 106

Query: 246 TGLCKE-GRTEEAIRFFRDLPSKGF--EPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
            G C+  GR + A      + + G   EPN +  +         GR    + +L  M   
Sbjct: 107 -GCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRMPEL 165

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV--KGRFRPSAASYNPIIARLCSEGKVD 360
              P + +Y IL+  L     +  AL +L  M   KGR      +Y  +I  L  EG++D
Sbjct: 166 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 225

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
                 D M  R   P+  TY+                                   +I+
Sbjct: 226 KAYSLFDAMLDRGPSPDVVTYSS----------------------------------IIS 251

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +L +     +A Q+   M K G  PD   Y+SL+ G C  G  +EA+ IF  M  +  +P
Sbjct: 252 ALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEP 311

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           DV  + AL+  LCK+ ++  + ++F  ++++G  P+ TTY  L+ G A +  L
Sbjct: 312 DVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGAL 364


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 212/426 (49%), Gaps = 13/426 (3%)

Query: 103 NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-ED 161
           +L+ +  +A   +++IKV  +M S G+ P   ++  L+  L K+G    A ++ ++M   
Sbjct: 154 SLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLST 213

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           YG   +T T+N L+RG CM G ++   +  + L + G  P+  TY+ L++   +   V  
Sbjct: 214 YGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTV 273

Query: 222 AMKLLDDIIAKGG--KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
           A  ++  +  K     PN+V+Y  L+ G C +   E+A+  F ++ ++G + N ++YN L
Sbjct: 274 AYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTL 333

Query: 280 LRSLCMEGRWEEANELLAEMDG-GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           ++ LC   ++E+  ++L    G G  SP   T+N L+    + G  D ALKV + M + +
Sbjct: 334 IKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELK 393

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-------CKPNEGTYNGL-AMLCGV 390
            +P +A+Y+ ++  LC  G  +     LD++  R+       CKP    YN +   LC  
Sbjct: 394 IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCET 453

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           GK ++A    + L  +    P   YK +I   C++G     ++LL  M +  F PD  TY
Sbjct: 454 GKTKKAEKAFRQLMRRGTQDPPS-YKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETY 512

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            SLI GL        AL+    M    ++P+   F+++L  L +  R   S  + Q+M++
Sbjct: 513 ESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLD 572

Query: 511 KGQMPN 516
           K    N
Sbjct: 573 KNIRQN 578



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 209/461 (45%), Gaps = 52/461 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM--VSSGIIPDASSY 136
           ++D F     +   G +PDVV    L+  LC+A K+  A  V++ M   S  + P+  +Y
Sbjct: 236 VDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTY 295

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC----------------- 179
           T L+   C K  +  A+ + E+M + G   N +TYN+L++GLC                 
Sbjct: 296 TTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAG 355

Query: 180 -------------------MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
                                GNL+ +L+  +R+ +  + P++ TYS L+ +  +     
Sbjct: 356 DGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYE 415

Query: 221 AAMKLLDDIIAK-------GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            A  LLD ++ +       G KP + +YN +   LC+ G+T++A + FR L  +G + + 
Sbjct: 416 KAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DP 474

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
            SY  L+   C EG +E   ELL  M   D  P   TY  LI  L +  K   AL+ L++
Sbjct: 475 PSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEK 534

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGK 392
           M++   RP++++++ I+A+L  +G+       +  M  +  + N     G + +L G G 
Sbjct: 535 MLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGM 594

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ-LLYEMTKYGFTPDSYTYS 451
             +AF ++  L  K  S   E    +I  LC   K  Q  + LL+ +  + F  D    +
Sbjct: 595 NDKAFQLVHLLYGKGYSVKME---ELIRYLCHCRKVIQGSKLLLFSLESHQFV-DMDLCN 650

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++I  LC    + EA  ++  + E      +   N L + L
Sbjct: 651 TVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSL 691



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 212/506 (41%), Gaps = 50/506 (9%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E + + G  PD      L+   C    +    ++   +   G  PD  +Y  LV+ LC+ 
Sbjct: 209 EMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRA 268

Query: 147 GNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           G V  A  +V+ M  +      N VTY +L+RG C    + ++L   + ++ +GL  N  
Sbjct: 269 GKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNI 328

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           TY+ L++   + R       +L+     G   P+  ++N L+   C  G  ++A++ F  
Sbjct: 329 TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-------MDGGDRSPTIVTYNILIG 316
           +     +P+  +Y+ L+RSLC  G +E+A +LL +       + G    P +  YN +  
Sbjct: 389 MSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFK 448

Query: 317 SLAYHGKTDHALKVLDE----------------------------------MVKGRFRPS 342
            L   GKT  A K   +                                  M++  F P 
Sbjct: 449 YLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPD 508

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQ 401
             +Y  +I  L    K  L ++ L++M     +PN  T++  LA L   G+  E+ ++IQ
Sbjct: 509 FETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQ 568

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC-ME 460
            + +K       F    +  L   G   +AFQL++ +   G+   S     LIR LC   
Sbjct: 569 LMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGY---SVKMEELIRYLCHCR 625

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            +I+ +  +   +E + +  D+D  N ++  LC+  +   +  ++  ++E G     +  
Sbjct: 626 KVIQGSKLLLFSLESHQF-VDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQ 684

Query: 521 TILVEGIAHQDELELSAEVLKELQLR 546
             L   +    +LE +  V K ++ R
Sbjct: 685 NQLKVSLKAGGKLEEAESVQKRMERR 710



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 185/418 (44%), Gaps = 51/418 (12%)

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY-----------------SFLLEAAYK 215
           ++++ L  L + +++LQF +   + G      +Y                 +FL     +
Sbjct: 81  TVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR 140

Query: 216 ERGV---------------------HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            RG+                       ++K+   + + G  P++V++N LLT L K GRT
Sbjct: 141 SRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRT 200

Query: 255 EEAIRFFRD-LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             A + + + L + G  P+  ++NIL+R  CM G  ++   +  ++      P +VTYN 
Sbjct: 201 NMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNT 260

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           L+  L   GK   A  V+  M K      P+  +Y  +I   C++ +++  +   ++M +
Sbjct: 261 LVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVN 320

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTY 429
           +  K N  TYN L   LC   K ++   I++        SP    +  ++   C  G   
Sbjct: 321 QGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLD 380

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG-------LIEEALEIFVVMEEYDYKPDV 482
            A ++   M++    PDS TYS+L+R LC  G       L+++ LE  +++     KP V
Sbjct: 381 DALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLV 440

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             +N +   LC++ +T  + + F+ ++ +G   +  +Y  L+ G   +   E   E+L
Sbjct: 441 AAYNPIFKYLCETGKTKKAEKAFRQLMRRGT-QDPPSYKTLIMGHCKEGTFESGYELL 497



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 3/157 (1%)

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM-TKYGFTPDSY 448
            G  QE+  +   + +   S     +  ++T L ++G+T  A ++  EM + YG TPD++
Sbjct: 162 AGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTF 221

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           T++ LIRG CM G++++   IF  +  +  +PDV  +N L+ GLC++ +  ++  V + M
Sbjct: 222 TFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGM 281

Query: 509 IEKGQ--MPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +K     PN  TYT L+ G   + E+E +  V +E+
Sbjct: 282 GKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEM 318


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 229/478 (47%), Gaps = 2/478 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + MVS G   +V+   +L+   C    +  A+++ + +V  G++PD   ++ L+N   K 
Sbjct: 314 DEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKV 373

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G++  A +L  +M+  G   N    NSL+ G      L  +    D  ++ G + N  TY
Sbjct: 374 GDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTY 432

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + LL+   +   V+ A  L + +++KG  P+LVSYN L+ G CK+G  ++A    + +  
Sbjct: 433 NILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILE 492

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G +PN V+Y +L+     +G  E A  +  +M   + +PT  T+N +I  L   G+   
Sbjct: 493 RGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSE 552

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
               L+  +K  F  ++ +YN II     EG VD  +    +M      P+  TY  L  
Sbjct: 553 TQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLID 612

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC   K+  A  +   +  K        Y  +I   C+      A +   E+   G TP
Sbjct: 613 GLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTP 672

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           ++  Y+S+I G      +E AL +   M +     D+  + +++ GL K  +  L+L+++
Sbjct: 673 NTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLY 732

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
             M+ K  +P+   YT+L+ G+++  +LE ++++LKE+    +     V  +++  +F
Sbjct: 733 SEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNF 790



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 223/471 (47%), Gaps = 4/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R + + DA    + MV +G   D      ++    K  K ++  K  +     G+  DA+
Sbjct: 197 RRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAA 256

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ LV  +C++ ++  A +L+++M ++G+  +  TY +++      GN  ++L+  D +
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GL  N      L++       V+ A++L D+++  G  P++V ++VL+ G  K G  
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNI 313
           E+A   +  +   G +PNV   N LL     +   E A  L  E ++ G     +VTYNI
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG--ITNVVTYNI 434

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L   GK + A  + ++MV     PS  SYN +I   C +G +D     L  +  R 
Sbjct: 435 LLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERG 494

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            KPN  TY  L       G  + AF + + +     +     +  VI  L + G+  +  
Sbjct: 495 LKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQ 554

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             L    K GF   S TY+S+I G   EG ++ AL  +  M E    PDV  + +L+ GL
Sbjct: 555 DKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGL 614

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           CKS +  L+LE+   M  KG   +   Y+ L++G     ++E +++   EL
Sbjct: 615 CKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTEL 665



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 188/383 (49%), Gaps = 7/383 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+N+A    E+MVSKG  P +V   NL+   CK   M KA  +++ ++  G+ P+A +YT
Sbjct: 444 KVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYT 503

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++   KKG+   A  + E+M          T+N+++ GL   G ++++   L+  I++
Sbjct: 504 LLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQ 563

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G V  + TY+ +++  +KE  V +A+    ++   G  P++++Y  L+ GLCK  +   A
Sbjct: 564 GFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLA 623

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +    D+  KG + +VV+Y+ L+   C     E A++   E+     +P  V YN +I  
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISG 683

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
             +    + AL +  EM+K +       Y  II  L  EGK+ L +    +M  +   P+
Sbjct: 684 FIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPD 743

Query: 378 EGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
              Y    NGL+     G+++ A  I++ +     +     Y  +I    R+G   +AF+
Sbjct: 744 IVMYTVLINGLS---NNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFR 800

Query: 434 LLYEMTKYGFTPDSYTYSSLIRG 456
           L  EM   G  PD  TY  L+ G
Sbjct: 801 LHDEMLDKGLVPDDTTYDILVNG 823



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 203/442 (45%), Gaps = 6/442 (1%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM   G +P+V    +LL    + N ++ A  + +  V  GI  +  +Y  L+  L + G
Sbjct: 385 RMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELG 443

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A  L EKM   G   + V+YN+L+ G C  G ++++   L  ++++GL PNA TY+
Sbjct: 444 KVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYT 503

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L++  +K+     A  + + ++A    P   ++N ++ GL K GR  E      +   +
Sbjct: 504 LLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQ 563

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF    ++YN ++     EG  + A     EM     SP ++TY  LI  L    K   A
Sbjct: 564 GFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLA 623

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
           L++  +M     +    +Y+ +I   C    ++   K   ++      PN   YN  +M+
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYN--SMI 681

Query: 388 CG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
            G   +  ++ A  + Q +   +     + Y  +I  L ++GK   A  L  EM      
Sbjct: 682 SGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIV 741

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD   Y+ LI GL   G +E A +I   M+  +  P V  +N L+ G  +      +  +
Sbjct: 742 PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRL 801

Query: 505 FQMMIEKGQMPNETTYTILVEG 526
              M++KG +P++TTY ILV G
Sbjct: 802 HDEMLDKGLVPDDTTYDILVNG 823



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 126/545 (23%), Positives = 245/545 (44%), Gaps = 43/545 (7%)

Query: 13  NPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLAST-----QVTISPKDSVYTKPNRKPG 67
           N +  P +    F SQI     F+  + F   + ST     ++ ISP+     K NR   
Sbjct: 10  NLTSIPQKNIRPFLSQI----FFTTQQHFPEKIPSTPNFPEKIIISPESQPSEKKNRFLV 65

Query: 68  NNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS 127
                +         F Q+ER   K      V   +LL  +  +N   K    ++ ++++
Sbjct: 66  TLLSHKSNPKSALKFFHQVER---KRGFVKTVDFISLLIHILSSNS--KTCSSLQFLLNN 120

Query: 128 GIIPDAS-SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
            +  DA+ S    V CL            +E    YG+ +++  +N L++    +  +  
Sbjct: 121 YVFGDATPSAKVFVECL------------LECSGRYGFESDSRVFNYLLKSFVRVNKITD 168

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
           +++    +++  LVP     + LL A  +   V  A +L D+++ +G   +  + +V++ 
Sbjct: 169 AVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMR 228

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
              KEG+ EE  +FF++   +G E +  +Y+IL++++C       A ELL EM      P
Sbjct: 229 ACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVP 288

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           +  TY  +I +    G    AL++ DEMV      +      ++   C  G V+L ++  
Sbjct: 289 SKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLF 348

Query: 367 DQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAI---IQSLGNKQNSSPQEFYKYVITSL 422
           D++      P+   ++ L   C  VG +++A+ +   ++ +G + N        +++ SL
Sbjct: 349 DEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNV-------FIVNSL 401

Query: 423 C----RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
                 +     A+ L  E  ++G T +  TY+ L++ L   G + EA  ++  M     
Sbjct: 402 LEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGI 460

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P + ++N L+LG CK    D +  + + ++E+G  PN  TYT+L++G   + + E +  
Sbjct: 461 TPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFV 520

Query: 539 VLKEL 543
           V +++
Sbjct: 521 VFEQM 525



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 124/245 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  ++ A L    M   G  PDV+  T+L+  LCK+NK+  A+++   M   G+ 
Sbjct: 577 DGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMK 636

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y+ L++  CK  ++  A +   ++ D G   NTV YNS++ G   L N+  +L  
Sbjct: 637 LDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNL 696

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +I+  +  +   Y+ ++    KE  +  A+ L  ++++K   P++V Y VL+ GL  
Sbjct: 697 HQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSN 756

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E A +  +++      P+V+ YNIL+     EG  +EA  L  EM      P   T
Sbjct: 757 NGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTT 816

Query: 311 YNILI 315
           Y+IL+
Sbjct: 817 YDILV 821



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 82/178 (46%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H +  A      ++  G  P+ V   +++      N M+ A+ + + M+ + +  D   Y
Sbjct: 653 HDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVY 712

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T ++  L K+G +  A+ L  +M       + V Y  L+ GL   G L  + + L  +  
Sbjct: 713 TSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDG 772

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + P+   Y+ L+   ++E  +  A +L D+++ KG  P+  +Y++L+ G  K   T
Sbjct: 773 NNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KL+ A      M+SK   PD+V  T L+  L    +++ A K+++ M  + I P   
Sbjct: 721 KEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVL 780

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
            Y  L+    ++GN+  A +L ++M D G   +  TY+ LV G
Sbjct: 781 VYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 58/121 (47%)

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           +YGF  DS  ++ L++       I +A+E F  M E+D  P V   N LL  + +     
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
            + +++  M+E+G   +  T  +++     + + E   +  KE + R +  ++A   +++
Sbjct: 203 DARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILV 262

Query: 560 Q 560
           Q
Sbjct: 263 Q 263


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 233/525 (44%), Gaps = 39/525 (7%)

Query: 75  RDHKLNDAFLQL-ERMVSKGHKPDVVQATNLLYDL-CKANKMKKAIKVMEMMVSSGIIPD 132
           R+ K  D  L    +MV+    P  V+  NLL+ +  K      AI +++ M   G+ P 
Sbjct: 59  RNAKSVDVALDFYHKMVTMKPFP-CVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPT 117

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +   ++NCLC+  +  +   ++  M   G   + VT+N++V GLC+ GN+ Q+++F+D
Sbjct: 118 VHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVD 177

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            L   G   +++T   +     K     AA+  L  +  K    ++ +Y+ ++ GLCK+G
Sbjct: 178 HLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDG 237

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              EA+  F  +  KG +P++ +YN L+  LC   RW+EA  LLA M      P + T+N
Sbjct: 238 MVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFN 297

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ++ G     G    A  +   MV         +Y  II   C   ++   ++  D M  +
Sbjct: 298 VIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISK 357

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C PN  TY  L    C    + +A   +  + N         +  +I  +C+ GK   A
Sbjct: 358 GCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAA 417

Query: 432 FQLLYEMTKYGFTPDSYTYS----------------SLIR-------------------G 456
            +L   M K+G  P+  T +                SL R                   G
Sbjct: 418 KELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDG 477

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           +C  G + +ALE+F  +     K DV  +N ++ GLCK    D + ++   M E G  PN
Sbjct: 478 MCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPN 537

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           E TY + V+G+  + ++  S + L  ++ +   +++   + ++ Y
Sbjct: 538 ECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINY 582



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 1/336 (0%)

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            L++    + V  A+     ++     P +  +N+L + + K      AI   + +   G
Sbjct: 54  FLDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIG 113

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +P V + NI++  LC          +L  M      P+IVT+N ++  L   G    A+
Sbjct: 114 VKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAI 173

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           + +D +    +   + +   I   LC  G     +  L +M  + C  +   Y+G+   L
Sbjct: 174 RFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGL 233

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G V EA  +   +  K        Y  +I  LC   +  +A  LL  M + G  PD 
Sbjct: 234 CKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDV 293

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            T++ +       G+I  A  IF  M     + DV  + +++   C   +   ++EVF +
Sbjct: 294 QTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDL 353

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           MI KG +PN  TYT L+ G      +  +   L E+
Sbjct: 354 MISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEM 389


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 216/465 (46%), Gaps = 5/465 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K +DAF     M+     P +V  T +L  + K NK    I +   M + GI  D  S+T
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++C C+   +  A+ L+ KM   G+  + VT  SL+ G C      +++  +D +   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G VPN   Y+ ++    K R ++ A+++   +  KG + + V+YN L++GL   GR  +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            R  RD+  +  +PNV+ +  L+ +   EG   EA  L  EM      P + TYN LI  
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              HG    A  + D MV     P   +YN +I   C   +V+  +K   +M ++    +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L    C  GK+  A  +   + +   S     Y  ++  LC  GK  +A  ++ 
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           ++ K     D  TY+ +I+GLC    ++EA  +F  +     KPD   +  ++ GLC+  
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
               + ++ + M E G MP+E  Y    +         LSAE++K
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLSAELIK 519



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 2/289 (0%)

Query: 69  NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG 128
           N   ++RD  LN+A      M  KG + D V    L+  L  + +   A +++  MV   
Sbjct: 192 NGLCKNRD--LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK 249

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           I P+   +T L++   K+GN+  A  L ++M       N  TYNSL+ G C+ G L  + 
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
              D ++ KG  P+  TY+ L+    K + V   MKL  ++  +G   +  +YN L+ G 
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C+ G+   A + F  +   G  P++V+YNILL  LC  G+ E+A  ++ ++   +    I
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 429

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +TYNI+I  L    K   A  +   + +   +P A +Y  +I+ LC +G
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 174/379 (45%), Gaps = 3/379 (0%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            + +      ++Q   +P+   ++ +L    K       + L   +   G   +L S+ +
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+   C+  R   A+     +   GF P++V+   LL   C   R++EA  L+  MDG  
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +V YN +I  L  +   ++AL+V   M K   R  A +YN +I+ L + G+     
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
           + L  M  R+  PN   +  L       G + EA  + + +  +++  P  F Y  +I  
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM-IRRSVVPNVFTYNSLING 298

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            C  G    A  +   M   G  PD  TY++LI G C    +E+ +++F  M       D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              +N L+ G C++ + +++ +VF  M++ G  P+  TY IL++ + +  ++E +  +++
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 542 ELQLRQVVSESAVERLVMQ 560
           +LQ  ++  +     +++Q
Sbjct: 419 DLQKSEMDVDIITYNIIIQ 437



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 122/242 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  ++  L +A    + M+ +   P+V    +L+   C    +  A  + ++MVS G  
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+   CK   V   M+L  +M   G   +  TYN+L+ G C  G LN + + 
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            +R++  G+ P+  TY+ LL+       +  A+ +++D+       ++++YN+++ GLC+
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             + +EA   FR L  KG +P+ ++Y  ++  LC +G   EA++L   M      P+   
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501

Query: 311 YN 312
           Y+
Sbjct: 502 YD 503


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 231/513 (45%), Gaps = 39/513 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+N A     +M+ +  KP V   T L+   C+  +  +A +V+  M  +G+ P   +Y+
Sbjct: 349 KINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYS 408

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK   +G A+ L++ +       N   Y  L+ G C LG ++++ Q L  ++  
Sbjct: 409 ALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLAD 468

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+  TYS L+    K   +H   ++L  +   G  PN V Y  L+   CK G  +EA
Sbjct: 469 GIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEA 528

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +++F D+   G   N V +N LL S   EG   EA +    M     S  + ++N +I S
Sbjct: 529 LKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDS 588

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A  V D MV+  + P   +Y  ++  LC  G +    + +  +  + C  +
Sbjct: 589 YCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAID 648

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
           E T N L + +C  G + EA  + + +  + N  P  + Y  ++   C++GK   A  LL
Sbjct: 649 EKTLNTLLVGICKHGTLDEALDLCEKMVTR-NILPDTYTYTILLDGFCKRGKVVPALILL 707

Query: 436 YEMTKYGFTPDSYTYSSLIRGL-----------------CMEGL---------------- 462
             M + G  PD+  Y+ L+ GL                 C EGL                
Sbjct: 708 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 767

Query: 463 ---IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
              I E   +   M E +  P   ++N L+ G  K  +   +L +++ M+++G  P+  T
Sbjct: 768 GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 827

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           Y +L+ G+     +E++ + L+++ L  V  ++
Sbjct: 828 YRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 860



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 227/473 (47%), Gaps = 7/473 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A   L++M      P+ V    +L    K  + K A+++++ M  +GI  D  +Y 
Sbjct: 245 KLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYN 303

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK      A  L+++M +     +  +YN+L+ G    G +N ++   ++++++
Sbjct: 304 IMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQ 363

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            L P+  TY+ L++   +      A ++L ++   G +P+ ++Y+ LL G CK  +   A
Sbjct: 364 SLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPA 423

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +   + L S+    N   Y IL+   C  G   +A ++L  M      P ++TY+ LI  
Sbjct: 424 LDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALING 483

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           +   G      ++L  M K    P+   Y  ++   C  G     +K    ++      N
Sbjct: 484 MCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVAN 543

Query: 378 EGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
              +N  A+LC     G + EA    Q +   + S     +  +I S C++G   +AF +
Sbjct: 544 SVIHN--ALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 601

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M ++G+ PD  TY SL+RGLC  G + +A E  V + E     D    N LL+G+CK
Sbjct: 602 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 661

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
               D +L++ + M+ +  +P+  TYTIL++G   + ++ + A +L ++ L +
Sbjct: 662 HGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV-VPALILLQMMLEK 713



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/552 (24%), Positives = 245/552 (44%), Gaps = 88/552 (15%)

Query: 86   LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP-------------- 131
            L RM   G  P+ V  T L++  CKA   K+A+K    +  SG++               
Sbjct: 497  LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYR 556

Query: 132  ---------------------DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
                                 D +S+  +++  C++GNV  A  + + M  +G+P +  T
Sbjct: 557  EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICT 616

Query: 171  YNSLVRGLCMLGNLNQSLQFL-----------------------------------DRLI 195
            Y SL+RGLC  G+L Q+ +F+                                   ++++
Sbjct: 617  YGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMV 676

Query: 196  QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
             + ++P+ +TY+ LL+   K   V  A+ LL  ++ KG  P+ ++Y  LL GL  EG+ +
Sbjct: 677  TRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVK 736

Query: 256  EAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   F+++  K G   + ++YN ++      G+  E   L+  M   +  P+  +YNIL
Sbjct: 737  AASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 796

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
            +      G+    L +  +MVK   +P   +Y  +I  LC  G +++ VK L++M     
Sbjct: 797  MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV 856

Query: 375  KPNEGTYNGL-----------------AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
             P+   ++ L                 + +  VG +  AF + + +        +     
Sbjct: 857  FPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESS 916

Query: 418  VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            ++  LC+ GK  +A  +   + + G  P   T+++L+ GLC E  I++A  +  +ME   
Sbjct: 917  IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCG 976

Query: 478  YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             K DV  +N L+ GLC  +    +L++++ M  KG +PN TTY  L   +     ++   
Sbjct: 977  LKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGE 1036

Query: 538  EVLKELQLRQVV 549
            ++LK+++ R +V
Sbjct: 1037 KLLKDIEDRGIV 1048



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 193/417 (46%), Gaps = 3/417 (0%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S   LVN   K+G V  A   +  M++ G+  +  + N+++  L  +        FL   
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKES 221

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +    +  T + +L +   +  +  A  +L   +     PN V+YN +L    K+GR 
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQK-MKNCRLPNAVTYNTILNWYVKKGRC 280

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+R   D+   G E ++ +YNI++  LC   R   A  LL  M   + +P   +YN L
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTL 340

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK + A+ + ++M++   +PS A+Y  +I   C  G+ D   + L +M     
Sbjct: 341 IHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGV 400

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +P+E TY+ L    C   K+  A  +I+ L ++  S  +  Y  +I   C+ G+  +A Q
Sbjct: 401 RPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQ 460

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +L  M   G  PD  TYS+LI G+C  G+I E  EI   M++    P+   +  L+   C
Sbjct: 461 ILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFC 520

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           K+     +L+ F  +   G + N   +  L+    +++ +   AE  K+   R  +S
Sbjct: 521 KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSF-YREGMIAEAEQFKQYMSRMKIS 576



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 172/377 (45%), Gaps = 9/377 (2%)

Query: 173 SLVRGLCMLG-NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV---HAAMKLLDD 228
           S++R L + G + +     L R I +    N F+   L+ A  KE  V    AA+  +D+
Sbjct: 129 SVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDE 188

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
               G K +L S N +L  L    ++E    F ++   + F  +V + NI+L SLC +G+
Sbjct: 189 C---GFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGK 245

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             +A  +L +M    R P  VTYN ++      G+   AL++LD+M K        +YN 
Sbjct: 246 LSKAESMLQKMKNC-RLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNI 304

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I +LC   +       L +M      P+E +YN L     G GK+  A  I   +  + 
Sbjct: 305 MIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQS 364

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                  Y  +I   CR G+T +A ++LYEM   G  P   TYS+L+ G C    +  AL
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPAL 424

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++   +       +   +  L+ G C+      + ++ + M+  G  P+  TY+ L+ G+
Sbjct: 425 DLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGM 484

Query: 528 AHQDELELSAEVLKELQ 544
                +  + E+L  +Q
Sbjct: 485 CKMGMIHETKEILSRMQ 501



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 162/349 (46%), Gaps = 26/349 (7%)

Query: 222 AMKLLDDIIAKGGKPNLVS-YNVLLTGLCKEGRTEEAIRFFRDLPSKGFE---------- 270
           A+++LD I+ + G   +   Y + +  L +     +A+   R L   GF           
Sbjct: 91  ALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLR 150

Query: 271 -------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
                   N+ S ++L+ +   EG+  +A   +  MD      ++ + N ++ +L    K
Sbjct: 151 TISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINK 210

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-PNEGTYN 382
           +++    L E +  +F     + N ++  LC++GK+      L +M  + C+ PN  TYN
Sbjct: 211 SEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYN 268

Query: 383 G-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLLYEMT 439
             L      G+ + A  I+  +  ++N    + Y Y  +I  LC+  ++ +A+ LL  M 
Sbjct: 269 TILNWYVKKGRCKSALRILDDM--EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMR 326

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           +   TPD  +Y++LI G   EG I  A+ IF  M     KP V  + AL+ G C++ RTD
Sbjct: 327 EVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTD 386

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            +  V   M   G  P+E TY+ L+ G     +L  + +++K L+ R +
Sbjct: 387 EARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSI 435



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 18/293 (6%)

Query: 82   AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            +++  E +  +G   D +   +++    K  ++ +  ++M  M  + + P ++SY  L++
Sbjct: 739  SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMH 798

Query: 142  CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
               KKG +   + L   M   G   + VTY  L+ GLC  G +  +++FL++++ +G+ P
Sbjct: 799  GYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFP 858

Query: 202  NAFTYSFLLEAAYKERG-----------------VHAAMKLLDDIIAKGGKPNLVSYNVL 244
            +   +  L++A + E+                  +  A +L +D+ A G  P+ V+ + +
Sbjct: 859  DNLAFDILIKA-FSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSI 917

Query: 245  LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
            + GLCK G+ EEAI  F  +   G  P + ++  L+  LC E + ++A  L   M+    
Sbjct: 918  VRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGL 977

Query: 305  SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
               +VTYN+LI  L        AL + +EM      P+  +Y  +   + + G
Sbjct: 978  KVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATG 1030



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 6/181 (3%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            ++ AF   E M + G  P  V  ++++  LCK  K+++AI V   ++ +G++P  +++T 
Sbjct: 892  IDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTT 951

Query: 139  LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            L++ LCK+  +  A  L + ME  G   + VTYN L+ GLC    +  +L   + +  KG
Sbjct: 952  LMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKG 1011

Query: 199  LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
            L+PN  TY  L  A Y    +    KLL DI  +G  P+      L      E R E AI
Sbjct: 1012 LLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESL------EWRMENAI 1065

Query: 259  R 259
            +
Sbjct: 1066 K 1066



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 61/125 (48%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K+ +A +    ++  G  P +   T L++ LCK  K+  A  + ++M S G+  D  +Y 
Sbjct: 926  KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 985

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+  LC K  +  A+ L E+M+  G   N  TY +L   +   G +    + L  +  +
Sbjct: 986  VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 1045

Query: 198  GLVPN 202
            G+VP+
Sbjct: 1046 GIVPS 1050



 Score = 45.4 bits (106), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 47/89 (52%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            ++ K++DAF   + M S G K DVV    L+  LC    +  A+ + E M S G++P+ +
Sbjct: 958  KEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNIT 1017

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
            +Y  L   +   G +    +L++ +ED G
Sbjct: 1018 TYITLTGAMYATGTMQDGEKLLKDIEDRG 1046


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 225/460 (48%), Gaps = 29/460 (6%)

Query: 79  LNDAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII----PDA 133
           +ND   +L ERM  KG  PDVV   + +  LC+A K+ +A ++   M   G +    P+ 
Sbjct: 234 MNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNV 293

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            ++  ++   C++G +  A  LVE M+  G   +  +YN+ + GL   G L +    LD 
Sbjct: 294 VTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDE 353

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++ G+ PN ++Y+ +++   +   +  A +L+D +++ G  P+ V+Y  LL G C +G+
Sbjct: 354 MVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGK 413

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA     ++  KG  PN  + N LL SL  EGR  EA E+L +M+        VT NI
Sbjct: 414 VFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNI 473

Query: 314 LIGSLAYHGKTDHALKVLDEMVK------GRFRPSAA----------------SYNPIIA 351
           ++  L  +G+ + A +V+ EM        G+  P A                 +Y  +I 
Sbjct: 474 VVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLIN 533

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
            LC  GK++   K   +M  +   P+  TY+   +  C  GK+  A  +++ +     S 
Sbjct: 534 GLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSK 593

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
             + Y  +I  L  KG+ ++ + L+ EM + G  PD  TY+++I  LC  G  ++A  + 
Sbjct: 594 TLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLL 653

Query: 471 VVM-EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
             M ++    P+V +F  L+   CKS    ++ E+F + +
Sbjct: 654 HEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVAL 693



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 220/487 (45%), Gaps = 64/487 (13%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M+ +G+ P+  ++  L+  LC+   + +A +L +KM + G   N  T   LVRG C  G 
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
             Q+L+F+D   + G   N   Y+ L+ +  K+     A KL++ +  KG  P++V++N 
Sbjct: 202 TKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNS 259

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGF----EPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            ++ LC+ G+  EA R FRD+   G     +PNVV++N++L+  C EG  EEA  L+  M
Sbjct: 260 RISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETM 319

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL------ 353
             G    ++ +YN  +  L  +GK      VLDEMV+    P+  SYN ++  L      
Sbjct: 320 KKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMM 379

Query: 354 -----------------------------CSEGKVDLVVKCLDQMFHRRCKPNEGTYNG- 383
                                        CS+GKV      L++M  + C PN  T N  
Sbjct: 380 LDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTL 439

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L  L   G+  EA  ++Q +  K           V+  LCR G+  +A +++ EM   G 
Sbjct: 440 LNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGT 499

Query: 444 T----------------------PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
                                  PD  TY++LI GLC  G +EEA + F+ M   +  PD
Sbjct: 500 NSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPD 559

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
              ++  +L  CK  +   +L V + M   G      TY  L+ G+  + ++     ++ 
Sbjct: 560 SVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMD 619

Query: 542 ELQLRQV 548
           E++ R +
Sbjct: 620 EMRERGI 626



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 198/425 (46%), Gaps = 27/425 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+H + DA   ++ MVS G  PD V  T LL+  C   K+ +A  ++  M+  G  P+  
Sbjct: 375 RNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTY 434

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L+N L K+G    A ++++KM +  Y  +TVT N +V GLC  G L ++ + +  +
Sbjct: 435 TCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEM 494

Query: 195 IQKGL----------------------VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
              G                       VP+  TY+ L+    K   +  A K   +++AK
Sbjct: 495 WTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAK 554

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
              P+ V+Y+  +   CK+G+   A+R  +D+   G    + +YN L+  L  +G+  E 
Sbjct: 555 NLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEM 614

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIA 351
             L+ EM      P I TYN +I  L   GKT  A  +L EM+ KG   P+ +S+  +I 
Sbjct: 615 YGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIK 674

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNS 409
             C  G   +  +  D      C   E  Y+ +   +L G GK+ +A  + ++   +   
Sbjct: 675 AFCKSGDFKVACELFDVAL-SVCGHKEALYSLMFNELLAG-GKLSDAKELFEASLERSLL 732

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           S    Y+ +I  LC+ G+   A  LL ++   G+  D  ++  +I GL   G  ++A E+
Sbjct: 733 SKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792

Query: 470 FVVME 474
             +ME
Sbjct: 793 GRIME 797



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 7/330 (2%)

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
           H    L  D+I  G  P   ++N+L+  LC+    + A   F  +  KG +PN  +  IL
Sbjct: 133 HYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGIL 192

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           +R  C  GR ++A E +    GG+ +   V YN L+ S       D A K+++ M +   
Sbjct: 193 VRGFCRAGRTKQALEFVDGKMGGNVNR--VVYNTLVSSFCKQDMNDEAEKLVERMTEKGL 250

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR----CKPNEGTYN-GLAMLCGVGKVQ 394
            P   ++N  I+ LC  GKV    +    M         KPN  T+N  L   C  G ++
Sbjct: 251 LPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMME 310

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA ++++++    N    E Y   +  L R GK  +   +L EM + G  P+ Y+Y+ ++
Sbjct: 311 EARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVM 370

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            GLC   ++ +A  +  +M      PD   +  LL G C   +   +  +   MI KG  
Sbjct: 371 DGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCH 430

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
           PN  T   L+  +  +     + E+L+++ 
Sbjct: 431 PNTYTCNTLLNSLWKEGRKSEAEEMLQKMN 460


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 235/489 (48%), Gaps = 6/489 (1%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           + RD ++    + L+ M   G +P+V   T  +  L +A K+ +A ++   M   G  PD
Sbjct: 239 KKRDSEM--VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPD 296

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +YT L++ LC  G +  A +L  KM+  G+  + V Y +L+      G+L+   +F  
Sbjct: 297 LVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWS 356

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++   G +P+  T++ L++   K R    A    D +  +G  PNL +YN L+ GL + G
Sbjct: 357 QMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAG 416

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R E+A++    + S G +P   +YNI +      G   +A E   +M      P IV  N
Sbjct: 417 RIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACN 476

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
             + SLA  G+   A  + + + +    P + +YN ++      G+VD  V  L +M   
Sbjct: 477 ASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C+P+    N L   L   G+V EA+ +   + + + S     Y  +++ L ++G+  +A
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA 596

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   M +   +P++ ++++L+   C    +E AL++F  M   D KPDV  +N ++ G
Sbjct: 597 IELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL--QLRQVV 549
           L K  + + +   F  + +K   P+  T   L+ G+    ++  +  + ++   Q+R  V
Sbjct: 657 LIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRV 715

Query: 550 SESAVERLV 558
           + S  E L+
Sbjct: 716 NRSFWEDLM 724



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 232/483 (48%), Gaps = 7/483 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+++A+    RM  +G  PD+V  T L+  LC A +++ A ++   M ++G  PD  
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++     G++    +   +ME  GY  + VT+  LV  LC   + +++    D +
Sbjct: 334 IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G++PN  TY+ L+    +   +  A+KLL  + + G +P   +YN+ +    K G T
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGET 453

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+  F  + +KG  PN+V+ N  L SL   GR  EA  +   +     +P  VTYN++
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+ D A+ +L EM++    P     N +I  L   G+VD   +  D+M   + 
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 375 KPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            P   TYN L  L G+GK   VQ+A  + +S+  K+ S     +  ++   C+  +   A
Sbjct: 574 SPTVVTYNTL--LSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELA 631

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++  +MT     PD  TY+++I GL  E  +  A   F  +++    PD      LL G
Sbjct: 632 LKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPG 690

Query: 492 LCKSRRTDLSLEVFQ-MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           L K  +   ++ + +  M +     N + +  L+ G   + E++ +    +EL L  +  
Sbjct: 691 LVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICR 750

Query: 551 ESA 553
           E +
Sbjct: 751 EDS 753



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 229/542 (42%), Gaps = 75/542 (13%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQAT---NLLYDLCKA-NKMKKAIKVMEMMVSSGIIPDAS 134
           + D    L    S    P V+  T   N + +  +  +K++    V E M    I  D  
Sbjct: 99  MTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLD 158

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +   L  +G +     ++ KM   G+  N  +YN L+  L   G   ++L+   R+
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +GL P+  TYS L+ A  K+R     M LL ++   G +PN+ ++ + +  L + G+ 
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--------------- 299
           +EA   FR +  +G  P++V+Y +L+ +LC  G+ E A EL  +M               
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 300 -----DGGDRS---------------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
                D GD                 P +VT+ IL+  L      D A    D M K   
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----------------- 382
            P+  +YN +I  L   G+++  +K L  M     +P   TYN                 
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVE 458

Query: 383 -------------------GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
                               L  L  +G+++EA  +   L     +     Y  ++    
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + G+  +A  LL EM + G  PD    +SLI  L   G ++EA ++F  M++    P V 
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +N LL GL K  R   ++E+F+ MIEK   PN  ++  L++     DE+EL+ ++  ++
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638

Query: 544 QL 545
            +
Sbjct: 639 TV 640



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 225/505 (44%), Gaps = 39/505 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A      +   G  PD V    ++    K  ++ +A+ ++  M+ +G  PD     
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L K G V  A Q+ ++M+D       VTYN+L+ GL   G + ++++  + +I+K
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEK 606

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  +++ LL+   K   V  A+K+   +     KP++++YN ++ GL KE +   A
Sbjct: 607 KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGR-----------------------WEE--- 291
             FF  L  K   P+ V+   LL  L   G+                       WE+   
Sbjct: 667 FWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMG 725

Query: 292 ANELLAEMDGGDRSPTIVTYN----------ILIGSLAYHGKTDHALKVLDEMVKGR-FR 340
              + AEMD        +  N           L+  L  H +  +A ++ D+  K     
Sbjct: 726 GTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGIS 785

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAI 399
           P+ ASYN +I  L      +        M +  C P+  T+N L  + G  GK+ E F +
Sbjct: 786 PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFEL 845

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            + + +++       Y  VI+SL +     +A    Y++    F P   TY  LI GL  
Sbjct: 846 YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G +EEA+ +F  M +Y  KP+   FN L+ G  K   T+ + ++F+ M+ +G  P+  +
Sbjct: 906 VGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965

Query: 520 YTILVEGIAHQDELELSAEVLKELQ 544
           YTILV+ +     ++ +     EL+
Sbjct: 966 YTILVDCLCLAGRVDEALYYFNELK 990



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 227/513 (44%), Gaps = 39/513 (7%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D+ ++  ++++A+   +RM      P VV    LL  L K  +++KAI++ E M+     
Sbjct: 550  DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCS 609

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  S+  L++C CK   V  A+++  KM       + +TYN+++ GL     +N +  F
Sbjct: 610  PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWF 669

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII-------------------- 230
              +L +K + P+  T   LL    K   +  A+ +  D +                    
Sbjct: 670  FHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728

Query: 231  --AKGGKPNLVSYNVLLTGLCKEG--------------RTEEAIRFFRDLPSK-GFEPNV 273
              A+  K  + +  ++L G+C+E               R   A + F     K G  P +
Sbjct: 729  VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788

Query: 274  VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
             SYN L+  L      E+A +L  +M     +P   T+N+L+      GK     ++  E
Sbjct: 789  ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKE 848

Query: 334  MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
            M+  R +P A +YN +I+ L     +D  +     +     +P   TY  L   L  VG+
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 393  VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            ++EA  + + + +         +  +I    + G T  A QL   M   G  PD  +Y+ 
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 453  LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
            L+  LC+ G ++EAL  F  ++     PD   +N ++ GL KS+R + +L ++  M  +G
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 513  QMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
             +P+  TY  L+  +     +E +  + +ELQL
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 216/478 (45%), Gaps = 4/478 (0%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++ ++  A     +M     KPDV+    ++Y L K NK+  A      +  S + 
Sbjct: 620  DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MH 678

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEK-MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  +   L+  L K G +G A+ +    M    +  N   +  L+ G  +   +++++ 
Sbjct: 679  PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAII 738

Query: 190  FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-GGKPNLVSYNVLLTGL 248
            F + L+  G+         L+    K +    A ++ D    K G  P L SYN L+  L
Sbjct: 739  FAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGEL 798

Query: 249  CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
             +   TE+A   F+D+ + G  P+  ++N+LL      G+  E  EL  EM      P  
Sbjct: 799  LEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858

Query: 309  VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            +TYNI+I SLA     D AL    ++V   FRP+  +Y P+I  L   G+++  ++  ++
Sbjct: 859  ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918

Query: 369  MFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
            M    CKPN   +N L    G +G  + A  + + + N+      + Y  ++  LC  G+
Sbjct: 919  MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978

Query: 428  TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              +A     E+   G  PD   Y+ +I GL     +EEAL ++  M      PD+  +N+
Sbjct: 979  VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNS 1038

Query: 488  LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            L+L L  +   + +  +++ +   G  P+  TY  L+ G +  +  E +  V K + +
Sbjct: 1039 LMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV 1096



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 224/470 (47%), Gaps = 9/470 (1%)

Query: 81  DAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D F +   +M + G+ PDVV  T L+  LCKA    +A    ++M   GI+P+  +Y  L
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  L + G +  A++L+  ME  G      TYN  +      G   ++++  +++  KG+
Sbjct: 409 ICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGI 468

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           VPN    +  L +  +   +  A  + + +   G  P+ V+YN+++    K G+ +EA+ 
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              ++   G EP+V+  N L+ SL   GR +EA ++   M     SPT+VTYN L+  L 
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLG 588

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G+   A+++ + M++ +  P+  S+N ++   C   +V+L +K   +M    CKP+  
Sbjct: 589 KEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVL 648

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           TYN +   L    KV  AF     L  K++  P       ++  L + G+   A  +  +
Sbjct: 649 TYNTVIYGLIKENKVNHAFWFFHQL--KKSMHPDHVTICTLLPGLVKCGQIGDAISIARD 706

Query: 438 -MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF-NALLLGLCKS 495
            M +  F  +   +  L+ G  +E  +++A+ IF      +     D+F   L+  LCK 
Sbjct: 707 FMYQVRFRVNRSFWEDLMGGTLVEAEMDKAI-IFAEELVLNGICREDSFLIPLVRVLCKH 765

Query: 496 RRTDLSLEVFQMMIEK-GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +R   + ++F    +K G  P   +Y  L+  +      E + ++ K+++
Sbjct: 766 KRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK 815



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 139/272 (51%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            +  K+ + F   + M+S+  KPD +    ++  L K+N + KA+     +VSS   P   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +Y  L++ L K G +  AM+L E+M DYG   N   +N L+ G   +G+   + Q   R+
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + +G+ P+  +Y+ L++       V  A+   +++ + G  P+ ++YN ++ GL K  R 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EEA+  + ++ ++G  P++ +YN L+ +L + G  E+A  +  E+      P + TYN L
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            I   +     +HA  V   M+     P+  +Y
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 140/308 (45%)

Query: 77   HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            H    A+   + M + G  PD      LL    K+ K+ +  ++ + M+S    PDA +Y
Sbjct: 802  HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITY 861

Query: 137  TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              +++ L K  N+  A+     +    +     TY  L+ GL  +G L ++++  + +  
Sbjct: 862  NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSD 921

Query: 197  KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             G  PN   ++ L+    K      A +L   ++ +G +P+L SY +L+  LC  GR +E
Sbjct: 922  YGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDE 981

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            A+ +F +L S G +P+ ++YN ++  L    R EEA  L  EM      P + TYN L+ 
Sbjct: 982  ALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLML 1041

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            +L   G  + A ++ +E+      P   +YN +I         +        M    C P
Sbjct: 1042 NLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNP 1101

Query: 377  NEGTYNGL 384
            N GTY  L
Sbjct: 1102 NIGTYAQL 1109



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 173/392 (44%), Gaps = 36/392 (9%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TY ++ + L + G L Q    L+++ + G V NA++Y+ L+    +      A+++   +
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +++G KP+L +Y+ L+  L K+  +E  +   +++   G  PNV ++ I +R L   G+ 
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           +EA E+   MD     P +VTY +LI +L   G+ ++A ++  +M     +P    Y  +
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQN 408
           + +    G +D   +   QM      P+  T+  L  +LC      EAFA          
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV------ 392

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                                        M K G  P+ +TY++LI GL   G IE+AL+
Sbjct: 393 -----------------------------MRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   ME    +P    +N  +    KS  T  ++E F+ M  KG +PN       +  +A
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483

Query: 529 HQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
               L  +  +   L+   +  +S    ++M+
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMK 515



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 35/382 (9%)

Query: 108  LCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT 166
            LCK  +   A ++ +      GI P  +SY  L+  L +      A  L + M++ G   
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821

Query: 167  NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
            +  T+N L+      G + +  +    +I +   P+A TY+ ++ +  K   +  A+   
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 227  DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             D+++   +P   +Y  L+ GL K GR EEA+R F ++   G +PN   +NIL+      
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 287  GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            G  E A +L   M      P + +Y IL+  L   G+ D AL   +E+      P   +Y
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 347  NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
            N II  L    +++  +   ++M +R   P+  TYN L +  G+                
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA--------------- 1046

Query: 407  QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                               G   QA ++  E+   G  PD +TY++LIRG  +    E A
Sbjct: 1047 -------------------GMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHA 1087

Query: 467  LEIFVVMEEYDYKPDVDNFNAL 488
              ++  M      P++  +  L
Sbjct: 1088 YTVYKNMMVDGCNPNIGTYAQL 1109


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 229/458 (50%), Gaps = 28/458 (6%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           ++V    ++   CK   +++A +++E M   G+ P+  ++   ++ LCK G V  A ++ 
Sbjct: 206 NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIF 265

Query: 157 EKMED---YGYP-TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + M++   +G P  + VT++ ++ G C  G ++++   +D +   G +    +Y+  L  
Sbjct: 266 QDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSG 325

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             +   V  A +LL ++  +G +PN  +YN++++GLCKEG+  +A R    + S    P+
Sbjct: 326 LVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPD 385

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV+Y  LL + C +G    AN +L EM     +P   TYN+L+ SL   G+T  A ++L+
Sbjct: 386 VVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLE 445

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH--------------------- 371
            M +  +    A  N II  LC   ++D+ +  +D M+                      
Sbjct: 446 RMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSS 505

Query: 372 --RRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +RC P++ TY+ L + LC  G+  EA   +  +  K  S     Y   I   C+ GKT
Sbjct: 506 ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A ++L +M K G  P + TY+ LIRG   +   EE +++   M+E    P+V  +N+L
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSL 625

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           +   C+    + ++ +   M++   +PN T++ +L++ 
Sbjct: 626 IKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKA 663



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 227/499 (45%), Gaps = 44/499 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G +PDV     LL  LC A +M+ A +V + M +     +  S+  L    C+ G    A
Sbjct: 140 GAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPAR----NEFSFGILARGYCRAGRSIDA 195

Query: 153 MQLVEKMEDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           +++++     G P+ N V  N++V G C  G + ++ + ++R+  +GL PN  T++  + 
Sbjct: 196 LKVLD-----GMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARIS 250

Query: 212 AAYKERGVHAAMKLLDDIIAKGG----KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           A  K   V  A ++  D+         +P+ V+++V+L+G C  G  +EA      +   
Sbjct: 251 ALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCG 310

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           GF   V SYN  L  L   GR  EA ELL EM      P   TYNI++  L   GK   A
Sbjct: 311 GFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDA 370

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
            +V + +  G   P   +Y  ++   CS+G +    + LD+M  + C PN  TYN L   
Sbjct: 371 RRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQS 430

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG---- 442
           L   G+  EA  +++ +  K  S        +I  LCR  +   A  ++  M + G    
Sbjct: 431 LWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGAL 490

Query: 443 -------------------FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
                                PD  TYS LI  LC EG  +EA +  + M   D  PD  
Sbjct: 491 GRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSV 550

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            ++  + G CK  +T L+++V + M +KG  P+  TY +L+ G    +E   S E++K  
Sbjct: 551 IYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGF---EEKHKSEEIMK-- 605

Query: 544 QLRQVVSESAVERLVMQYD 562
            L   + E  +   VM Y+
Sbjct: 606 -LMSEMKEKGISPNVMTYN 623



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 185/392 (47%), Gaps = 30/392 (7%)

Query: 85  QLERMVSKG-HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           ++E  +  G   PDVV  T+LL+  C    +  A ++++ M   G  P++ +Y  L+  L
Sbjct: 372 RVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSL 431

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG----- 198
            + G    A +L+E+M + GY  +T   N ++ GLC    L+ ++  +D + ++G     
Sbjct: 432 WRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALG 491

Query: 199 ------------------LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
                              +P+  TYS L+ A  KE     A K L ++I K   P+ V 
Sbjct: 492 RLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVI 551

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y+  + G CK G+T  AI+  RD+  KG  P+  +YN+L+R    + + EE  +L++EM 
Sbjct: 552 YDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMK 611

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
               SP ++TYN LI S    G  + A+ +LDEM++    P+  S++ +I   C      
Sbjct: 612 EKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFP 671

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYV 418
                 D    R C   E  Y  +   L   GK  EA  I++ +  +   S Q F YK +
Sbjct: 672 SAQMVFDAAL-RTCGQKEVLYCLMCTELTTYGKWIEAKNILE-MALEMRVSIQSFPYKQI 729

Query: 419 ITSLCRKGKTYQAFQLLYEMT--KYGFTPDSY 448
           I+ LC  G+   A  LL  +   ++ F P ++
Sbjct: 730 ISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAF 761



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 195/445 (43%), Gaps = 55/445 (12%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P  T  YN L+        L+        L+  G  P+ FT + LL+A      +  A +
Sbjct: 107 PPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQR 166

Query: 225 LLD----------DIIAKG---------------GKP--NLVSYNVLLTGLCKEGRTEEA 257
           + D           I+A+G               G P  NLV  N ++ G CKEG  EEA
Sbjct: 167 VFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEA 226

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----DGGDRSPTIVTYNI 313
            R    +  +G  PNVV++N  + +LC  GR  +A  +  +M      G   P  VT+++
Sbjct: 227 ERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDV 286

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           ++      G  D A  ++D M  G F     SYN  ++ L   G+V    + L +M H  
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            +PN  TYN + + LC  GK  +A  +   + +   S     Y  ++ + C KG    A 
Sbjct: 347 IQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAAN 406

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++L EM + G  P+S+TY+ L++ L   G   EA  +   M E  Y  D    N ++ GL
Sbjct: 407 RILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGL 466

Query: 493 CKSRRTDLSLEVFQMMIEKGQ-----------------------MPNETTYTILVEGIAH 529
           C++ R D+++++   M E+G                        +P++ TY+IL+  +  
Sbjct: 467 CRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCK 526

Query: 530 QDELELSAEVLKELQLRQVVSESAV 554
           +   + + + L E+ ++ +  +S +
Sbjct: 527 EGRFDEAKKKLLEMIVKDISPDSVI 551



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 199/421 (47%), Gaps = 35/421 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDA 133
           R+ ++ +A   L  M  +G +P+      ++  LCK  K   A +V E  + SG++ PD 
Sbjct: 328 RNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDV 386

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +YT L++  C KGN+  A +++++M   G   N+ TYN L++ L   G   ++ + L+R
Sbjct: 387 VTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLER 446

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK------------------ 235
           + +KG   +    + +++   +   +  AM ++D +  +G                    
Sbjct: 447 MNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSI 506

Query: 236 -----PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
                P+ ++Y++L++ LCKEGR +EA +   ++  K   P+ V Y+  +   C  G+  
Sbjct: 507 SQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTS 566

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            A ++L +M+    +P+  TYN+LI       K++  +K++ EM +    P+  +YN +I
Sbjct: 567 LAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLI 626

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL----AMLCGVGKVQEAF-AIIQSLGN 405
              C +G V+  +  LD+M      PN  +++ L      +      Q  F A +++ G 
Sbjct: 627 KSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQ 686

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K     +  Y  + T L   GK  +A  +L    +   +  S+ Y  +I GLC  G ++ 
Sbjct: 687 K-----EVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDH 741

Query: 466 A 466
           A
Sbjct: 742 A 742



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 6/300 (2%)

Query: 78  KLNDAFLQL--ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           +L ++FL +  +  +S+   PD +  + L+  LCK  +  +A K +  M+   I PD+  
Sbjct: 492 RLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVI 551

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y   ++  CK G    A++++  ME  G   +T TYN L+RG        + ++ +  + 
Sbjct: 552 YDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMK 611

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +KG+ PN  TY+ L+++  ++  V+ AM LLD+++     PN+ S+++L+   CK     
Sbjct: 612 EKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFP 671

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            A   F D   +      V Y ++   L   G+W EA  +L        S     Y  +I
Sbjct: 672 SAQMVF-DAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQII 730

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK---VDLVVKCLDQMFHR 372
             L   G+ DHA  +L  ++  R     A++ P+I  L   GK   VD++   + +M  R
Sbjct: 731 SGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMMEMADR 790



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 19/333 (5%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P    YN L+    +E R +     ++DL   G +P+V + N+LL++LC  GR E A  +
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA--ASYNPIIARL 353
              M   +      ++ IL       G++  ALKVLD M      PS      N ++A  
Sbjct: 168 FDAMPARNE----FSFGILARGYCRAGRSIDALKVLDGM------PSMNLVVCNTVVAGF 217

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLG-NKQNSSP 411
           C EG V+   + +++M  +   PN  T+N  ++ LC  G+V +A+ I Q +  + Q+  P
Sbjct: 218 CKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLP 277

Query: 412 ---QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
              Q  +  +++  C  G   +A  L+  M   GF     +Y+  + GL   G + EA E
Sbjct: 278 RPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQE 337

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGI 527
           +   M     +P+   +N ++ GLCK  +        +  I  G M P+  TYT L+   
Sbjct: 338 LLREMAHEGIQPNSYTYNIIVSGLCKEGKA-FDARRVENFIRSGVMSPDVVTYTSLLHAY 396

Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
             +  +  +  +L E+  +     S    +++Q
Sbjct: 397 CSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQ 429


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 222/485 (45%), Gaps = 45/485 (9%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT   ++++   ++    M   G +P+V     LL  LCK NK+  A K++  M + G  
Sbjct: 153 DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 212

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A SYT +++ +C+ G V    QL E+ E    P  +V YN+L+ GLC   +    ++ 
Sbjct: 213 PNAVSYTTVISSMCEVGMVKEGRQLAERFE----PVVSV-YNALINGLCKERDYKGGVEL 267

Query: 191 LDRLIQKGLVPNAFTYS---------------FLLEAAYKERGVHAAMKLLDDIIAK--- 232
           +  +++KG+ PN  +YS               F L A   +RG H  +  L  ++     
Sbjct: 268 MSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFV 327

Query: 233 ------------------GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
                             G +PN+V+YN L+ G C  G  ++A+  F  +   G  PN+ 
Sbjct: 328 RGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIR 387

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y  L+      G  E A  +  +M      P +V Y  ++ +L  H K   A  +++ M
Sbjct: 388 TYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIM 447

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNGLA-MLCGVGK 392
            K    PS  ++N  I  LC  G++D   K   QM  + RC PN  TYN L   L    +
Sbjct: 448 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANR 507

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++EA+ + + +  +        Y  ++   C  G    A QL+ +M   G +PD  T + 
Sbjct: 508 IEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNM 567

Query: 453 LIRGLCMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +I   C +G  E A+++   V      ++PDV ++  ++ GLC+S   +  + +F+ MI 
Sbjct: 568 IILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMIS 627

Query: 511 KGQMP 515
           +  +P
Sbjct: 628 ERIIP 632



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 197/436 (45%), Gaps = 41/436 (9%)

Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           ++A+++   +   G  P    Y ++++ L  +  +     +   M+  G+  N  TYN L
Sbjct: 127 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 186

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           ++ LC    ++ + + L  +  KG  PNA +Y+ ++ +  +   V    +L     A+  
Sbjct: 187 LKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL-----AERF 241

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P +  YN L+ GLCKE   +  +    ++  KG  PNV+SY+ L+  L   G+ E A  
Sbjct: 242 EPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFS 301

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG-RFRPSAASYNPIIARL 353
           LLA+M      P I T + L+      G T  AL + ++M++G   +P+  +YN ++   
Sbjct: 302 LLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGF 361

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
           CS G +D  V     M    C PN  TY  L                             
Sbjct: 362 CSHGNIDKAVSVFLHMEEIGCSPNIRTYGSL----------------------------- 392

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
                I    ++G    A  +  +M   G  P+   Y+S++  LC     +EA  +  +M
Sbjct: 393 -----INGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIM 447

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDE 532
            + +  P V  FNA + GLC + R D + +VF+ M ++ +  PN  TY  L++G+A  + 
Sbjct: 448 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANR 507

Query: 533 LELSAEVLKELQLRQV 548
           +E +  + +E+ +R V
Sbjct: 508 IEEAYGLTREIFMRGV 523



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 184/406 (45%), Gaps = 40/406 (9%)

Query: 69  NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG 128
           N   + RD+K       +  MV KG  P+V+  + L+ +L  + +++ A  ++  M+  G
Sbjct: 253 NGLCKERDYK--GGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRG 310

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
             P+  + + LV     +G    A+ +  +M   +G   N V YN+LV+G C  GN++++
Sbjct: 311 CHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKA 370

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           +     + + G  PN  TY  L+    K   +  A+ + + ++  G  PN+V Y  ++  
Sbjct: 371 VSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEA 430

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS-P 306
           LC+  + +EA      +  +   P+V ++N  ++ LC  GR + A ++  +M+   R  P
Sbjct: 431 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPP 490

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            IVTYN L+  LA   + + A  +  E+       S ++YN ++   C+ G   + ++ +
Sbjct: 491 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLV 550

Query: 367 DQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            +M      P+E T N                                   +I + C++G
Sbjct: 551 GKMMVNGKSPDEITMN----------------------------------MIILAYCKQG 576

Query: 427 KTYQAFQL--LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           K  +A Q+  L    +  + PD  +Y+++I GLC     E+ + +F
Sbjct: 577 KAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILF 622



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 124/246 (50%), Gaps = 16/246 (6%)

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           T +T+ ++I  LA  G+ D    +L +M    F  S   +  +I+     G  +  V   
Sbjct: 74  TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV--- 130

Query: 367 DQMFHR----RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVIT 420
            +MF+R     C P+   YN  L  L G  ++Q  + + + +  +    P  F Y  ++ 
Sbjct: 131 -EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM-KRDGFEPNVFTYNVLLK 188

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +LC+  K   A +LL EM+  G  P++ +Y+++I  +C  G+++E  ++        ++P
Sbjct: 189 ALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL-----AERFEP 243

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            V  +NAL+ GLCK R     +E+   M+EKG  PN  +Y+ L+  +++  ++EL+  +L
Sbjct: 244 VVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLL 303

Query: 541 KELQLR 546
            ++  R
Sbjct: 304 AQMLKR 309



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 82/175 (46%)

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G+V     ++Q +  +     ++ +  VI+   + G   +A ++ Y + ++G  P    Y
Sbjct: 89  GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 148

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + ++  L  E  I+    ++  M+   ++P+V  +N LL  LCK+ + D + ++   M  
Sbjct: 149 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 208

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
           KG  PN  +YT ++  +     ++   ++ +  +    V  + +  L  + D++G
Sbjct: 209 KGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKG 263


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 199/414 (48%), Gaps = 41/414 (9%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           LQ+E M ++G  P +V    +++ L K+ +++ A      M + G++PD  +Y  ++N  
Sbjct: 336 LQME-MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGY 394

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK GN+  A+ L+  +   G     +TYN+L+ G C LG L ++ +  + ++++G  P+ 
Sbjct: 395 CKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDV 454

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE---GRTEEAIRF 260
            TY+ L+  ++K R +  A +  D++++KG +P+  +YN   T +C E   G T +A + 
Sbjct: 455 CTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN---TRICAELILGDTHKAFQL 511

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +  KG  P+ V+YN+++  LC  G  ++A +L  +M      P  +TY  LI +   
Sbjct: 512 REVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCE 571

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G    A K+L+ MV    +PS  +Y  +I   C  G +        +M     +PNE T
Sbjct: 572 RGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEIT 631

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           YN L                                  I +LCR G+T  A+   +EM +
Sbjct: 632 YNVL----------------------------------IHALCRTGRTLLAYHHFHEMLE 657

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
            G  P+ YTY+ LI G C EG   +A+ ++  M +    PD    NAL  G  K
Sbjct: 658 RGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK 711



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 204/438 (46%), Gaps = 10/438 (2%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVS--SGIIPDASSYTYLVNCLCKKGNVGYA 152
           +P +V    LL    K  +  +A  +++ M +   G + +  +Y  +++ L ++G++  A
Sbjct: 240 EPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENA 299

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            +LV+ M       ++ TYN L+  L   G + +       +  +G++P   TY+ ++  
Sbjct: 300 AKLVDSMR-LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHG 358

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K   V AA     ++ A G  P+L++YN +L G CK G  +EA+    DL   G  P 
Sbjct: 359 LLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPT 418

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V++YN L+   C  G  EEA  L  EM      P + TY IL+           A +  D
Sbjct: 419 VLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFD 478

Query: 333 EMVKGRFRPSAASYNPIIARLCSE---GKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLC 388
           EM+    +P   +YN    R+C+E   G      +  + M  +   P+  TYN +   LC
Sbjct: 479 EMLSKGLQPDCFAYN---TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLC 535

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             G +++A  +   + +         Y  +I + C +G   +A +LL  M   G  P   
Sbjct: 536 KTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVV 595

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY+ LI   C  G +  A   F  M +   +P+   +N L+  LC++ RT L+   F  M
Sbjct: 596 TYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEM 655

Query: 509 IEKGQMPNETTYTILVEG 526
           +E+G  PN+ TYT+L++G
Sbjct: 656 LERGLAPNKYTYTLLIDG 673



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 177/383 (46%), Gaps = 34/383 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++  A L+   M + G  PD++   ++L   CKA  +K+A+ ++  +  +G+ P   
Sbjct: 361 KSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVL 420

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  C+ G +  A +L E+M + G   +  TY  L+ G   + NL  + +F D +
Sbjct: 421 TYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEM 480

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KGL P+ F Y+  + A       H A +L + ++ KG  P+ V+YNV++ GLCK G  
Sbjct: 481 LSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNL 540

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A      + S G +P+ ++Y  L+ + C  G   EA +LL  M      P++VTY IL
Sbjct: 541 KDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTIL 600

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G    A     +M+     P+  +YN +I  LC  G+  L      +M  R  
Sbjct: 601 IHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGL 660

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            PN+ TY  L                                  I   CR+G    A +L
Sbjct: 661 APNKYTYTLL----------------------------------IDGNCREGNWADAIRL 686

Query: 435 LYEMTKYGFTPDSYTYSSLIRGL 457
            +EM + G  PD  T+++L +G 
Sbjct: 687 YFEMHQNGIPPDYCTHNALFKGF 709



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 208/465 (44%), Gaps = 12/465 (2%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           +   G  PDV     +L  L  A +      V   M+   I P   +Y  L++   K+G 
Sbjct: 199 VACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGR 258

Query: 149 VGYAMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLD--RLIQKGLVPNAF 204
              A  L+++ME  G     N VTYN ++  L   G+L  + + +D  RL +K    ++F
Sbjct: 259 KDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA---SSF 315

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+ L+ A  +   V     L  ++  +G  P LV+YN ++ GL K  + E A   F ++
Sbjct: 316 TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM 375

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            + G  P++++YN +L   C  G  +EA  LL ++     +PT++TYN LI      G  
Sbjct: 376 RAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGL 435

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + A ++ +EMV+    P   +Y  ++        + +  +  D+M  +  +P+   YN  
Sbjct: 436 EEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN-- 493

Query: 385 AMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             +C    +G   +AF + + +  K        Y  +I  LC+ G    A  L  +M   
Sbjct: 494 TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSD 553

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD  TY+ LI   C  GL+ EA ++   M     +P V  +  L+   C+      +
Sbjct: 554 GLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSA 613

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
              F+ M++ G  PNE TY +L+  +       L+     E+  R
Sbjct: 614 YGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLER 658



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 178/413 (43%), Gaps = 35/413 (8%)

Query: 116 KAIKVMEM-MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
           + ++ ++M M + GI+P   +Y  +++ L K   V  A     +M   G   + +TYNS+
Sbjct: 331 QKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSM 390

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           + G C  GNL ++L  L  L + GL P   TY+ L++   +  G+  A +L ++++ +G 
Sbjct: 391 LNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGC 450

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P++ +Y +L+ G  K      A  FF ++ SKG +P+  +YN  + +  + G   +A +
Sbjct: 451 FPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQ 510

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L   M      P  VTYN++I  L   G    A  +  +MV    +P   +Y  +I   C
Sbjct: 511 LREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHC 570

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
             G +    K L+ M     +P+  TY  L   C                          
Sbjct: 571 ERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTC-------------------------- 604

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
                   CR+G  Y A+    +M   G  P+  TY+ LI  LC  G    A   F  M 
Sbjct: 605 --------CRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEML 656

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           E    P+   +  L+ G C+      ++ ++  M + G  P+  T+  L +G 
Sbjct: 657 ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 204/437 (46%), Gaps = 37/437 (8%)

Query: 94  HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           H+P       LL  L  A ++  A +  +  +   + PD  ++  +++ LCK G +  A 
Sbjct: 146 HRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAG 205

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ---FLDRLIQKGLVPNAFTYSFLL 210
            + + +  +G   + VTYN+++ G C  G   +       L  +++ G+ PN  T++ L+
Sbjct: 206 DVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLV 265

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
               K+    AA+++ +++  +G   ++V+Y+ L+ GLC EG+ EE ++   ++   G  
Sbjct: 266 NGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           PN+ + N +L   C +G   +A   +  M+  +  P +VTY IL+       K   AL V
Sbjct: 326 PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAV 385

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV 390
            + M     RP+A  YN +IA     G    V   LD+M  +  + +  TYN L      
Sbjct: 386 KEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVL------ 439

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
                                       I +LC KG+  +A +LL EM   G  P   TY
Sbjct: 440 ----------------------------IGALCVKGEVRKAVKLLDEMLMVGLEPVHLTY 471

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           +++I G C +G I+ A EI   ME+   + +V  +N  +  LC+  + + + E+   M+E
Sbjct: 472 NTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLE 531

Query: 511 KGQMPNETTYTILVEGI 527
           KG +PN  TY  + EG+
Sbjct: 532 KGLVPNGVTYDTIKEGM 548



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 176/397 (44%), Gaps = 53/397 (13%)

Query: 93  GHKPDVVQATNLLYDLCK---ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           G  P VV    ++   CK   A +M     +++ MV +GI P+  ++  LVN  CK  N 
Sbjct: 215 GLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNT 274

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             A+++ E+M+  G   + VTY++LV GLC  G + + ++ +D +   GLVPN  T + +
Sbjct: 275 AAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSV 334

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           L    K+  +  A   +D +  K  KPN+V+Y +L+ G  +  + ++A+     +  KG 
Sbjct: 335 LNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGV 394

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            PN   YN L+      G W   + LL EM        IVTYN+LIG+L   G+   A+K
Sbjct: 395 RPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVK 454

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
           +LDEM+     P   +YN II   C +G +    +   +M   + + N  TYN       
Sbjct: 455 LLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYN------- 507

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
                                        I  LCR GK  +  +LL EM + G  P+  T
Sbjct: 508 ---------------------------VFIKCLCRMGKMEETNELLNEMLEKGLVPNGVT 540

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           Y ++  G                M E  Y PDV  F 
Sbjct: 541 YDTIKEG----------------MMEKGYTPDVRGFT 561



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 150/297 (50%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ MV  G  P+ V    L+   CK +    A++V E M   GI     +Y+ LV  LC 
Sbjct: 246 LKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCS 305

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G V   ++LV++M+D G   N  T NS++ G C  G +  +  ++D + QK + PN  T
Sbjct: 306 EGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVT 365

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++   +   +  A+ + + +  KG +PN   YN L+ G  + G          ++ 
Sbjct: 366 YTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMR 425

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG   ++V+YN+L+ +LC++G   +A +LL EM      P  +TYN +I      G   
Sbjct: 426 MKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIK 485

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
            A ++   M KG+ R +  +YN  I  LC  GK++   + L++M  +   PN  TY+
Sbjct: 486 SAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYD 542



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 142/275 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D     A    E M  +G    VV  + L++ LC   K+++ +K+++ M   G++P+ +
Sbjct: 270 KDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLA 329

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   ++N  CKKG +  A   ++ ME      N VTY  LV G   L  +  +L   + +
Sbjct: 330 TLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAM 389

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG+ PNA  Y+ L+    +     +   LLD++  KG + ++V+YNVL+  LC +G  
Sbjct: 390 SGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEV 449

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A++   ++   G EP  ++YN ++   C +G  + A E+   M+ G +   +VTYN+ 
Sbjct: 450 RKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVF 509

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           I  L   GK +   ++L+EM++    P+  +Y+ I
Sbjct: 510 IKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTI 544



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 174/378 (46%), Gaps = 4/378 (1%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           + N L+  L     ++ + +     +++ + P+ FT++ ++    K   +  A  +  DI
Sbjct: 152 SVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDI 211

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIR---FFRDLPSKGFEPNVVSYNILLRSLCME 286
            A G  P++V+YN ++ G CK GR           +++   G  PN V++N+L+   C +
Sbjct: 212 RAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKD 271

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
                A  +  EM     + ++VTY+ L+  L   GK +  +K++DEM      P+ A+ 
Sbjct: 272 SNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATL 331

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGN 405
           N ++   C +G +      +D M  +  KPN  TY  L      + K+++A A+ +++  
Sbjct: 332 NSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSG 391

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           K        Y  +I    R G       LL EM   G   D  TY+ LI  LC++G + +
Sbjct: 392 KGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRK 451

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A+++   M     +P    +N ++ G C+      + E+   M +  +  N  TY + ++
Sbjct: 452 AVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIK 511

Query: 526 GIAHQDELELSAEVLKEL 543
            +    ++E + E+L E+
Sbjct: 512 CLCRMGKMEETNELLNEM 529



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 4/348 (1%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+AF+ + LL A      V  A +     + +   P+L ++N++++GLCK G+  +A   
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGR---WEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +D+ + G  P+VV+YN ++   C  GR       + LL EM     SP  VT+N+L+  
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                 T  A++V +EM +     S  +Y+ ++  LCSEGKV+  VK +D+M      PN
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T N  L   C  G + +A   I S+  K        Y  ++    R  K   A  +  
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            M+  G  P++  Y+ LI G    G       +   M     + D+  +N L+  LC   
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               ++++   M+  G  P   TY  ++ G   +  ++ + E+   ++
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRME 495



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 141/321 (43%), Gaps = 39/321 (12%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           +P+  S N LL+ L    R + A R F+    +   P++ ++NI++  LC  G+  +A +
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTD---HALKVLDEMVKGRFRPSAASYNPIIA 351
           +  ++     +P++VTYN +I      G+     H   +L EMV+    P+  ++N ++ 
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
             C +      V+  ++M  +    +  TY+ L   LC  GKV+E               
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEE--------------- 311

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
                                 +L+ EM   G  P+  T +S++ G C +G++ +A    
Sbjct: 312 --------------------GVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWI 351

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             ME+ + KP+V  +  L+ G  +  +   +L V + M  KG  PN   Y  L+ G    
Sbjct: 352 DSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRN 411

Query: 531 DELELSAEVLKELQLRQVVSE 551
            +    + +L E++++ V ++
Sbjct: 412 GDWRSVSGLLDEMRMKGVRAD 432



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 39/236 (16%)

Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEA 396
           R RPSA S N +++ L +  +VDL  +       RR  P+  T+N  ++ LC  G++++A
Sbjct: 145 RHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKA 204

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT---YQAFQLLYEMTKYGFTPDS------ 447
             + + +     +     Y  +I   C++G+    Y    LL EM + G +P+       
Sbjct: 205 GDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVL 264

Query: 448 -----------------------------YTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
                                         TYS+L+ GLC EG +EE +++   M++   
Sbjct: 265 VNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGL 324

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            P++   N++L G CK      +      M +K   PN  TYTILV+G    D+++
Sbjct: 325 VPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMK 380



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 1/191 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K+ DA    E M  KG +P+      L+    +    +    +++ M   G+ 
Sbjct: 371 DGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVR 430

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D  +Y  L+  LC KG V  A++L+++M   G     +TYN+++ G C  GN+  + + 
Sbjct: 431 ADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEI 490

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             R+ +     N  TY+  ++   +   +    +LL++++ KG  PN V+Y+ +  G+ +
Sbjct: 491 RTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMME 550

Query: 251 EGRTEEAIRFF 261
           +G T + +R F
Sbjct: 551 KGYTPD-VRGF 560



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 4/114 (3%)

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           +PD +T++ +I GLC  G + +A ++   +  +   P V  +N ++ G CK  R      
Sbjct: 182 SPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYH 241

Query: 504 V---FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           V    + M+E G  PNE T+ +LV G         +  V +E++ +Q ++ S V
Sbjct: 242 VDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMK-QQGIAASVV 294


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 233/468 (49%), Gaps = 24/468 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ AF  + +++  G +P+VV  T L+   C  +KM  A+ + + MV+  I  D   Y 
Sbjct: 104 QMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYG 163

Query: 138 YLVNCLCKK--GNVGYAMQLVEKMEDYGY-PTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            L+N LCK   G    A+QL++KME+      N + YN++V GLC  GN+N++     ++
Sbjct: 164 TLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKM 223

Query: 195 IQKGLVPNAFTYSFLLEAAYK----------------ERGVHAAMKLLDDIIAKGGKPNL 238
           I +G+ P+ FTYS L+    +                   V  A +L + +I +G + ++
Sbjct: 224 IVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDI 283

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           ++YN+L+ G C   +  EA + F  +  +G +P+ ++Y IL+   C+  + +EA  L   
Sbjct: 284 INYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHG 343

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M      P + +YNILI       +   A+ +L++M      P+  +YN ++  LC  G 
Sbjct: 344 MIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGG 403

Query: 359 VDLVVKCLDQMFHRRCKP--NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF- 414
           +    K +D+M H  C+P  +  TYN L   LC +  V++A A  + L  +++ +P  + 
Sbjct: 404 ILDAWKLVDEM-HYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWS 462

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I+  C+  +  +A  L   M      PD  TY+ L+  L     +++A+ + V + 
Sbjct: 463 YNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIV 522

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +    P++  +N L+ GL K  R   + ++   +  +G  P+  TY I
Sbjct: 523 DQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTYII 570



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 230/488 (47%), Gaps = 24/488 (4%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA     RMV     P +V+ T +L  + K      AI +  +M   G++P   ++  
Sbjct: 35  IDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNI 94

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NC C  G + +A  ++ K+  +G   N VT+ +L++G C+   +  +L   D ++ + 
Sbjct: 95  LINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARR 154

Query: 199 LVPNAFTYSFLLEAAYKER--GVHAAMKLLDDIIAKG-GKPNLVSYNVLLTGLCKEGRTE 255
           +  +   Y  L+    K +     AA++LL  +  +   KPNL+ YN ++ GLCK+G   
Sbjct: 155 IRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNIN 214

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG----------------RWEEANELLAEM 299
           EA      +  +G  P++ +Y+ L+  LC  G                + +EA EL   M
Sbjct: 215 EARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVM 274

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                   I+ YNIL+     + K   A K+   MV+   +P   +Y  ++   C   KV
Sbjct: 275 IERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKV 334

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           D        M  R   P+  +YN L    C   +V EA  +++ +  K        Y  V
Sbjct: 335 DEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSV 394

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFT--PDSYTYSSLIRGLCMEGLIEEALEIFV-VMEE 475
           +  LC+ G    A++L+ EM  Y     PD  TY+ L+  LC    +E+A+  F  ++ E
Sbjct: 395 VDGLCKSGGILDAWKLVDEM-HYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFE 453

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
             + P+V ++N L+ G CK+RR D ++ +F  M  K  +P+  TY IL++ + +  +L+ 
Sbjct: 454 RSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDK 513

Query: 536 SAEVLKEL 543
           +  +L ++
Sbjct: 514 AIALLVQI 521



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 216/482 (44%), Gaps = 28/482 (5%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           CK + +  A+ +   MV    +P    +T ++  + K      A+ L   ME  G    T
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           VT+N L+   C +G ++ +   + ++++ G  PN  T++ L++       +  A+ + D+
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 229 IIAKGGKPNLVSYNVLLTGLCKE--GRTEEAIRFFRDLPSKGF-EPNVVSYNILLRSLCM 285
           ++A+  + + V Y  L+ GLCK   G+   A++  + +  +   +PN++ YN ++  LC 
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG----------------KTDHALK 329
           +G   EA  L ++M      P I TY+ LI  L   G                K D A +
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LC 388
           + + M++   +    +YN ++   C   KV    K    M  R  +P+  TY  L    C
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
            + KV EA  +   +  +        Y  +I   C+  +  +A  LL +M      P+  
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDY----KPDVDNFNALLLGLCKSRRTDLSLEV 504
           TY+S++ GLC  G I +A ++   ++E  Y     PDV  +N LL  LC+    + ++  
Sbjct: 390 TYNSVVDGLCKSGGILDAWKL---VDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAF 446

Query: 505 FQMMI-EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
           F+ +I E+   PN  +Y IL+ G      L+ +  +   +  + +V +     +++   F
Sbjct: 447 FKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALF 506

Query: 564 EG 565
            G
Sbjct: 507 NG 508



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 162/337 (48%), Gaps = 53/337 (15%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA----------------NKMKKAI 118
           +D  +N+A +   +M+ +G  PD+   ++L+Y LC+A                NK+ +A 
Sbjct: 209 KDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEAR 268

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           ++  +M+  G   D  +Y  L+N  C    VG A +L   M + G   +T+TY  L+ G 
Sbjct: 269 ELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGY 328

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
           C++  ++++      +I++GLVP+ ++Y+ L++   K   V  AM LL+D+  K   PN+
Sbjct: 329 CLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNI 388

Query: 239 VSYNVLLTGLCKEGR------------------------------------TEEAIRFFR 262
           ++YN ++ GLCK G                                      E+AI FF+
Sbjct: 389 ITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFK 448

Query: 263 DLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            L   + F PNV SYNIL+   C   R +EA  L   M   +  P IVTYNIL+ +L   
Sbjct: 449 HLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNG 508

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
            + D A+ +L ++V     P+  +YN +I  L   G+
Sbjct: 509 QQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGR 545



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 163/360 (45%), Gaps = 22/360 (6%)

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
           ++  K   +  A+ L   ++     P++V +  +L  + K      AI  +  +  KG  
Sbjct: 27  QSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVV 86

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P  V++NIL+   C  G+ + A  ++ ++      P +VT+  L+     + K   AL +
Sbjct: 87  PFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYI 146

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSE--GKVDLVVKCLDQMFHRR-CKPNEGTYNGLAM- 386
            DEMV  R R     Y  +I  LC    GK    V+ L +M  R+  KPN   YN +   
Sbjct: 147 YDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHG 206

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKG----------------KTY 429
           LC  G + EA  ++ S    Q   P  F Y  +I  LCR G                K  
Sbjct: 207 LCKDGNINEA-RVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVD 265

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +A +L   M + G   D   Y+ L+ G C+   + EA ++F +M E   +PD   +  L+
Sbjct: 266 EARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILM 325

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            G C   + D +  +F  MIE+G +P+  +Y IL++G    + +  +  +L+++ L+ +V
Sbjct: 326 HGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLV 385


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 218/444 (49%), Gaps = 17/444 (3%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++ DAF  L+ M S+G  P+ V    +++ LCK  K+ +A  +M  MV     P   ++
Sbjct: 247 NRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTF 302

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L++  C++ N+  A+ L+EK    G+  + VT   +V  LC  G + + ++ L+R+  
Sbjct: 303 NVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVES 362

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G V +   Y+ L++            ++L D+  KG  PN+ +YN+L +G C  G  + 
Sbjct: 363 MGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDS 422

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD------GGDRSPTIVT 310
           AI  F D+ + G   N ++Y+ L+R LC  GR E+  ++L  M+      GG  SP    
Sbjct: 423 AIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISP---- 478

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN +I  L    + + AL+ L +M K    P A   +  I   C+EG +    +  DQM 
Sbjct: 479 YNSIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMI 536

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                P+   Y  L    C  G V+EAF +I  + +         +  +I++ C +GK  
Sbjct: 537 KEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVG 596

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +L+ +M   G  PD  +YS ++  LC +G  ++A+ +F+ M E D  PD   +N++L
Sbjct: 597 SALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 656

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQ 513
           L L +         +F + ++ G+
Sbjct: 657 LCLTQETVWLEGDNLFHLQLQDGK 680



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 227/466 (48%), Gaps = 16/466 (3%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M+  G   D      L+  LC  N++  A K++++M S G  P+   Y  +++ LCK 
Sbjct: 222 KKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKN 281

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G VG A  L+ +M +   P++ VT+N L+   C   NL Q+L  L++    G VP+  T 
Sbjct: 282 GKVGRARSLMNEMVE---PSD-VTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTA 337

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++    K   V   +++L+ + + GG  ++V+YN L+ G C  G+ +   R  +D+  
Sbjct: 338 TKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEI 397

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG  PNV +YNIL    C  G  + A +L  +M     +   +TY+ LI  L   G+ + 
Sbjct: 398 KGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMED 457

Query: 327 ALKVLDEM------VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K+L+ M        GR  P    YN II  L  + + +  ++ L +M     +  + +
Sbjct: 458 GFKILELMEESRGGAGGRISP----YNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRS 513

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
              L   C  G + +A  +   +  +        Y  +I   C+ G   +AF+L+ EM  
Sbjct: 514 LRILG-FCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVD 572

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
           +G+ P + T+++LI   C +G +  AL++   M      PD+ +++ ++  LC       
Sbjct: 573 HGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQK 632

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           ++ +F  M+EK  +P+ +T+  ++  +  Q+ + L  + L  LQL+
Sbjct: 633 AVRLFLQMVEKDILPDYSTWNSMLLCLT-QETVWLEGDNLFHLQLQ 677



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/497 (22%), Positives = 229/497 (46%), Gaps = 40/497 (8%)

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM--------------------------- 123
           S G  PD      ++  L +A  +++ IKV+++                           
Sbjct: 156 SIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDL 215

Query: 124 --------MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
                   M+ +G+  D  ++  L+  LC    +G A +L++ M+  G   NTV YN+++
Sbjct: 216 AREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI 275

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
             LC  G + ++   ++ +++    P+  T++ L+ A  +E  +  A+ LL+   + G  
Sbjct: 276 HALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFV 331

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P++V+   ++  LCK GR  E +     + S G   +VV+YN L++  CM G+ +  + +
Sbjct: 332 PDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRV 391

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L +M+     P + TYNIL       G  D A+ + ++M       +  +Y+ +I  LCS
Sbjct: 392 LKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCS 451

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
            G+++   K L+ M   R           +++ G+ K  +    ++ L   +   P+   
Sbjct: 452 GGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVD 511

Query: 416 KYV-ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           + + I   C +G    A ++  +M K G  P    Y  LI G C +G + EA E+   M 
Sbjct: 512 RSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMV 571

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           ++ Y P    FNAL+   C   +   +L++ + M+ +G +P+  +Y+ +V+ + ++ + +
Sbjct: 572 DHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQ 631

Query: 535 LSAEVLKELQLRQVVSE 551
            +  +  ++  + ++ +
Sbjct: 632 KAVRLFLQMVEKDILPD 648



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 182/398 (45%), Gaps = 38/398 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L  A + LE+  S G  PDVV AT ++  LCKA ++ + ++V+E + S G + D  
Sbjct: 311 QEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVV 370

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   C  G      ++++ ME  G   N  TYN L  G C  G L+ ++   + +
Sbjct: 371 AYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDM 430

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI-IAKGGKPNLVS-YNVLLTGLCKEG 252
              G+  N  TY  L+        +    K+L+ +  ++GG    +S YN ++ GL K+ 
Sbjct: 431 KTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKN 490

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + EEA+ F   +      P  V  ++ +   C EG   +A  +  +M      P+++ Y 
Sbjct: 491 QFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYV 548

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI      G    A ++++EMV   + P+A ++N +I+  C +GKV   +K ++ M  R
Sbjct: 549 CLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGR 608

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            C P+ G+Y                            SP      ++ +LC KG   +A 
Sbjct: 609 GCLPDMGSY----------------------------SP------MVDALCNKGDFQKAV 634

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           +L  +M +    PD  T++S++  L  E +  E   +F
Sbjct: 635 RLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLF 672



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/451 (23%), Positives = 195/451 (43%), Gaps = 41/451 (9%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           I + S+Y  L++ LC         +++++M    G P +   + ++VRGL     + Q +
Sbjct: 124 IHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMI 183

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
           + LD + + G  P+   ++ +L+   KE    A       ++  G   +  ++ +L+ GL
Sbjct: 184 KVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGL 243

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C   R  +A +  + + S+G  PN V YN ++ +LC  G+   A  L+ EM      P+ 
Sbjct: 244 CLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSD 299

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           VT+N+LI +         AL +L++     F P   +   ++  LC  G+V   V+ L++
Sbjct: 300 VTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLER 359

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           +       +   YN L    C +GK +    +++ +  K      + Y  + +  C  G 
Sbjct: 360 VESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGM 419

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD--VDNF 485
              A  L  +M   G   +  TY +LIRGLC  G +E+  +I  +MEE        +  +
Sbjct: 420 LDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPY 479

Query: 486 NALLLGLCKSRRTDLSLE---------------------------------VFQMMIEKG 512
           N+++ GL K  + + +LE                                 V+  MI++G
Sbjct: 480 NSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEG 539

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +P+   Y  L+ G      +  + E++ E+
Sbjct: 540 GVPSVLVYVCLIHGFCQDGNVREAFELINEM 570



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 136/328 (41%), Gaps = 47/328 (14%)

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT-YNIL 314
           +  R+  +LP+  F  N  +Y  L+  LC   R+E   E+L EM     SP   + +  +
Sbjct: 112 QTFRWASNLPN--FIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTI 169

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L         +KVLD + K    PS   +N I+  L  E  +DL      + F+R+ 
Sbjct: 170 VRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKE-DIDLA-----REFYRKK 223

Query: 375 KPNEGTYN-----GLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
               G        G+ M  LC   ++ +AF ++Q + ++  +     Y  +I +LC+ GK
Sbjct: 224 MMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGK 283

Query: 428 TYQAFQLLYEMTK-------------------------------YGFTPDSYTYSSLIRG 456
             +A  L+ EM +                                GF PD  T + ++  
Sbjct: 284 VGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGI 343

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           LC  G + E +E+   +E      DV  +N L+ G C   +  +   V + M  KG +PN
Sbjct: 344 LCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPN 403

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQ 544
             TY IL  G      L+ + ++  +++
Sbjct: 404 VDTYNILASGYCDSGMLDSAIDLFNDMK 431



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 72/137 (52%), Gaps = 3/137 (2%)

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEM-TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           Q  Y+ +I  LC   +     ++L EM +  G  PD   + +++RGL    ++ + +++ 
Sbjct: 127 QSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVL 186

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF-QMMIEKGQMPNETTYTILVEGIAH 529
            ++ ++   P +  FN++L  L K    DL+ E + + M+  G   ++ T+ IL++G+  
Sbjct: 187 DLITKFGENPSLKIFNSILDVLVK-EDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCL 245

Query: 530 QDELELSAEVLKELQLR 546
            + +  + ++L+ ++ R
Sbjct: 246 TNRIGDAFKLLQVMKSR 262


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 229/489 (46%), Gaps = 21/489 (4%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++D      RM+     P V++   +L  L K       I +   +  +GI P+  S + 
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+NC C  G + +A  +  K+   GY  NT+T  +LV+G C+   + ++L F D ++  G
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N  +Y  L+    K     AA+++L  I  K    ++V Y+ ++ GLCK+    +A 
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             + ++ +K   P VV+ N L+   C+ G+++EA  LL EM   + +P + T+NIL+ +L
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG-----------------KVDL 361
              GK   A   +  M+K    P   +Y+ ++   C                    K+ +
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKM 351

Query: 362 VVKCLDQMFHRRCK---PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           V K L   +  RC+   P+  TYN L   LC  G++  A+ ++  + +    +    Y  
Sbjct: 352 VDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNS 411

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I +LC+     +A  L+ ++   G   D YTY+ LI GLC +G +++A  IF  +    
Sbjct: 412 LIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKG 471

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           Y   V  +  ++ GLC     + +  +   M + G +P+  T   ++  +   D+ E + 
Sbjct: 472 YNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAE 531

Query: 538 EVLKELQLR 546
           ++L+E+  R
Sbjct: 532 KLLREMIAR 540



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 215/453 (47%), Gaps = 24/453 (5%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F QLE     G KP++V  + L+   C   +M+ A  +   ++  G  P+  + T LV  
Sbjct: 94  FYQLE---FNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKG 150

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            C    V  A+   + +   G+  N V+Y +L+ GLC +G    +LQ L ++  K +  +
Sbjct: 151 FCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTD 210

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              YS +++   K++ V+ A +L  ++I K   P +V+ N L+ G C  G+ +EA    R
Sbjct: 211 VVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLR 270

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN---------- 312
           ++  K   P+V ++NIL+ +LC EG+ +EA   +A M      P +VTY+          
Sbjct: 271 EMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVN 330

Query: 313 ----------ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
                     I+I         D AL +  EM   R  P   +YN +I  LC  G++   
Sbjct: 331 EVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYA 390

Query: 363 VKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
            + +D+M       +  TYN L   LC    V +A A+++ + ++        Y  +I  
Sbjct: 391 WELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDG 450

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           LC++G+   A  +  ++   G+    +TY+ +I GLC+EGL+ EA  +   ME+    PD
Sbjct: 451 LCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPD 510

Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
                 ++  L ++ + + + ++ + MI +G +
Sbjct: 511 AVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 84/156 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ A+  ++ M   G   D++   +L+  LCK + + KAI +++ +   GI  D  +Y 
Sbjct: 386 RISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYN 445

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK+G +  A  + + +   GY     TY  ++ GLC+ G LN++   L ++   
Sbjct: 446 ILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDN 505

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           G VP+A T   ++ A ++      A KLL ++IA+G
Sbjct: 506 GCVPDAVTCETIIRALFENDKNERAEKLLREMIARG 541



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 67/130 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H ++ A   ++++  +G + D+     L+  LCK  ++K A  + + ++  G  
Sbjct: 414 DALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYN 473

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
               +YT ++N LC +G +  A  L+ KMED G   + VT  +++R L       ++ + 
Sbjct: 474 LTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKL 533

Query: 191 LDRLIQKGLV 200
           L  +I +GL+
Sbjct: 534 LREMIARGLL 543


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 253/525 (48%), Gaps = 15/525 (2%)

Query: 35  FSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRH-----RDHKLNDAFLQLERM 89
             ++   +R +  T V ++ K   +    +K    +DT       R  ++ + + ++ +M
Sbjct: 82  LKVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGEMWKM 141

Query: 90  VSKGHKPDV-----VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           + +  +  V     ++ ++++  L  A  + KA+ +   +      P A +Y  ++  L 
Sbjct: 142 IQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLM 201

Query: 145 KKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            +G      +L  +M + G  +P +TVTY++L+   C LG  + +++ L+ +   G+ P 
Sbjct: 202 HEGQYEKVHELYNEMSNEGHCFP-DTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPT 260

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           A  Y+ L+   +K   VH A+ L +++  +  +P++ +Y  L+ GL K GR +EA  FF 
Sbjct: 261 AKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFH 320

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++  +G  P+ V  N ++  L   GR ++A +L  EM      P++VTYN +I +L    
Sbjct: 321 EMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESK 380

Query: 323 KTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
                +    E +KG    PS  +Y+ +I   C   + +  +  L++M  +   P    Y
Sbjct: 381 SRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAY 440

Query: 382 NGLAMLCGVGKVQE-AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L    G  K  + A  + Q L     SS    Y  +I  L + G+   A  L  EM K
Sbjct: 441 CSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNK 500

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G TP+ Y Y++L+ GL   G+++EAL     M+E+   PD++++N +L GL K+     
Sbjct: 501 LGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 560

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           ++E+   M +    P+  +Y  ++  ++H    E +A+++KE+ +
Sbjct: 561 AMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNV 605



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 3/409 (0%)

Query: 89  MVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           M ++GH  PD V  + L+   CK  +   AI+++  M  +G+ P A  YT L+    K  
Sbjct: 216 MSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLN 275

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           NV  A+ L E+M       +  TY  L+RGL   G  +++  F   + ++G  P+    +
Sbjct: 276 NVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVIN 335

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGRTEEAIRFFRDLPS 266
            ++    K   +  A+KL +++      P++V+YN ++  L + + R  E   +F  +  
Sbjct: 336 NMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKG 395

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P+  +Y+IL+   C   R E+A  LL EMD     P    Y  LI +L    + D 
Sbjct: 396 SGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDI 455

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-A 385
           A ++  E+ +     SA  Y  +I  L   G++D  V   D+M    C PN   YN L +
Sbjct: 456 AHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMS 515

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            L   G + EA   ++ +           Y  ++  L + G  ++A ++L  M +    P
Sbjct: 516 GLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKP 575

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           D+ +Y++++  +   GL EEA ++   M    ++ D+  ++++L  + K
Sbjct: 576 DAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 6/382 (1%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + A   L  M   G +P     T L+    K N +  A+ + E M      PD  +YT L
Sbjct: 243 DSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTEL 302

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  L K G    A     +M   G   +TV  N+++  L   G L+ +++  + +     
Sbjct: 303 IRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQC 362

Query: 200 VPNAFTYSFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +P+  TY+ +++A ++ +  +       + +   G  P+  +Y++L+ G CK  RTE+A+
Sbjct: 363 IPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAM 422

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
               ++  KGF P   +Y  L+ +L    R++ A+EL  E+     S +   Y ++I  L
Sbjct: 423 MLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHL 482

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+ D A+ + DEM K    P+  +YN +++ L   G +D  +  + +M    C P+ 
Sbjct: 483 GKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDI 542

Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS--PQEF-YKYVITSLCRKGKTYQAFQLL 435
            +YN   +L G+ K       ++ L N + S+  P    Y  V+ ++   G   +A +L+
Sbjct: 543 NSYN--IILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLM 600

Query: 436 YEMTKYGFTPDSYTYSSLIRGL 457
            EM   GF  D  TYSS++  +
Sbjct: 601 KEMNVLGFEYDLITYSSILEAI 622



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 4/284 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA-NKMKKAIKVMEMMVSSGIIPDASSY 136
           +L+DA    E M +    P VV    ++  L ++ +++ +     E M  SGI P   +Y
Sbjct: 346 RLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTY 405

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           + L++  CK      AM L+E+M++ G+P     Y SL+  L      + + +    L +
Sbjct: 406 SILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKE 465

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
                +A  Y+ +++   K   +  A+ L D++   G  PN+ +YN L++GL + G  +E
Sbjct: 466 NCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDE 525

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+   R +   G  P++ SYNI+L  L   G    A E+L+ M      P  V+YN ++G
Sbjct: 526 ALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLG 585

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
           ++++ G  + A K++ EM    F     +Y+ I+  +   GKVD
Sbjct: 586 AMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAI---GKVD 626



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 3/241 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ERM   G  P     + L+   CK N+ +KA+ ++E M   G  P  ++Y  L++ L K
Sbjct: 390 FERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 449

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A +L +++++    ++   Y  +++ L   G L+ ++   D + + G  PN + 
Sbjct: 450 AKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYA 509

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    +   +  A+  +  +   G  P++ SYN++L GL K G    A+    ++ 
Sbjct: 510 YNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 569

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
               +P+ VSYN +L ++   G +EEA +L+ EM+       ++TY+ ++ ++   GK D
Sbjct: 570 QSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAI---GKVD 626

Query: 326 H 326
           H
Sbjct: 627 H 627


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 207/445 (46%), Gaps = 9/445 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L + +  G  P       L+   C+A       +V+  M++   +P   +Y  ++N LCK
Sbjct: 251 LNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCK 310

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
                 A ++   ++D GY  + V Y +++ GLC +G+  ++ +    ++ KG+ PNA+T
Sbjct: 311 NEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYT 370

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +L  + K      A +L +++  KG     V+ N +++ LC  G+++EA   F+ + 
Sbjct: 371 YNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMS 430

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G + + ++YN L+R  C EG+ +E   LL E+   D  P++  Y +LI      G  +
Sbjct: 431 ETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFE 490

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-- 383
            A ++L +M      P+A +Y+ ++      G  + V     ++++  C    GT     
Sbjct: 491 AAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHV----RELYNETCNKGYGTTTATC 546

Query: 384 ---LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
              ++ LC  GK  EA  + + +      +    Y  +I   C++GK  ++  LL E+  
Sbjct: 547 NKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVA 606

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P + +Y+SLI  LC  G  E A  ++  M     +P  +    L+ GLCK  R   
Sbjct: 607 QGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATE 666

Query: 501 SLEVFQMMIEKGQMPNETTYTILVE 525
            ++    M+E    P +  +  L E
Sbjct: 667 GMDRLMGMLENKIKPKKAAFEDLAE 691



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 212/478 (44%), Gaps = 42/478 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY--LVNCLCKKGNVG 150
           G +  +V   ++L    KA K +   +  + M+ +G   DA++ T   L+   C  G V 
Sbjct: 186 GIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVA 245

Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
              +L+ +    G      TYN L+ G C   N     + L  +I +  +P  +TY  ++
Sbjct: 246 RGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEII 305

Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
               K      A ++ +D+  +G  P+ V Y  ++ GLC+ G   EA + + ++  KG +
Sbjct: 306 NGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQ 365

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           PN  +YN +L      G +E A EL  EM       T VT N +I  L   GK+D A +V
Sbjct: 366 PNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEV 425

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVD-----------------------LVVK-CL 366
             +M +   +  A +YN +I   C EGKVD                       L++K C 
Sbjct: 426 FKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCK 485

Query: 367 D-----------QMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQ 412
           D            M  +   PN  TY+   ML G    G  +    +     NK   +  
Sbjct: 486 DGDFEAAKRLLGDMSSKGLHPNAYTYD--TMLHGSLKSGDFEHVRELYNETCNKGYGTTT 543

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
                +I+ LC +GK+ +A ++  +M++ G   D+ TY+SLIRG C EG + +++ +   
Sbjct: 544 ATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNE 603

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
           +     +P   ++ +L++ LC++   + +  ++  M+ KG  P+      L+ G+  Q
Sbjct: 604 LVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQ 661



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 215/473 (45%), Gaps = 6/473 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI-IPDASSYTYLVNCLCKKGNVGY 151
           G  PD       +  LC    +++AI+V   +  +GI I   +  + L  CL K G    
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCL-KAGKTEL 209

Query: 152 AMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             +  ++M   G  +  NT T   L++  C  G + +  + L++ ++ GL P   TY+ L
Sbjct: 210 LFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKL 269

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           +    + +   +  ++L  +IA+   P + +Y  ++ GLCK     EA R F DL  +G+
Sbjct: 270 IAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGY 329

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            P+ V Y  ++  LC  G + EA +L  EM      P   TYN ++      G  + A +
Sbjct: 330 APDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACE 389

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LC 388
           + +EM    +  +  + N II+ LCS GK D   +   +M     + +  TYN L    C
Sbjct: 390 LYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFC 449

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             GKV E   ++  L  +        Y+ +I   C+ G    A +LL +M+  G  P++Y
Sbjct: 450 KEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAY 509

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY +++ G    G  E   E++       Y       N ++  LC   ++D + E+F+ M
Sbjct: 510 TYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKM 569

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV-SESAVERLVMQ 560
            E G   +  TY  L+ G   + ++  S  +L EL  + +  S S+   L++Q
Sbjct: 570 SETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQ 622



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 190/415 (45%), Gaps = 34/415 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A+     +  +G+ PD V  T +++ LC+     +A K+   M+  G+ P+A +Y  ++
Sbjct: 316 EAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTML 375

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +   K G+   A +L  +M + GY T TVT N ++  LC  G  +++ +   ++ + G+ 
Sbjct: 376 HGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQ 435

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            +A TY+ L+    KE  V   M LL++++A+  +P++  Y +L+   CK+G  E A R 
Sbjct: 436 ADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRL 495

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             D+ SKG  PN  +Y+ +L      G +E   EL  E        T  T N +I  L  
Sbjct: 496 LGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCS 555

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK+D A ++  +M +   +  A +YN +I   C EGKV   +  L+++  +  +P+  +
Sbjct: 556 RGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASS 615

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           Y  L              IIQ                    LC+ G    A +L  +M  
Sbjct: 616 YASL--------------IIQ--------------------LCQNGDAESAKRLWGDMVS 641

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            G  P +     LI GLC +G   E ++  + M E   KP    F  L   L +S
Sbjct: 642 KGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQS 696



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 155/361 (42%), Gaps = 7/361 (1%)

Query: 187 SLQFLDRL-IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           SL+F   L       P+  + + L EA    + V AA K++ DI   G  P+  S    +
Sbjct: 107 SLRFFQWLCTNHDCTPDPISSNMLFEALLDAKAVRAA-KMVRDI--AGFIPDSASLEQYV 163

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGD 303
             LC  G  EEAI  +  L   G   ++V+ N +L      G+ E   E   EM   G  
Sbjct: 164 KCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTA 223

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
                 T   LI +    G+     ++L++ +K    P   +YN +IA  C       + 
Sbjct: 224 SDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMS 283

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           + L  M  R   P   TY  +   LC   +  EA+ +   L ++  +  +  Y  +I  L
Sbjct: 284 EVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGL 343

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C  G   +A +L +EM   G  P++YTY++++ G    G  E A E++  M    Y    
Sbjct: 344 CEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTT 403

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
              N ++  LC   ++D + EVF+ M E G   +  TY  L+ G   + +++    +L E
Sbjct: 404 VTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNE 463

Query: 543 L 543
           L
Sbjct: 464 L 464



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 118/225 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+++    L  +V++  +P V     L+   CK    + A +++  M S G+ P+A 
Sbjct: 450 KEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAY 509

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++   K G+  +  +L  +  + GY T T T N ++  LC  G  +++ +   ++
Sbjct: 510 TYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKM 569

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+  +A TY+ L+    KE  V  +M LL++++A+G +P+  SY  L+  LC+ G  
Sbjct: 570 SETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDA 629

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           E A R + D+ SKG EP+      L+  LC +GR  E  + L  M
Sbjct: 630 ESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGM 674



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 63/134 (47%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A    ++M   G K D +   +L+   CK  K+ K++ ++  +V+ G+ P ASSY 
Sbjct: 558 KSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYA 617

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC+ G+   A +L   M   G   +      L+ GLC  G   + +  L  +++ 
Sbjct: 618 SLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLEN 677

Query: 198 GLVPNAFTYSFLLE 211
            + P    +  L E
Sbjct: 678 KIKPKKAAFEDLAE 691


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 221/475 (46%), Gaps = 4/475 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF   + M   G  P+V+    ++  LCKA K+ +A  + E M      PD  ++  L++
Sbjct: 426 AFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLID 485

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            L K+G V  A +L E+M D     N V Y SL++     G      +    +I +G  P
Sbjct: 486 GLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP 545

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +    +  ++  +K         L ++I ++G  P+++SY++L+ GL K G   E    F
Sbjct: 546 DLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELF 605

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +  +G   +  +YN  +   C  G+  +A +LL EM    R PT+VTY  +I  LA  
Sbjct: 606 YAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKI 665

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + D A  + +E        +   Y+ +I      G++D     ++++  +   PN  T+
Sbjct: 666 DRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 725

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N L   L    ++ EA    Q++ N + +     Y  +I  LCR  K  +AF    EM K
Sbjct: 726 NCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQK 785

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P++ TY+++I GL   G I EA  +F   +     PD  ++NA++ GL  SRR   
Sbjct: 786 QGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAME 845

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA---EVLKELQLRQVVSES 552
           + ++F+    KG   +  T   L++ +   + LE +A    VL+E+   Q  + S
Sbjct: 846 AYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKSQHAARS 900



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 238/554 (42%), Gaps = 82/554 (14%)

Query: 81  DAFLQ-LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D F Q L  M   G  P       L+    K+NK+++   +++ M      P  S+YT L
Sbjct: 145 DYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTL 204

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  L         + L  +M++ GY  +   + +++R     G L+ +L  LD +    L
Sbjct: 205 IGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCL 264

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
             +   Y+  ++   K   V  A K   +I + G  P+ V+Y  ++  LCK  R +EA+ 
Sbjct: 265 HADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVE 324

Query: 260 FF------RDLP-----------------------------SKGFEPNVVSYNILLRSLC 284
            F      R++P                             ++G  P+V++YN +L  L 
Sbjct: 325 IFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLG 384

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
            +GR  EA     EM   D +P + TYN+LI  L   G+ + A KV D M +    P+  
Sbjct: 385 KKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVM 443

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAF------ 397
           + N +I RLC   K+D      + M H+ C P+E T+  L    G  G+V +A+      
Sbjct: 444 TVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQM 503

Query: 398 -------------AIIQSL---GNKQNSSPQEFYKYVITSLC---------------RKG 426
                        ++I+S    G K++    + +K +I   C               + G
Sbjct: 504 LDSDKIPNAVVYTSLIKSFFKCGRKEDG--HKIFKEMIHRGCSPDLRLLNAYMDCVFKAG 561

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +T +   L  E+   GF PD  +YS LI GL   G   E  E+F  M+E     D   +N
Sbjct: 562 ETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYN 621

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE---- 542
             + G CKS + + + ++ + M  KG+ P   TY  +++G+A  D L+ +  + +E    
Sbjct: 622 TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681

Query: 543 -LQLRQVVSESAVE 555
            L+L  V+  S ++
Sbjct: 682 GLELNVVIYSSLID 695



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 224/477 (46%), Gaps = 2/477 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A+  LER  ++G  P V+    +L  L K  ++ +A++  E M      P+ S+Y 
Sbjct: 353 KFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA-PNLSTYN 411

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G V  A ++ + M++ G   N +T N ++  LC    L+++    + +  K
Sbjct: 412 VLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK 471

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+  T+  L++   K+  V  A +L + ++     PN V Y  L+    K GR E+ 
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F+++  +G  P++   N  +  +   G   +   L  E+      P +++Y+ILI  
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHG 591

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G      ++   M +        +YN  I   C  GKV+   + L++M  +  +P 
Sbjct: 592 LVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPT 651

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  L  + ++ EA+ + +   +         Y  +I    + G+  +A+ ++ 
Sbjct: 652 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIME 711

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+ + G TP+ YT++ L+  L     I EAL  F  M+     P+   ++ L+ GLC+ R
Sbjct: 712 ELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVR 771

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           + + +   +Q M ++G  PN  TYT ++ G+A    +  ++ + +  +    V +SA
Sbjct: 772 KFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSA 828



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 187/406 (46%), Gaps = 1/406 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  +++DA+   E+M+     P+ V  T+L+    K  + +   K+ + M+  G  
Sbjct: 485 DGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCS 544

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD       ++C+ K G  G    L E+++  G+  + ++Y+ L+ GL   G   ++ + 
Sbjct: 545 PDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYEL 604

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + ++G V +   Y+  ++   K   V+ A +LL+++  KG +P +V+Y  ++ GL K
Sbjct: 605 FYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK 664

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R +EA   F +  S G E NVV Y+ L+      GR +EA  ++ E+     +P + T
Sbjct: 665 IDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 724

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +N L+ +L    + + AL     M   +  P+  +Y+ +I  LC   K +       +M 
Sbjct: 725 WNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQ 784

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +  KPN  TY  + A L   G + EA ++ +             Y  +I  L    +  
Sbjct: 785 KQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAM 844

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           +A+++  E    G    + T  +L+  L  +  +E+A  +  V+ E
Sbjct: 845 EAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLRE 890



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 202/466 (43%), Gaps = 19/466 (4%)

Query: 96  PDVVQATNLLYD----------LCKANKMKKAI---KVMEMMVSSGIIPDASSYTYLVNC 142
           PDV  A +L  +          L +A  + +AI   +  E      + P+A  Y  L+  
Sbjct: 80  PDVENALSLFVESPKTDLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEA--YDSLLLV 137

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           + K     Y  Q++ +M   G+  +T T   L+        L +    +  + +    P 
Sbjct: 138 MAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPA 197

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              Y+ L+ A    +     + L   +   G + ++  +  ++    +EGR + A+    
Sbjct: 198 FSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLD 257

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++ S     ++V YN+ +      G+ + A +   E+      P  VTY  +IG L    
Sbjct: 258 EMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGN 317

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           + D A+++ ++M + R  P A +YN +I    S GK D     L++   R C P+   YN
Sbjct: 318 RLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYN 377

Query: 383 GLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTK 440
            +    G  G++ EA    + +  K++++P    Y  +I  LC+ G+   AF++   M +
Sbjct: 378 CILTCLGKKGRLGEALRTFEEM--KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKE 435

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P+  T + +I  LC    ++EA  IF  M      PD   F +L+ GL K  R D 
Sbjct: 436 AGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDD 495

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +  +++ M++  ++PN   YT L++        E   ++ KE+  R
Sbjct: 496 AYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHR 541


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 201/384 (52%), Gaps = 7/384 (1%)

Query: 94  HKPDVV---QATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNV 149
           +K DV+   QA N++ D L K  +     KV   MV+ G  P+  +Y  L++  C++G+ 
Sbjct: 150 YKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDF 209

Query: 150 GYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
             A +L ++M E   +PT  V Y  L+RGLC    ++++      +   G++PN +TY+ 
Sbjct: 210 LKAFRLFDEMIEKKIFPT-VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNT 268

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +++   K   V  A++L  +++  G  PN+V++ +L+ GLCK      A +F  D+ S G
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PN+  YN L+   C  G   EA  L +E++  +  P + TY+ILI  L    + + A 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            +L EM K  F P+A +YN +I   C EG ++  ++   QM  +  +PN  T++ L    
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK++ A  +   +  K        Y  +I    + G T +AF+L  EM + G  P+ 
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508

Query: 448 YTYSSLIRGLCMEGLIEEALEIFV 471
           +T S LI GLC +G I +A+++F+
Sbjct: 509 FTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 171/348 (49%), Gaps = 3/348 (0%)

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           ++P     + +L+   K+       K+  D++A+G  PN+V+Y  L+ G C++G   +A 
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R F ++  K   P VV Y IL+R LC E R  EA  +   M      P + TYN ++   
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
                   AL++  EM+     P+  ++  +I  LC   ++    K L  M      PN 
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLY 436
             YN L    C  G + EA ++  S   K    P  F Y  +I  LC   +  +A  LL 
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSL-HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K GF P++ TY++LI G C EG +E+A+E+   M E   +P++  F+ L+ G CK+ 
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + + ++ ++  M+ KG +P+   YT L++G       + +  + KE+Q
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 171/358 (47%), Gaps = 1/358 (0%)

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N ++ GL   G  +   +    ++ +G  PN  TY  L++   ++     A +L D++I 
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           K   P +V Y +L+ GLC E R  EA   FR + + G  PN+ +YN ++   C     ++
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A EL  EM G    P +VT+ ILI  L    +   A K L +M      P+   YN +I 
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
             C  G +   +    ++      P+  TY+ L   LCGV +++EA  ++Q +  K    
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C++G   +A ++  +MT+ G  P+  T+S+LI G C  G +E A+ ++
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
             M      PDV  + AL+ G  K   T  +  + + M E G  PN  T + L++G+ 
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 229/518 (44%), Gaps = 58/518 (11%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           + ++++A      M + G  P++     ++   CK   +KKA+++ + M+  G++P+  +
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           +  L++ LCK   +  A + +  M  +G   N   YN L+ G C  GNL+++L     + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           +  ++P+ FTYS L++       +  A  LL ++  KG  PN V+YN L+ G CKEG  E
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +AI     +  KG EPN+++++ L+   C  G+ E A  L  EM      P +V Y  LI
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC---------- 365
                 G T  A ++  EM +    P+  + + +I  LC +G++   +K           
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTT 540

Query: 366 ------LDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGN------KQNSSPQ 412
                 LD+  ++ C      + G++  C  V +V + FA             K   S Q
Sbjct: 541 GSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQ 600

Query: 413 EFYKYVITS-----------LCRKG-KTYQAFQLLYEM-------------------TKY 441
              +Y+ +S           L RK   +  +F L++ +                     +
Sbjct: 601 TLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINF 660

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           GF P  +  +SLI      G + +A  +F   +E   K ++ ++ +++     ++R + +
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMF---DEIPSK-NLISWTSVISAYVDNQRPNKA 716

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           L++F+ M      P+  T T+ +   A    L++   +
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWI 754



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 167/342 (48%), Gaps = 7/342 (2%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF   + M+ K   P VV  T L+  LC  +++ +A  +   M +SG++P+  +Y  +++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK  +V  A++L ++M   G   N VT+  L+ GLC    +  + +FL  +   G+VP
Sbjct: 272 GYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N F Y+ L++   K   +  A+ L  +I      P++ +Y++L+ GLC   R EEA    
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +++  KGF PN V+YN L+   C EG  E+A E+ ++M      P I+T++ LI      
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           GK + A+ +  EMV     P   +Y  +I     +G      +   +M      PN  T 
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511

Query: 382 NGLA-MLCGVGKVQEAFAII------QSLGNKQNSSPQEFYK 416
           + L   LC  G++ +A  +        + G+K N   +  Y+
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQ 553



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 106/500 (21%), Positives = 206/500 (41%), Gaps = 57/500 (11%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M  KG +P+++  + L+   CKA KM+ A+ +   MV  G++PD  +YT L++   K G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           N   A +L ++M++ G   N  T + L+ GLC  G ++ +++    L + G        +
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTN 545

Query: 208 FLLEAAYKE--------RGVH---AAMKLLDDIIAKGGKPNLVSY--------NVLLTGL 248
            L  + Y+         RG+      +  +  + A   +P    +        N  L   
Sbjct: 546 ELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRY 605

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL--LRSLCMEGRWEEANELLAEMDGGDRSP 306
            +   T + + FFR L  K    ++ S++++  L++  ++    E  ++ A +      P
Sbjct: 606 LQSSNTSKVLLFFRILLRKN-PSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEP 664

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA--ASYNPIIARLCSEGKVDLVVK 364
            I     LI   +  G    A  + DE+      PS    S+  +I+      + +  ++
Sbjct: 665 IIFLQTSLISMYSATGNVADAHNMFDEI------PSKNLISWTSVISAYVDNQRPNKALQ 718

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCG------VGKVQEAFAIIQSLGNK--QNSSPQEFYK 416
              QM     +P+  T       C       +G+   A+   + L      N+S    Y 
Sbjct: 719 LFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMY- 777

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-EE 475
               S C +  T + F L+         P+  T+  ++      GL+EE  + F  M E+
Sbjct: 778 ----SKCGEIGTARRFSLVL--------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKED 825

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
           Y  +P + +F  ++  LC   R  L  E ++ +++    PN   +  L+   + Q   + 
Sbjct: 826 YSLRPRISHFGCMVDLLC---RAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQGMWDK 882

Query: 536 SAEVLKELQLRQVVSESAVE 555
              V  +++ R+    S++E
Sbjct: 883 KMLVRNQIKQRRDPGCSSIE 902


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 227/498 (45%), Gaps = 42/498 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G +PDV     LL  LC A +M+ A +V E M     + +  S+  L    C+ G    A
Sbjct: 140 GAQPDVFTRNLLLRALCDAGRMELAQRVFEAMP----VRNEFSFGILARGYCRAGRSVDA 195

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           +++++ M       N V  N++V G C  G + ++ + ++R+  +GL PN  T++  + A
Sbjct: 196 LKVLDGMPS----MNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISA 251

Query: 213 AYKERGVHAAMKLLDDIIAKG----GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
             K   V  A ++  D+         +P+ V+++V+L+G C  G  +EA      +   G
Sbjct: 252 LCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGG 311

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
           F   V SYN  L  L   GR  EA+ELL EM      P   TYNI++  L   GK   A 
Sbjct: 312 FLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDAR 371

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           +V + +  G   P   +Y  ++   CS+G +    + LD+M  + C PN  TYN L   L
Sbjct: 372 RVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSL 431

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT--- 444
              G+  EA  +++ +  K  S        +I  LCR  K   A  ++  M + G T   
Sbjct: 432 WRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALG 491

Query: 445 --------------------PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
                               PD  TYS LI  LC EG  +EA +  + M   D  PD   
Sbjct: 492 RLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVI 551

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++  + G CK  +T L+++V + M +KG  P+  TY +L+ G    +E   S E++K   
Sbjct: 552 YDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGF---EEKHKSDEIMK--- 605

Query: 545 LRQVVSESAVERLVMQYD 562
           L   + E  V   V+ Y+
Sbjct: 606 LMSEMEEKGVSPNVLTYN 623



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 220/443 (49%), Gaps = 19/443 (4%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           ++V    ++   CK   +++A +++E M   G+ P+  ++   ++ LCK G V  A ++ 
Sbjct: 206 NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIF 265

Query: 157 EKMED---YGYP-TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + M++   +G P  + VT++ ++ G C  G ++++   +D +   G +    +Y+  L  
Sbjct: 266 KDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSG 325

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             +   V  A +LL ++  +   PN  +YN++++GLCKEG+  +A R    + S    P+
Sbjct: 326 LVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPD 385

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV+Y  LL + C +G    AN +L EM     +P   TYN+L+ SL   G+T  A ++L+
Sbjct: 386 VVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLE 445

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
            M +  +    A  N II  LC   K+D+ +  +D M+       EG+         +G+
Sbjct: 446 RMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWE------EGST-------ALGR 492

Query: 393 VQEAF-AIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           +  +F +++      Q   P    Y  +I++LC++G+  +A + L EM     +PDS  Y
Sbjct: 493 LGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIY 552

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            + I G C  G    A+++   ME+    P    +N L+ G  +  ++D  +++   M E
Sbjct: 553 DTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEE 612

Query: 511 KGQMPNETTYTILVEGIAHQDEL 533
           KG  PN  TY  L++    Q  L
Sbjct: 613 KGVSPNVLTYNSLIKSFCQQGML 635



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 179/422 (42%), Gaps = 50/422 (11%)

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
           ++S   P    Y  L+    ++  +     L + +   G   +  T N L+R LC  G +
Sbjct: 102 LASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRM 161

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP--NLVSYN 242
               +   R+ +   V N F++  L       RG   A + +D +    G P  NLV  N
Sbjct: 162 ----ELAQRVFEAMPVRNEFSFGIL------ARGYCRAGRSVDALKVLDGMPSMNLVVCN 211

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD-- 300
            ++ G CKEG  EEA R    +  +G  PNVV++N  + +LC  GR  +A  +  +M   
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQED 271

Query: 301 --GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
              G   P  VT+++++      G  D A  ++D M  G F     SYN  ++ L   G+
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           V    + L +M H R  PN  T                                  Y  +
Sbjct: 332 VGEAHELLREMAHERIHPNSYT----------------------------------YNII 357

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           ++ LC++GK + A ++   +     +PD  TY+SL+   C +G I  A  I   M +   
Sbjct: 358 VSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGC 417

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P+   +N LL  L ++ RT  +  + + M EKG   +     I+++G+    +L+++  
Sbjct: 418 APNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMG 477

Query: 539 VL 540
           ++
Sbjct: 478 IV 479



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 147/306 (48%), Gaps = 23/306 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ +A   L  M  +   P+      ++  LCK  K   A +V   + S  + PD  
Sbjct: 328 RNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVV 387

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++  C KGN+  A +++++M   G   N+ TYN L++ L   G   ++ + L+R+
Sbjct: 388 TYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERM 447

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK------------------- 235
            +KG   +    + +++   +   +  AM ++D +  +G                     
Sbjct: 448 SEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSIS 507

Query: 236 ----PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
               P+ ++Y++L++ LCKEGR +EA +   ++  K   P+ V Y+  +   C  G+   
Sbjct: 508 QRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSL 567

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A ++L +M+    +P+  TYN+LI       K+D  +K++ EM +    P+  +YN +I 
Sbjct: 568 AIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIK 627

Query: 352 RLCSEG 357
             C +G
Sbjct: 628 SFCQQG 633



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 56/116 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ + ++A  +L  M+ K   PD V     ++  CK  K   AIKV+  M   G  P   
Sbjct: 526 KEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTR 585

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           +Y  L+    +K      M+L+ +ME+ G   N +TYNSL++  C  G L +   F
Sbjct: 586 TYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTRPCLF 641


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 226/497 (45%), Gaps = 40/497 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M ++G  PDV+  ++ +    K ++ K+A+ ++  M   G+ P+   Y+  ++   K
Sbjct: 209 LASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRK 268

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A+ L+++M   G   + +TY++++      G    + + L  +  KG+V N  T
Sbjct: 269 GGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIIT 328

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           YS ++ A  K      A+ LL ++   G  P++++Y+  ++   K+G+ EEA+   R++P
Sbjct: 329 YSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMP 388

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G  PN +SY I++ +    GRW EA +LL EM      P ++ Y+  I + A   + +
Sbjct: 389 MEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWE 448

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL +L EM      P+  SYN  I      G+  + V+ L +M      P+  TY+ + 
Sbjct: 449 QALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVI 508

Query: 386 MLCGVGK-VQEAFAIIQSLGNKQNSSPQEF------------------------------ 414
             C +G+  +EA  + + +  +Q  +P                                 
Sbjct: 509 ASCAMGRQWEEALDLFREM-QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGL 567

Query: 415 ------YKYVITSLCRKGKTY-QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                 Y+  I + C KG  + +   LL EM+  G TPD+ +Y   +    ++GL +EAL
Sbjct: 568 VPDAISYRTAIDA-CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEAL 626

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +   M      PDV  +N+ +    K  R   +  + + M   G  P+  ++   ++  
Sbjct: 627 VLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDAC 686

Query: 528 AHQDELELSAEVLKELQ 544
            + D+   + EVL E++
Sbjct: 687 GNGDQWGTAVEVLFEMR 703



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 212/447 (47%), Gaps = 1/447 (0%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
            +KA+ V++ M   G+ PD+ +Y+  +           A++L+  M   G P + +TY+S
Sbjct: 167 WRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSS 226

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
            +     +    +++  L  +  +G+ PN   YS  + A  K      A+ LL ++ A G
Sbjct: 227 AIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVG 286

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             P++++Y+ ++    K G+ E A R   ++P+KG   N+++Y+I++ +    G+WEEA 
Sbjct: 287 LAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAV 346

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
            LL EM     +P ++TY+  I + A  G+ + A+ +L EM      P+A SY  +I+  
Sbjct: 347 ALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISAC 406

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQ 412
              G+    +  L +M      P+   Y+     C    + ++A  +++ +     +   
Sbjct: 407 AKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNV 466

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             Y   I +  + G++  A +LL EM  +G  PD  TYS++I    M    EEAL++F  
Sbjct: 467 ISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFRE 526

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M+     PDV + N  +    +    + +L+V   M   G +P+  +Y   ++  A  D 
Sbjct: 527 MQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDR 586

Query: 533 LELSAEVLKELQLRQVVSESAVERLVM 559
            +   ++L+E+    +  ++   R  M
Sbjct: 587 WKEIIDLLREMSTVGLTPDAISYRFAM 613



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 205/436 (47%), Gaps = 1/436 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M + G  PDV+  + ++    K  + + A +++  M + G++ +  +Y+ ++    K
Sbjct: 279 LKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAK 338

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A+ L+ +M++ G   + +TY+S +      G   +++  L  +  +G+ PNA +
Sbjct: 339 WGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAIS 398

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  ++ A  K      A+ LL ++ A G  P++++Y+  +    +  R E+A+   R++P
Sbjct: 399 YGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMP 458

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G  PNV+SYN  + +    GR + A ELL EM     +P ++TY+ +I S A   + +
Sbjct: 459 ATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWE 518

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL +  EM +    P   S N  I      G  +  +  L +M      P+  +Y    
Sbjct: 519 EALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAI 578

Query: 386 MLCGVG-KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             C  G + +E   +++ +     +     Y++ +++    G   +A  LL +M   G +
Sbjct: 579 DACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLS 638

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY+S I      G  +EA  +   M  +   PDV++FNA +       +   ++EV
Sbjct: 639 PDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEV 698

Query: 505 FQMMIEKGQMPNETTY 520
              M   G  PNE TY
Sbjct: 699 LFEMRALGVSPNEATY 714



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 188/374 (50%), Gaps = 2/374 (0%)

Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
           G+  ++L  LDR+ ++G+ P++  YS  + A    R    A++LL  + A+G  P++++Y
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           +  +    K  R +EA+   R +  +G +PNV+ Y+  + +    G+WE A +LL EM  
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              +P ++TY+ +I + A  G+ + A ++L EM       +  +Y+ +I      G+ + 
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            V  L +M      P+  TY+     C   G+ +EA  +++ +  +  +     Y  VI+
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +  ++G+  +A  LL EM  +G  PD   YS+ I         E+AL +   M      P
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +V ++N+ +    K+ R+ +++E+ + M   G  P+  TY+ ++   A   + E + ++ 
Sbjct: 465 NVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLF 524

Query: 541 KELQLRQVVSESAV 554
           +E+Q RQ ++   V
Sbjct: 525 REMQ-RQGITPDVV 537



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 176/376 (46%), Gaps = 5/376 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  +A   L  M   G  PDV+  ++ +    K  + ++A+ ++  M   G+ P+A SY 
Sbjct: 341 QWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYG 400

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++   K+G    A+ L+++M+ +G P + + Y++ +          Q+L  L  +   
Sbjct: 401 IVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPAT 460

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT-EE 256
           GL PN  +Y+  ++A  K      A++LL ++ A G  P++++Y+ ++   C  GR  EE
Sbjct: 461 GLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIAS-CAMGRQWEE 519

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+  FR++  +G  P+VVS N  + +    G WEEA ++L EM      P  ++Y   I 
Sbjct: 520 ALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAID 579

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           + A   +    + +L EM      P A SY   ++    +G     +  L  M      P
Sbjct: 580 ACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSP 639

Query: 377 NEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY-QAFQL 434
           +  TYN     C   G+ +EA  +++ +     +     +   I + C  G  +  A ++
Sbjct: 640 DVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDA-CGNGDQWGTAVEV 698

Query: 435 LYEMTKYGFTPDSYTY 450
           L+EM   G +P+  TY
Sbjct: 699 LFEMRALGVSPNEATY 714



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 58/140 (41%)

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
           G +Q   P    K  +    + G   +A  +L  M + G  PDS  YSS I         
Sbjct: 143 GGRQAGMPMSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQW 202

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           E A+E+   M      PDV  +++ +    K  R   ++ + + M  +G  PN   Y+  
Sbjct: 203 ERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAA 262

Query: 524 VEGIAHQDELELSAEVLKEL 543
           +       + E + ++LKE+
Sbjct: 263 ISACRKGGQWETAVDLLKEM 282


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 148/564 (26%), Positives = 237/564 (42%), Gaps = 73/564 (12%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K++  +   + M++KG  PDV     LL  LC+  K K A  ++  M  SG+ P A 
Sbjct: 152 KEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAV 211

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N  CKKG    A QL++ M   G   +  TYN  +  LC      +    L R+
Sbjct: 212 TYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRM 271

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +  + PN  TY+ L+    +E  +  A K+ D++      PN ++YN L+ G C  G  
Sbjct: 272 RRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNI 331

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLR--------------------------------- 281
            EA+R    + S G  PN V+Y  LL                                  
Sbjct: 332 GEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAM 391

Query: 282 --SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
              LC  G  EEA +LL +M     +P +VT+++LI      GK ++A +++ +M K   
Sbjct: 392 IDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGL 451

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFA 398
            P+   Y+ +I   C  G +   +     M H     +  T N L A  C  GK++EA  
Sbjct: 452 VPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEY 511

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            +  +           +  +I      G   +AF +  +M  +G  P  +TY  L++GLC
Sbjct: 512 FMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLC 571

Query: 459 MEGLIEEALEIF------------VV-----------------------MEEYDYKPDVD 483
           + G I EAL+ F            V+                       M   D+ PD  
Sbjct: 572 IGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNF 631

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKE 542
            +  L+ GLCK  +   +L +    IEKG + PN   YT LV+G+        +  + +E
Sbjct: 632 TYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEE 691

Query: 543 LQLRQVVSES-AVERLVMQYDFEG 565
           +  + V  ++ A   ++ QY  +G
Sbjct: 692 MLNKDVEPDTVAFNVIIDQYSRKG 715



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 229/492 (46%), Gaps = 2/492 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   RD +    +L L+RM      P+ +    L+    +  K++ A KV + M    ++
Sbjct: 253 DNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLL 312

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P++ +Y  L+   C  GN+G A++L++ M  +G   N VTY +L+ GL            
Sbjct: 313 PNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSI 372

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L+R+   G+  +  +Y+ +++   K   +  A++LLDD++     P++V+++VL+ G  +
Sbjct: 373 LERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFR 432

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+   A      +   G  PN + Y+ L+ + C  G  +EA    A M+         T
Sbjct: 433 VGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFT 492

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
            N+L+ +   +GK + A   ++ M +    P++ +++ II    + G         D+M 
Sbjct: 493 CNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMN 552

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                P+  TY GL   LC  G + EA      L    N+     +   +TS CR G   
Sbjct: 553 SFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLS 612

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNAL 488
            A  L+ EM    F PD++TY++LI GLC +G I  AL +    +E+    P+   + +L
Sbjct: 613 DAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSL 672

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + GL K      +L +F+ M+ K   P+   + ++++  + + +     ++L  ++ + +
Sbjct: 673 VDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNL 732

Query: 549 VSESAVERLVMQ 560
               A   +++ 
Sbjct: 733 CFNLATYNILLH 744



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 228/523 (43%), Gaps = 41/523 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L +A   L+ M+     PDVV  + L+    +  K+  A ++M  M  +G++P+  
Sbjct: 397 KNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGI 456

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y+ L+   CK G +  A+     M   G+  +  T N LV   C  G L ++  F++ +
Sbjct: 457 LYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHM 516

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL PN+ T+  ++           A  + D + + G  P+L +Y  LL GLC  G  
Sbjct: 517 SRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHI 576

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA++FF  L       + V +N  L S C  G   +A  L+ EM   D  P   TY  L
Sbjct: 577 NEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNL 636

Query: 315 IGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           I  L   GK   AL +  + + KG   P+ A Y  ++  L   G     +   ++M ++ 
Sbjct: 637 IAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKD 696

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            +P+   +N +       GK  +   I+ ++ +K        Y  ++    ++    + F
Sbjct: 697 VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCF 756

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLC----------------MEGLI------------- 463
            L  +M ++GF PD +++ SLI G C                +EG +             
Sbjct: 757 MLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKF 816

Query: 464 ------EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
                 ++A E+   M ++   P+VD +NAL  GL ++     +  V Q+++E G +P  
Sbjct: 817 CERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTN 876

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQV----VSESAVER 556
             Y  L+ G+     ++ + ++  E++   +    V+ SA+ R
Sbjct: 877 KQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVR 919



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/548 (22%), Positives = 227/548 (41%), Gaps = 72/548 (13%)

Query: 79   LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            L +A      M   GH  D      L+   C+  K+++A   M  M   G+ P++ ++  
Sbjct: 471  LKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDC 530

Query: 139  LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL---- 194
            ++N     G+   A  + +KM  +G+  +  TY  L++GLC+ G++N++L+F  RL    
Sbjct: 531  IINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIP 590

Query: 195  -------------------------------IQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
                                           +    +P+ FTY+ L+    K+  + AA+
Sbjct: 591  NAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAAL 650

Query: 224  KLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             L    I KG   PN   Y  L+ GL K G    A+  F ++ +K  EP+ V++N+++  
Sbjct: 651  LLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQ 710

Query: 283  LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
               +G+  + N++L+ M   +    + TYNIL+   A          +  +M++  F P 
Sbjct: 711  YSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPD 770

Query: 343  AASYNPIIARLCSEGKVDLVVKCL---------------DQMFHRRCK------------ 375
              S++ +I   C     D+ +K L               + +  + C+            
Sbjct: 771  KFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVK 830

Query: 376  --------PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
                    PN  TYN L   L       +A  ++Q L    +    + Y  +I  +CR G
Sbjct: 831  QMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVG 890

Query: 427  KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
                A +L  EM   G +  +   S+++RGL     IE A+ +  +M E    P V  F 
Sbjct: 891  NIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFT 950

Query: 487  ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             L+   CK      +LE+  +M       +   Y +L+ G+    ++E + ++ +E++ R
Sbjct: 951  TLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQR 1010

Query: 547  QVVSESAV 554
             +   +++
Sbjct: 1011 DLWPNTSI 1018



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 176/390 (45%), Gaps = 7/390 (1%)

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           VG A+Q    M   G   +  T N ++  L     ++    F   ++ KG+ P+  T++ 
Sbjct: 121 VGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNI 180

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL A  +      A  LL  +   G  P  V+YN LL   CK+GR + A +    + SKG
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG 240

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
              +V +YN+ + +LC + R  +   LL  M      P  +TYN LI      GK + A 
Sbjct: 241 IGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVAT 300

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
           KV DEM      P++ +YN +IA  C+ G +   ++ +D M     +PNE TY   A+L 
Sbjct: 301 KVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYG--ALLN 358

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEF----YKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
           G+ K  E F ++ S+  +            Y  +I  LC+ G   +A QLL +M K    
Sbjct: 359 GLYKNAE-FGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVN 417

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  T+S LI G    G I  A EI   M +    P+   ++ L+   CK      +L  
Sbjct: 418 PDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNA 477

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           + +M   G + +  T  +LV       +LE
Sbjct: 478 YAVMNHSGHVADHFTCNVLVATFCRYGKLE 507



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 192/426 (45%), Gaps = 2/426 (0%)

Query: 103 NLLYDLCKANKM-KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           +LL  +C  N+M   A++   +M   G+ P   +   ++  L K+  V       + M  
Sbjct: 109 DLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLA 168

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   +  T+N L+  LC  G    +   L ++ + G+ P A TY+ LL    K+    A
Sbjct: 169 KGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKA 228

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A +L+D + +KG   ++ +YNV +  LC++ R+ +     + +      PN ++YN L+ 
Sbjct: 229 ASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLIS 288

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
               EG+ E A ++  EM   +  P  +TYN LI      G    AL+++D MV    RP
Sbjct: 289 GFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRP 348

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
           +  +Y  ++  L    +  +V   L++M     + +  +Y  +   LC  G ++EA  ++
Sbjct: 349 NEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLL 408

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             +     +     +  +I    R GK   A +++ +M K G  P+   YS+LI   C  
Sbjct: 409 DDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKM 468

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G ++EAL  + VM    +  D    N L+   C+  + + +      M   G  PN  T+
Sbjct: 469 GYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTF 528

Query: 521 TILVEG 526
             ++ G
Sbjct: 529 DCIING 534



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 155/342 (45%), Gaps = 34/342 (9%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N   +  L+    + R V  A++    +  +G  P++ + N++L  L KE + +    FF
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           + + +KG  P+V ++NILL +LC  G+++ A  LL +M+     PT VTYN L+      
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G+   A +++D M          +YN  I  LC + +       L +M      PNE TY
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITY 283

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
           N L                                  I+   R+GK   A ++  EM+ +
Sbjct: 284 NTL----------------------------------ISGFVREGKIEVATKVFDEMSLF 309

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
              P+S TY++LI G C  G I EAL +  VM  +  +P+   + ALL GL K+    + 
Sbjct: 310 NLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMV 369

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             + + M   G   +  +YT +++G+     LE + ++L ++
Sbjct: 370 SSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDM 411



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 170/421 (40%), Gaps = 37/421 (8%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDA 133
            R   L+DA   +  MV+    PD    TNL+  LCK  K+  A+ +    +  G++ P+ 
Sbjct: 607  RSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNP 666

Query: 134  SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV------------------------ 169
            + YT LV+ L K G+   A+ + E+M +     +TV                        
Sbjct: 667  AVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILST 726

Query: 170  -----------TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
                       TYN L+ G      + +       +I+ G +P+ F++  L+    + + 
Sbjct: 727  MKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKS 786

Query: 219  VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
               A+K+L  I  +G   +  ++N+L+T  C+    ++A    + +      PNV +YN 
Sbjct: 787  FDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNA 846

Query: 279  LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
            L   L     + +A+ +L  +      PT   Y  LI  +   G    A+K+ DEM    
Sbjct: 847  LFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLG 906

Query: 339  FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML-CGVGKVQEAF 397
                  + + I+  L +  K++  +  LD M   +  P   T+  L  + C    V +A 
Sbjct: 907  ISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKAL 966

Query: 398  AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
             +   + +         Y  +I+ LC  G    AF+L  EM +    P++  Y  LI   
Sbjct: 967  ELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026

Query: 458  C 458
            C
Sbjct: 1027 C 1027



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 129/281 (45%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            + H +   F+  + M+  G  PD     +L+   C++     AIK++  +   G + D  
Sbjct: 748  KRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRF 807

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++  L+   C++  +  A +LV++M  +    N  TYN+L  GL    + +++ + L  L
Sbjct: 808  TFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVL 867

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ G VP    Y  L+    +   +  AMKL D++   G   + V+ + ++ GL    + 
Sbjct: 868  LESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKI 927

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            E AI     +      P V ++  L+   C E    +A EL + M+       +V YN+L
Sbjct: 928  ENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVL 987

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
            I  L  +G  + A K+ +EM +    P+ + Y  +I   C+
Sbjct: 988  ISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCA 1028



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 3/279 (1%)

Query: 272 NVVSYNILLRSLCMEGRW-EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           N   +++L+R +C+  R   +A +    M     +P++ T N+++GSL    K D     
Sbjct: 104 NPAVFDLLIR-VCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSF 162

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCG 389
              M+     P  A++N ++  LC  GK       L +M      P   TYN L    C 
Sbjct: 163 FKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCK 222

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            G+ + A  +I  + +K        Y   I +LCR  ++ + + LL  M +    P+  T
Sbjct: 223 KGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEIT 282

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y++LI G   EG IE A ++F  M  ++  P+   +N L+ G C +     +L +  +M+
Sbjct: 283 YNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMV 342

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             G  PNE TY  L+ G+    E  + + +L+ +++  V
Sbjct: 343 SHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGV 381



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 41/191 (21%)

Query: 74   HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-------------- 119
            H+ H++      L+ ++  G  P   Q   L+  +C+   +K A+K              
Sbjct: 858  HKAHRV------LQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHN 911

Query: 120  ---------------------VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
                                 V+++M+   IIP  +++T L++  CK+ NV  A++L   
Sbjct: 912  VAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSI 971

Query: 159  MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
            ME      + V YN L+ GLC  G++  + +  + + Q+ L PN   Y  L+++      
Sbjct: 972  MEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNY 1031

Query: 219  VHAAMKLLDDI 229
               + KLL DI
Sbjct: 1032 QIESEKLLRDI 1042



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 77/215 (35%), Gaps = 36/215 (16%)

Query: 374 CKPNEGTYNGLAMLCGVGK-VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C  N   ++ L  +C   + V +A      +G +  +        V+ SL ++ K    +
Sbjct: 101 CNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFW 160

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
                M   G  PD  T++ L+  LC  G  + A  +   MEE    P    +N LL   
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWY 220

Query: 493 CKSRRTDLSLEVFQMMIEKG-----------------------------------QMPNE 517
           CK  R   + ++   M  KG                                     PNE
Sbjct: 221 CKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNE 280

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            TY  L+ G   + ++E++ +V  E+ L  ++  S
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNS 315


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 183/377 (48%), Gaps = 34/377 (9%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           H+++     L +++  G +P +V  T LL  LC   KM + + + + M+  G+ P+  +Y
Sbjct: 111 HRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTY 170

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             ++N L K G    A+  +++ME  G   N V Y++L+ G C+ G ++++    D ++ 
Sbjct: 171 NVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVS 230

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG  PN +TY+ L+    K   +  A++LLD+ + KG  P++V++  +++GLC+ GR   
Sbjct: 231 KGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLA 290

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A + FR + + G  PN+++Y +LL  LC  G  EEA  L  EM      P +V Y ILI 
Sbjct: 291 AQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILID 350

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           SL   GK     ++   ++    +P+  +Y  ++  LC EG +    K   +M    C P
Sbjct: 351 SLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTP 410

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           ++  YN                IIQ  G  Q+  P                   A QL+ 
Sbjct: 411 DKCAYN---------------VIIQ--GFLQHKDPS-----------------MARQLVE 436

Query: 437 EMTKYGFTPDSYTYSSL 453
           EM   GF+ D+ T + L
Sbjct: 437 EMVNRGFSADAATRALL 453



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 204/412 (49%), Gaps = 9/412 (2%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A+    +M+    +P    ++ L + + + G+    + L +++E  G   +  + + L+ 
Sbjct: 46  ALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILIN 105

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             C L  ++  L  L ++++ GL P+  T++ LL     E  +   M L DD++ +G +P
Sbjct: 106 CFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQP 165

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N+ +YNV++  L K G+  EA+ F + +   G  PNVV+Y+ L+   C+ G+ +EA  + 
Sbjct: 166 NVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVF 225

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
             M     +P + TY  L+       + + A+++LDE ++    P   ++  II+ LC  
Sbjct: 226 DLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRA 285

Query: 357 GKVDLVVKCLDQMFHRRCK----PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP 411
           G+  L  +   Q+F   C     PN  TY  L   LC  G ++EAFA+ Q +        
Sbjct: 286 GR-PLAAQ---QLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I SLC+ GK     +L   +   G  P+ YTY++L+  LC EGLI EA ++F 
Sbjct: 342 LVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFR 401

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            MEE    PD   +N ++ G  + +   ++ ++ + M+ +G   +  T  +L
Sbjct: 402 KMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 181/379 (47%), Gaps = 1/379 (0%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA      M+ +   P +V+ + L   + +    +  + + + +   GI  D  S + L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +NC C    V + + ++ K+   G   + VT+ +L+ GLCM G ++Q +   D ++ +GL
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PN +TY+ ++ +  K    + A+  L  +   G  PN+V+Y+ L+ G C  G+ +EA  
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F  + SKG  PNV +Y  L+   C   R EEA +LL E       P IVT+  +I  L 
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G+   A ++   +      P+  +Y  ++  LC  G ++       +M     KPN  
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 380 TYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            Y  L   LC  GK+++   +   L ++        Y  ++ +LC++G   +A +L  +M
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 439 TKYGFTPDSYTYSSLIRGL 457
            + G TPD   Y+ +I+G 
Sbjct: 404 EEDGCTPDKCAYNVIIQGF 422



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 189/382 (49%), Gaps = 13/382 (3%)

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
           L++ ++FL      G+  +  + S L+        V   + +L  I+  G +P++V++  
Sbjct: 84  LSKEIEFL------GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTT 137

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           LL GLC EG+ ++ +  + D+  +G +PNV +YN+++ SL   G+  EA   L +M+   
Sbjct: 138 LLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVG 197

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
             P +V Y+ LI      G+ D A  V D MV     P+  +Y  ++   C   +++  V
Sbjct: 198 CVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAV 257

Query: 364 KCLDQMFHRRCKPNEGTYNGL-AMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVI 419
           + LD+   +   P+  T+  + + LC  G+    Q+ F  I + G+  N      Y  ++
Sbjct: 258 QLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMT---YGVLL 314

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
             LC+ G   +AF L  EM +    P+   Y+ LI  LC  G I++  E+F  + +   K
Sbjct: 315 DGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLK 374

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P+V  + AL+  LCK      + ++F+ M E G  P++  Y ++++G     +  ++ ++
Sbjct: 375 PNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQL 434

Query: 540 LKELQLRQVVSESAVERLVMQY 561
           ++E+  R   +++A   L+  +
Sbjct: 435 VEEMVNRGFSADAATRALLNDF 456



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 159/332 (47%), Gaps = 1/332 (0%)

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +P    +S L  +  +       + L  +I   G + ++ S ++L+   C   R +  + 
Sbjct: 59  LPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLS 118

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               +   G EP++V++  LL  LCMEG+ ++   L  +M      P + TYN++I SL+
Sbjct: 119 VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLS 178

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             GK + AL  L +M K    P+  +Y+ +I   C  G++D      D M  + C PN  
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TY  L    C + +++EA  ++     K        +  +I+ LCR G+   A QL   +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
             +G TP+  TY  L+ GLC  G +EEA  +F  M+    KP++  +  L+  LCK  + 
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
               E+F  +I++G  PN  TYT LV  +  +
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKE 390


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 193/419 (46%), Gaps = 10/419 (2%)

Query: 64  RKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM 123
           R PG     R       +AF  + R  + G +PD      L+   C+  + ++A  ++  
Sbjct: 155 RHPGCFAHAR-------EAFDGMAR-AAGGVRPDHRSFRALVLGCCREGRFEEADALLAA 206

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M + G   D+++ T +V   C++G       L  +M + G P N V Y++ + GLC  G 
Sbjct: 207 MWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGY 266

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYN 242
           + Q+   L+ ++ KGL PN +T++ L++   K   +  A +L   ++     KPN+ +Y 
Sbjct: 267 VKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYT 326

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           V++ G CKEG+   A      +  +G  PN  +Y  L+   C  G ++ A EL+ +M   
Sbjct: 327 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLE 386

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
              P I TYN +IG     GK   A KVL             +Y  +I   C +G +   
Sbjct: 387 GFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCA 446

Query: 363 VKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
           +    QM  + C P+  TY   +AM C   +++++  +     +      ++ Y  +I  
Sbjct: 447 LDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAG 506

Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            CR GK   A ++   M ++G  PDS TY +LI  LC E  +EEA  +F  M +    P
Sbjct: 507 YCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVP 565



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 195/425 (45%), Gaps = 2/425 (0%)

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
            + G+ PD  S+  LV   C++G    A  L+  M   G+  ++ T   +VR  C  G  
Sbjct: 173 AAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRF 232

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
                   R+ + G  PN   YS  ++   +   V  A  +L++++ KG KPN+ ++  L
Sbjct: 233 RNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSL 292

Query: 245 LTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           + GLCK G  E A R F  L  S  ++PNV +Y +++   C EG+   A  LL  M    
Sbjct: 293 IDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 352

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
            +P   TY  LI      G  D A +++++M    F P+  +YN II   C +GK+    
Sbjct: 353 LAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAY 412

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           K L     +    ++ TY  L    C  G +  A  + + +  K        Y  +I   
Sbjct: 413 KVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMY 472

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C++ +  Q+ QL  +    G  P   TY+S+I G C  G +  AL++F  M ++   PD 
Sbjct: 473 CQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDS 532

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             + AL+  LCK  R + +  +F+ M++K  +P + T   L      +D++ ++   L  
Sbjct: 533 ITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDR 592

Query: 543 LQLRQ 547
           L  RQ
Sbjct: 593 LDKRQ 597



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 206/474 (43%), Gaps = 5/474 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +  +A   L  M ++G   D    T ++   C+  + +    +   M   G  P+  
Sbjct: 193 REGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMV 252

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+  ++ LC++G V  A  ++E+M   G   N  T+ SL+ GLC +G + ++ +   +L
Sbjct: 253 NYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKL 312

Query: 195 IQ-KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++     PN  TY+ ++    KE  +  A  LL  ++ +G  PN  +Y  L+ G CK G 
Sbjct: 313 VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGS 372

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A      +  +GF PN+ +YN ++   C +G+ +EA ++L            VTY I
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTI 432

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G    AL +  +M +    P   +Y  IIA  C + +++   +  D+     
Sbjct: 433 LITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P + TY  + A  C +GK+  A  + + +           Y  +I+SLC++ +  +A 
Sbjct: 493 LVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEAR 552

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            L   M      P   T  +L    C    I  A+     ++  D +      +AL+  L
Sbjct: 553 ALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSF---LDRLDKRQQAHTADALVRKL 609

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
                 D +    + +++K    +  TYT  +      +   L++E+ +++  R
Sbjct: 610 STVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKR 663


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 212/457 (46%), Gaps = 34/457 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E M  KG KP+      ++  LCK  K+ +A +V+  M+S GI PD   YT L++  CK
Sbjct: 211 IEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK 270

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GNV  A +L ++M+      + +TY +++ GLC  G + ++ +    ++ K L P+  T
Sbjct: 271 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 330

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++   KE  +  A  L + ++  G  PN+V+Y  L  GLCK G  + A     ++ 
Sbjct: 331 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 390

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG E N+ +YN L+  LC  G  ++A +L+ +M+     P  VTY  L+ +     +  
Sbjct: 391 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMV 450

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++L +M+    +P+  ++N ++   C  G ++   K L  M  +   PN  TYN L 
Sbjct: 451 RAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL- 509

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
                                            I   C +       ++   M   G  P
Sbjct: 510 ---------------------------------IKQYCIRNNMRATTEIYRGMCAKGVVP 536

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  TY+ LI+G C    ++EA  +   M    +   V ++NAL+ G  K ++   + E+F
Sbjct: 537 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 596

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           + M  +G + +   Y I  +    + ++EL+ E+  E
Sbjct: 597 EQMRREGLVADREIYNIFADINYDEGKMELTLELCDE 633



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 209/454 (46%), Gaps = 34/454 (7%)

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT 170
           A K +  +K++E M   G+ P+  +Y  ++  LCK G V  A +++ +M   G   + V 
Sbjct: 201 ALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 260

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           Y +L+ G C LGN++ + +  D + ++ + P+  TY+ ++    +   V  A KL  +++
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            K  +P+ V+Y  L+ G CKEG+ +EA      +   G  PN+V+Y  L   LC  G  +
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 380

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            ANELL EM        I TYN L+  L   G  D A+K++ +M    F P A +Y  ++
Sbjct: 381 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 440

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSS 410
              C   ++    + L QM  R  +P   T+N L                          
Sbjct: 441 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL-------------------------- 474

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
                   +   C  G      +LL  M + G  P++ TY+SLI+  C+   +    EI+
Sbjct: 475 --------MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 526

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M      PD + +N L+ G CK+R    +  + + M+ KG     ++Y  L++G   +
Sbjct: 527 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 586

Query: 531 DELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
            +   + E+ ++++   +V++  +  +    +++
Sbjct: 587 KKFLEARELFEQMRREGLVADREIYNIFADINYD 620



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 192/393 (48%), Gaps = 1/393 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+ +A   L  M+S+G  PD V  T L+   CK   +  A ++ + M    I PD  +YT
Sbjct: 238 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYT 297

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC+ G V  A +L  +M       + VTY +L+ G C  G + ++    ++++Q 
Sbjct: 298 AVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 357

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN  TY+ L +   K   V  A +LL ++  KG + N+ +YN L+ GLCK G  ++A
Sbjct: 358 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 417

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++  +D+   GF P+ V+Y  L+ + C       A+ELL +M   +  PT+VT+N+L+  
Sbjct: 418 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 477

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G  +   K+L  M++    P+A +YN +I + C    +    +    M  +   P+
Sbjct: 478 FCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD 537

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TYN L    C    ++EA+ + + +  K  +     Y  +I    ++ K  +A +L  
Sbjct: 538 GNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFE 597

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           +M + G   D   Y+        EG +E  LE+
Sbjct: 598 QMRREGLVADREIYNIFADINYDEGKMELTLEL 630



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 35/297 (11%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +AF    +M+  G  P++V  T L   LCK  ++  A +++  M   G+  +  
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY----------------------- 171
           +Y  LVN LCK GN+  A++L++ ME  G+  + VTY                       
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459

Query: 172 ------------NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
                       N L+ G CM G L    + L  +++KG++PNA TY+ L++       +
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 519

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
            A  ++   + AKG  P+  +YN+L+ G CK    +EA    RD+  KGF   V SYN L
Sbjct: 520 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 579

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           ++      ++ EA EL  +M           YNI        GK +  L++ DE ++
Sbjct: 580 IKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 636



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 143/302 (47%), Gaps = 12/302 (3%)

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSL---------CMEGRWEEANELLAEMDGGDRSPT 307
           A + F  + + G   +V S N+ +  L          ++G W    +L+ EM      P 
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEW--VLKLIEEMQIKGLKPN 222

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
             TYN +I  L   GK   A +VL EM+     P    Y  +I   C  G V    +  D
Sbjct: 223 PYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFD 282

Query: 368 QMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M  R+  P+  TY   +  LC  G+V EA  +   +  K+    +  Y  +I   C++G
Sbjct: 283 EMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG 342

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           K  +AF L  +M + G TP+  TY++L  GLC  G ++ A E+   M     + ++  +N
Sbjct: 343 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 402

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           +L+ GLCK+   D ++++ + M   G  P+  TYT L++      E+  + E+L+++  R
Sbjct: 403 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 462

Query: 547 QV 548
           ++
Sbjct: 463 EL 464


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 215/471 (45%), Gaps = 53/471 (11%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKAN----KMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           ++M  +G KP++     L+Y  C+      ++ +A    + +V+ G   D  SY  L++ 
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LCK G    A+ L+++++      N V YN+++ G+C   ++N +      ++ KG+ PN
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TYS L+   +    +  A+ L + II +  KP+  ++N+L+ G CK+ + +E    F 
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFA 289

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  +G  P+VV+YN L+   C+      A  +   M  G  +P I +YNILI       
Sbjct: 290 MMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIK 349

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A+ + +EM      P+  +YN +I  L   G++   ++ +DQM  R   PN  TYN
Sbjct: 350 KVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYN 409

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
                                              +I +L +  +  +A  L+ +    G
Sbjct: 410 S----------------------------------IIDALFKTHQVDKAIALITKFKDQG 435

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             P  YTY+ LI GLC              +E YD    V+ +N ++ G CK    D +L
Sbjct: 436 IQPSMYTYTILIDGLCK-------------VEGYDIT--VNTYNVMIHGFCKKGLFDEAL 480

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
            +   M +   +PN  TY I +  +   +E + + ++ +E+  R +++ SA
Sbjct: 481 SLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSA 531



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 193/393 (49%), Gaps = 14/393 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ AFL  +++V+ G   D V    L++ LCK  + + A+ +++ +    +  +A  Y 
Sbjct: 140 QIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYN 199

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  +CK  +V  A  L  +M   G   N VTY++L+ G  ++G L  ++   +++I +
Sbjct: 200 TVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILE 259

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + P+ +T++ L++   K+R +     +   ++ +G  P++V+YN L+ G C       A
Sbjct: 260 NIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTA 319

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +   G  P++ SYNIL+   C   + ++A  L  EM   +  P +VTYN LI  
Sbjct: 320 KSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDG 379

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L+  G+  +AL+++D+M      P+  +YN II  L    +VD  +  + +   +  +P+
Sbjct: 380 LSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPS 439

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             TY    ++ G+ KV+     + +            Y  +I   C+KG   +A  LL +
Sbjct: 440 MYTYT--ILIDGLCKVEGYDITVNT------------YNVMIHGFCKKGLFDEALSLLSK 485

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           M      P++ TY   IR L      ++A ++F
Sbjct: 486 MKDSSCIPNAVTYEITIRSLLDNNENDKAEKLF 518



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 184/428 (42%), Gaps = 32/428 (7%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  A+ +   ++     P A  +  ++  L K  +    + L +KME  G   N    
Sbjct: 65  NDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNC 124

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+   C LG                L+P                 +H A    D ++A
Sbjct: 125 NILIYCFCQLG----------------LIPCQ---------------IHQAFLFHDKLVA 153

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G   + VSY  L+ GLCK G T  A+   + +  K  + N V YN ++  +C +    +
Sbjct: 154 LGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVND 213

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A +L +EM     SP +VTY+ LI      GK   A+ + ++++    +P   ++N ++ 
Sbjct: 214 AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 273

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
             C + K+         M  +   P+  TYN L    C V +V  A +I  ++     + 
Sbjct: 274 GFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNP 333

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+  K  +A  L  EM      P+  TY+SLI GL   G I  AL++ 
Sbjct: 334 DIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLV 393

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M +    P++  +N+++  L K+ + D ++ +     ++G  P+  TYTIL++G+   
Sbjct: 394 DQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV 453

Query: 531 DELELSAE 538
           +  +++  
Sbjct: 454 EGYDITVN 461



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 15/272 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D K+ +       M+ +G  PDVV   +L+   C   ++  A  +   M   G+ PD  
Sbjct: 277 KDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIR 336

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+N  CK   V  AM L  +M       N VTYNSL+ GL   G ++ +LQ +D++
Sbjct: 337 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 396

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+ PN  TY+ +++A +K   V  A+ L+     +G +P++ +Y +L+ GLCK    
Sbjct: 397 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK---- 452

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
                       +G++  V +YN+++   C +G ++EA  LL++M      P  VTY I 
Sbjct: 453 -----------VEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEIT 501

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           I SL  + + D A K+  EM+       +ASY
Sbjct: 502 IRSLLDNNENDKAEKLFREMITRGLLNRSASY 533



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 160/346 (46%), Gaps = 29/346 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  +NDAF     MVSKG  P+VV  + L+       K+K AI +   ++   I PD  
Sbjct: 207 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGY 266

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  LV+  CK   +     +   M   G   + VTYNSL+ G C++  +N +    + +
Sbjct: 267 TFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTM 326

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q G+ P+  +Y+ L+    K + V  AM L +++  K   PN+V+YN L+ GL K GR 
Sbjct: 327 AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRI 386

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A++    +  +G  PN+++YN ++ +L    + ++A  L+ +       P++ TY IL
Sbjct: 387 SYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTIL 446

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L                V+G +  +  +YN +I   C +G  D  +  L +M    C
Sbjct: 447 IDGLC--------------KVEG-YDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSC 491

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
            PN  TY                 I   L N +N   ++ ++ +IT
Sbjct: 492 IPNAVTY--------------EITIRSLLDNNENDKAEKLFREMIT 523



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 169/386 (43%), Gaps = 38/386 (9%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N ++Y+S         +++ ++   +RL+++   P AF ++ +L +  K +  H  + L 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEG----RTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             +  +G KPNL + N+L+   C+ G    +  +A  F   L + GF  + VSY  L+  
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC  G    A +LL  +DG       V YN +I  +      + A  +  EMV     P+
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
             +Y+ +I+     GK+   +   +++     KP+  T+N L                  
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNIL------------------ 271

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
                           +   C+  K  +   +   M K G  PD  TY+SL+ G C+   
Sbjct: 272 ----------------VDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKE 315

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +  A  IF  M +    PD+ ++N L+ G CK ++ D ++ +F  M  K  +PN  TY  
Sbjct: 316 VNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNS 375

Query: 523 LVEGIAHQDELELSAEVLKELQLRQV 548
           L++G++    +  + +++ ++  R V
Sbjct: 376 LIDGLSKSGRISYALQLVDQMHDRGV 401



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 134/320 (41%), Gaps = 5/320 (1%)

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
           K N +SY+   T        ++A+  F  L  +   P    +N +L SL     +     
Sbjct: 48  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHG----KTDHALKVLDEMVKGRFRPSAASYNPII 350
           L  +M+     P +   NILI      G    +   A    D++V   F     SY  +I
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
             LC  G+    +  L ++  +  + N   YN +   +C    V +AF +   + +K  S
Sbjct: 168 HGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS 227

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  +I+     GK   A  L  ++      PD YT++ L+ G C +  ++E   +
Sbjct: 228 PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV 287

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           F +M +    PDV  +N+L+ G C  +  + +  +F  M + G  P+  +Y IL+ G   
Sbjct: 288 FAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK 347

Query: 530 QDELELSAEVLKELQLRQVV 549
             +++ +  +  E+  + ++
Sbjct: 348 IKKVDKAMNLFNEMHCKNII 367


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 208/441 (47%), Gaps = 1/441 (0%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           C+   +  A  ++  M S G+   A  Y  L+  LC+   V  A+++   M + G   + 
Sbjct: 206 CEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADE 265

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           VTY +LV G C    L  +L+  D ++    VP+  + SF+++   K   +  A +L   
Sbjct: 266 VTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACH 325

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +   G  PNL + N L+  LCK+ R  EA R FR + ++G EPN V+Y IL+ SLC  G 
Sbjct: 326 LGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGM 385

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            ++A  +   M       T+  YN LI     H     A  +L+EMV+    PSAASY+P
Sbjct: 386 MDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSP 445

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQ 407
           +IA LC +G +   ++   +M       N  T+  L +  C  G + EA  +   + +  
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
               +  +  +I   CR G   +AFQL  +M   G TPD+YTY SLI  LC+     +A 
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAK 565

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           E    +E      +  +   L+ G CK  R   +  ++  M  +G   +  ++T++V   
Sbjct: 566 EFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAA 625

Query: 528 AHQDELELSAEVLKELQLRQV 548
               + E  + + +E++ + V
Sbjct: 626 LKLHDGEKISVLFREMKEKGV 646



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 216/441 (48%), Gaps = 1/441 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM SKG K   V    L+Y LC+ N++ +A++V   MV  GI+ D  +Y  LV   C+
Sbjct: 218 LTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCR 277

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
              +  A+++ + M    +  +  + + +V GL   G+++++ +    L + G+VPN F 
Sbjct: 278 TEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFA 337

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
            + L++   K+R    A +L   +  +G +PN V+Y +L+  LCK G  ++A+  F  + 
Sbjct: 338 CNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMR 397

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG    V  YN L+   C    + +A  LL EM     +P+  +Y+ LI  L   G   
Sbjct: 398 EKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLA 457

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+++  EM +     +  ++  +I+  C +G +D   +  D+M      PNE T+N + 
Sbjct: 458 SAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMI 517

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C VG V++AF +   + ++  +     Y+ +I+ LC      +A + + ++      
Sbjct: 518 EGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVV 577

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            +S++ ++L+ G C EG + E   I+  M     K D+ +F  ++    K    +    +
Sbjct: 578 LNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVL 637

Query: 505 FQMMIEKGQMPNETTYTILVE 525
           F+ M EKG  P+   +T +++
Sbjct: 638 FREMKEKGVKPDNVFHTCMID 658



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 201/438 (45%), Gaps = 49/438 (11%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  MV KG  P     + L+  LC+   +  A+++   M  +G+  +  ++T L++  CK
Sbjct: 428 LNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCK 487

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A +L +KM D     N VT+N ++ G C +GN+ ++ Q  D+++ +GL P+ +T
Sbjct: 488 DGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYT 547

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+       G   A + +DD+       N  S   L+ G CKEGR  E    + ++ 
Sbjct: 548 YRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMR 607

Query: 266 SKGFEPNVVSY----------------NILLRSL-------------CMEGRWEEANELL 296
           ++G + +++S+                ++L R +             CM     +   ++
Sbjct: 608 ARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIV 667

Query: 297 AEMDGGDR------SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
             ++  D+      SP +VTY +LI  L   G    A  + +EM+ GRF P++ +YN  +
Sbjct: 668 QALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFL 727

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
             L +EG+++   K L       C  N  T+N L    C  G++Q A  ++      QN+
Sbjct: 728 DFLANEGELE-KAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLM------QNN 780

Query: 410 SPQEF------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
           +   F      Y  +I  LC+ G   +AFQL  EM   G  PD   Y+ LIR   + G  
Sbjct: 781 TESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEF 840

Query: 464 EEALEIFVVMEEYDYKPD 481
           ++ L I+  M    Y  D
Sbjct: 841 DKGLGIYSDMVNLKYADD 858



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 216/458 (47%), Gaps = 4/458 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA    +RM  KG +  V    +L+   C+ +   +A  ++  MV  G+ P A+SY+ 
Sbjct: 386 MDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSP 445

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  LC+KG++  AM+L  +M   G   N  T+ +L+ G C  GN++++ +  D++I   
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +VPN  T++ ++E   +   V  A +L D ++ +G  P+  +Y  L++ LC      +A 
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAK 565

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI-GS 317
            F  DL +     N  S   L+   C EGR  E   +  EM        ++++ +++  +
Sbjct: 566 EFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAA 625

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L  H     ++ +  EM +   +P    +  +I     E  +   + C D+M    C PN
Sbjct: 626 LKLHDGEKISV-LFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPN 684

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY  L   LC  G +  A  + + +   +       Y   +  L  +G+  +A ++L+
Sbjct: 685 VVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLH 743

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
                G   ++ T+++LI+G C  G I+ A+++     E  + PD  +++ ++  LCK  
Sbjct: 744 ATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVG 803

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
             + + +++  M+ KG  P+   Y IL+       E +
Sbjct: 804 DINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFD 841



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 215/473 (45%), Gaps = 4/473 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R++++ +A      MV +G   D V    L+Y  C+  +++ A+++ + M+S   +P  +
Sbjct: 242 RNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVA 301

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S +++V+ L K+G++  A +L   + + G   N    N+L+  LC      ++ +    +
Sbjct: 302 SCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGM 361

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +GL PN  TY+ L+ +  K   +  A+ + D +  KG +  +  YN L+ G C+    
Sbjct: 362 ANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNF 421

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A     ++  KG  P+  SY+ L+  LC +G    A EL  EM     S  + T+  L
Sbjct: 422 HQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTL 481

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G  D A ++ D+M+     P+  ++N +I   C  G V    +  DQM  R  
Sbjct: 482 ISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY  L ++LC      +A   +  L N            ++   C++G+  + + 
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL- 492
           +  EM   G   D  +++ ++         E+   +F  M+E   KPD + F+  ++ + 
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPD-NVFHTCMIDVH 660

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            K      +L  +  MI  G  PN  TYT+L+  +     L  SA++L E  L
Sbjct: 661 SKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLS-SAQILCEEML 712



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 188/416 (45%), Gaps = 1/416 (0%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +  + + A  V+ + +SSGI     + + ++  L K      A  L ++M    +P +  
Sbjct: 137 RLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEY 196

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            Y + +R  C + NL+ +   L R+  KG+  +A  Y+ L+    +   V  A+++ + +
Sbjct: 197 VYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSM 256

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           + +G   + V+Y  L+ G C+    E A+    D+ S  F P+V S + ++  L   G  
Sbjct: 257 VERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHI 316

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           ++A  L   +      P +   N LI  L    +   A ++   M      P+  +Y  +
Sbjct: 317 DKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I  LC  G +D  +   D+M  +  +     YN L    C      +A  ++  +  K  
Sbjct: 377 IHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGL 436

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +     Y  +I  LCRKG    A +L  EM + G + + YT+++LI G C +G ++EA  
Sbjct: 437 APSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAAR 496

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +F  M +    P+   FN ++ G C+      + +++  M+++G  P+  TY  L+
Sbjct: 497 LFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 159/367 (43%), Gaps = 37/367 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  +++A    ++M+     P+ V    ++   C+   ++KA ++ + MV  G+ PD  
Sbjct: 487 KDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNY 546

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LC       A + V+ +E+     N+ +  +L+ G C  G L ++    D +
Sbjct: 547 TYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEM 606

Query: 195 -----------------------------------IQKGLVPNAFTYSFLLEAAYKERGV 219
                                               +KG+ P+   ++ +++   KE  +
Sbjct: 607 RARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENI 666

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A+   D +IA G  PN+V+Y VL+  LCK G    A     ++    F PN  +YN  
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCF 726

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           L  L  EG  E+A  L A +  G  + T VT+N LI      G+   A+ ++    +  F
Sbjct: 727 LDFLANEGELEKAKVLHATILEGCLANT-VTFNTLIKGFCKAGQIQGAIDLMQNNTESGF 785

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFA 398
            P   SY+ II  LC  G ++   +  ++M ++  KP+   YN L   C + G+  +   
Sbjct: 786 FPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLG 845

Query: 399 IIQSLGN 405
           I   + N
Sbjct: 846 IYSDMVN 852



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 133/265 (50%), Gaps = 1/265 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L + +   + M ++G K D++  T ++Y   K +  +K   +   M   G+ PD  
Sbjct: 592 KEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNV 651

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +T +++   K+ N+  A+   +KM   G   N VTY  L+  LC  G L+ +    + +
Sbjct: 652 FHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM 711

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +    +PN+FTY+  L+    E  +  A K+L   I +G   N V++N L+ G CK G+ 
Sbjct: 712 LVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQI 770

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + AI   ++    GF P+ +SY+ ++  LC  G   +A +L  EM      P IV YNIL
Sbjct: 771 QGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNIL 830

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRF 339
           I     HG+ D  L +  +MV  ++
Sbjct: 831 IRWCNIHGEFDKGLGIYSDMVNLKY 855



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 149/356 (41%), Gaps = 1/356 (0%)

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+    +T S +L A  K R    A  L D+++      +   Y   +   C+    
Sbjct: 152 LSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNL 211

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A      + SKG + + V YN+L+  LC   R  EA E+   M         VTY  L
Sbjct: 212 DGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTL 271

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +       + + AL++ D+M+   F PS AS + ++  L   G +D   +    +     
Sbjct: 272 VYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGM 331

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN    N L   LC   + +EA  + + + N+     +  Y  +I SLC++G    A  
Sbjct: 332 VPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALC 391

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M + G     Y Y+SLI G C      +A  +   M E    P   +++ L+ GLC
Sbjct: 392 MFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLC 451

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           +      ++E+ + M   G   N  T+T L+ G      ++ +A +  ++    VV
Sbjct: 452 RKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVV 507



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 101/194 (52%), Gaps = 1/194 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  +  A    ++M++ G  P+VV  T L+  LCK+  +  A  + E M+    +
Sbjct: 658 DVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFL 717

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P++ +Y   ++ L  +G +  A  L   + + G   NTVT+N+L++G C  G +  ++  
Sbjct: 718 PNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDL 776

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +    + G  P+  +YS ++    K   ++ A +L ++++ KG KP++V+YN+L+     
Sbjct: 777 MQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNI 836

Query: 251 EGRTEEAIRFFRDL 264
            G  ++ +  + D+
Sbjct: 837 HGEFDKGLGIYSDM 850


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 214/444 (48%), Gaps = 38/444 (8%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           +P +   T L+  LCKA+K+++A  V E M+  G  PD  +Y+ L++ L K G V  A +
Sbjct: 195 EPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARK 254

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           LV+ M   G P   V Y S+V GLC  G + ++++ +  + ++ L P   TYSF++    
Sbjct: 255 LVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYI 314

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
               V  A  +++++  +   P+ +SY + +  L   GR EEA + F  +  KG +P++ 
Sbjct: 315 GMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMH 374

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y I++ + C EG    A  +L  MD     P    Y +++       + + AL++   +
Sbjct: 375 TYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI 434

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR--CKPNEGTYNGLAMLCGVGK 392
           +K    PS  +YN +I  LC   K+D  ++ L +M  R+   +P+  TY+   ++ G+GK
Sbjct: 435 LKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS--MIIHGLGK 492

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           V                                G   +AF LL EM   G  PD +TY+S
Sbjct: 493 V--------------------------------GMEERAFDLLAEMIDNGVIPDCFTYTS 520

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI+ L   G +  A+E+   M +    PD   +  L+  LC+S   D + ++ Q M+  G
Sbjct: 521 LIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNG 579

Query: 513 QMPNETTYTILVEGIAHQ-DELEL 535
             PNE T+  + +G   Q D L L
Sbjct: 580 HTPNEFTFKAVEKGFRLQLDRLSL 603



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 189/384 (49%), Gaps = 4/384 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           HK+  A    E M+ KG+KPD++  ++L+  L KA ++ +A K++++MV+ G  P A +Y
Sbjct: 212 HKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAY 271

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T +V  LCK G +  A++ +++M          TY+ +V G   +G + ++   ++ +  
Sbjct: 272 TSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMAD 331

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +   P+  +Y+  +EA Y       A K+ + ++ KG KP++ +Y +++   CKEG    
Sbjct: 332 RDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAA 391

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A    R +     +PN   Y +++       R EEA EL   +      P+ VTYN +I 
Sbjct: 392 ATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVIN 451

Query: 317 SLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +L    K D AL++L EM + +    PS  +Y+ II  L   G  +     L +M     
Sbjct: 452 ALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGV 511

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TY  L   L G GKV  A  +++ +           Y  ++  LCR      A+ 
Sbjct: 512 IPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWD 570

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGL 457
           LL EM + G TP+ +T+ ++ +G 
Sbjct: 571 LLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 198/386 (51%), Gaps = 4/386 (1%)

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+     T NSL+  L   G+L+ +L F    I +   PN  +++ LL            
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVV 147

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             LL ++ ++G   N  ++ V+L+ LC     ++A+ +F  +     EP + +Y +L+  
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDG 207

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           LC   + E A ++  EM      P I+ Y+ LI  L+  G+ D A K++D MV     P+
Sbjct: 208 LCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPT 267

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
           A +Y  I+A LC  G++   VK + +M  RR +P   TY+ +     G+GKV++AFA+++
Sbjct: 268 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVME 327

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            + ++  +     Y   I +L   G+  +A ++   M + G  PD +TY  +I   C EG
Sbjct: 328 EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG 387

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            +  A  +  +M++   KP+   +  ++ G  KS R + +LE++Q +++ G +P+  TY 
Sbjct: 388 SMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYN 447

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQ 547
            ++  +    +++ + E+L+E+Q R+
Sbjct: 448 TVINALCKLKKMDEALELLREMQRRK 473


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 214/458 (46%), Gaps = 21/458 (4%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P + +   +   L K N     I +   M   GI  D  +   LVNC C  G V    ++
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 156 VEKMEDY------GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
            E +  +      G+  N V+Y +L+ GLC  G    ++Q L  +    + PN   YS +
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           + +  K++ V  A  L   ++ K   P++++YN L+ G    GR +EA+  F  +  K  
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
           +P++ ++NIL+  LC EG  ++A  +LA M      P ++TYN L+       + + A  
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLC 388
           V + M +    P   SY+ +I  LC    VD  V  L +M  +   PN  TY+ L   L 
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             G++ +A+ ++  + N+   +    Y  ++ +LC+  +  +A  LL ++   G  PD Y
Sbjct: 306 KSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 365

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY+ L+ GLC  G +++A E++ ++              L+ G       D +L +   M
Sbjct: 366 TYTILVDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFDKALSLLSKM 411

Query: 509 IEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            + G  PN  T+ IL+  +   D  + + E+L+E+  R
Sbjct: 412 EDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIAR 449



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 194/386 (50%), Gaps = 17/386 (4%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + +++KG + + V    L+  LCKA + + A++V+  +    + P+   Y+ ++  LCK 
Sbjct: 73  DDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKD 132

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             V  A  L  +M       + +TYN+L+ G  ++G L +++   ++++ K + P+ +T+
Sbjct: 133 KLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTF 192

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L++   KE  +  A  +L  +I +   P++++YN L+ G     +  +A   F  +  
Sbjct: 193 NILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMAR 252

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G  P+V SY++++  LC     +EA  LL EM     +P  VTY+ LI  L   G+   
Sbjct: 253 RGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFD 312

Query: 327 ALKVLDEMVKGRFRPS-AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           A  +++EM   R +P+   +YN ++  LC   +VD  +  L ++  +  +P+  TY  L 
Sbjct: 313 AWDLVNEM-HNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILV 371

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  G++++A  + Q L  K          Y + SL  K     A  LL +M   G T
Sbjct: 372 DGLCKNGRLKDAQEVYQILLIK---------GYHLDSLFDK-----ALSLLSKMEDNGCT 417

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIF 470
           P+  T+  LIR L    + ++A+E+ 
Sbjct: 418 PNPVTFEILIRALFENDMNDKAVELL 443



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 21/319 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D  + DAF    +M+ K   PDV+    L+Y      ++K+A+ +   M+   I PD  
Sbjct: 131 KDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIY 190

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  LV+ LCK+G +  A  ++  M       + +TYNSL+ G  ++   N++    + +
Sbjct: 191 TFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTM 250

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ P+  +YS ++    K + V  A+ LL ++ +K   PN V+Y+ L+ GL K GR 
Sbjct: 251 ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRI 310

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A     ++ ++G   +V++YN LL +LC   + ++A  LL ++      P I TY IL
Sbjct: 311 FDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTIL 370

Query: 315 IGSLAYHGKT---------------------DHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +  L  +G+                      D AL +L +M      P+  ++  +I  L
Sbjct: 371 VDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRAL 430

Query: 354 CSEGKVDLVVKCLDQMFHR 372
                 D  V+ L +M  R
Sbjct: 431 FENDMNDKAVELLREMIAR 449



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 14/163 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D  H+  ++ DA+  +  M ++G   DV+   +LL  LCK +++ KAI ++  +   GI 
Sbjct: 302 DGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQ 361

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT LV+ LCK G +  A ++ + +   GY  +++               +++L  
Sbjct: 362 PDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSL--------------FDKALSL 407

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L ++   G  PN  T+  L+ A ++      A++LL ++IA+G
Sbjct: 408 LSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARG 450


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 215/483 (44%), Gaps = 41/483 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ DA    + M+  G + ++     ++   CK  +M +  K+++     G+  D  SY 
Sbjct: 285 RMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYN 344

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV+  C+KG +  A +  + M   G+   T+TYN+L+ G C  G ++ +L+    ++++
Sbjct: 345 TLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKR 404

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+VPN  + S LL+  +K      A+ L  + +A+G   N+V+ N ++ GLCK  R  EA
Sbjct: 405 GVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEA 464

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +       + ++Y  L+   C  G    A ++  EM+     P++  +N  I  
Sbjct: 465 EELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITG 524

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    ++     +  EM      P+  +Y  +IA  C EG +        +M  +  KPN
Sbjct: 525 LFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPN 584

Query: 378 EGTYNGLAMLCGV--------GKVQEA--------------------------FAIIQSL 403
                    +C V        GKV EA                            II+SL
Sbjct: 585 -------LFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESL 637

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
               + S +  +  VI  LC+ G+   A  L  ++   GF PD++TYSSLI G    G I
Sbjct: 638 AGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSI 697

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           + A  +   M      P++  +N+L+ GLCKS     ++ +F  +  KG  PN  TY  L
Sbjct: 698 DLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTL 757

Query: 524 VEG 526
           ++G
Sbjct: 758 IDG 760



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 212/464 (45%), Gaps = 12/464 (2%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA    + M   G +  +     LL  L +A  +  A+ V + M  +G +PD  +  
Sbjct: 109 QLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVA 168

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +    C+ G V +A   +++ME+ G   N V Y++++ G C +G    + + L  L  K
Sbjct: 169 IMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVK 228

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN------LVSYNVLLTGLCKE 251
           GL PN  TY+ L++   KE  +  A K++ +I     K N       V+Y  L+ G C+ 
Sbjct: 229 GLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEI-----KENEKIVIDEVAYGALINGYCQR 283

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR E+A R   ++   G + N+  YN ++   C  GR  E  +LL   +    +    +Y
Sbjct: 284 GRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSY 343

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N L+      G    A +  D MV+  F  +  +YN ++   CS G +D  +K    M  
Sbjct: 344 NTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLK 403

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R   PNE + + L       GK ++A  + +    +  +        VI  LC+  +  +
Sbjct: 404 RGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTE 463

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L + M ++    DS TY +LI G C  G +  A +I + ME   + P V+ FN+ + 
Sbjct: 464 AEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFIT 523

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           GL  ++++    ++   M  KG  PN  TY  L+ G   +  L 
Sbjct: 524 GLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLH 567



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 222/469 (47%), Gaps = 29/469 (6%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA      M+ +G  P+ +  + LL    KA K ++A+ + +  ++ G+  +  +   
Sbjct: 391 IDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINT 450

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++N LCK   +  A +L  +M+++  P +++TY +L+ G C LG+L ++ Q    +   G
Sbjct: 451 VINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLG 510

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
            VP+   ++  +   +  +       +  ++ AKG  PN V+Y  L+ G CKEG   +A 
Sbjct: 511 FVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDAC 570

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN---ELLAEMD--------------- 300
             + ++  KG +PN+   ++L+     EG+ +EAN   + LA+ D               
Sbjct: 571 ILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKV 630

Query: 301 --------GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIA 351
                   GG+     + +NI+I  L   G+   A  + +++ VKG F P   +Y+ +I 
Sbjct: 631 AHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKG-FIPDNFTYSSLIH 689

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
              + G +DL     D+M   R  PN  TYN L   LC    V  A ++   L +K  S 
Sbjct: 690 GCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISP 749

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C+ G T +AF+L  +M K G  P  +TY+ LI GLC +G +EEA+++ 
Sbjct: 750 NAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLL 809

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
             M E +  P+   +  L+ G  +        +++  M   G +P   T
Sbjct: 810 DQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 218/482 (45%), Gaps = 20/482 (4%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM-----VSSGIIPD--- 132
           DA L L R+     +P ++    LL+ L  A +   A  ++  +     V+  + PD   
Sbjct: 28  DAALHLFRLAP--CRPSLLAHAQLLHILAHARRFPAARALLASLLSAHSVAPTLFPDLVE 85

Query: 133 --------ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
                   A+S+  L+      G +  A+ + ++M   G      + N L+  L   G++
Sbjct: 86  VYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDI 145

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
             ++    ++   G +P+ FT + + +A  ++  V  A   L ++   G   NLV+Y+ +
Sbjct: 146 GTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAV 205

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + G C+ G+TE A +    L  KG  PNVV+Y +L++  C EGR EEA +++ E+   ++
Sbjct: 206 MDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEK 265

Query: 305 SPTI-VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
                V Y  LI      G+ + A +V DEM+    + +   YN +I   C  G++  V 
Sbjct: 266 IVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVE 325

Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
           K L    +R    +E +YN L    C  G + +AF     +     +     Y  ++   
Sbjct: 326 KLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGF 385

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C +G    A +L + M K G  P+  + S+L+ G    G  E+AL ++          +V
Sbjct: 386 CSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNV 445

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
              N ++ GLCK+RR   + E+F  M E     +  TY  L++G     +L  + ++  E
Sbjct: 446 VTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIE 505

Query: 543 LQ 544
           ++
Sbjct: 506 ME 507



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 147/295 (49%), Gaps = 9/295 (3%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L+DA +    MV KG KP++   + L+    +  K+ +A  V++ +  + +I D S
Sbjct: 562 KEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCS 621

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + T          N+G    ++E +    + +  + +N ++ GLC LG +  +    + L
Sbjct: 622 ASTL---------NIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDL 672

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG +P+ FTYS L+        +  A  L D++++    PN+V+YN L+ GLCK    
Sbjct: 673 KVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNV 732

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+  F  L SKG  PN ++YN L+   C +G   EA +L  +M      PT+ TY IL
Sbjct: 733 SRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTIL 792

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           I  L   G  + A+K+LD+M++    P+  +Y  +I      G +  + K  ++M
Sbjct: 793 IHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 181/436 (41%), Gaps = 66/436 (15%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K   A    +  +++G   +VV    ++  LCK  +M +A ++   M       D+ +Y 
Sbjct: 425 KTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYR 484

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGY-PT------------------------------ 166
            L++  CK G++G A Q+  +ME+ G+ P+                              
Sbjct: 485 TLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAK 544

Query: 167 ----NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
               NTVTY +L+ G C  GNL+ +      +++KGL PN F  S L+   Y+E  V  A
Sbjct: 545 GLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA 604

Query: 223 ----MKLLD-DIIAKGGKPNL---------------------VSYNVLLTGLCKEGRTEE 256
                KL D D+I       L                     + +N+++ GLCK GR  +
Sbjct: 605 NLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVAD 664

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F DL  KGF P+  +Y+ L+      G  + A  L  EM     +P IVTYN LI 
Sbjct: 665 ARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIY 724

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L        A+ + +++      P+A +YN +I   C +G      K   +M     +P
Sbjct: 725 GLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQP 784

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQ 433
              TY  L   LC  G ++EA  ++  +   +N+    F  Y  +I    R G      +
Sbjct: 785 TVFTYTILIHGLCTQGYMEEAIKLLDQM--IENNVDPNFITYWTLIQGYARCGNMKAITK 842

Query: 434 LLYEMTKYGFTPDSYT 449
           L  EM   G  P ++T
Sbjct: 843 LYNEMHICGLLPANWT 858



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D    +AF   ++M+ +G +P V   T L++ LC    M++AIK+++ M+ + + 
Sbjct: 759 DGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVD 818

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTN 167
           P+  +Y  L+    + GN+    +L  +M   G  P N
Sbjct: 819 PNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPAN 856


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 239/501 (47%), Gaps = 44/501 (8%)

Query: 79  LNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK------------------ 119
           L++AF L LE  V      + V  T  L  LCK+ K+++A +                  
Sbjct: 285 LDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDM 344

Query: 120 VMEMMVSSG----------------IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           ++ +++ SG                I P + +   ++  LCK G V  A+ L+E M   G
Sbjct: 345 LIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 404

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK--GLVPNAFTYSFLLEAAYKERGVHA 221
           Y  +  T++ L+  LC    + ++ +FL  + +K      + F+Y+ LL +  K + VH 
Sbjct: 405 YCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQ 464

Query: 222 AMKLLDDIIA-KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A  +   +++ +   P++VSY++L+ G CK      A + ++ +      PNV +YN  L
Sbjct: 465 AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 524

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             L  +GR  +A  +  EM     SP ++TY+ LI   +   K D A ++ + M+    R
Sbjct: 525 NGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCR 584

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
           P+A +YN ++  LC E K D   +   +M  R C P+  TY  L    C VGK+++A  +
Sbjct: 585 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEV 644

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
              + +K +      Y  ++    R GK  +A QL   M      PD+ +++ +I GL  
Sbjct: 645 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSK 704

Query: 460 EGLIEEALEIFVVMEE-YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
              +++A+E+F  ME+ +   PD+  +N+L+ GLC  +R   +++VF+ +      P+  
Sbjct: 705 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPH 764

Query: 519 TYTILVE----GIAHQDELEL 535
            + +L+E    GI +Q E+  
Sbjct: 765 AFNVLLEAIKCGIVYQFEIRF 785



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 227/481 (47%), Gaps = 41/481 (8%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME-DY 162
           LL +    +K  +A K+   MV SG  PDA+ Y+Y+V   CK  N+  A +L  +M  + 
Sbjct: 240 LLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVES 299

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
             P N V + + + GLC  G + Q+ +   R +Q+ L  +   Y  L+    +   +  A
Sbjct: 300 KAPLNNVAWTAFLSGLCKSGKIEQAFEAC-RTMQESLSSSQPVYDMLIRLLIESGRIDKA 358

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
            +   +I  +  +P+  + + ++  LCK GR + A+     +  +G+ P++ ++++L+  
Sbjct: 359 EEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINE 418

Query: 283 LCMEGRWEEANELLAEMDG--GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-F 339
           LC   + +EA E L  MD     RS +  +YN L+ SL    K   A  +   MV  R F
Sbjct: 419 LCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSF 478

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFA 398
            P   SY+ +I   C   ++    K   QM    C PN  TYN  L  L   G++ +A  
Sbjct: 479 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQG 538

Query: 399 IIQ---------------------SLGNKQNSSPQEF--------------YKYVITSLC 423
           + +                     SL  K + + + F              Y  ++  LC
Sbjct: 539 VYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLC 598

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           ++ K  +A +L  +M + G  PD  TY++L+ G C  G IE+A+E+F  M    + PDV 
Sbjct: 599 KESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 658

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +N LL G  ++ +   + ++FQ+M+ +   P+  ++ I+++G++    L+ + EV + +
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718

Query: 544 Q 544
           +
Sbjct: 719 E 719



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 191/418 (45%), Gaps = 51/418 (12%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMK---------------------- 115
           +++ A   LE M+ +G+ PD+   + L+ +LCKA+K++                      
Sbjct: 389 RVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFS 448

Query: 116 ---------------KAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM 159
                          +A  +   MVS    +PD  SY+ L++  CK   +G A +L ++M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
            D     N  TYN+ + GL   G +  +    + ++  G  P+  TYS L+      R  
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             A +L + +I++G +PN V+YN LL GLCKE + +EA   FR +  +G +P+ V+Y  L
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           L   C  G+ E+A E+  EM      P +V YN L+      GK   A ++   MV  + 
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-CKPNEGTYNGLAM-LCGVGKVQEAF 397
           +P   S+N +I  L    ++D  V+  ++M     C P+  TYN L   LCG  ++ EA 
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ---------AFQLLYE-MTKYGFTP 445
            + + + ++   SP      V+    + G  YQ         AF +L E M   G  P
Sbjct: 749 KVFKEI-DRLKLSPDPHAFNVLLEAIKCGIVYQFEIRFKDPPAFNVLMEAMHAAGHKP 805



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 199/438 (45%), Gaps = 43/438 (9%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  +Y  L++ L +  ++  A Q+ EKM   G   N  TY  LV+  C   N +++++F 
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFF 187

Query: 192 DRLIQKGLVPNAFTY------------------------------------SFLLEAAYK 215
             ++ KG  P++  Y                                    + L+    +
Sbjct: 188 GEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQ 247

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP-NVV 274
           ++ + A+ KL   ++  G KP+   Y+ ++   CK    +EA + F ++  +   P N V
Sbjct: 248 DKAIEAS-KLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNV 306

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           ++   L  LC  G+ E+A E    M     S   V Y++LI  L   G+ D A +   E+
Sbjct: 307 AWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPV-YDMLIRLLIESGRIDKAEEACLEI 365

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKV 393
                +PS+ + + +I  LC  G+VD  +  L+ M  R   P+  T++ L   LC   K+
Sbjct: 366 AGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKI 425

Query: 394 QEAFAIIQSLGNK--QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM-TKYGFTPDSYTY 450
           QEA   +Q +  K    SS    Y  ++ SLC+  K +QAF +   M ++  F PD  +Y
Sbjct: 426 QEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSY 485

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           S LI G C    +  A +++  M + +  P+V  +NA L GL +  R   +  V++ M+ 
Sbjct: 486 SILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVA 545

Query: 511 KGQMPNETTYTILVEGIA 528
            G  P+  TY+ L+ G +
Sbjct: 546 AGCSPDVITYSTLIHGFS 563



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 135/245 (55%), Gaps = 1/245 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++ DA    E MV+ G  PDV+  + L++    A K  +A ++ E M+S G  P+A 
Sbjct: 529 RKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAV 588

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++ LCK+     A +L  KM + G   + VTY +L+ G C +G + Q+++  D +
Sbjct: 589 TYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEM 648

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + KG  P+   Y+ LL+  ++      A +L   ++++  KP+ VS+N+++ GL K  R 
Sbjct: 649 VSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRL 708

Query: 255 EEAIRFFRDLP-SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           ++A+  F  +    G  P++V+YN L+  LC E R  EA ++  E+D    SP    +N+
Sbjct: 709 DDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNV 768

Query: 314 LIGSL 318
           L+ ++
Sbjct: 769 LLEAI 773


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 149/582 (25%), Positives = 251/582 (43%), Gaps = 107/582 (18%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDASSYTYL 139
           DA   LE +  KG  P+VV  T L+   CK  +M++A +V++ M  +G I+ D  +Y  +
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +N  C++G +  A ++  +M D G   N   YN+++ GLC LG + +  + L  +   G+
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKL----------------------------LDD--- 228
            P+ ++Y+ L++   +E  +  A ++                            +DD   
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 229 ----IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
               ++ +G  PN +S + LL GL K G+TE+A+  +++  ++G   NV+++N ++  LC
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM---------- 334
             GR  EA ELL  M      P  +TY  L       G+   A  ++++M          
Sbjct: 511 KIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVE 570

Query: 335 -----VKGRF--------------------RPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
                + G F                     P+  +Y  +IA  C EG +        +M
Sbjct: 571 MFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630

Query: 370 FHRRCKPNEGTYNGLAMLC--GVGKVQEAFAIIQSLGNKQ-------------------- 407
            +    PN    + L M C    GKV EA  ++Q L N                      
Sbjct: 631 VNNGMNPNVFICSAL-MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVD 689

Query: 408 ---NSSPQE---FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
              + +P      +  +I  LC+ G+   A  L   +    F PD++TYSSLI G    G
Sbjct: 690 TIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASG 749

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            I+EA  +  VM      P++  +N+L+ GLCKS +   ++ +F  +  KG  PN  TY 
Sbjct: 750 SIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYN 809

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQ-VVSESAVERLVMQYD 562
            L+      DE     +  +  +L+Q +V E  +E  +   D
Sbjct: 810 TLI------DEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLD 845



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/555 (24%), Positives = 244/555 (43%), Gaps = 78/555 (14%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA      M   G   ++     ++  LCK  +M++  KV++ M   G+ PD  SY 
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C++G++  A ++   M   G    T+TYN+L++G C L  ++ +L+    ++++
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR 458

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  + S LL+  +K      A+ L  + +A+G   N++++N ++ GLCK GR  EA
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 258 ------IRFFRDLPSK-----------------------------GFEPNVVSYNILLRS 282
                 ++  R  P                               GF P+V  +N  +  
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
             +  +W + N++ +EM     SP +VTY  LI      G    A  +  EMV     P+
Sbjct: 579 HFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638

Query: 343 AASYNPIIARLCSEGKVD-------------LVVKC------LDQMFHRRCKPNEGT--- 380
               + +++    EGKVD             ++  C      +D++ H      +G    
Sbjct: 639 VFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHS 698

Query: 381 ----YNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
               +N +   LC  G++ +A ++ +SL NK+       Y  +I      G   +AF L 
Sbjct: 699 ANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLR 758

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M   G TP+  TY+SLI GLC  G +  A+ +F  ++     P+   +N L+   CK 
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818

Query: 496 RRTDLSLEVFQMMIEKGQM----------------PNETTYTILVEGIAHQDELELSAEV 539
            +T  + ++ Q M+E+G M                PN  TY  L+ G      +E  +++
Sbjct: 819 GKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 878

Query: 540 LKELQLRQVVSESAV 554
             E+ +R ++  + +
Sbjct: 879 YDEMHIRGLLPTNWI 893



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 216/468 (46%), Gaps = 2/468 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L+ A    + M   G +P +     LL  L ++     A  V   M  +G++PD  +  
Sbjct: 163 QLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVA 222

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +    C+ G V  A++ VE+ME  G   N V Y++++   C +G    + + L+ L +K
Sbjct: 223 IMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRK 282

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEE 256
           GL PN  TY+ L++   K+  +  A +++ ++   G    + V+Y +++ G C+ GR ++
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A R   ++   G   N+  YN ++  LC  GR EE  ++L EM+     P   +YN LI 
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLID 402

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G    A ++   MV+     +  +YN ++   CS   +D  ++    M  R   P
Sbjct: 403 GYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAP 462

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           NE + + L   L   GK ++A  + +    +  +     +  VI  LC+ G+  +A +LL
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL 522

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M +    PDS TY +L  G C  G +  A  +   ME   + P V+ FN+ + G   +
Sbjct: 523 DRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIA 582

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           ++     ++   M  +G  PN  TY  L+ G   +  L  +  +  E+
Sbjct: 583 KQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 213/457 (46%), Gaps = 2/457 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD ++  A   +E M   G + ++V    ++   C     + A +++E +   G+ P+  
Sbjct: 230 RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVV 289

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +YT LV   CK G +  A ++V++M++ G    + V Y  ++ G C  G ++ + +  + 
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G+  N F Y+ ++    K   +    K+L ++   G +P+  SYN L+ G C+EG 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +A    R +   G     ++YN LL+  C     ++A  L   M     +P  ++ + 
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L   GKT+ AL +  E +      +  ++N +I  LC  G++    + LD+M   R
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           C P+  TY  L    C +G++  A  ++  + +   +   E +   IT      + ++  
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            +  EM+  G +P+  TY +LI G C EG + EA  ++  M      P+V   +AL+   
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCF 649

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
            K  + D +  V Q ++    +P  +  TI ++ I+H
Sbjct: 650 YKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 219/479 (45%), Gaps = 17/479 (3%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM-------------VSS 127
           DA L L R+     +P +V    LL+ L +A +   A  ++  +             V  
Sbjct: 85  DAALHLFRLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYR 142

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
                A S+  L+      G +  A+ + + M   G   +  + N L+  L   G+   +
Sbjct: 143 DFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMA 202

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                ++   G++P+ FT + + +A  ++  V  A++ ++++   G + NLV+Y+ ++  
Sbjct: 203 AMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDC 262

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSP 306
            C  G TE+A R    L  KG  PNVV+Y +L++  C +GR EEA  ++ EM + GD   
Sbjct: 263 YCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVV 322

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
             V Y ++I      G+ D A +V +EM       +   YN +I  LC  G+++ V K L
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 367 DQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            +M     +P++ +YN L    C  G +++AF + + +     ++    Y  ++   C  
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
                A +L + M K G  P+  + S+L+ GL   G  E+AL ++          +V  F
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           N ++ GLCK  R   + E+   M E    P+  TY  L +G     +L  +  ++ +++
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 148/332 (44%), Gaps = 48/332 (14%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           HK+ND       M ++G  P++V    L+   CK   + +A  +   MV++G+ P+    
Sbjct: 586 HKVNDIH---SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFIC 642

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDY-------------------------GYP-TNTVT 170
           + L++C  K+G V  A  +++K+ +                          G P +  V 
Sbjct: 643 SALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVM 702

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           +N ++ GLC  G +  +    + L  K  +P+ FTYS L+        +  A  L D ++
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           + G  PN+++YN L+ GLCK G+   A+  F  L SKG  PN ++YN L+   C EG+  
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           EA +L  +M                      G  + A+K+LD+M++    P+  +Y  +I
Sbjct: 823 EAFKLKQKM-------------------VEEGYMEEAIKLLDQMIENNVDPNYITYCTLI 863

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
                 G ++ + K  D+M  R   P     N
Sbjct: 864 HGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 895


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 225/453 (49%), Gaps = 2/453 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K N+A+  LER   KG  P V+    +L  L +  K+++A++++E M      P+ +SY 
Sbjct: 357 KFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA-PNLTSYN 415

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G +  A+++ + M++ G   N +T N ++  LC    L+++      L  K
Sbjct: 416 ILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHK 475

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P++ T+  L++   +   V+ A  L + ++  G  PN V Y  L+    K GR E+ 
Sbjct: 476 VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDG 535

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + ++++  +G  P+++  N  +  +   G  E+   L  E+     +P + +Y+ILI  
Sbjct: 536 HKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G +    K+  EM +        +YN +I   C  GKV+   + L++M  +  +P 
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  L  + ++ EA+ + +   +K        Y  +I    + G+  +A+ +L 
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILE 715

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+ + G TP++YT++ L+  L     I+EAL  F  M+     P+   ++ ++ GLCK R
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVR 775

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           + + +   +Q M ++G  PN  TYT ++ G+A 
Sbjct: 776 KFNKAFVFWQEMQKQGLKPNTITYTTMISGLAR 808



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 219/465 (47%), Gaps = 4/465 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           + M   G  P+++    ++  LCKA ++ +A  +   +      PD+ ++  L++ L + 
Sbjct: 435 DSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRH 494

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G V  A  L EKM D G   N V Y SL+R     G      +    ++ +G  P+    
Sbjct: 495 GKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLL 554

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           +  ++  +K   +     L ++I A+G  P++ SY++L+ GL K G +++  + F ++  
Sbjct: 555 NNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKE 614

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +G   +  +YNI++   C  G+  +A +LL EM      PT+VTY  +I  LA   + D 
Sbjct: 615 QGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDE 674

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A  + +E        +   Y+ +I      G++D     L+++  +   PN  T+N L  
Sbjct: 675 AYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLD 734

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            L    ++ EA    Q++ N +    +  Y  ++  LC+  K  +AF    EM K G  P
Sbjct: 735 ALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKP 794

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           ++ TY+++I GL   G + EA ++F   +     PD   +NA++ GL  + +   +  +F
Sbjct: 795 NTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILF 854

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSA---EVLKELQLRQ 547
           +    KG      T  +L++ +   D LE +A    VL+E+   Q
Sbjct: 855 EETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQ 899



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 233/512 (45%), Gaps = 41/512 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  KL +AF  +E M     +P     T L+  L  A++    + ++  M   G      
Sbjct: 179 KSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVH 238

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +T L+    ++G V  A+ L+++M+   +  + V YN  +     +G ++ + +F   L
Sbjct: 239 LFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHEL 298

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +GLVP+  T++ ++    K   V  A++L +++ +    P + +YN ++ G    G+ 
Sbjct: 299 KSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKF 358

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA         KG  P+V++YN +L  L  +G+ EEA  +L  M   D +P + +YNIL
Sbjct: 359 NEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNIL 417

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L   G+ + ALKV D M +    P+  + N +I RLC   ++D        + H+ C
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVC 477

Query: 375 KPNEGTYNGLAMLCGV-GKVQEAFAIIQSL----------------------GNKQNSSP 411
            P+  T+  L    G  GKV +A+ + + +                      G K++   
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDG-- 535

Query: 412 QEFYKYVITSLC---------------RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
            + YK ++   C               + G+  +   L  E+   G TPD  +YS LI G
Sbjct: 536 HKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           L   G  ++  ++F  M+E     D   +N ++ G CKS + + + ++ + M  KG  P 
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             TY  +++G+A  D L+ +  + +E + + V
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAV 687



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 211/481 (43%), Gaps = 39/481 (8%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F  +ER   + H P+   A  LL  + +   ++   +++E M  +G  P  ++   +V  
Sbjct: 119 FRWVERKTKQLHSPEAYNA--LLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVAS 176

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K   +  A  ++E M  + +      Y +L+  L      +  L  L ++ + G    
Sbjct: 177 FVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVT 236

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              ++ L+    +E  V AA+ LLD++ +     +LV YNV +    K G+ + A +FF 
Sbjct: 237 VHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFH 296

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS----------------- 305
           +L S+G  P+ V++  ++  LC   R +EA EL  E+D                      
Sbjct: 297 ELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVG 356

Query: 306 ------------------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
                             P+++ YN ++  L   GK + AL++L+ M K    P+  SYN
Sbjct: 357 KFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYN 415

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNK 406
            +I  LC  G+++  +K  D M      PN  T N  +  LC   ++ EA +I   L +K
Sbjct: 416 ILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHK 475

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
             +     +  +I  L R GK   A+ L  +M   G TP++  Y+SLIR     G  E+ 
Sbjct: 476 VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDG 535

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            +I+  M      PD+   N  +  + K+   +    +F+ +  +G  P+  +Y+IL+ G
Sbjct: 536 HKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595

Query: 527 I 527
           +
Sbjct: 596 L 596



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 184/406 (45%), Gaps = 1/406 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R  K+NDA++  E+M+  G  P+ V  T+L+ +  K  + +   K+ + M+  G  
Sbjct: 489 DGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCS 548

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD       ++C+ K G +     L E+++  G   +  +Y+ L+ GL   G    + + 
Sbjct: 549 PDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKL 608

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + ++GL  +   Y+ +++   K   V+ A +LL+++  KG +P +V+Y  ++ GL K
Sbjct: 609 FYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAK 668

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R +EA   F +  SK  + NVV Y+ L+      GR +EA  +L E+     +P   T
Sbjct: 669 IDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYT 728

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           +N L+ +L    + D AL     M   +  P+  +Y+ ++  LC   K +       +M 
Sbjct: 729 WNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQ 788

Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +  KPN  TY  + + L  VG V EA  + +   +         Y  +I  L    K  
Sbjct: 789 KQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAM 848

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
            A+ L  E    G    S T   L+  L     +E+A  +  V+ E
Sbjct: 849 DAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLRE 894



 Score = 42.0 bits (97), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 27/134 (20%), Positives = 58/134 (43%)

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++ S  +  K  +AF ++  M K+ F P    Y++LI  L      +  L +   M+E  
Sbjct: 173 MVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG 232

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           Y+  V  F  L+    +  R D +L +   M       +   Y + ++      +++++ 
Sbjct: 233 YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAW 292

Query: 538 EVLKELQLRQVVSE 551
           +   EL+ + +V +
Sbjct: 293 KFFHELKSQGLVPD 306


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 226/470 (48%), Gaps = 12/470 (2%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P       LL+   K  K     +  + M+ +G  P   +Y  +++C+ K+G++  A  L
Sbjct: 96  PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGL 155

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            E+M+  G   +TVTYNS++ G   +G L+ ++ F + +      P+  TY+ L+    K
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +   ++   ++   G KPN+VSY+ L+   CKE   ++AI+F+ D+   G  PN  +
Sbjct: 216 SGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFT 275

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+ + C  G   +A  L  EM        +VTY  LI  L    +   A K+  +MV
Sbjct: 276 YTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMV 335

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN---EGTYNGLAMLCGVGK 392
                P+ ASYN +I        +D  ++ L+++  R  +P+    GT+  +  LCG+ K
Sbjct: 336 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTF--IWGLCGLEK 393

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++ A  ++  +      +    Y  ++ +  + G   +   LL EM +        T+  
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCV 453

Query: 453 LIRGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           LI GLC   L+ +A++ F  M  ++  +P+   + A++ GLCK  +   +  +F+ M ++
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQE 513

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           G +P+ T YT L++G   Q        +L+ L LR  ++E  ++  ++ Y
Sbjct: 514 GLVPDRTAYTSLMDGNLKQ------GNMLEALALRDKMAEIGMKLDLLAY 557



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 198/434 (45%), Gaps = 2/434 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E M  +G  PD V   +++    K  ++   +   E M S    PD  +Y  L+NC CK
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +   ++   +M+  G   N V+Y++LV   C    + Q+++F   + + G VPN FT
Sbjct: 216 SGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFT 275

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++A  K   +  A +L ++++  G + N+V+Y  L+ GLC   R +EA + F  + 
Sbjct: 276 YTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMV 335

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G  PN+ SYN L+         + A ELL E+ G    P ++ Y   I  L    K +
Sbjct: 336 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIE 395

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  V++EM +   + +   Y  ++      G     +  L++M     +    T+  L 
Sbjct: 396 AAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLI 455

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
             LC    V +A      + N     P    Y  +I  LC++ +   A  L  +M + G 
Sbjct: 456 DGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD   Y+SL+ G   +G + EAL +   M E   K D+  + +L+ G  +  +   +  
Sbjct: 516 VPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARS 575

Query: 504 VFQMMIEKGQMPNE 517
             + MI +  +P+E
Sbjct: 576 FLEEMIGEEILPDE 589



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 201/462 (43%), Gaps = 43/462 (9%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P    +  L + L   G +  A Q   KM+ +     T + N L+     LG  +   +
Sbjct: 60  VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
           F   +I  G  P  FTY+ +++  +KE  + AA  L +++  +G  P+ V+YN ++ G  
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K GR ++ + FF ++ S   EP+V++YN L+   C  G+  +  E   EM      P +V
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +Y+ L+ +         A+K   +M +    P+  +Y  ++   C  G +    +  ++M
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
                + N  TY  L   LC   +++EA   F  + + G   N +    Y  +I    + 
Sbjct: 300 LEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLAS---YNALIHGFVKA 356

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE--------------------- 464
               +A +LL E+   G  PD   Y + I GLC    IE                     
Sbjct: 357 KNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIY 416

Query: 465 --------------EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF-QMMI 509
                         E L +   M+E D++  V  F  L+ GLCK++    +++ F +M  
Sbjct: 417 TTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSN 476

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           + G  PN   YT +++G+  +++++ +  + +++    +V +
Sbjct: 477 DFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPD 518



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 133/299 (44%), Gaps = 36/299 (12%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DAF     M+  G + +VV  T L+  LC A +MK+A K+   MV++G+IP+ +SY  
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++   K  N+  A++L+ +++  G   + + Y + + GLC L  +  +   ++ + + G
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDD------------------------IIAK-- 232
           +  N   Y+ L++A +K       + LL++                        +++K  
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAI 468

Query: 233 ----------GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
                     G +PN   Y  ++ GLCKE + + A   F  +  +G  P+  +Y  L+  
Sbjct: 469 DYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDG 528

Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
              +G   EA  L  +M        ++ Y  L+   +   +   A   L+EM+     P
Sbjct: 529 NLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILP 587



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/370 (20%), Positives = 139/370 (37%), Gaps = 89/370 (24%)

Query: 268 GFEPNVVSYNIL--------------------------------------LRSLCME--- 286
           GF   + SY I+                                       R++C+    
Sbjct: 5   GFNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFG 64

Query: 287 ------------GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
                       G  EEA +  ++M      P   + N L+   A  GKTD   +   +M
Sbjct: 65  VFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKV 393
           +    +P+  +YN +I  +  EG ++      ++M  R   P+  TYN +    G VG++
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            +     + + +         Y  +I   C+ GK  +  +   EM + G  P+  +YS+L
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244

Query: 454 IRGLCMEGLIEEALEIFVVME-------EYDYKPDVD----------------------- 483
           +   C E ++++A++ +V M        E+ Y   VD                       
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304

Query: 484 -----NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
                 + AL+ GLC + R   + ++F  M+  G +PN  +Y  L+ G      ++ + E
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364

Query: 539 VLKELQLRQV 548
           +L EL+ R +
Sbjct: 365 LLNELKGRGI 374



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 9/178 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLC 144
           LE M    H+  VV    L+  LCK   + KAI     M +  G+ P+A+ YT +++ LC
Sbjct: 436 LEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLC 495

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K+  V  A  L E+M   G   +   Y SL+ G    GN+ ++L   D++ + G+  +  
Sbjct: 496 KENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLL 555

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE----GRTEEAI 258
            Y+ L+    +   +  A   L+++I +   P+     VL  G+ K+    G  +EA+
Sbjct: 556 AYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD----EVLCIGVLKKHYELGCIDEAV 609



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 53/110 (48%)

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P    + +L   L   G++EEA + F  M+ +   P   + N LL    K  +TD     
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           F+ MI  G  P   TY I+++ +  + ++E +  + +E++ R ++ ++  
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVT 170


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 225/479 (46%), Gaps = 9/479 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + ++A+  L  M ++G KPDV+  T L+  LC A ++  A  V   M  S   PD  +Y 
Sbjct: 324 RFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI 383

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++     G     M++   M+  GY  N V Y +++  LC +G + ++L+  D + QK
Sbjct: 384 TLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK 443

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+VP  ++Y+ L+    K      A++L   +   G KPN  ++ + +    K G + +A
Sbjct: 444 GIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKA 503

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I+ +  + SKG  P+VV+ N +L  L   GR   A  +  E+     SP  +TY ++I  
Sbjct: 504 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKC 563

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +   K D A+K+  +M++    P     N +I  L   G+ D   +   Q+     +P 
Sbjct: 564 CSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPT 623

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
           +GTYN  LA L   GKV+E   +++ + +         Y  ++  LC+ G    A  +LY
Sbjct: 624 DGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLY 683

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            MT  G  PD  +Y+++I GL  E    EA  IF  M++    PD      +L    K  
Sbjct: 684 SMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIG 742

Query: 497 RTDLSLEVF-QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
               +L +  +  ++ G   + ++   L+EGI  +   E      K ++  ++++ S +
Sbjct: 743 LMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTE------KSIEFAEIIASSGI 795



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 231/501 (46%), Gaps = 46/501 (9%)

Query: 86  LERMVSKGHKPDVVQAT-------NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           LER  S   +P VV  T       +L+ D  +   M +   VM+  +   +  +  ++  
Sbjct: 153 LERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQI---VKANVGTFAA 209

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +   L  +G +  A   +  M++ G   N  TYN LV  L   G   ++L+    ++  G
Sbjct: 210 IFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDG 269

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           +VP+  TYS L+ A  K R V   + LL ++ A G KPN+ SY + +  L +  R +EA 
Sbjct: 270 VVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAY 329

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           R   ++ ++G +P+V+++ +L++ LC  GR  +A ++  +M   D+ P  VTY  L+   
Sbjct: 330 RILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKF 389

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
           A +G++   +++ + M    +  +  +Y  +I  LC  G+V   ++  D+M  +   P +
Sbjct: 390 ADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQ 449

Query: 379 GTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNS---------------SPQEFYKY-- 417
            +YN    G       G   E F  +   G K N                S +   +Y  
Sbjct: 450 YSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYEL 509

Query: 418 ---------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
                          V+  L + G+   A ++ +E+   G +PD+ TY+ +I+       
Sbjct: 510 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASK 569

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            +EA++IF  M E +  PDV   N+L+  L K+ R D + ++F  + E    P + TY  
Sbjct: 570 FDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNT 629

Query: 523 LVEGIAHQDELELSAEVLKEL 543
           L+ G+  + +++    +L+E+
Sbjct: 630 LLAGLGREGKVKEVMHLLEEM 650



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 229/541 (42%), Gaps = 80/541 (14%)

Query: 83   FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            F +L+ M   G  PD +  T ++    KA+K  +A+K+   M+ +  +PD      L++ 
Sbjct: 542  FHELKAM---GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDT 598

Query: 143  LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            L K G    A Q+  ++++        TYN+L+ GL   G + + +  L+ +      PN
Sbjct: 599  LYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPN 658

Query: 203  AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              TY+ +L+   K   V+ A+ +L  +  KG  P+L SYN ++ GL KE R  EA   F 
Sbjct: 659  LITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFC 718

Query: 263  DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE--MDGGDRSPTIVTYNILIGSLAY 320
             +  K   P+  +   +L S    G  +EA  ++ E  +  G ++     ++++ G L  
Sbjct: 719  QM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKK 777

Query: 321  HG-------------------------------KTDHALKVLDEMVKGRFRP-----SAA 344
             G                               K   AL+   E+VK +F+         
Sbjct: 778  AGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA-HELVK-KFKSFGVSLKTG 835

Query: 345  SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVG-KVQEAFAIIQSL 403
            SYN +I  L  E  +D+      +M    C P+E TYN L    G   +++E   + + +
Sbjct: 836  SYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 895

Query: 404  GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
              K   S    Y  +I+ L +  +  QA  L Y +   GF+P   TY  L+ GL   G I
Sbjct: 896  HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 955

Query: 464  EEALEIFVVMEEYDYK-----------------------------------PDVDNFNAL 488
            E+A  +F  M EY  K                                   PD+ ++  +
Sbjct: 956  EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 1015

Query: 489  LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            +  LCK+ + +  L  F+ ++E G  P+  TY +L++G+     LE +  +  E+Q + +
Sbjct: 1016 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1075

Query: 549  V 549
            V
Sbjct: 1076 V 1076



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 215/460 (46%), Gaps = 7/460 (1%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++  +NDA   L  M +KG  PD+     ++Y L K  +  +A  +   M    +I
Sbjct: 667  DCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLI 725

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD ++   ++    K G +  A+ ++ E     G  T+  + +SL+ G+       +S++
Sbjct: 726  PDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIE 785

Query: 190  FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            F + +   G+  + F    L++   K++    A +L+    + G      SYN L+ GL 
Sbjct: 786  FAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLV 845

Query: 250  KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
             E   + A   F ++   G  P+  +YN+LL ++    R EE  ++  EM       T V
Sbjct: 846  DENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYV 905

Query: 310  TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            TYN +I  L    + + A+ +   ++   F P+  +Y P++  L   G+++      ++M
Sbjct: 906  TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 965

Query: 370  FHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
                CK N   YN   +L G    G  ++   + Q + ++  +   + Y  +I +LC+ G
Sbjct: 966  LEYGCKANCTIYN--ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAG 1023

Query: 427  KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
            +         ++ + G  PD  TY+ LI GL     +EEA+ +F  M++    P++  +N
Sbjct: 1024 QLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYN 1083

Query: 487  ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            +L+L L K+ +   + ++++ ++ KG  PN  TY  L+ G
Sbjct: 1084 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1123



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/493 (22%), Positives = 223/493 (45%), Gaps = 44/493 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  A + L  M   G   +      L+Y L K+   ++A++V ++M+  G++P   +Y+ 
Sbjct: 220 LRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSV 279

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+    K+ +V   + L+ +ME +G   N  +Y   +R L      +++ + L  +  +G
Sbjct: 280 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEG 339

Query: 199 LVPNAFTYSFLLEA----------------------------------AYKERG-VHAAM 223
             P+  T++ L++                                    + + G   + M
Sbjct: 340 CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVM 399

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           ++ + + A G   N+V+Y  ++  LC+ GR  EA+  F ++  KG  P   SYN L+   
Sbjct: 400 EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGF 459

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD--EMVKGR-FR 340
               R+ +A EL   MD     P   T+ + I    Y+GK+  ++K +   E++K +   
Sbjct: 460 LKADRFGDALELFKYMDIHGPKPNGYTHVLFIN---YYGKSGESIKAIQRYELMKSKGIV 516

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAI 399
           P   + N ++  L   G++ +  +   ++      P+  TY  +   C    K  EA  I
Sbjct: 517 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 576

Query: 400 IQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
              +  + N  P       +I +L + G+  +A+Q+ Y++ +    P   TY++L+ GL 
Sbjct: 577 FYDM-IENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLG 635

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            EG ++E + +   M   +Y P++  +N +L  LCK+   + +L++   M  KG +P+ +
Sbjct: 636 REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 695

Query: 519 TYTILVEGIAHQD 531
           +Y  ++ G+  ++
Sbjct: 696 SYNTVIYGLVKEE 708



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 214/474 (45%), Gaps = 9/474 (1%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R+ K+ +    LE M    + P+++    +L  LCK   +  A+ ++  M + G IPD S
Sbjct: 636  REGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLS 695

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL-DR 193
            SY  ++  L K+     A  +  +M+    P +  T  +++     +G + ++L  + + 
Sbjct: 696  SYNTVIYGLVKEERYNEAFSIFCQMKKVLIP-DYATLCTILPSFVKIGLMKEALHIIKEY 754

Query: 194  LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
             +Q G   +  +   L+E   K+ G   +++  + I + G   +      L+  LCK+ +
Sbjct: 755  FLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKK 814

Query: 254  TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              EA    +   S G      SYN L+  L  E   + A  L AEM      P   TYN+
Sbjct: 815  ALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 874

Query: 314  LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
            L+ ++    + +  LKV +EM +  +  +  +YN II+ L    +++  +     +  + 
Sbjct: 875  LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 934

Query: 374  CKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              P   TY  L   L   G++++A   F  +   G K N +    Y  ++      G T 
Sbjct: 935  FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT---IYNILLNGHRIAGNTE 991

Query: 430  QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            +   L  +M   G  PD  +Y+ +I  LC  G + + L  F  + E   +PD+  +N L+
Sbjct: 992  KVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLI 1051

Query: 490  LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             GL KS+R + ++ +F  M +KG +PN  TY  L+  +    +   + ++ +EL
Sbjct: 1052 DGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1105



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 195/447 (43%), Gaps = 42/447 (9%)

Query: 77   HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            H + + FLQ       G K D     +L+  + K    +K+I+  E++ SSGI  D    
Sbjct: 749  HIIKEYFLQ------PGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFL 802

Query: 137  TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              L+  LCK+     A +LV+K + +G    T +YNSL+ GL                + 
Sbjct: 803  CPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGL----------------VD 846

Query: 197  KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            + L+  A              G+ A MK L      G  P+  +YN+LL  + K  R EE
Sbjct: 847  ENLIDIA-------------EGLFAEMKEL------GCGPDEFTYNLLLDAMGKSMRIEE 887

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
             ++   ++  KG+E   V+YN ++  L    R E+A +L   +     SPT  TY  L+ 
Sbjct: 888  MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLD 947

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             L   G+ + A  + +EM++   + +   YN ++      G  + V      M  +   P
Sbjct: 948  GLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP 1007

Query: 377  NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            +  +Y  +   LC  G++ +     + L           Y  +I  L +  +  +A  L 
Sbjct: 1008 DIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 1067

Query: 436  YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             EM K G  P+ YTY+SLI  L   G   EA +++  +    +KP+V  +NAL+ G   S
Sbjct: 1068 NEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVS 1127

Query: 496  RRTDLSLEVFQMMIEKGQMPNETTYTI 522
              TD +   +  MI  G +PN +T  I
Sbjct: 1128 GSTDSAYAAYGRMIVGGCLPNSSTCHI 1154



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 196/432 (45%), Gaps = 34/432 (7%)

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           ++   +S  Y+++ +   G VG   ++ + M+      N  T+ ++  GL + G L  + 
Sbjct: 165 VVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAP 224

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
             L  + + G+V NA+TY+ L+    K      A+++   ++  G  P++ +Y+VL+   
Sbjct: 225 VALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAF 284

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            K    E  +   R++ + G +PNV SY I +R L    R++EA  +LAEM+     P +
Sbjct: 285 GKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDV 344

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           +T+ +LI  L   G+   A  V  +M K   +P   +Y  ++ +    G+          
Sbjct: 345 ITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQ-------- 396

Query: 369 MFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                                   V E +  +++ G   N      Y  VI +LC+ G+ 
Sbjct: 397 -----------------------SVMEIWNAMKADGYNDNVVA---YTAVIDALCQVGRV 430

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
           ++A ++  EM + G  P+ Y+Y+SLI G        +ALE+F  M+ +  KP+       
Sbjct: 431 FEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLF 490

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +    KS  +  +++ +++M  KG +P+      ++ G+A    L ++  V  EL+   V
Sbjct: 491 INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGV 550

Query: 549 VSESAVERLVMQ 560
             ++    ++++
Sbjct: 551 SPDTITYTMMIK 562



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 155/344 (45%), Gaps = 9/344 (2%)

Query: 41   FIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQ 100
            F  ++AS+ +T+   D  +  P  K           H+L   F      +  G       
Sbjct: 786  FAEIIASSGITL---DDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTG------S 836

Query: 101  ATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
              +L+  L   N +  A  +   M   G  PD  +Y  L++ + K   +   +++ E+M 
Sbjct: 837  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 896

Query: 161  DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
              GY +  VTYN+++ GL     L Q++     L+ +G  P   TY  LL+   K   + 
Sbjct: 897  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 956

Query: 221  AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
             A  L ++++  G K N   YN+LL G    G TE+    F+D+  +G  P++ SY I++
Sbjct: 957  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 1016

Query: 281  RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             +LC  G+  +      ++      P ++TYN+LI  L    + + A+ + +EM K    
Sbjct: 1017 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1076

Query: 341  PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
            P+  +YN +I  L   GK     K  +++  +  KPN  TYN L
Sbjct: 1077 PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNAL 1120



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 136/275 (49%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  ++ +     E M  KG++   V    ++  L K+ ++++AI +   ++S G  
Sbjct: 877  DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 936

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L++ L K G +  A  L  +M +YG   N   YN L+ G  + GN  +    
Sbjct: 937  PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHL 996

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
               ++ +G+ P+  +Y+ +++   K   ++  +     ++  G +P+L++YN+L+ GL K
Sbjct: 997  FQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGK 1056

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              R EEA+  F ++  KG  PN+ +YN L+  L   G+  EA ++  E+      P + T
Sbjct: 1057 SKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFT 1116

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            YN LI   +  G TD A      M+ G   P++++
Sbjct: 1117 YNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 134/339 (39%), Gaps = 38/339 (11%)

Query: 217 RGVHAAMKLLDDIIAKGGKPNLV----SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
           R      + L+   +   +P +V    S N +L  +   GR  +    F  +  +  + N
Sbjct: 144 RSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKAN 203

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V ++  +   L +EG    A   L  M          TYN L+  L   G    AL+V  
Sbjct: 204 VGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYK 263

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
            M+     PS  +Y+ ++        V+ V+  L +M     KPN  +Y     +C    
Sbjct: 264 VMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT----IC---- 315

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
                  I+ LG  +                      +A+++L EM   G  PD  T++ 
Sbjct: 316 -------IRVLGQARRFD-------------------EAYRILAEMENEGCKPDVITHTV 349

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI+ LC  G I +A ++F  M++ D KPD   +  LL     +  +   +E++  M   G
Sbjct: 350 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
              N   YT +++ +     +  + E+  E++ + +V E
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPE 448


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 218/459 (47%), Gaps = 2/459 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           LE M + G +P++   T  +  L +A ++  A  +++ M   G  PD  +YT L++ LC 
Sbjct: 250 LEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCA 309

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +L  KM    +  + VTY +L+      G+L    +F   +   G  P+  T
Sbjct: 310 AGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVT 369

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+EA  K   V  A  +LD +  +G  PNL +YN L++GL    R +EA+  F ++ 
Sbjct: 370 YTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           S G  P   SY + +      G  E+A +   +M      P+I   N  + SLA  G+  
Sbjct: 430 SLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIR 489

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  + +++      P + +YN ++      G++D   K L +M    C+P+    N L 
Sbjct: 490 EAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLI 549

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             L   G+V EA+ +   L + + +     Y  +IT L ++GK  +A  L   M + G  
Sbjct: 550 DTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCP 609

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P++ T+++L+  LC    ++ AL++F  M   +  PDV  +N ++ GL K  R   +   
Sbjct: 610 PNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWF 669

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +  M +K   P+  T   L+ G+     +E + +++ E 
Sbjct: 670 YHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEF 707



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 225/468 (48%), Gaps = 1/468 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +  A   L +M   G   +      L+Y L +    K+A+KV + M+S G+ P   +Y+ 
Sbjct: 173 IRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSA 232

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L ++ + G  M L+E+ME  G   N  TY   +R L   G ++ +   L  +  +G
Sbjct: 233 LMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG 292

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY+ L++A      +  A +L   + A   KP+LV+Y  L++     G  E   
Sbjct: 293 CGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVK 352

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           RF+ ++ + G+ P+VV+Y IL+ +LC  G+ ++A ++L  M      P + TYN LI  L
Sbjct: 353 RFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGL 412

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
               + D AL++ + M      P+A SY   I      G  +  +   ++M  R   P+ 
Sbjct: 413 LNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSI 472

Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
              N  L  L  +G+++EA  I   + N   S     Y  ++    + G+  +A +LL E
Sbjct: 473 AACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTE 532

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD    +SLI  L   G ++EA ++F  +++    P V  +N L+ GL K  +
Sbjct: 533 MLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGK 592

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
              +L++F  M E G  PN  T+  L++ +   D ++L+ ++   + +
Sbjct: 593 LLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTI 640



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 192/399 (48%), Gaps = 6/399 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL+ A     +M +  HKPD+V    L+        ++   +    M + G  PD  +YT
Sbjct: 312 KLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYT 371

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            LV  LCK G V  A  +++ M   G   N  TYN+L+ GL  L  L+++L+  + +   
Sbjct: 372 ILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESL 431

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P A++Y   ++   K      A+   + +  +G  P++ + N  L  L + GR  EA
Sbjct: 432 GVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREA 491

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F D+ + G  P+ V+YN++++     G+ ++A +LL EM      P I+  N LI +
Sbjct: 492 KDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDT 551

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G+ D A ++   +   +  P+  +YN +I  L  EGK+   +     M    C PN
Sbjct: 552 LYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPN 611

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             T+N L   LC    V  A  +   +    N SP    Y  +I  L ++G+   AF   
Sbjct: 612 TVTFNALLDCLCKNDAVDLALKMFCRM-TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFY 670

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           ++M K+  +PD  T  +L+ G+  +G +E+A++I  VME
Sbjct: 671 HQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKI--VME 706



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 211/475 (44%), Gaps = 52/475 (10%)

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
           V ++M    I  + ++Y  +   L  KG +  A   + KM   G+  N  +YN L+  L 
Sbjct: 144 VFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLL 203

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
             G   ++L+   R+I +GL P+  TYS L+ A  + R     M LL+++   G +PN+ 
Sbjct: 204 QPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIY 263

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +Y + +  L + GR ++A    + +  +G  P+VV+Y +L+ +LC  G+ ++A EL  +M
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKM 323

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P +VTY  L+     +G  +   +   EM    + P   +Y  ++  LC  GKV
Sbjct: 324 RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKV 383

Query: 360 DLVVKCLDQMFHRRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           D     LD M  R   PN  TYN    GL  L  + +  E F  ++SLG    +     Y
Sbjct: 384 DQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTA-----Y 438

Query: 416 KYV-------------------------------------ITSLCRKGKTYQAFQLLYEM 438
            YV                                     + SL   G+  +A  +  ++
Sbjct: 439 SYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDI 498

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G +PDS TY+ +++     G I++A ++   M     +PD+   N+L+  L K+ R 
Sbjct: 499 HNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRV 558

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           D + ++F  + +    P   TY IL+ G+  + +L      LK L L   + ES 
Sbjct: 559 DEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKL------LKALDLFGSMKESG 607



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 222/491 (45%), Gaps = 39/491 (7%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  PD V    ++    KA ++ KA K++  M+S G  PD      L++ L K G V  A
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            Q+  +++D       VTYN L+ GL   G L ++L     + + G  PN  T++ LL+ 
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K   V  A+K+   +      P++++YN ++ GL KEGR   A  F+  +  K   P+
Sbjct: 622 LCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPD 680

Query: 273 VVSYNILLRSLCMEGRWEEA----------------NELLAEM-----------DGGDRS 305
            V+   LL  +  +GR E+A                N++  E+           +    +
Sbjct: 681 HVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFA 740

Query: 306 PTIVTYNI---------LIGSLAYHGKTDHALKVLDEMVKG-RFRPSAASYNPIIARLCS 355
             +V  +I         LI  L    K   A K+ D+  K     P+  SYN ++  L  
Sbjct: 741 EGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLG 800

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK-VQEAFAIIQSLGNKQNSSPQEF 414
               +  +K   +M +  C PN  TYN L    G  K + E F +   +  +        
Sbjct: 801 CNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIIT 860

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  +I++L +     +A  L YE+    F+P   TY  LI GL   G  EEA++IF  M 
Sbjct: 861 HNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP 920

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           +Y  KP+   +N L+ G  K+   +++ ++F+ MI++G  P+  +YTILVE +     ++
Sbjct: 921 DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVD 980

Query: 535 LSAEVLKELQL 545
            +    +EL+L
Sbjct: 981 DAVHYFEELKL 991



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 213/447 (47%), Gaps = 17/447 (3%)

Query: 85   QLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSYTYLVNCL 143
            Q+++ +S    PD V    LL  + K  +++ AIK VME +  SG+      +  L+ C+
Sbjct: 672  QMKKFLS----PDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECI 727

Query: 144  CKKGNVGYAMQLVEKMEDYGYPTNTVTYNS-----LVRGLCMLGNLNQSLQFLDRLIQK- 197
              +  +  A+   E     G   N++  +      L+R LC       + +  D+  +  
Sbjct: 728  LIEAEIEEAISFAE-----GLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSL 782

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            G  P   +Y+ L++         AA+KL  ++   G  PN+ +YN+LL    K  R +E 
Sbjct: 783  GTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDEL 842

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + ++  +G +PN++++NI++ +L       +A +L  E+  GD SPT  TY  LIG 
Sbjct: 843  FELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGG 902

Query: 318  LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            L   G+++ A+K+ +EM   + +P+ A YN +I      G V++      +M     +P+
Sbjct: 903  LLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPD 962

Query: 378  EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
              +Y  L   L   G+V +A    + L           Y  +I  L +  +  +A  L  
Sbjct: 963  LKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFS 1022

Query: 437  EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            EM   G +P+ YTY++LI      G++++A ++F  ++    +P+V  +NAL+ G  KS 
Sbjct: 1023 EMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSG 1082

Query: 497  RTDLSLEVFQMMIEKGQMPNETTYTIL 523
              D +  VF+ M+  G  PN  T+  L
Sbjct: 1083 NKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 220/509 (43%), Gaps = 39/509 (7%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            ++ KL  A      M   G  P+ V    LL  LCK + +  A+K+   M      PD  
Sbjct: 589  KEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVL 648

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +Y  ++  L K+G  GYA     +M+ +  P +   Y +L+ G+   G +  +++ +   
Sbjct: 649  TYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLY-TLLPGVVKDGRVEDAIKIVMEF 707

Query: 195  I-QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK--------------------- 232
            + Q GL  +   +  L+E    E  +  A+   + ++                       
Sbjct: 708  VHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKK 767

Query: 233  ---------------GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYN 277
                           G  P   SYN L+ GL     TE A++ F ++ + G  PN+ +YN
Sbjct: 768  ALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYN 827

Query: 278  ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            +LL +     R +E  EL  EM      P I+T+NI+I +L      + AL +  E++ G
Sbjct: 828  LLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISG 887

Query: 338  RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEA 396
             F P+  +Y P+I  L   G+ +  +K  ++M   +CKPN   YN L    G  G V  A
Sbjct: 888  DFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIA 947

Query: 397  FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
              + + +  +      + Y  ++  L   G+   A     E+   G  PD+ +Y+ +I G
Sbjct: 948  CDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMING 1007

Query: 457  LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            L     +EEAL +F  M+     P++  +NAL+L    +   D + ++F+ +   G  PN
Sbjct: 1008 LGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPN 1067

Query: 517  ETTYTILVEGIAHQDELELSAEVLKELQL 545
              TY  L+ G +     + +  V K++ +
Sbjct: 1068 VFTYNALIRGHSKSGNKDRAFSVFKKMMI 1096



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 223/485 (45%), Gaps = 6/485 (1%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            DT ++  ++++A+    R+      P VV    L+  L K  K+ KA+ +   M  SG  
Sbjct: 550  DTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCP 609

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  ++  L++CLCK   V  A+++  +M       + +TYN+++ GL   G    +  F
Sbjct: 610  PNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWF 669

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG--KPNLVSYNVLLTGL 248
              ++ +K L P+  T   LL    K+  V  A+K++ + + + G    N V +  L+  +
Sbjct: 670  YHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQV-WGELMECI 727

Query: 249  CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG-DRSPT 307
              E   EEAI F   L       +      L+R LC + +  +A +L  +        PT
Sbjct: 728  LIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPT 787

Query: 308  IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
              +YN L+  L     T+ ALK+  EM      P+  +YN ++       ++D + +  +
Sbjct: 788  PESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYN 847

Query: 368  QMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
            +M  R CKPN  T+N + + L     + +A  +   + +   S     Y  +I  L + G
Sbjct: 848  EMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAG 907

Query: 427  KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
            ++ +A ++  EM  Y   P+   Y+ LI G    G +  A ++F  M +   +PD+ ++ 
Sbjct: 908  RSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYT 967

Query: 487  ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             L+  L  + R D ++  F+ +   G  P+  +Y +++ G+     LE +  +  E++ R
Sbjct: 968  ILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNR 1027

Query: 547  QVVSE 551
             +  E
Sbjct: 1028 GISPE 1032



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 216/489 (44%), Gaps = 7/489 (1%)

Query: 78  KLND---AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           KL D   A    E+M  +G  P +      LY L +  ++++A  +   + + G+ PD+ 
Sbjct: 449 KLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSV 508

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++ C  K G +  A +L+ +M   G   + +  NSL+  L   G ++++ Q   RL
Sbjct: 509 TYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL 568

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               L P   TY+ L+    KE  +  A+ L   +   G  PN V++N LL  LCK    
Sbjct: 569 KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAV 628

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A++ F  +      P+V++YN ++  L  EGR   A     +M     SP  VT   L
Sbjct: 629 DLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTL 687

Query: 315 IGSLAYHGKTDHALKVLDEMV-KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF-HR 372
           +  +   G+ + A+K++ E V +   + S   +  ++  +  E +++  +   + +  + 
Sbjct: 688 LPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNS 747

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQA 431
            C+ +      + +LC   K  +A  +         + P  E Y  ++  L     T  A
Sbjct: 748 ICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAA 807

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L  EM   G  P+ +TY+ L+        I+E  E++  M     KP++   N ++  
Sbjct: 808 LKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISA 867

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           L KS   + +L+++  +I     P   TY  L+ G+      E + ++ +E+   Q    
Sbjct: 868 LVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPN 927

Query: 552 SAVERLVMQ 560
            A+  +++ 
Sbjct: 928 CAIYNILIN 936



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 139/276 (50%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  ++++ F     M+ +G KP+++    ++  L K+N + KA+ +   ++S    
Sbjct: 831  DAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFS 890

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L+  L K G    AM++ E+M DY    N   YN L+ G    GN+N +   
Sbjct: 891  PTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDL 950

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              R+I++G+ P+  +Y+ L+E  +    V  A+   +++   G  P+ VSYN+++ GL K
Sbjct: 951  FKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGK 1010

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              R EEA+  F ++ ++G  P + +YN L+      G  ++A ++  E+      P + T
Sbjct: 1011 SRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFT 1070

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            YN LI   +  G  D A  V  +M+     P+A ++
Sbjct: 1071 YNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 138/300 (46%)

Query: 89   MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
            M + G  P++     LL    K+ ++ +  ++   M+  G  P+  ++  +++ L K  +
Sbjct: 814  MKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNS 873

Query: 149  VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
            +  A+ L  ++    +     TY  L+ GL   G   ++++  + +      PN   Y+ 
Sbjct: 874  INKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNI 933

Query: 209  LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
            L+    K   V+ A  L   +I +G +P+L SY +L+  L   GR ++A+ +F +L   G
Sbjct: 934  LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993

Query: 269  FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             +P+ VSYN+++  L    R EEA  L +EM     SP + TYN LI      G  D A 
Sbjct: 994  LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053

Query: 329  KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            K+ +E+      P+  +YN +I      G  D       +M    C PN GT+  L   C
Sbjct: 1054 KMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNKC 1113



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 165/373 (44%), Gaps = 43/373 (11%)

Query: 186 QSLQFLDRLIQKGLVP-NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           + + F+  L+QK ++  N  TY  + +A   + G+  A   L  +   G   N  SYN L
Sbjct: 139 EDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGL 198

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN---ELLAEMDG 301
           +  L + G  +EA++ ++ + S+G +P++ +Y+ L+ +L   GR  +     +LL EM+ 
Sbjct: 199 IYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVAL---GRRRDTGTIMDLLEEMET 255

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P I TY I I  L   G+ D A  +L  M      P   +Y  +I  LC+ GK+D 
Sbjct: 256 LGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDK 315

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN-SSPQEFYKYVIT 420
             +   +M     KP+  TY                 ++   GN  +  + + F+     
Sbjct: 316 AKELYTKMRASSHKPDLVTY---------------ITLMSKFGNYGDLETVKRFWS---- 356

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
                           EM   G+ PD  TY+ L+  LC  G +++A ++  VM      P
Sbjct: 357 ----------------EMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVP 400

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           ++  +N L+ GL   RR D +LE+F  M   G  P   +Y + ++      + E + +  
Sbjct: 401 NLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTF 460

Query: 541 KELQLRQVVSESA 553
           ++++ R ++   A
Sbjct: 461 EKMKKRGIMPSIA 473



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 68/132 (51%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            +++DA    E +   G  PD V    ++  L K+ ++++A+ +   M + GI P+  +Y 
Sbjct: 978  RVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYN 1037

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+      G V  A ++ E+++  G   N  TYN+L+RG    GN +++     +++  
Sbjct: 1038 ALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIV 1097

Query: 198  GLVPNAFTYSFL 209
            G  PNA T++ L
Sbjct: 1098 GCSPNAGTFAQL 1109


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 222/466 (47%), Gaps = 36/466 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
             H  + A   L  M+ +GH P      NLL  L ++N   KA  +  ++  S ++ +A 
Sbjct: 101 HSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL-KSKVVLNAY 159

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+  ++   C+ G      +L+  +E++G   N V Y +L+ G C  G++  +     ++
Sbjct: 160 SFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKM 219

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GLVPN  TYS L+   +K+       ++ +++   G  PN  +YN L++  C +G  
Sbjct: 220 DRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMV 279

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A + F ++  KG    V++YNIL+  LC   ++ EA +L+ +++    SP IVTYNIL
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK D A+++ +++      P+  +YN +IA      KV+ +   LD       
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIA---GYSKVENLAGALD------- 389

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                                   +++ +  +  +  +  Y  +I +  R   T +A ++
Sbjct: 390 ------------------------LVKEMEERCIARSKVTYTILIDAFARLNYTDKACEM 425

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
              M K G  PD YTYS LI G C+ G ++EA + F  + E   +P+   +N ++ G CK
Sbjct: 426 HSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
              +  +L +   M+  G +PN  ++   + G+  +DE    AE+L
Sbjct: 486 EGSSYRALRLLNEMVHSGMVPNVASFCSTM-GLLCRDEKWKEAELL 530



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 168/391 (42%), Gaps = 34/391 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P+VV  T L+   CK   +  A  +   M   G++P+  +Y+ L+N   K+G     
Sbjct: 188 GLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREG 247

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            Q+ E M   G   N   YN L+   C  G ++++ +    + +KG+     TY+ L+  
Sbjct: 248 FQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             + +    A+KL+  +   G  PN+V+YN+L+ G C  G+ + A+R F  L S G  P 
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           +V+YN L+           A +L+ EM+    + + VTY ILI + A    TD A ++  
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHS 427

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
            M K    P   +Y+ +I   C                                    G 
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGXCVN----------------------------------GN 453

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++EA    +SLG          Y  +I   C++G +Y+A +LL EM   G  P+  ++ S
Sbjct: 454 MKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            +  LC +   +EA  +   M     KP V 
Sbjct: 514 TMGLLCRDEKWKEAELLLGQMINSGLKPSVS 544



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 138/301 (45%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           + F   E M   G  P+      L+ + C    + KA KV   M   GI     +Y  L+
Sbjct: 246 EGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LC+    G A++LV K+   G   N VTYN L+ G C +G ++ +++  ++L   GL 
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P   TY+ L+    K   +  A+ L+ ++  +    + V+Y +L+    +   T++A   
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEM 425

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G  P+V +Y++L+   C+ G  +EA++    +      P  V YN +I     
Sbjct: 426 HSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G +  AL++L+EMV     P+ AS+   +  LC + K       L QM +   KP+   
Sbjct: 486 EGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSL 545

Query: 381 Y 381
           Y
Sbjct: 546 Y 546



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 187/426 (43%), Gaps = 7/426 (1%)

Query: 120 VMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC 179
           ++  ++SSG++P A S   ++  +  +      +QL +        T T  Y+++V    
Sbjct: 44  ILNHLLSSGMLPQAQSL--ILRLISGRIPSSLMLQLTQA-HFTSCSTYTPLYDAIVNAYV 100

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
              + +Q+L FL  +I +G  P + T++ LL    +      A  + + + +K    N  
Sbjct: 101 HSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKSKV-VLNAY 159

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           S+ +++TG C+ G      R    L   G  PNVV Y  L+   C  G    A  L  +M
Sbjct: 160 SFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKM 219

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
           D     P   TY++L+      G      ++ + M +    P+A +YN +I+  C++G V
Sbjct: 220 DRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMV 279

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKY 417
           D   K   +M  +       TYN L   LC   K  EA  ++  + NK   SP    Y  
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV-NKVGLSPNIVTYNI 338

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C  GK   A +L  ++   G +P   TY++LI G      +  AL++   MEE  
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
                  +  L+    +   TD + E+  +M + G +P+  TY++L+ G      ++ ++
Sbjct: 399 IARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEAS 458

Query: 538 EVLKEL 543
           +  K L
Sbjct: 459 KPFKSL 464



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 129/271 (47%)

Query: 76  DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           D  ++ AF     M  KG    V+    L+  LC+  K  +A+K++  +   G+ P+  +
Sbjct: 276 DGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVT 335

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  L+N  C  G +  A++L  +++  G     VTYN+L+ G   + NL  +L  +  + 
Sbjct: 336 YNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           ++ +  +  TY+ L++A  +      A ++   +   G  P++ +Y+VL+ G C  G  +
Sbjct: 396 ERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMK 455

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA + F+ L     +PN V YN ++   C EG    A  LL EM      P + ++   +
Sbjct: 456 EASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTM 515

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G L    K   A  +L +M+    +PS + Y
Sbjct: 516 GLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 115/240 (47%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K  +A   + ++   G  P++V    L+   C   KM  A+++   + SSG+ P   
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+    K  N+  A+ LV++ME+     + VTY  L+     L   +++ +    +
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLM 429

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GLVP+ +TYS L+        +  A K    +     +PN V YN ++ G CKEG +
Sbjct: 430 EKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A+R   ++   G  PNV S+   +  LC + +W+EA  LL +M      P++  Y ++
Sbjct: 490 YRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 144/347 (41%), Gaps = 43/347 (12%)

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  ++ A         A+  L  +I +G  P   ++N LL  L +    ++A   F  L 
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK 151

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           SK    N  S+ I++   C  G +     LLA ++    SP +V Y  LI     +G   
Sbjct: 152 SK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNG--- 207

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
                 D M+                  C   ++ LV             PN+ TY+   
Sbjct: 208 ------DVMLAKNL-------------FCKMDRLGLV-------------PNQHTYS--V 233

Query: 386 MLCGV---GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKY 441
           ++ G    G  +E F + +++ N+    P  + Y  +I+  C  G   +AF++  EM + 
Sbjct: 234 LMNGFFKQGLQREGFQMYENM-NRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREK 292

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G      TY+ LI GLC      EA+++   + +    P++  +N L+ G C   + D +
Sbjct: 293 GIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTA 352

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + +F  +   G  P   TY  L+ G +  + L  + +++KE++ R +
Sbjct: 353 VRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 1/156 (0%)

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           S+    Y  ++ +      T QA   L+ M   G  P S T+++L+  L      ++A  
Sbjct: 86  STYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWW 145

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           IF V++      +  +F  ++ G C++        +  ++ E G  PN   YT L++G  
Sbjct: 146 IFNVLKS-KVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCC 204

Query: 529 HQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
              ++ L+  +  ++    +V       ++M   F+
Sbjct: 205 KNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFK 240


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 218/440 (49%), Gaps = 5/440 (1%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYP 165
           L  A  + KAI +   + +    P A +Y  ++  L  +G  G   +L  +M  E + +P
Sbjct: 169 LGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFP 228

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            +T+TY++L+   C LG  + + Q L+ + + G+ P    Y+ L+   +K   VH A+ L
Sbjct: 229 -DTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSL 287

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            +++  +  +P++ +Y  L+ GL K GR +EA  FF ++  +G  P+ V  N ++  L  
Sbjct: 288 FEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGK 347

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSL-AYHGKTDHALKVLDEMVKGRFRPSAA 344
            GR ++A +L  EM      P++VTYN +I +L     +        + M +    PS+ 
Sbjct: 348 AGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 407

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE-AFAIIQSL 403
           +Y+ +I   C   +++  +  L++M  +   P    Y  L    G  K  + A  + Q L
Sbjct: 408 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                SS    Y  +I  L + G+   A  +  EM K G  PD Y Y++L+ GL   G++
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGML 527

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +EAL     M+E+   PD++++N +L GL K+     ++E+   M +    P+  +Y  +
Sbjct: 528 DEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTV 587

Query: 524 VEGIAHQDELELSAEVLKEL 543
           +  ++H    E +A++++E+
Sbjct: 588 LGALSHAGMFEEAAKLMEEM 607



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 189/409 (46%), Gaps = 3/409 (0%)

Query: 89  MVSKGHK-PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           M ++GH  PD +  + L+   CK  +   A +++  M  +G+ P    YT L+    K  
Sbjct: 220 MSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLD 279

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +V  A+ L E+M       +  TY  L+RGL   G ++++  F   + ++G  P+    +
Sbjct: 280 DVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMN 339

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGRTEEAIRFFRDLPS 266
            ++    K   +  AMKL  ++      P++V+YN ++  L + + R  E   +F  +  
Sbjct: 340 NMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKE 399

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P+  +Y+IL+   C   R E+A  LL EMD     P    Y  LI +L    + D 
Sbjct: 400 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-A 385
           A ++  E+ +     SA  Y  +I  L   G++D  +   D+M    C P+   YN L +
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMS 519

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            L   G + EA + ++ +           Y  ++  L + G  ++A ++L  M +    P
Sbjct: 520 GLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP 579

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           D  +Y++++  L   G+ EEA ++   M    ++ D+  ++++L  + K
Sbjct: 580 DVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 175/376 (46%), Gaps = 6/376 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M   G +P     T L+    K + +  A+ + E M      PD  +YT L+  L K
Sbjct: 253 LNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGK 312

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A     +M+  G   +TV  N+++  L   G L+ +++    +     +P+  T
Sbjct: 313 AGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVT 372

Query: 206 YSFLLEAAYKERGVHAAM-KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           Y+ +++A ++ +   + +    + +   G  P+  +Y++L+ G CK  R E+A+    ++
Sbjct: 373 YNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM 432

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             KGF P   +Y  L+ +L    R++ A EL  E+     S +   Y ++I  L   G+ 
Sbjct: 433 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 492

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           D A+ + DEM K    P   +YN +++ L   G +D  +  + +M    C P+  +YN  
Sbjct: 493 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYN-- 550

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQE---FYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            +L G+ K       ++ L N + S+ +     Y  V+ +L   G   +A +L+ EM   
Sbjct: 551 IILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTL 610

Query: 442 GFTPDSYTYSSLIRGL 457
           GF  D  TYSS++  +
Sbjct: 611 GFEYDLITYSSILEAI 626



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 154/321 (47%), Gaps = 3/321 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A+     M  +G +PD V   N++  L KA ++  A+K+ + M +   IP   +Y 
Sbjct: 315 RIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYN 374

Query: 138 YLVNCLCK-KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            ++  L + K          E+M++ G   ++ TY+ L+ G C    + +++  L+ + +
Sbjct: 375 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 434

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG  P    Y  L++A  K +    A +L  ++    G  +   Y V++  L K GR ++
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 494

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           AI  F ++   G  P+V +YN L+  L   G  +EA   +  M      P I +YNI++ 
Sbjct: 495 AINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 554

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            LA  G    A+++L  M +   RP   SYN ++  L   G  +   K +++M     + 
Sbjct: 555 GLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEY 614

Query: 377 NEGTYNGLAMLCGVGKVQEAF 397
           +  TY+  ++L  +GKV   +
Sbjct: 615 DLITYS--SILEAIGKVDHEY 633



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 176/378 (46%), Gaps = 3/378 (0%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKG-LVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
            YNS++  L   G   +  +  + +  +G   P+  TYS L+ A  K     +A +LL++
Sbjct: 196 AYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNE 255

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +   G +P    Y +L+T   K      A+  F ++  +   P+V +Y  L+R L   GR
Sbjct: 256 MKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGR 315

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            +EA     EM      P  V  N +I  L   G+ D A+K+  EM   R  PS  +YN 
Sbjct: 316 IDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNT 375

Query: 349 IIARLC-SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNK 406
           II  L  S+ +   V    ++M      P+  TY+ L    C   ++++A  +++ +  K
Sbjct: 376 IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK 435

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  +I +L +  +   A +L  E+ +   +  +  Y+ +I+ L   G +++A
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDA 495

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           + +F  M +    PDV  +NAL+ GL ++   D +L   + M E G +P+  +Y I++ G
Sbjct: 496 INMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNG 555

Query: 527 IAHQDELELSAEVLKELQ 544
           +A       + E+L  ++
Sbjct: 556 LAKTGGPHRAMEMLSNMK 573


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 207/455 (45%), Gaps = 3/455 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDASSYT 137
            +DA     RM+     P +V    LL  + K       + +   + S G   P   + +
Sbjct: 36  FDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLS 95

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             +N L   G +G A  ++ K+   G+  +  T  +L++GLC+ G   ++L   D  + K
Sbjct: 96  IFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSK 155

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +   Y  L+    K      A++LL  +   G +PNL+ YN+++ GLCKEG   EA
Sbjct: 156 GFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEA 215

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD-GGDRSPTIVTYNILIG 316
                ++  KG   +V +YN L+   C  G+++ A  LL EM    D  P + T+NIL+ 
Sbjct: 216 CGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVD 275

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +L   G    A  V   M+K    P   S N ++   C  G +    +  D+M  R   P
Sbjct: 276 ALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLP 335

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  +Y+ L    C V  V EA  ++  +  +        Y  ++  L + G+    + L+
Sbjct: 336 NVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLV 395

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             M   G  PD  TY+ L+        +++AL +F  + +    P++  +N L+ GLCK 
Sbjct: 396 EAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKG 455

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            R   + E+FQ++  KG  PN  TY I++ G+  +
Sbjct: 456 GRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRRE 490



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 202/417 (48%), Gaps = 10/417 (2%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           AF  + ++V +G   D    T L+  LC   +  +A+ + +  VS G   D   Y  L+N
Sbjct: 110 AFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLIN 169

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
            LCK G    A++L+ KME  G   N + YN +V GLC  G + ++      ++ KG+  
Sbjct: 170 GLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICI 229

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRF 260
           + FTY+ L+           A++LL++++ K   +P++ ++N+L+  LCK G   EA   
Sbjct: 230 DVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNV 289

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +  +G EP+VVS N L+   C+ G   EA E+   M    + P +++Y+ LI     
Sbjct: 290 FGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCK 349

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
               D AL++L EM +    P   +YN ++  L   G+V      ++ M      P+  T
Sbjct: 350 VKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLIT 409

Query: 381 YNG-----LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           YN      L   C    + +A A+ Q + +   S     Y  +I  LC+ G+   A ++ 
Sbjct: 410 YNVLLDDYLKREC----LDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIF 465

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             ++  G  P+  TY+ +I GL  EGL++EA  + + M +  + P+   F+ L+  L
Sbjct: 466 QLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 201/442 (45%), Gaps = 3/442 (0%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           L K      A+     M+     P   S   L++ + K  +    + L   ++  G P  
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 168 T-VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           + VT +  +  L  LG +  +   + +++++G   + FT + L++    +     A+ L 
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLY 149

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           D  ++KG   + V Y  L+ GLCK G+T +AI   R +   G  PN++ YN+++  LC E
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV-KGRFRPSAAS 345
           G   EA  L +EM G      + TYN LI      G+   A+++L+EMV K   RP   +
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYT 269

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
           +N ++  LC  G V         M  R  +P+  + N L    C  G + EA  +   + 
Sbjct: 270 FNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMV 329

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            +        Y  +I   C+     +A +LL EM +    PD+ TY+ L+ GL   G + 
Sbjct: 330 ERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVL 389

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
              ++   M      PD+  +N LL    K    D +L +FQ +++ G  PN  TY IL+
Sbjct: 390 YEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILI 449

Query: 525 EGIAHQDELELSAEVLKELQLR 546
           +G+     ++ + E+ + L ++
Sbjct: 450 DGLCKGGRMKAAKEIFQLLSVK 471



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 163/373 (43%), Gaps = 36/373 (9%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSY 241
             + ++    R++     P+  + + LL +  K +     + L   + +KG  KP+LV+ 
Sbjct: 35  TFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTL 94

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           ++ +  L   G+   A      +  +GF  +  +   L++ LC++GR  EA  L      
Sbjct: 95  SIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVS 154

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
              S   V Y  LI  L   GKT  A+++L +M KG  RP+   YN ++  LC EG V  
Sbjct: 155 KGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTE 214

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS 421
                 +M  +    +  TYN L                                  I  
Sbjct: 215 ACGLCSEMVGKGICIDVFTYNSL----------------------------------IHG 240

Query: 422 LCRKGKTYQAFQLLYEMT-KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            C  G+   A +LL EM  K    PD YT++ L+  LC  G++ EA  +F +M +   +P
Sbjct: 241 FCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEP 300

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           DV + NAL+ G C       + EVF  M+E+G++PN  +Y+ L+ G      ++ +  +L
Sbjct: 301 DVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLL 360

Query: 541 KELQLRQVVSESA 553
            E+  R +V ++ 
Sbjct: 361 TEMHQRNLVPDTV 373


>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
 gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 205/416 (49%), Gaps = 18/416 (4%)

Query: 111 ANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME-DYGYPTNTV 169
           A   ++++K+ + M   GI P   ++  L++ L K+G  G A  L ++M   YG   ++ 
Sbjct: 151 AGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSY 210

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T+N+L+ G C    ++++ +    +      P+  TY+ +++   +   V  A  +L  +
Sbjct: 211 TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM 270

Query: 230 IAKGG--KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           + K     PN+VSY  L+ G C +   +EA+  F D+ S+G +PN V+YN L++ L    
Sbjct: 271 LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH 330

Query: 288 RWEEANELLAEMDGGDR----SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           R++E  ++L  + G D     +P   T+NILI +    G  D A+KV  EM+  +  P +
Sbjct: 331 RYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDS 388

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHR-------RCKPNEGTYNGL-AMLCGVGKVQE 395
           ASY+ +I  LC   + D      +++F +        CKP    YN +   LC  GK ++
Sbjct: 389 ASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQ 448

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  + + L  +    P   YK +IT  CR+GK   A++LL  M +  F PD  TY  LI 
Sbjct: 449 AEKVFRQLMKRGVQDPPS-YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLID 507

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           GL   G    A +    M    Y P    F+++L  L K +  + S  +  +M+EK
Sbjct: 508 GLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/545 (22%), Positives = 228/545 (41%), Gaps = 90/545 (16%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYLVNCLC 144
            + M   G  P V+   +LL  L K  +   A  +  EM  + G+ PD+ ++  L+N  C
Sbjct: 161 FQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFC 220

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG--LVPN 202
           K   V  A ++ + ME Y    + VTYN+++ GLC  G +  +   L  +++K   + PN
Sbjct: 221 KNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPN 280

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             +Y+ L+     ++ +  A+ +  D++++G KPN V+YN L+ GL +  R +E     +
Sbjct: 281 VVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDE----IK 336

Query: 263 DLPSKG------FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           D+   G      F P+  ++NIL+++ C  G  + A ++  EM      P   +Y++LI 
Sbjct: 337 DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396

Query: 317 SLAYHGKTDHALKVLDEMV-------KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +L    + D A  + +E+        K   +P AA+YNP+   LC+ GK     K   Q+
Sbjct: 397 TLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456

Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
             R  +        +   C  GK + A+ ++  +  ++     E Y+ +I  L + G+  
Sbjct: 457 MKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEAL 516

Query: 430 QAF-------------------QLLYEMTKYGFTPDSYTYSSL----------------I 454
            A                     +L E+ K  F  +S+   +L                +
Sbjct: 517 LAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV 576

Query: 455 RGLCMEGLIEEALEI---------FVVMEEY-----------------------DYKPDV 482
           R L      E+A  I          V MEE                            D+
Sbjct: 577 RLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDI 636

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL---VEGIAHQDELELSAEV 539
           D  N ++ GLCK +R   +  ++  ++E G     + + +L   +E     +EL+  ++ 
Sbjct: 637 DTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKR 696

Query: 540 LKELQ 544
           +  L+
Sbjct: 697 MATLR 701



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 192/442 (43%), Gaps = 58/442 (13%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA- 222
           +P+ T++  ++++ L ++      L+F D +  KG      ++  +LE   + R ++ A 
Sbjct: 61  HPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVAR 120

Query: 223 -------------------------------------MKLLDDIIAKGGKPNLVSYNVLL 245
                                                +KL   +   G  P+++++N LL
Sbjct: 121 NFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL 180

Query: 246 TGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + L K GRT  A   F ++  + G  P+  ++N L+   C     +EA  +  +M+    
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC 240

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLV 362
           +P +VTYN +I  L   GK   A  VL  M+K      P+  SY  ++   C + ++D  
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEA 300

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF------YK 416
           V     M  R  KPN  TYN L  + G+ +    +  I+ +    N +   F      + 
Sbjct: 301 VLVFHDMLSRGLKPNAVTYNTL--IKGLSEAHR-YDEIKDILIGGNDAFTTFAPDACTFN 357

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM-------EGLIEEALEI 469
            +I + C  G    A ++  EM      PDS +YS LIR LCM       E L  E  E 
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
            V++ + + KP    +N +   LC + +T  + +VF+ ++++G + +  +Y  L+ G   
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCR 476

Query: 530 QDELELSAEVLKELQLRQVVSE 551
           + + + + E+L  +  R+ V +
Sbjct: 477 EGKFKPAYELLVLMLRREFVPD 498



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 168/379 (44%), Gaps = 20/379 (5%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMK--KAIKVMEMMVSSGIIPDAS 134
            ++++A L    M+S+G KP+ V    L+  L +A++    K I +      +   PDA 
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+   C  G++  AM++ ++M +     ++ +Y+ L+R LCM    +++    + L
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414

Query: 195 IQKGLV-------PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
            +K ++       P A  Y+ + E          A K+   ++ +G + +  SY  L+TG
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITG 473

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            C+EG+ + A      +  + F P++ +Y +L+  L   G    A++ L  M      P 
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPV 533

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG---KVDLVVK 364
             T++ ++  LA     + +  ++  M++ R R +      ++  L S     K  L+V+
Sbjct: 534 ATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVR 593

Query: 365 CL-DQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            L D  +  + +        L  LC   K+ +A  ++     K      +    VI  LC
Sbjct: 594 LLYDNGYLVKME------ELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLC 647

Query: 424 RKGKTYQAFQLLYEMTKYG 442
           +  +  +AF L  E+ + G
Sbjct: 648 KHKRHSEAFSLYNELVELG 666



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 5/263 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDA 133
           R   L +   + E ++ K     +  A N +++ LC   K K+A KV   ++  G+  D 
Sbjct: 406 RAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDP 464

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            SY  L+   C++G    A +L+  M    +  +  TY  L+ GL  +G    +   L R
Sbjct: 465 PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQR 524

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +++   +P A T+  +L    K +  + +  L+  ++ K  + N+     ++  L    +
Sbjct: 525 MLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQ 584

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            E+A    R L   G+   +V    LL  LC   +  +A+ L+       +   I T N 
Sbjct: 585 KEKAFLIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNT 641

Query: 314 LIGSLAYHGKTDHALKVLDEMVK 336
           +I  L  H +   A  + +E+V+
Sbjct: 642 VIEGLCKHKRHSEAFSLYNELVE 664


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 221/493 (44%), Gaps = 39/493 (7%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC---- 142
           E M  +G +P+V     LL  LCK  K+  A K++  M   G +PD  SYT +V      
Sbjct: 169 ENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCED 228

Query: 143 ----------------------------LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
                                       LC++G VG    L+++M   G   N V+Y+S+
Sbjct: 229 GRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSV 288

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +  L  +G +  +L  L ++I++G  PN  T+S L++  +    V   + L   ++ +G 
Sbjct: 289 ISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGV 348

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF-EPNVVSYNILLRSLCMEGRWEEAN 293
           +PN+V YN LL GLC  G   EA+     +    F  PNV +Y+ L+      G  + A+
Sbjct: 349 RPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGAS 408

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           E+  +M      P +V Y  ++  L  +   D A +++D M      P+  ++N  I  L
Sbjct: 409 EVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGL 468

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
           C  G+V   ++ +DQM    C P+  TYN L   L  V +++EA  +I+ L  ++     
Sbjct: 469 CCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNL 528

Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-V 471
             Y  V+      GK     Q+L  M   G  PD+ T + +I      G +  A++    
Sbjct: 529 VTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDR 588

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG----I 527
           +    +  PD+    +LL G+C S   + ++     M+ KG  PN  T+ +LV G    +
Sbjct: 589 ITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKL 648

Query: 528 AHQDELELSAEVL 540
            H   + +  ++L
Sbjct: 649 GHMGPIRILDDIL 661



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 194/404 (48%), Gaps = 13/404 (3%)

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ----KGLVPNAFTYS 207
           A+++  +++++G       YN L+  L  LG        +  + +    +G+ PN FTY+
Sbjct: 127 ALKMFYRIKEFGCKPTVKIYNHLLDAL--LGESGNKFHMIGAVYENMRGEGMEPNVFTYN 184

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            LL+A  K   +  A KLL ++  +G  P+ VSY  ++  +C++GR EEA    R   ++
Sbjct: 185 VLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAE 244

Query: 268 GFEPNVVSY-NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           G    VVS  N L+  LC EGR  E   L+ EM G    P +V+Y+ +I  L+  G+ + 
Sbjct: 245 G----VVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVEL 300

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           AL VL +M++   RP+  +++ ++      G+V   V     M     +PN   YN L  
Sbjct: 301 ALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLN 360

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
            LC  G + EA  +   +       P    Y  ++    + G    A ++  +M   G  
Sbjct: 361 GLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVR 420

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+   Y+S++  LC   + ++A  +   M      P V  FN  + GLC   R   ++ V
Sbjct: 421 PNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRV 480

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
              M   G +P+  TY  L++G+   +EL+ + E+++EL+ R+V
Sbjct: 481 VDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKV 524



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 201/449 (44%), Gaps = 9/449 (2%)

Query: 116 KAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM--QLVEKMEDYGYPTNTVTYNS 173
           +A+K+   +   G  P    Y +L++ L  +    + M   + E M   G   N  TYN 
Sbjct: 126 RALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNV 185

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           L++ LC  G L+ + + L  + ++G VP+  +Y+ ++ A  ++  V  A     ++  + 
Sbjct: 186 LLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEA----REVARRF 241

Query: 234 GKPNLVSY-NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G   +VS  N L+ GLC+EGR  E      ++   G +PNVVSY+ ++  L   G  E A
Sbjct: 242 GAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELA 301

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             +L +M      P + T++ L+      G+    + +   MV    RP+   YN ++  
Sbjct: 302 LAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNG 361

Query: 353 LCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
           LC  G +   V    +M     C+PN  TY+ L       G +Q A  +   + N     
Sbjct: 362 LCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRP 421

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  ++  LC+     QA++L+  M   G  P   T+++ I+GLC  G +  A+ + 
Sbjct: 422 NVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVV 481

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             M+ Y   PD   +N LL GL        + E+ + + E+    N  TY  ++ G +  
Sbjct: 482 DQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSH 541

Query: 531 DELELSAEVLKELQLRQVVSESAVERLVM 559
            + E   +VL  + +  V  ++    +V+
Sbjct: 542 GKEEWVLQVLGRMLVNGVKPDAITVNVVI 570



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 182/386 (47%), Gaps = 3/386 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ + F  ++ MV  G  P+VV  ++++  L    +++ A+ V+  M+  G  P+  
Sbjct: 259 REGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVH 318

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +++ L+      G VG  + L   M   G   N V YN+L+ GLC  GNL +++    R+
Sbjct: 319 TFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM 378

Query: 195 IQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            +     PN  TYS L+    K   +  A ++ + ++  G +PN+V Y  ++  LCK   
Sbjct: 379 EKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSM 438

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            ++A R   ++ + G  P VV++N  ++ LC  GR   A  ++ +M      P   TYN 
Sbjct: 439 FDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNE 498

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L    +   A +++ E+ + +   +  +YN ++    S GK + V++ L +M    
Sbjct: 499 LLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNG 558

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
            KP+  T N +      +GKV+ A   +  +   +   P    +  ++  +C      +A
Sbjct: 559 VKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEA 618

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGL 457
              L +M   G  P+  T+  L+RG 
Sbjct: 619 IVYLNKMLNKGIFPNIATWDVLVRGF 644



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 134/268 (50%), Gaps = 23/268 (8%)

Query: 30  PNLHSFS-LNKGFIR---VLASTQVT-------ISPKDSVYTKPNRKPGNNNDTRHRDHK 78
           PN+ ++S L  GF++   +  +++V        + P   VYT       +  D   ++  
Sbjct: 386 PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYT-------SMVDVLCKNSM 438

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            + A+  ++ M + G  P VV     +  LC   ++  A++V++ M   G +PD  +Y  
Sbjct: 439 FDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNE 498

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ L     +  A +L+ ++E+     N VTYN+++ G    G     LQ L R++  G
Sbjct: 499 LLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNG 558

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK---PNLVSYNVLLTGLCKEGRTE 255
           + P+A T + ++ A  K   V  A++ LD I A  GK   P+++++  LL G+C     E
Sbjct: 559 VKPDAITVNVVIYAYSKLGKVRTAIQFLDRITA--GKELCPDIIAHTSLLWGICNSLGIE 616

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           EAI +   + +KG  PN+ ++++L+R  
Sbjct: 617 EAIVYLNKMLNKGIFPNIATWDVLVRGF 644



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 6/243 (2%)

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           T +TY+++I  L  + + D    +L +M   R   S  S+  ++    + G  D  +K  
Sbjct: 72  TPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMF 131

Query: 367 DQMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLC 423
            ++    CKP    YN L  A+L   G        +      +   P  F Y  ++ +LC
Sbjct: 132 YRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALC 191

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + GK   A +LL EM+K G  PD  +Y++++  +C +G +EEA E   V   +  +  V 
Sbjct: 192 KNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEARE---VARRFGAEGVVS 248

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             NAL+ GLC+  R      +   M+  G  PN  +Y+ ++  ++   E+EL+  VL ++
Sbjct: 249 VCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKM 308

Query: 544 QLR 546
             R
Sbjct: 309 IRR 311



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 75/138 (54%), Gaps = 1/138 (0%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           ++V    ++Y      K +  ++V+  M+ +G+ PDA +   ++    K G V  A+Q +
Sbjct: 527 NLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFL 586

Query: 157 EKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +++        + + + SL+ G+C    + +++ +L++++ KG+ PN  T+  L+   +K
Sbjct: 587 DRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFK 646

Query: 216 ERGVHAAMKLLDDIIAKG 233
           + G    +++LDDI+ KG
Sbjct: 647 KLGHMGPIRILDDILGKG 664


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 220/450 (48%), Gaps = 30/450 (6%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           MV+SG+ P+  ++  L+  LC  G +  A +L +KM + G   N  ++  LVRG C  G 
Sbjct: 47  MVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGF 106

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
            ++ L+ L  + + G  PN   Y+ L+ +  KE     A KL+D++   G  P++V++N 
Sbjct: 107 TSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNA 166

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGF----EPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            ++ LC  G+  EA R FRD+         +PN+++YN++L   C EG  EEA  L  +M
Sbjct: 167 RISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKM 226

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
              +      +YNI +  L   GK   A  VL EMV     P+  SYN ++  LC  G +
Sbjct: 227 KVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVL 286

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY-KY 417
                 +  M      P+  TY  L    C  GKV EA  +++ +  +   SP  +    
Sbjct: 287 FDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM-MRDGCSPNNYTCNI 345

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM---- 473
           ++ SL ++G+  +A +LL +M + G+  D+ T + +I GLC  G +++A+EI   M    
Sbjct: 346 LLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405

Query: 474 ---------------EEYDYK----PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
                          ++ D +    PD+ +++ ++ GLCK+ R   + + F  M+ K   
Sbjct: 406 SAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQ 465

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
           P+   Y + +     + ++  +  VLK+++
Sbjct: 466 PDSAIYDVFIHSFCKEGKISSAFRVLKDME 495



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 243/553 (43%), Gaps = 64/553 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA    ++M  KG +P+      L+   C+A    K ++++  M   G  P+   Y  
Sbjct: 72  LDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNT 131

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN-LNQSLQFLDRLIQK 197
           L++  CK+G    A +LV++M   G   + VT+N+ +  LC  G  L  S  F D  I +
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191

Query: 198 GL---VPNAFTYSFLLEAAYKE------RGVHAAMK------------------------ 224
            L    PN  TY+ +L    KE      R +   MK                        
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251

Query: 225 -----LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
                +L +++  G +PN+ SYN+++ GLCK G   +A    R + S G  P+ V+Y  L
Sbjct: 252 LEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTL 311

Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
           L   C  G+  EAN +L EM     SP   T NIL+ SL   G+   A ++L +M +  +
Sbjct: 312 LHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGY 371

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMF-----------------------HRRCKP 376
                + N +I  LC+ GK+D  ++ ++ M+                        ++C P
Sbjct: 372 VIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMP 431

Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  +Y+  ++ LC  G+V EA      +  K        Y   I S C++GK   AF++L
Sbjct: 432 DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVL 491

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +M K G      TY+SLI GL  +  I E   +   M E    PDV  +N +L  LC+ 
Sbjct: 492 KDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEG 551

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            R   +  V   M++KG  PN ++++IL++      +     E+  E+ L     + A+ 
Sbjct: 552 GRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIF-EIALNVCGHKEALY 610

Query: 556 RLVMQYDFEGIEV 568
            L       G EV
Sbjct: 611 SLTFNELLVGGEV 623



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 177/365 (48%), Gaps = 5/365 (1%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ + Y+ LL +  KE  V     L  D++A G  P   ++NVL+  LC  G  ++A   
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +P KG EPN  S+ IL+R  C  G   +  ELL EM     SP  V YN LI S   
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC----KP 376
            GKTD A K++DEM K    P   ++N  I+ LCS GKV    +    M         +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 377 NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TYN  L   C  G ++EA A+ + +   +N   +E Y   +  L R GK  +A  +L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G  P+ Y+Y+ ++ GLC  G++ +A  +  +M      PD   +  LL G C +
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            +   +  V + M+  G  PN  T  IL+  +  +  +  + E+L+++  +  V ++   
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 556 RLVMQ 560
            +V+ 
Sbjct: 379 NIVID 383



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 5/381 (1%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P +   YN L+R     G ++        ++  G+ P  +T++ L+        +  A +
Sbjct: 18  PPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 77

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           L D +  KG +PN  S+ +L+ G C+ G T + +    ++   GF PN V YN L+ S C
Sbjct: 78  LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM----VKGRFR 340
            EG+ ++A +L+ EM     SP +VT+N  I +L   GK   A ++  +M    V G  +
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAI 399
           P+  +YN ++   C EG ++      ++M       N  +YN  L  L  +GK+ EA  +
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           ++ + +         Y  V+  LC+ G  + A  L+  MT  G  PD+ TY++L+ G C 
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G + EA  +   M      P+    N LL  L K  R   + E+ Q M EKG + +  T
Sbjct: 318 TGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVT 377

Query: 520 YTILVEGIAHQDELELSAEVL 540
             I+++G+ +  +L+ + E++
Sbjct: 378 CNIVIDGLCNNGKLDKAIEIV 398



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 226/482 (46%), Gaps = 31/482 (6%)

Query: 105 LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY 164
           L  L +  K+ +A  V++ MV  G+ P+  SY  +++ LCK G +  A  L+  M   G 
Sbjct: 242 LLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGV 301

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
             +TVTY +L+ G C  G ++++   L  +++ G  PN +T + LL + +KE  +  A +
Sbjct: 302 LPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEE 361

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE-------------- 270
           LL  +  KG   + V+ N+++ GLC  G+ ++AI     + + G                
Sbjct: 362 LLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVD 421

Query: 271 ---------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
                    P+++SY+ ++  LC  GR  EA +   EM G +  P    Y++ I S    
Sbjct: 422 DSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKE 481

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           GK   A +VL +M K     +  +YN +I  L S+ ++  +   +D+M  R   P+   Y
Sbjct: 482 GKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIY 541

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N  L+ LC  G+V++A +++  +  K  S     +  +I + C K   + A   ++E+  
Sbjct: 542 NNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFC-KACDFSAVDEIFEIAL 600

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF--NALLLGLCKSRRT 498
                    YS     L + G + +A E+F      D   DV NF    L+  LCK  + 
Sbjct: 601 NVCGHKEALYSLTFNELLVGGEVVKAKELFET--ALDRSFDVGNFLYKDLIDHLCKDEKL 658

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLV 558
           D +  +   +I+KG   +  ++  +++G+  +     + E+ +++   ++ SE  V+  V
Sbjct: 659 DDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMM--EMASEGKVKNKV 716

Query: 559 MQ 560
            Q
Sbjct: 717 HQ 718



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 205/452 (45%), Gaps = 28/452 (6%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P    Y  L+    K+G V     L + M   G    T T+N L+  LC  G L+ + + 
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D++ +KG  PN +++  L+    +       ++LL ++   G  PN V YN L++  CK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG----GDRSP 306
           EG+T++A +   ++   G  P+VV++N  + +LC  G+  EA+ +  +M      G   P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            I+TYN+++G     G  + A  + ++M       +  SYN  +  L   GK+      L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 367 DQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
            +M     +PN  +YN  +  LC  G + +A  +++ + +         Y  ++   C  
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
           GK  +A  +L EM + G +P++YT + L+  L  EG I EA E+   M E  Y  D    
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQ-----------------------MPNETTYTI 522
           N ++ GLC + + D ++E+   M   G                        MP+  +Y+ 
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 438

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           ++ G+     +  + +   E+  + +  +SA+
Sbjct: 439 IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAI 470



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 201/442 (45%), Gaps = 49/442 (11%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L DA + +  M S G  PD V  T LL+  C   K+ +A  V+  M+  G  P+  +   
Sbjct: 286 LFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNI 345

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+  L K+G +  A +L++KM + GY  +TVT N ++ GLC  G L+++++ ++ +   G
Sbjct: 346 LLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA-KGGKPNLVSYNVLLTGLCKEGRTEEA 257
                        AA    G ++ + L+DD  + K   P+L+SY+ +++GLCK GR  EA
Sbjct: 406 ------------SAALGNLG-NSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEA 452

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + F ++  K  +P+   Y++ + S C EG+   A  +L +M+    + T+ TYN LI  
Sbjct: 453 KKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMG 512

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    +      ++DEM +    P  + YN +++ LC  G+V      LD+M  +   PN
Sbjct: 513 LGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPN 572

Query: 378 EGTYN----GLAMLCGVGKVQEAFAI-IQSLGNKQNSSPQEF------------------ 414
             +++         C    V E F I +   G+K+      F                  
Sbjct: 573 ISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFET 632

Query: 415 ------------YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
                       YK +I  LC+  K   A  +L+++   G+  D  ++  +I GL   G 
Sbjct: 633 ALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGN 692

Query: 463 IEEALEIFVVMEEYDYKPDVDN 484
             EA E+   M E   +  V N
Sbjct: 693 KHEADELAEKMMEMASEGKVKN 714


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 202/459 (44%), Gaps = 36/459 (7%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           T L+   C A  +  A + +  ++ +G+ PD+ +YT  V   C+ G   +A +L   M  
Sbjct: 78  TTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQ 137

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G      TY +L++GLC  G + +++     +   G  P++  YS ++           
Sbjct: 138 RGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGE 197

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+ LL D + KG  PN+  YN L+ G C  G  E AI  F+ + SKG  PNV +Y  L+ 
Sbjct: 198 AVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLIC 257

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  G+ E A  L + M     +P +VTY  LI      G  +HA ++L  M      P
Sbjct: 258 GFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAP 317

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
           +  +   +I  LC  G+++   + L  +  +  K N+  Y  +   LC  GK   A  ++
Sbjct: 318 NEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLM 377

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG-------FT--------- 444
           Q +  +        Y  +I  LCR+ K  +A  LL +M + G       FT         
Sbjct: 378 QKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLRE 437

Query: 445 -------------------PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
                              PD  TY+  IR  C +G +E+A  + + M ++  +P++  +
Sbjct: 438 FRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTY 497

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           N L+ G         +    + MI+ G  PN+ +YT+L+
Sbjct: 498 NTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 193/445 (43%), Gaps = 36/445 (8%)

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           ME + +   + +  +YT L+N  C  G++  A + +  +   G   ++  Y S V G C 
Sbjct: 62  MESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCR 121

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
            G    + +    + Q+G     FTY+ LL+       V  AM +   +   G  P+   
Sbjct: 122 TGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHV 181

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y++++ GLC  GR  EA+    D   KGF PNV  YN L+   C  G  E A ++   M 
Sbjct: 182 YSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQ 241

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P + TY  LI      GK + A+ +   M++    P+  +Y  +I   CSEG ++
Sbjct: 242 SKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLE 301

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
              + L  M      PNE T   L   LC  G+++EA   + SL  K     Q  Y  +I
Sbjct: 302 HAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMI 361

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI---------- 469
            +LC+ GK   A  L+ ++   GF PD++ YSSLI GLC E  + EA+ +          
Sbjct: 362 DALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQ 421

Query: 470 -----FVV--------------------MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
                F +                    M     KPDV  +   +   C+  R + +  +
Sbjct: 422 ANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESM 481

Query: 505 FQMMIEKGQMPNETTYTILVEGIAH 529
              MI+ G  PN TTY  L++G A+
Sbjct: 482 MIQMIDHGVRPNLTTYNTLIKGYAN 506



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 220/483 (45%), Gaps = 17/483 (3%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M SKG  P+V   T L+   CK+ K+++A+ +   M+ +G+ P+  +YT L+   C +G+
Sbjct: 240 MQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGH 299

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           + +A +L+  ME  G   N  T   L+  LC  G + ++ QFL  L+QKG+  N   Y+ 
Sbjct: 300 LEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTS 359

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +++A  K      A  L+  II +G  P+   Y+ L+ GLC+E +  EAI    D+   G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + N V + IL+     E R +    +   M      P +VTY + I S    G+ + A 
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAE 479

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN---GLA 385
            ++ +M+    RP+  +YN +I    + G V      L  M    CKPN+ +Y    GL 
Sbjct: 480 SMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLL 539

Query: 386 M--------------LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           +              L  +  ++    +++ +   Q SS    Y   I  L +  +  +A
Sbjct: 540 LKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEA 599

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
              L  M     TP    Y+ +I       L++EAL     M + +Y P ++++  ++  
Sbjct: 600 KSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICA 659

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           LC+      +  +F  ++ K    +E  + IL++G+  +      + +L  ++ +     
Sbjct: 660 LCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPG 719

Query: 552 SAV 554
           SA+
Sbjct: 720 SAI 722



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 210/483 (43%), Gaps = 17/483 (3%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  +A   L   + KG  P+V     L+   C    ++ AI + + M S G +P+  +YT
Sbjct: 194 RAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYT 253

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   CK G V  AM L  +M + G   N VTY +L++G C  G+L  + + L  +   
Sbjct: 254 QLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEAC 313

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN +T   L++A  K   +  A + L  ++ KG K N V Y  ++  LCK G+ + A
Sbjct: 314 GLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGA 373

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               + + ++GF P+   Y+ L+  LC E +  EA  LL +M         V + ILI  
Sbjct: 374 HNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDK 433

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                ++D    + D M     +P   +Y   I   C +G+++     + QM     +PN
Sbjct: 434 HLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPN 493

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF---- 432
             TYN L      +G V +AF+ ++++ +       E Y  ++  L +K   +       
Sbjct: 494 LTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSI 553

Query: 433 ------------QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
                       +LL E+ K   +  SY Y   IR L     +EEA    V M+  +  P
Sbjct: 554 SLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTP 613

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
             D +  ++    + +    +L     M+++  +P   +Y  ++  +  +     +  + 
Sbjct: 614 SEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIF 673

Query: 541 KEL 543
            ++
Sbjct: 674 GDI 676



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 173/373 (46%), Gaps = 5/373 (1%)

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N+L+  L   G L+     ++ L  +  V N  TY+ L+ A      + AA + L  ++ 
Sbjct: 47  NTLLMALARHGMLSD----MESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLR 102

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
            G  P+  +Y   + G C+ G    A R F  +P +G      +Y  LL+ LC  G   E
Sbjct: 103 AGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVRE 162

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A  + A M     +P    Y+I++  L   G+   A+ +L + +   F P+ A YN +I 
Sbjct: 163 AMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALID 222

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
             CS G ++L +     M  + C PN  TY  L    C  GKV+ A  +   +     + 
Sbjct: 223 GYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAP 282

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I   C +G    AF+LL+ M   G  P+ +T   LI  LC  G IEEA +  
Sbjct: 283 NVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL 342

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             + +   K +   + +++  LCKS + D +  + Q +I +G +P+   Y+ L++G+  +
Sbjct: 343 GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRE 402

Query: 531 DELELSAEVLKEL 543
           ++L  +  +L ++
Sbjct: 403 NKLLEAISLLNDM 415



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
           P +   N LL +L   G   +   L A M        + TY  LI +  + G    A + 
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMP----VRNLHTYTTLINAYCHAGDLPAAKRH 96

Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
           L  +++    P + +Y   +   C  G      +    M  R C     TY  L   LCG
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            G V+EA A+   +     +     Y  ++  LC  G+  +A  LL +    GF P+   
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y++LI G C  G +E A++IF  M+     P+V  +  L+ G CKS + + ++ ++  MI
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           E G  PN  TYT L++G   +  LE +  +L  ++
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME 311



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 171/400 (42%), Gaps = 17/400 (4%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++ +A   L  +V KG K + V  T+++  LCK+ K   A  +M+ +++ G +
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV 386

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PDA  Y+ L++ LC++  +  A+ L+  M + G   N V +  L+         +     
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            DR+   G+ P+  TY+  + +  ++  +  A  ++  +I  G +PNL +YN L+ G   
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA----------------NE 294
            G   +A    +++   G +PN  SY +LL  L  +  + +                  E
Sbjct: 507 LGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEE 566

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           LL E+     S     Y+  I  L+   + + A   L  M      PS   Y  +I    
Sbjct: 567 LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCY 626

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
               +   ++ LD M  R   P   +Y  +   LC  G    A +I   + +K+ +  + 
Sbjct: 627 RMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEI 686

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            +K +I  L +KG T    +LL  M +    P S  YS L
Sbjct: 687 AWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 121/299 (40%), Gaps = 51/299 (17%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ + +   +  +RM + G KPDVV  T  +   C+  +M+ A  +M  M+  G+ 
Sbjct: 432 DKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVR 491

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN----------------------- 167
           P+ ++Y  L+      G V  A   ++ M D G   N                       
Sbjct: 492 PNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVAD 551

Query: 168 ----------------------------TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
                                       +  Y+  +R L  +  L ++  FL  +    L
Sbjct: 552 SISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANL 611

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+   Y+ ++E  Y+ + +  A++ LD ++ +   P L SY  ++  LC+EG    A  
Sbjct: 612 TPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKS 671

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
            F D+ SK +  + +++ IL+  L  +G   + + LL+ M+  +  P    Y+ L G +
Sbjct: 672 IFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEI 730


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 12/462 (2%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
            FL+ + + S    PD+    +LL  L +A  ++   ++   M  + + PD  +Y  L+N
Sbjct: 116 GFLR-DSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLN 174

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK-- 197
            LCK G+VG A++++++M   G     +    N++V GLC +G L Q++ F+D  ++   
Sbjct: 175 GLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVH 234

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PNA TY+ L +A  +   +  A K++  +  +G  PN+++ N ++ GLC+ GR   A
Sbjct: 235 GCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAA 294

Query: 258 IRFFRDLPSKGFEP--NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           + FFR+  +   E   N V+Y+ L  +       + A EL  EM      P  V Y  +I
Sbjct: 295 LEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMI 354

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G+   A      M K  F+  A +YN +I   C + K+    + L++M     +
Sbjct: 355 SGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQ 414

Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE---FYKYVITSLCRKGKTYQAF 432
           P+  TYN L  L G+ K  +  A+ + LG+  +   Q     +  ++   C+ GKT +A 
Sbjct: 415 PDVYTYNTL--LSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           ++   M +    P++  Y++LI  LC    ++ A+++F  M E +   +V  +NALL GL
Sbjct: 473 RIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGL 532

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
              +  + + E+   M E+   PN  T  +L+E +    E E
Sbjct: 533 QDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETE 574



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 190/396 (47%), Gaps = 12/396 (3%)

Query: 163 GYPTNTVT-YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
           G P   ++ +NSL+  L   GNL    +    +    + P+  TY  LL    K   V  
Sbjct: 125 GAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGD 184

Query: 222 AMKLLDDIIAKGGK--PNLVSYNVLLTGLCKEGRTEEAIRFF--RDLPSKGFEPNVVSYN 277
           A+K+LD + + G    P++   N ++ GLCK GR ++AI F   R     G  PN V+YN
Sbjct: 185 ALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYN 244

Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE--MV 335
            L  + C  G    A +++A M+    +P ++T N +IG L   G+   AL+   E   V
Sbjct: 245 CLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTV 304

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GK 392
               R +A +Y+ + +       VD+ ++   +M     +P+   Y    M+ G+   G+
Sbjct: 305 WPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMY--FTMISGLTQAGR 362

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + +A     S+         + Y  +I   CRK K ++A++LL EM   G  PD YTY++
Sbjct: 363 LLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNT 422

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ GLC  G      E+   M +   +P V  F  L+ G CK+ +TD +L +F+ M E  
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             PN   Y  L++ +    E++++ ++  E++ + V
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNV 518



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 155/326 (47%), Gaps = 3/326 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM--EMMVSSGIIPDASSYTYLVNCL 143
           + RM  +G  P+V+    ++  LC+  ++  A++    +  V      +A +Y+ L +  
Sbjct: 263 VARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAF 322

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
               NV  AM+L  +M D+G+  + V Y +++ GL   G L  +      + + G   +A
Sbjct: 323 LHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDA 382

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
             Y+ L+    +++ +H A +LL+++   G +P++ +YN LL+GLCK G           
Sbjct: 383 KAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGH 442

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   G +P+VV++  L+   C  G+ +EA  +   MD     P  V YN LI  L    +
Sbjct: 443 MIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSRE 502

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A+K+ DEM +     +  +YN ++  L  +   +   + +D+M   RC PN  T + 
Sbjct: 503 VDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDV 562

Query: 384 L-AMLCGVGKVQEAFAIIQSLGNKQN 408
           L   L  +G+ +     +Q    K N
Sbjct: 563 LMEWLPEIGETERLKCFMQQRDQKDN 588



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 14/333 (4%)

Query: 222 AMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           A   L D +A G   P++  +N LLT L + G        F  +     +P+VV+Y ILL
Sbjct: 114 AAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILL 173

Query: 281 RSLCMEGRWEEANELLAEMD--GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
             LC  G   +A ++L  M   G D  P I   N ++  L   G+   A+  +DE ++  
Sbjct: 174 NGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHV 233

Query: 339 F--RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQE 395
               P+A +YN +    C  G + +  K + +M      PN  T N  +  LC VG+V  
Sbjct: 234 HGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGA 293

Query: 396 AFAIIQSLGNKQNSSPQE-----FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           A    +    K+   P+       Y  + ++         A +L +EM  +G  PD+  Y
Sbjct: 294 ALEFFR---EKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMY 350

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            ++I GL   G + +A      M++  +K D   +N L+ G C+ ++   + E+ + M  
Sbjct: 351 FTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKG 410

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            G  P+  TY  L+ G+    +     E+L  +
Sbjct: 411 VGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHM 443



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 1/286 (0%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F + +R V    + + V  + L       N +  A+++   M   G  PDA  Y  +++ 
Sbjct: 297 FFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISG 356

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           L + G +  A      M+  G+  +   YN L+ G C    L+++ + L+ +   GL P+
Sbjct: 357 LTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPD 416

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            +TY+ LL    K     A  +LL  +I  G +P++V++  L+ G CK G+T+EA+R FR
Sbjct: 417 VYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFR 476

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +     +PN V YN L+  LC     + A +L  EM   +    + TYN L+  L    
Sbjct: 477 SMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKK 536

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
             + A +++D M + R  P+  + + ++  L   G+ +  +KC  Q
Sbjct: 537 MAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETER-LKCFMQ 581



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 107/226 (47%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L DA      M   G K D      L+   C+  K+ +A +++E M   G+ PD  +Y 
Sbjct: 362 RLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYN 421

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G+     +L+  M D G   + VT+ +LV G C  G  +++L+    + + 
Sbjct: 422 TLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEA 481

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            + PN   Y+ L++   K R V  A+KL D++  K    N+ +YN LL GL  +   E+A
Sbjct: 482 RIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKA 541

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
                 +  +   PN V+ ++L+  L   G  E     + + D  D
Sbjct: 542 FELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFMQQRDQKD 587



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 92/182 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL++A+  LE M   G +PDV     LL  LCKA       +++  M+  G  P   
Sbjct: 394 RKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVV 453

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  LV+  CK G    A+++   M++     NTV YN+L+  LC    ++ +++  D +
Sbjct: 454 TFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEM 513

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            +K +  N  TY+ LL+    ++    A +L+D +  +   PN V+ +VL+  L + G T
Sbjct: 514 REKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGET 573

Query: 255 EE 256
           E 
Sbjct: 574 ER 575



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 19/257 (7%)

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           E A  L   +  G  +P I  +N L+ +L   G      ++   M     +P   +Y  +
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-------LCGVGKVQEAFAII-Q 401
           +  LC  G V   +K LD+M      P       +A+       LC +G++Q+A   + +
Sbjct: 173 LNGLCKSGHVGDALKVLDRM----SSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDE 228

Query: 402 SLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            + +    +P    Y  +  + CR G    A +++  M K G  P+  T +++I GLC  
Sbjct: 229 RMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRV 288

Query: 461 GLIEEALEIFVVMEEYDYKPDVD----NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           G +  ALE F   E+    P+       ++ L          D+++E+F  M + G  P+
Sbjct: 289 GRVGAALEFF--REKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPD 346

Query: 517 ETTYTILVEGIAHQDEL 533
              Y  ++ G+     L
Sbjct: 347 AVMYFTMISGLTQAGRL 363


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 242/517 (46%), Gaps = 71/517 (13%)

Query: 4   LLSSVSTL---ANPSPEPFR--KAYGFYSQIPNLHS-FSLNKGF-IRVLASTQVTISPKD 56
           L+SS + L    NP+P  F   K  G   +I   H+  SL++   ++ +AS  VT++   
Sbjct: 43  LVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILI 102

Query: 57  SVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKK 116
           + +++  + P               +F     ++ KG+ P+V+  T L+  LC       
Sbjct: 103 NCFSQLGQNPL--------------SFSVFANILKKGYDPNVITLTTLIKGLC------- 141

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
            +KV              SY  L+N LCK G    A+QL+ +++      N V YN+++ 
Sbjct: 142 -LKV--------------SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIID 186

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            +C +  +N++      ++ +G+ P+  TYS L+   +    +  A+ L + +I +  KP
Sbjct: 187 SMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKP 246

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           ++ ++N+L+ G CK+G+ +E    F  +  +G +PNVV+Y  L+   C+  +  +AN + 
Sbjct: 247 DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIF 306

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
             M  G  +P   +YNI+I       K D A+ +  +M      P+  +Y  +I  LC  
Sbjct: 307 NTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKS 366

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           GK+   +K +D+M  R   P+  TY+  L  LC   +V +A A++  L +          
Sbjct: 367 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD---------- 416

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
                         Q F+ L+     G+  D Y Y+ +I+G C++GL  EAL +   ME+
Sbjct: 417 --------------QVFEDLFVK---GYNLDVYAYTVMIQGFCVKGLFNEALALLSKMED 459

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
               PD   +  ++L L K    D++ ++ + MI +G
Sbjct: 460 NGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 221/495 (44%), Gaps = 57/495 (11%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           ++ +H L  +F +L  +  K   P + +   +L  L K N    AI +   M   GI  +
Sbjct: 37  KNDEHNLVSSFNRL--LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASN 94

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVT-------------YNSLVRGLC 179
             +   L+NC  + G    +  +   +   GY  N +T             Y +L+ GLC
Sbjct: 95  LVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLC 154

Query: 180 MLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLV 239
            +G    +LQ L R+  K + PN   Y+ ++++  K + V+ A  L  +++++G  P++V
Sbjct: 155 KVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVV 214

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +Y+ L++G    G+ ++AI  F  +  +  +P+V ++NIL+   C +G+ +E   + A M
Sbjct: 215 TYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 274

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                 P +VTY  L+       + + A  + + M +G   P   SYN +I   C   KV
Sbjct: 275 MKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKV 334

Query: 360 DLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
           D  +    +M  +   PN  TY  L                                  I
Sbjct: 335 DEAMNLFKKMHCKNIIPNVVTYTSL----------------------------------I 360

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY--- 476
             LC+ GK   A +L+ EM   G  PD  TYSS++  LC    +++A+ +   +++    
Sbjct: 361 DGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFE 420

Query: 477 -----DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
                 Y  DV  +  ++ G C     + +L +   M + G++P+  TY I++  +  +D
Sbjct: 421 DLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKD 480

Query: 532 ELELSAEVLKELQLR 546
           E +++ ++L+E+  R
Sbjct: 481 ENDMAEKLLREMIAR 495



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 23/319 (7%)

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           K   P +  +  +L  L K      AI   R +  KG   N+V+ NIL+      G+   
Sbjct: 54  KNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPL 113

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           +  + A +      P ++T   LI  L         LKV              SY  +I 
Sbjct: 114 SFSVFANILKKGYDPNVITLTTLIKGLC--------LKV--------------SYGTLIN 151

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC  G+    ++ L ++  +  +PN   YN +   +C V  V EAF +   + ++  S 
Sbjct: 152 GLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISP 211

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I+     GK   A  L  +M      PD YT++ L+ G C +G ++E   +F
Sbjct: 212 DVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF 271

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            +M +   KP+V  + +L+ G C  ++ + +  +F  M + G  P+  +Y I++ G    
Sbjct: 272 AMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKI 331

Query: 531 DELELSAEVLKELQLRQVV 549
            +++ +  + K++  + ++
Sbjct: 332 KKVDEAMNLFKKMHCKNII 350



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 8/138 (5%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAI--------KVME 122
           D   +  K++ A   ++ M  +G  PD++  +++L  LCK +++ KAI        +V E
Sbjct: 361 DGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFE 420

Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
            +   G   D  +YT ++   C KG    A+ L+ KMED G   +  TY  ++  L    
Sbjct: 421 DLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKD 480

Query: 183 NLNQSLQFLDRLIQKGLV 200
             + + + L  +I +GL+
Sbjct: 481 ENDMAEKLLREMIARGLL 498


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 226/478 (47%), Gaps = 29/478 (6%)

Query: 23  YGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDA 82
           YGF       HSF       + L +T     P  S  T           T H ++ ++DA
Sbjct: 5   YGFVPVSKKFHSF-------QFLINTHFNFIPYFSTST-----------TFHNNNDVDDA 46

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
                R++ +   P  ++   +L  L K+      + + + M   GI P+  +   L+N 
Sbjct: 47  VSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINS 106

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM----------LGNLNQSLQFLD 192
            C+ G++  A  ++ K+   GY  NT+T N+L++GLC+          +G L  ++   +
Sbjct: 107 FCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFN 166

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++I + + P+ +T++ L++   KE  V  A  +L  ++ +G KP +V+YN L+ G     
Sbjct: 167 KMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVK 226

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           +  +A   F  +   G  P++ SY+IL+   C     +EA ELL EM      P +VTY+
Sbjct: 227 QVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYS 286

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI  L   GK  +ALK++DEM      P+  +Y+ I+  LC   +VD  +  L QM ++
Sbjct: 287 SLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQ 346

Query: 373 RCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
             +PN  TY  L   LC  GK+++A  + + L  K ++     Y  +I   C KG   +A
Sbjct: 347 GIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEA 406

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             LL +M   G  P++ TY  +I  L  +   E A ++   M E ++   V   N L+
Sbjct: 407 LTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLI 464



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 199/443 (44%), Gaps = 46/443 (10%)

Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
           N +  A+ +   ++     P    +  ++  L K  +    + L +KME  G   N V  
Sbjct: 41  NDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 100

Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
           N L+   C LG+                +P+AF+                   +L  I+ 
Sbjct: 101 NILINSFCQLGH----------------IPSAFS-------------------VLTKILK 125

Query: 232 KGGKPNLVSYNVLLTGLCKEGRT----------EEAIRFFRDLPSKGFEPNVVSYNILLR 281
            G KPN ++ N L+ GLC  G+           ++A+  F  +  +   P+V ++ IL+ 
Sbjct: 126 MGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVD 185

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C EGR +EA  +LA M      P +VTYN L+       + + A  + + M +    P
Sbjct: 186 GFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSP 245

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAII 400
              SY+ +I   C    +D  ++ L +M H++  PN  TY+ L   LC  GK+  A  ++
Sbjct: 246 DIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLV 305

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             + ++        Y  ++ +LC+  +   A  LL +M   G  P+ YTY+ LI+GLC  
Sbjct: 306 DEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQS 365

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G +E+A ++F  +    +  +V  +  ++ G C     D +L +   M + G +PN  TY
Sbjct: 366 GKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTY 425

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
            I++  +  +DE E++ ++L E+
Sbjct: 426 EIIILSLFKKDENEMAEKLLCEM 448



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 157/287 (54%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ ++ +A   L  M+ +G KP VV   +L+       ++ KA  +   M   G+ 
Sbjct: 185 DGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVS 244

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  SY+ L+N  CK   +  AM+L+++M       N VTY+SL+ GLC  G ++ +L+ 
Sbjct: 245 PDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKL 304

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           +D +  +G  PN  TYS +L+A  K   V  A+ LL  +  +G +PN+ +Y +L+ GLC+
Sbjct: 305 VDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQ 364

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ E+A + F DL  KG   NV +Y ++++  C +G ++EA  LL++M+     P   T
Sbjct: 365 SGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKT 424

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           Y I+I SL    + + A K+L EM++  F    A  N +IA +   G
Sbjct: 425 YEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 173/369 (46%), Gaps = 34/369 (9%)

Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
           +++ ++   +RL+Q+   P    ++ +L +  K +  H  + L   +  +G KPNLV+ N
Sbjct: 42  DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101

Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           +L+   C+ G    A      +   G++PN ++ N L++ LC+ G+  + + ++      
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIV------ 155

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
                              GK   A+ + ++M+     P   ++  ++   C EG+V   
Sbjct: 156 -------------------GKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEA 196

Query: 363 VKCLDQMFHRRCKPNEGTYNGLA----MLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKY 417
              L  M  +  KP   TYN L     ++  V K +  F  +  LG     SP  + Y  
Sbjct: 197 KNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG----VSPDIQSYSI 252

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I   C+     +A +LL EM      P+  TYSSLI GLC  G I  AL++   M +  
Sbjct: 253 LINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             P++  ++++L  LCK+ + D ++ +   M  +G  PN  TYTIL++G+    +LE + 
Sbjct: 313 QPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDAR 372

Query: 538 EVLKELQLR 546
           +V ++L ++
Sbjct: 373 KVFEDLLVK 381



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 133/247 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++N A      M   G  PD+   + L+   CK   M +A+++++ M    IIP+  +Y+
Sbjct: 227 QVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYS 286

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LCK G + YA++LV++M D G P N VTY+S++  LC    ++ ++  L ++  +
Sbjct: 287 SLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQ 346

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN +TY+ L++   +   +  A K+ +D++ KG   N+ +Y V++ G C +G  +EA
Sbjct: 347 GIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEA 406

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +     +   G  PN  +Y I++ SL  +   E A +LL EM   +    +   N LI S
Sbjct: 407 LTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIAS 466

Query: 318 LAYHGKT 324
           +   G +
Sbjct: 467 IWVTGSS 473



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 32/264 (12%)

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR---PSAASY 346
           ++A  L   +   + +P  + +N ++GSL    K+ H   VL    K  FR   P+  + 
Sbjct: 44  DDAVSLFNRLLQQNPTPPNIEFNKILGSLV---KSKHYHTVLYLSQKMEFRGIKPNLVNC 100

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN 405
           N +I   C  G +      L ++     KPN  T N L   LC  GK+ +   I+     
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIV----- 155

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
                               GK   A  L  +M      PD YT++ L+ G C EG ++E
Sbjct: 156 --------------------GKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKE 195

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A  +  +M     KP V  +N+L+ G    ++ + +  +F  M + G  P+  +Y+IL+ 
Sbjct: 196 AKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILIN 255

Query: 526 GIAHQDELELSAEVLKELQLRQVV 549
           G      ++ + E+LKE+  +Q++
Sbjct: 256 GFCKIKMMDEAMELLKEMHHKQII 279


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 227/465 (48%), Gaps = 7/465 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A+  L +M  +G KPDVV  T L+  LC A ++  A  V   M +S   PD  +Y 
Sbjct: 256 RLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYI 315

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++     G+     ++   ++  GY  N V+Y + V  LC +G ++++L   D + QK
Sbjct: 316 TLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK 375

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G++P  ++Y+ L+    K    + A++L + +   G  PN  ++ + +    K G + +A
Sbjct: 376 GIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKA 435

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ +  + SKG  P+VV+ N +L  L   GR   A  +  E+     SP  +TY ++I  
Sbjct: 436 LKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKC 495

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +     D A+K+  EM++ R  P   + N +I  L   G+ +   K   ++     +P 
Sbjct: 496 CSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPT 555

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQL 434
           + TYN  LA L   GKV+E   +++  G   NS P     Y  V+  LC+ G+   A  +
Sbjct: 556 DCTYNTLLAGLGREGKVKEVMQLLE--GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDM 613

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           LY MT  G  PD  +Y++++ GL  E  ++EA  +F  M++    PD      +L    +
Sbjct: 614 LYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVR 672

Query: 495 SRRTDLSLE-VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
           S     +L  V + +++     + ++   L+EGI  +D  E S E
Sbjct: 673 SGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIE 717



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 201/437 (45%), Gaps = 34/437 (7%)

Query: 87   ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
            E ++    K D     +L+  + K +  +K+I+  E + SSG++ D    + ++  LCK 
Sbjct: 685  EYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKH 744

Query: 147  GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
                 A +LV+K E+ G    T +YN+L+ GL     ++ + +    + + G  P+ FTY
Sbjct: 745  KEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTY 804

Query: 207  SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
              +L+A  K   +   +K+ +++  KG K   V+YN +++GL K    +EAI  +  L S
Sbjct: 805  HLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS 864

Query: 267  KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            +GF P   +Y  LL  L  +G  E+A  L  EM      P    YNIL+      G T+ 
Sbjct: 865  EGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEK 924

Query: 327  ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
              ++ + MV+    P   SY  +I  LC++G+++  +    Q+     +P+  TYN    
Sbjct: 925  VCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYN---- 980

Query: 387  LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
                        +I  LG                   + G+  +A  L  +M K G  P+
Sbjct: 981  -----------LLIHGLG-------------------KSGRLEEALSLYNDMEKKGIAPN 1010

Query: 447  SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             YTY+SLI  L   G   EA +++  +    +KP+V  +NAL+ G   S   + +   + 
Sbjct: 1011 LYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYG 1070

Query: 507  MMIEKGQMPNETTYTIL 523
             MI  G  PN +TY  L
Sbjct: 1071 RMIVGGCRPNSSTYMQL 1087



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 230/519 (44%), Gaps = 42/519 (8%)

Query: 65  KPGNNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQAT---NLLYDLCKAN-KMKKAI 118
           +PG+  +  H  R     D    LE  +S   +P VV  T   N + +L +A+ ++    
Sbjct: 62  RPGDAGNVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVA 121

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           +V ++M    I  +  ++  +   +  +G +  A   +  M++ G   N  TYN L+  L
Sbjct: 122 QVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFL 181

Query: 179 CMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
              G   +++     +   G+VP   TYS L+ A  K R     + LL ++ A+G +PN+
Sbjct: 182 VKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNV 241

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
            SY + +  L + GR EEA R  R +  +G +P+VV+  +L++ LC  GR  +A ++  +
Sbjct: 242 YSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWK 301

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M   D+ P  VTY  L+      G +    ++ + +    +  +  SY   +  LC  G+
Sbjct: 302 MKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGR 361

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG------------- 404
           VD  +   D+M  +   P + +YN L +      +   A  +   +              
Sbjct: 362 VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVL 421

Query: 405 -----NKQNSSPQEFYKY-----------------VITSLCRKGKTYQAFQLLYEMTKYG 442
                 K   S +   +Y                 V+  L + G+   A ++ +E+   G
Sbjct: 422 FINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMG 481

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            +PD+ TY+ +I+        +EA++IF  M E    PDV   N+L+  L K+ R + + 
Sbjct: 482 ISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAW 541

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
           ++F  + E    P + TY  L+ G+  + +++   ++L+
Sbjct: 542 KIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 221/490 (45%), Gaps = 40/490 (8%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R+ K+ +    LE M S    P+++    +L  LCK  ++  A+ ++  M  +G +PD S
Sbjct: 568  REGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLS 627

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKME-----DYG-------------------------- 163
            SY  ++  L K+  +  A  +  +M+     DY                           
Sbjct: 628  SYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYI 687

Query: 164  -YPTNTV---TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
              P + V   + +SL+ G+       +S++F + +   GL+ +    S ++    K +  
Sbjct: 688  LQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEA 747

Query: 220  HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
             AA +L+      G      SYN L+ GL  E   + A   F ++   G +P+  +Y+++
Sbjct: 748  LAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLI 807

Query: 280  LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
            L ++    R E+  ++  EM       T VTYN +I  L      D A+ +  +++   F
Sbjct: 808  LDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGF 867

Query: 340  RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEA 396
             P+  +Y P++  L  +G ++      D+M    C+PN   YN   +L G    G  ++ 
Sbjct: 868  SPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYN--ILLNGYRIAGDTEKV 925

Query: 397  FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
              + +S+  +  +   + Y  VI +LC  G+         ++T  G  PD  TY+ LI G
Sbjct: 926  CELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHG 985

Query: 457  LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
            L   G +EEAL ++  ME+    P++  +N+L+L L K+ +   + ++++ ++ KG  PN
Sbjct: 986  LGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPN 1045

Query: 517  ETTYTILVEG 526
              TY  L+ G
Sbjct: 1046 VFTYNALIRG 1055



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 227/537 (42%), Gaps = 79/537 (14%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A  + E M SKG  PDVV    +LY L K  ++  A +V   + + GI PD  +YT ++ 
Sbjct: 435 ALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIK 494

Query: 142 CLCKKGNVGYAMQLVEKM-----------------------------------EDYGYPT 166
           C  K  N   AM++  +M                                   ++     
Sbjct: 495 CCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEP 554

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
              TYN+L+ GL   G + + +Q L+ +      PN  TY+ +L+   K   V+ A+ +L
Sbjct: 555 TDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDML 614

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             +   G  P+L SYN ++ GL KE R +EA   F  +  K   P+  +   +L S    
Sbjct: 615 YSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRS 673

Query: 287 GRWEEA-----------------------NELLAEMDGGDRS----PTIVTYNILIGSLA 319
           G  +EA                        E + + DG ++S      I +  +L+  L 
Sbjct: 674 GLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLF 733

Query: 320 YHGKTDHALK-----VLDEMVKGRFRP-----SAASYNPIIARLCSEGKVDLVVKCLDQM 369
                 H  K        E+VK +F          SYN +I  L  E  +D+  +   +M
Sbjct: 734 LSPIIRHLCKHKEALAAHELVK-KFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEM 792

Query: 370 FHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
               C P+E TY+   +L  +GK   +++   I + + NK   S    Y  +I+ L +  
Sbjct: 793 KRLGCDPDEFTYH--LILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSK 850

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
              +A  L Y++   GF+P   TY  L+ GL  +G IE+A  +F  M E   +P+   +N
Sbjct: 851 MLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYN 910

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            LL G   +  T+   E+F+ M+E+G  P+  +YT++++ +     L       K+L
Sbjct: 911 ILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 141/276 (51%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   +  ++ D     E M +KG+K   V    ++  L K+  + +AI +   ++S G  
Sbjct: 809  DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFS 868

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P   +Y  L++ L K GN+  A  L ++M + G   N   YN L+ G  + G+  +  + 
Sbjct: 869  PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             + ++++G+ P+  +Y+ +++    +  ++  +     +   G +P+L++YN+L+ GL K
Sbjct: 929  FESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 988

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             GR EEA+  + D+  KG  PN+ +YN L+  L   G+  EA ++  E+      P + T
Sbjct: 989  SGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFT 1048

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            YN LI   +  G  ++A      M+ G  RP++++Y
Sbjct: 1049 YNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 3/299 (1%)

Query: 83   FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            F +++R+   G  PD      +L  + K+ +++  +K+ E M + G      +Y  +++ 
Sbjct: 789  FSEMKRL---GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISG 845

Query: 143  LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            L K   +  A+ L  ++   G+     TY  L+ GL   GN+  +    D +++ G  PN
Sbjct: 846  LVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPN 905

Query: 203  AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
               Y+ LL             +L + ++ +G  P++ SY V++  LC +GR  + + +F+
Sbjct: 906  CAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFK 965

Query: 263  DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
             L   G EP++++YN+L+  L   GR EEA  L  +M+    +P + TYN LI  L   G
Sbjct: 966  QLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAG 1025

Query: 323  KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            K   A K+ +E++   ++P+  +YN +I      G  +       +M    C+PN  TY
Sbjct: 1026 KAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 135/324 (41%), Gaps = 3/324 (0%)

Query: 240 SYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           S N +L  +   GR  +  + F  +  +  + NV ++  +  ++ +EG    A   L  M
Sbjct: 103 SCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVM 162

Query: 300 DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
                     TYN LI  L   G    A+ V   M      P+  +Y+ ++         
Sbjct: 163 KEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDA 222

Query: 360 DLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
           + VV  L +M  R  +PN  +Y   + +L   G+++EA+ I++ +  ++   P      V
Sbjct: 223 ETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM-EEEGCKPDVVTNTV 281

Query: 419 -ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            I  LC  G+   A  + ++M      PD  TY +L+      G      EI+  ++   
Sbjct: 282 LIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADG 341

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
           Y  +V ++ A +  LC+  R D +L+VF  M +KG +P + +Y  L+ G    D    + 
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRAL 401

Query: 538 EVLKELQLRQVVSESAVERLVMQY 561
           E+   + +           L + Y
Sbjct: 402 ELFNHMNIHGPTPNGYTHVLFINY 425


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 205/421 (48%), Gaps = 1/421 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           ++++ C+  ++ +A +++E M S GI P A SY+ L++ LCKKG V  A+ L+E+M    
Sbjct: 329 VIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN 388

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              + VTY+SL  GLC  G    SL     L  +G   +  +Y+ L+     +R + +A 
Sbjct: 389 VKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSAC 448

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           KL+ ++   G  PN  ++N L+ G CK  R ++A+  F  +   G + N+ + NI+    
Sbjct: 449 KLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEF 508

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
             EG + EA +L+ E+      P   TYNI+I  L    KT+ A +VL  M+K    P A
Sbjct: 509 NREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCA 568

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
             YN +I     +      +    +M      P+  TY  L  M     K+QEA+ + + 
Sbjct: 569 IHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKE 628

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +  K     +  +  +I   C+ G    A+ L  EM+++G +P+  TY+ LI G      
Sbjct: 629 MIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKR 688

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +++A  +F  M+  +  PD   + AL+ G      +D   E+F  M E G  PN T Y  
Sbjct: 689 MDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYAT 748

Query: 523 L 523
           L
Sbjct: 749 L 749



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 219/448 (48%), Gaps = 8/448 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMK-----KAIKVMEMMVSSGIIPDASSYTYLV 140
            E +   G  P+V   T ++   CK +  K     KA +V+E M  +G  P   +Y   +
Sbjct: 236 FEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYI 295

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           + LC+ G V +A++L+  +     P N+  YN+++   C  G L+++ + L+ +   G+ 
Sbjct: 296 HGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGIS 355

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P A++YS L++   K+  V  A+ L+++++    KP+LV+Y+ L  GLCK G TE ++  
Sbjct: 356 PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSM 415

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F +L ++G++ +V+SYN L+    ++     A +L+ EM      P   T+N LI     
Sbjct: 416 FHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCK 475

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             + D AL+V   M+K   + +  + N +      EG     +K ++++      PN  T
Sbjct: 476 RQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT 535

Query: 381 YN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEM 438
           YN  +  LC   K ++A+ ++  +  K N  P    Y  +I    ++    +A  L  +M
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVML-KNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            K G  P   TY+ LI        ++EA  +F  M +    PD   F  ++ G CK    
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDM 654

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEG 526
             +  +++ M + G+ PN  TYT L++G
Sbjct: 655 KSAWALYEEMSQWGKSPNVVTYTCLIDG 682



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 223/472 (47%), Gaps = 15/472 (3%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F+Q  R    G + +++    LL    +AN+ +    + E +  SG  P+  +YT ++
Sbjct: 199 DVFVQARRF---GLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMM 255

Query: 141 NCLCKKG-----NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           N  CK       ++  A +++E+ME  G     VTY + + GLC  G +  +L+ +  L 
Sbjct: 256 NYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLR 315

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            +    N++ Y+ ++    +   +H A +LL+D+ + G  P   SY++L+ GLCK+G+ E
Sbjct: 316 IRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVE 375

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A+    ++     +P++V+Y+ L   LC  G  E +  +   +        +++YN LI
Sbjct: 376 KALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLI 435

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                      A K++ EM      P++ ++N +I   C   ++D  ++    M     +
Sbjct: 436 NGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQ 495

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAII---QSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            N  T N +A      G   EA  +I   Q LG   NS     Y  VI  LC++ KT +A
Sbjct: 496 LNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT---YNIVIKWLCKEQKTEKA 552

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           +++L  M K    P +  Y++LI G   +    +AL ++  M +    P +  +  L+  
Sbjct: 553 WEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINM 612

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                +   +  +F+ MI+KG +P+E  +T ++ G     +++ +  + +E+
Sbjct: 613 FSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEM 664



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 213/467 (45%), Gaps = 14/467 (2%)

Query: 98  VVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           ++ A  L+    + N +  A  V       G+  +  S  +L+NC  +     +   L E
Sbjct: 178 IIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFE 237

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL------QFLDRLIQKGLVPNAFTYSFLLE 211
           +++D G   N  TY  ++   C  G+  +++      + L+ +   G  P   TY   + 
Sbjct: 238 ELKDSGPSPNVFTYTIMMNYYCK-GSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIH 296

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
              +   V  A++L+ D+  +    N   YN ++   C+ G   EA     D+ S G  P
Sbjct: 297 GLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISP 356

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
              SY+IL+  LC +G+ E+A +L+ EM   +  P++VTY+ L   L   G T+ +L + 
Sbjct: 357 TAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMF 416

Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN----GLAML 387
             +    ++    SYN +I     +  +    K + +M      PN  T+N    G    
Sbjct: 417 HNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKR 476

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
             + K  E F I+  +G + N         +     R+G  ++A +L+ E+   G  P+S
Sbjct: 477 QRLDKALEVFTIMLKVGVQLNIFTCNI---MADEFNREGHFWEALKLINEVQDLGIVPNS 533

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           YTY+ +I+ LC E   E+A E+  VM + +  P   ++N L+ G  K      +L ++  
Sbjct: 534 YTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAK 593

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           M++ G  P+  TYT+L+   +++ +++ +  + KE+  + +V +  +
Sbjct: 594 MLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEII 640



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 6/310 (1%)

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           +++  NVL+    +     +A   F      G E N++S N LL       + E    L 
Sbjct: 177 SIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLF 236

Query: 297 AEMDGGDRSPTIVTYNILI-----GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
            E+     SP + TY I++     GS   +     A +VL+EM      P+  +Y   I 
Sbjct: 237 EELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIH 296

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSS 410
            LC  G V+  ++ +  +  R    N   YN +    C  G++ EAF +++ + +   S 
Sbjct: 297 GLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISP 356

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
               Y  +I  LC+KG+  +A  L+ EM +    P   TYSSL  GLC  GL E +L +F
Sbjct: 357 TAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMF 416

Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             +    YK DV ++N L+ G    R    + ++   M   G +PN  T+  L+ G   +
Sbjct: 417 HNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKR 476

Query: 531 DELELSAEVL 540
             L+ + EV 
Sbjct: 477 QRLDKALEVF 486



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 161/337 (47%), Gaps = 10/337 (2%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE- 291
           G + N++S N LL    +  +TE     F +L   G  PNV +Y I++   C +G + + 
Sbjct: 208 GLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYC-KGSFGKN 266

Query: 292 -----ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP-SAAS 345
                A E+L EM+    SPT+VTY   I  L   G  + AL+++ ++ + R +P ++  
Sbjct: 267 IDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDL-RIRNQPLNSYC 325

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
           YN +I   C  G++    + L+ M      P   +Y+ L   LC  G+V++A  +I+ + 
Sbjct: 326 YNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMV 385

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                     Y  +   LC+ G T  +  + + +   G+  D  +Y++LI G  ++  + 
Sbjct: 386 QSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMG 445

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            A ++   M      P+   FN L+ G CK +R D +LEVF +M++ G   N  T  I+ 
Sbjct: 446 SACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMA 505

Query: 525 EGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +    +     + +++ E+Q   +V  S    +V+++
Sbjct: 506 DEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKW 542



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 145/311 (46%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  M   G  P+      L++  CK  ++ KA++V  +M+  G+  +  +   + +   +
Sbjct: 451 VHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNR 510

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G+   A++L+ +++D G   N+ TYN +++ LC      ++ + L  +++  + P A  
Sbjct: 511 EGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIH 570

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++   K+     A+ L   ++  G  P++V+Y +L+       + +EA   F+++ 
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMI 630

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+ + +  ++   C  G  + A  L  EM    +SP +VTY  LI       + D
Sbjct: 631 KKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMD 690

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A  + ++M +    P   +Y  +I    S G  D V +  ++M      PN   Y  L 
Sbjct: 691 KADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLG 750

Query: 386 MLCGVGKVQEA 396
           +  GV + + A
Sbjct: 751 LHLGVVREEPA 761



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 156/363 (42%), Gaps = 64/363 (17%)

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEG--------------RWEEAN--------ELLA 297
           FF+ +   GF  ++ ++ I++  L   G               ++E N         LL 
Sbjct: 108 FFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLD 167

Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL-------------------------- 331
                    +I+  N+LI   A +     A  V                           
Sbjct: 168 SPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEAN 227

Query: 332 -DEMVKGRFR--------PSAASYNPIIARLC--SEGK-VDLV--VKCLDQMFHRRCKPN 377
             E ++  F         P+  +Y  ++   C  S GK +D+V   + L++M      P 
Sbjct: 228 QTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPT 287

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  LC  G V+ A  +I+ L  +        Y  VI   CR G+ ++AF+LL 
Sbjct: 288 VVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLE 347

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           +M  +G +P +Y+YS LI GLC +G +E+AL++   M + + KP +  +++L  GLCKS 
Sbjct: 348 DMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSG 407

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES-AVE 555
            T++SL +F  +  +G   +  +Y  L+ G   Q ++  + +++ E+++   V  S    
Sbjct: 408 LTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFN 467

Query: 556 RLV 558
           RL+
Sbjct: 468 RLI 470



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 107/244 (43%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D  +R+    +A   +  +   G  P+      ++  LCK  K +KA +V+ +M+ + + 
Sbjct: 506 DEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVF 565

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P A  Y  L++   K+ N   A+ L  KM   G P + VTY  L+        + ++   
Sbjct: 566 PCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYL 625

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              +I+KGLVP+   ++ ++    K   + +A  L +++   G  PN+V+Y  L+ G  K
Sbjct: 626 FKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFK 685

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             R ++A   F  +      P+ ++Y  L+      G  +   E+  EM      P    
Sbjct: 686 IKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTA 745

Query: 311 YNIL 314
           Y  L
Sbjct: 746 YATL 749


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 211/471 (44%), Gaps = 36/471 (7%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDV+   +LL  L K+ ++  A KV + M   G   D  S   LV  +C +G V    +L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE---- 211
           +E     G   N V YN+++ G C LG++  +      L  KG +P   T+  ++     
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 212 -----------AAYKERGVHAAMKLLDDII--------------------AKGGKPNLVS 240
                      +  KERG+  ++  L++II                    A   KP++ +
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YN+L+  LCKEG+ E A+ F  +   KG  PN +SY  L+++ C    ++ A++LL +M 
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P IVTY ILI  L   G  D A+ +  +++     P AA YN +++ LC  G+  
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
                  +M  R   P+   Y  L       G   EA  +      K        +  +I
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
              CR G   +A   +  M +    PD +TYS++I G   +  +  A++IF  ME+   K
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
           P+V  + +L+ G C      ++ E F+ M  +  +PN  TYT L+  +A +
Sbjct: 588 PNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 224/473 (47%), Gaps = 7/473 (1%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
           +++L+   ++  + KA+++ + +V     +PD  +   L++ L K   +G A ++ ++M 
Sbjct: 138 SHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMC 197

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
           D G   +  +   LV+G+C  G +    + ++    KG +PN   Y+ ++    K   + 
Sbjct: 198 DRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIE 257

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
            A  +  ++  KG  P L ++  ++ G CKEG    + R   ++  +G   +V   N ++
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
            +    G   +  E +  +   D  P + TYNILI  L   GK + A+  LDE  K    
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
           P+  SY P+I   C   + D+  K L QM  R CKP+  TY  L   L   G + +A  +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
              L ++  S     Y  +++ LC+ G+   A  L  EM      PD+Y Y++LI G   
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G  +EA ++F +  E   K DV + NA++ G C+S   D +L     M E+  +P++ T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557

Query: 520 YTILVEGIAHQDELELSAEVLKELQLRQ-----VVSESAVERLVMQYDFEGIE 567
           Y+ +++G   Q ++  + ++ + ++  +     V   S +     Q DF+  E
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/531 (23%), Positives = 213/531 (40%), Gaps = 90/531 (16%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E    KG  P++V    ++   CK   ++ A  V + +   G +P   ++  ++N  CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 146 KGN-------------------VGYAMQLVEKMEDYGY---PTNTV-------------T 170
           +G+                   V +   +++    +GY   P  ++             T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN L+  LC  G    ++ FLD   +KGL+PN  +Y+ L++A  K +    A KLL  + 
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
            +G KP++V+Y +L+ GL   G  ++A+     L  +G  P+   YN+L+  LC  GR+ 
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
            A  L +EM   +  P    Y  LI      G  D A KV    V+   +     +N +I
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQ 407
              C  G +D  + C+++M      P++ TY+   ++ G  K Q+   A  I + +   +
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYS--TIIDGYVKQQDMATAIKIFRYMEKNK 585

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG-LIEEA 466
                  Y  +I   C +G    A +   EM      P+  TY++LIR L  E   +E+A
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSR--------------RTDLSLEVFQMM---- 508
           +  + +M      P+   FN LL G  K                ++ L  E F  M    
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705

Query: 509 -------------------------------IEKGQMPNETTYTILVEGIA 528
                                          ++KG  P+  ++  ++ G  
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 187/439 (42%), Gaps = 16/439 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D ++R     D    +  +++   KPDV     L+  LCK  K + A+  ++     G+I
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SY  L+   CK      A +L+ +M + G   + VTY  L+ GL + G+++ ++  
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             +LI +G+ P+A  Y+ L+    K      A  L  +++ +   P+   Y  L+ G  +
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G  +EA + F     KG + +VV +N +++  C  G  +EA   +  M+     P   T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y+ +I           A+K+   M K + +P+  +Y  +I   C +G   +  +   +M 
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRK--- 425
            R   PN  TY  L   L       E       L       P E  +  ++    +K   
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677

Query: 426 -----------GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
                      G++    +  + M   G++  +  Y+S +  LC+ G+++ A      M 
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737

Query: 475 EYDYKPDVDNFNALLLGLC 493
           +  + PD  +F A+L G C
Sbjct: 738 KKGFSPDPVSFAAILHGFC 756



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 169/394 (42%), Gaps = 20/394 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+    KG  P+ +    L+   CK+ +   A K++  M   G  PD  +Y  L++ L  
Sbjct: 368 LDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV 427

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G++  A+ +  K+ D G   +   YN L+ GLC  G    +      ++ + ++P+A+ 
Sbjct: 428 SGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYV 487

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++   +      A K+    + KG K ++V +N ++ G C+ G  +EA+     + 
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +   P+  +Y+ ++     +     A ++   M+     P +VTY  LI      G   
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGK-VDLVVKCLDQMFHRRCKPNEGTYNGL 384
            A +   EM      P+  +Y  +I  L  E   ++  V   + M   +C PNE T+N  
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFN-- 665

Query: 385 AMLCGVGKVQEAFAIIQSLGNK--QNSSPQEF---------------YKYVITSLCRKGK 427
            +L G  K      + +  G+   Q+S   EF               Y   +  LC  G 
Sbjct: 666 CLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGM 725

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
              A     +M K GF+PD  ++++++ G C+ G
Sbjct: 726 VKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 156/333 (46%), Gaps = 16/333 (4%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           ++DA     +++ +G  PD      L+  LCK  +   A  +   M+   I+PDA  Y  
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++   + G+   A ++     + G   + V +N++++G C  G L+++L  ++R+ ++ 
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           LVP+ FTYS +++   K++ +  A+K+   +     KPN+V+Y  L+ G C +G  + A 
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS-PTIVTYNILIGS 317
             F+++  +   PNVV+Y  L+RSL  E    E      E+   ++  P  VT+N L+  
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670

Query: 318 L--------------AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
                          + HG++    +    M    +   AA+YN  +  LC  G V    
Sbjct: 671 FVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTAC 730

Query: 364 KCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQE 395
              D+M  +   P+  ++   L   C VG  ++
Sbjct: 731 MFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 210/423 (49%), Gaps = 17/423 (4%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++ DAF  L+ M S+G  P+ V    +++ LCK  K+ +A  +M  MV     P   ++
Sbjct: 95  NRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTF 150

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L++  C++ N+  A+ L+EK    G+  + VT   +V  LC  G + + ++ L+R+  
Sbjct: 151 NVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVES 210

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G V +   Y+ L++            ++L D+  KG  PN+ +YN+L +G C  G  + 
Sbjct: 211 MGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDS 270

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD------GGDRSPTIVT 310
           AI  F D+ + G   N ++Y+ L+R LC  GR E+  ++L  M+      GG  SP    
Sbjct: 271 AIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISP---- 326

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN +I  L    + + AL+ L +M K    P A   +  I   C+EG +    +  DQM 
Sbjct: 327 YNSIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCNEGSIGDAKRVYDQMI 384

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
                P+   Y  L    C  G V+EAF +I  + +         +  +I++ C +GK  
Sbjct: 385 KEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVG 444

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A +L+ +M   G  PD  +YS ++  LC +G  ++A+ +F+ M E D  PD   +N++L
Sbjct: 445 SALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 504

Query: 490 LGL 492
           L L
Sbjct: 505 LCL 507



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 214/440 (48%), Gaps = 15/440 (3%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           ++M+  G   D      L+  LC  N++  A K++++M S G  P+   Y  +++ LCK 
Sbjct: 70  KKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKN 129

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G VG A  L+ +M +   P++ VT+N L+   C   NL Q+L  L++    G VP+  T 
Sbjct: 130 GKVGRARSLMNEMVE---PSD-VTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTA 185

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++    K   V   +++L+ + + GG  ++V+YN L+ G C  G+ +   R  +D+  
Sbjct: 186 TKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEI 245

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KG  PNV +YNIL    C  G  + A +L  +M     +   +TY+ LI  L   G+ + 
Sbjct: 246 KGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMED 305

Query: 327 ALKVLDEM------VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             K+L+ M        GR  P    YN II  L  + + +  ++ L +M     +  + +
Sbjct: 306 GFKILELMEESRGGAGGRISP----YNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRS 361

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
              L   C  G + +A  +   +  +        Y  +I   C+ G   +AF+L+ EM  
Sbjct: 362 LRILG-FCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVD 420

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
           +G+ P + T+++LI   C +G +  AL++   M      PD+ +++ ++  LC       
Sbjct: 421 HGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQK 480

Query: 501 SLEVFQMMIEKGQMPNETTY 520
           ++ +F  M+EK  +P+ +T+
Sbjct: 481 AVRLFLQMVEKDILPDYSTW 500



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/499 (22%), Positives = 231/499 (46%), Gaps = 44/499 (8%)

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEM--------------------------- 123
           S G  PD      ++  L +A  +++ IKV+++                           
Sbjct: 4   SIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDL 63

Query: 124 --------MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLV 175
                   M+ +G+  D  ++  L+  LC    +G A +L++ M+  G   NTV YN+++
Sbjct: 64  AREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI 123

Query: 176 RGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK 235
             LC  G + ++   ++ +++    P+  T++ L+ A  +E  +  A+ LL+   + G  
Sbjct: 124 HALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFV 179

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P++V+   ++  LCK GR  E +     + S G   +VV+YN L++  CM G+ +  + +
Sbjct: 180 PDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRV 239

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L +M+     P + TYNIL       G  D A+ + ++M       +  +Y+ +I  LCS
Sbjct: 240 LKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCS 299

Query: 356 EGKVDLVVKCLDQMFHRRCKPNE--GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            G+++   K L+ M   R         YN  +++ G+ K  +    ++ L   +   P+ 
Sbjct: 300 GGRMEDGFKILELMEESRGGAGGRISPYN--SIIYGLYKKNQFEEALEFLTKMEKLFPRA 357

Query: 414 FYKYV-ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
             + + I   C +G    A ++  +M K G  P    Y  LI G C +G + EA E+   
Sbjct: 358 VDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINE 417

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           M ++ Y P    FNAL+   C   +   +L++ + M+ +G +P+  +Y+ +V+ + ++ +
Sbjct: 418 MVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGD 477

Query: 533 LELSAEVLKELQLRQVVSE 551
            + +  +  ++  + ++ +
Sbjct: 478 FQKAVRLFLQMVEKDILPD 496



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 191/421 (45%), Gaps = 41/421 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L  A + LE+  S G  PDVV AT ++  LCKA ++ + ++V+E + S G + D  
Sbjct: 159 QEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVV 218

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   C  G      ++++ ME  G   N  TYN L  G C  G L+ ++   + +
Sbjct: 219 AYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDM 278

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI-IAKGGKPNLVS-YNVLLTGLCKEG 252
              G+  N  TY  L+        +    K+L+ +  ++GG    +S YN ++ GL K+ 
Sbjct: 279 KTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKN 338

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           + EEA+ F   +  +   P  V  ++ +   C EG   +A  +  +M      P+++ Y 
Sbjct: 339 QFEEALEFLTKM--EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYV 396

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI      G    A ++++EMV   + P+A ++N +I+  C +GKV   +K ++ M  R
Sbjct: 397 CLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGR 456

Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            C P+ G+Y                            SP      ++ +LC KG   +A 
Sbjct: 457 GCLPDMGSY----------------------------SP------MVDALCNKGDFQKAV 482

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM---EEYDYKPDVDNFNALL 489
           +L  +M +    PD  T++S++  L  E +  E   +F +    E   YK     FN L 
Sbjct: 483 RLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLTAYRERLCYKKKKAGFNVLA 542

Query: 490 L 490
           +
Sbjct: 543 I 543


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 262/568 (46%), Gaps = 49/568 (8%)

Query: 8   VSTLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPG 67
           +S  A P+          + +I  LH+  L+    +   S+ +++    S++ K N    
Sbjct: 37  ISLAATPTMACILVRAKMHEEIEELHNLILSSSIQKTKLSSLLSVV---SIFAKSNH--- 90

Query: 68  NNNDTRHRDHKLNDAFLQLERMVSK--GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
                      ++ AF Q + + S+   +KP +     LL    +  +++    + + MV
Sbjct: 91  -----------IDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMV 139

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
             GI P+  ++  L+  LC    V  A +L ++M + G   N  T+  LVRG C  G  +
Sbjct: 140 LCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           + L+ L+ +   G++PN   Y+ ++ +  +E     + KL++ +  +G  P++V++N  +
Sbjct: 200 KGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRI 259

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGF----EPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
           + LCKEG+  +A R F D+    +     PN ++YN++L+  C  G  E+A  L   +  
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
            D   ++ +YNI +  L  HGK   A  VL +M+     PS  SYN ++  LC  G +  
Sbjct: 320 NDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSD 379

Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY-KYVI 419
               +  M      P+  TY  L    C VGKV  A +++Q +  + N  P  +    ++
Sbjct: 380 AKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNCLPNAYTCNILL 438

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME----- 474
            SL   G+  +A +LL +M + G+  D+ T + ++ GLC  G +++A+EI   M      
Sbjct: 439 HSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498

Query: 475 ------------------EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
                             E +  PD+  ++ LL GLCK+ R   +  +F  M+ +   P+
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPD 558

Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQ 544
              Y I +     Q ++  +  VLK+++
Sbjct: 559 SLAYNIFIHHFCKQGKISSAFRVLKDME 586



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 229/508 (45%), Gaps = 28/508 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV  G  P+      L+  LC ++ +  A ++ + M   G  P+  ++  LV   CK G 
Sbjct: 138 MVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
               ++L+  ME +G   N V YN++V   C  G  + S + ++++ ++GLVP+  T++ 
Sbjct: 198 TDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNS 257

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKG----GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            + A  KE  V  A ++  D+         +PN ++YN++L G CK G  E+A   F  +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
                  ++ SYNI L+ L   G++ EA  +L +M      P+I +YNIL+  L   G  
Sbjct: 318 RENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGML 377

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A  ++  M +    P A +Y  ++   CS GKVD     L +M    C PN  T N L
Sbjct: 378 SDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              L  +G++ EA  +++ +  K           ++  LC  G+  +A +++  M  +G 
Sbjct: 438 LHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497

Query: 444 T-----------------------PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
                                   PD  TYS+L+ GLC  G   EA  +F  M     +P
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQP 557

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D   +N  +   CK  +   +  V + M +KG   +  TY  L+ G+  ++++     ++
Sbjct: 558 DSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617

Query: 541 KELQLRQVVSESAVERLVMQYDFEGIEV 568
            E++ + +          +QY  EG +V
Sbjct: 618 DEMREKGISPNICTYNTAIQYLCEGGKV 645



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 221/484 (45%), Gaps = 28/484 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M S G  P+ V    ++   C+  +   + K++E M   G++PD  ++   ++ LCK
Sbjct: 205 LNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCK 264

Query: 146 KGNVGYAMQLVEKME--DY-GYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
           +G V  A ++   ME  +Y G P  N++TYN +++G C +G L  +    + + +   + 
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLV 324

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  +Y+  L+   +      A  +L  +I KG  P++ SYN+L+ GLCK G   +A    
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G  P+ V+Y  LL   C  G+ + A  LL EM   +  P   T NIL+ SL   
Sbjct: 385 GLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNM 444

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL--------------- 366
           G+   A ++L +M +  +     + N I+  LC  G++D  ++ +               
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504

Query: 367 --------DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
                   D +    C P+  TY+ L   LC  G+  EA  +   +  ++       Y  
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNI 564

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
            I   C++GK   AF++L +M K G      TY+SLI GL ++  I E   +   M E  
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKG 624

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
             P++  +N  +  LC+  + + +  +   M++K   PN  ++  L+       + +++ 
Sbjct: 625 ISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQ 684

Query: 538 EVLK 541
           EV +
Sbjct: 685 EVFE 688



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 212/456 (46%), Gaps = 28/456 (6%)

Query: 99  VQATNL-LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           +Q+ N+ L  L +  K  +A  V++ M+  GI P   SY  L++ LCK G +  A  +V 
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
            M+  G   + VTY  L+ G C +G ++ +   L  +++   +PNA+T + LL + +   
Sbjct: 386 LMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMG 445

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE------- 270
            +  A +LL  +  KG   + V+ N+++ GLC  G  ++AI   + +   G         
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505

Query: 271 ----------------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
                           P++++Y+ LL  LC  GR+ EA  L AEM G    P  + YNI 
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIF 565

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK   A +VL +M K     S  +YN +I  L  + ++  +   +D+M  +  
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGI 625

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            PN  TYN  +  LC  GKV++A  ++  +  K N +P  F +KY+I + C K   +   
Sbjct: 626 SPNICTYNTAIQYLCEGGKVEDATNLLDEMMQK-NIAPNVFSFKYLIGAFC-KVPDFDMA 683

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           Q ++E            YS +   L   G + +A E+   + +  ++     +  L++ L
Sbjct: 684 QEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSL 743

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           CK    +++  +   MI+KG   +      +++G+ 
Sbjct: 744 CKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLG 779



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 198/421 (47%), Gaps = 22/421 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA   +  M   G  PD V    LL+  C   K+  A  +++ M+ +  +P+A +   
Sbjct: 377 LSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ L   G +  A +L+ KM + GY  +TVT N +V GLC  G L+++++     I KG
Sbjct: 437 LLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE-----IVKG 491

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDD-IIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           +  +         AA    G ++ + L+DD +I     P+L++Y+ LL GLCK GR  EA
Sbjct: 492 MRVHG-------SAALGNLG-NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F ++  +  +P+ ++YNI +   C +G+   A  +L +M+      ++ TYN LI  
Sbjct: 544 KTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    +      ++DEM +    P+  +YN  I  LC  GKV+     LD+M  +   PN
Sbjct: 604 LGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPN 663

Query: 378 EGTYNGL-AMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             ++  L    C V      QE F    S+  ++    +  Y  +   L   G+  +A +
Sbjct: 664 VFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQK----EGLYSLMFNELLAAGQLLKATE 719

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  +   GF   ++ Y  L+  LC +  +E A  I   M +  Y  D      ++ GL 
Sbjct: 720 LLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLG 779

Query: 494 K 494
           K
Sbjct: 780 K 780



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/413 (21%), Positives = 174/413 (42%), Gaps = 60/413 (14%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++ A   L+ M+     P+      LL+ L    ++ +A +++  M   G   D  +  
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCN 470

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPT-----------------------NTVTYNSL 174
            +V+ LC  G +  A+++V+ M  +G                          + +TY++L
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           + GLC  G   ++      ++ + L P++  Y+  +    K+  + +A ++L D+  KG 
Sbjct: 531 LNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
             +L +YN L+ GL  + +  E      ++  KG  PN+ +YN  ++ LC  G+ E+A  
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATN 650

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           LL EM   + +P + ++  LIG+       D A +V +  V                   
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVS------------------ 692

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
                              C   EG Y+ +   L   G++ +A  +++++ ++       
Sbjct: 693 ------------------ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
            YK ++ SLC+K +   A  +L++M   G+  D      +I GL   G  +EA
Sbjct: 735 LYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEA 787



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 69/273 (25%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD++  + LL  LCKA +  +A  +   M+   + PD+ +Y   ++  CK+G +  A ++
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRV 581

Query: 156 VEKMEDYGYPTNTVTYNSLVRGL-----------------------------------CM 180
           ++ ME  G   +  TYNSL+ GL                                   C 
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCE 641

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK--------------------ERGVH 220
            G +  +   LD ++QK + PN F++ +L+ A  K                    + G++
Sbjct: 642 GGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLY 701

Query: 221 AAM--------------KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + M              +LL+ ++ +G +     Y  L+  LCK+   E A      +  
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMID 761

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           KG+  +  +   ++  L   G  +EAN    +M
Sbjct: 762 KGYGFDPAALMPVIDGLGKMGNKKEANNFAEKM 794



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 2/161 (1%)

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKY-VITSLCRKGKTYQAFQLLY-EMTKYGFTPDSYTY 450
           + +AF   Q + ++   +    Y Y V+   C + +  +    LY +M   G +P++YT+
Sbjct: 91  IDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTF 150

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           + LIR LC    ++ A E+F  M E   KP+   F  L+ G CK+  TD  LE+   M  
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMES 210

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            G +PN+  Y  +V     +   + S +++++++   +V +
Sbjct: 211 FGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPD 251



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 48/110 (43%)

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P  Y Y+ L+     E  +E    ++  M      P+   FN L+  LC S   D + E+
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           F  M EKG  PNE T+ ILV G       +   E+L  ++   V+    V
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVV 219



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 47/93 (50%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +  +L  A ++ KA +++E ++  G       Y  LV  LCKK  +  A  ++ KM D G
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKG 763

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           Y  +      ++ GL  +GN  ++  F +++++
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANNFAEKMME 796


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 211/443 (47%), Gaps = 3/443 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGII-PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           LL  L K  +    + +  ++ S   I P   +++ L+N   + G +G+A  L+  +   
Sbjct: 75  LLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKM 134

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
           G+  +     +L++GLC+ G + +++  L   + +G   +   Y  ++    K      A
Sbjct: 135 GFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDA 194

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           +++   +      PNL+ YN ++ GLCK+G  +EA     ++   G E +V SYN ++  
Sbjct: 195 IQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHG 254

Query: 283 LCMEGRWEEANELLAEMD-GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            C  GR++ A +LL EM   G   P + T+NILI  L   G+   A  V+  M+K  ++P
Sbjct: 255 FCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKP 314

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
              SYN ++   C  G V    +  D+M  R   PN  +Y  L    C V  V EA  ++
Sbjct: 315 DIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLL 374

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
             + NK        Y  ++  L + G++   + L+  M   G   D  TY+ L+      
Sbjct: 375 TEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKH 434

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
              ++AL +F  + E    P++  +N LL GLCKS R   + E+FQ++  KG  PN  TY
Sbjct: 435 EKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTY 494

Query: 521 TILVEGIAHQDELELSAEVLKEL 543
            I++ G+  +  L+ +  +L ++
Sbjct: 495 NIMIHGLCKEGFLDEAEALLYKM 517



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 210/435 (48%), Gaps = 2/435 (0%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           KP ++  + L+    +  +M  A  ++  ++  G   D    T L+  LC KG V  A+ 
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 155 LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
           L+ +  D G+  + V Y +++ GLC +G    ++Q   ++ +  + PN   Y+ +++   
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG-FEPNV 273
           K+  V  A  L  +++  G + ++ SYN ++ G C  GR + A++   ++  +G   P+V
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
            ++NIL+  LC  GR  EA  ++A M      P IV+YN L+      G    A +V D+
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           MV+    P+  SY  +I   C    VD  +  L +M ++   P+  TYN L   L   G+
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
               + +++++      +    Y  ++    +  K  +A  L   + + G +P+  TY+ 
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ GLC  G ++ A EIF ++     +P++  +N ++ GLCK    D +  +   M+   
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNN 521

Query: 513 QMPNETTYTILVEGI 527
            +PN  T+  +V  I
Sbjct: 522 YLPNYITFDTIVRAI 536



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 181/374 (48%), Gaps = 2/374 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L   V +G + D V    ++  LCK  K + AI++   M    + P+   Y  +++ LCK
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAF 204
           +G V  A  L  +M + G   +  +YNS++ G C +G    +++ LD ++ +G V P+ +
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T++ L++   K   V  A  ++  +I +G KP++VSYN L+ G C  G   EA + F  +
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +   PNV+SY  L+   C     +EA  LL EM   +  P  VTYN L+  L+  G++
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
            +   +++ M          +YN ++       K D  +     +      PN  TYN L
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNIL 462

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC  G+++ A  I Q L  K        Y  +I  LC++G   +A  LLY+M    +
Sbjct: 463 LDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNY 522

Query: 444 TPDSYTYSSLIRGL 457
            P+  T+ +++R +
Sbjct: 523 LPNYITFDTIVRAI 536



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 183/414 (44%), Gaps = 38/414 (9%)

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           +N L+  L  L   N  +     L  K  + P+  T+S L+ A  +   +  A  LL +I
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +  G + ++     L+ GLC +GR  EA+    +   +GF  + V Y  ++  LC  G+ 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            +A ++  +M      P ++ YN +I  L   G  D A  +  EMV+        SYN +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 350 IARLCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQ 407
           I   CS G+    VK LD+M  R +  P+  T+N L   LC +G+V EA+ ++  +  + 
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                  Y  ++   C  G   +A Q+  +M +    P+  +Y +LI G C   +++EA+
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRT----------------------------- 498
            +   M   +  PD   +N LL GL KS R+                             
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDY 431

Query: 499 ------DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
                 D +L +FQ +IE G  PN  TY IL++G+     L+ + E+ + L  +
Sbjct: 432 FKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAK 485



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 130/241 (53%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A+  +  M+ +G KPD+V    L+   C +  + +A +V + MV    +P+  SY 
Sbjct: 296 RVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYC 355

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N  CK   V  AM L+ +M +     +TVTYN L+ GL   G        ++ +   
Sbjct: 356 TLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRAS 415

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   +  TY+ LL+  +K      A+ L   II  G  PN+ +YN+LL GLCK GR + A
Sbjct: 416 GQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYA 475

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F+ L +KG +PN+ +YNI++  LC EG  +EA  LL +M   +  P  +T++ ++ +
Sbjct: 476 KEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535

Query: 318 L 318
           +
Sbjct: 536 I 536



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 59/108 (54%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K + A    + ++  G  P++     LL  LCK+ ++K A ++ +++ + G  
Sbjct: 429 DDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQ 488

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL 178
           P+  +Y  +++ LCK+G +  A  L+ KM +  Y  N +T++++VR +
Sbjct: 489 PNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 222/470 (47%), Gaps = 36/470 (7%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F ++ R  S    PD    + L+   C+  +++    V  +++ +G   +   +  L+  
Sbjct: 180 FDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKG 239

Query: 143 LCKKGNVGYAMQ-LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ-KGLV 200
           LC    +  A   L+ +M ++G   N V+YN+LV+G C      ++L+ L  +   +GL 
Sbjct: 240 LCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLS 299

Query: 201 --PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  +Y+ ++   ++E  V  A  L   +I +G  P++V+YN ++ GLCK    + A 
Sbjct: 300 CPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAK 359

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
             F+ +  KG +P+  +YN L+      G+W+E   LL EM   D  P    Y +L+  L
Sbjct: 360 AVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYL 419

Query: 319 AYHGKT---------------------DHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
             +G+                      D A+ + D+M +    P+  +Y  +I  LC  G
Sbjct: 420 CKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLG 479

Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +VD  +   +QM            N +  LC V K ++A  ++  + ++        +  
Sbjct: 480 RVDDAILKFNQMI-----------NEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNT 528

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++  LCR+G+  +A +L+  M + G  PD  +Y++L+ G C+ G  +EA ++  VM    
Sbjct: 529 LMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIG 588

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            KP+   +N LL G CK+RR D +  + + M+  G  P+  TY  ++ G+
Sbjct: 589 LKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGL 638



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 230/521 (44%), Gaps = 90/521 (17%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS--- 127
           D +  D   N   + L RM   G  P+VV    L+   C  N+ ++A++++ +M      
Sbjct: 242 DAKRLDEATN---ILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGL 298

Query: 128 GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQS 187
              PD  SY  ++N   ++G V  A  L  +M D G P + VTYN+++ GLC    ++++
Sbjct: 299 SCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRA 358

Query: 188 LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
                +++ KG+ P+  TY+ L+            ++LL+++     +P+   Y +LL  
Sbjct: 359 KAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDY 418

Query: 248 LCKEGRT---------------------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           LCK GR                      +EA+  F  +  +G  PNVV+Y  L+ +LC  
Sbjct: 419 LCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKL 478

Query: 287 GR-----------------------WEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHG 322
           GR                       WE+A EL+ EM D G R   +V +N L+  L   G
Sbjct: 479 GRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRL-DVVVFNTLMCDLCREG 537

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           +   A ++++ M++   RP   SYN ++   C  G+ D   K LD M     KPNE T  
Sbjct: 538 RVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFT-- 595

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
                                           Y  ++   C+  +   A+ LL EM   G
Sbjct: 596 --------------------------------YNTLLHGYCKARRIDDAYSLLREMLMNG 623

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            TPD  TY++++ GL   G   EA E+++ M     + D+  +N +L GLCK+   D + 
Sbjct: 624 PTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAF 683

Query: 503 EVFQMMIEKGQMPNETTYTILV----EGIAHQDELELSAEV 539
           ++FQ +  KG   +  T+ I++    +G   +D ++L A +
Sbjct: 684 KMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATI 724



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 221/462 (47%), Gaps = 29/462 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +++ A+    +M+ +G  PDVV    ++  LCKA  + +A  V + M+  G+ P   
Sbjct: 316 REGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNG 375

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++     G     ++L+E+M  +    +   Y  L+  LC  G   ++    D +
Sbjct: 376 TYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSV 435

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I+KG+ P+A               +  A+ + D +  +G  PN+V+Y  L+  LCK GR 
Sbjct: 436 IRKGIKPDAM--------------IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRV 481

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNI 313
           ++AI  F  + ++ +             LC   +WE+A EL+ EM D G R   +V +N 
Sbjct: 482 DDAILKFNQMINEVY------------GLCTVEKWEKAEELVFEMLDQGIRL-DVVVFNT 528

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L   G+   A ++++ M++   RP   SYN ++   C  G+ D   K LD M    
Sbjct: 529 LMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIG 588

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            KPNE TYN L    C   ++ +A+++++ +     +     Y  ++  L + G+  +A 
Sbjct: 589 LKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAK 648

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +L   M       D YTY+ ++ GLC    ++EA ++F  +     +  +  FN ++  L
Sbjct: 649 ELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGAL 708

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
            K  + + ++++F  +   G +P+  TY ++ E +  +  LE
Sbjct: 709 LKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 750



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 179/367 (48%), Gaps = 16/367 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA L+  +M+            N +Y LC   K +KA +++  M+  GI  D   + 
Sbjct: 480 RVDDAILKFNQMI------------NEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFN 527

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  LC++G V  A +L+E M   G   + ++YN+LV G C+ G  +++ + LD ++  
Sbjct: 528 TLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSI 587

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL PN FTY+ LL    K R +  A  LL +++  G  P++V+YN +L GL + GR  EA
Sbjct: 588 GLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEA 647

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              + ++ +   + ++ +YNI+L  LC     +EA ++   +        I+T+NI+IG+
Sbjct: 648 KELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGA 707

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   GK + A+ +   +      P   +Y  I   L  EG ++ +      M      PN
Sbjct: 708 LLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPN 767

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
               N L       G +  A A +  L +++N S +     ++ SL  +G+  Q  + L 
Sbjct: 768 SRMLNALVRRFLHRGDISRAGAYLSKL-DEKNFSLEASTASMLISLYSRGEYQQLAKSLP 826

Query: 437 EMTKYGF 443
           E  KY F
Sbjct: 827 E--KYRF 831



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 149/297 (50%), Gaps = 1/297 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ ++ +A   +E M+  G +PDV+    L+   C   +  +A K++++MVS G+ P+  
Sbjct: 535 REGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEF 594

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK   +  A  L+ +M   G   + VTYN+++ GL   G  +++ +    +
Sbjct: 595 TYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNM 654

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           I      + +TY+ +L    K   V  A K+   + +KG + +++++N+++  L K G+ 
Sbjct: 655 INSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKK 714

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A+  F  + + G  P+V +Y ++  +L  EG  EE   L + M+    +P     N L
Sbjct: 715 EDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNAL 774

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           +    + G    A   L ++ +  F   A++ + +I+ L S G+   + K L + + 
Sbjct: 775 VRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLIS-LYSRGEYQQLAKSLPEKYR 830



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 152/387 (39%), Gaps = 79/387 (20%)

Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGL------------------------------- 248
           H A+KL D ++      ++ ++N LLT +                               
Sbjct: 133 HDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVA 192

Query: 249 -------------CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA-NE 294
                        C+ GR E     F  +   G+  N + +N LL+ LC   R +EA N 
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR---FRPSAASYNPIIA 351
           LL  M     +P +V+YN L+       + + AL++L  M   +     P   SYN +I 
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSS 410
               EG+VD       QM  R   P+  TYN  +  LC    V  A A+ Q + +K    
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG--------- 461
               Y  +I      GK  +  +LL EM+ +   PD + Y+ L+  LC  G         
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 462 ------------LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
                       +I+EA+ IF  M +    P+V N+ AL+  LCK  R D ++  F  MI
Sbjct: 433 DSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMI 492

Query: 510 ---------EKGQMPNETTYTILVEGI 527
                    EK +   E  + +L +GI
Sbjct: 493 NEVYGLCTVEKWEKAEELVFEMLDQGI 519



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 38/261 (14%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           +P   TY+ILIG     G+ +H   V   ++K  +R +   +N ++  LC   ++D    
Sbjct: 192 APDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATN 251

Query: 365 CL-DQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
            L  +M    C PN  +YN L                                  +   C
Sbjct: 252 ILLWRMPEFGCTPNVVSYNTL----------------------------------VKGFC 277

Query: 424 RKGKTYQAFQLLYEMTK---YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            + +  +A +LL+ M         PD  +Y+++I G   EG +++A  +F+ M +    P
Sbjct: 278 NENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPP 337

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           DV  +N ++ GLCK++  D +  VFQ M++KG  P+  TY  L+ G     + +    +L
Sbjct: 338 DVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLL 397

Query: 541 KELQLRQVVSESAVERLVMQY 561
           +E+    +  +  +  L++ Y
Sbjct: 398 EEMSTHDLEPDCFIYALLLDY 418


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 183/397 (46%), Gaps = 35/397 (8%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A KV + M  +G+ PD  S+  LV   C++G V     L+  M  YG+  +  T   +VR
Sbjct: 157 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 216

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            LC  G      +F  R+++ G  PN   Y+  ++   K R V  A  +L++++ +G KP
Sbjct: 217 SLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 276

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           N+ ++  L+ GLCK G TE A R F  L  S  ++PNV +Y +++   C EG+   A  L
Sbjct: 277 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 336

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L  M      P   TY  LIG     G  D A +++++M +  F P+  +YN +I   C 
Sbjct: 337 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 396

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           +                                  GK+QEA+ +++   ++     +  Y
Sbjct: 397 K----------------------------------GKIQEAYKVLRMATSQGLKFDKITY 422

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +IT  C++G    A  L   M + G  PD   Y+SLI   C +  +EE+ + F     
Sbjct: 423 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 482

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
               P    + +++ G CK  R+ ++L VF+ M++ G
Sbjct: 483 IGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNG 519



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 199/435 (45%), Gaps = 7/435 (1%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTY-LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
           M+  +      V+ G +P A      +V    + G +  A  +V +M  +G P    T N
Sbjct: 83  MRLYVTAATAFVARGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETAN 142

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
            ++R     G+   + +  D + + G+ P+  ++  L+    +E  V     LL  +   
Sbjct: 143 WVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRY 202

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G   +  +  V++  LC++GR ++   FFR +   G  PNVV+Y   +  LC     ++A
Sbjct: 203 GFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQA 262

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK-GRFRPSAASYNPIIA 351
             +L EM G    P + T+  LI  L   G T+ A ++  +++K   ++P+  +Y  +I 
Sbjct: 263 FHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIG 322

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSS 410
             C EGK+      L +M  +  KPN  TY  L    C  G    AF ++  +  KQ   
Sbjct: 323 GYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM--KQEGF 380

Query: 411 PQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
               Y Y  VI   C+KGK  +A+++L   T  G   D  TY+ LI   C +G I  AL+
Sbjct: 381 LPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALD 440

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +F  M E    PD++ + +L+   C+ R+ + S + F   +  G +P + TYT ++ G  
Sbjct: 441 LFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYC 500

Query: 529 HQDELELSAEVLKEL 543
                 ++  V + +
Sbjct: 501 KVGRSTMALRVFERM 515



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 1/298 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  D      RM+  G  P+VV  T  +  LCK   +K+A  V+E MV  G+ P+  ++T
Sbjct: 223 RFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHT 282

Query: 138 YLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            L++ LCK G    A +L  K+ +   Y  N  TY  ++ G C  G L ++   L R+++
Sbjct: 283 TLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 342

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +GL PN  TY+ L+    K      A +L++ +  +G  PN+ +YN ++ G CK+G+ +E
Sbjct: 343 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 402

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A +  R   S+G + + ++Y IL+   C +G    A +L   M      P I  Y  LI 
Sbjct: 403 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 462

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +     + + + K  D+ +     P+  +Y  +IA  C  G+  + ++  ++M    C
Sbjct: 463 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGC 520



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 158/361 (43%), Gaps = 2/361 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  PD      L+   C+  K+++   ++  M   G   D ++ T +V  LC+KG 
Sbjct: 164 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 223

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
                +   +M + G P N V Y + + GLC    + Q+   L+ ++ +GL PN +T++ 
Sbjct: 224 FKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 283

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           L++   K      A +L   +I     KPN+ +Y V++ G C+EG+   A      +  +
Sbjct: 284 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 343

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G +PN  +Y  L+   C  G ++ A EL+ +M      P I TYN +I      GK   A
Sbjct: 344 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 403

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
            KVL        +    +Y  +I   C +G +   +   D+M    C P+   Y  L + 
Sbjct: 404 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 463

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            C   +++E+               ++ Y  +I   C+ G++  A ++   M + G   D
Sbjct: 464 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFAD 523

Query: 447 S 447
           S
Sbjct: 524 S 524



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 153/331 (46%), Gaps = 2/331 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ K+ +    L  M   G   D    T ++  LC+  + K   +    M+  G  P+  
Sbjct: 185 REGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVV 244

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT  ++ LCK+  V  A  ++E+M   G   N  T+ +L+ GLC +G   ++ +   +L
Sbjct: 245 NYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKL 304

Query: 195 IQ-KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           I+     PN  TY+ ++    +E  +  A  LL  ++ +G KPN  +Y  L+ G CK G 
Sbjct: 305 IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGS 364

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A      +  +GF PN+ +YN ++   C +G+ +EA ++L            +TY I
Sbjct: 365 FDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 424

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI      G   +AL + D MV+    P   +Y  +I+  C + +++   K  D+     
Sbjct: 425 LITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 484

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSL 403
             P + TY  + A  C VG+   A  + + +
Sbjct: 485 LLPTKQTYTSMIAGYCKVGRSTMALRVFERM 515



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 8/263 (3%)

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           GR  EA +++ EM        + T N ++      G   +A KV D M +    P   S+
Sbjct: 117 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 176

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK---VQEAFAIIQS 402
             ++   C EGKV+ V   L  M+      +  T   +   LC  G+   V E F  +  
Sbjct: 177 RALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 236

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +G   N      Y   I  LC++    QAF +L EM   G  P+ YT+++LI GLC  G 
Sbjct: 237 MGTPPNVVN---YTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGW 293

Query: 463 IEEALEIFV-VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            E A  +F+ +++   YKP+V  +  ++ G C+  +   +  +   M+E+G  PN  TYT
Sbjct: 294 TERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYT 353

Query: 522 ILVEGIAHQDELELSAEVLKELQ 544
            L+ G       + + E++ +++
Sbjct: 354 TLIGGHCKGGSFDRAFELMNKMK 376



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 95/194 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ KL  A + L RMV +G KP+    T L+   CK     +A ++M  M   G +P+  
Sbjct: 326 REGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIY 385

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +++  CKKG +  A +++      G   + +TY  L+   C  G++  +L   DR+
Sbjct: 386 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 445

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+   Y+ L+    ++R +  + K  D  +  G  P   +Y  ++ G CK GR+
Sbjct: 446 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 505

Query: 255 EEAIRFFRDLPSKG 268
             A+R F  +   G
Sbjct: 506 TMALRVFERMVQNG 519


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 213/443 (48%), Gaps = 3/443 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M  +G KPDV   + ++ DL K  K+  A+++ + M    + PD + Y  L++   K
Sbjct: 172 LNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLK 231

Query: 146 KGNVGYAMQLVEK-MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           + +   AMQL +K +ED     N  T+N ++ GL   G ++  L+  DR+ Q     + +
Sbjct: 232 EKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLY 291

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TYS L+     E  V  A  + ++++ +    ++V+YN +L G C+ G+ +E++  +R +
Sbjct: 292 TYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM 351

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +    N+VSYNIL++ L   G+ +EA  +   M     +    TY I I  L  +G  
Sbjct: 352 EQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYV 410

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + AL V+ E+          +Y  II  LC + +++     + +M     + N    N L
Sbjct: 411 NKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNAL 470

Query: 385 -AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              L    ++ +A  +++ +G          Y  +I  LC  GK  +A   + EM + G 
Sbjct: 471 IGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGL 530

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD  TYS L+ GLC +  IE ALE++    +   +PDV   N L+ GLC   + D ++ 
Sbjct: 531 KPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMT 590

Query: 504 VFQMMIEKGQMPNETTYTILVEG 526
           V   M  +    N  TY  L+EG
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEG 613



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 229/466 (49%), Gaps = 7/466 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F ++  +   G +P +     LL    +A +  K   +     ++G+ P+  +Y  L+
Sbjct: 99  DVFKRMREIF--GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
              CKK     A   +  M   G+  +  +Y++++  L   G L+ +L+  D + ++ + 
Sbjct: 157 KMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVA 216

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIR 259
           P+   Y+ L++   KE+    AM+L D ++      PN+ ++N++++GL K GR ++ ++
Sbjct: 217 PDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            +  +     E ++ +Y+ L+  LC EG  ++A  +  E+        +VTYN ++G   
Sbjct: 277 IWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFC 336

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             GK   +L+ L  +++ R   +  SYN +I  L   GK+D        M  +    +  
Sbjct: 337 RCGKIKESLE-LWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNT 395

Query: 380 TYNGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
           TY G+ +  LC  G V +A  ++Q + +K        Y  +I  LC+K +  +A  L+ E
Sbjct: 396 TY-GIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKE 454

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M+K+G   +S+  ++LI GL  +  + +A  +   M +    P V ++N L+ GLC++ +
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGK 514

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              +    + M+E G  P+  TY+IL+ G+    ++EL+ E+  + 
Sbjct: 515 FGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQF 560



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 176/367 (47%), Gaps = 12/367 (3%)

Query: 97  DVVQATNLLYDLCKANKMKKAI---KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAM 153
           DVV    +L   C+  K+K+++   ++ME   S  I+    SY  L+  L + G +  A 
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIV----SYNILIKGLLENGKIDEAT 379

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
            +   M   GY  +  TY   + GLC+ G +N++L  +  +  KG   + + Y+ +++  
Sbjct: 380 MIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCL 439

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
            K+R +  A  L+ ++   G + N    N L+ GL ++ R  +A    R +   G  P V
Sbjct: 440 CKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTV 499

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           VSYNIL+  LC  G++ EA+  + EM      P + TY+IL+G L    K + AL++  +
Sbjct: 500 VSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQ 559

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
            ++    P    +N +I  LCS GK+D  +  +  M HR C  N  TYN L  + G  KV
Sbjct: 560 FLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL--MEGYFKV 617

Query: 394 QEA--FAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           +++    +I     K    P    Y  ++  LC   +   A +   +   +G  P  YT+
Sbjct: 618 RDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTW 677

Query: 451 SSLIRGL 457
           + L+R +
Sbjct: 678 NILVRAV 684



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 153/308 (49%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A +    M +KG+  D       ++ LC    + KA+ VM+ + S G   D  +Y 
Sbjct: 374 KIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYA 433

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++CLCKK  +  A  LV++M  +G   N+   N+L+ GL     L+ +   +  + + 
Sbjct: 434 SIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKN 493

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P   +Y+ L+    +      A   + +++  G KP+L +Y++LL GLC++ + E A
Sbjct: 494 GCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELA 553

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  +      G EP+V+ +NIL+  LC  G+ ++A  ++A M+  + +  +VTYN L+  
Sbjct: 554 LELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                 ++ A  +   M K   +P   SYN I+  LC   +V   ++  D   +    P 
Sbjct: 614 YFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPT 673

Query: 378 EGTYNGLA 385
             T+N L 
Sbjct: 674 VYTWNILV 681



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 112/209 (53%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +L+DA L +  M   G  P VV    L+  LC+A K  +A   ++ M+ +G+ PD  
Sbjct: 476 RDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLK 535

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+  LC+   +  A++L  +    G   + + +N L+ GLC +G L+ ++  +  +
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM 595

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +    N  TY+ L+E  +K R  + A  +   +   G +P+++SYN +L GLC   R 
Sbjct: 596 EHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRV 655

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
             AI FF D  + G  P V ++NIL+R++
Sbjct: 656 SYAIEFFDDARNHGIFPTVYTWNILVRAV 684



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 35/175 (20%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  +A   ++ M+  G KPD+   + LL  LC+  K++ A+++    + SG+ PD   + 
Sbjct: 514 KFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHN 573

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL----------------------- 174
            L++ LC  G +  AM ++  ME      N VTYN+L                       
Sbjct: 574 ILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKM 633

Query: 175 ------------VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
                       ++GLC+   ++ +++F D     G+ P  +T++ L+ A    +
Sbjct: 634 GLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQE 395
           +  SA  Y+ I+ RL     V  V + ++ +  + CK +E     L+++   GK      
Sbjct: 39  YAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDV--ALSVIKTYGKNSMPDR 96

Query: 396 AFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           A  + + +       P    Y  ++ +     +  +   L       G  P+  TY+ LI
Sbjct: 97  ALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           +  C +   E+A      M +  +KPDV +++ ++  L K+ + D +LE+F  M E+   
Sbjct: 157 KMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVA 216

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
           P+ T Y IL++G   + + +++ ++  +L
Sbjct: 217 PDVTCYNILIDGFLKEKDHKMAMQLWDKL 245


>gi|218196744|gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
          Length = 633

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 205/400 (51%), Gaps = 7/400 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC-LCKKGNVGYAM 153
           +PD    T +   L  A++   A+ V++ M + G+ PDA++ T LV    C+      A 
Sbjct: 179 RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAY 238

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           ++V  M   G   + VTY++L+ GLC  G + ++L  LD ++++G  PNA TY+ ++ A 
Sbjct: 239 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAY 298

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
                +H A +LL+ +IA G  P+  +YNVL+  LCK G  EE      +  +KG+ P+V
Sbjct: 299 CTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDV 358

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           ++Y+  +  LC  GR +++  L+ +M      P+ VT NIL+  +        A ++L+ 
Sbjct: 359 ITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLEC 418

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
             +  +  +  +YN ++ RLC E +   VVK    M  +   PN  T+N +   LC +G+
Sbjct: 419 SAELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGR 478

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + +A  +++S   K+  +    Y  +I  L   G+  +   LLY+M + G  P+  TYS 
Sbjct: 479 LHKALCLLRS---KEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSL 535

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +I  LC E     AL  F    E D+ P    F +++ GL
Sbjct: 536 VIDCLCREEKFLVALCCFYQSLEDDFFPSA--FLSIIRGL 573



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 195/400 (48%), Gaps = 9/400 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + + A+  +  MV+ G  PDVV  + L+  LC A ++ +A+ V+++M+  G  P+A 
Sbjct: 230 RLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAH 289

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT +V+  C  G +  A +L+  M   G+  +T TYN LV  LC +G   +    L+  
Sbjct: 290 TYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEES 349

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG  P+  TYS  ++   K   +  +  L+D +++ G +P+ V+ N+LL G+C+    
Sbjct: 350 TAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTA 409

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A R        G++ NVV+YN ++R LC E RW    +L  +M     +P   T+NI+
Sbjct: 410 WAAKRLLECSAELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIV 469

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + SL   G+   AL +L       F  +  +YN +I  L   G+ + V   L QM     
Sbjct: 470 VHSLCKLGRLHKALCLLRSK---EFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGI 526

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAII-QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            PN+ TY+  +  LC   K   A     QSL  + +  P  F   +I  L   G   Q  
Sbjct: 527 APNDITYSLVIDCLCREEKFLVALCCFYQSL--EDDFFPSAFLS-IIRGLIVGGMLGQLH 583

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
            L+  +   GF  + Y Y  LI+ LC  G   +++E++ V
Sbjct: 584 TLIGCVLGQGFIIEVYIYQELIKALCKNGYC-QSVEMYKV 622



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 178/371 (47%), Gaps = 9/371 (2%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA-AYKERGVHAAMKL 225
           +   + ++   L        +L  LD +   G+ P+A   + L+   A + R   AA ++
Sbjct: 181 DAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEV 240

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           +  ++A G  P++V+Y+ L++GLC  G+  EA+     +  +G +PN  +Y  ++ + C 
Sbjct: 241 VRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCT 300

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
            GR  EA  LL  M     +P+  TYN+L+ +L   G  +    +L+E     + P   +
Sbjct: 301 GGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVIT 360

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFA---IIQS 402
           Y+  +  LC  G++D     +D+M     +P+E T N   +L GV +   A+A   +++ 
Sbjct: 361 YSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLN--ILLDGVCRSSTAWAAKRLLEC 418

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
                  +    Y  V+  LC + +     +L  +M K G  P+S+T++ ++  LC  G 
Sbjct: 419 SAELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGR 478

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           + +AL    ++   ++   V  +N L+  L  S   +    +   MIE G  PN+ TY++
Sbjct: 479 LHKAL---CLLRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSL 535

Query: 523 LVEGIAHQDEL 533
           +++ +  +++ 
Sbjct: 536 VIDCLCREEKF 546



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 162/355 (45%), Gaps = 6/355 (1%)

Query: 201 PNAFTYSFLLEAAYKER---GVHAAMKLLDDIIAK-GGKPNLVSYNVLLTGLCKEGRTEE 256
           P+ + Y+ L+ A    R   G   A+ LLD++ A    +P+   +  +   L    R   
Sbjct: 141 PHPYDYNRLMSAHAGTRDGAGADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPGA 200

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRS-LCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           A+     + + G  P+  +  +L+    C   R++ A E++  M     +P +VTY+ LI
Sbjct: 201 ALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLI 260

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L   G+   AL VLD M++   +P+A +Y PI+   C+ G++    + L+ M      
Sbjct: 261 SGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFA 320

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  TYN L   LC VG  +E  A+++    K  +     Y   +  LC+ G+  ++F L
Sbjct: 321 PSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFAL 380

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + +M   G  P   T + L+ G+C       A  +     E  +  +V N+N ++  LC 
Sbjct: 381 VDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRRLCD 440

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            RR    +++F  M +KG  PN  T+ I+V  +     L  +  +L+  +    V
Sbjct: 441 ERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALCLLRSKEFVATV 495



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 127/288 (44%), Gaps = 13/288 (4%)

Query: 265 PSKGFEPNVVSYNILLRSLCME---GRWEEANELLAEMDGG-DRSPTIVTYNILIGSLAY 320
           P++   P+   YN L+ +          + A  LL EM     R P    +  +  +L+ 
Sbjct: 135 PTRPRSPHPYDYNRLMSAHAGTRDGAGADRALHLLDEMRALLRRRPDAACFTTVAAALSS 194

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIA-RLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             +   AL VLD M      P AA+   ++    C   + D   + +  M      P+  
Sbjct: 195 ASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVV 254

Query: 380 TYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TY+ L + LC  G+V EA  ++  +  +        Y  ++ + C  G+ ++A +LL  M
Sbjct: 255 TYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTM 314

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              GF P + TY+ L+  LC  G  EE   +        + PDV  +++ + GLCK+ R 
Sbjct: 315 IASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRI 374

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGI-------AHQDELELSAEV 539
           D S  +   M+  G  P+E T  IL++G+       A +  LE SAE+
Sbjct: 375 DKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAEL 422


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 229/506 (45%), Gaps = 37/506 (7%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AF   + MV  G  PD+    +LL  LC+   + +A + M  ++      D  +   L+
Sbjct: 473 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 532

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             +CK G +  A+ L EKM       +T TY  L+ G C  G +  +L  L  +++KGLV
Sbjct: 533 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV 592

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-------------------GGK------ 235
           P+   Y+ LL     E  V AA  +  +II K                   GG+      
Sbjct: 593 PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIER 652

Query: 236 -----------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
                      P+  SYN+L+ G  K+G+    +  +RD+  +G +P+ V+Y +L+  LC
Sbjct: 653 LMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLC 712

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G  E A + L +M      P  + ++ILI + +   K  +AL++   M      PS+ 
Sbjct: 713 EYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSK 772

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL 403
           +Y  ++  L  +  +    + L  M     +P    Y  L    C VG +  AF + + +
Sbjct: 773 TYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDM 832

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                   +     ++  LC+ GK  +A  +   + + G  P   T+++L+ GLC E  I
Sbjct: 833 KALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKI 892

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           ++A  +  +ME    K DV  +N L+ GLC  +    +L++++ M  KG +PN TTY  L
Sbjct: 893 DDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 952

Query: 524 VEGIAHQDELELSAEVLKELQLRQVV 549
              +     ++   ++LK+++ R +V
Sbjct: 953 TGAMYATGTMQDGEKLLKDIEDRGIV 978



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 249/545 (45%), Gaps = 88/545 (16%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYD--LCKANKMKKAIKVMEMMVSSGIIPD 132
           R  +++ A   L+ M++ G  PDV+  + L+ +  + +A + K+ +  M+      I  D
Sbjct: 401 RPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMK------ISFD 454

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL- 191
            +S+  +++  C++GNV  A  + + M  +G+P +  TY SL+RGLC  G+L Q+ +F+ 
Sbjct: 455 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 514

Query: 192 ----------------------------------DRLIQKGLVPNAFTYSFLLEAAYKER 217
                                             ++++ + ++P+ +TY+ LL+   K  
Sbjct: 515 YLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRG 574

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSY 276
            V  A+ LL  ++ KG  P+ ++Y  LL GL  EG+ + A   F+++  K G   + ++Y
Sbjct: 575 KVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAY 634

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N ++      G+  E   L+  M   +  P+  +YNIL+      G+    L +  +MVK
Sbjct: 635 NSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVK 694

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM------------------FHRRCK--- 375
              +P   +Y  +I  LC  G +++ VK L++M                  F  + K   
Sbjct: 695 EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSN 754

Query: 376 --------------PNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYV 418
                         P+  TY  +AM+ G+ +   +Q+++ I+  +           Y  +
Sbjct: 755 ALQLFSYMKWLHMSPSSKTY--VAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIAL 812

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I + CR G    AF+L  +M   G  P     SS++RGLC  G +EEA+ +F  +     
Sbjct: 813 INAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGM 872

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ----DELE 534
            P +  F  L+ GLCK  + D +  + Q+M   G   +  TY +L+ G+ ++    D L+
Sbjct: 873 VPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALD 932

Query: 535 LSAEV 539
           L  E+
Sbjct: 933 LYEEM 937



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 237/528 (44%), Gaps = 64/528 (12%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           +L L+  + +    DV     +L  LC   K+ KA  +++ M +  + P+A +Y  ++N 
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNW 273

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             KKG    A+++++ ME  G   +  TYN ++  LC L    ++   L R+ +  L P+
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPD 333

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             +Y+ L+   + E  ++ A+ + + ++ +  KP++ +Y  L+ G C+ GRT+EA R   
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLY 393

Query: 263 DLP--------------------SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
           ++                     + G +P+V++Y+ L+     EG   EA +    M   
Sbjct: 394 EMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMSRM 449

Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
             S  + ++N +I S    G    A  V D MV+  + P   +Y  ++  LC  G +   
Sbjct: 450 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 509

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVIT 420
            + +  +  + C  +E T N L + +C  G + EA  + + +  + N  P  + Y  ++ 
Sbjct: 510 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR-NILPDTYTYTILLD 568

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL-----------------CMEGL- 462
             C++GK   A  LL  M + G  PD+  Y+ L+ GL                 C EGL 
Sbjct: 569 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 628

Query: 463 ------------------IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
                             I E   +   M E +  P   ++N L+ G  K  +   +L +
Sbjct: 629 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 688

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           ++ M+++G  P+  TY +L+ G+     +E++ + L+++ L  V  ++
Sbjct: 689 YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 736



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 201/430 (46%), Gaps = 19/430 (4%)

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S   LVN   K+G V  A   +  M++ G+  +  + N+++  L  +        FL   
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKES 221

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +    +  T + +L +   +  +  A  +L   +     PN V+YN +L    K+GR 
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQK-MKNCRLPNAVTYNTILNWYVKKGRC 280

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+R   D+   G E ++ +YNI++  LC   R   A  LL  M   + +P   +YN L
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTL 340

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK + A+ + ++M++   +PS A+Y  +I   C  G+ D   + L +M     
Sbjct: 341 IHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGV 400

Query: 375 KPNEGTYNGLAMLC----GV-------------GKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +P E +     + C    G+             G + EA    Q +   + S     +  
Sbjct: 401 RPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNC 460

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I S C++G   +AF +   M ++G+ PD  TY SL+RGLC  G + +A E  V + E  
Sbjct: 461 IIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKA 520

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
              D    N LL+G+CK    D +L++ + M+ +  +P+  TYTIL++G   + ++ + A
Sbjct: 521 CAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV-VPA 579

Query: 538 EVLKELQLRQ 547
            +L ++ L +
Sbjct: 580 LILLQMMLEK 589



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 170/393 (43%), Gaps = 33/393 (8%)

Query: 173 SLVRGLCMLG-NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV---HAAMKLLDD 228
           S++R L + G + +     L R I +    N F+   L+ A  KE  V    AA+  +D+
Sbjct: 129 SVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDE 188

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
               G K +L S N +L  L    ++E    F ++   + F  +V + NI+L SLC +G+
Sbjct: 189 C---GFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGK 245

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
             +A  +L +M    R P  VTYN ++      G+   AL++LD+M K        +YN 
Sbjct: 246 LSKAESMLQKMKNC-RLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNI 304

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
           +I +LC   +       L +M      P+E +YN L     G GK+  A  I   +  + 
Sbjct: 305 MIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQS 364

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT--------------------KYGFTPDS 447
                  Y  +I   CR G+T +A ++LYEM                       G  PD 
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDV 424

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TYS+LI     EG+I EA +    M       DV +FN ++   C+      +  V+  
Sbjct: 425 ITYSALIN----EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDN 480

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           M+  G  P+  TY  L+ G+     L  + E +
Sbjct: 481 MVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 513



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/399 (21%), Positives = 174/399 (43%), Gaps = 34/399 (8%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           +++  E +  +G   D +   +++    K  ++ +  ++M  M  + + P ++SY  L++
Sbjct: 615 SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMH 674

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
              KKG +   + L   M   G   + VTY  L+ GLC  G +  +++FL++++ +G+ P
Sbjct: 675 GYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFP 734

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +   +  L++A  ++  +  A++L   +      P+  +Y  ++ GL ++   +++    
Sbjct: 735 DNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEIL 794

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            D+   G +P    Y  L+ + C  G  + A EL  +M      P+ V  + ++  L   
Sbjct: 795 HDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKC 854

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           GK + A+ V   +++    P+ A++  ++  LC E K+       D  FH +        
Sbjct: 855 GKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKI-------DDAFHLK-------- 899

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
                            +++S G K +      Y  +IT LC K     A  L  EM   
Sbjct: 900 ----------------QLMESCGLKVDVVT---YNVLITGLCNKKCICDALDLYEEMKSK 940

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           G  P+  TY +L   +   G +++  ++   +E+    P
Sbjct: 941 GLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 6/189 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           + + R   ++ AF   E M + G  P  V  ++++  LCK  K+++AI V   ++ +G++
Sbjct: 814 NAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV 873

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P  +++T L++ LCK+  +  A  L + ME  G   + VTYN L+ GLC    +  +L  
Sbjct: 874 PTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDL 933

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + +  KGL+PN  TY  L  A Y    +    KLL DI  +G  P+      L      
Sbjct: 934 YEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESL------ 987

Query: 251 EGRTEEAIR 259
           E R E AI+
Sbjct: 988 EWRMENAIK 996



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 90/198 (45%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R + L  ++  L  MV  G +P       L+   C+   +  A ++ E M + G++P   
Sbjct: 783 RKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEV 842

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           + + +V  LCK G V  A+ +   +   G      T+ +L+ GLC    ++ +      +
Sbjct: 843 AESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLM 902

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GL  +  TY+ L+     ++ +  A+ L +++ +KG  PN+ +Y  L   +   G  
Sbjct: 903 ESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTM 962

Query: 255 EEAIRFFRDLPSKGFEPN 272
           ++  +  +D+  +G  P+
Sbjct: 963 QDGEKLLKDIEDRGIVPS 980


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 213/455 (46%), Gaps = 11/455 (2%)

Query: 102 TNLLYDL-----CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           + +L+D      C+   + +AI+   +M   G  P   +  ++++ L +   +  A    
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
             M      +N  T+N ++  LC  G L ++  FL  +   G+ P   TY+ L++  Y  
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQG-YSL 273

Query: 217 RG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           RG +  A  ++ ++ +KG +P+L +YN +L+ +C EGR  E +R   ++   G  P+ VS
Sbjct: 274 RGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLR---EMKGIGLVPDSVS 330

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YNIL+R     G  E A     EM      PT  TYN LI  L    K + A  ++ E+ 
Sbjct: 331 YNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 390

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
           +      + +YN +I   C  G         D+M     KP + TY  L  +LC   K +
Sbjct: 391 EKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTR 450

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           EA  + + +  K           ++   C  G   +AF LL EM +    PD  TY+ L+
Sbjct: 451 EADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLM 510

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           RGLC EG  EEA E+   M+    KPD  ++N L+ G  K   T  +  V   M+  G  
Sbjct: 511 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFN 570

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           P   TY  L++G++   + EL+ E+L+E++   +V
Sbjct: 571 PTLLTYNALLKGLSKNQDGELAEELLREMKSEGIV 605



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 217/445 (48%), Gaps = 6/445 (1%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  KG  P      ++L  L + N+++ A      M    I  +  ++  ++N LCK+G 
Sbjct: 182 MKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 241

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A   +  ME +G     VTYN+LV+G  + G +  +   +  +  KG  P+  TY+ 
Sbjct: 242 LKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNP 301

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L     E     A ++L ++   G  P+ VSYN+L+ G    G  E A  +  ++  +G
Sbjct: 302 ILSWMCNE---GRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQG 358

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P   +YN L+  L ME + E A  L+ E+         VTYNI+I     HG    A 
Sbjct: 359 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAF 418

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            + DEM+    +P+  +Y  +I  LC   K     +  +++  +  KP+    N L    
Sbjct: 419 ALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 478

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           C  G +  AF++++ + ++ N  P +  Y  ++  LC +GK  +A +L+ EM + G  PD
Sbjct: 479 CATGNMDRAFSLLKEM-DRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 537

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             +Y++LI G   +G  + A  +   M    + P +  +NALL GL K++  +L+ E+ +
Sbjct: 538 HISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLR 597

Query: 507 MMIEKGQMPNETTYTILVEGIAHQD 531
            M  +G +PN++++  ++E ++  D
Sbjct: 598 EMKSEGIVPNDSSFCSVIEAMSKSD 622



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 200/422 (47%), Gaps = 4/422 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R +++ +A++    M     K +V     ++  LCK  K+KKA   + +M S GI P   
Sbjct: 203 RLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIV 262

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  LV     +G +  A  ++ +M+  G+  +  TYN ++  +C  G  ++ L+ +  +
Sbjct: 263 TYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGI 322

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              GLVP++ +Y+ L+        +  A    D+++ +G  P   +YN L+ GL  E + 
Sbjct: 323 ---GLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 379

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A    R++  KG   + V+YNI++   C  G  ++A  L  EM      PT  TY  L
Sbjct: 380 EAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSL 439

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    KT  A ++ +++V    +P     N ++   C+ G +D     L +M     
Sbjct: 440 IYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNI 499

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P++ TYN L   LCG GK +EA  ++  +  +        Y  +I+   +KG T  AF 
Sbjct: 500 DPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFI 559

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  EM   GF P   TY++L++GL      E A E+   M+     P+  +F +++  + 
Sbjct: 560 VRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMS 619

Query: 494 KS 495
           KS
Sbjct: 620 KS 621



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 175/390 (44%), Gaps = 37/390 (9%)

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           DRL  K  +     + F++    + R V  A++    +  KG  P   + N +L+ L + 
Sbjct: 149 DRLQTKSTI----LFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRL 204

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            R E A  F+ D+     + NV ++NI++  LC EG+ ++A   L  M+     PTIVTY
Sbjct: 205 NRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTY 264

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL----- 366
           N L+   +  G+ + A  ++ EM    F+P   +YNPI++ +C+EG+   V++ +     
Sbjct: 265 NTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGL 324

Query: 367 ---------------------------DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
                                      D+M  +   P   TYN L   L    K++ A  
Sbjct: 325 VPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI 384

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           +I+ +  K        Y  VI   C+ G   +AF L  EM   G  P  +TY+SLI  LC
Sbjct: 385 LIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLC 444

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
                 EA E+F  +     KPD+   N L+ G C +   D +  + + M      P++ 
Sbjct: 445 RRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDV 504

Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQV 548
           TY  L+ G+  + + E + E++ E++ R +
Sbjct: 505 TYNCLMRGLCGEGKFEEARELMGEMKRRGI 534


>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 221/494 (44%), Gaps = 69/494 (13%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   + + L+ A+L+ ++M S    PD      L++ +C+   + +A+++M+ M   G  
Sbjct: 237 DALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYF 296

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL------------ 178
           P+  +YT L++        G A ++++ M++     N  T  SLV G+            
Sbjct: 297 PNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFEL 356

Query: 179 ---------------------CMLGN--LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
                                C+  N   ++++ FL +  ++G VP++ T++  L    K
Sbjct: 357 LLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLK 416

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +  +     + D+ +  G KP   +Y  L+  L K G+ E   R+   L + G   N+ S
Sbjct: 417 KLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYS 476

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           YN+++  LC     + A+E+  ++     SP IVTYN LIG    +G  D A ++L+ ++
Sbjct: 477 YNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLL 536

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE 395
           + RFRP   ++N +I  LC   K +    C  +M      PN  TYN L           
Sbjct: 537 ESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNIL----------- 585

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
                                  I S C  G   ++  LL +M  +G  PD++++++LI+
Sbjct: 586 -----------------------ICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQ 622

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G   +   ++A ++F  M     +PD   + AL+  LCKS R D + E+F  M E G  P
Sbjct: 623 GYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTP 682

Query: 516 NETTYTILVEGIAH 529
           +  T ++  + +AH
Sbjct: 683 DSYTCSLFSDTLAH 696



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 183/440 (41%), Gaps = 37/440 (8%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           L K+N +  A    + M S   +PD  +Y  L++ +C+ G V  A++L+++ME  GY  N
Sbjct: 239 LIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPN 298

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
             TY  L+ G        ++ + L  + ++ +VPN  T   L+   ++      A +LL 
Sbjct: 299 VFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLL 358

Query: 228 DIIA-KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           + +  K G   LV  N+L   L       EA+ F      +G+ P+  ++NI L  +  +
Sbjct: 359 EFVERKQGITQLVCDNILYC-LSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKK 417

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
              +    +          P   TY  LI +L   GK +   + +D ++      +  SY
Sbjct: 418 LDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSY 477

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
           N +I  LC    +D   +    + +R   PN  TYN L                      
Sbjct: 478 NMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTL---------------------- 515

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                       I   CR G   +A +LL  + +  F PD +T++SLI GLC     E A
Sbjct: 516 ------------IGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENA 563

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
              F  M E+D  P+V  +N L+   C       S  + + M   G  P+  ++  L++G
Sbjct: 564 FGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQG 623

Query: 527 IAHQDELELSAEVLKELQLR 546
              ++  +  AE L +  LR
Sbjct: 624 YTGKNRFQ-KAEKLFDSMLR 642



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 201/439 (45%), Gaps = 5/439 (1%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           ++ +++ +  SG+         L     + G   Y +++  ++   G    T  YN+++ 
Sbjct: 178 SVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMD 237

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
            L    +L+ +     ++     VP+ FTY+ L+    +   V  A++L+  +   G  P
Sbjct: 238 ALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFP 297

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           N+ +Y +L+ G     R  EA +  + +  +   PN  +   L+  +      ++A ELL
Sbjct: 298 NVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELL 357

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            E     +  T +  + ++  L+ +     A+  L +  K  + PS++++N  +A  C  
Sbjct: 358 LEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLA--CVL 415

Query: 357 GKVDLVVKC--LDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            K+DL V C   D       KP   TY  L   L   GK++     +  L N    S   
Sbjct: 416 KKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIY 475

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  VI  LC+     +A ++  ++   G +P+  TY++LI G C  G +++A E+  ++
Sbjct: 476 SYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEML 535

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            E  ++PD+  FN+L+ GLC++ + + +   F  M+E    PN  TY IL+       ++
Sbjct: 536 LESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDV 595

Query: 534 ELSAEVLKELQLRQVVSES 552
             S  +L++++L  +  ++
Sbjct: 596 SRSTHLLRQMKLHGIQPDT 614



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 83/389 (21%), Positives = 149/389 (38%), Gaps = 47/389 (12%)

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           +LIQ  LV N       L     +R V  ++ LL  I   G K       +L     + G
Sbjct: 156 QLIQGVLVRN-------LHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLG 208

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
                +  F  +   G  P    YN ++ +L      + A     +M   +  P   TYN
Sbjct: 209 LANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYN 268

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           ILI  +   G  D AL+++ +M    + P+  +Y  +I    +  +     K L  M  R
Sbjct: 269 ILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKER 328

Query: 373 RCKPNEGTYNGLAMLCGVGKV---QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              PNE T   L    GV +     +AF ++     ++    Q     ++  L       
Sbjct: 329 NVVPNEATMRSLVH--GVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMAS 386

Query: 430 QAFQLLYEMTKYGFTPDSYTY----SSLIRGL-----------CMEGLIEEALEIFVVME 474
           +A   L +  K G+ P S T+    + +++ L           C++  ++     ++ + 
Sbjct: 387 EAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLI 446

Query: 475 EYDYKP--------------------DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
           E  YK                     ++ ++N ++  LCK +  D + E+F+ +  +G  
Sbjct: 447 EALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGIS 506

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
           PN  TY  L+ G      ++ + E+L+ L
Sbjct: 507 PNIVTYNTLIGGFCRNGNMDKAQELLEML 535



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 70/155 (45%)

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           +E    +  S  R G      ++  ++   G  P +  Y++++  L     ++ A   F 
Sbjct: 194 EELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQ 253

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M  ++  PD   +N L+ G+C+    D +L + + M   G  PN  TYTIL++G  +  
Sbjct: 254 QMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAK 313

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVMQYDFEGI 566
               + +VL+ ++ R VV   A  R ++   F  I
Sbjct: 314 RAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCI 348


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 219/440 (49%), Gaps = 5/440 (1%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM--EDYGYP 165
           L  A  +++AI +   + +    P A +Y  ++  L  +G      QL  +M  E + +P
Sbjct: 136 LGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFP 195

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            +TVTY++L+   C LG  + ++Q L+ + + G+ P    Y+ L+   +K    H A+ L
Sbjct: 196 -DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSL 254

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
            +++  +  +P++ +Y  L+ GL K GR +EA  FF ++  +G  P+ V  N ++  L  
Sbjct: 255 FEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGK 314

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSL-AYHGKTDHALKVLDEMVKGRFRPSAA 344
            GR ++A +L  EM+     P++VTYN +I +L     +        + M +    PS+ 
Sbjct: 315 AGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 374

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE-AFAIIQSL 403
           +Y+ +I   C   +++  +  L++M  +   P    Y  L    G  K  + A  + Q L
Sbjct: 375 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 434

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                SS    Y  +I  L + G+   A  +  EM K G  PD Y Y++L+ GL   G++
Sbjct: 435 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGML 494

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +EAL     M+E+   PD++++N +L GL K+     ++E+   M +    P+  +Y  +
Sbjct: 495 DEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTV 554

Query: 524 VEGIAHQDELELSAEVLKEL 543
           +  ++H    E +++++KE+
Sbjct: 555 LGALSHAGMFEEASKLMKEM 574



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 188/409 (45%), Gaps = 3/409 (0%)

Query: 89  MVSKGHK-PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           M ++GH  PD V  + L+   CK  +   AI+++  M   G+ P    YT L+    K  
Sbjct: 187 MSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFN 246

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +   A+ L E+M       +  TY  L+RGL   G ++++  F   + ++G  P+    +
Sbjct: 247 DAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMN 306

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGRTEEAIRFFRDLPS 266
            ++    K   +  AMKL  ++      P++V+YN ++  L + + R  E   +F  +  
Sbjct: 307 NMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKE 366

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P+  +Y+IL+   C   R E+A  LL EMD     P    Y  LI +L    + D 
Sbjct: 367 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 426

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-A 385
           A ++  E+ +     SA  Y  +I  L   G++D  +   D+M    C P+   YN L +
Sbjct: 427 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMS 486

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            L   G + EA + ++ +           Y  ++  L + G  ++A ++L  M +    P
Sbjct: 487 GLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP 546

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           D  +Y++++  L   G+ EEA ++   M    ++ D+  ++++L  + K
Sbjct: 547 DVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 177/384 (46%), Gaps = 6/384 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + + A   L  M   G +P     T L+    K N    A+ + E M      PD  +YT
Sbjct: 212 RRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 271

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  L K G +  A     +M+  G   +TV  N+++  L   G L+ +++    +   
Sbjct: 272 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 331

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAM-KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             +P+  TY+ +++A ++ +   + +    + +   G  P+  +Y++L+ G CK  R E+
Sbjct: 332 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEK 391

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+    ++  KGF P   +Y  L+ +L    R++ A EL  E+     S +   Y ++I 
Sbjct: 392 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 451

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G+ D A+ + DEM K    P   +YN +++ L   G +D  +  + +M    C P
Sbjct: 452 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 511

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE---FYKYVITSLCRKGKTYQAFQ 433
           +  +YN   +L G+ K       ++ L N + S+ +     Y  V+ +L   G   +A +
Sbjct: 512 DINSYN--IILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASK 569

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGL 457
           L+ EM   GF  D  TYSS++  +
Sbjct: 570 LMKEMNTLGFEYDLITYSSILEAI 593



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 192/459 (41%), Gaps = 45/459 (9%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN---LNQSL 188
           D S+Y  L++CL      G   +++++M     P   VT   L   + MLGN   + Q++
Sbjct: 89  DTSTYMALIHCLEVVEQYGEMWKMIQEM--VRNPICVVTPTELSDVVRMLGNAKMVRQAI 146

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTG 247
               ++  +   P A  Y+ ++     E       +L +++  +G   P+ V+Y+ L++ 
Sbjct: 147 TIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISA 206

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK GR + AI+   ++   G +P    Y +L+           A  L  EM      P 
Sbjct: 207 FCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPD 266

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + TY  LI  L   G+ D A     EM +   RP     N +I  L   G++D  +K   
Sbjct: 267 VFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQ 326

Query: 368 QMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR 424
           +M   RC P+  TYN +  A+     +  E  +  + +  +   SP  F Y  +I   C+
Sbjct: 327 EMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERM-KESGISPSSFTYSILIDGFCK 385

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLI------------------------------ 454
             +  +A  LL EM + GF P    Y SLI                              
Sbjct: 386 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 445

Query: 455 -----RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
                + L   G +++A+ +F  M +    PDV  +NAL+ GL ++   D +L   + M 
Sbjct: 446 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 505

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           E G +P+  +Y I++ G+A       + E+L  ++   V
Sbjct: 506 EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTV 544



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 153/321 (47%), Gaps = 3/321 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A+     M  +G +PD V   N++  L KA ++  A+K+ + M +   IP   +Y 
Sbjct: 282 RIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYN 341

Query: 138 YLVNCLCK-KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            ++  L + K          E+M++ G   ++ TY+ L+ G C    + +++  L+ + +
Sbjct: 342 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 401

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG  P    Y  L++A  K +    A +L  ++    G  +   Y V++  L K GR ++
Sbjct: 402 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 461

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           AI  F ++   G  P+V +YN L+  L   G  +EA   +  M      P I +YNI++ 
Sbjct: 462 AINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 521

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            LA  G    A+++L  M +   RP   SYN ++  L   G  +   K + +M     + 
Sbjct: 522 GLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEY 581

Query: 377 NEGTYNGLAMLCGVGKVQEAF 397
           +  TY+  ++L  +GKV   +
Sbjct: 582 DLITYS--SILEAIGKVDHEY 600


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 202/405 (49%), Gaps = 8/405 (1%)

Query: 133 ASSYTY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           ASS TY  L+   C   ++  A  L+ +M+  G   N  T + +++GLC  G + Q+L+ 
Sbjct: 23  ASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEH 82

Query: 191 LDRLIQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGL 248
            D  ++     P+  +Y+ L+    K   V AA  L   ++A GG +PN  +YN L+ GL
Sbjct: 83  FDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGL 142

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           CK+ R + A     +   + F P+VV+YN L+ +L   GR +EA     +M      PT+
Sbjct: 143 CKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTL 202

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           V++N +I  L    +   AL+V +EM+   F P+  +Y+ +I  LC   ++D   + LD+
Sbjct: 203 VSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDR 262

Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M    C+P+   Y  L +     G++  A  +++ + ++        Y  VI  LC+ G+
Sbjct: 263 MVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGR 322

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              A ++  E+     +P+  TYS+LI G C    ++E  +   VM E   +P+V  +N 
Sbjct: 323 VDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGK---VMREMACRPNVVTYNT 379

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           ++ GL    R + +  +F+ M E G +P+  TY  L   +   D+
Sbjct: 380 MIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQ 424



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 190/384 (49%), Gaps = 6/384 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS-SGIIPDASSYT 137
           L+ AF  L  M  +G + +    + +L  LC+  ++ +A++  +  +  +   PD  SYT
Sbjct: 41  LDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYT 100

Query: 138 YLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            L+N LCK G V  A  L  KM    G   N  TYN+LV GLC    L+ +   +    +
Sbjct: 101 TLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARK 160

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +   P+  TY+ L+ A ++   V  A+     +  +G  P LVS+N ++TGLC+  R  +
Sbjct: 161 RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLAD 220

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+  F ++  + F PN+V+Y++++  LC   + +EA +LL  M      P +V Y  L+ 
Sbjct: 221 ALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVL 280

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             +  G+ D AL +L  MV     P   +Y  +I +LC  G+VD   +   ++   +C P
Sbjct: 281 GFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSP 340

Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TY+ L    C   +V E   +++ +  + N      Y  +I  L    +  +A+ + 
Sbjct: 341 NVVTYSALIGGYCRASRVDEGGKVMREMACRPNVVT---YNTMIWGLSMVDRNEEAYGMF 397

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCM 459
            EM++ GF PD+ TY  L R L M
Sbjct: 398 REMSECGFVPDARTYRGLKRALRM 421



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 196/388 (50%), Gaps = 6/388 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+   C A+ +  A  ++  M   G+  +  + + ++  LC+ G V  A++  +   +  
Sbjct: 31  LIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELA 90

Query: 164 YPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK-GLVPNAFTYSFLLEAAYKERGVHA 221
           +   + V+Y +L+ GLC LG ++ +     +++   G  PNAFTY+ L++   K+  + A
Sbjct: 91  HAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDA 150

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A  ++ +   +   P++V+YN L+  L + GR +EA+  F  +  +G+ P +VS+N ++ 
Sbjct: 151 ARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIIT 210

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC   R  +A E+  EM   D  P +VTY+++I  L    + D A ++LD MV    RP
Sbjct: 211 GLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRP 270

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAII 400
              +Y P++    + G++D  +  L +M  + C P+  TY   +  LC VG+V +A  I 
Sbjct: 271 DLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIF 330

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + L   + S     Y  +I   CR  +  +  +++ EM      P+  TY+++I GL M 
Sbjct: 331 RELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMV 387

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNAL 488
              EEA  +F  M E  + PD   +  L
Sbjct: 388 DRNEEAYGMFREMSECGFVPDARTYRGL 415



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 199/404 (49%), Gaps = 7/404 (1%)

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           + + G+   A+QL  +      P ++VTYN L+RG C   +L+ +   L  +  +G+  N
Sbjct: 1   MVRAGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKG-GKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
             T S +L+   +   V  A++  D  +     +P++VSY  L+ GLCK GR + A   F
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 262 RDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           R +  + G  PN  +YN L+  LC + R + A  ++ E    D +P +VTYN L+ +L  
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            G+ D AL    +M +  + P+  S+N II  LC   ++   ++  ++M  R   PN  T
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239

Query: 381 YN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y+  +  LC   ++ EA  ++  + ++        Y  ++      G+   A  LL  M 
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
             G  PD  TY+ +I  LC  G +++A EIF  +      P+V  ++AL+ G C++ R D
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 359

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              E  ++M E    PN  TY  ++ G++  D  E +  + +E+
Sbjct: 360 ---EGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREM 400



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 156/308 (50%), Gaps = 4/308 (1%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++ AF    +MV+ G  +P+      L+  LCK +++  A  V+         PD  +Y
Sbjct: 111 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTY 170

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+  L + G V  A+    +M + GY    V++N+++ GLC    L  +L+  + +I 
Sbjct: 171 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 230

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +   PN  TYS +++   K   +  A +LLD ++++G +P+LV+Y  L+ G    GR + 
Sbjct: 231 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 290

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+   R + S+G  P+VV+Y +++  LC  GR ++A+E+  E+     SP +VTY+ LIG
Sbjct: 291 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 350

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D   KV+ EM     RP+  +YN +I  L    + +       +M      P
Sbjct: 351 GYCRASRVDEGGKVMREMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 407

Query: 377 NEGTYNGL 384
           +  TY GL
Sbjct: 408 DARTYRGL 415



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 129/251 (51%), Gaps = 3/251 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A     +M  +G+ P +V    ++  LC+A ++  A++V   M+     P+  +Y+
Sbjct: 182 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 241

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   +  A QL+++M   G   + V Y  LV G    G L+ +L  L R++ +
Sbjct: 242 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 301

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+  TY+ +++   K   V  A ++  +++A    PN+V+Y+ L+ G C+  R +E 
Sbjct: 302 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG 361

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +  R++  +   PNVV+YN ++  L M  R EEA  +  EM      P   TY  L  +
Sbjct: 362 GKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRA 418

Query: 318 LAYHGKTDHAL 328
           L    +  H L
Sbjct: 419 LRMIDQPPHVL 429



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 3/211 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L DA      M+ +   P++V  + ++  LCK++++ +A ++++ MVS G  PD  
Sbjct: 214 RARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLV 273

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT LV      G +  A+ L+ +M   G   + VTY  ++  LC +G ++ + +    L
Sbjct: 274 AYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFREL 333

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +     PN  TYS L+    +   V    K++ ++     +PN+V+YN ++ GL    R 
Sbjct: 334 VANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMAC---RPNVVTYNTMIWGLSMVDRN 390

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           EEA   FR++   GF P+  +Y  L R+L M
Sbjct: 391 EEAYGMFREMSECGFVPDARTYRGLKRALRM 421



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 2/152 (1%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-VVM 473
           Y  +I   C       AF LL EM   G   +  T S +++GLC  G + +ALE F   +
Sbjct: 28  YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL 87

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDE 532
           E    +PDV ++  L+ GLCK  R D + ++F+ M+  G   PN  TY  LV+G+  QD 
Sbjct: 88  ELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 147

Query: 533 LELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           L+ +  V+ E + R    +      +M   F+
Sbjct: 148 LDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 220/451 (48%), Gaps = 29/451 (6%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RMV+ G  P+      L++ LCK      A+K+ + M+S GI P+  ++T L++ +C  G
Sbjct: 201 RMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAG 260

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG-LVPNAFTY 206
            +  A  L+  MED G P + VTYN+ + GLC  G ++++++ L+ L   G  V     Y
Sbjct: 261 QLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGY 320

Query: 207 SFLLE----AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           S L++    A   E G    M++L+        P++V Y +++ G  + GRT +A  FF 
Sbjct: 321 SCLIDGLFLAGRYEEGFQCYMEVLEQ---ADVSPDIVLYTIMIRGCAEAGRTNDAFAFFD 377

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++  KGF P+   YN LL++LC  G  + A  L++EM   +    I TY  +I  L    
Sbjct: 378 EMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQ 437

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             D A++V D MV+    PS  +YN +I  L    +++       +M   + +       
Sbjct: 438 LVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEA-----RMLFYKMEVGNNPSL 492

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L +  G  +V+++                E  + ++ S+C+ G+  +A++LL  +   G
Sbjct: 493 FLRLTLGANQVRDS----------------ETLQKLVESMCQSGQVLKAYKLLRGIIDSG 536

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD  TY++L+ GLC    ++ AL +F  ++   +  D   +  L+  L ++ R + +L
Sbjct: 537 VVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDAL 596

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            +FQ ++  G  P+   Y  ++  +    +L
Sbjct: 597 TLFQDILHSGGTPSMPIYNSMMRSLCRMQKL 627



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 212/473 (44%), Gaps = 24/473 (5%)

Query: 91  SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGN- 148
           + G +P       L++    A +  +A++    M    G  P    Y  ++  L   G  
Sbjct: 132 AAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGA 191

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A+ L  +M   G   N  TYN L+ GLC  G    +L+  D +I +G+ PN  T++ 
Sbjct: 192 VPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTI 251

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           LL +      +  A  LL  +  KG  P+ V+YN  L+GLCK GR +EAI     L   G
Sbjct: 252 LLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTG 311

Query: 269 -FEPNVVSYNILLRSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            F   +  Y+ L+  L + GR+EE  +   E ++  D SP IV Y I+I   A  G+T+ 
Sbjct: 312 TFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTND 371

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A    DEM +  F P    YN ++  LC  G +D     + +M       +  TY  + +
Sbjct: 372 AFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMII 431

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC    V EA  +   +           Y  +I  L R  +  +A  L Y+M + G  P
Sbjct: 432 GLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNP 490

Query: 446 --------------DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
                         DS T   L+  +C  G + +A ++   + +    PDV  +N LL G
Sbjct: 491 SLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNG 550

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI--AHQ--DELELSAEVL 540
           LCK R  D +L +F+ +  KG   +E TY  L++ +  AH+  D L L  ++L
Sbjct: 551 LCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDIL 603



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 209/486 (43%), Gaps = 56/486 (11%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA    + M+S+G  P+V   T LL  +C A ++K+A  ++  M   G  PD  +Y   +
Sbjct: 229 DALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFL 288

Query: 141 NCLCKKGNVGYAMQLVEKMEDYG------------------------------------- 163
           + LCK G V  A++ +E +   G                                     
Sbjct: 289 SGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQAD 348

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              + V Y  ++RG    G  N +  F D + +KG  P+ F Y+ LL+A      +  A 
Sbjct: 349 VSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGAR 408

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            L+ +++      ++ +Y  ++ GLCKE   +EA++ F  +   G  P+V++YN+L+  L
Sbjct: 409 SLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGL 468

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIV--------------TYNILIGSLAYHGKTDHALK 329
               R EEA  L  +M+ G+ +P++               T   L+ S+   G+   A K
Sbjct: 469 YRAHRLEEARMLFYKMEVGN-NPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYK 527

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLC 388
           +L  ++     P   +YN ++  LC    +D  ++   ++  +    +E TY  L   L 
Sbjct: 528 LLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLL 587

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM--TKYGFTPD 446
              +  +A  + Q + +   +     Y  ++ SLCR  K  QA  L ++    KY     
Sbjct: 588 RAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQ 647

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
               SS  R    EG + EA+   + +++     +   +   L+GL ++ R + +L++F 
Sbjct: 648 DEVISS-ARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFH 706

Query: 507 MMIEKG 512
           ++ E G
Sbjct: 707 ILEESG 712



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 190/448 (42%), Gaps = 22/448 (4%)

Query: 49  QVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL 108
           Q  +SP   +YT   R       T       NDAF   + M  KG  PD      LL  L
Sbjct: 346 QADVSPDIVLYTIMIRGCAEAGRT-------NDAFAFFDEMKEKGFTPDTFCYNTLLKAL 398

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
           C A  +  A  +M  MV + ++ D  +YT ++  LCK+  V  AMQ+ + M + G   + 
Sbjct: 399 CDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSV 458

Query: 169 VTYNSLVRGLCMLGNL-------------NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +TYN L+ GL     L             N    FL   +    V ++ T   L+E+  +
Sbjct: 459 MTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQ 518

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              V  A KLL  II  G  P++V+YN LL GLCK    + A+R FR+L  KGF  + ++
Sbjct: 519 SGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEIT 578

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+ SL    R+ +A  L  ++     +P++  YN ++ SL    K   A+ +  + +
Sbjct: 579 YGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHL 638

Query: 336 KGRFRPSAASYNPIIARL-CSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKV 393
             ++   A       AR    EG +   V+ L ++       N   Y   L  L   G++
Sbjct: 639 PRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRI 698

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           ++A  I   L             ++   LC +G    A  ++    K GFT   Y  + L
Sbjct: 699 EDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRL 758

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           +  LC+    ++A  +   M    Y  D
Sbjct: 759 LCSLCIHHRRKDAQALAWRMHLVGYDMD 786



 Score = 39.3 bits (90), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 21/226 (9%)

Query: 40  GFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVV 99
           G +R+    QV   P D +        G   D+  R H+ NDA    + ++  G  P + 
Sbjct: 559 GALRLFRELQVKGFPLDEITY------GTLIDSLLRAHRYNDALTLFQDILHSGGTPSMP 612

Query: 100 QATNLLYDLCKANKMKKAIKVM--------EMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
              +++  LC+  K+ +AI +          ++    +I  A    +   CL +      
Sbjct: 613 IYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARK-KFEEGCLHEA----- 666

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
             +L++  ++YG   N+  Y   + GL   G +  +L+    L + G+         L +
Sbjct: 667 VRELIKIDQEYG-SVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSK 725

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
               E  + AA+ ++   + KG        N LL  LC   R ++A
Sbjct: 726 YLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRKDA 771


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 227/467 (48%), Gaps = 16/467 (3%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +A K++ A++V+ +M  +G+ P  S     +  L K G +  A++ +E+M+  G   + V
Sbjct: 247 RAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIV 306

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TYNSL++G C L  +  +L+ +  L  KG  P+  +Y  ++    KE+ +     L++ +
Sbjct: 307 TYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKM 366

Query: 230 IAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +      P+ V+YN L+  L K G  ++A+ F ++   KGF  + V Y+ ++ S C +GR
Sbjct: 367 VWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGR 426

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            +EA  L+ +M     +P +VTY  ++      G+ D A K+L +M K   +P+  SY  
Sbjct: 427 MDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTA 486

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGN 405
           ++  LC  GK     + ++        PN  TY   A++ G+   GK+ EA  + + +  
Sbjct: 487 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYG--AVMHGLRREGKLSEACDLTREMVE 544

Query: 406 KQ-NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           K    +P E    +I SLC+  K  +A + L E    G   +   ++++I G C  G +E
Sbjct: 545 KGFFPTPVEI-NLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDME 603

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            AL +   M      PD   + AL   L K  R D + E+   M+ KG  P   TY  ++
Sbjct: 604 AALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVI 663

Query: 525 EGIAH----QDELELSAEVLKELQLRQVVSESAVERLVMQYDFEGIE 567
              +      D L L  ++LK    R V ++  +E+L    DF  +E
Sbjct: 664 HRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQ-VIEKLC---DFGNLE 706



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 232/497 (46%), Gaps = 5/497 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL +A   L  M   G +P +      +Y L K  K++KA+K +E M  +GI PD  
Sbjct: 247 RAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIV 306

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   C    +  A++L+  +   G P + V+Y +++  LC    + +    ++++
Sbjct: 307 TYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKM 366

Query: 195 I-QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +    L+P+  TY+ L+    K      A+  L +   KG   + V Y+ ++   C++GR
Sbjct: 367 VWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGR 426

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EA     D+ S+G  P+VV+Y  ++   C  GR +EA ++L +M      P  V+Y  
Sbjct: 427 MDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTA 486

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+  L + GK+  A ++++   +  + P+A +Y  ++  L  EGK+        +M  + 
Sbjct: 487 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKG 546

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             P     N L   LC   KV EA   ++   NK  +     +  VI   C+ G    A 
Sbjct: 547 FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAAL 606

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            +L +M   G  PD+ TY++L   L  +G ++EA E+ V M      P    + +++   
Sbjct: 607 SVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRY 666

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL-KELQLRQVVSE 551
            +  R D  L + + M+++   P  T Y  ++E +     LE + ++L K L+    V  
Sbjct: 667 SQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDA 724

Query: 552 SAVERLVMQYDFEGIEV 568
           +    L+  Y  +G+ +
Sbjct: 725 NTCHVLMESYLKKGVAI 741



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 189/388 (48%), Gaps = 3/388 (0%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           +DA   L+    KG   D V  + +++  C+  +M +A  ++  M S G  PD  +YT +
Sbjct: 393 DDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAI 452

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           V+  C+ G +  A +++++M  +G   NTV+Y +L+ GLC  G   ++ + ++   +   
Sbjct: 453 VDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWW 512

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PNA TY  ++    +E  +  A  L  +++ KG  P  V  N+L+  LC+  +  EA +
Sbjct: 513 TPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKK 572

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
           +  +  +KG   NVV++  ++   C  G  E A  +L +M    + P  VTY  L  +L 
Sbjct: 573 YLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALG 632

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G+ D A +++ +M+     P+  +Y  +I R    G+VD ++  L++M  R  +P   
Sbjct: 633 KKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRT 690

Query: 380 TYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            YN  +  LC  G ++EA  ++  +    +         ++ S  +KG    A+++   M
Sbjct: 691 VYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRM 750

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
            +   TPD      + + L ++G + EA
Sbjct: 751 FRRNLTPDLKLCEKVSKKLVLDGKLVEA 778



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 214/464 (46%), Gaps = 6/464 (1%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F   +R     H P VV  T +L  L K    + A +V+ +M   GI     ++ Y++  
Sbjct: 187 FYWADRQWRYSHHP-VVYYT-MLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVS 244

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             + G +  A++++  M+  G   +    N+ +  L   G L ++L+FL+R+   G+ P+
Sbjct: 245 YSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPD 304

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L++       +  A++L+  + +KG  P+ VSY  ++  LCKE + EE      
Sbjct: 305 IVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLME 364

Query: 263 DL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            +  +    P+ V+YN L+  L   G  ++A   L E          V Y+ ++ S    
Sbjct: 365 KMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQK 424

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G+ D A  ++ +M      P   +Y  I+   C  G++D   K L QM+   CKPN  +Y
Sbjct: 425 GRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSY 484

Query: 382 NGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMT 439
             L   LC  GK  EA  +I ++  +   +P    Y  V+  L R+GK  +A  L  EM 
Sbjct: 485 TALLNGLCHSGKSLEAREMI-NVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMV 543

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           + GF P     + LI+ LC    + EA +            +V NF  ++ G C+    +
Sbjct: 544 EKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDME 603

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +L V   M   G+ P+  TYT L + +  +  L+ +AE++ ++
Sbjct: 604 AALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKM 647



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 110/222 (49%), Gaps = 2/222 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ +A   LE  ++KG   +VV  T +++  C+   M+ A+ V++ M  SG  PDA 
Sbjct: 563 QNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAV 622

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L + L KKG +  A +L+ KM   G     VTY S++      G ++  L  L+++
Sbjct: 623 TYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKM 682

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++   P    Y+ ++E       +  A KLL  ++    K +  + +VL+    K+G  
Sbjct: 683 LKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVA 740

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
             A +    +  +   P++     + + L ++G+  EA+ L+
Sbjct: 741 ISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLM 782


>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
          Length = 375

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 183/367 (49%), Gaps = 35/367 (9%)

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
           A+G +PN V+YNV++  +C+EG  ++A      LPS+  +PN V+YN +L+  C   RW 
Sbjct: 3   AEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWV 62

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           +ANE+L E+   +  P   T N+ I +L   G      + L++M K     +  +YN II
Sbjct: 63  DANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAII 122

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNS 409
             LC +G VD  ++ L  M    CKP+  TYN  L  LC   + ++A  ++  +      
Sbjct: 123 GGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 182

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                +  +I+  C+KG   QA ++  +M + G  P+S TYS++I GL     +E+ALE+
Sbjct: 183 RDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALEL 242

Query: 470 FVVM----------------------------------EEYDYKPDVDNFNALLLGLCKS 495
              M                                  ++    P    +N +LLGLC++
Sbjct: 243 LNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRN 302

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            +T+ +++V   M+  G MP+E+TY IL+EG+ ++  L+ + E+L  L  R V+S S ++
Sbjct: 303 GKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSRLCSRDVLSNSLIK 362

Query: 556 RLVMQYD 562
              +  D
Sbjct: 363 NEALLLD 369



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 176/347 (50%)

Query: 124 MVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN 183
           M + G  P+  +Y  +++ +C++G+V  A +L+  +       NTV YN++++G C +  
Sbjct: 1   MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
              + + LD ++ +   PN  T +  +    ++  +    + L+ +   G   N+V+YN 
Sbjct: 61  WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNA 120

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           ++ GLC++G  + A+    ++ S G +P++V+YN +L+ LC   RWE+A EL+ +M   D
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 180

Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
           R     T+N +I      G    AL+V  +M +    P++ +Y+ II  L    K++  +
Sbjct: 181 RLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQAL 240

Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
           + L++M ++    ++        L    K++E   ++  L +   S     Y  V+  LC
Sbjct: 241 ELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLC 300

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
           R GKT  A  +L +M   G  PD  TY  LI GL  EG ++EA E+ 
Sbjct: 301 RNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEARELL 347



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 1/311 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+  ++ A   L  + S+  KP+ V    +L   C   +   A ++++ +VS    
Sbjct: 18  DAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDANEILDEVVSENCP 77

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+ ++    +N LC+KG +    + +EKM  +G  TN VTYN+++ GLC  GN++ +L+ 
Sbjct: 78  PNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLCEQGNVDSALEL 137

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  +   G  P+  TY+ +L+          A +L+  +       +  ++N +++  C+
Sbjct: 138 LSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDNSTFNTIISFWCQ 197

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +G   +A+  F+ +P KG  PN  +Y+ ++  L    + E+A ELL EM       T   
Sbjct: 198 KGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNEM-ANKGFNTDKM 256

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y +L  SL    K +  ++V+ ++      P    YN ++  LC  GK +  +  L  M 
Sbjct: 257 YLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMV 316

Query: 371 HRRCKPNEGTY 381
              C P+E TY
Sbjct: 317 SCGCMPDESTY 327



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 146/277 (52%), Gaps = 1/277 (0%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA   L+ +VS+   P+       +  LC+   ++K  + +E M   G   +  +Y  ++
Sbjct: 63  DANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAII 122

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
             LC++GNV  A++L+  M+ +G   + VTYN++++GLC       + + + ++ Q   +
Sbjct: 123 GGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 182

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            +  T++ ++    ++  +  A+++   +  KG  PN  +Y+ ++ GL K  + E+A+  
Sbjct: 183 RDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALEL 242

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
             ++ +KGF  + + Y +L +SL  E + EE  +++ ++     SP  V YN ++  L  
Sbjct: 243 LNEMANKGFNTDKM-YLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCR 301

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
           +GKT++A+ VL +MV     P  ++Y  +I  L  EG
Sbjct: 302 NGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEG 338



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 48/97 (49%)

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  P++ TY+ +I  +C EG +++A E+   +     KP+  N+N +L G C   R
Sbjct: 1   MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
              + E+   ++ +   PNE T  + +  +  +  L+
Sbjct: 61  WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQ 97



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 7/116 (6%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           +++ K+ +    + ++   G  P  V    +L  LC+  K   AI V+  MVS G +PD 
Sbjct: 265 NKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDE 324

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           S+Y  L+  L  +G +  A +L+ ++      +  V  NSL++   +L  L+Q+++
Sbjct: 325 STYIILIEGLFYEGYLKEARELLSRL-----CSRDVLSNSLIKNEALL--LDQNIR 373


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 214/439 (48%), Gaps = 3/439 (0%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY-PT 166
           L  A  + KAI +   + +    P A +Y  ++  L  +G      +L  +M + G+   
Sbjct: 169 LGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQP 228

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +TVTY++L+   C LG  + +++ L+ + + G+ P A  Y+ ++   +K   VH A+ L 
Sbjct: 229 DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLF 288

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           +++     +P++ +Y  L+ GL K GR +EA  F+ ++  +G +P+ V  N ++  L   
Sbjct: 289 EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKA 348

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSL-AYHGKTDHALKVLDEMVKGRFRPSAAS 345
           GR ++  +L  EM      P +VTYN +I +L     +        + M      PS  +
Sbjct: 349 GRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFT 408

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE-AFAIIQSLG 404
           Y+ +I   C   +++  +  L++M  +   P    Y  L    G  K  + A  + Q L 
Sbjct: 409 YSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
               SS    Y  +I  L + G+   A  L  EM+K G TP+ Y Y++L+ GL    +++
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLD 528

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EAL     M+E+   PD++++N +L GL K+     ++E+   M      P+  +Y  ++
Sbjct: 529 EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVL 588

Query: 525 EGIAHQDELELSAEVLKEL 543
             ++H    E +AE++KE+
Sbjct: 589 SALSHAGMFEEAAELMKEM 607



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 192/412 (46%), Gaps = 9/412 (2%)

Query: 89  MVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           M ++GH +PD V  + L+   CK  +   AI+++  M  +G+ P A  YT +++   K  
Sbjct: 220 MSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLD 279

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           NV  A+ L E+M       +  TY  L+RGL   G ++++  F   + ++G  P+    +
Sbjct: 280 NVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMN 339

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGRTEEAIRFFRDLPS 266
            ++    K   +   +KL +++      PN+V+YN ++  L + + R  E   +F  +  
Sbjct: 340 NMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKG 399

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P+  +Y+IL+   C   R E+A  LL EMD     P    Y  LI +L    + D 
Sbjct: 400 SGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN---- 382
           A ++  E+ +     SA  Y  +I  L   G++D  +   D+M    C PN   YN    
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMS 519

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           GLA  C    + EA   ++ +           Y  ++  L + G  ++A ++L  M    
Sbjct: 520 GLARAC---MLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNST 576

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             PD+ +Y++++  L   G+ EEA E+   M    ++ D+  ++++L  + K
Sbjct: 577 IKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 194/455 (42%), Gaps = 45/455 (9%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN---LNQSL 188
           D S+Y  L++CL      G   +++++M     P   VT   L + + MLGN   + +++
Sbjct: 122 DTSTYMALIHCLELVEQYGEMWKMIQEM--VRSPICVVTPMELSQVIRMLGNAKMIGKAI 179

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTG 247
               ++  +   P A  Y+ ++     E       +L +++  +G  +P+ V+Y+ L++ 
Sbjct: 180 TIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISA 239

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK GR + AIR   ++   G +P    Y +++           A  L  EM      P 
Sbjct: 240 FCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPD 299

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + TY  LI  L   G+ D A     EM +   +P     N +I  L   G++D  +K  +
Sbjct: 300 VFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFE 359

Query: 368 QMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR 424
           +M    C PN  TYN +  A+     +V E F+  + +      SP  F Y  +I   C+
Sbjct: 360 EMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKG-SGISPSPFTYSILIDGFCK 418

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLI------------------------------ 454
             +  +A  LL EM + GF P    Y SLI                              
Sbjct: 419 TNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 478

Query: 455 -----RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
                + L   G +++A+ +F  M +    P+V  +NAL+ GL ++   D +L   + M 
Sbjct: 479 YAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQ 538

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           E G +P+  +Y I++ G+A       + E+L  ++
Sbjct: 539 EHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK 573



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 3/319 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A+     M  +G KPD V   N++  L KA ++   +K+ E M  S  IP+  +Y 
Sbjct: 315 RIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYN 374

Query: 138 YLVNCLCK-KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            ++  L + K  V       E+M+  G   +  TY+ L+ G C    + +++  L+ + +
Sbjct: 375 TIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE 434

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG  P    Y  L++A  K +    A +L  ++    G  +   Y V++  L K GR ++
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 494

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           AI  F ++   G  PNV +YN L+  L      +EA   + +M      P I +YNI++ 
Sbjct: 495 AINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILN 554

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            LA  G    A+++L  M     +P A SYN +++ L   G  +   + + +M     + 
Sbjct: 555 GLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEY 614

Query: 377 NEGTYNGLAMLCGVGKVQE 395
           +  TY+  ++L  +GKV +
Sbjct: 615 DLITYS--SILEAIGKVDQ 631


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 232/483 (48%), Gaps = 16/483 (3%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A     RM      P        LY L K  K   + K    MV +GI     +Y  
Sbjct: 198 LEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNI 257

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++  +CK+G++  A  L  +M+  G   + VTYNSL+ G   LG L++S    + +   G
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  TY+ L+    K   +  A   L ++   G KPN+V+Y+ L+  LCKE   ++AI
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAI 377

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
           +F  D+   G  PN  +Y  L+ + C  G   +A +L  EM        +VTY  L+  L
Sbjct: 378 KFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGL 437

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+   A  +   M+K    P+  +Y  ++       +V+  ++ L ++  ++ KP+ 
Sbjct: 438 CKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDL 497

Query: 379 GTYNGLAM-LCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
             Y  +   LC   K++E     + +++ G + NS     Y   + +  + GKT +A  L
Sbjct: 498 LLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSV---IYTIRMDAYFKTGKTVEALNL 554

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP-DVDNFNALLLGLC 493
           L EM   G      T+  LI GLC +GL+EEA++ F  M +++ +P +V    AL+ GLC
Sbjct: 555 LQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLC 614

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG-IAHQDELELSAEVLKELQLRQVVSES 552
           K+   + + ++F  M +K  +P++  YT L++G + H+D  E        L +R  +SE 
Sbjct: 615 KNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQE-------ALNIRSRMSEL 667

Query: 553 AVE 555
            +E
Sbjct: 668 GME 670



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 218/476 (45%), Gaps = 11/476 (2%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F Q+++M   G  PD+V   +L+    K   + ++  + E M   G  PD  +Y  L+NC
Sbjct: 275 FHQMKQM---GLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINC 331

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            CK   +  A   + +M++ G   N VTY++L+  LC    L Q+++FL  + + GL PN
Sbjct: 332 FCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPN 391

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            FTY+ L++A  K   +  A+KL D+++      N+V+Y  LL GLCKEGR  EA   FR
Sbjct: 392 EFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFR 451

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +   G  PN+ +Y  L+       R E A ELL E+      P ++ Y  +I  L    
Sbjct: 452 AMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQN 511

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K +    V+ EM     R ++  Y   +      GK    +  L +M     +    T+ 
Sbjct: 512 KLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFC 571

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY--KYVITSLCRKGKTYQAFQLLYEMT 439
            L   LC  G V+EA      + +  N  P        +I  LC+      A +L  EM 
Sbjct: 572 VLIDGLCKKGLVEEAIDYFARMADF-NLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQ 630

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
                PD   Y++LI G       +EAL I   M E   + D+  + +L+ GL +     
Sbjct: 631 DKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQ 690

Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEG---IAHQDE-LELSAEVLKELQLRQVVSE 551
            +      MI KG +P+E     L+     +   DE +EL  E+LK++ L +++ E
Sbjct: 691 QARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKKVPLDELLEE 746



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 159/412 (38%), Gaps = 66/412 (16%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H L  A   L  M   G  P+    T+L+   CKA  +  A+K+ + M+   + 
Sbjct: 365 DALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVG 424

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR-------------- 176
            +  +YT L++ LCK+G +  A  L   M   G   N  TY +LV               
Sbjct: 425 FNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALEL 484

Query: 177 ---------------------GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
                                GLC    L +    +  +   G+  N+  Y+  ++A +K
Sbjct: 485 LKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFK 544

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                 A+ LL ++   G +  +V++ VL+ GLCK+G  EEAI +F  +     +PN V+
Sbjct: 545 TGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVA 604

Query: 276 Y-NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
               L+  LC     E A +L  EM   +  P  + Y  LI     H     AL +   M
Sbjct: 605 VCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRM 664

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC------ 388
            +        +Y  ++  L     V      L++M  +   P+E       +LC      
Sbjct: 665 SELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDE-------ILCIRLLRK 717

Query: 389 --GVGKVQEAFAI---------IQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
              +G + EA  +         +  L  +QN  P++  +      CR G  Y
Sbjct: 718 YYELGSIDEAIELHDELLKKVPLDELLEEQNLMPEKILR------CRDGDGY 763



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 2/131 (1%)

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
           F K +I+S  R    +  F++L+  T+    P    + +L       G++EEA + F  M
Sbjct: 151 FLKELISSR-RILPGFDVFEVLWS-TRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRM 208

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
             +   P   + NA L  L K+ + DLS + F+ M+  G   +  TY I++  +  + ++
Sbjct: 209 TRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDM 268

Query: 534 ELSAEVLKELQ 544
             +  +  +++
Sbjct: 269 VTAKSLFHQMK 279


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/544 (25%), Positives = 253/544 (46%), Gaps = 72/544 (13%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +AF    ++V +G   D+V  T L+  L K++K K+A  +   +    +IP++ +YT L+
Sbjct: 326 EAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALI 385

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           +  CK G++     L+++ME+     N +TY+S++ G    G L++++  + +++ + ++
Sbjct: 386 DGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNII 445

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PNA+ Y+ L++   K      A  L +++   G K N V ++VL+  L +  R +EA   
Sbjct: 446 PNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEEL 505

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            +D+ S+G   + V+Y  L+      G+   A  ++ EM        +VTYN+LI  L  
Sbjct: 506 LKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLE 565

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
           HGK + A  V   M++    P+ A+YN +I   C +G++D  ++  ++M   +  P+  T
Sbjct: 566 HGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSIT 624

Query: 381 YNGLAM-LCGVGKVQEAFAIIQSLG---------------NKQNSSP------------- 411
            N L + L   G++++A  ++  +                N  + S              
Sbjct: 625 CNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLV 684

Query: 412 -------QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
                  QE Y  +I   CR   T +A  +L  M + GF  D+ TY++LIRG C    ++
Sbjct: 685 DMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVK 744

Query: 465 EAL-----------------------------------EIFVVMEEYDYKPDVDNFNALL 489
           +AL                                   E+F  M+E    PD   ++ L+
Sbjct: 745 KALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLI 804

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            G  K      S+ ++  M+ +G +P  +TY +L+   A   +++ + E+L E+Q+R V 
Sbjct: 805 SGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVP 864

Query: 550 SESA 553
             S+
Sbjct: 865 PSSS 868



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 229/531 (43%), Gaps = 58/531 (10%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +N AF  L  MV K    D +    L+   C+    K   ++M+ +VS G   D   +  
Sbjct: 93  VNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNT 152

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL------- 191
           L++  CK G +  A+ LVE+M   G  ++ V+YN+L+ G C  G  +++   L       
Sbjct: 153 LIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESR 212

Query: 192 ----------DRLIQK----GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
                     D  I+K     L  +  TY+ ++    K+ G+  A  L +++I  G  P+
Sbjct: 213 GVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPD 272

Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR-WE------ 290
           +V+Y+ ++ GLCK+GR  EA    R++   G +PN V+Y  L+ SL   G  WE      
Sbjct: 273 VVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQS 332

Query: 291 ----------------------------EANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
                                       EA ++   +   +  P  +TY  LI      G
Sbjct: 333 QLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVG 392

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             +    +L EM +    P+  +Y+ II     +G +D  +  + +M  +   PN   Y 
Sbjct: 393 DMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYA 452

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L    C  GK + A  +   +           +  ++ +L R  +  +A +LL ++T  
Sbjct: 453 ILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSR 512

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G   D   Y+SL+ G    G    AL +   M E     DV  +N L+ GL +  + + +
Sbjct: 513 GLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-A 571

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
             V+  MIE G  PN+ TY I+++    Q EL+ + E+  E++  +++  S
Sbjct: 572 KSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSS 622



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/472 (23%), Positives = 216/472 (45%), Gaps = 25/472 (5%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P ++    L+Y       + +   +   M+ S + P+  ++  LV+  CK GN+  A+ L
Sbjct: 8   PTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDL 67

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +  ++      +TVTYN+++ G C  G +NQ+  FL  +++K    +  T + L++   +
Sbjct: 68  LRNVD---VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCR 124

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
                   +++D++++ G   +++ +N L+ G CK G    A+     +  +G   ++VS
Sbjct: 125 IGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVS 184

Query: 276 YNILLRSLCMEGRWEEANELLAEM---------------------DGGDRSPTIVTYNIL 314
           YN L+   C  G +++A  LL E+                     D  +    ++TY  +
Sbjct: 185 YNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTI 244

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +       + A  + +EM+   F P   +Y+ I+  LC +G++    + L +M     
Sbjct: 245 ISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGV 304

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN   Y  L   L   G   EAFA    L  +  +        ++  L +  K  +A  
Sbjct: 305 DPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAED 364

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   ++K    P+S TY++LI G C  G +E    +   MEE    P+V  +++++ G  
Sbjct: 365 MFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYT 424

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
           K    D ++ V + M+++  +PN   Y IL++G     + E++ ++  E++L
Sbjct: 425 KKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKL 476



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 222/497 (44%), Gaps = 23/497 (4%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS----------- 134
           +ERM  +G   D+V    L+   CK  +  KA  ++  +  S  + D+            
Sbjct: 170 VERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKD 229

Query: 135 ----------SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
                     +YT +++  CK+  +  A  L E+M   G+  + VTY+S+V GLC  G L
Sbjct: 230 DNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRL 289

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           +++ + L  + + G+ PN   Y+ L+++ +K      A      ++ +G   +LV    L
Sbjct: 290 SEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTL 349

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           + GL K  + +EA   FR L      PN ++Y  L+   C  G  E    LL EM+    
Sbjct: 350 VDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHI 409

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
           +P ++TY+ +I      G  D A+ V+ +M+     P+A  Y  +I   C  GK ++   
Sbjct: 410 NPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATD 469

Query: 365 CLDQMFHRRCKPNEGTYNGLAMLCGVGK-VQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
             ++M     K N   ++ L      GK + EA  +++ + ++        Y  ++    
Sbjct: 470 LYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFF 529

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + GK   A  ++ EMT+     D  TY+ LI GL   G   EA  ++  M E    P+  
Sbjct: 530 KAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQA 588

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +N ++   CK    D +LE++  M     MP+  T   LV G++   E+E +  VL E+
Sbjct: 589 TYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEM 648

Query: 544 QLRQVVSESAVERLVMQ 560
            +  +     + R+++ 
Sbjct: 649 SVMGIHPNLVIHRVLLN 665



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/477 (24%), Positives = 217/477 (45%), Gaps = 37/477 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M  K   P+V+  ++++    K   + +AI VM+ M+   IIP+A  Y  L++  CK
Sbjct: 401 LQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCK 460

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A  L  +M+  G   N V ++ LV  L     ++++ + L  +  +GL+ +   
Sbjct: 461 AGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVN 520

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++  +K     AA+ +++++  K    ++V+YNVL+ GL + G+ E A   +  + 
Sbjct: 521 YTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMI 579

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PN  +YNI++++ C +G  + A EL  EM      P+ +T N L+  L+  G+ +
Sbjct: 580 EMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIE 639

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL- 384
            A+ VL+EM      P+   +  ++      GK + V++  +Q+     K N+  YN L 
Sbjct: 640 KAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLI 699

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF------------ 432
            + C +   ++A ++++ +      +    Y  +I   C      +A             
Sbjct: 700 VVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVS 759

Query: 433 -----------------------QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                                  +L  +M + G  PD+ TY +LI G    G  +E++ +
Sbjct: 760 PNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRL 819

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           +  M    + P    +N L+    K  + D + E+   M  +G  P+ +TY IL+ G
Sbjct: 820 YCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICG 876



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 208/454 (45%), Gaps = 2/454 (0%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           T  + H L +A    E M+  G  PDVV  ++++  LCK  ++ +A +++  M   G+ P
Sbjct: 247 TYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDP 306

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           +  +YT L++ L K G+   A     ++   G   + V   +LV GL       ++    
Sbjct: 307 NHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMF 366

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             L +  L+PN+ TY+ L++   K   +     LL ++  K   PN+++Y+ ++ G  K+
Sbjct: 367 RALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKK 426

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  +EAI   + +  +   PN   Y IL+   C  G+ E A +L  EM         V +
Sbjct: 427 GILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLF 486

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           ++L+ +L    + D A ++L ++          +Y  ++      GK    +  +++M  
Sbjct: 487 DVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTE 546

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +    +  TYN L   L   GK  EA ++   +     +  Q  Y  +I + C++G+   
Sbjct: 547 KSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDN 605

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L  EM  +   P S T ++L+ GL   G IE+A+ +   M      P++     LL 
Sbjct: 606 ALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLN 665

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
              KS + +  L++ + +++ G   N+  Y  L+
Sbjct: 666 ASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLI 699



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 199/462 (43%), Gaps = 58/462 (12%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A   +E M  K    DVV    L+  L +  K + A  V   M+  G+ P+ ++Y  ++ 
Sbjct: 537 ALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIK 595

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK+G +  A++L  +M+ +    +++T N+LV GL   G + +++  L+ +   G+ P
Sbjct: 596 AYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHP 655

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N   +  LL A+ K    +A +++ + ++  G K N  +YN L+   C+   T++A    
Sbjct: 656 NLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVL 715

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           + +   GF  + V+YN L+R  C     ++A     +M     SP IVTYN+L+G L   
Sbjct: 716 KYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGA 775

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G      ++ D+M +    P A++Y+ +I+     G     ++   +M  +   P   TY
Sbjct: 776 GLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTY 835

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
           N L                                  I+   + GK  QA +LL EM   
Sbjct: 836 NVL----------------------------------ISDFAKVGKMDQARELLNEMQVR 861

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  P S TY  LI G C                     PD+D        L K  RTD +
Sbjct: 862 GVPPSSSTYDILICGWC----------------NLSKHPDLDR------TLKKIYRTD-A 898

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             +   M +KG +P ++T   +    A   ++  + ++LKE+
Sbjct: 899 KNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEI 940



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 132/281 (46%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L++A      M S    P  +    L+  L +A +++KA+ V+  M   GI P+   + 
Sbjct: 602 ELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHR 661

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N   K G     +Q+ E++ D G   N   YN+L+   C L    ++   L  +I+ 
Sbjct: 662 VLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRD 721

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G V +  TY+ L+    +   V  A+     ++ +G  PN+V+YN+LL GL   G   E 
Sbjct: 722 GFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAER 781

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +   G  P+  +Y+ L+      G  +E+  L  EM      P   TYN+LI  
Sbjct: 782 DELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISD 841

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
            A  GK D A ++L+EM      PS+++Y+ +I   C+  K
Sbjct: 842 FAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSK 882



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/143 (20%), Positives = 63/143 (44%), Gaps = 5/143 (3%)

Query: 411 PQEFYKY--VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           P   Y +  ++ + C+ G    A  LL  +       D+ TY+++I G C  GL+ +A  
Sbjct: 42  PPNVYTHNVLVHAWCKMGNLILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFG 98

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
              +M + D   D    N L+ G C+         +   ++  G   +   +  L++G  
Sbjct: 99  FLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYC 158

Query: 529 HQDELELSAEVLKELQLRQVVSE 551
              E+ L+ ++++ ++   ++S+
Sbjct: 159 KAGEMSLALDLVERMRKEGLLSD 181


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 223/446 (50%), Gaps = 5/446 (1%)

Query: 102  TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-- 159
            ++++  L  A  +++AI +   + +    P A +Y  ++  L  +G      QL  +M  
Sbjct: 1153 SDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMST 1212

Query: 160  EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
            E + +P +TVTY++L+   C LG  + ++Q L+ + + G+ P    Y+ L+   +K    
Sbjct: 1213 EGHCFP-DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDA 1271

Query: 220  HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
            H A+ L +++  +  +P++ +Y  L+ GL K GR +EA  FF ++  +G  P+ V  N +
Sbjct: 1272 HGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNM 1331

Query: 280  LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL-AYHGKTDHALKVLDEMVKGR 338
            +  L   GR ++A +L  EM+     P++VTYN +I +L     +        + M +  
Sbjct: 1332 INFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 1391

Query: 339  FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE-AF 397
              PS+ +Y+ +I   C   +++  +  L++M  +   P    Y  L    G  K  + A 
Sbjct: 1392 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 1451

Query: 398  AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
             + Q L     SS    Y  +I  L + G+   A  +  EM K G  PD Y Y++L+ GL
Sbjct: 1452 ELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGL 1511

Query: 458  CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
               G+++EAL     M+E+   PD++++N +L GL K+     ++E+   M +    P+ 
Sbjct: 1512 ARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDV 1571

Query: 518  TTYTILVEGIAHQDELELSAEVLKEL 543
             +Y  ++  ++H    E +++++KE+
Sbjct: 1572 VSYNTVLGALSHAGMFEEASKLMKEM 1597



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 188/409 (45%), Gaps = 3/409 (0%)

Query: 89   MVSKGHK-PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
            M ++GH  PD V  + L+   CK  +   AI+++  M   G+ P    YT L+    K  
Sbjct: 1210 MSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFN 1269

Query: 148  NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +   A+ L E+M       +  TY  L+RGL   G ++++  F   + ++G  P+    +
Sbjct: 1270 DAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMN 1329

Query: 208  FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGRTEEAIRFFRDLPS 266
             ++    K   +  AMKL  ++      P++V+YN ++  L + + R  E   +F  +  
Sbjct: 1330 NMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKE 1389

Query: 267  KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
             G  P+  +Y+IL+   C   R E+A  LL EMD     P    Y  LI +L    + D 
Sbjct: 1390 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 1449

Query: 327  ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-A 385
            A ++  E+ +     SA  Y  +I  L   G++D  +   D+M    C P+   YN L +
Sbjct: 1450 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMS 1509

Query: 386  MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             L   G + EA + ++ +           Y  ++  L + G  ++A ++L  M +    P
Sbjct: 1510 GLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRP 1569

Query: 446  DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
            D  +Y++++  L   G+ EEA ++   M    ++ D+  ++++L  + K
Sbjct: 1570 DVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 177/384 (46%), Gaps = 6/384 (1%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            + + A   L  M   G +P     T L+    K N    A+ + E M      PD  +YT
Sbjct: 1235 RRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 1294

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+  L K G +  A     +M+  G   +TV  N+++  L   G L+ +++    +   
Sbjct: 1295 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 1354

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAM-KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
              +P+  TY+ +++A ++ +   + +    + +   G  P+  +Y++L+ G CK  R E+
Sbjct: 1355 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEK 1414

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            A+    ++  KGF P   +Y  L+ +L    R++ A EL  E+     S +   Y ++I 
Sbjct: 1415 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 1474

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
             L   G+ D A+ + DEM K    P   +YN +++ L   G +D  +  + +M    C P
Sbjct: 1475 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 1534

Query: 377  NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE---FYKYVITSLCRKGKTYQAFQ 433
            +  +YN   +L G+ K       ++ L N + S+ +     Y  V+ +L   G   +A +
Sbjct: 1535 DINSYN--IILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASK 1592

Query: 434  LLYEMTKYGFTPDSYTYSSLIRGL 457
            L+ EM   GF  D  TYSS++  +
Sbjct: 1593 LMKEMNTLGFEYDLITYSSILEAI 1616



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 191/455 (41%), Gaps = 45/455 (9%)

Query: 132  DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN---LNQSL 188
            D S+Y  L++CL      G   +++++M     P   VT   L   + MLGN   + Q++
Sbjct: 1112 DTSTYMALIHCLEVVEQYGEMWKMIQEM--VRNPICVVTPTELSDVVRMLGNAKMVRQAI 1169

Query: 189  QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTG 247
                ++  +   P A  Y+ ++     E       +L +++  +G   P+ V+Y+ L++ 
Sbjct: 1170 TIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISA 1229

Query: 248  LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
             CK GR + AI+   ++   G +P    Y +L+           A  L  EM      P 
Sbjct: 1230 FCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPD 1289

Query: 308  IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            + TY  LI  L   G+ D A     EM +   RP     N +I  L   G++D  +K   
Sbjct: 1290 VFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQ 1349

Query: 368  QMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR 424
            +M   RC P+  TYN +  A+     +  E  +  + +  +   SP  F Y  +I   C+
Sbjct: 1350 EMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERM-KESGISPSSFTYSILIDGFCK 1408

Query: 425  KGKTYQAFQLLYEMTKYGFTPDSYTYSSLI------------------------------ 454
              +  +A  LL EM + GF P    Y SLI                              
Sbjct: 1409 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 1468

Query: 455  -----RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
                 + L   G +++A+ +F  M +    PDV  +NAL+ GL ++   D +L   + M 
Sbjct: 1469 YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ 1528

Query: 510  EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            E G +P+  +Y I++ G+A       + E+L  ++
Sbjct: 1529 EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 1563



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 142/284 (50%), Gaps = 4/284 (1%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA-NKMKKAIKVMEMMVSSGIIPDASSY 136
            +L+DA    + M +    P VV    ++  L ++ ++  +     E M  SGI P + +Y
Sbjct: 1340 RLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 1399

Query: 137  TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            + L++  CK   +  AM L+E+M++ G+P     Y SL+  L      + + +    L +
Sbjct: 1400 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE 1459

Query: 197  KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
                 +A  Y+ +++   K   +  A+ + D++   G  P++ +YN L++GL + G  +E
Sbjct: 1460 NCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDE 1519

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            A+   R +   G  P++ SYNI+L  L   G    A E+L+ M      P +V+YN ++G
Sbjct: 1520 ALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLG 1579

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
            +L++ G  + A K++ EM    F     +Y+ I+  +   GKVD
Sbjct: 1580 ALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI---GKVD 1620


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 222/486 (45%), Gaps = 4/486 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ KLN A    + M   G  P+V+    ++  LCKA K+++A  + E M      
Sbjct: 412 DMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCT 471

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A +++ L++ L K G V  A  L EKM D G+    + Y SL+R     G      + 
Sbjct: 472 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 531

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  G  P+    +  ++  +K         L  +I A G  P+  SY++L+ GL K
Sbjct: 532 YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVK 591

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G   E    F  +  +G   +  +YN ++   C  G+  +A +LL EM      PT+VT
Sbjct: 592 AGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 651

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  +I  LA   + D A  + +E      + +   Y+ +I      G++D     ++++ 
Sbjct: 652 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 711

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +   PN  T+N L   L    ++ EA    QS+ + +    Q  Y  +I  LCR  K  
Sbjct: 712 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFN 771

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +AF    EM K G  P++ TY+++I GL   G I EA  +F   +     PD  ++NA++
Sbjct: 772 KAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 831

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA---EVLKELQLR 546
            GL  + +   +  +F+    KG   +  T  +L++ +   + LE +A    VLKE    
Sbjct: 832 EGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAKS 891

Query: 547 QVVSES 552
           Q  S S
Sbjct: 892 QHASRS 897



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 141/558 (25%), Positives = 248/558 (44%), Gaps = 85/558 (15%)

Query: 80  NDAFLQLERMVSK----GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
           N  F  LER++ +    G  P    +  L+ +  K+ K+++A  +++ M      P  S+
Sbjct: 138 NTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSA 197

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           YT L+  L +       + L  +M++ GY  N   + +L+R     G ++ +L  LD + 
Sbjct: 198 YTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMK 257

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
              L  +   Y+  ++   K   V  + K   ++ + G  P+ V+Y  ++  LCK  R +
Sbjct: 258 SNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLD 317

Query: 256 EAIRFF------RDLP-----------------------------SKGFEPNVVSYNILL 280
           EA+  F      R +P                             +KG  P+V++YN +L
Sbjct: 318 EAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCIL 377

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
             L  + R EEA  +  EM   D  P + TYNILI  L   GK + AL++ D+M +    
Sbjct: 378 TCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLF 436

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAI 399
           P+  + N +I RLC   K++      + M  + C PN  T++ L    G  G+V +A+++
Sbjct: 437 PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL 496

Query: 400 IQSL----------------------GNKQNSSPQEFYKYVITSLC-------------- 423
            + +                      G K++    + YK ++ + C              
Sbjct: 497 YEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG--HKIYKEMVHTGCSPDLTLINTYMDCV 554

Query: 424 -RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
            + G+T +   L  E+  +GF PD+ +YS LI GL   GL  E  E+F  M+E     D 
Sbjct: 555 FKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDT 614

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
             +NA++ G CKS + + + ++ + M  KG  P   TY  +++G+A  D L+ +  + +E
Sbjct: 615 HAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEE 674

Query: 543 -----LQLRQVVSESAVE 555
                ++L  VV  S ++
Sbjct: 675 AKSNGIKLNVVVYSSLID 692



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 225/477 (47%), Gaps = 2/477 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A+  LER  +KG  P V+    +L  L K  ++++A+++ E M    + P+  +Y 
Sbjct: 350 KFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYN 408

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC++G +  A+++ + ME  G   N +T N ++  LC    L ++    + +  K
Sbjct: 409 ILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 468

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PNA T+S L++   K   V  A  L + ++  G  P  + Y  L+    K GR E+ 
Sbjct: 469 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 528

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + ++++   G  P++   N  +  +   G  E+   L  E++     P   +Y+ILI  
Sbjct: 529 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  +   ++   M +        +YN +I   C  GKV+   + L++M  +   P 
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 648

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  L  + ++ EA+ + +   +         Y  +I    + G+  +A+ ++ 
Sbjct: 649 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 708

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+ + G TP+ YT++ L+  L     I EAL  F  M++    P+   ++ L+ GLC+ R
Sbjct: 709 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVR 768

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           + + +   +Q M + G  PN  TYT ++ G+A    +  ++ +    +    + +SA
Sbjct: 769 KFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSA 825



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 199/461 (43%), Gaps = 37/461 (8%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F   E+   K H P+   +  LL  + +  +     +++E M  SG  P ++    LV  
Sbjct: 112 FQWAEKQTEKVHCPEAYNS--LLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVAN 169

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K   +  A  +++ M  + +      Y  L+  L  +   +  L    ++ + G   N
Sbjct: 170 CVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVN 229

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              ++ L+    +E  V AA+ LLD++ +     ++V YNV +    K G+ + + +FF 
Sbjct: 230 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFH 289

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++ S G  P+ V+Y  ++  LC   R +EA EL  +++   + P    YN +I      G
Sbjct: 290 EMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAG 349

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K D A  +L+        PS  +YN I+  L  + +V+  ++  ++M  R   PN  TYN
Sbjct: 350 KFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYN 408

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L                                  I  LCR+GK   A ++  +M + G
Sbjct: 409 IL----------------------------------IDMLCREGKLNAALEIRDDMERAG 434

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             P+  T + +I  LC    +EEA  IF  M++    P+   F++L+ GL K  R D + 
Sbjct: 435 LFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAY 494

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +++ M++ G +P    YT L+         E   ++ KE+
Sbjct: 495 SLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 252/521 (48%), Gaps = 15/521 (2%)

Query: 37  LNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRH-----RDHKLNDAFLQLERMVS 91
           ++   +R +  T V +S K   +    RK    +DT       R  ++ + + ++ +M+ 
Sbjct: 84  VDHWLVREVMKTDVGVSVKMQFFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQ 143

Query: 92  KGHKPDV-----VQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           +  +  V     ++ ++++  L  A  + KA+ +   + +    P A +Y  ++  L  +
Sbjct: 144 EMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHE 203

Query: 147 GNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           G      +L  +M + G  +P +TVTY++L+   C LG  + ++  L+ +   G+ P A 
Sbjct: 204 GEYEKVHELYNEMSNEGQCFP-DTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAK 262

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            Y+ L+   +K   VH A+ L +++  +  +P++ +Y  L+ GL K GR +EA  FF ++
Sbjct: 263 IYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEM 322

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             +G  P+ V  N ++  L   GR ++A +L  EM+     P++VTYN +I +L      
Sbjct: 323 RREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSR 382

Query: 325 DHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              +    E +KG    PS  +Y+ +I   C   + +  +  L++M  +   P    Y  
Sbjct: 383 VSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCS 442

Query: 384 LAMLCGVGKVQE-AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L    G  K  + A  + Q L     SS    Y  +I  L + G+   A  L  EM + G
Sbjct: 443 LIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLG 502

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            TP+ Y Y++L+ GL   G+++EAL     M+++   PD++++N +L  L K+   D ++
Sbjct: 503 CTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAM 562

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +   M +    P+  +Y  ++  ++H    E +A+++KE+
Sbjct: 563 GMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEM 603



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 184/420 (43%), Gaps = 10/420 (2%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN---LNQSL 188
           D S+Y  L+ CL      G   +++++M     P   VT   L   + MLGN   +++++
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEM--VRNPVCVVTPMELSDIIRMLGNAKMISKAV 175

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTG 247
               ++  +   P A  Y+ ++     E       +L +++  +G   P+ V+Y+ L++ 
Sbjct: 176 AIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISA 235

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK GR + AI    ++   G +P    Y +L+  L        A  L  EM      P 
Sbjct: 236 FCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPD 295

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + TY  LI  L   G+ D A     EM +   RP     N +I  L   G++D  +K  +
Sbjct: 296 VFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFE 355

Query: 368 QMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR 424
           +M   RC P+  TYN +  A+     +V E  +  + +      SP  F Y  +I   C+
Sbjct: 356 EMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKG-SGISPSPFTYSILIDGFCK 414

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
             +T +A  LL EM + GF P    Y SLI  L      + A E+F  ++E         
Sbjct: 415 TNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARV 474

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +  ++  L K+ R D ++++F  M   G  PN   Y  L+ G+A    L+ +   ++ +Q
Sbjct: 475 YAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQ 534



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 39/319 (12%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS----------- 126
           +L++A+     M  +G +PD V   N++  L KA ++  AIK+ E M +           
Sbjct: 311 RLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYN 370

Query: 127 -------------------------SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
                                    SGI P   +Y+ L++  CK      AM L+E+M++
Sbjct: 371 TIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDE 430

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G+P     Y SL+  L      + + +    L +     +A  Y+ +++   K   +  
Sbjct: 431 KGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 490

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+ L D++   G  PN+ +YN L++GL + G  +EA+   R +   G  P++ SYNI+L 
Sbjct: 491 AVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILN 550

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
           +L   G  + A  +L  M      P  V+YN ++G+L++ G  + A K++ EM    F  
Sbjct: 551 ALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDY 610

Query: 342 SAASYNPIIARLCSEGKVD 360
              +Y+ I+  +   GKVD
Sbjct: 611 DLITYSSILEAI---GKVD 626


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/505 (24%), Positives = 227/505 (44%), Gaps = 36/505 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M++    P+V     L+  LC   K+KKA+ ++ MM  +G +P   SY  L++  CK
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG   +A+ L+  ME  G   +  TYN  +  LC      Q    L ++  K + PN  +
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    KE  +  A ++ +++I     PNL++YN+L+ G C  G  EEA+R    + 
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVME 342

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +    PN V+   LL  L    +++ A  +L        S   +++ ++I  L  +G  D
Sbjct: 343 ANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLD 402

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++L EM K    P   +++ +I   C  G ++   + + +++     PN   ++ L 
Sbjct: 403 EAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLI 462

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C VG V EA     ++     ++       ++ SLC  GK  +A + L+ +++ G  
Sbjct: 463 YNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLV 522

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK---------- 494
           P+S T+  +I G    G    A  +F  M    + P    + +LL  LCK          
Sbjct: 523 PNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKL 582

Query: 495 -----------------------SRRTDL--SLEVFQMMIEKGQMPNETTYTILVEGIAH 529
                                  S+  +L  ++ +F+ MI+   +P+  TYT ++ G+  
Sbjct: 583 LKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIR 642

Query: 530 QDELELSAEVLKELQLRQVVSESAV 554
           +  L  +   L  L  +++++ +++
Sbjct: 643 EGRLVCAFIFLGRLMQKEILTLNSI 667



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 210/471 (44%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +  A      M+ +G KP V     ++  + K  +        + M++S + P+ S
Sbjct: 117 RQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVS 176

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+  L++ LC +G +  A+ ++  ME  GY    V+YN+L+   C  G    +L  +  +
Sbjct: 177 SFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHM 236

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG+  +  TY+  +++  +         +L  +  K   PN VSYN L+ G  KEG+ 
Sbjct: 237 ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKI 296

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A R F ++      PN+++YNIL+   C+ G +EEA  +L  M+  D  P  VT   L
Sbjct: 297 GVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTL 356

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L    K D A  +L+     R   +  S+  +I  LC  G +D   + L +M     
Sbjct: 357 LNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGV 416

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  T++ L    C VG + +A  ++  +  +        +  +I + C+ G  Y+A +
Sbjct: 417 HPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMK 476

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
               M   G   D++T +SL+  LC  G + EA E    +      P+   F+ ++ G  
Sbjct: 477 FYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYA 536

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
                  +  VF  MI  G  P+  TY  L++ +        + ++LK+L 
Sbjct: 537 NVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLH 587



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 214/468 (45%), Gaps = 8/468 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A + +  M  KG + DV      +  LC+ ++  +   V++ M +  I P+  SY  L+N
Sbjct: 229 ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLIN 288

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
              K+G +G A ++  +M +     N +TYN L+ G C+ GN  ++L+ LD +    + P
Sbjct: 289 GFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRP 348

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  T   LL   YK      A  +L+         N +S+ V++ GLC+ G  +EA +  
Sbjct: 349 NEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLL 408

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++   G  P+++++++L+   C  G   +A E+++++      P  V ++ LI +    
Sbjct: 409 IEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKV 468

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    A+K    M          + N ++A LC  GK+    + L  +      PN  T+
Sbjct: 469 GNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTF 528

Query: 382 ----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
               NG A    VG    AF++   + +  +      Y  ++  LC+    ++A +LL +
Sbjct: 529 DCIINGYA---NVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +       D+ +Y++LI  +   G + EA+ +F  M + +  PD   +  +L GL +  R
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 498 TDLSLEVFQMMIEKGQMP-NETTYTILVEGIAHQDELELSAEVLKELQ 544
              +      +++K  +  N   YT  ++G+    + + +  + KE++
Sbjct: 646 LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEME 693



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 190/423 (44%), Gaps = 1/423 (0%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           + + +  L+    ++G VG+A+     M   G+  +  T N ++  +      +    F 
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFF 163

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
            +++   + PN  +++ L+     +  +  A+ +L  +   G  P +VSYN LL+  CK+
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR + A+     +  KG + +V +YN+ + SLC   R  +   +L +M     +P  V+Y
Sbjct: 224 GRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSY 283

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N LI      GK   A +V +EM++    P+  +YN +I   C  G  +  ++ LD M  
Sbjct: 284 NTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEA 343

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              +PNE T   L   L    K   A  I++     + S     +  +I  LCR G   +
Sbjct: 344 NDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDE 403

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AFQLL EM K G  PD  T+S LI G C  G I +A E+   +    + P+   F+ L+ 
Sbjct: 404 AFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIY 463

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
             CK      +++ +  M   GQ  +  T   LV  +    +L  + E L  +    +V 
Sbjct: 464 NSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVP 523

Query: 551 ESA 553
            S 
Sbjct: 524 NSV 526



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 220/506 (43%), Gaps = 72/506 (14%)

Query: 117  AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
            A  V + M+S G  P   +Y  L+  LCK  N   A +L++K+       +T++YN+L+ 
Sbjct: 544  AFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIV 603

Query: 177  GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             +   GNL ++++  + +IQ  ++P+++TY+ +L    +E  +  A   L  ++ K    
Sbjct: 604  EISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILT 663

Query: 237  -NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
             N + Y   + GL K G+++ A+  F+++  KG   ++++ N +       G+   A+ L
Sbjct: 664  LNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSL 723

Query: 296  LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
            +++    +  P + T+NIL+   +         K+ + M +  F P+  +Y+ +I  LC+
Sbjct: 724  ISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCN 783

Query: 356  EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC----GVGKV------------------ 393
             G ++L +K L          ++ T+N L   C     + KV                  
Sbjct: 784  HGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDT 843

Query: 394  --------------QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
                          Q  F  +  +  K      + Y  ++  +CR G    AF+L  +M 
Sbjct: 844  QKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMV 903

Query: 440  KYGFTPDSYTYSSLIRGLCMEGLIEEALEIF----------------------------- 470
              G + D     +++RGL + G IEEA+ I                              
Sbjct: 904  ALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFK 963

Query: 471  ------VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
                  ++ME Y  K D+  +N L+   C +     +L+ ++ + +KG +PN TTY +LV
Sbjct: 964  EAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLV 1023

Query: 525  EGIAHQDELELSAEVLKELQLRQVVS 550
              I+ +  +     VLK+L  R +VS
Sbjct: 1024 SAISTKHYVSRGEIVLKDLNDRGLVS 1049



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/505 (21%), Positives = 231/505 (45%), Gaps = 19/505 (3%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           ++  K + A   LER        + +  T ++  LC+   + +A +++  M   G+ PD 
Sbjct: 361 YKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDI 420

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +++ L+N  CK GN+  A +++ K+   G+  N V +++L+   C +GN+ ++++F   
Sbjct: 421 ITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAA 480

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G   + FT + L+ +  +   +  A + L  I   G  PN V+++ ++ G    G 
Sbjct: 481 MNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGD 540

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              A   F  + S G  P+  +Y  LL+ LC    + EA +LL ++     +   ++YN 
Sbjct: 541 GSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNT 600

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  ++  G    A+++ +EM++    P + +Y  I++ L  EG++      L ++  + 
Sbjct: 601 LIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKE 660

Query: 374 CKPNEGTYNGLAMLCGV------GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
                 T N +   C +      G+ + A  + + +  K  S        +     R GK
Sbjct: 661 IL----TLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGK 716

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
            + A  L+ +       P+  T++ L+ G      I    +++ +M    + P+   +++
Sbjct: 717 VFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHS 776

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+LGLC     +L +++ +M I +    ++ T+ +L+      ++L+   ++   +++ +
Sbjct: 777 LILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFR 836

Query: 548 V---------VSESAVERLVMQYDF 563
           V         V++  V R+V Q  F
Sbjct: 837 VSLDKDTQKAVTDVLVRRMVSQNYF 861



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 205/480 (42%), Gaps = 10/480 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+  L++AF  L  M   G  PD++  + L+   CK   + KA +VM  +   G +
Sbjct: 393 DGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFV 452

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   ++ L+   CK GNV  AM+    M   G   +  T NSLV  LC  G L ++ +F
Sbjct: 453 PNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEF 512

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + + GLVPN+ T+  ++           A  + D +I+ G  P+  +Y  LL  LCK
Sbjct: 513 LHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCK 572

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
                EA +  + L       + +SYN L+  +   G   EA  L  EM   +  P   T
Sbjct: 573 GQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYT 632

Query: 311 YNILIGSLAYHGKTDHALKVLDE-MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           Y  ++  L   G+   A   L   M K     ++  Y   I  L   G+    +    +M
Sbjct: 633 YTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEM 692

Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +    +    N +      +GKV  A ++I    NK        +  ++    R    
Sbjct: 693 EEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDI 752

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
              F+L   M + GF P+  TY SLI GLC  G++E  +++  +        D   FN L
Sbjct: 753 MSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNML 812

Query: 489 LLGLCK----SRRTDLS--LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           +   C+     +  DL+  +EVF++ ++K      T   +LV  +  Q+      E+LK+
Sbjct: 813 IRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT--DVLVRRMVSQNYFVFMHEMLKK 870



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/324 (18%), Positives = 133/324 (41%), Gaps = 35/324 (10%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   R  K+  A   + +  +K   P++     LL+   +   +    K+  +M  SG  
Sbjct: 709  DGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFF 768

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
            P+  +Y  L+  LC  G +   +++++         + +T+N L+R  C + +L++ +  
Sbjct: 769  PNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDL 828

Query: 190  ----------------------------------FLDRLIQKGLVPNAFTYSFLLEAAYK 215
                                              F+  +++KG +P +  Y  +++   +
Sbjct: 829  THNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCR 888

Query: 216  ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
               +  A KL D ++A G   +  +   ++ GL   G+ EEA+   + +      P   +
Sbjct: 889  VGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTST 948

Query: 276  YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
            +  L+   C +  ++EA+ L   M+       IV YN+LI +   +G    AL   +E+ 
Sbjct: 949  FTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIK 1008

Query: 336  KGRFRPSAASYNPIIARLCSEGKV 359
            +    P+  +Y  +++ + ++  V
Sbjct: 1009 QKGLLPNMTTYRVLVSAISTKHYV 1032



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R   +  AF   ++MV+ G   D      ++  L    K+++A+ +++ M+    IP  S
Sbjct: 888  RVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTS 947

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++T L++  CKK N   A  L   ME Y    + V YN L+   C  G++  +L F + +
Sbjct: 948  TFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEI 1007

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
             QKGL+PN  TY  L+ A   +  V     +L D+  +G
Sbjct: 1008 KQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRG 1046



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 36/193 (18%)

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT------------------- 449
           SS    +  +I    R+G    A      M   GF P  YT                   
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161

Query: 450 ----------------YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
                           ++ LI  LC++G +++A+ I  +ME   Y P + ++N LL   C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV-SES 552
           K  R   +L +   M  KG   +  TY + ++ +           VLK+++ + +  +E 
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 553 AVERLVMQYDFEG 565
           +   L+  +  EG
Sbjct: 282 SYNTLINGFVKEG 294



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K+ +A   L+RM+     P     T L++  CK +  K+A  +  +M    +  D  +Y 
Sbjct: 926  KIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYN 985

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++  C  G+V  A+   E+++  G   N  TY  LV  +     +++    L  L  +
Sbjct: 986  VLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDR 1045

Query: 198  GLV 200
            GLV
Sbjct: 1046 GLV 1048


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 200/405 (49%), Gaps = 3/405 (0%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           S G  P+  +Y  ++  LCK G +  A+    +M       +  TY++L+ GLC    ++
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           +++  LD +  +G +PN  T++ L++A  K   +  A KL+D++  KG  PN V+YN L+
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            GLC +G+ ++A+     + S    PN V+Y  ++  L  + R E+   +L  M+   + 
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
                Y+ LI  L   GK+++A+++  EM +   +P+   Y   I  LC + K D     
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 430

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L +M  +   PN  TY+ L       G  Q+A  + + + ++           ++  LC 
Sbjct: 431 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 490

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME--EYDYKPDV 482
            G+  +A  +   M   G  PD   YSS+I+GLC  G +++ L++F  M+  E   +PDV
Sbjct: 491 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 550

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
             +N L   LC+      ++++   M+++G  P+  T  I +E +
Sbjct: 551 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 192/383 (50%), Gaps = 3/383 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ A      M  K   PDV   + L+  LCK  ++ +A+ +++ M + G +P+  ++ 
Sbjct: 213 QIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFN 272

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L K G++  A +LV+ M   G   N VTYN+L+ GLC+ G L+++L  L++++  
Sbjct: 273 VLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS 332

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             VPN  TY  ++    K+R     + +L  +  +G K N   Y+ L++GL KEG++E A
Sbjct: 333 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENA 392

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +R ++++  KG +PNVV Y   +  LC + + +EA ++L EM      P   TY+ L+  
Sbjct: 393 VRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG 452

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G +  A+ V  EM+    R +    + ++  LC  G++   +     M     KP+
Sbjct: 453 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPD 512

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI--TSLCRKGKTYQAFQL 434
              Y+ +   LC VG V +   +   +  ++  S  +   Y I   +LCR+    +A  L
Sbjct: 513 VVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDL 572

Query: 435 LYEMTKYGFTPDSYTYSSLIRGL 457
           L  M   G  PDS T +  +  L
Sbjct: 573 LNSMLDEGCDPDSLTCNIFLETL 595



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 218/441 (49%), Gaps = 5/441 (1%)

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV-TYNSLVRG 177
           +V++ M   G +   + +  +     K    G A+    +M +  +   TV ++NS++  
Sbjct: 110 QVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNV 169

Query: 178 LCMLGNLNQSLQFLDRLI---QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +   G+ + + +F   +     KG  PN  TY+ +++A  K   +  A+    ++  K  
Sbjct: 170 IIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNC 229

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P++ +Y+ L+ GLCKE R +EA+    ++ ++G  PN V++N+L+ +L   G    A +
Sbjct: 230 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 289

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L+  M      P  VTYN LI  L   GK D AL +L++MV  +  P+  +Y  II  L 
Sbjct: 290 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 349

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            + + +  V  L  M  R  K NE  Y+ L + L   GK + A  + + +  K       
Sbjct: 350 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 409

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y   I  LCR  K  +A  +L EM   GF P+++TYSSL++G   +G  ++A+ ++  M
Sbjct: 410 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 469

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
              D + +V   + LL GLC+S R   +L V+  M+ +G  P+   Y+ +++G+     +
Sbjct: 470 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 529

Query: 534 ELSAEVLKELQLRQVVSESAV 554
           +   ++  E+Q ++  S   V
Sbjct: 530 DKGLKLFYEMQCQEPKSRPDV 550



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 219/458 (47%), Gaps = 24/458 (5%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           K  + Q   L   L K  ++        + +SS   PDA            +  +  + Q
Sbjct: 27  KFSIHQLNPLTISLHKPARLSPFFYFSSLPLSSNSTPDA------------QNELSISPQ 74

Query: 155 LVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           + +    +G Y     T+  L+         +   Q LDR+ ++G V     +  + +A 
Sbjct: 75  IFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKAC 134

Query: 214 YKER----GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL---PS 266
            K       V+   ++ +D+  K     + S+N +L  + +EG    A +F+  +    S
Sbjct: 135 GKAHLPGEAVNFFHRMANDLHCKQ---TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANS 191

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KGF+PN+++YN+++++LC  G+ + A +   EM   + +P + TY+ L+  L    + D 
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+ +LDEM      P+  ++N +I  L   G +    K +D MF + C PNE TYN L  
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 311

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  GK+ +A ++++ + + +    Q  Y  +I  L ++ +      +L  M + G   
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 371

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           + Y YSSLI GL  EG  E A+ ++  M E   KP+V  + A + GLC+  + D + ++ 
Sbjct: 372 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 431

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           Q M+ KG +PN  TY+ L++G   + + + +  V KE+
Sbjct: 432 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 469


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 222/486 (45%), Gaps = 4/486 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ KLN A    + M   G  P+V+    ++  LCKA K+++A  + E M      
Sbjct: 167 DMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCT 226

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+A +++ L++ L K G V  A  L EKM D G+    + Y SL+R     G      + 
Sbjct: 227 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 286

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              ++  G  P+    +  ++  +K         L  +I A G  P+  SY++L+ GL K
Sbjct: 287 YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVK 346

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G   E    F  +  +G   +  +YN ++   C  G+  +A +LL EM      PT+VT
Sbjct: 347 AGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 406

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  +I  LA   + D A  + +E      + +   Y+ +I      G++D     ++++ 
Sbjct: 407 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 466

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
            +   PN  T+N L   L    ++ EA    QS+ + +    Q  Y  +I  LCR  K  
Sbjct: 467 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFN 526

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +AF    EM K G  P++ TY+++I GL   G I EA  +F   +     PD  ++NA++
Sbjct: 527 KAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 586

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA---EVLKELQLR 546
            GL  + +   +  +F+    KG   +  T  +L++ +   + LE +A    VLKE    
Sbjct: 587 EGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAKS 646

Query: 547 QVVSES 552
           Q  S S
Sbjct: 647 QHASRS 652



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 225/477 (47%), Gaps = 2/477 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A+  LER  +KG  P V+    +L  L K  ++++A+++ E M    + P+  +Y 
Sbjct: 105 KFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYN 163

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC++G +  A+++ + ME  G   N +T N ++  LC    L ++    + +  K
Sbjct: 164 ILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 223

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PNA T+S L++   K   V  A  L + ++  G  P  + Y  L+    K GR E+ 
Sbjct: 224 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 283

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + ++++   G  P++   N  +  +   G  E+   L  E++     P   +Y+ILI  
Sbjct: 284 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 343

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  +   ++   M +        +YN +I   C  GKV+   + L++M  +   P 
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 403

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  L  + ++ EA+ + +   +         Y  +I    + G+  +A+ ++ 
Sbjct: 404 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 463

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+ + G TP+ YT++ L+  L     I EAL  F  M++    P+   ++ L+ GLC+ R
Sbjct: 464 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVR 523

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           + + +   +Q M + G  PN  TYT ++ G+A    +  ++ +    +    + +SA
Sbjct: 524 KFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSA 580



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 230/519 (44%), Gaps = 53/519 (10%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLL----------YDLCKANKMKKAIKVMEMM 124
           +  KL +AF  ++ M     +P     T L+          + LCKAN++ +A+++ E +
Sbjct: 22  KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQL 81

Query: 125 -----------------------------------VSSGIIPDASSYTYLVNCLCKKGNV 149
                                               + G IP   +Y  ++ CL KK  V
Sbjct: 82  EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 141

Query: 150 GYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFL 209
             A+++ E+M+    P N  TYN L+  LC  G LN +L+  D + + GL PN  T + +
Sbjct: 142 EEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 200

Query: 210 LEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
           ++   K + +  A  + + +  K   PN V+++ L+ GL K GR ++A   +  +   G 
Sbjct: 201 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 260

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            P  + Y  L+RS    GR E+ +++  EM     SP +   N  +  +   G+T+    
Sbjct: 261 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 320

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLC 388
           +  E+    F P A SY+ +I  L   G  +   +    M  + C  +   YN  +   C
Sbjct: 321 LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 380

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             GKV +A+ +++ +  K +      Y  VI  L +  +  +A+ L  E    G   +  
Sbjct: 381 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 440

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYK---PDVDNFNALLLGLCKSRRTDLSLEVF 505
            YSSLI G    G I+EA   +++MEE   K   P+V  +N LL  L K+   + +L  F
Sbjct: 441 VYSSLIDGFGKVGRIDEA---YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 497

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           Q M +    PN+ TY+IL+ G+    +   +    +E+Q
Sbjct: 498 QSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ 536



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 218/473 (46%), Gaps = 32/473 (6%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P    +  L+ +  K+ K+++A  +++ M      P  S+YT L+      G 
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILI------GK 54

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           VG  +          +P            LC    L+++++  ++L Q   VP A+ Y+ 
Sbjct: 55  VGLMLL---------FPWV----------LCKANRLDEAVELFEQLEQNRKVPCAYAYNT 95

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++           A  LL+   AKG  P++++YN +LT L K+ R EEA+R F ++    
Sbjct: 96  MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 155

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PNV +YNIL+  LC EG+   A E+  +M+     P ++T NI+I  L    K + A 
Sbjct: 156 V-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 214

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
            + + M      P+A +++ +I  L   G+VD      ++M      P    Y  L    
Sbjct: 215 SIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSF 274

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
              G+ ++   I + + +   S         +  + + G+T +   L  E+  +GF PD+
Sbjct: 275 FKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDA 334

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            +YS LI GL   GL  E  E+F  M+E     D   +NA++ G CKS + + + ++ + 
Sbjct: 335 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 394

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE-----LQLRQVVSESAVE 555
           M  KG  P   TY  +++G+A  D L+ +  + +E     ++L  VV  S ++
Sbjct: 395 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 447


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 192/383 (50%), Gaps = 3/383 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++ A      M  K   PDV   + L+  LCK  ++ +A+ +++ M + G +P+  ++ 
Sbjct: 189 QIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFN 248

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L K G++  A +LV+ M   G   N VTYN+L+ GLC+ G L+++L  L++++  
Sbjct: 249 VLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS 308

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             VPN  TY  ++    K+R     + +L  +  +G K N   Y+ L++GL KEG++E A
Sbjct: 309 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENA 368

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +R ++++  KG +PNVV Y   +  LC + + +EA ++L EM      P   TY+ L+  
Sbjct: 369 VRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG 428

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G +  A+ V  EM+    R +    + ++  LC  G++   +     M     KP+
Sbjct: 429 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPD 488

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI--TSLCRKGKTYQAFQL 434
              Y+ +   LC VG V +   +   +  ++  S  +   Y I   +LCR+    +A  L
Sbjct: 489 VVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDL 548

Query: 435 LYEMTKYGFTPDSYTYSSLIRGL 457
           L  M   G  PDS T +  +  L
Sbjct: 549 LNSMLDEGCDPDSLTCNIFLETL 571



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 200/405 (49%), Gaps = 3/405 (0%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           S G  P+  +Y  ++  LCK G +  A+    +M       +  TY++L+ GLC    ++
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           +++  LD +  +G +PN  T++ L++A  K   +  A KL+D++  KG  PN V+YN L+
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            GLC +G+ ++A+     + S    PN V+Y  ++  L  + R E+   +L  M+   + 
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
                Y+ LI  L   GK+++A+++  EM +   +P+   Y   I  LC + K D     
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 406

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L +M  +   PN  TY+ L       G  Q+A  + + + ++           ++  LC 
Sbjct: 407 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 466

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME--EYDYKPDV 482
            G+  +A  +   M   G  PD   YSS+I+GLC  G +++ L++F  M+  E   +PDV
Sbjct: 467 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 526

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
             +N L   LC+      ++++   M+++G  P+  T  I +E +
Sbjct: 527 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 218/441 (49%), Gaps = 5/441 (1%)

Query: 119 KVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV-TYNSLVRG 177
           +V++ M   G +   + +  +     K    G A+    +M +  +   TV ++NS++  
Sbjct: 86  QVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNV 145

Query: 178 LCMLGNLNQSLQFLDRLI---QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +   G+ + + +F   +     KG  PN  TY+ +++A  K   +  A+    ++  K  
Sbjct: 146 IIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNC 205

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P++ +Y+ L+ GLCKE R +EA+    ++ ++G  PN V++N+L+ +L   G    A +
Sbjct: 206 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 265

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           L+  M      P  VTYN LI  L   GK D AL +L++MV  +  P+  +Y  II  L 
Sbjct: 266 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 325

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
            + + +  V  L  M  R  K NE  Y+ L + L   GK + A  + + +  K       
Sbjct: 326 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 385

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y   I  LCR  K  +A  +L EM   GF P+++TYSSL++G   +G  ++A+ ++  M
Sbjct: 386 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 445

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
              D + +V   + LL GLC+S R   +L V+  M+ +G  P+   Y+ +++G+     +
Sbjct: 446 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 505

Query: 534 ELSAEVLKELQLRQVVSESAV 554
           +   ++  E+Q ++  S   V
Sbjct: 506 DKGLKLFYEMQCQEPKSRPDV 526



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 219/458 (47%), Gaps = 24/458 (5%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQ 154
           K  + Q   L   L K  ++        + +SS   PDA            +  +  + Q
Sbjct: 3   KFSIHQLNPLTISLHKPARLSPFFYFSSLPLSSNSTPDA------------QNELSISPQ 50

Query: 155 LVEKMEDYG-YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           + +    +G Y     T+  L+         +   Q LDR+ ++G V     +  + +A 
Sbjct: 51  IFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKAC 110

Query: 214 YKER----GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL---PS 266
            K       V+   ++ +D+  K     + S+N +L  + +EG    A +F+  +    S
Sbjct: 111 GKAHLPGEAVNFFHRMANDLHCKQ---TVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANS 167

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           KGF+PN+++YN+++++LC  G+ + A +   EM   + +P + TY+ L+  L    + D 
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+ +LDEM      P+  ++N +I  L   G +    K +D MF + C PNE TYN L  
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 287

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  GK+ +A ++++ + + +    Q  Y  +I  L ++ +      +L  M + G   
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 347

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           + Y YSSLI GL  EG  E A+ ++  M E   KP+V  + A + GLC+  + D + ++ 
Sbjct: 348 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 407

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           Q M+ KG +PN  TY+ L++G   + + + +  V KE+
Sbjct: 408 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 445


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 212/422 (50%), Gaps = 8/422 (1%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +V  LC+ GNV  A+++   M D     +  TY++L+ GLC  G +++++  LD +  +G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN   ++ L+ A  K+  +  A KL+D++  KG  PN V+YN L+ GLC +G+ ++A+
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
                + +    PN +++  L+      GR  +   +L  ++         +Y+ LI  L
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK +H +++  EMV+   +P+   Y+ +I  LC EGK D   + L +M ++   PN 
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 379 GTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            TY+ L  + G    G + +A  + + + +   +  +  Y  +I  LC+ GK  +A  + 
Sbjct: 246 FTYSSL--MWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVW 303

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK--PDVDNFNALLLGLC 493
            +M   G   D   YSS+I G C   L+E+ +++F  M  ++ K  PDV  +N LL   C
Sbjct: 304 KQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFC 363

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA-HQDELELSAEVLKELQLRQVVSES 552
                  ++++   M+++G  P+  T  I ++ +  + D  +   E L EL +R +  + 
Sbjct: 364 TKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQR 423

Query: 553 AV 554
            V
Sbjct: 424 TV 425



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 217/454 (47%), Gaps = 31/454 (6%)

Query: 102 TNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           + L++ LC   ++ +A+ +++ M   G  P+  ++  L++ LCKKG++  A +LV+ M  
Sbjct: 39  STLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFL 98

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   N VTYNSLV GLC+ G L++++  L+R++    VPN  T+  L++   K      
Sbjct: 99  KGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALD 158

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
            +++L  +  KG + N  SY+ L++GL KEG+ E  ++ ++++  KG +PN + Y+ L+ 
Sbjct: 159 GVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALID 218

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC EG+ +EA E L EM     +P   TY+ L+      G    A+ V  EM       
Sbjct: 219 GLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNH 278

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
               Y+ +I  LC  GK+   +    QM  R  K +   Y+ +    C    V++   + 
Sbjct: 279 HEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLF 338

Query: 401 -QSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            Q L +     P    Y  ++ + C K    +A  +L  M   G  PD  T    ++ L 
Sbjct: 339 NQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL- 397

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNF-NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
                          +  D   D   F + L++ L K +RT  +  + ++M++K  +P  
Sbjct: 398 --------------RDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKP 443

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +T+ + V+            ++ K +++R+ +SE
Sbjct: 444 STWALAVQ------------QLCKPMKVRKTISE 465



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 113/233 (48%), Gaps = 36/233 (15%)

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
           PI+  LC  G VD  V+    M  R C  +  TY+ L   LC  G++ EA +++  +  +
Sbjct: 5   PIVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVE 64

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   +  +I++LC+KG   +A +L+  M   G  P+  TY+SL+ GLC++G +++A
Sbjct: 65  GTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKA 124

Query: 467 L-----------------------------------EIFVVMEEYDYKPDVDNFNALLLG 491
           +                                    + V +EE  Y+ +  ++++L+ G
Sbjct: 125 MSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISG 184

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           L K  + +  +++++ M+EKG  PN   Y+ L++G+  + + + + E L E++
Sbjct: 185 LFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMK 237



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 2/180 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R+ K ++A   L  M +KGH P+    ++L++   +A  + KAI V + M  +   
Sbjct: 218 DGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCN 277

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
                Y+ L+N LCK G +  A+ + ++M   G   + V Y+S++ G C    + Q ++ 
Sbjct: 278 HHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKL 337

Query: 191 LDRLI--QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
            ++++     L P+  TY+ LL A   +  V  A+ +L+ ++ +G  P+ ++ ++ L  L
Sbjct: 338 FNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 397


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 162/295 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  +++DA   +E M ++G KPD      +L  LC+  K+++A  + E MV   I P+  
Sbjct: 21  KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 80

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N LCK   +  A +L ++M   GY    V+YN+L+ G C   +L  +    D++
Sbjct: 81  TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 140

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++   VPN  TY+ L++   K   V AA ++LD ++ KG  PN+ +Y+ L+ G CK  R 
Sbjct: 141 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 200

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA +    + ++G  P VV+YNILL SLC   + E+A +L   M      PT+VTYN L
Sbjct: 201 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 260

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           + +L +H + D A ++  EM+     P A +Y+ +   L   GKV    + +++M
Sbjct: 261 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 1/309 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD +    ++  LCK  ++  A+  +E M + GI PDA  Y ++++ LC++  V  A  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            EKM       N VTYN+L+ GLC    +  + +    +  KG VP   +Y+ L++   K
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           ++ + AA  + D ++     PN+V+Y  L+ GL K G+ + A      +  KG  PNV +
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ L+   C   R +EA++LL +M     +PT+VTYNIL+ SL    K + A K+   M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           + R  P+  +YN ++  LC   ++D   +   +M  + C P+  TY+ LA  L   GKV 
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 395 EAFAIIQSL 403
           EA  +++ +
Sbjct: 307 EAQELMEKM 315



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 1/311 (0%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P + +TY  +V  LC    ++ +L  ++ +  +G+ P+AF Y+F+L    +E  V  A  
Sbjct: 6   PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           L + ++ +   PN+V+YN L+ GLCK  R E A   F+++  KG+ P  VSYN L+   C
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
            +     A ++  +M   +  P +VTY  LI  L+  GK   A +VLD MVK    P+ A
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL 403
           +Y+ +I   C   +VD   K L+QM  +   P   TYN L   LC   K+++AF + + +
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
             ++       Y  ++ +LC   +   A +L  EM   G  PD+ TY +L  GL   G +
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 305

Query: 464 EEALEIFVVME 474
            EA E+   M+
Sbjct: 306 HEAQELMEKMK 316



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 1/317 (0%)

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +A+   P+ ++Y  ++  LCK  R ++A+    ++ ++G +P+   YN +L  LC E + 
Sbjct: 1   MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           EEA  L  +M     +P +VTYN LI  L    + + A ++  EM    + P+  SYN +
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQN 408
           I   C +  +       D+M    C PN  TY  L   L   GKVQ A  ++  +  K  
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           +     Y  +I   C+  +  +A +LL +M   G  P   TY+ L+  LC    +E+A +
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +F  M +    P V  +N LL  LC  ++ D +  ++  MI KG  P+  TY  L  G+ 
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 300

Query: 529 HQDELELSAEVLKELQL 545
              ++  + E++++++L
Sbjct: 301 RAGKVHEAQELMEKMKL 317



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 1/243 (0%)

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P  +TY  ++  L    + D AL  ++EM     +P A  YN +++ LC E KV+     
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
            ++M  +R  PN  TYN L   LC   +++ A+ + + +  K     +  Y  +I   C+
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           K     A  +  +M +    P+  TY++LI GL   G ++ A E+   M +    P+V  
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++ L+ G CK RR D + ++ + M+ +G  P   TY IL+  +   D+LE + ++ + + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 545 LRQ 547
            R+
Sbjct: 247 QRR 249



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 79/159 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+  A   L+ MV KG  P+V   + L+   CK  ++ +A K++E MV+ GI 
Sbjct: 157 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 216

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +Y  L+N LC+   +  A +L   M         VTYN+L+R LC    L+ + + 
Sbjct: 217 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 276

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
              +I KG  P+A TY  L     +   VH A +L++ +
Sbjct: 277 YAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 209/450 (46%), Gaps = 35/450 (7%)

Query: 76  DHKLNDAFLQLERMV-SKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++K+ DA +  +++V  K  +P+ V    ++  L K    +K + ++ +M      PD  
Sbjct: 145 ENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVR 204

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++ LCK  N+  A+ L+ +M+    P N  TYNSL+ GLC LG   +    L  +
Sbjct: 205 TYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM 264

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +   + PN  T+S L++   KE  V  A +++  +I KG +P++++Y+ ++ G C  G+ 
Sbjct: 265 VNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQV 324

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A R F  L  KG +PN+ SY+IL+   C +    +A +L  E+      P  VTY+ +
Sbjct: 325 DRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTI 384

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G+   A K+ DEM++    P    ++ ++                        
Sbjct: 385 LHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLF----------------------- 421

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
               G +         G V+EA  +   L   +  +   FY  VI  LC+  +  +A  +
Sbjct: 422 ----GYFK-------YGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAI 470

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             ++   G  PD  TY+ +I G C EGL +E   I   ME+     +   +N ++ G  +
Sbjct: 471 FEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFR 530

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           S +    +   + M  +G   + TT  +L+
Sbjct: 531 SNKISEIVSFMKEMAGRGFSFDATTTGVLI 560



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/491 (24%), Positives = 224/491 (45%), Gaps = 8/491 (1%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA     RMV     P V+  + L   +         + +   M   GI    S    
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           + N  C +  +  A  ++      G P N VT+N+L+ GL     +  ++    +L+++ 
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 199 LV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           +  PN   Y  ++    K       + LL  +     KP++ +Y++++  LCK+   + A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I    ++  K   PN+ +YN L+  LC  G+WE+   LL+EM   + +P + T++ILI  
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   GK + A +V+  M++    P   +Y+ I+   C  G+VD   +  + +  +  KPN
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 378 EGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             +Y    NG      + K  + F  I   G K ++     Y  ++  L   G+   A +
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT---YSTILHGLIEVGRIGDAKK 399

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +  EM + G TPD   +S+L+ G    GL+EEA+ +F  +E      ++  +  ++ GLC
Sbjct: 400 IFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLC 459

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           K+ R   +  +F+ +   G +P+  TY +++ G   +   +    +L++++     + + 
Sbjct: 460 KNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNI 519

Query: 554 VERLVMQYDFE 564
              ++MQ  F 
Sbjct: 520 TYNVIMQGFFR 530



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 159/312 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  L+ A   L  M  K   P++    +L+  LCK  + +K   ++  MV+  I 
Sbjct: 211 DALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNIN 270

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +++ L++ LCK+G V  A +++  M + G   + +TY++++ G C+ G ++++ + 
Sbjct: 271 PNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRV 330

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            + L  KG+ PN F+YS L+    K++ +  AM+L  +I  KG KP+ V+Y+ +L GL +
Sbjct: 331 FNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIE 390

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR  +A + F ++   G  P++  ++ LL      G  EEA  L ++++       I  
Sbjct: 391 VGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISF 450

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y ++I  L  + +   A  + +++      P   +YN +I   C EG  D V   L +M 
Sbjct: 451 YTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKME 510

Query: 371 HRRCKPNEGTYN 382
              C  N  TYN
Sbjct: 511 DNGCPANNITYN 522



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 140/279 (50%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ DA   +  M+ KG +PD++  + ++   C   ++ +A +V  ++   GI P+  
Sbjct: 285 KEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIF 344

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY+ L+N  CKK N+  AMQL  ++   G   +TVTY++++ GL  +G +  + +  D +
Sbjct: 345 SYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEM 404

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++ G  P+   +S LL   +K   V  AM L   +       N+  Y V++ GLCK  R 
Sbjct: 405 LRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRV 464

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA   F  LPS G  P+V +YN+++   C EG ++E   +L +M+        +TYN++
Sbjct: 465 REAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVI 524

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +       K    +  + EM    F   A +   +I  L
Sbjct: 525 MQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 208/442 (47%), Gaps = 1/442 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
             RM +    P       LL+ L K+   +   K    M+ +GI P   +Y  +++ LCK
Sbjct: 183 FSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCK 242

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G++  + +L  +M + G   + VTYNSL+ G   +G+L +     + +   G VP+  T
Sbjct: 243 EGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIIT 302

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    K   +  A +   ++   G KPN+V+Y+ L+   CKEG  + AI+   D+ 
Sbjct: 303 YNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMR 362

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G  PN  +Y  L+ + C  G   EA +LL +M        IVTY  L+  L   G+  
Sbjct: 363 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 422

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A +V   M+K    P+   Y  ++       +++  +K L QM     KP+   Y  + 
Sbjct: 423 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 482

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C   K++E   I++ + ++  S+       +I +  + GK+  A     EM   G  
Sbjct: 483 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 542

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
               TY  LI GLC  G++E A++ F  M     +P+V  + +L+ GLC +   + + ++
Sbjct: 543 ATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKL 602

Query: 505 FQMMIEKGQMPNETTYTILVEG 526
           F  M  +G  P+ T +T L++G
Sbjct: 603 FDEMQCRGMTPDITAFTALIDG 624



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 203/467 (43%), Gaps = 1/467 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+  G  P V     ++  LCK   ++ + ++   M   G+ PD  +Y  L++   K G+
Sbjct: 221 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 280

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +     L  +M+D G   + +TYN L+   C    + ++ ++   +   GL PN  TYS 
Sbjct: 281 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 340

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L++A  KE  +  A+KLL D+   G  PN  +Y  L+   CK G   EA +   D+   G
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            + N+V+Y  LL  LC  GR  EA E+   M     SP    Y  L+       + + A+
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           K+L +M +   +P    Y  II   CS+ K++     L++M  R    N      +    
Sbjct: 461 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 520

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
              GK  +A    Q + +    +    Y  +I  LC  G    A      M   G  P+ 
Sbjct: 521 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNV 580

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
             Y+SLI GLC    IE A ++F  M+     PD+  F AL+ G  K      +L +   
Sbjct: 581 AVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISR 640

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           M E     +   YT LV G +   EL  + +   E+  + ++ E  +
Sbjct: 641 MTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVL 687



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 226/492 (45%), Gaps = 31/492 (6%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F+Q+  M   G  PDVV   +L+    K   +++   +   M   G +PD  +Y  L+NC
Sbjct: 253 FVQMREM---GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 309

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            CK   +  A +   +M++ G   N VTY++L+   C  G +  +++ L  + + GL+PN
Sbjct: 310 YCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPN 369

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            FTY+ L++A  K   +  A KLL+D++  G K N+V+Y  LL GLCK GR  EA   FR
Sbjct: 370 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 429

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +   G  PN   Y  L+       R E+A ++L +M   +  P ++ Y  +I       
Sbjct: 430 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR 489

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE-----GKVDLVVKCLDQMFHRRCKPN 377
           K +    +L+EM     +    S NP+I+    +     GK    +    +M     +  
Sbjct: 490 KLEETKLILEEM-----KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEAT 544

Query: 378 EGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             TY  L   LC  G V+ A   F  + SLG + N +    Y  +I  LC       A +
Sbjct: 545 IVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVA---VYTSLIDGLCXNNCIESAKK 601

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM   G TPD   +++LI G    G ++EAL +   M E   + D+  + +L+ G  
Sbjct: 602 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFS 661

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           +      + + F  MIEKG +P E     L+     + +L+ + E+  E+          
Sbjct: 662 QCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM---------- 711

Query: 554 VERLVMQYDFEG 565
            ER+   ++F+ 
Sbjct: 712 -ERMAYSFEFDA 722



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 191/410 (46%), Gaps = 5/410 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            K+  AF     M + G KP+VV  + L+   CK   M+ AIK++  M  +G++P+  +Y
Sbjct: 314 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTY 373

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L++  CK GN+  A +L+  M   G   N VTY +L+ GLC  G + ++ +    +++
Sbjct: 374 TSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 433

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+ PN   Y+ L+    K   +  AMK+L  +     KP+L+ Y  ++ G C + + EE
Sbjct: 434 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 493

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
                 ++ S+G   N V    ++ +    G+  +A     EM       TIVTY +LI 
Sbjct: 494 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 553

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   G  + A+     M+    +P+ A Y  +I  LC    ++   K  D+M  R   P
Sbjct: 554 GLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTP 613

Query: 377 NEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +   +   A++ G    G +QEA  +I  +           Y  +++   + G+ +QA +
Sbjct: 614 DITAFT--ALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK 671

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
              EM + G  P+      L+R     G ++EA+E+   ME   Y  + D
Sbjct: 672 FFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFD 721



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 195/418 (46%), Gaps = 1/418 (0%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P A S  +L++ L K GN     +    M   G   +  TYN ++  LC  G+L  S +
Sbjct: 192 LPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRR 251

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
              ++ + GL P+  TY+ L++   K   +     L +++   G  P++++YN L+   C
Sbjct: 252 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC 311

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K  +   A  +F ++ + G +PNVV+Y+ L+ + C EG  + A +LL +M      P   
Sbjct: 312 KFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEF 371

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  LI +    G    A K+L++M++   + +  +Y  ++  LC  G++    +    M
Sbjct: 372 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                 PN+  Y  L        ++++A  I++ +           Y  +I   C + K 
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 491

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +   +L EM   G + +    +++I      G   +AL  F  M++   +  +  +  L
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
           + GLC++   +L+++ F  M+  G  PN   YT L++G+   + +E + ++  E+Q R
Sbjct: 552 IDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR 609



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 169/368 (45%), Gaps = 7/368 (1%)

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
           LG L ++ +   R+     +P A + +FLL    K        K  +D+I  G  P++ +
Sbjct: 173 LGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFT 232

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           YNV++  LCKEG  E + R F  +   G  P+VV+YN L+      G  EE   L  EM 
Sbjct: 233 YNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 292

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P I+TYN LI       K   A +   EM     +P+  +Y+ +I   C EG + 
Sbjct: 293 DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQ 352

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSL---GNKQNSSPQEFYK 416
             +K L  M      PNE TY  L    C  G + EA+ ++  +   G K N      Y 
Sbjct: 353 GAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT---YT 409

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            ++  LC+ G+  +A ++   M K G +P+   Y++L+ G      +E+A++I   M E 
Sbjct: 410 ALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC 469

Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
           + KPD+  + +++ G C  R+ + +  + + M  +G   N    T +++      +   +
Sbjct: 470 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 529

Query: 537 AEVLKELQ 544
               +E+Q
Sbjct: 530 LNFFQEMQ 537



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 174/382 (45%), Gaps = 30/382 (7%)

Query: 17  EPFRKAYGFYSQI------PNLHSFS----------LNKGFIRVLASTQVT-ISPKDSVY 59
           E   +A+ ++S++      PN+ ++S          + +G I++L   + T + P +  Y
Sbjct: 314 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTY 373

Query: 60  TK---PNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKK 116
           T     N K GN          L +A+  L  M+  G K ++V  T LL  LCKA +M +
Sbjct: 374 TSLIDANCKAGN----------LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIE 423

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A +V   M+  GI P+   YT LV+   K   +  AM+++++M +     + + Y S++ 
Sbjct: 424 AEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 483

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           G C    L ++   L+ +  +G+  N    + +++A +K      A+    ++   G + 
Sbjct: 484 GHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 543

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
            +V+Y VL+ GLC+ G  E A+ +F  + S G +PNV  Y  L+  LC     E A +L 
Sbjct: 544 TIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLF 603

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM     +P I  +  LI     HG    AL ++  M +         Y  +++     
Sbjct: 604 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 663

Query: 357 GKVDLVVKCLDQMFHRRCKPNE 378
           G++    K  ++M  +   P E
Sbjct: 664 GELHQARKFFNEMIEKGILPEE 685



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 34/176 (19%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           RM+S G +P+V   T+L+  LC  N ++ A K+ + M   G+ PD +++T L++   K G
Sbjct: 570 RMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHG 629

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN----- 202
           N+  A+ L+ +M +     +   Y SLV G    G L+Q+ +F + +I+KG++P      
Sbjct: 630 NLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCI 689

Query: 203 -------------------------AFTYSFLLEAAYKERGV----HAAMKLLDDI 229
                                    A+++ F  + AY E+GV    HA + L  DI
Sbjct: 690 CLLREYYKRGQLDEAIELKNEMERMAYSFEFDAQLAYNEQGVNLTLHAYLYLKFDI 745



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K +DA    + M   G +  +V    L+  LC+A  ++ A+     M+S G+ 
Sbjct: 518 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQ 577

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+ + YT L++ LC    +  A +L ++M+  G   +   + +L+ G    GNL ++L  
Sbjct: 578 PNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL 637

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           + R+ +  +  +   Y+ L+    +   +H A K  +++I KG  P  V    LL    K
Sbjct: 638 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYK 697

Query: 251 EGRTEEAI 258
            G+ +EAI
Sbjct: 698 RGQLDEAI 705


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 214/446 (47%), Gaps = 14/446 (3%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGI 129
           D   + ++L DA   LE M   G  PDVV  T L+   CK   +++A ++  EM+ S+  
Sbjct: 19  DALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIFQEMIKSNRC 78

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKME-DYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
            PD   Y  L++  CK+  +  A++L+ +M  +     + V YNS+V GLC      ++ 
Sbjct: 79  QPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAW 138

Query: 189 QFLDR-LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTG 247
           +FLD  ++++G  P   TY+ L+  A K + +  AM + + ++ +  +P +VSY+V++ G
Sbjct: 139 KFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDG 198

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
           L K GR  +A R  R++ + G E NVV Y  L+  LC  G  ++A  L   M      P 
Sbjct: 199 LSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPN 258

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
             TY  LI +   + +T+ AL + D  ++       A Y  +++ LC E ++D       
Sbjct: 259 QRTYATLIDTFCRNDRTETALGLFDH-IRDYCPLDVAMYTAVVSGLCRERRLDDARALFR 317

Query: 368 QMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLC 423
           +M       +   YN   +L G    G+ +EAF I++ LG+          Y  VI   C
Sbjct: 318 EMRLAGVSADTHAYN--VLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCC 375

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
            +        L YEM + G  PD  TYS+LI  L   G I  A ++   M      P   
Sbjct: 376 LE----SGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSG 431

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMI 509
               ++  LC SRR DL+ ++ +M +
Sbjct: 432 VLGRVVARLCWSRRGDLAAKLIEMAM 457



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 157/332 (47%), Gaps = 5/332 (1%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           PN  ++  L+  L K  R  +A R    +   G  P+VV++  L+R  C     E A E+
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 296 LAEMDGGDR-SPTIVTYNILIGSLAYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARL 353
             EM   +R  P    Y +LI       + D AL++L EM V+ R +P    YN I+  L
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 354 CSEGKVDLVVKCLDQ-MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
           C   +     K LD+ M  + C P   TY  L    C   K++ A  I  ++  ++    
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
              Y  +I  L + G+ Y A++++ EM   G   +   Y++LI GLC  G +++A  ++ 
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYR 248

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
           +M+     P+   +  L+   C++ RT+ +L +F  + +   + +   YT +V G+  + 
Sbjct: 249 IMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPL-DVAMYTAVVSGLCRER 307

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            L+ +  + +E++L  V +++    +++   F
Sbjct: 308 RLDDARALFREMRLAGVSADTHAYNVLLHGAF 339


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 231/505 (45%), Gaps = 29/505 (5%)

Query: 76  DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPD 132
           + + +DA  + L RM   G  PDV   T LL  LC   K ++A +++ MM   G    P+
Sbjct: 192 EKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPN 251

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             SYT +++   K+G+VG A  L  KM D+G P N VT NS++ GLC +  ++++   L 
Sbjct: 252 VVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 311

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++I + ++PN  TY+ L+           A+++L ++   G +PN+V+Y++L+  LCK G
Sbjct: 312 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSG 371

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              EA   F  +   G +PN  +Y  LL     EG   + N +   M      P    +N
Sbjct: 372 LHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFN 431

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
           I I +    G+ D A    ++M +  F P   +Y  +I  LC  G++D  +    QM   
Sbjct: 432 IEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDD 491

Query: 373 RCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
              P+  T+N    G A+     K +E F  +   G   N +    +  +I  L ++GK 
Sbjct: 492 GLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNT---FNSMIDKLFKEGKV 548

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A +L   M + G  P+  +Y+++I G  + G + E +++   M     KP    FN L
Sbjct: 549 TEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTL 608

Query: 489 LLGL-------------------CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
           L G+                   C+  R +  L +F+ M+ K    +  T  I + G+  
Sbjct: 609 LDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTV 668

Query: 530 QDELELSAEVLKELQLRQVVSESAV 554
           +     S+ V+    L  V    A+
Sbjct: 669 KASYHCSSVVISLKALEVVTQAGAI 693



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 210/448 (46%), Gaps = 4/448 (0%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F ++ R  +K   PD+     L+   C A  +      +  ++ +G+   A ++T L+  
Sbjct: 129 FNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRT 188

Query: 143 LCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG--L 199
           LC +     AM +V  +M + G   +  +Y +L++GLC      ++ + +  + + G   
Sbjct: 189 LCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNC 248

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PN  +Y+ ++   +KE  V  A  L   ++  G  PN+V+ N ++ GLCK    ++A  
Sbjct: 249 PPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEA 308

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
             + +  +   PN  +YN L+      G+W EA  +L EM    + P +VTY++LI  L 
Sbjct: 309 VLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLC 368

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G    A ++ + M++   +P+A++Y  ++    +EG +  +    D M     +P   
Sbjct: 369 KSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRH 428

Query: 380 TYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
            +N  +   C  G++ EA      +  +        Y  VI  LC+ G+   A     +M
Sbjct: 429 VFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQM 488

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G +PD  T+++LI G  + G  E+A E+F  M +    P+V+ FN+++  L K  + 
Sbjct: 489 IDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKV 548

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEG 526
             + ++F +M   G  PN  +Y  ++ G
Sbjct: 549 TEARKLFDLMPRAGAKPNVVSYNTMIHG 576



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 165/446 (36%), Gaps = 84/446 (18%)

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYK-------ERGVHAAMKLLDDIIAKGGK---P 236
           +L   D L+Q+    + +  + LL    +         G   A+ + + +   G K   P
Sbjct: 83  ALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAP 142

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR-------- 288
           ++ ++ +L++  C  G           +   G     V++  LLR+LC E R        
Sbjct: 143 DIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIV 202

Query: 289 ----------------------------WEEANELLAEM--DGGDRSPTIVTYNILIGSL 318
                                        EEA EL+  M  DG +  P +V+Y  +I   
Sbjct: 203 LRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGF 262

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G    A  +  +M+     P+  + N +I  LC    +D     L QM      PN 
Sbjct: 263 FKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNC 322

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L       G+  EA  I++ +           Y  +I  LC+ G   +A ++   
Sbjct: 323 TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNS 382

Query: 438 MTKYGFTPDSYTYSSLIRG-----------------------------------LCMEGL 462
           M + G  P++ TY SL+ G                                    C  G 
Sbjct: 383 MIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGR 442

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++EA   F  M++  + PD+  +  ++ GLCK  R D ++  F  MI+ G  P+  T+  
Sbjct: 443 LDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNT 502

Query: 523 LVEGIAHQDELELSAEVLKELQLRQV 548
           L+ G A   + E + E+  E+  R +
Sbjct: 503 LIHGFALHGKWEKAEELFYEMMDRGI 528



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 5/266 (1%)

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVV 363
           +P I T+ ILI      G  +     L +++K   R  A ++ P++  LC+E +  D + 
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VIT 420
             L +M    C P+  +Y  L   LC   K +EA  +I  +    ++ P     Y  VI 
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
              ++G   +A+ L  +M  +G  P+  T +S+I GLC    +++A  +   M +    P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +   +N+L+ G   S +   ++ + + M   GQ PN  TY++L++ +        + E+ 
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF 380

Query: 541 KEL-QLRQVVSESAVERLVMQYDFEG 565
             + Q  Q  + S    L+  Y  EG
Sbjct: 381 NSMIQSGQKPNASTYGSLLHGYATEG 406


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 223/463 (48%), Gaps = 2/463 (0%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F +++R       P +     L+    +A +    + V   ++ +G+ PD  SY  L++ 
Sbjct: 174 FKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDG 233

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K+G V  A  L  KME+ G   N VTY+SL+ GLC    ++++ + L +++  G+ PN
Sbjct: 234 FSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPN 293

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+           ++++  ++ +    P++ + N  +T LCK GR +EA   F 
Sbjct: 294 NMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFD 353

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  KG +P+V+SY  LL      G     + L   M      P    +N LI + A  G
Sbjct: 354 SMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLG 413

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             D +L + ++M K    P   +++ +I+  C  G++D  ++  + M      P+   Y+
Sbjct: 414 MMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYS 473

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSP-QEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
            L    C    + +A  +I  + +K    P  +F+  +I +LC++G+  +   ++  +  
Sbjct: 474 CLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH 533

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P+  T++SL+ G C+ G ++EA+ +   ME    +PD+  +N L+ G CK  R D 
Sbjct: 534 TGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 593

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +L +F+ M+ K       +Y I++ G+       ++ E+  E+
Sbjct: 594 ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 219/483 (45%), Gaps = 35/483 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A    + MV KG KPDV+    LL+    A  +     +  +MV  G++PD   + 
Sbjct: 344 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 403

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N   + G +  ++ + E M   G   + +T+++++   C LG L+ +++  + +I  
Sbjct: 404 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 463

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY-NVLLTGLCKEGRTEE 256
           G+ P+   YS L++     R +  A +L+ D+++KG  P  + +   ++  LCKEGR  E
Sbjct: 464 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAE 523

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
                  +   G  PN++++N L+   C+ G  +EA  LL  M+     P I TYN L+ 
Sbjct: 524 GKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVD 583

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
               HG+ D AL +  +M+  R   ++ SYN I+  L  + +  +V K   +MFH     
Sbjct: 584 GYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL-FQARRTIVAK---EMFH----- 634

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            E   +G+A+                            Y  V+  LCR   T +A  LL 
Sbjct: 635 -EMIESGMAV------------------------SIHTYATVLGGLCRNNCTDEANMLLE 669

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           ++       D  T++ +IR +   G  +EA E+F  +  Y   P +  +  ++  L K  
Sbjct: 670 KLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 729

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
             + +  +F  M +    P+      ++  + ++ E+  +   L ++  + ++ E+    
Sbjct: 730 SFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTS 789

Query: 557 LVM 559
           L++
Sbjct: 790 LLI 792



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 210/458 (45%), Gaps = 2/458 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R++  G  PDV     L+    K  ++ KA  +   M   GI+P+  +Y+ L+N LCK  
Sbjct: 214 RLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTK 273

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A +++ +M   G   N +TYN L+ G    G   +S++    +    LVP+    +
Sbjct: 274 EMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCN 333

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             + A  K   +  A  + D ++ KG KP+++SY  LL G    G        F  +  +
Sbjct: 334 SFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCE 393

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+   +N L+ +    G  +++  +  +M     +P I+T++ +I +    G+ D A
Sbjct: 394 GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDA 453

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY--NGLA 385
           ++  + M+     P  A Y+ +I   C+   +    + +  M  +   P    +  + + 
Sbjct: 454 MEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIIN 513

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G+V E   ++  + +         +  ++   C  G   +A  LL  M   G  P
Sbjct: 514 NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEP 573

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D YTY++L+ G C  G I++AL +F  M          ++N +L GL ++RRT ++ E+F
Sbjct: 574 DIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMF 633

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             MIE G   +  TY  ++ G+   +  + +  +L++L
Sbjct: 634 HEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 671



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/471 (21%), Positives = 225/471 (47%), Gaps = 2/471 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +MV  G +P+ +    L++    +   K++++V + M SS ++PD  +    +  LCK
Sbjct: 282 LRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 341

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A  + + M   G   + ++Y +L+ G    G +       + ++ +G+VP+   
Sbjct: 342 HGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV 401

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+ A  +   +  ++ + +D+  +G  P++++++ +++  C+ GR ++A+  F  + 
Sbjct: 402 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 461

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKT 324
             G  P+   Y+ L++  C      +A EL+++M   G   P I  +  +I +L   G+ 
Sbjct: 462 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 521

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
                V+D ++    RP+  ++N ++   C  G +   V  LD M     +P+  TYN L
Sbjct: 522 AEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTL 581

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C  G++ +A  + + + +K+ +     Y  ++  L +  +T  A ++ +EM + G 
Sbjct: 582 VDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGM 641

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
               +TY++++ GLC     +EA  +   +   + K D+  FN ++  + K  R   + E
Sbjct: 642 AVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKE 701

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           +F  +   G +P   TY +++  +  ++  E +  +   ++      +S +
Sbjct: 702 LFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 752



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 171/368 (46%), Gaps = 4/368 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS-Y 136
           +L+DA  +   M+  G  PD    + L+   C    + KA +++  M+S GI P     +
Sbjct: 449 RLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFF 508

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T ++N LCK+G V     +V+ +   G   N +T+NSLV G C++GN+ +++  LD +  
Sbjct: 509 TSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES 568

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+ P+ +TY+ L++   K   +  A+ L  D++ K      VSYN++L GL +  RT  
Sbjct: 569 VGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIV 628

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F ++   G   ++ +Y  +L  LC     +EAN LL ++   +    I+T+NI+I 
Sbjct: 629 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIR 688

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           ++   G+   A ++   +      P+  +Y  +I  L  E   +        M    C P
Sbjct: 689 AMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTP 748

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +    N +  ML   G+V +A   +  +  K           +I      GK  +  +LL
Sbjct: 749 DSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 808

Query: 436 YEMTKYGF 443
            E  KY F
Sbjct: 809 PE--KYRF 814



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 38/300 (12%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ ++  G +P+++   +L+   C    MK+A+ +++ M S G+ PD  +Y  LV+  CK
Sbjct: 528 VDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCK 587

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL--------------------------- 178
            G +  A+ L   M        +V+YN ++ GL                           
Sbjct: 588 HGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHT 647

Query: 179 --CMLGNL------NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
              +LG L      +++   L++L    +  +  T++ ++ A +K      A +L   I 
Sbjct: 648 YATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIS 707

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
             G  P +++Y V++T L KE   E+A   F  +      P+    N ++R L  +G   
Sbjct: 708 TYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVA 767

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF-RPSAASYNPI 349
           +A   L+++D     P   T ++LI   + +GK    +K+L E  K RF R  AA  N I
Sbjct: 768 KAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE--KYRFLREQAAVDNCI 825



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 116/275 (42%), Gaps = 4/275 (1%)

Query: 28  QIPNLHSF-SLNKGFIRV--LASTQVTISPKDSVYTKPNRKPGNN-NDTRHRDHKLNDAF 83
           Q PNL +F SL  G+  V  +      +   +SV  +P+    N   D   +  +++DA 
Sbjct: 536 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 595

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
                M+ K      V    +L+ L +A +   A ++   M+ SG+     +Y  ++  L
Sbjct: 596 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 655

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           C+      A  L+EK+       + +T+N ++R +  +G   ++ +    +   GLVP  
Sbjct: 656 CRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTI 715

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY  ++    KE     A  L   +      P+    N ++  L  +G   +A  +   
Sbjct: 716 LTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSK 775

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           +  KG  P   + ++L+    + G++ E  +LL E
Sbjct: 776 IDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 219/476 (46%), Gaps = 25/476 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            ++A   L RM      P+VV    LL    K  ++    +++ MM++ G  P+ S +  
Sbjct: 292 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 351

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD------ 192
           LV+  C + +  YA +L+ +M   G P   V YN  +  +C    L  S   LD      
Sbjct: 352 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL-PSPDLLDLAEKIY 410

Query: 193 -RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++    V N    +              A +L+ +++ KG  P+  +Y+ ++T LC  
Sbjct: 411 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 470

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            + E+A   F+++   G  P+V +Y IL+ S C  G  E+A  L  EM     SPT+VTY
Sbjct: 471 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 530

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVKCL- 366
             LI +     +   A  +   MV    RP+  +Y  ++  LC  G +    ++  K + 
Sbjct: 531 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 590

Query: 367 -----DQMFHRRCK------PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
                D  F+  C+      PN  TY  L   LC   KV  A  ++ ++ +         
Sbjct: 591 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 650

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           Y  +I   C+ GK   A ++  +MTK G+ P  +TY+SLI  +  +G ++ A+++   M 
Sbjct: 651 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 710

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
           +    P+V  + A++ GLC+   ++ +L++  +M EKG  PN  TYT L++G+   
Sbjct: 711 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 227/510 (44%), Gaps = 32/510 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +  DA   +ER   +  K D V  T+++  L +A+   +A+  +  M  +  IP+  
Sbjct: 256 KEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVV 312

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++   KK  +G+  +++  M   G   N   +NSLV   C   +   + + L+R+
Sbjct: 313 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 372

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHA------AMKLLDDIIAKGGKPNLVSYNVLLTGL 248
              G  P    Y+  + +   +  + +      A K+  +++A     N V+       L
Sbjct: 373 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 432

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C  G+ ++A +  +++  KGF P+  +Y+ ++  LC   + E+A  L  EM     +P +
Sbjct: 433 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 492

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            TY ILI S    G  + A  + +EM      P+  +Y  +I       +V        +
Sbjct: 493 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 552

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFY------------ 415
           M    C+PN+ TY  L   LC  G + +AF +   L    +S+  +FY            
Sbjct: 553 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 612

Query: 416 ----KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
                 ++  LC+  K   A +LL  M   G  P+   Y +LI G C  G I+ A E+F+
Sbjct: 613 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 672

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M +  Y P V  + +L+  + K  R DL+++V   M++    PN  TYT +++G+    
Sbjct: 673 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 732

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVMQY 561
           E E      K L+L  ++ E      V+ Y
Sbjct: 733 ESE------KALKLLSLMEEKGCSPNVVTY 756



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 218/492 (44%), Gaps = 26/492 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R    N+A  +L R+   G++P  V    L+  L  A ++    +V + M  SG   D  
Sbjct: 186 RGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRF 245

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +     + LCK+G    A+ ++E+ ED  +  +TV    ++ GL      ++++ FL R+
Sbjct: 246 TVGCFAHALCKEGRWADALDMIER-ED--FKLDTVLCTHMISGLMEASYFDEAMSFLHRM 302

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
                +PN  TY  LL    K++ +    ++++ ++ +G  PN   +N L+   C E   
Sbjct: 303 RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 362

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR------WEEANELLAEMDGGDRSPTI 308
             A +    + + G  P  V YNI + S+C + +       + A ++  EM   +     
Sbjct: 363 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 422

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           V        L   GK D A +++ EM++  F P  ++Y+ +I  LC   KV+       +
Sbjct: 423 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 482

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M      P+  TY  L    C  G +++A  + + + +   S     Y  +I +  +  +
Sbjct: 483 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 542

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-------------- 473
             QA  + + M   G  P+  TY +L+ GLC  G I +A E++  +              
Sbjct: 543 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 602

Query: 474 --EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
             + +   P+V  + AL+ GLCK+ + D + E+   M+  G  PN   Y  L++G     
Sbjct: 603 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 662

Query: 532 ELELSAEVLKEL 543
           +++ + EV  ++
Sbjct: 663 KIDSAQEVFLQM 674



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 186/413 (45%), Gaps = 12/413 (2%)

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           LV   C+ G    A++ + +++D+GY  + VTYN+LV+ L   G ++   +    + + G
Sbjct: 180 LVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESG 239

Query: 199 LVPNAFTYSFLLEAAYKE-RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              + FT      A  KE R   A    LD I  +  K + V    +++GL +    +EA
Sbjct: 240 FCMDRFTVGCFAHALCKEGRWADA----LDMIEREDFKLDTVLCTHMISGLMEASYFDEA 295

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           + F   +      PNVV+Y  LL     + +      ++  M     +P    +N L+ S
Sbjct: 296 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHS 355

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV------DLVVKCLDQMFH 371
                   +A K+L+ M      P    YN  I  +C + K+      DL  K   +M  
Sbjct: 356 YCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLA 415

Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             C  N+      A  LCGVGK  +AF +I+ +  K        Y  VIT LC   K  +
Sbjct: 416 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 475

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF L  EM   G TPD YTY+ LI   C  GLIE+A  +F  M      P V  + AL+ 
Sbjct: 476 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 535

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              K+++   + ++F  M++ G  PN+ TY  LV+G+     +  + EV  +L
Sbjct: 536 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 588



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 150/323 (46%), Gaps = 16/323 (4%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K + AF  ++ M+ KG  PD    + ++  LC A K++KA  + + M   G+ PD  +YT
Sbjct: 437 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 496

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK G +  A  L E+M   G     VTY +L+        + Q+     R++  
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK----------------PNLVSY 241
           G  PN  TY  L++   K   +  A ++   +I                     PN+V+Y
Sbjct: 557 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
             L+ GLCK  + + A      + S G EPN + Y+ L+   C  G+ + A E+  +M  
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676

Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
               P++ TY  LI  +   G+ D A+KVL +M+K    P+  +Y  +I  LC  G+ + 
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736

Query: 362 VVKCLDQMFHRRCKPNEGTYNGL 384
            +K L  M  + C PN  TY  L
Sbjct: 737 ALKLLSLMEEKGCSPNVVTYTAL 759



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 76/138 (55%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + HK++ A   L+ M+S G +P+ +    L+   CKA K+  A +V   M   G +P   
Sbjct: 625 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 684

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++ + K G +  AM+++ +M       N VTY +++ GLC +G   ++L+ L  +
Sbjct: 685 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 744

Query: 195 IQKGLVPNAFTYSFLLEA 212
            +KG  PN  TY+ L++ 
Sbjct: 745 EEKGCSPNVVTYTALIDG 762



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 150/358 (41%), Gaps = 55/358 (15%)

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y+ L   L  +GR  +A R  R++  +  E      N+L+R  C  G W EA E L  + 
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK 201

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK-- 358
                P+ VTYN L+  L+  G+ D   +V  EM +  F     +       LC EG+  
Sbjct: 202 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 261

Query: 359 --VDLV---------VKC-------------------LDQMFHRRCKPNEGTYNGLAMLC 388
             +D++         V C                   L +M    C PN  TY  L  L 
Sbjct: 262 DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL--LS 319

Query: 389 G------VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           G      +G  +    ++ + G   N S    +  ++ S C +     A++LL  MT  G
Sbjct: 320 GFLKKKQLGWCKRIINMMMTEGCNPNPS---LFNSLVHSYCNEKDYAYAYKLLNRMTTCG 376

Query: 443 FTPDSYTYSSLIRGLCME------GLIEEALEIFVVMEEYDY---KPDVDNFNALLLGLC 493
             P    Y+  I  +C +       L++ A +I+  M   +    K +V NF   L G+ 
Sbjct: 377 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 436

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           K    D + ++ + M+ KG +P+ +TY+ ++  + H  ++E +  + +E+++  V  +
Sbjct: 437 K---FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 491



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 5/281 (1%)

Query: 255 EEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
           E   RFF     + G+      Y+ L  +L  +GR  +A  LL E+   DR       N+
Sbjct: 120 ELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNV 179

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+      G  + AL+ L  +    +RPS  +YN ++  L S G+VDL  +   +M    
Sbjct: 180 LVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESG 239

Query: 374 CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              +  T    A  LC  G+  +A  +I+    K ++       ++I+ L       +A 
Sbjct: 240 FCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTV---LCTHMISGLMEASYFDEAM 296

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             L+ M      P+  TY +L+ G   +  +     I  +M      P+   FN+L+   
Sbjct: 297 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY 356

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           C  +    + ++   M   G  P    Y I +  I  Q++L
Sbjct: 357 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL 397



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 41/73 (56%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +L+ A   L +M+     P+VV  T ++  LC+  + +KA+K++ +M   G  
Sbjct: 691 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 750

Query: 131 PDASSYTYLVNCL 143
           P+  +YT L++ L
Sbjct: 751 PNVVTYTALIDGL 763


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 219/455 (48%), Gaps = 12/455 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +   L+ +      MV KG  P      NLL  +  ++   +  +       S I  D  
Sbjct: 106 QSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN---ESKIKVDLD 162

Query: 135 SYTY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
            Y++  ++   C+ G +  +  L+ ++ ++G+  N V Y +L+ G C  G + ++     
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFF 222

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            + + GLV N +TY+ L+   +K        ++ + +   G  PNL +YN ++   CK+G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDG 282

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           RT++A + F ++  +G   N+V+YN L+  LC E +  EAN+++ +M     +P ++TYN
Sbjct: 283 RTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYN 342

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI      GK   AL +  ++      PS  +YN +++  C +G      K + +M  R
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402

Query: 373 RCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             KP++ TY    +  A +  + K  +  + ++ LG   +      Y  +I   C KG+ 
Sbjct: 403 GIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHT---YSVLIHGFCIKGQM 459

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +A +L   M      P+   Y++++ G C EG    AL +F  MEE +  P+V ++  +
Sbjct: 460 NEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           +  LCK R++  +  + + MI+ G  P+++   ++
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 204/426 (47%), Gaps = 2/426 (0%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  ++N   +  ++  ++    +M D G+   +  +N+L+  +    + NQ  +F +   
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
            K +  + +++  +++   +   +  +  LL ++   G  PN+V Y  L+ G CK G  E
Sbjct: 157 IK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A   F ++   G   N  +Y +L+  L   G  ++  E+  +M      P + TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                 G+T  A K+ DEM +     +  +YN +I  LC E K +   K +DQM      
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           PN  TYN L    CGVGK+ +A ++ + L ++  S     Y  +++  C+KG T  A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           + EM + G  P   TY+ LI        +E+A+++   MEE    PDV  ++ L+ G C 
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             + + +  +F++M+ K   PN+  Y  +V G   +     +  + +E++ +++    A 
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 555 ERLVMQ 560
            R +++
Sbjct: 516 YRYMIE 521



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 26/279 (9%)

Query: 289 WEEANELLAEMDGGDRSPTIVT--------------------YNILIGSLAYHGKTDHAL 328
           +  A  LL ++  G       T                    Y ++I +       D ++
Sbjct: 55  YSHAQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSI 114

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAM- 386
              +EMV   F P +  +N ++  +      +   +  ++    + K +   Y+ G+ + 
Sbjct: 115 SYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE---SKIKVDLDVYSFGIVIK 171

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C  G+++++F ++  L     S     Y  +I   C++G+  +A  L +EM K+G   
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVA 231

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           + +TY+ LI GL   G+ ++  E++  M+E    P++  +N ++   CK  RT  + ++F
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLF 291

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             M E+G   N  TY  L+ G+  + +   + +V+ +++
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 64/132 (48%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           DT  R   +  A      M   G  PDV   + L++  C   +M +A ++ ++MV+  + 
Sbjct: 416 DTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLE 475

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  +V   CK+G+   A++L  +ME+   P N  +Y  ++  LC      ++   
Sbjct: 476 PNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGL 535

Query: 191 LDRLIQKGLVPN 202
           ++++I  G+ P+
Sbjct: 536 VEKMIDTGIDPS 547


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 209/446 (46%), Gaps = 6/446 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A+    +M  +G  P   + + +L  L    + K A+ + E M  SG+ PD  +Y  L++
Sbjct: 351 AYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIH 409

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C+   +  A+ L ++M+  G   +  TYNSL+ G C  G ++++++    +  +G  P
Sbjct: 410 WHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKP 469

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  TY  L+     ++    A  LLD++   G   N  +YNVL+ G+C   R  E     
Sbjct: 470 NVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGML 529

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
           +   S+GF P +++YN ++      G    A  +  +M      P I+TY   I      
Sbjct: 530 KSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRT 589

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G +D ALK+L+++ +   +P   +YN +I   C EG +   ++ L  +      PN   Y
Sbjct: 590 GCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVY 649

Query: 382 NGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           N L  + G   +  ++E     +S+      +    Y  +I    + G    A +L  EM
Sbjct: 650 NSL--ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEM 707

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G+ PD++T+++L  GLC  G I+ A ++   M   D +P+V  +N L+ G  +  + 
Sbjct: 708 MAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKL 767

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILV 524
             +  +   M+  G  P++TTY ILV
Sbjct: 768 QEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 215/468 (45%), Gaps = 2/468 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A    + M   G K DV+ AT L+   C   ++  A+ + +  +  GI+P    Y 
Sbjct: 277 RMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYG 336

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+    + G    A +L  +M   G   +T   + +++GL        ++   + +   
Sbjct: 337 VLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADS 396

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+ FTY+ L+    +   +  A+ L D +   G KP++ +YN LL G CK+G  +EA
Sbjct: 397 GL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEA 455

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++ + ++P +GF+PNVV+Y  L+R    +  ++ A  LL EM     S    TYN+LI  
Sbjct: 456 VKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLING 515

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           +    +      +L   +   F P+  +YN II      G +        QM  +   PN
Sbjct: 516 ICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPN 575

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +   C  G    A  ++  +  +        Y  +I   C++G    A QLL 
Sbjct: 576 IITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLV 635

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
            + K G  P++  Y+SLI G     +++E  + +  M +     D   +  L+ G  K  
Sbjct: 636 ILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDG 695

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
               +LE++  M+ KG +P+  T+T L  G+    +++ + ++L+E++
Sbjct: 696 NVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMR 743



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 212/469 (45%), Gaps = 6/469 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R     DA      M  +G++ D      L+    K    + A+++ + M  + I PD  
Sbjct: 169 RGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQR 228

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y   +  LCK G+ G A++++ +M++ G+ T   TY ++V  L   G + ++L+  D +
Sbjct: 229 VYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEM 288

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G   +    + L+      + V  A+ L  + +  G  P  V Y VL+ G  + G T
Sbjct: 289 RDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMT 348

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNI 313
           ++A    R +  +G  P+    +++L+ L  + RW++A  L  EM D G   P + TYN 
Sbjct: 349 QKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG--LPDVFTYNN 406

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI       K   AL + D M K   +PS  +YN ++   C +G +D  VK   +M    
Sbjct: 407 LIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG 466

Query: 374 CKPNEGTYNGLAMLCGVGK--VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            KPN  TY  L M   + K     A+A++  +     S     Y  +I  +C   +  + 
Sbjct: 467 FKPNVVTYITL-MRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEV 525

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             +L      GF P   TY+S+I G    G++  A  ++  M E    P++  + + + G
Sbjct: 526 DGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDG 585

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            C++  +D++L++   +  +G  P+   Y  L+ G   +  +  + ++L
Sbjct: 586 YCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL 634



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 3/380 (0%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           HKL +A    +RM   G KP +    +LL   CK   M +A+K+   M   G  P+  +Y
Sbjct: 415 HKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTY 474

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+     K +   A  L+++M+  G   N  TYN L+ G+CM+  + +    L   + 
Sbjct: 475 ITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMS 534

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G +P   TY+ ++    K   + +A  +   +  KG  PN+++Y   + G C+ G ++ 
Sbjct: 535 EGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDM 594

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++   D+  +G +P++V+YN L+   C EG    A +LL  +     +P  V YN LI 
Sbjct: 595 ALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLIT 654

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                       K  + M+KG      ++Y  +I     +G V   ++   +M  +   P
Sbjct: 655 GYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIP 714

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQL 434
           +  T+  L   LC  G +  A  +++ +  + +  P  F Y  +I    R  K  +AF+L
Sbjct: 715 DAFTFTALTHGLCRSGDIDGAKKLLEEM-RRLDVRPNVFIYNMLINGYLRDCKLQEAFRL 773

Query: 435 LYEMTKYGFTPDSYTYSSLI 454
             EM   G  PD  TY  L+
Sbjct: 774 HDEMLNMGIQPDDTTYDILV 793



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 130/267 (48%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+  +S+G  P ++   +++    KA  M  A  V + M   G+ P+  +YT  ++  C+
Sbjct: 529 LKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCR 588

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G    A++++  +   G   + V YN+L+ G C  GN++ +LQ L  L++ GL PN   
Sbjct: 589 TGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVV 648

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+        +    K  + +I  G   +  +Y  L+ G  K+G    A+  + ++ 
Sbjct: 649 YNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMM 708

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +KG+ P+  ++  L   LC  G  + A +LL EM   D  P +  YN+LI       K  
Sbjct: 709 AKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQ 768

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIAR 352
            A ++ DEM+    +P   +Y+ ++++
Sbjct: 769 EAFRLHDEMLNMGIQPDDTTYDILVSK 795



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 94/172 (54%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  ++ A   L  ++  G  P+ V   +L+      N MK+  K  E M+  GI+ D S
Sbjct: 623 QEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTS 682

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++   K GNV +A++L  +M   GY  +  T+ +L  GLC  G+++ + + L+ +
Sbjct: 683 TYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM 742

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
            +  + PN F Y+ L+    ++  +  A +L D+++  G +P+  +Y++L++
Sbjct: 743 RRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 232/511 (45%), Gaps = 28/511 (5%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +  DA    ++M  KG +P+      L+   C+A    +A+++++ M S G+ P+   Y 
Sbjct: 166 RFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYN 225

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN-LNQSLQFLDRLIQ 196
            L++  C++G    A +LVE+M + G   + VT+NS +  LC  G  L  S  F D  I 
Sbjct: 226 TLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQID 285

Query: 197 KGL---VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + L    PN  T++ +LE   KE  +  A  L++ +   G    L SYN+ L GL + G+
Sbjct: 286 EELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGK 345

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA    +++  KG EPN+ S+N ++  LC  G   +A  ++  M      P  VTY+ 
Sbjct: 346 LLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYST 405

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+      GK   A  +L EM++    P+  + N ++  L  EG++    K L +M  R 
Sbjct: 406 LLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERS 465

Query: 374 CKPNEGTYN-GLAMLCGVGKVQEAFAIIQ--------SLGNKQNSS-------------- 410
              +  T N  +  LC  GK+ EA  I++        +LGN  NS               
Sbjct: 466 YDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCL 525

Query: 411 PQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           P    Y  +I  LC+ G+  +A +   EM      PDS  Y + I   C  G I  A  +
Sbjct: 526 PDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRV 585

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              ME+      +  +N+L+LGL    +      +   M EKG  PN  TY  ++  +  
Sbjct: 586 LKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCE 645

Query: 530 QDELELSAEVLKELQLRQVVSESAVERLVMQ 560
              ++ +  +L E+  + +    +  RL+++
Sbjct: 646 GGRIKDATSLLDEMLQKGISPNISSFRLLIK 676



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 244/512 (47%), Gaps = 32/512 (6%)

Query: 30  PNLHSFS-LNKGFIRVLASTQVT--ISPKDSVYTKPNRKPGNNNDTRH-RDHKLNDAFLQ 85
           PN  SF  L +G+ R   S +    +    S   +PN+   N   +   R+ +  +A   
Sbjct: 184 PNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERL 243

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGI---IPDASSYTYLVN 141
           +ERM   G  PDVV   + +  LC A K+ +A ++  +M +   +    P+ +++  ++ 
Sbjct: 244 VERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLE 303

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK+G +  A  LVE M+  G      +YN  + GL   G L ++   L  ++ KG+ P
Sbjct: 304 GFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEP 363

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N ++++ +++   K   +  A  ++  +I+ G  P+ V+Y+ LL G C  G+  +A    
Sbjct: 364 NIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNIL 423

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++  +G  PN  + NILL SL  EGR  EA +LL +M+        VT NI+I  L   
Sbjct: 424 HEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKS 483

Query: 322 GKTDHALKVLDEM-VKG----------------------RFRPSAASYNPIIARLCSEGK 358
           GK D A+++++ M + G                      +  P   +Y+ II  LC  G+
Sbjct: 484 GKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGR 543

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
           +D   K   +M  +   P+   Y+  +   C  GK+  AF +++ +  +  +   + Y  
Sbjct: 544 LDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNS 603

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           +I  L  K + ++ + LL +M + G TP+  TY+++I  LC  G I++A  +   M +  
Sbjct: 604 LILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKG 663

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
             P++ +F  L+   CK+    +  EVF++ +
Sbjct: 664 ISPNISSFRLLIKAFCKASDFGVVKEVFEIAL 695



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 241/503 (47%), Gaps = 31/503 (6%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A   +E M   G+  ++      L  L +  K+ +A   ++ MV  GI P+  S+  
Sbjct: 311 LEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNT 370

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           +++ LCK G +  A  ++  M   G   +TVTY++L+ G C  G + ++   L  ++++G
Sbjct: 371 VMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRG 430

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             PN +T + LL + +KE  +  A KLL  +  +    + V+ N+++ GLCK G+ +EA+
Sbjct: 431 CSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAV 490

Query: 259 RFFR---------------------DLPSKGFE--PNVVSYNILLRSLCMEGRWEEANEL 295
                                    D  S G +  P++++Y+I++  LC  GR +EA + 
Sbjct: 491 EIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKK 550

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             EM G    P  + Y+  I S   HGK   A +VL +M K     S  +YN +I  L S
Sbjct: 551 FIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGS 610

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
           + ++  +   LD M  +   PN  TYN + + LC  G++++A +++  +  K  S     
Sbjct: 611 KNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISS 670

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           ++ +I + C K   +   + ++E+           YS +   L + G + EA E+F    
Sbjct: 671 FRLLIKAFC-KASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDA-- 727

Query: 475 EYDYKPDVDNF--NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
             D   D+ NF  N L+  LCK    + + ++   MI+KG   +  ++  +++G+  + +
Sbjct: 728 ALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGK 787

Query: 533 LELSAEVLKELQLRQVVSESAVE 555
            +  A+ L E ++  + SE  VE
Sbjct: 788 -KHDADELAE-RMMDMASEGMVE 808



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 229/496 (46%), Gaps = 32/496 (6%)

Query: 82  AFLQLERMVSK--GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           AF Q +   S+   + P V     +L    + +K+     + + MV +G+ P+  +   L
Sbjct: 98  AFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLL 157

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LC  G    A ++ +KM   G   N  ++  LVRG C  G   ++L+ LD +   G+
Sbjct: 158 IAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGV 217

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            PN   Y+ L+ +  +E     A +L++ +   G  P++V++N  ++ LC  G+  EA R
Sbjct: 218 QPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASR 277

Query: 260 FFRDLPSK---GF-EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
            FRD+      G   PN+ ++N++L   C EG  EEA  L+  M        + +YNI +
Sbjct: 278 IFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWL 337

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L  +GK   A   L EMV     P+  S+N ++  LC  G +      +  M      
Sbjct: 338 LGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIG 397

Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY-KYVITSLCRKGKTYQAFQ 433
           P+  TY+ L    C  GKV +A  I+  +  ++  SP  +    ++ SL ++G+ ++A +
Sbjct: 398 PDTVTYSTLLHGCCSTGKVLKANNILHEM-MRRGCSPNTYTCNILLHSLWKEGRIFEAEK 456

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK-------------- 479
           LL +M +  +  D+ T + +I GLC  G ++EA+EI   M  +                 
Sbjct: 457 LLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVD 516

Query: 480 ---------PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
                    PD+  ++ ++ GLCK+ R D + + F  M+ K   P+   Y   +      
Sbjct: 517 SSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKH 576

Query: 531 DELELSAEVLKELQLR 546
            ++  +  VLK+++ R
Sbjct: 577 GKISSAFRVLKDMEKR 592



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 27/322 (8%)

Query: 79  LNDAFLQLERMVSKGHK--PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           L ++F+ L    S G K  PD++  + ++  LCKA ++ +A K    MV   + PD+  Y
Sbjct: 507 LGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIY 566

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ---FLDR 193
              ++  CK G +  A ++++ ME  G   +  TYNSL+ GL   G+ NQ  +    LD 
Sbjct: 567 DTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGL---GSKNQIFEIYGLLDD 623

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE-- 251
           + +KG+ PN  TY+ ++    +   +  A  LLD+++ KG  PN+ S+ +L+   CK   
Sbjct: 624 MKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASD 683

Query: 252 -GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI-- 308
            G  +E   F   L   G +  +  Y+++   L + G   EA EL       DR   +  
Sbjct: 684 FGVVKEV--FEIALSICGHKEAL--YSLMFNELLIGGEVSEAKELFDA--ALDRCFDLGN 737

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV----DLVVK 364
             YN LI  L      ++A  +L +M+   +R   AS+ P+I  L   GK     +L  +
Sbjct: 738 FQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAER 797

Query: 365 CLDQ----MFHRRCKPNEGTYN 382
            +D     M   +   NE  +N
Sbjct: 798 MMDMASEGMVENKITRNESAFN 819



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 34/256 (13%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L++A  +   MV K   PD +     ++  CK  K+  A +V++ M   G      +Y 
Sbjct: 543 RLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYN 602

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  L  K  +     L++ M++ G   N  TYN+++  LC  G +  +   LD ++QK
Sbjct: 603 SLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQK 662

Query: 198 GLVPNAFTYSFLLEA---------------------AYKER-------------GVHAAM 223
           G+ PN  ++  L++A                      +KE               V  A 
Sbjct: 663 GISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAK 722

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           +L D  + +        YN L+  LCK+   E A      +  KG+  +  S+  ++  L
Sbjct: 723 ELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGL 782

Query: 284 CMEGRWEEANELLAEM 299
              G+  +A+EL   M
Sbjct: 783 GKRGKKHDADELAERM 798


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 223/463 (48%), Gaps = 2/463 (0%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F +++R       P +     L+    +A +    + V   ++ +G+ PD  SY  L++ 
Sbjct: 103 FKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDG 162

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K+G V  A  L  KME+ G   N VTY+SL+ GLC    ++++ + L +++  G+ PN
Sbjct: 163 FSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPN 222

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L+           ++++  ++ +    P++ + N  +T LCK GR +EA   F 
Sbjct: 223 NMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFD 282

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  KG +P+V+SY  LL      G     + L   M      P    +N LI + A  G
Sbjct: 283 SMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLG 342

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             D +L + ++M K    P   +++ +I+  C  G++D  ++  + M      P+   Y+
Sbjct: 343 MMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYS 402

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSP-QEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
            L    C    + +A  +I  + +K    P  +F+  +I +LC++G+  +   ++  +  
Sbjct: 403 CLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH 462

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  P+  T++SL+ G C+ G ++EA+ +   ME    +PD+  +N L+ G CK  R D 
Sbjct: 463 TGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 522

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +L +F+ M+ K       +Y I++ G+       ++ E+  E+
Sbjct: 523 ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 565



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 219/483 (45%), Gaps = 35/483 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A    + MV KG KPDV+    LL+    A  +     +  +MV  G++PD   + 
Sbjct: 273 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 332

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N   + G +  ++ + E M   G   + +T+++++   C LG L+ +++  + +I  
Sbjct: 333 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 392

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY-NVLLTGLCKEGRTEE 256
           G+ P+   YS L++     R +  A +L+ D+++KG  P  + +   ++  LCKEGR  E
Sbjct: 393 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAE 452

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
                  +   G  PN++++N L+   C+ G  +EA  LL  M+     P I TYN L+ 
Sbjct: 453 GKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVD 512

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
               HG+ D AL +  +M+  R   ++ SYN I+  L  + +  +V K   +MFH     
Sbjct: 513 GYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL-FQARRTIVAK---EMFH----- 563

Query: 377 NEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
            E   +G+A+                            Y  V+  LCR   T +A  LL 
Sbjct: 564 -EMIESGMAV------------------------SIHTYATVLGGLCRNNCTDEANMLLE 598

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           ++       D  T++ +IR +   G  +EA E+F  +  Y   P +  +  ++  L K  
Sbjct: 599 KLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 658

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
             + +  +F  M +    P+      ++  + ++ E+  +   L ++  + ++ E+    
Sbjct: 659 SFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTS 718

Query: 557 LVM 559
           L++
Sbjct: 719 LLI 721



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 210/458 (45%), Gaps = 2/458 (0%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           R++  G  PDV     L+    K  ++ KA  +   M   GI+P+  +Y+ L+N LCK  
Sbjct: 143 RLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTK 202

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            +  A +++ +M   G   N +TYN L+ G    G   +S++    +    LVP+    +
Sbjct: 203 EMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCN 262

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
             + A  K   +  A  + D ++ KG KP+++SY  LL G    G        F  +  +
Sbjct: 263 SFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCE 322

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G  P+   +N L+ +    G  +++  +  +M     +P I+T++ +I +    G+ D A
Sbjct: 323 GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDA 382

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY--NGLA 385
           ++  + M+     P  A Y+ +I   C+   +    + +  M  +   P    +  + + 
Sbjct: 383 MEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIIN 442

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G+V E   ++  + +         +  ++   C  G   +A  LL  M   G  P
Sbjct: 443 NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEP 502

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D YTY++L+ G C  G I++AL +F  M          ++N +L GL ++RRT ++ E+F
Sbjct: 503 DIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMF 562

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             MIE G   +  TY  ++ G+   +  + +  +L++L
Sbjct: 563 HEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 600



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/471 (21%), Positives = 225/471 (47%), Gaps = 2/471 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L +MV  G +P+ +    L++    +   K++++V + M SS ++PD  +    +  LCK
Sbjct: 211 LRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 270

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A  + + M   G   + ++Y +L+ G    G +       + ++ +G+VP+   
Sbjct: 271 HGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHV 330

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ L+ A  +   +  ++ + +D+  +G  P++++++ +++  C+ GR ++A+  F  + 
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 390

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKT 324
             G  P+   Y+ L++  C      +A EL+++M   G   P I  +  +I +L   G+ 
Sbjct: 391 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 450

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
                V+D ++    RP+  ++N ++   C  G +   V  LD M     +P+  TYN L
Sbjct: 451 AEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTL 510

Query: 385 A-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
               C  G++ +A  + + + +K+ +     Y  ++  L +  +T  A ++ +EM + G 
Sbjct: 511 VDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGM 570

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
               +TY++++ GLC     +EA  +   +   + K D+  FN ++  + K  R   + E
Sbjct: 571 AVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKE 630

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           +F  +   G +P   TY +++  +  ++  E +  +   ++      +S +
Sbjct: 631 LFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 681



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 171/368 (46%), Gaps = 4/368 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS-Y 136
           +L+DA  +   M+  G  PD    + L+   C    + KA +++  M+S GI P     +
Sbjct: 378 RLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFF 437

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T ++N LCK+G V     +V+ +   G   N +T+NSLV G C++GN+ +++  LD +  
Sbjct: 438 TSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES 497

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+ P+ +TY+ L++   K   +  A+ L  D++ K      VSYN++L GL +  RT  
Sbjct: 498 VGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIV 557

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A   F ++   G   ++ +Y  +L  LC     +EAN LL ++   +    I+T+NI+I 
Sbjct: 558 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIR 617

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           ++   G+   A ++   +      P+  +Y  +I  L  E   +        M    C P
Sbjct: 618 AMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTP 677

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +    N +  ML   G+V +A   +  +  K           +I      GK  +  +LL
Sbjct: 678 DSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLL 737

Query: 436 YEMTKYGF 443
            E  KY F
Sbjct: 738 PE--KYRF 743



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 38/300 (12%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++ ++  G +P+++   +L+   C    MK+A+ +++ M S G+ PD  +Y  LV+  CK
Sbjct: 457 VDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCK 516

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGL--------------------------- 178
            G +  A+ L   M        +V+YN ++ GL                           
Sbjct: 517 HGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHT 576

Query: 179 --CMLGNL------NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
              +LG L      +++   L++L    +  +  T++ ++ A +K      A +L   I 
Sbjct: 577 YATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIS 636

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
             G  P +++Y V++T L KE   E+A   F  +      P+    N ++R L  +G   
Sbjct: 637 TYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVA 696

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF-RPSAASYNPI 349
           +A   L+++D     P   T ++LI   + +GK    +K+L E  K RF R  AA  N I
Sbjct: 697 KAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE--KYRFLREQAAVDNCI 754



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 116/275 (42%), Gaps = 4/275 (1%)

Query: 28  QIPNLHSF-SLNKGFIRV--LASTQVTISPKDSVYTKPNRKPGNN-NDTRHRDHKLNDAF 83
           Q PNL +F SL  G+  V  +      +   +SV  +P+    N   D   +  +++DA 
Sbjct: 465 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 524

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
                M+ K      V    +L+ L +A +   A ++   M+ SG+     +Y  ++  L
Sbjct: 525 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 584

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           C+      A  L+EK+       + +T+N ++R +  +G   ++ +    +   GLVP  
Sbjct: 585 CRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTI 644

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY  ++    KE     A  L   +      P+    N ++  L  +G   +A  +   
Sbjct: 645 LTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSK 704

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           +  KG  P   + ++L+    + G++ E  +LL E
Sbjct: 705 IDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 226/505 (44%), Gaps = 36/505 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            ++M++    P+V     L+  LC   K+KKA+ ++ MM  +G +P   SY  L++  CK
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG   +A+ L+  ME  G   +  TYN  +  LC      Q    L ++  K + PN  +
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+    KE  +  A ++ +++I     PNL++YN+L+ G C  G  EEA+R    + 
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVME 342

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +    PN V+   LL  L    +++ A  +L        S   +++ ++I  L  +G  D
Sbjct: 343 ANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLD 402

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++L EM K    P   +++ +I   C  G ++   + + +++     PN   ++ L 
Sbjct: 403 EAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLI 462

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C VG V E      ++     ++       ++ SLC  GK  +A + L+ +++ G  
Sbjct: 463 YNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLV 522

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK---------- 494
           P+S T+  +I G    G    A  +F  M    + P    + +LL  LCK          
Sbjct: 523 PNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKL 582

Query: 495 -----------------------SRRTDL--SLEVFQMMIEKGQMPNETTYTILVEGIAH 529
                                  S+  +L  ++ +F+ MI+   +P+  TYT ++ G+  
Sbjct: 583 LKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIR 642

Query: 530 QDELELSAEVLKELQLRQVVSESAV 554
           +  L  +   L  L  +++++ +++
Sbjct: 643 EGRLVCAFIFLGRLMQKEILTLNSI 667



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 209/471 (44%), Gaps = 1/471 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   +  A      M+ +G KP V     ++  + K  +        + M++S + P+ S
Sbjct: 117 RQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVS 176

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+  L++ LC +G +  A+ ++  ME  GY    V+YN+L+   C  G    +L  +  +
Sbjct: 177 SFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHM 236

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG+  +  TY+  +++  +         +L  +  K   PN VSYN L+ G  KEG+ 
Sbjct: 237 ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKI 296

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A R F ++      PN+++YNIL+   C+ G +EEA  LL  M+  D  P  VT   L
Sbjct: 297 GVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTL 356

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L    K D A  +L+     R   +  S+  +I  LC  G +D   + L +M     
Sbjct: 357 LNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGV 416

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  T++ L    C VG + +A  ++  +  +        +  +I + C+ G  Y+  +
Sbjct: 417 YPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMK 476

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
               M   G   D++T +SL+  LC  G + EA E    +      P+   F+ ++ G  
Sbjct: 477 FYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYA 536

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
                  +  VF  MI  G  P+  TY  L++ +        + ++LK+L 
Sbjct: 537 NVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLH 587



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 213/468 (45%), Gaps = 8/468 (1%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A + +  M  KG + DV      +  LC+ ++  +   V++ M +  I P+  SY  L+N
Sbjct: 229 ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLIN 288

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
              K+G +G A ++  +M +     N +TYN L+ G C+ GN  ++L+ LD +    + P
Sbjct: 289 GFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRP 348

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N  T   LL   YK      A  +L+         N +S+ V++ GLC+ G  +EA +  
Sbjct: 349 NEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLL 408

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++   G  P+++++++L+   C  G   +A E+++++      P  V ++ LI +    
Sbjct: 409 IEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKV 468

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G     +K    M          + N ++A LC  GK+    + L  +      PN  T+
Sbjct: 469 GNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTF 528

Query: 382 ----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
               NG A    VG    AF++   + +  +      Y  ++  LC+    ++A +LL +
Sbjct: 529 DCIINGYA---NVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +       D+ +Y++LI  +   G + EA+ +F  M + +  PD   +  +L GL +  R
Sbjct: 586 LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 498 TDLSLEVFQMMIEKGQMP-NETTYTILVEGIAHQDELELSAEVLKELQ 544
              +      +++K  +  N   YT  ++G+    + + +  + KE++
Sbjct: 646 LVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEME 693



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 189/423 (44%), Gaps = 1/423 (0%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           + + +  L+    ++G VG+A+     M   G+  +  T N ++  +      +    F 
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFF 163

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
            +++   + PN  +++ L+     +  +  A+ +L  +   G  P +VSYN LL+  CK+
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           GR + A+     +  KG + +V +YN+ + SLC   R  +   +L +M     +P  V+Y
Sbjct: 224 GRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSY 283

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N LI      GK   A +V +EM++    P+  +YN +I   C  G  +  ++ LD M  
Sbjct: 284 NTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEA 343

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              +PNE T   L   L    K   A  I++     + S     +  +I  LCR G   +
Sbjct: 344 NDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDE 403

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AFQLL EM K G  PD  T+S LI G C  G + +A E+   +    + P+   F+ L+ 
Sbjct: 404 AFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIY 463

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
             CK       ++ +  M   GQ  +  T   LV  +    +L  + E L  +    +V 
Sbjct: 464 NSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVP 523

Query: 551 ESA 553
            S 
Sbjct: 524 NSV 526



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 220/506 (43%), Gaps = 72/506 (14%)

Query: 117  AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
            A  V + M+S G  P   +Y  L+  LCK  N   A +L++K+       +T++YN+L+ 
Sbjct: 544  AFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIV 603

Query: 177  GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
             +   GNL ++++  + +IQ  ++P+++TY+ +L    +E  +  A   L  ++ K    
Sbjct: 604  EISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILT 663

Query: 237  -NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
             N + Y   + GL K G+++ A+  F+++  KG   ++++ N +       G+   A+ L
Sbjct: 664  LNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSL 723

Query: 296  LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
            +++    +  P + T+NIL+   +         K+ + M +  F P+  +Y+ +I  LC+
Sbjct: 724  ISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCN 783

Query: 356  EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC----GVGKV------------------ 393
             G ++L +K L          ++ T+N L   C     + KV                  
Sbjct: 784  HGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDT 843

Query: 394  --------------QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
                          Q  F  +  +  K      + Y  ++  +CR G    AF+L  +M 
Sbjct: 844  QKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMV 903

Query: 440  KYGFTPDSYTYSSLIRGLCMEGLIEEALEIF----------------------------- 470
              G + D     +++RGL + G IEEA+ I                              
Sbjct: 904  ALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFK 963

Query: 471  ------VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
                  ++ME Y  K D+  +N L+   C +     +L+ ++ + +KG +PN TTY +LV
Sbjct: 964  EAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLV 1023

Query: 525  EGIAHQDELELSAEVLKELQLRQVVS 550
              I+ +  +     VLK+L  R +VS
Sbjct: 1024 SAISTKHYVSRGEIVLKDLNDRGLVS 1049



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 108/505 (21%), Positives = 230/505 (45%), Gaps = 19/505 (3%)

Query: 74  HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           ++  K + A   LER        + +  T ++  LC+   + +A +++  M   G+ PD 
Sbjct: 361 YKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDI 420

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +++ L+N  CK GN+  A +++ K+   G+  N V +++L+   C +GN+ + ++F   
Sbjct: 421 ITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAA 480

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +   G   + FT + L+ +  +   +  A + L  I   G  PN V+++ ++ G    G 
Sbjct: 481 MNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGD 540

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              A   F  + S G  P+  +Y  LL+ LC    + EA +LL ++     +   ++YN 
Sbjct: 541 GSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNT 600

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI  ++  G    A+++ +EM++    P + +Y  I++ L  EG++      L ++  + 
Sbjct: 601 LIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKE 660

Query: 374 CKPNEGTYNGLAMLCGV------GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
                 T N +   C +      G+ + A  + + +  K  S        +     R GK
Sbjct: 661 IL----TLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGK 716

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
            + A  L+ +       P+  T++ L+ G      I    +++ +M    + P+   +++
Sbjct: 717 VFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHS 776

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+LGLC     +L +++ +M I +    ++ T+ +L+      ++L+   ++   +++ +
Sbjct: 777 LILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFR 836

Query: 548 V---------VSESAVERLVMQYDF 563
           V         V++  V R+V Q  F
Sbjct: 837 VSLDKDTQKAVTDVLVRRMVSQNYF 861



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/543 (23%), Positives = 217/543 (39%), Gaps = 72/543 (13%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  R+ +    +L L++M +K   P+ V    L+    K  K+  A +V   M+   + 
Sbjct: 253 DSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLS 312

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL---------------- 174
           P+  +Y  L+N  C  GN   A++L++ ME      N VT  +L                
Sbjct: 313 PNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372

Query: 175 -------------------VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
                              + GLC  G L+++ Q L  + + G+ P+  T+S L+    K
Sbjct: 373 LERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCK 432

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              ++ A +++  I  +G  PN V ++ L+   CK G   E ++F+  +   G   +  +
Sbjct: 433 VGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFT 492

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
            N L+ SLC  G+  EA E L  +      P  VT++ +I   A  G    A  V D+M+
Sbjct: 493 CNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMI 552

Query: 336 KGRFRPS-----------------------------------AASYNPIIARLCSEGKVD 360
                PS                                     SYN +I  +   G + 
Sbjct: 553 SCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLL 612

Query: 361 LVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYV 418
             V+  ++M      P+  TY   L+ L   G++  AF  +  L  K+  +     Y   
Sbjct: 613 EAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCF 672

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
           I  L + G++  A  L  EM + G + D    +S+  G    G +  A  +       + 
Sbjct: 673 IDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNV 732

Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
            P++  FN LL G  + +      +++ +M   G  PN  TY  L+ G+ +   LEL  +
Sbjct: 733 IPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIK 792

Query: 539 VLK 541
           +LK
Sbjct: 793 MLK 795



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/324 (18%), Positives = 133/324 (41%), Gaps = 35/324 (10%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   R  K+  A   + +  +K   P++     LL+   +   +    K+  +M  SG  
Sbjct: 709  DGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFF 768

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ- 189
            P+  +Y  L+  LC  G +   +++++         + +T+N L+R  C + +L++ +  
Sbjct: 769  PNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDL 828

Query: 190  ----------------------------------FLDRLIQKGLVPNAFTYSFLLEAAYK 215
                                              F+  +++KG +P +  Y  +++   +
Sbjct: 829  THNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCR 888

Query: 216  ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
               +  A KL D ++A G   +  +   ++ GL   G+ EEA+   + +      P   +
Sbjct: 889  VGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTST 948

Query: 276  YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
            +  L+   C +  ++EA+ L   M+       IV YN+LI +   +G    AL   +E+ 
Sbjct: 949  FTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIK 1008

Query: 336  KGRFRPSAASYNPIIARLCSEGKV 359
            +    P+  +Y  +++ + ++  V
Sbjct: 1009 QKGLLPNMTTYRVLVSAISTKHYV 1032



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            R   +  AF   ++MV+ G   D      ++  L    K+++A+ +++ M+    IP  S
Sbjct: 888  RVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTS 947

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++T L++  CKK N   A  L   ME Y    + V YN L+   C  G++  +L F + +
Sbjct: 948  TFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEI 1007

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
             QKGL+PN  TY  L+ A   +  V     +L D+  +G
Sbjct: 1008 KQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRG 1046



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 36/193 (18%)

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT------------------- 449
           SS    +  +I    R+G    A      M   GF P  YT                   
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161

Query: 450 ----------------YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
                           ++ LI  LC++G +++A+ I  +ME   Y P + ++N LL   C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV-SES 552
           K  R   +L +   M  KG   +  TY + ++ +           VLK+++ + +  +E 
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 553 AVERLVMQYDFEG 565
           +   L+  +  EG
Sbjct: 282 SYNTLINGFVKEG 294



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K+ +A   L+RM+     P     T L++  CK +  K+A  +  +M    +  D  +Y 
Sbjct: 926  KIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYN 985

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L++  C  G+V  A+   E+++  G   N  TY  LV  +     +++    L  L  +
Sbjct: 986  VLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDR 1045

Query: 198  GLV 200
            GLV
Sbjct: 1046 GLV 1048


>gi|297724097|ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
 gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa Japonica Group]
          Length = 553

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 205/400 (51%), Gaps = 7/400 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC-LCKKGNVGYAM 153
           +PD    T +   L  A++   A+ V++ M + G+ PDA++ T LV    C+      A 
Sbjct: 99  RPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAY 158

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           ++V  M   G   + VTY++L+ GLC  G + ++L  LD ++++G  PNA TY+ ++ A 
Sbjct: 159 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAY 218

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
                +H A +LL+ +IA G  P+  +YNVL+  LCK G  EE      +  +KG+ P+V
Sbjct: 219 CTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDV 278

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           ++Y+  +  LC  GR +++  L+ +M      P+ VT NIL+  +        A ++L+ 
Sbjct: 279 ITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLEC 338

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
             +  +  +  +YN ++ +LC E +   VVK    M  +   PN  T+N +   LC +G+
Sbjct: 339 SAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGR 398

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           + +A  +++S   K+  +    Y  +I  L   G+  +   LLY+M + G  P+  TYS 
Sbjct: 399 LHKALFLLRS---KEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSL 455

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +I  LC E     AL  F    E D+ P    F +++ GL
Sbjct: 456 VIDCLCREEKFLVALCCFYQSLEDDFFPSA--FLSIIRGL 493



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 188/389 (48%), Gaps = 8/389 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + + A+  +  MV+ G  PDVV  + L+  LC A ++ +A+ V+++M+  G  P+A 
Sbjct: 150 RLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAH 209

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT +V+  C  G +  A +L+  M   G+  +T TYN LV  LC +G   +    L+  
Sbjct: 210 TYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEES 269

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG  P+  TYS  ++   K   +  +  L+D +++ G +P+ V+ N+LL G+C+    
Sbjct: 270 TAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTA 329

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A R        G++ NVV+YN ++R LC E RW    +L  +M     +P   T+NI+
Sbjct: 330 WAAKRLLECSAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIV 389

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + SL   G+   AL +L       F  +  +YN +I  L   G+ + V   L QM     
Sbjct: 390 VHSLCKLGRLHKALFLLR---SKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGI 446

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAII-QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
            PN+ TY+  +  LC   K   A     QSL  + +  P  F   +I  L   G   Q  
Sbjct: 447 APNDITYSLVIDCLCREEKFLVALCCFYQSL--EDDFFPSAFLS-IIRGLIVGGMLGQLH 503

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
            L+  +   GF  + Y Y  LI+ LC  G
Sbjct: 504 TLIGCVLGQGFIIEVYIYQELIKALCKNG 532



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 173/351 (49%), Gaps = 9/351 (2%)

Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEA-AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           +L  LD +   G+ P+A   + L+   A + R   AA +++  ++A G  P++V+Y+ L+
Sbjct: 121 ALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLI 180

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
           +GLC  G+  EA+     +  +G +PN  +Y  ++ + C  GR  EA  LL  M     +
Sbjct: 181 SGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFA 240

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P+  TYN+L+ +L   G  +    +L+E     + P   +Y+  +  LC  G++D     
Sbjct: 241 PSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFAL 300

Query: 366 LDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFA---IIQSLGNKQNSSPQEFYKYVITSL 422
           +D+M     +P+E T N   +L GV +   A+A   +++        +    Y  V+  L
Sbjct: 301 VDKMLSNGLQPSEVTLN--ILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRKL 358

Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
           C + +     +L  +M K G  P+S+T++ ++  LC  G + +AL    ++   ++   V
Sbjct: 359 CDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKAL---FLLRSKEFVATV 415

Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
             +N L+  L  S   +    +   MIE G  PN+ TY+++++ +  +++ 
Sbjct: 416 ITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEKF 466



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 159/352 (45%), Gaps = 6/352 (1%)

Query: 204 FTYSFLLEAAYKER---GVHAAMKLLDDIIAK-GGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           + Y+ L+ A    R   G   A+ LLD++ A    +P+   +  +   L    R   A+ 
Sbjct: 64  YDYNRLMSAHAGTRDGAGADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPGAALA 123

Query: 260 FFRDLPSKGFEPNVVSYNILLRS-LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
               + + G  P+  +  +L+    C   R++ A E++  M     +P +VTY+ LI  L
Sbjct: 124 VLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGL 183

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              G+   AL VLD M++   +P+A +Y PI+   C+ G++    + L+ M      P+ 
Sbjct: 184 CSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPST 243

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L   LC VG  +E  A+++    K  +     Y   +  LC+ G+  ++F L+ +
Sbjct: 244 ATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDK 303

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  P   T + L+ G+C       A  +     E  +  +V N+N ++  LC   R
Sbjct: 304 MLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRKLCDEHR 363

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
               +++F  M +KG  PN  T+ I+V  +     L  +  +L+  +    V
Sbjct: 364 WLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKALFLLRSKEFVATV 415


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 229/480 (47%), Gaps = 35/480 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L++AF     M+ KG  PD+V  + L+  L +A K+++   +  M ++ G+  D  
Sbjct: 287 KELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVV 346

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++ +++   + G++G A+++  +M   G   N VTY+ L+ GLC  G + ++     ++
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++GL P+  TYS L++   K   +     L   ++ KG  P++V  ++L+ GL ++G  
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMM 466

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+RFF     +G   N   +N L+       R  +  ++   M      P +VTY +L
Sbjct: 467 DEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVL 526

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  LA  G+ D AL +  +++K  F P    Y  +I   C                 ++ 
Sbjct: 527 VKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC-----------------KKR 569

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            P  G               + F ++QS G   +      Y  +I    R+G      +L
Sbjct: 570 DPATGL--------------QIFKLMQSNGIFPDIC---IYNVLINMFFREGCVENVLEL 612

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L E+ KYG  PD  TY+++I G C   +  +A+++F V++    +P+   F  L+   CK
Sbjct: 613 LREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCK 672

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             R D ++ +F  M+E+G  PN  TY+ L++G    +  E SA  L E  L   VS + V
Sbjct: 673 DGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTE-SAFELYEKMLGDRVSPNIV 731



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 188/412 (45%), Gaps = 7/412 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y ++ N   K+G V   +     + + G     V  N +++GLCM   +  +  F D ++
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PN  T+S L+    KE  +  A  L + +I KG  P+LV Y++L+ GL + G+ E
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           E    F    ++G + +VV ++ ++ +    G   +A E+   M     SP +VTY+ILI
Sbjct: 328 EGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILI 387

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L  +G+   A  V  +++K    PS  +Y+ +I   C    +         M  +   
Sbjct: 388 NGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV 447

Query: 376 PN----EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           P+        NGL+     G + EA         +  +     +  +I    R  +T   
Sbjct: 448 PDVVVCSMLINGLSR---QGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG 504

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++   M  Y   PD  TY+ L++GL  +G ++EAL +F  + +  + PD   +  L+ G
Sbjct: 505 LKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDG 564

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            CK R     L++F++M   G  P+   Y +L+     +  +E   E+L+E+
Sbjct: 565 FCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREI 616



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/473 (22%), Positives = 213/473 (45%), Gaps = 7/473 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P  V +  LL+  C+   + +A+     M   G+     + + +++ L     +   
Sbjct: 136 GSNPSTVYSF-LLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           ++  E+M   G       +NS ++     G + + L F   L+++GLVP     + +L+ 
Sbjct: 195 LENYEEMCK-GLGVYEFVFNSFLKR----GEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
                 +  A    D ++  G  PNLV+++ L+   CKE R +EA   +  +  KG  P+
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           +V Y+IL+  L   G+ EE N L +          +V ++ ++ +    G    A++V  
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
            M+K    P+  +Y+ +I  LC  G+V        Q+  +  +P+  TY+ L    C   
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            +++ F +   +  K +         +I  L R+G   +A +  ++  K G T ++Y ++
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFN 489

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LI G        + L+++++M  Y   PDV  +  L+ GL +  R D +L +F  +++K
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           G  P+   Y  L++G   + +     ++ K +Q   +  +  +  +++   F 
Sbjct: 550 GFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 135/264 (51%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L++A     +++ KG  PD +    L+   CK       +++ ++M S+GI PD   Y 
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYN 594

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N   ++G V   ++L+ ++  YG   + VTYN+++ G C L   +++++  + L   
Sbjct: 595 VLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCG 654

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PNA T++ L++A  K+  +  AM +   ++ +G +PN+++Y+ L+ G  K   TE A
Sbjct: 655 RTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESA 714

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              +  +      PN+VSY+IL+  LC +G  EEA+       G    P ++ Y ILI  
Sbjct: 715 FELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRG 774

Query: 318 LAYHGKTDHALKVLDEMVKGRFRP 341
               G+   A+ + D M+     P
Sbjct: 775 YCKVGRLAEAMMLYDHMLVNGIMP 798



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 173/386 (44%), Gaps = 5/386 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +   L D F     M+ KGH PDVV  + L+  L +   M +A++     V  G+ 
Sbjct: 423 DGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLT 482

Query: 131 PDASSYTYLVN-CL-CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
            +   +  L++ C   K+   G  M ++  M  Y    + VTY  LV+GL   G L+++L
Sbjct: 483 LNNYLFNALIDGCFRLKRTRDGLKMYILMGM--YKVIPDVVTYTVLVKGLAEQGRLDEAL 540

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
               +L++KG  P+   Y  L++   K+R     +++   + + G  P++  YNVL+   
Sbjct: 541 ALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMF 600

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
            +EG  E  +   R++   G EP++V+YN ++   C    + +A +L   +  G   P  
Sbjct: 601 FREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNA 660

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           +T+ ILI +    G+ D A+ +   M++    P+  +Y+ +I         +   +  ++
Sbjct: 661 ITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEK 720

Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
           M   R  PN  +Y+ L   LC  G ++EA    Q    +        Y  +I   C+ G+
Sbjct: 721 MLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGR 780

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSL 453
             +A  L   M   G  PD     +L
Sbjct: 781 LAEAMMLYDHMLVNGIMPDDLLQKAL 806



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 135/290 (46%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDVV  T L+  L +  ++ +A+ +   ++  G  PD   Y  L++  CKK +    +Q+
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            + M+  G   +   YN L+      G +   L+ L  +I+ GL P+  TY+ ++     
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
            +    A+KL + +     +PN +++ +L+   CK+GR ++A+  F  +  +G EPN+++
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y+ L+         E A EL  +M G   SP IV+Y+ILI  L   G  + A       +
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAI 757

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
                P   +Y  +I   C  G++   +   D M      P++     LA
Sbjct: 758 GRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALA 807



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 73/146 (50%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D +++DA L    M+ +G +P+++  + L+    K    + A ++ E M+   + 
Sbjct: 668 DAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVS 727

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SY+ L++ LCKKG +  A    +         + + Y  L+RG C +G L +++  
Sbjct: 728 PNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMML 787

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKE 216
            D ++  G++P+      L E  +++
Sbjct: 788 YDHMLVNGIMPDDLLQKALAEYGFQD 813


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 223/473 (47%), Gaps = 5/473 (1%)

Query: 78  KLNDAFLQLE---RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           KL+D    LE   RM      P V     L+  LCK  +M  A ++ + M++  ++P   
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLI 250

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++  CK GN   + ++ E+M+      + +T+N+L++GL   G +  +   L  +
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G VP+AFT+S L +         AA+ + +  +  G K N  + ++LL  LCKEG+ 
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E+A        +KG  PN V YN ++   C +G    A   +  M+     P  + YN L
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G+ ++A K +++M      PS  +YN +I     + + D     L +M     
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  +Y  L   LC   K+ EA  + + + ++  S     Y  +I   C KGK   AF+
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
              EM K G   +  TY++LI GL M G + EA ++ + +     KPDV  +N+L+ G  
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            +      + +++ M   G  P   TY +L+  +  ++ +EL+  +  E+ L+
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLK 662



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 220/470 (46%), Gaps = 5/470 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++NDA    + M+++   P ++    L+   CKA   +K+ KV E M +  I P   
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLI 285

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L+  L K G V  A  ++++M+D G+  +  T++ L  G         +L   +  
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G+  NA+T S LL A  KE  +  A ++L   +AKG  PN V YN ++ G C++G  
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A      +  +G +P+ ++YN L+R  C  G  E A + + +M     SP++ TYNIL
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           IG      + D    +L EM      P+  SY  +I  LC   K+         M  R  
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P    YN L    C  GK+++AF   + +  K        Y  +I  L   GK  +A  
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL E+++ G  PD +TY+SLI G    G ++  + ++  M+    KP +  ++ LL+ LC
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLC 644

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
                +L+  +F  M  K   P+   Y  ++   A   ++E +  + K++
Sbjct: 645 TKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 228/494 (46%), Gaps = 11/494 (2%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D    + K   A    E  V  G K +    + LL  LCK  K++KA +++   ++ G++
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+   Y  +++  C+KG++  A   +E ME  G   + + YN L+R  C LG +  + + 
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++++  KG+ P+  TY+ L+    ++        +L ++   G  PN+VSY  L+  LCK
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             +  EA    RD+  +G  P V  YN+L+   C +G+ E+A     EM        +VT
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN LI  L+  GK   A  +L E+ +   +P   +YN +I+     G V   +   ++M 
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626

Query: 371 HRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTY 429
               KP   TY+ L  LC     +E   + + L  + +  P    Y  V+      G   
Sbjct: 627 RSGIKPTLKTYHLLISLC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
           +AF L  +M +     D  TY+SLI G    G + E   +   M   + +P+ D +N ++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV- 548
            G C+ +    +   ++ M EKG + +      LV G+  +   + +  V+ E+  R + 
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLG 802

Query: 549 ---VSE--SAVERL 557
              V E  SA E+L
Sbjct: 803 DVTVDEDLSATEKL 816



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 215/477 (45%), Gaps = 37/477 (7%)

Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
           + GI P + S T L++ L K       + +   + +  +  +   Y   ++    L ++ 
Sbjct: 137 NEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196

Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
           + L+  +R+    + P+ F Y+ L++   K + ++ A +L D+++A+   P+L++YN L+
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256

Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
            G CK G  E++ +    + +   EP+++++N LL+ L   G  E+A  +L EM      
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P   T++IL    + + K + AL V +  V    + +A + + ++  LC EGK++   + 
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 366 LDQMFHRRCKPNEGTYNGL------------------AM------------------LCG 389
           L +   +   PNE  YN +                  AM                   C 
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
           +G+++ A   +  +  K  S   E Y  +I    RK +  + F +L EM   G  P+  +
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y +LI  LC    + EA  +   ME+    P V  +N L+ G C   + + +    + M+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES-AVERLVMQYDFEG 565
           +KG   N  TY  L++G++   +L  + ++L E+  + +  +      L+  Y F G
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 232/489 (47%), Gaps = 6/489 (1%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           + RD ++    + L+ M   G +P+V   T  +  L +A K+ +A ++   M   G  PD
Sbjct: 239 KKRDSEM--VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPD 296

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +YT L++ LC  G +  A +L  KM+  G+  + V Y +L+      G+L+   +F  
Sbjct: 297 LVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWS 356

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           ++   G +P+  T++ L++   K R    A    D +  +G  PNL +YN L+ GL + G
Sbjct: 357 QMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAG 416

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
           R E+A++    + S G +P   +Y   +      G   +A E   +M      P IV  N
Sbjct: 417 RIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACN 476

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
             + SLA  G+   A  + + + +    P + +YN ++      G+VD  V  L +M   
Sbjct: 477 ASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            C+P+    N L   L   G+V EA+ +   + + + S     Y  +++ L ++G+  +A
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA 596

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   M     +P++ ++++L+   C    +E AL++F  M   D KPDV  +N ++ G
Sbjct: 597 IELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL--QLRQVV 549
           L K  + + +   F  + +K   P+  T   L+ G+    ++  +  + ++   Q+R  V
Sbjct: 657 LIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRV 715

Query: 550 SESAVERLV 558
           + S  E L+
Sbjct: 716 NRSFWEDLM 724



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 231/483 (47%), Gaps = 7/483 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+++A+    RM  +G  PD+V  T L+  LC A +++ A ++   M ++G  PD  
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  L++     G++    +   +ME  GY  + VT+  LV  LC   + +++    D +
Sbjct: 334 IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G++PN  TY+ L+    +   +  A+KLLD + + G +P   +Y   +    K G T
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGET 453

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A+  F  + +KG  PN+V+ N  L SL   GR  EA  +   +     +P  VTYN++
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +   +  G+ D A+ +L EM++    P     N +I  L   G+VD   +  D+M   + 
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 375 KPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
            P   TYN L  L G+GK   VQ+A  + +S+  K+ S     +  ++   C+  +   A
Sbjct: 574 SPTVVTYNTL--LSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELA 631

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++  +MT     PD  TY+++I GL  E  +  A   F  +++    PD      LL G
Sbjct: 632 LKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPG 690

Query: 492 LCKSRRTDLSLEVFQ-MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
           L K  +   ++ + +  M +     N + +  L+ G   + E++ +    +EL L  +  
Sbjct: 691 LVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICR 750

Query: 551 ESA 553
           E +
Sbjct: 751 EDS 753



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 224/505 (44%), Gaps = 39/505 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L +A      +   G  PD V    ++    K  ++ +A+ ++  M+ +G  PD     
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ L K G V  A Q+ ++M+D       VTYN+L+ GL   G + ++++  + +I K
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXK 606

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              PN  +++ LL+   K   V  A+K+   +     KP++++YN ++ GL KE +   A
Sbjct: 607 KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGR-----------------------WEE--- 291
             FF  L  K   P+ V+   LL  L   G+                       WE+   
Sbjct: 667 FWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMG 725

Query: 292 ANELLAEMDGGDRSPTIVTYN----------ILIGSLAYHGKTDHALKVLDEMVKGR-FR 340
              + AEMD        +  N           L+  L  H +  +A ++ D+  K     
Sbjct: 726 GTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGIS 785

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAI 399
           P+ ASYN +I  L      +        M +  C P+  T+N L  + G  GK+ E F +
Sbjct: 786 PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFEL 845

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
            + + +++       Y  VI+SL +     +A    Y++    F P   TY  LI GL  
Sbjct: 846 YKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            G +EEA+ +F  M +Y  KP+   FN L+ G  K   T+ + ++F+ M+ +G  P+  +
Sbjct: 906 VGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965

Query: 520 YTILVEGIAHQDELELSAEVLKELQ 544
           YTILV+ +     ++ +     EL+
Sbjct: 966 YTILVDCLCLAGRVDEALYYFNELK 990



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 228/542 (42%), Gaps = 75/542 (13%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQAT---NLLYDLCKA-NKMKKAIKVMEMMVSSGIIPDAS 134
           + D    L    S    P V+  T   N + +  +  +K++    V E M    I  D  
Sbjct: 99  MTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLD 158

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  +   L  +G +     ++ KM   G+  N  +YN L+  L   G   ++L+   R+
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           + +GL P+  TYS L+ A  K+R     M LL ++   G +PN+ ++ + +  L + G+ 
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--------------- 299
           +EA   FR +  +G  P++V+Y +L+ +LC  G+ E A EL  +M               
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 300 -----DGGDRS---------------PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
                D GD                 P +VT+ IL+  L      D A    D M K   
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY------------------ 381
            P+  +YN +I  L   G+++  +K LD M     +P   TY                  
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVE 458

Query: 382 ------------------NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
                               L  L  +G+++EA  +   L     +     Y  ++    
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + G+  +A  LL EM + G  PD    +SLI  L   G ++EA ++F  M++    P V 
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +N LL GL K  R   ++E+F+ MI K   PN  ++  L++     DE+EL+ ++  ++
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638

Query: 544 QL 545
            +
Sbjct: 639 TV 640



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 227/513 (44%), Gaps = 39/513 (7%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D+ ++  ++++A+   +RM      P VV    LL  L K  +++KAI++ E M+     
Sbjct: 550  DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCS 609

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  S+  L++C CK   V  A+++  KM       + +TYN+++ GL     +N +  F
Sbjct: 610  PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWF 669

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII-------------------- 230
              +L +K + P+  T   LL    K   +  A+ +  D +                    
Sbjct: 670  FHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728

Query: 231  --AKGGKPNLVSYNVLLTGLCKEG--------------RTEEAIRFFRDLPSK-GFEPNV 273
              A+  K  + +  ++L G+C+E               R   A + F     K G  P +
Sbjct: 729  VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788

Query: 274  VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
             SYN L+  L      E+A +L  +M     +P   T+N+L+      GK     ++  E
Sbjct: 789  ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKE 848

Query: 334  MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
            M+  R +P A +YN +I+ L     +D  +     +     +P   TY  L   L  VG+
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 393  VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            ++EA  + + + +         +  +I    + G T  A QL   M   G  PD  +Y+ 
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 453  LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
            L+  LC+ G ++EAL  F  ++     PD   +N ++ GL KS+R + +L ++  M  +G
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 513  QMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
             +P+  TY  L+  +     +E +  + +ELQL
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 216/478 (45%), Gaps = 4/478 (0%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++ ++  A     +M     KPDV+    ++Y L K NK+  A      +  S + 
Sbjct: 620  DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MH 678

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEK-MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  +   L+  L K G +G A+ +    M    +  N   +  L+ G  +   +++++ 
Sbjct: 679  PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAII 738

Query: 190  FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK-GGKPNLVSYNVLLTGL 248
            F + L+  G+         L+    K +    A ++ D    K G  P L SYN L+  L
Sbjct: 739  FAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGEL 798

Query: 249  CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
             +   TE+A   F+D+ + G  P+  ++N+LL      G+  E  EL  EM      P  
Sbjct: 799  LEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDA 858

Query: 309  VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
            +TYNI+I SLA     D AL    ++V   FRP+  +Y P+I  L   G+++  ++  ++
Sbjct: 859  ITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918

Query: 369  MFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
            M    CKPN   +N L    G +G  + A  + + + N+      + Y  ++  LC  G+
Sbjct: 919  MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978

Query: 428  TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
              +A     E+   G  PD   Y+ +I GL     +EEAL ++  M      PD+  +N+
Sbjct: 979  VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNS 1038

Query: 488  LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
            L+L L  +   + +  +++ +   G  P+  TY  L+ G +  +  E +  V K + +
Sbjct: 1039 LMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV 1096



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 224/470 (47%), Gaps = 9/470 (1%)

Query: 81  DAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D F +   +M + G+ PDVV  T L+  LCKA    +A    ++M   GI+P+  +Y  L
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  L + G +  A++L++ ME  G      TY + +      G   ++++  +++  KG+
Sbjct: 409 ICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGI 468

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           VPN    +  L +  +   +  A  + + +   G  P+ V+YN+++    K G+ +EA+ 
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
              ++   G EP+V+  N L+ SL   GR +EA ++   M     SPT+VTYN L+  L 
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLG 588

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G+   A+++ + M+  +  P+  S+N ++   C   +V+L +K   +M    CKP+  
Sbjct: 589 KEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVL 648

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYE 437
           TYN +   L    KV  AF     L  K++  P       ++  L + G+   A  +  +
Sbjct: 649 TYNTVIYGLIKENKVNHAFWFFHQL--KKSMHPDHVTICTLLPGLVKCGQIGDAISIARD 706

Query: 438 -MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF-NALLLGLCKS 495
            M +  F  +   +  L+ G  +E  +++A+ IF      +     D+F   L+  LCK 
Sbjct: 707 FMYQVRFRVNRSFWEDLMGGTLVEAEMDKAI-IFAEELVLNGICREDSFLIPLVRVLCKH 765

Query: 496 RRTDLSLEVFQMMIEK-GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +R   + ++F    +K G  P   +Y  L+  +      E + ++ K+++
Sbjct: 766 KRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK 815



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 139/272 (51%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            +  K+ + F   + M+S+  KPD +    ++  L K+N + KA+     +VSS   P   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +Y  L++ L K G +  AM+L E+M DYG   N   +N L+ G   +G+   + Q   R+
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + +G+ P+  +Y+ L++       V  A+   +++ + G  P+ ++YN ++ GL K  R 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EEA+  + ++ ++G  P++ +YN L+ +L + G  E+A  +  E+      P + TYN L
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            I   +     +HA  V   M+     P+  +Y
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 140/308 (45%)

Query: 77   HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            H    A+   + M + G  PD      LL    K+ K+ +  ++ + M+S    PDA +Y
Sbjct: 802  HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITY 861

Query: 137  TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
              +++ L K  N+  A+     +    +     TY  L+ GL  +G L ++++  + +  
Sbjct: 862  NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSD 921

Query: 197  KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
             G  PN   ++ L+    K      A +L   ++ +G +P+L SY +L+  LC  GR +E
Sbjct: 922  YGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDE 981

Query: 257  AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            A+ +F +L S G +P+ ++YN ++  L    R EEA  L  EM      P + TYN L+ 
Sbjct: 982  ALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLML 1041

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            +L   G  + A ++ +E+      P   +YN +I         +        M    C P
Sbjct: 1042 NLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNP 1101

Query: 377  NEGTYNGL 384
            N GTY  L
Sbjct: 1102 NIGTYAQL 1109



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 172/392 (43%), Gaps = 36/392 (9%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TY ++ + L + G L Q    L+++ + G V NA++Y+ L+    +      A+++   +
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
           +++G KP+L +Y+ L+  L K+  +E  +   +++   G  PNV ++ I +R L   G+ 
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           +EA E+   MD     P +VTY +LI +L   G+ ++A ++  +M     +P    Y  +
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQN 408
           + +    G +D   +   QM      P+  T+  L  +LC      EAFA          
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV------ 392

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                                        M K G  P+ +TY++LI GL   G IE+AL+
Sbjct: 393 -----------------------------MRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +   ME    +P    +   +    KS  T  ++E F+ M  KG +PN       +  +A
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483

Query: 529 HQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
               L  +  +   L+   +  +S    ++M+
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMK 515



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 35/382 (9%)

Query: 108  LCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT 166
            LCK  +   A ++ +      GI P  +SY  L+  L +      A  L + M++ G   
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821

Query: 167  NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
            +  T+N L+      G + +  +    +I +   P+A TY+ ++ +  K   +  A+   
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 227  DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             D+++   +P   +Y  L+ GL K GR EEA+R F ++   G +PN   +NIL+      
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 287  GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            G  E A +L   M      P + +Y IL+  L   G+ D AL   +E+      P   +Y
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 347  NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
            N II  L    +++  +   ++M +R   P+  TYN L +  G+                
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA--------------- 1046

Query: 407  QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                               G   QA ++  E+   G  PD +TY++LIRG  +    E A
Sbjct: 1047 -------------------GMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHA 1087

Query: 467  LEIFVVMEEYDYKPDVDNFNAL 488
              ++  M      P++  +  L
Sbjct: 1088 YTVYKNMMVDGCNPNIGTYAQL 1109


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 212/449 (47%), Gaps = 2/449 (0%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            +LN+A   +  M ++G  P  +    +L    +   ++ A  V + M   G++PD+SSY 
Sbjct: 763  RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 822

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             +V    + G +  A + +  M   G+  +  T   ++  LC  G +N+++ +  ++I  
Sbjct: 823  LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 882

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
            G  PN   ++ L++   K+  +  A ++L++++  G KPN+ ++  L+ GLCK G TE+A
Sbjct: 883  GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 942

Query: 258  IRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
             R F  L  S  ++PNV +Y  ++   C E +   A  L + M      P + TY  LI 
Sbjct: 943  FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 1002

Query: 317  SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 G    A ++++ M    F P+  +YN  I  LC + +     + L++ F    + 
Sbjct: 1003 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 1062

Query: 377  NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
            +  TY  L    C    + +A A    +      +       +I + CR+ K  ++ +L 
Sbjct: 1063 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 1122

Query: 436  YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
              +   G  P   TY+S+I   C EG I+ AL+ F  M+ +   PD   + +L+ GLCK 
Sbjct: 1123 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 1182

Query: 496  RRTDLSLEVFQMMIEKGQMPNETTYTILV 524
               D + ++++ MI++G  P E T   L 
Sbjct: 1183 SMVDEACKLYEAMIDRGLSPPEVTRVTLA 1211



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 204/408 (50%), Gaps = 2/408 (0%)

Query: 147  GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
            G +  A+ +V  M++ G   +++T N ++     LG +  +    D +  +G+VP++ +Y
Sbjct: 762  GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 821

Query: 207  SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
              ++   +++  +  A + L  +I +G  P+  +  ++LT LC+ G    AI +FR +  
Sbjct: 822  KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 881

Query: 267  KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
             GF+PN++++  L+  LC +G  ++A E+L EM      P + T+  LI  L   G T+ 
Sbjct: 882  LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 941

Query: 327  ALKVLDEMVKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A ++  ++V+   ++P+  +Y  +I   C E K++       +M  +   PN  TY  L 
Sbjct: 942  AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 1001

Query: 386  M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
               C  G    A+ ++  +G++        Y   I SLC+K +  +A++LL +    G  
Sbjct: 1002 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 1061

Query: 445  PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
             D  TY+ LI+  C +  I +AL  F  M +  ++ D+   N L+   C+ ++   S  +
Sbjct: 1062 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 1121

Query: 505  FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
            FQ+++  G +P + TYT ++     + +++L+ +    ++    V +S
Sbjct: 1122 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 1169



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 199/448 (44%), Gaps = 7/448 (1%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            RD K+ +A   L  M+ +G  PD    T +L  LC+   + +AI     M+  G  P+  
Sbjct: 830  RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI 889

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++T L++ LCKKG++  A +++E+M   G+  N  T+ +L+ GLC  G   ++ +   +L
Sbjct: 890  NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 949

Query: 195  IQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
            ++     PN  TY+ ++    KE  ++ A  L   +  +G  PN+ +Y  L+ G CK G 
Sbjct: 950  VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 1009

Query: 254  TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
               A      +  +GF PN+ +YN  + SLC + R  EA ELL +          VTY I
Sbjct: 1010 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 1069

Query: 314  LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
            LI         + AL     M K  F       N +IA  C + K+    +    +    
Sbjct: 1070 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 1129

Query: 374  CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
              P + TY  + +  C  G +  A     ++  +    P  F Y  +I+ LC+K    +A
Sbjct: 1130 LIPTKETYTSMISCYCKEGDIDLALKYFHNM-KRHGCVPDSFTYGSLISGLCKKSMVDEA 1188

Query: 432  FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
             +L   M   G +P   T  +L    C      ++    +++E  D K  +     L+  
Sbjct: 1189 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRN---DSANAMILLEPLDKKLWIRTVRTLVRK 1245

Query: 492  LCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            LC  ++  ++   FQ ++EK    +  T
Sbjct: 1246 LCSEKKVGVAALFFQKLLEKDSSADRVT 1273



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 215/462 (46%), Gaps = 3/462 (0%)

Query: 104  LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
            +L +  +  ++ +A+ ++  M + G+ P + +   ++    + G + YA  + ++M   G
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 164  YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
               ++ +Y  +V G    G + ++ ++L  +IQ+G +P+  T + +L A  +   V+ A+
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 224  KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                 +I  G KPNL+++  L+ GLCK+G  ++A     ++   G++PNV ++  L+  L
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 284  CMEGRWEEANELLAEMDGGDR-SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
            C  G  E+A  L  ++   D   P + TY  +IG      K + A  +   M +    P+
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 343  AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQ 401
              +Y  +I   C  G      + ++ M      PN  TYN  +  LC   +  EA+ ++ 
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053

Query: 402  SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
               +    +    Y  +I   C++    QA      M K GF  D    + LI   C + 
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 1113

Query: 462  LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
             ++E+  +F ++      P  + + +++   CK    DL+L+ F  M   G +P+  TY 
Sbjct: 1114 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 1173

Query: 522  ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
             L+ G+  +  ++ + + L E  + + +S   V R+ + Y++
Sbjct: 1174 SLISGLCKKSMVDEACK-LYEAMIDRGLSPPEVTRVTLAYEY 1214



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 146/314 (46%), Gaps = 3/314 (0%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            ++ KLN A +   RM  +G  P+V   T L+   CKA    +A ++M +M   G +P+  
Sbjct: 971  KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 1030

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +Y   ++ LCKK     A +L+ K    G   + VTY  L++  C   ++NQ+L F  R+
Sbjct: 1031 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 1090

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + G   +    + L+ A  +++ +  + +L   +++ G  P   +Y  +++  CKEG  
Sbjct: 1091 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 1150

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            + A+++F ++   G  P+  +Y  L+  LC +   +EA +L   M     SP  VT   L
Sbjct: 1151 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 1210

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                     + +A+ +L+ + K  +     +   ++ +LCSE KV +      ++  +  
Sbjct: 1211 AYEYCKRNDSANAMILLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDS 1267

Query: 375  KPNEGTYNGLAMLC 388
              +  T       C
Sbjct: 1268 SADRVTLAAFTTAC 1281



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 3/267 (1%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D+  +  +  +A+  L +  S G + D V  T L+ + CK N + +A+     M  +G  
Sbjct: 1037 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE 1096

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
             D      L+   C++  +  + +L + +   G      TY S++   C  G+++ +L++
Sbjct: 1097 ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKY 1156

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
               + + G VP++FTY  L+    K+  V  A KL + +I +G  P  V+   L    CK
Sbjct: 1157 FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 1216

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
               +  A+     L  K +   + +   L+R LC E +   A     ++   D S   VT
Sbjct: 1217 RNDSANAMILLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVT 1273

Query: 311  YNILIGSLAYHGKTDHALKVLDEMVKG 337
                  + +  GK +    + + + +G
Sbjct: 1274 LAAFTTACSESGKNNLVTDLTERISRG 1300



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 35/176 (19%)

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT------------------ 444
           L N       E  + ++ +    G+  +A  ++ +M   G T                  
Sbjct: 739 LANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGL 798

Query: 445 -----------------PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
                            PDS +Y  ++ G   +G I+EA      M +  + PD      
Sbjct: 799 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 858

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +L  LC++   + ++  F+ MI+ G  PN   +T L++G+  +  ++ + E+L+E+
Sbjct: 859 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 914


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 224/503 (44%), Gaps = 52/503 (10%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMM-----VSSGIIPDASSYTYLVNCLCKKG 147
           G  PDV     LL  L  A +M  A +V + M      SSGI+  A  Y       C+ G
Sbjct: 138 GATPDVFTRNALLEALSAAGRMDLARRVFDAMPARNEFSSGIL--ARGY-------CRAG 188

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
               A+ +++ M +     N V  N++V G C  G ++++ + +DR+  +GL PN  T++
Sbjct: 189 RSADALAVLDAMPEM----NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFN 244

Query: 208 FLLEAAYKERGVHAAMKLLDDI---IAKG-GKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
             + A  K   V  A ++ +D+     +G  +P+ V+++V+L+G C  G  +EA      
Sbjct: 245 GRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDI 304

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   GF   V SYN  L  L   GR  EA ELL+EM      P   TYNI++  L   GK
Sbjct: 305 MRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGK 364

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
                +V D +  G   P   +Y  ++   CS+G      + LD+M  + C PN  TYN 
Sbjct: 365 AFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNV 424

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L   L   G+  E   +++ +  K  S        +I  LCR  K   A  ++  M   G
Sbjct: 425 LLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEG 484

Query: 443 -----------------------FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
                                    PD  TYS+L+  LC EG  +EA +  V M   D  
Sbjct: 485 RLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDIS 544

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           PD   ++  + G C   +T L+++V + M ++   P+  +Y +L+ G     E + S E+
Sbjct: 545 PDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGF---QEKQKSDEI 601

Query: 540 LKELQLRQVVSESAVERLVMQYD 562
           LK   L   + E  +   VM Y+
Sbjct: 602 LK---LMSEMKEKGISSNVMTYN 621



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 228/459 (49%), Gaps = 19/459 (4%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           ++V    ++   C+  ++ +A ++++ M + G+ P+  ++   ++ LCK G V  A ++ 
Sbjct: 204 NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIF 263

Query: 157 EKMED---YGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             M++    G P  + VT++ ++ G C  G ++++   +D +   G +    +Y+  L  
Sbjct: 264 NDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSG 323

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K   V  A +LL ++  +G +PN  +YN+++ GLCKEG+  +  R    + S    P+
Sbjct: 324 LVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPD 383

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           VV+Y  LL + C +G    AN +L EM     +P + TYN+L+ SL   G+T    ++L+
Sbjct: 384 VVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLE 443

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK 392
            M +  +    AS N II  LC   K+++ +  +D M+      NEG          + +
Sbjct: 444 RMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMW------NEGRL-------ALRR 490

Query: 393 VQEAFAIIQSLGNKQNSS-PQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           +  +F  + S  +   S  P    Y  ++ +LC++G+  +A + L EM     +PDS  Y
Sbjct: 491 LGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIY 550

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            + I G CM G    A+++   ME+    P   ++N L+ G  + +++D  L++   M E
Sbjct: 551 DTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKE 610

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           KG   N  TY  L++    +  +  +  +L E+   ++V
Sbjct: 611 KGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIV 649



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 221/464 (47%), Gaps = 30/464 (6%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV---MEMMVSSGII- 130
           R+ ++++A   ++RM ++G  P+VV     +  LCKA ++ +A ++   M+     G+  
Sbjct: 217 REGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPR 276

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  +++  C  G V  A  LV+ M   G+     +YN  + GL   G + ++ + 
Sbjct: 277 PDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQEL 336

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG-GKPNLVSYNVLLTGLC 249
           L  +  +G+ PN++TY+ +++   KE G    ++ ++D +  G   P++V+Y  LL   C
Sbjct: 337 LSEMAHEGVQPNSYTYNIIVDGLCKE-GKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYC 395

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
            +G T  A R   ++  KG  PN+ +YN+LL+SL   GR  E   LL  M     S    
Sbjct: 396 SKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTA 455

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMV-KGRFR----------------------PSAASY 346
           + NI+I  L  + K + A+ ++D M  +GR                        P   +Y
Sbjct: 456 SCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITY 515

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGN 405
           + ++  LC EG+ D   K L +M  +   P+   Y+      C  GK   A  +++ +  
Sbjct: 516 STLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEK 575

Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
           +  +     Y  +I     K K+ +  +L+ EM + G + +  TY+SLI+  C  G++ +
Sbjct: 576 RSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNK 635

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           A+ +   M + +  P+V +F  L+   CK+     +  VF + +
Sbjct: 636 AMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVAL 679



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 110/491 (22%), Positives = 222/491 (45%), Gaps = 59/491 (12%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ ++ +A   L  M  +G +P+      ++  LCK  K     +V + + S  + PD  
Sbjct: 326 KNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVV 385

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++  C KGN   A +++++M   G   N  TYN L++ L   G   +  + L+R+
Sbjct: 386 TYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERM 445

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI-----------------------IA 231
            +KG   +  + + +++   +   +  AM ++D +                       I+
Sbjct: 446 SEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSIS 505

Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
           K   P+ ++Y+ L+  LCKEGR +EA +   ++  K   P+ V Y+  +   CM G+   
Sbjct: 506 KSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSL 565

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A ++L +M+    +P+  +YN+LI       K+D  LK++ EM +     +  +YN +I 
Sbjct: 566 AIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIK 625

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
             C  G V+  +  LD+M      PN  ++         G + +AF           S+ 
Sbjct: 626 SFCGRGMVNKAMPLLDEMLQNEIVPNVTSF---------GLLIKAFCKTADF-----SAA 671

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           Q  +   +++  +K       ++LY +       +  TY+  I     + ++E ALE+ +
Sbjct: 672 QRVFDVALSTCGQK-------EVLYCL----MCTELSTYARWIEA---KNILETALEMRI 717

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            ++ + YK        ++ GLC     D +  + ++ I KG   +  T+  +++ ++   
Sbjct: 718 SIQSFPYK-------RIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESG 770

Query: 532 ELELSAEVLKE 542
           + +  A++L E
Sbjct: 771 K-KHDADMLSE 780



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 168/414 (40%), Gaps = 61/414 (14%)

Query: 85  QLERMVSKG-HKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           ++E  V  G   PDVV  T+LL+  C       A ++++ M   G  P+  +Y  L+  L
Sbjct: 370 RVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSL 429

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL--------- 194
            K G      +L+E+M + GY  +T + N ++ GLC    L  ++  +D +         
Sbjct: 430 LKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALR 489

Query: 195 --------------IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
                         I K  +P+  TYS L+ A  KE     A K L ++I K   P+ V 
Sbjct: 490 RLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVI 549

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           Y+  + G C  G+T  AI+  RD+  +   P+  SYN+L+     + + +E  +L++EM 
Sbjct: 550 YDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMK 609

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
               S  ++TYN LI S    G  + A+ +LDEM++    P+  S+  +I   C      
Sbjct: 610 EKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFS 669

Query: 361 LVVKCLDQMFHRRCKPNEGTY------------------------------------NGL 384
              +  D      C   E  Y                                      +
Sbjct: 670 AAQRVFDVALST-CGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRII 728

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           A LC V +   A ++++    K  S     +  VI +L   GK + A  L  +M
Sbjct: 729 AGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADMLSEKM 782



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 138/335 (41%), Gaps = 48/335 (14%)

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G  P    YN LL    +E R +     ++DL   G  P+V + N LL +L   GR + A
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLA 162

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             +   M   +      +  IL       G++  AL VLD M +          N ++A 
Sbjct: 163 RRVFDAMPARNE----FSSGILARGYCRAGRSADALAVLDAMPEMNL----VVCNTVVAG 214

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNK-QNSS 410
            C EG+VD   + +D+M  +   PN  T+NG ++ LC  G+V EA+ I   +    +   
Sbjct: 215 FCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGL 274

Query: 411 PQ--------------------------------------EFYKYVITSLCRKGKTYQAF 432
           P+                                      E Y   ++ L + G+  +A 
Sbjct: 275 PRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQ 334

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           +LL EM   G  P+SYTY+ ++ GLC EG   +   +   +      PDV  + +LL   
Sbjct: 335 ELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAY 394

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           C    T  +  +   M +KG  PN  TY +L++ +
Sbjct: 395 CSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSL 429



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 3/294 (1%)

Query: 67  GNNNDTRHRDHKLNDAFLQL--ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMM 124
           G  N+ R    +L ++F+ L  +  +SK   PD +  + L+  LCK  +  +A K +  M
Sbjct: 479 GMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEM 538

Query: 125 VSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
           +   I PD+  Y   ++  C  G    A++++  ME      +T +YN L+ G       
Sbjct: 539 IGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKS 598

Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           ++ L+ +  + +KG+  N  TY+ L+++      V+ AM LLD+++     PN+ S+ +L
Sbjct: 599 DEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLL 658

Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
           +   CK      A R F D+         V Y ++   L    RW EA  +L        
Sbjct: 659 IKAFCKTADFSAAQRVF-DVALSTCGQKEVLYCLMCTELSTYARWIEAKNILETALEMRI 717

Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           S     Y  +I  L    + DHA  +L   +   +    A++ P+I  L   GK
Sbjct: 718 SIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGK 771



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 1/262 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ + ++A  +L  M+ K   PD V     ++  C   K   AIKV+  M      P   
Sbjct: 524 KEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTR 583

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+    +K      ++L+ +M++ G  +N +TYNSL++  C  G +N+++  LD +
Sbjct: 584 SYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEM 643

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q  +VPN  ++  L++A  K     AA ++ D  ++  G+  ++ Y ++ T L    R 
Sbjct: 644 LQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEVL-YCLMCTELSTYARW 702

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA                  Y  ++  LC     + A+ LL        S    T+  +
Sbjct: 703 IEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPV 762

Query: 315 IGSLAYHGKTDHALKVLDEMVK 336
           I +L+  GK   A  + ++M++
Sbjct: 763 IDALSESGKKHDADMLSEKMME 784


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 205/430 (47%), Gaps = 5/430 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV---MEMMVSSGIIP 131
           ++ +L +A   + R +  G  P+VV    ++    K   M  A+K+   ME+M    + P
Sbjct: 175 KEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKP 234

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D+ +Y   VN  CK GN+  A +  ++M       N  TY +LV G   +G+L  + +  
Sbjct: 235 DSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLC 294

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           D L++KGL+PN+  Y+ ++     E  +  A  LL D+I K   P+  +Y++++ GLC+ 
Sbjct: 295 DELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRN 354

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G   EA +F + +       +  S+N+++  LC       A +LLA M      P +VT+
Sbjct: 355 GYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTF 414

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
             LI      GK ++A++V ++M+K   +P+   YN +I     EG  D  +  +D +  
Sbjct: 415 GTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTL-R 473

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           R    +  TYN L    C  GK+ +AFA+   + N    +    Y  +I SLC+ G   Q
Sbjct: 474 RMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQ 533

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L+  M   G  PD  TY+ LI     +   EE +E+   M      PD   +  +++
Sbjct: 534 AKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVI 593

Query: 491 GLCKSRRTDL 500
            L +    + 
Sbjct: 594 PLLQEESVEF 603



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 217/465 (46%), Gaps = 8/465 (1%)

Query: 78  KLNDA--FLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           KLND   F ++ + MVS G+  +V     ++Y L K  ++ +A+ V+   + +GI P+  
Sbjct: 140 KLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVV 199

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKME---DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           ++  +++   K G +  A++LV KME         ++VTYNS V G C +GNL  + +F 
Sbjct: 200 TFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFK 259

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++ K + PN  TY+ L++   +   +  A +L D+++ KG  PN V YN ++  L  E
Sbjct: 260 KEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSME 319

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
           G  E A     D+  K   P+  +Y+I++  LC  G   EA + L  +          ++
Sbjct: 320 GDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSH 379

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N++I  L        A ++L  M      P   ++  +I R C +GKV+  ++  ++M  
Sbjct: 380 NVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIK 439

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
              KPN   YN +       G    A  +I +L  +        Y  +I   C  GK  Q
Sbjct: 440 TGEKPNLLIYNSVINGFAKEGSFDPAILLIDTL-RRMGLFDVVTYNTLIHGYCNCGKIDQ 498

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           AF L  EM   G      TY++LI  LC  G + +A E+  +M      PD   +  L+ 
Sbjct: 499 AFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILIT 558

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
              K    +  +E+   M+ KG +P+  TY  +V  +  ++ +E 
Sbjct: 559 SFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVEF 603



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 230/530 (43%), Gaps = 57/530 (10%)

Query: 78  KLNDA-FLQLERMVSKGHKP-DVVQATNLLYDLCKAN---------------KMKKAIKV 120
           + +DA F+    M   G  P +V+ A    YD+CK++                 + A +V
Sbjct: 56  RYDDALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEV 115

Query: 121 MEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM 180
           +  +   G      ++   ++ L K  +V    ++ ++M  YGY  N  T+N ++  L  
Sbjct: 116 ITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGK 175

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG---KPN 237
            G L +++  + R ++ G+ PN  T++ +++ A K   +  A+KL+  +    G   KP+
Sbjct: 176 EGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPD 235

Query: 238 LVSYNVLLTGLCKEG---------------------RT--------------EEAIRFFR 262
            V+YN  + G CK G                     RT              E A R   
Sbjct: 236 SVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCD 295

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           +L  KG  PN V YN ++  L MEG  E A+ LL++M      P   TY+I+I  L  +G
Sbjct: 296 ELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNG 355

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             + A K L  +++      A S+N +I  LC    +    + L  M+ R   P+  T+ 
Sbjct: 356 YLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFG 415

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L    C  GKV+ A  + + +           Y  VI    ++G    A  L+  + + 
Sbjct: 416 TLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRM 475

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G   D  TY++LI G C  G I++A  +F  M           +N L+  LCK+     +
Sbjct: 476 GLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQA 534

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            E+ +MM+ +G +P+  TYTIL+   + +   E   E+   + L+ VV +
Sbjct: 535 KELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPD 584



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 96/184 (52%), Gaps = 2/184 (1%)

Query: 73  RH-RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           RH +D K+ +A    E+M+  G KP+++   +++    K      AI +++ +   G+  
Sbjct: 420 RHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF- 478

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  +Y  L++  C  G +  A  L  +M + G   + VTYN+L+  LC  G++ Q+ + +
Sbjct: 479 DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELM 538

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
             ++ +GL+P+  TY+ L+ +  K+      ++L D ++ KG  P+  +Y  ++  L +E
Sbjct: 539 KMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQE 598

Query: 252 GRTE 255
              E
Sbjct: 599 ESVE 602



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 160/395 (40%), Gaps = 79/395 (20%)

Query: 177 GLCMLGNLNQ-----SLQFLDRLIQKGLVPNAFTYSF--LLEAAYKERGVHAAMKLLDDI 229
            L ++GNL        L+ LD LI    +  +    F  L+    +      A +++  +
Sbjct: 60  ALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKL 119

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
              G    + ++N  L+ L K        + ++++ S G+  NV ++N+++ +L  EGR 
Sbjct: 120 QLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRL 179

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM--VKG-RFRPSAASY 346
            EA  ++         P +VT+N++I      G  D ALK++ +M  + G   +P + +Y
Sbjct: 180 VEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTY 239

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
           N  +   C  G + +  +   +M  +  +PN  TY  L                      
Sbjct: 240 NSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATL---------------------- 277

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                       +    R G    AF+L  E+ + G  P+S  Y+S+I  L MEG +E A
Sbjct: 278 ------------VDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGA 325

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
                               +LLL       +D        MI+K   P++ TY+I++EG
Sbjct: 326 --------------------SLLL-------SD--------MIDKRIYPDQFTYSIVIEG 350

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +     L  + + L+ +    +V ++    +V+ Y
Sbjct: 351 LCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINY 385



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 19/253 (7%)

Query: 328 LKVLDEMVKGR--FRPSAASYNPIIARLCS-----EGKVDLVVKCLDQMFHRRCKPNEGT 380
           L+VLD ++      + S A ++ ++ R C+     EG  +++ K     F          
Sbjct: 76  LEVLDALISSYDICKSSPAVFDALV-RTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNF 134

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
            + L  L  V +  + +  + S G  +N +    +  +I +L ++G+  +A  ++Y   K
Sbjct: 135 LSHLLKLNDVNRFWKMYKEMVSYGYIENVNT---FNLIIYALGKEGRLVEAVSVIYRSLK 191

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEI---FVVMEEYDYKPDVDNFNALLLGLCKSRR 497
            G  P+  T++ +I G    G ++ AL++     VM     KPD   +N+ + G CK   
Sbjct: 192 TGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGN 251

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR-----QVVSES 552
             ++ E  + M+ K   PN  TY  LV+G      LE +  +  EL  +      V+  S
Sbjct: 252 LAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNS 311

Query: 553 AVERLVMQYDFEG 565
            +  L M+ D EG
Sbjct: 312 IIHWLSMEGDMEG 324


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 167/309 (54%), Gaps = 6/309 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
            + ++A+  LE MV  G  PD+   T L+   CK+ K   A++V E +V+ G  PD  +Y
Sbjct: 68  ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 127

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           + L++ LCK+G +  A+ L  +M   G    NTVTYNSL+ G C +G +++++  L+R+ 
Sbjct: 128 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 187

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  P+  TY+ L+    K   +  A  LL+ +  KG  PN+V++  L+ GLC+E R  
Sbjct: 188 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLS 247

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE-LLAEMDGGDRSPTIVTYNIL 314
           +A+    ++  K   P V +YN +L   C   + EEA + +L EMD     P +V++NI+
Sbjct: 248 DAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDC---PPNVVSFNIM 304

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR- 373
           I  L    ++  A+++++E  + R  P    Y  +I  LC E KVD   +   +M     
Sbjct: 305 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPG 364

Query: 374 CKPNEGTYN 382
           C PN  TY+
Sbjct: 365 CLPNSITYS 373



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 174/333 (52%), Gaps = 12/333 (3%)

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +   G A+Q  E++     PT  VTYNSL+ GLC     +++   L+ ++  G +P+ FT
Sbjct: 38  RRGCGAAVQDAEEV-----PT-AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFT 91

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF-RDL 264
           Y+ L+    K +    A+++ + ++A+G +P++V+Y+ L+ GLCKEGR +EAI  F R +
Sbjct: 92  YTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI 151

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            S    PN V+YN L+   C  G+ +EA  LL  M     SP +VTY  L+       + 
Sbjct: 152 KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARL 211

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG- 383
           D A  +L++M +    P+  ++  ++  LC E ++   V  L +M  + C P   TYN  
Sbjct: 212 DDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTI 271

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           L   C V +++EA   +     + +  P    +  +I  LC+  ++ +A +L+ E  +  
Sbjct: 272 LDGYCRVNQLEEARKFML---EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR 328

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             PD   Y+++I  LC E  ++EA  ++  M E
Sbjct: 329 CNPDVVMYTTVIDVLCREKKVDEACRVYRKMLE 361



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 6/311 (1%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P  V   +L+  LCKA +  +A  ++E MV SG IPD  +YT L+   CK      A+++
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG-LVPNAFTYSFLLEAAY 214
            E++   G+  + VTY+ L+ GLC  G L +++    R+I+ G  +PN  TY+ L+    
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           +   +  AM LL+ +   G  P++V+Y  L+ G CK  R ++A      +  KG  PNVV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK-VLDE 333
           ++  L+  LC E R  +A  +L EM     SPT+ TYN ++       + + A K +L+E
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE 291

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGK 392
           M      P+  S+N +I  LC   +    ++ +++   RRC P+   Y   + +LC   K
Sbjct: 292 M---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348

Query: 393 VQEAFAIIQSL 403
           V EA  + + +
Sbjct: 349 VDEACRVYRKM 359



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 164/327 (50%), Gaps = 5/327 (1%)

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           VP A TY+ L+    K      A  LL++++  G  P++ +Y  L+TG CK  ++++A+R
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSL 318
            F  L ++GF P+VV+Y+ L+  LC EGR +EA +L   M   G   P  VTYN LI   
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              GK D A+ +L+ M +    P   +Y  ++   C   ++D     L+QM  +   PN 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 379 GTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            T+  L   LC   ++ +A  I+  +  K  S     Y  ++   CR  +  +A + + E
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
             +    P+  +++ +IRGLC      EA+E+          PDV  +  ++  LC+ ++
Sbjct: 291 --EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348

Query: 498 TDLSLEVFQMMIEK-GQMPNETTYTIL 523
            D +  V++ M+E+ G +PN  TY+  
Sbjct: 349 VDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 148/263 (56%), Gaps = 3/263 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDA 133
           +  K +DA    E++V++G +PDVV  + L+  LCK  ++K+AI +   M+ SG  +P+ 
Sbjct: 101 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 160

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  L++  C+ G +  AM L+E+M + G   + VTY +L+ G C L  L+ +   L++
Sbjct: 161 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 220

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +KGL PN  T++ L++   +E  +  A+ +L ++  K   P + +YN +L G C+  +
Sbjct: 221 MTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQ 280

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            EEA +F   L      PNVVS+NI++R LC   R  EA EL+ E      +P +V Y  
Sbjct: 281 LEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 338

Query: 314 LIGSLAYHGKTDHALKVLDEMVK 336
           +I  L    K D A +V  +M++
Sbjct: 339 VIDVLCREKKVDEACRVYRKMLE 361



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 166/328 (50%), Gaps = 7/328 (2%)

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
           +P A +Y  L++ LCK      A  L+E+M   G   +  TY +L+ G C     + +L+
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGL 248
             ++L+ +G  P+  TYS L++   KE  +  A+ L   +I  G   PN V+YN L++G 
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI 308
           C+ G+ +EA+     +   G  P+VV+Y  L+   C   R ++A +LL +M     +P +
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK-CLD 367
           VT+  L+  L    +   A+ +L EM +    P+  +YN I+   C   +++   K  L+
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290

Query: 368 QMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           +M    C PN  ++N +   LC V +  EA  +++    ++ +     Y  VI  LCR+ 
Sbjct: 291 EM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREK 347

Query: 427 KTYQAFQLLYEMTKY-GFTPDSYTYSSL 453
           K  +A ++  +M +  G  P+S TYS+ 
Sbjct: 348 KVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 167/329 (50%), Gaps = 10/329 (3%)

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
           RG  AA++  +++      P  V+YN L++GLCK  R  EA     ++   G  P++ +Y
Sbjct: 39  RGCGAAVQDAEEV------PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTY 92

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
             L+   C   + ++A  +  ++      P +VTY+ LI  L   G+   A+ +   M+K
Sbjct: 93  TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 152

Query: 337 -GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
            G   P+  +YN +I+  C  GK+D  +  L++M      P+  TY  L    C + ++ 
Sbjct: 153 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 212

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           +A+ ++  +  K  +     +  ++  LCR+ +   A  +L EM +   +P  YTY++++
Sbjct: 213 DAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 272

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G C    +EEA +   ++EE D  P+V +FN ++ GLCK  R+  ++E+ +    +   
Sbjct: 273 DGYCRVNQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN 330

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKEL 543
           P+   YT +++ +  + +++ +  V +++
Sbjct: 331 PDVVMYTTVIDVLCREKKVDEACRVYRKM 359



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 2/257 (0%)

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           RW       A +   +  PT VTYN LI  L    +   A  +L+EMV     P   +Y 
Sbjct: 34  RWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYT 93

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNK 406
            +I   C   K D  ++  +Q+  R  +P+  TY+ L   LC  G+++EA  +   +   
Sbjct: 94  TLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKS 153

Query: 407 QNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
            +  P    Y  +I+  CR GK  +A  LL  M + G +PD  TY++L+ G C    +++
Sbjct: 154 GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDD 213

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A ++   M      P+V  F +L+ GLC+  R   ++ +   M  K   P   TY  +++
Sbjct: 214 AYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 273

Query: 526 GIAHQDELELSAEVLKE 542
           G    ++LE + + + E
Sbjct: 274 GYCRVNQLEEARKFMLE 290



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P    +N+L+ GLCK+ R   + ++ + M+  G +P+  TYT L+ G     + + +  V
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 540 LKELQLR 546
            ++L  R
Sbjct: 112 FEQLVAR 118


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 229/480 (47%), Gaps = 35/480 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L++AF     M+ KG  PD+V  + L+  L +A K+++   +  M ++ G+  D  
Sbjct: 287 KELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVV 346

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            ++ +++   + G++G A+++  +M   G   N VTY+ L+ GLC  G + ++     ++
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +++GL P+  TYS L++   K   +     L   ++ KG  P++V  ++L+ GL ++G  
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMM 466

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA+RFF     +G   N   +N L+       R  +  ++   M      P +VTY +L
Sbjct: 467 DEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVL 526

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  LA  G+ D AL +  +++K  F P    Y  +I   C                 ++ 
Sbjct: 527 VKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFC-----------------KKR 569

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            P  G               + F ++QS G   +      Y  +I    R+G      +L
Sbjct: 570 DPATGL--------------QIFKLMQSNGIFPDIC---IYNVLINMFFREGCVENVLEL 612

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           L E+ KYG  PD  TY+++I G C   +  +A+++F V++    +P+   F  L+   CK
Sbjct: 613 LREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCK 672

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
             R D ++ +F  M+E+G  PN  TY+ L++G    +  E SA  L E  L   VS + V
Sbjct: 673 DGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTE-SAFELYEKMLGDRVSPNIV 731



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 221/480 (46%), Gaps = 1/480 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R   L  A     RM+ +G  P+VV  + L+  LC+  ++ +A  V   ++  G+ 
Sbjct: 353 DAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE 412

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P   +Y+ L++  CK  N+     L   M   G+  + V  + L+ GL   G ++++L+F
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRF 472

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             + +++GL  N + ++ L++  ++ +     +K+   +      P++V+Y VL+ GL +
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAE 532

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +GR +EA+  F  L  KGF P+ + Y  L+   C +       ++   M      P I  
Sbjct: 533 QGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICI 592

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           YN+LI      G  ++ L++L E++K    P   +YN +I   CS       +K  + + 
Sbjct: 593 YNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLK 652

Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
             R +PN  T+  L    C  G++ +A  I  S+  +        Y  +I    +   T 
Sbjct: 653 CGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTE 712

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            AF+L  +M     +P+  +YS LI GLC +GL+EEA   F         PDV  +  L+
Sbjct: 713 SAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILI 772

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            G CK  R   ++ ++  M+  G MP++     L E      +  + + V  E  L  +V
Sbjct: 773 RGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQASIYSTVFPESPLNLLV 832



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 188/412 (45%), Gaps = 7/412 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y ++ N   K+G V   +     + + G     V  N +++GLCM   +  +  F D ++
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           + G  PN  T+S L+    KE  +  A  L + +I KG  P+LV Y++L+ GL + G+ E
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           E    F    ++G + +VV ++ ++ +    G   +A E+   M     SP +VTY+ILI
Sbjct: 328 EGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILI 387

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
             L  +G+   A  V  +++K    PS  +Y+ +I   C    +         M  +   
Sbjct: 388 NGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV 447

Query: 376 PN----EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
           P+        NGL+     G + EA         +  +     +  +I    R  +T   
Sbjct: 448 PDVVVCSMLINGLSR---QGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG 504

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++   M  Y   PD  TY+ L++GL  +G ++EAL +F  + +  + PD   +  L+ G
Sbjct: 505 LKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDG 564

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            CK R     L++F++M   G  P+   Y +L+     +  +E   E+L+E+
Sbjct: 565 FCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREI 616



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 213/472 (45%), Gaps = 7/472 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P  V +  LL+  C+   + +A+     M   G+     + + +++ L     +   
Sbjct: 136 GSNPSTVYSF-LLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           ++  E+M   G       +NS ++     G + + L F   L+++GLVP     + +L+ 
Sbjct: 195 LENYEEMCK-GLGVYEFVFNSFLK----RGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
                 +  A    D ++  G  PNLV+++ L+   CKE R +EA   +  +  KG  P+
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           +V Y+IL+  L   G+ EE N L +          +V ++ ++ +    G    A++V  
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
            M+K    P+  +Y+ +I  LC  G+V        Q+  +  +P+  TY+ L    C   
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            +++ F +   +  K +         +I  L R+G   +A +  ++  K G T ++Y ++
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFN 489

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LI G        + L+++++M  Y   PDV  +  L+ GL +  R D +L +F  +++K
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
           G  P+   Y  L++G   + +     ++ K +Q   +  +  +  +++   F
Sbjct: 550 GFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFF 601


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 215/444 (48%), Gaps = 4/444 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  KG  P      ++L  L + N+++ A      M    I  +  ++  ++N LCK+G 
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           +  A   +  ME +G     VTYN+LV+G  + G +  +   +  +  KG  P+  TY+ 
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +L     E      ++ + +I   G  P+ VSYN+L+ G    G  E A  +  ++  +G
Sbjct: 301 ILSWMCNEGRASEVLREMKEI---GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P   +YN L+  L ME + E A  L+ E+         VTYNILI     HG    A 
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF 417

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
            + DEM+    +P+  +Y  +I  LC + K     +  +++  +  KP+    N L    
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 477

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C +G +  AF++++ +     +     Y  ++  LC +GK  +A +L+ EM + G  PD 
Sbjct: 478 CAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            +Y++LI G   +G  + A  +   M    + P +  +NALL GL K++  +L+ E+ + 
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597

Query: 508 MIEKGQMPNETTYTILVEGIAHQD 531
           M  +G +PN++++  ++E +++ D
Sbjct: 598 MKSEGIVPNDSSFCSVIEAMSNLD 621



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 210/454 (46%), Gaps = 9/454 (1%)

Query: 102 TNLLYDL-----CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           + +L+DL     C+   + +AI+   +M   G  P   +  +++  L +   +  A    
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
             M      +N  T+N ++  LC  G L ++  FL  +   G+ P   TY+ L++     
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273

Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
             +  A  ++ ++ +KG +P++ +YN +L+ +C EGR  E +R  +++   G  P+ VSY
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSY 330

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           NIL+R     G  E A     EM      PT  TYN LI  L    K + A  ++ E+ +
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQE 395
                 + +YN +I   C  G         D+M     +P + TY  L  +LC   K +E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  + + +  K           ++   C  G   +AF LL EM      PD  TY+ L+R
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           GLC EG  EEA E+   M+    KPD  ++N L+ G  K   T  +  V   M+  G  P
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
              TY  L++G++   E EL+ E+L+E++   +V
Sbjct: 571 TLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 150/297 (50%), Gaps = 2/297 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKAN-KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           L  M   G  PD V + N+L   C  N  ++ A    + MV  G++P   +Y  L++ L 
Sbjct: 315 LREMKEIGLVPDSV-SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
            +  +  A  L+ ++ + G   ++VTYN L+ G C  G+  ++    D ++  G+ P  F
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TY+ L+    ++     A +L + ++ KG KP+LV  N L+ G C  G  + A    +++
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
                 P+ V+YN L+R LC EG++EEA EL+ EM      P  ++YN LI   +  G T
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            HA  V DEM+   F P+  +YN ++  L    + +L  + L +M      PN+ ++
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 174/360 (48%), Gaps = 12/360 (3%)

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           DRL  K  +     +  L+    + R V  A++    +  KG  P   + N +LT L + 
Sbjct: 148 DRLETKSTI----LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRL 203

Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
            R E A  F+ D+     + NV ++NI++  LC EG+ ++A   L  M+     PTIVTY
Sbjct: 204 NRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTY 263

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           N L+   +  G+ + A  ++ EM    F+P   +YNPI++ +C+EG+   V++   +M  
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKE 320

Query: 372 RRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKT 428
               P+  +YN L   C   G ++ AFA    +  KQ   P  FY Y  +I  L  + K 
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV-KQGMVPT-FYTYNTLIHGLFMENKI 378

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A  L+ E+ + G   DS TY+ LI G C  G  ++A  +   M     +P    + +L
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           +  LC+  +T  + E+F+ ++ KG  P+      L++G      ++ +  +LKE+ +  +
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 192/405 (47%), Gaps = 1/405 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E M   G K DVV    L+   CK  +M+ A      M   G++ +  +++  V+  CK
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G V  AM+L  +M   G   N  TY  L+ G C  G L+ ++  LD ++++G+  N  T
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++   KER V  A  +L  +   G + N + Y  L+ G      +E+A+    ++ 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +KG E ++  Y  L++ LC   + +EA  LL +MD     P  + Y  ++ +    GK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+ +L +++   F+P+  +Y  +I  LC  G +D  +   ++M      PN   Y  L 
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  G + EA  +   + +K  S  +  Y  ++    ++G  + AF L  +M   G  
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            D + Y+  I G C   ++ EA E+F  M  +   PD   +N L+
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 212/471 (45%), Gaps = 11/471 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L +A     RM   G  PDVV   +L+    K  ++ +  +++E M  SG   D  
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+NC CK G +  A      M+  G   N VT+++ V   C  G + ++++   ++
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+  N FTY+ L++   K   +  A+ LLD+++ +G   N+V+Y VL+ GLCKE + 
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA    R +   G   N + Y  L+    M    E+A  LL+EM        I  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K D A  +L +M +    P+   Y  ++      GKV   +  L ++     
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +PN  TY  L   LC  G + EA +    + +       + Y  ++  LC+ G   +A Q
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM   G + D   Y++L+ G   +G + +A  +   M +   + D+  +   + G C
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILV----------EGIAHQDELE 534
                  + EVF  MI  G  P+   Y  L+          E I+ QDE+E
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 206/450 (45%), Gaps = 36/450 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           + R+  +   P+V     ++  LCK  ++ +A  +   M   G +PD  ++  L++   K
Sbjct: 176 VRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGK 235

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +    QLVE+M   G   + VTYN+L+   C  G +  +  +   + ++G++ N  T
Sbjct: 236 CGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVT 295

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +S  ++A  KE  V  AMKL   +  +G   N  +Y  L+ G CK GR ++AI    ++ 
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G   NVV+Y +L+  LC E +  EA ++L  M+        + Y  LI     +  ++
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL +L EM         + Y  +I  LC+  K+D     L +M     +PN   Y  + 
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475

Query: 386 MLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             C   GKV EA A++Q + +                                    GF 
Sbjct: 476 DACFKSGKVPEAIAMLQKILDS-----------------------------------GFQ 500

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  TY +LI GLC  G I+EA+  F  M +    P+V  + AL+ GLCK+   + ++++
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           F  M+ KG   ++  YT L++G   Q  L 
Sbjct: 561 FNEMVHKGMSLDKVVYTALLDGYLKQGNLH 590



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 93/188 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+ +A   L++++  G +P+V+    L+  LCKA  + +AI     M   G+ 
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT LV+ LCK G +  A+QL  +M   G   + V Y +L+ G    GNL+ +   
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++I  GL  + F Y+  +        +  A ++  ++I  G  P+   YN L++   K
Sbjct: 596 KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQK 655

Query: 251 EGRTEEAI 258
            G  EEAI
Sbjct: 656 LGNLEEAI 663


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 213/439 (48%), Gaps = 3/439 (0%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY-PT 166
           L  A  + KAI +   + +    P A +Y  ++  L  +G      +L  +M + G+   
Sbjct: 169 LGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHP 228

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +TVTY++L+   C LG  + +++ L+ + + G+ P A  Y+ ++   +K   VH A+ L 
Sbjct: 229 DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLF 288

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
           +++     +P++ +Y  L+ GL K GR +EA  F+ ++  +  +P+ V  N ++  L   
Sbjct: 289 EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKA 348

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSL-AYHGKTDHALKVLDEMVKGRFRPSAAS 345
           GR ++  +L  EM      P +VTYN +I +L     +        + M      PS  +
Sbjct: 349 GRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFT 408

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQE-AFAIIQSLG 404
           Y+ +I   C   +++  +  L++M  +   P    Y  L    G  K  + A  + Q L 
Sbjct: 409 YSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
               SS    Y  +I  L + G+   A  L  EM+K G TP+ Y Y++L+ GL    +++
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLD 528

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EAL     M+E+   PD++++N +L GL K+     ++E+   M      P+  +Y  ++
Sbjct: 529 EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVL 588

Query: 525 EGIAHQDELELSAEVLKEL 543
             ++H    E +AE++KE+
Sbjct: 589 SALSHAGMFEEAAELMKEM 607



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 190/412 (46%), Gaps = 9/412 (2%)

Query: 89  MVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           M ++GH  PD V  + L+   CK  +   AI+++  M  +G+ P A  YT +++   K  
Sbjct: 220 MSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLD 279

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           NV  A+ L E+M       +  TY  L+RGL   G ++++  F   + ++   P+    +
Sbjct: 280 NVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMN 339

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGRTEEAIRFFRDLPS 266
            ++    K   +   +KL +++      PN+V+YN ++  L + + R  E   +F  +  
Sbjct: 340 NMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKG 399

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P+  +Y+IL+   C   R E+A  LL EMD     P    Y  LI +L    + D 
Sbjct: 400 SGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN---- 382
           A ++  E+ +     SA  Y  +I  L   G++D  +   D+M    C PN   YN    
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMS 519

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           GLA  C    + EA   ++ +           Y  ++  L + G  ++A ++L  M    
Sbjct: 520 GLARAC---MLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNST 576

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             PD+ +Y++++  L   G+ EEA E+   M    ++ D+  ++++L  + K
Sbjct: 577 IKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 193/455 (42%), Gaps = 45/455 (9%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN---LNQSL 188
           D S+Y  L++CL      G   +++++M     P   VT   L + + MLGN   + +++
Sbjct: 122 DTSTYMALIHCLELVEQYGEMWKMIQEM--VRSPICVVTPMELSQVIRMLGNAKMIGKAI 179

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTG 247
               ++  +   P A  Y+ ++     E       +L +++  +G   P+ V+Y+ L++ 
Sbjct: 180 TIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISA 239

Query: 248 LCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
            CK GR + AIR   ++   G +P    Y +++           A  L  EM      P 
Sbjct: 240 FCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPD 299

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
           + TY  LI  L   G+ D A     EM +   +P     N +I  L   G++D  +K  +
Sbjct: 300 VFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFE 359

Query: 368 QMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR 424
           +M    C PN  TYN +  A+     +V E F+  + +      SP  F Y  +I   C+
Sbjct: 360 EMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKG-SGISPSPFTYSILIDGFCK 418

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLI------------------------------ 454
             +  +A  LL EM + GF P    Y SLI                              
Sbjct: 419 TNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV 478

Query: 455 -----RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
                + L   G +++A+ +F  M +    P+V  +NAL+ GL ++   D +L   + M 
Sbjct: 479 YAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQ 538

Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           E G +P+  +Y I++ G+A       + E+L  ++
Sbjct: 539 EHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK 573



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 152/319 (47%), Gaps = 3/319 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A+     M  +  KPD V   N++  L KA ++   +K+ E M  S  IP+  +Y 
Sbjct: 315 RIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYN 374

Query: 138 YLVNCLCK-KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
            ++  L + K  V       E+M+  G   +  TY+ L+ G C    + +++  L+ + +
Sbjct: 375 TIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE 434

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           KG  P    Y  L++A  K +    A +L  ++    G  +   Y V++  L K GR ++
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDD 494

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           AI  F ++   G  PNV +YN L+  L      +EA   + +M      P I +YNI++ 
Sbjct: 495 AINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILN 554

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            LA  G    A+++L  M     +P A SYN +++ L   G  +   + + +M     + 
Sbjct: 555 GLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEY 614

Query: 377 NEGTYNGLAMLCGVGKVQE 395
           +  TY+  ++L  +GKV +
Sbjct: 615 DLITYS--SILEAIGKVDQ 631



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 1/172 (0%)

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           + ML     + +A  I   +  ++     + Y  +I  L  +G+  +  +L  EM+  G 
Sbjct: 166 IRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGH 225

Query: 444 T-PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
             PD+ TYS+LI   C  G  + A+ +   M+E   +P    +  ++    K      +L
Sbjct: 226 CHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGAL 285

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            +F+ M      P+  TYT L+ G+     ++ +     E+Q      ++ V
Sbjct: 286 SLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVV 337


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 238/540 (44%), Gaps = 73/540 (13%)

Query: 81  DAFLQ-LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           DA  Q L  M   G  P V     ++    KANK+++   V++MM      P  S+YT L
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTL 174

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +       +    + L ++M++ GY      + +L+RG    G ++ +L  LD +    L
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
             +   Y+  +++  K   V  A K   +I A G KP+ V+Y  ++  LCK  R +EA+ 
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294

Query: 260 FF------RDLP-----------------------------SKGFEPNVVSYNILLRSLC 284
            F      R +P                             +KG  P+V++YN +L  L 
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR 354

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G+ +EA ++  EM   D +P + TYNILI  L   GK D A ++ D M K    P+  
Sbjct: 355 KMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSL 403
           + N ++ RLC   K+D      ++M ++ C P+E T+  L    G VG+V +A+ + + +
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473

Query: 404 ---------------------------GNK-------QNSSPQ-EFYKYVITSLCRKGKT 428
                                      G+K       QN SP  +     +  + + G+ 
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +   +  E+    F PD+ +YS LI GL   G   E  E+F  M+E     D   +N +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + G CK  + + + ++ + M  KG  P   TY  +++G+A  D L+ +  + +E + +++
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 232/514 (45%), Gaps = 50/514 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLC-----KANKMKKAIKVMEMMVSSGI 129
           ++ +++ A   L+ M S     D+V     LY++C     K  K+  A K    + ++G+
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIV-----LYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  +YT ++  LCK   +  A+++ E +E       T  YN+++ G    G  +++  
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L+R   KG +P+   Y+ +L    K   V  A+K+ ++ + K   PNL +YN+L+  LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLC 388

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           + G+ + A      +   G  PNV + NI++  LC   + +EA  +  EMD    +P  +
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+  LI  L   G+ D A KV ++M+    R ++  Y  +I    + G+ +   K    M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508

Query: 370 FHRRCKPNEGTYN--------------GLAM----------------------LCGVGKV 393
            ++ C P+    N              G AM                      L   G  
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            E + +  S+  +        Y  VI   C+ GK  +A+QLL EM   GF P   TY S+
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I GL     ++EA  +F   +    + +V  +++L+ G  K  R D +  + + +++KG 
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688

Query: 514 MPNETTYTILVEGIAHQDELE---LSAEVLKELQ 544
            PN  T+  L++ +   +E+    +  + +KEL+
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 216/471 (45%), Gaps = 3/471 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGI 129
           D   R  KL+ AF   + M   G  P+V +  N++ D LCK+ K+ +A  + E M     
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNV-RTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  ++  L++ L K G V  A ++ EKM D    TN++ Y SL++     G      +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
               +I +   P+    +  ++  +K         + ++I A+   P+  SY++L+ GL 
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G   E    F  +  +G   +  +YNI++   C  G+  +A +LL EM      PT+V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  +I  LA   + D A  + +E    R   +   Y+ +I      G++D     L+++
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683

Query: 370 FHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +   PN  T+N  L  L    ++ EA    QS+   + +  Q  Y  +I  LC+  K 
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +AF    EM K G  P + +Y+++I GL   G I EA  +F   +     PD   +NA+
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           + GL    R   +  +F+    +G   +  T  +L++ +   D LE +A V
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 223/477 (46%), Gaps = 2/477 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A+  LER  +KG  P V+    +L  L K  K+ +A+KV E M      P+ S+Y 
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYN 381

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC+ G +  A +L + M+  G   N  T N +V  LC    L+++    + +  K
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+  T+  L++   K   V  A K+ + ++    + N + Y  L+      GR E+ 
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + ++D+ ++   P++   N  +  +   G  E+   +  E+      P   +Y+ILI  
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  +   ++   M +        +YN +I   C  GKV+   + L++M  +  +P 
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  L  + ++ EA+ + +   +K+       Y  +I    + G+  +A+ +L 
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+ + G TP+ YT++SL+  L     I EAL  F  M+E    P+   +  L+ GLCK R
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           + + +   +Q M ++G  P+  +YT ++ G+A    +  +  +    +    V +SA
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 227/493 (46%), Gaps = 20/493 (4%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD KL +A   L  M   G  P+ +    ++           A    + M+  G  P   
Sbjct: 443 RDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 502

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+  LCK GN+  A + + ++       ++V YN+L+   C  GNL++++   D++
Sbjct: 503 TYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 562

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTGLCKEGR 253
           +Q  ++P+++TYS LL    ++     A+ L    + +G   PN V Y  L+ GL K G 
Sbjct: 563 VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 622

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            + A  FF ++  KG  P+ V++N ++ S    G+  +AN+  + M      P + TYNI
Sbjct: 623 PKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNI 682

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+   +        L +   M++    P   +++ +I  L   G  DL VK L +M    
Sbjct: 683 LLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEE 742

Query: 374 CK------------PNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
                         P    Y    NG+   C VG +Q AF +   +      S +     
Sbjct: 743 STVVLHEMLENGVIPKHAQYITLINGM---CRVGDIQGAFKLKDEMEALGFGSHEVAESA 799

Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
           ++  L   GKT  A  +L  M +    P   T+++L+   C +  I EAL++  VME   
Sbjct: 800 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 859

Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
            K DV  +N L++G+C +  +  + E+++ M  +   PN TTY +LV+ I+  + L    
Sbjct: 860 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 919

Query: 538 EVLKELQLRQVVS 550
           ++L +LQ R ++S
Sbjct: 920 KLLTDLQERGLIS 932



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 216/493 (43%), Gaps = 25/493 (5%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G KP V     +L  + K  + +    +   M   GI P+  ++  L+N LC +GN+  A
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             L+++ME+ G+    VTYN+L+   C  G    +++ +D +I KG+  +  TY+  ++ 
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 312

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
                    A  LL  +  +   PN V+YN L+ G  KEG+   A + F ++      PN
Sbjct: 313 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN 372

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDG--------GDRSPTIVTY------------- 311
            V+YN L+   C  G +EEA  LL  M+         G+ +  +  Y             
Sbjct: 373 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHF 432

Query: 312 --NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
             N+L+ SL   GK   A K L  M +    P++ +Y+ II    S G         D M
Sbjct: 433 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 492

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                 P+  TY  L   LC  G + EA   +  L     +     Y  ++   C+ G  
Sbjct: 493 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 552

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNA 487
           ++A  L  +M +    PDSYTYSSL+ GLC +G    A+ +F   M      P+   +  
Sbjct: 553 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 612

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           L+ GL K+     +   F+ M++KG  P+   +  +++  + + ++  + +    ++   
Sbjct: 613 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 672

Query: 548 VVSESAVERLVMQ 560
           V    A   +++ 
Sbjct: 673 VCPNLATYNILLH 685



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 211/485 (43%), Gaps = 27/485 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +    +     M  KG  P+V     L+  LC    +KKA  +++ M  +G +P   
Sbjct: 210 KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 269

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N  CKKG    A++L++ M   G   +  TYN  +  LC      ++   L ++
Sbjct: 270 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 329

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ + PN  TY+ L+    KE  +  A ++ +++      PN V+YN L+ G C  G  
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389

Query: 255 EEAIRFFRDLPSKGFEPNV-----------------------VSYNILLRSLCMEGRWEE 291
           EEA+R    + + G   N                         + N+L+ SLC +G+  E
Sbjct: 390 EEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 449

Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA 351
           A + L  M      P  +TY+ +I      G   +A    D+M+K    PS  +Y  ++ 
Sbjct: 450 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 509

Query: 352 RLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSS 410
            LC  G +    K L+++ +     +   YN  LA  C  G + EA A+   +  + N  
Sbjct: 510 GLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM-VQNNVL 568

Query: 411 PQEF-YKYVITSLCRKGKTYQAFQLL-YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           P  + Y  ++T LCRKGK   A  L    M +    P+   Y+ L+ GL   G  + A  
Sbjct: 569 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 628

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
            F  M +    PD   FNA++    +  +   + + F  M   G  PN  TY IL+ G +
Sbjct: 629 FFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFS 688

Query: 529 HQDEL 533
            +  L
Sbjct: 689 KKQAL 693



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 204/440 (46%), Gaps = 31/440 (7%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A++  E++   G  P   +   ++  + K         L  +M D G   N  T+N L+ 
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 241

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           GLC+ GNL ++   L ++ + G VP   TY+ LL    K+    AA++L+D +I KG + 
Sbjct: 242 GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEA 301

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           ++ +YNV +  LC   R+ +A    + +  +   PN V+YN L+     EG+   A ++ 
Sbjct: 302 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 361

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR---------------- 340
            EM   D SP  VTYN LIG   + G  + AL++LD M     R                
Sbjct: 362 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAV 421

Query: 341 -------PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
                      + N +++ LC +GK+    K L  M      PN  TY+   ++ G G +
Sbjct: 422 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYD--CIINGYGSI 479

Query: 394 QE---AFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
            +   AF+    +  K    P  F Y  ++  LC+ G   +A + L  +       DS  
Sbjct: 480 GDPLNAFSFFDDM-IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM 538

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
           Y++L+   C  G + EA+ +F  M + +  PD   +++LL GLC+  +   ++ +F   +
Sbjct: 539 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 598

Query: 510 EKGQM-PNETTYTILVEGIA 528
            +G + PN   YT LV+G++
Sbjct: 599 GRGTLFPNHVMYTCLVDGLS 618



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 5/269 (1%)

Query: 279 LLRSLCMEGRWEEA--NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           +LR LC  G   ++    L+      +  P++  +++LI      G  D+A++  + +  
Sbjct: 134 ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGL 191

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQE 395
             F+PS  + N I+A +  + + +LV     +M  +   PN GT+N L   LC  G +++
Sbjct: 192 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 251

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  +++ +           Y  ++   C+KG+   A +L+  M   G   D  TY+  I 
Sbjct: 252 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFID 311

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
            LC      +A  +   M +    P+   +N L+ G  K  +  ++ +VF  M +    P
Sbjct: 312 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 371

Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQ 544
           N  TY  L+ G  H  + E +  +L  ++
Sbjct: 372 NCVTYNALIGGHCHVGDFEEALRLLDHME 400



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 16/137 (11%)

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY--------TYSSLIRGLCMEGLIEEAL 467
           K ++  LC+ G   ++         +G   D+Y         +  LIR    EG+I+ A+
Sbjct: 132 KSILRHLCQMGIGSKSI--------FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAV 183

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           E F ++    +KP V   N +L  + K +RT+L   +F+ M +KG  PN  T+ IL+ G+
Sbjct: 184 ETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGL 243

Query: 528 AHQDELELSAEVLKELQ 544
             +  L+ +  +LK+++
Sbjct: 244 CVEGNLKKAGNLLKQME 260


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 192/405 (47%), Gaps = 1/405 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E M   G K DVV    L+   CK  +M+ A      M   G++ +  +++  V+  CK
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G V  AM+L  +M   G   N  TY  L+ G C  G L+ ++  LD ++++G+  N  T
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++   KER V  A  +L  +   G + N + Y  L+ G      +E+A+    ++ 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +KG E ++  Y  L++ LC   + +EA  LL +MD     P  + Y  ++ +    GK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+ +L +++   F+P+  +Y  +I  LC  G +D  +   ++M      PN   Y  L 
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             LC  G + EA  +   + +K  S  +  Y  ++    ++G  + AF L  +M   G  
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            D + Y+  I G C   ++ EA E+F  M  +   PD   +N L+
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 212/471 (45%), Gaps = 11/471 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L +A     RM   G  PDVV   +L+    K  ++ +  +++E M  SG   D  
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+NC CK G +  A      M+  G   N VT+++ V   C  G + ++++   ++
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +G+  N FTY+ L++   K   +  A+ LLD+++ +G   N+V+Y VL+ GLCKE + 
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA    R +   G   N + Y  L+    M    E+A  LL+EM        I  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L    K D A  +L +M +    P+   Y  ++      GKV   +  L ++     
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +PN  TY  L   LC  G + EA +    + +       + Y  ++  LC+ G   +A Q
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  EM   G + D   Y++L+ G   +G + +A  +   M +   + D+  +   + G C
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILV----------EGIAHQDELE 534
                  + EVF  MI  G  P+   Y  L+          E I+ QDE+E
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 206/450 (45%), Gaps = 36/450 (8%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           + R+  +   P+V     ++  LCK  ++ +A  +   M   G +PD  ++  L++   K
Sbjct: 176 VRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGK 235

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +    QLVE+M   G   + VTYN+L+   C  G +  +  +   + ++G++ N  T
Sbjct: 236 CGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVT 295

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           +S  ++A  KE  V  AMKL   +  +G   N  +Y  L+ G CK GR ++AI    ++ 
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G   NVV+Y +L+  LC E +  EA ++L  M+        + Y  LI     +  ++
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            AL +L EM         + Y  +I  LC+  K+D     L +M     +PN   Y  + 
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475

Query: 386 MLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
             C   GKV EA A++Q + +                                    GF 
Sbjct: 476 DACFKSGKVPEAIAMLQKILDS-----------------------------------GFQ 500

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P+  TY +LI GLC  G I+EA+  F  M +    P+V  + AL+ GLCK+   + ++++
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           F  M+ KG   ++  YT L++G   Q  L 
Sbjct: 561 FNEMVHKGMSLDKVVYTALLDGYLKQGNLH 590



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 93/188 (49%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+ +A   L++++  G +P+V+    L+  LCKA  + +AI     M   G+ 
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT LV+ LCK G +  A+QL  +M   G   + V Y +L+ G    GNL+ +   
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             ++I  GL  + F Y+  +        +  A ++  ++I  G  P+   YN L++   K
Sbjct: 596 KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQK 655

Query: 251 EGRTEEAI 258
            G  EEAI
Sbjct: 656 LGNLEEAI 663


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 202/419 (48%), Gaps = 7/419 (1%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +++A +++  M   G+ P+A++Y   +  LC+   V  A   ++ +   GYP N+  +N+
Sbjct: 229 LEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNA 288

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           ++ G C  G ++++++  D + + G VP+  +YS L++   K+  V     +L ++   G
Sbjct: 289 VIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG 348

Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
             PNLVSY+ LL GLC+ GR E A   F+ L  +GF+ + + Y+I+L   C     E   
Sbjct: 349 ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICY 408

Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
           +L  +M   +  P    Y+ LI +   H +   AL+V + M+     P+  +   ++   
Sbjct: 409 DLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGF 468

Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNS 409
            +EG +      LD++      PN  TY    NG   LC V K  + + I   +  +   
Sbjct: 469 SNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIING---LCKVNKPNDVWGIFADMIKRGYV 525

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y  +I    +     +AF+L Y+M   G  P+ +TY+SLI GLC +  + E + +
Sbjct: 526 PDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTL 585

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           F  M      PD   + +L+   CK      +LE+F+ M  +G   +   YT L+ G +
Sbjct: 586 FKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFS 644



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 216/461 (46%), Gaps = 6/461 (1%)

Query: 99  VQATN-LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY--AMQL 155
           +Q  N LL  L + N++     + + M  SG  P+  SY+ L++       +    A +L
Sbjct: 176 LQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQEL 235

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           + +ME  G   N  TY + + GLC    +  +  FL  L Q+G   N++ ++ ++     
Sbjct: 236 LSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCH 295

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           +  VH A+++ D +   G  P++ SY++L+ GLCK+G          ++   G  PN+VS
Sbjct: 296 DGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVS 355

Query: 276 YNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           Y+ LL  LC  GR E A EL   + D G +   IV Y+I++     H   +    + ++M
Sbjct: 356 YSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIV-YSIVLHGCCQHLDLEICYDLWNDM 414

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
           V   F P A +Y+ +I   C   ++   ++  + M      PN  T   L       G +
Sbjct: 415 VHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLI 474

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            EAF  +  +           Y+ +I  LC+  K    + +  +M K G+ PD+  YS +
Sbjct: 475 GEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSII 534

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G      ++EA  ++  M +   KP++  + +L+ GLC   +    + +F+ MI +G 
Sbjct: 535 IDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL 594

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            P+   YT L+     +  ++ + E+ +E++   + ++S V
Sbjct: 595 TPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFV 635



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 214/504 (42%), Gaps = 42/504 (8%)

Query: 30  PNLHSFSL-----NKGFIRVLASTQVTISPKDSVYTKPNRKP-GNNNDTRHRDHKLNDAF 83
           PN++S+S+       G    L   Q  +S  +    +PN    G       R  ++  A+
Sbjct: 209 PNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAW 268

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
             L+ +  +G+  +      +++  C   ++ KA++V + M   G +PD  SY+ LV+ L
Sbjct: 269 NFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGL 328

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK+G+V     ++ +M   G   N V+Y+SL+ GLC  G +  + +   RL  +G   + 
Sbjct: 329 CKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDH 388

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
             YS +L    +   +     L +D++     P+  +Y+ L+   C+  + +EA+  F  
Sbjct: 389 IVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFEL 448

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   G  PNVV+  IL+     EG   EA   L ++      P + TY ++I  L    K
Sbjct: 449 MICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNK 508

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            +    +  +M+K  + P    Y+ II         D  VK LD                
Sbjct: 509 PNDVWGIFADMIKRGYVPDTVLYSIII---------DGFVKALD---------------- 543

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYG 442
                    +QEAF +   + + + + P  F Y  +I  LC   K  +   L   M   G
Sbjct: 544 ---------LQEAFRLYYKMVD-EGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEG 593

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            TPD   Y+SLI   C    ++ ALEIF  ME      D   +  L+ G  K    D + 
Sbjct: 594 LTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQ 653

Query: 503 EVFQMMIEKGQMPNETTYTILVEG 526
              + M+ KG  P   TYT L+ G
Sbjct: 654 LFMEEMMNKGLTPTVVTYTDLIIG 677



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 184/408 (45%), Gaps = 1/408 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            D +++ A    + M   G  PDV   + L+  LCK   +     ++  M  +GI P+  
Sbjct: 295 HDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLV 354

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY+ L++ LC+ G V  A +L ++++D G+  + + Y+ ++ G C   +L       + +
Sbjct: 355 SYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDM 414

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +    VP+A+ YS L+ A  + R +  A+++ + +I  G  PN+V+  +L+ G   EG  
Sbjct: 415 VHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLI 474

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA  F   +   G  PN+ +Y +++  LC   +  +   + A+M      P  V Y+I+
Sbjct: 475 GEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSII 534

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I           A ++  +MV    +P+  +Y  +I  LC + K+  V+     M     
Sbjct: 535 IDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL 594

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+   Y  L A  C    ++ A  I + +  +  S+    Y  +I    +      A  
Sbjct: 595 TPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQL 654

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
            + EM   G TP   TY+ LI G    G  ++A+ ++  M +    PD
Sbjct: 655 FMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 150/359 (41%), Gaps = 79/359 (22%)

Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR------SLCMEGRWEEANEL 295
           N LL GL +  +       F D+   G  PN+ SY++L+        LC+E    EA EL
Sbjct: 180 NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLE----EAQEL 235

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
           L+EM+     P   TY   +  L    +   A   L  + +  +  ++  +N +I   C 
Sbjct: 236 LSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCH 295

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           +G+V   V+  D M  ++C                G V +  +                Y
Sbjct: 296 DGQVHKAVEVFDGM--KKC----------------GFVPDVHS----------------Y 321

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             ++  LC++G     + +L EM + G TP+  +YSSL+ GLC  G +E A E+F  +++
Sbjct: 322 SILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKD 381

Query: 476 YDYK-----------------------------------PDVDNFNALLLGLCKSRRTDL 500
             +K                                   PD  N+++L+   C+ R+   
Sbjct: 382 QGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKE 441

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           +LEVF++MI  G  PN  T TILV G +++  +  +   L +++   VV      R+++
Sbjct: 442 ALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVII 500


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 203/422 (48%), Gaps = 5/422 (1%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LC   K+++  ++++     G +P    Y  +++  CKKG++  A + +++++  G    
Sbjct: 211 LCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPT 270

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
             TY +L+ G C  G      Q L  +  +GL  N   ++ +++A +K   V  A + + 
Sbjct: 271 VETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMR 330

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            +   G  P++ +YN ++   CK GR +EA  F      +G  PN  SY  L+ + C +G
Sbjct: 331 RMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQG 390

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
            + +A  +L  +      P +V+Y   I  +  HG+ D AL V ++M++    P A  YN
Sbjct: 391 DYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYN 450

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLG 404
            +++ LC  G+   +   L +M  R  +P+   Y    ++ G    G++ EA  I + + 
Sbjct: 451 VLMSGLCKNGRFPAMKLLLSEMLDRNVQPD--VYVFATLMDGFIRNGELDEAIKIFKVII 508

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K        Y  +I   C+ GK   A   L +M      PD YTYS++I G   +  + 
Sbjct: 509 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMS 568

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            AL++F  M ++ +KP+V  + +L+ G CK      + +VF+ M     +PN  TYT LV
Sbjct: 569 SALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLV 628

Query: 525 EG 526
            G
Sbjct: 629 GG 630



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 208/444 (46%), Gaps = 34/444 (7%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ +  KG  P V     L+   CKA + +   +++  M + G+  +   +  +++   K
Sbjct: 259 LKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFK 318

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G V  A + + +M + G   +  TYN+++   C  G + ++ +FL++  ++GL+PN F+
Sbjct: 319 YGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFS 378

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+ A  K+     A  +L  I   G KP+LVSY   + G+   G  + A+     + 
Sbjct: 379 YTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMM 438

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+   YN+L+  LC  GR+     LL+EM   +  P +  +  L+     +G+ D
Sbjct: 439 EKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELD 498

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A+K+   +++    P    YN +I   C  GK+   + CL++M +    P+E TY+   
Sbjct: 499 EAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYS--- 555

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
                                           VI    ++     A ++  +M K+ F P
Sbjct: 556 -------------------------------TVIDGYVKQHDMSSALKMFGQMMKHKFKP 584

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           +  TY+SLI G C +  +  A ++F  M+ +D  P+V  +  L+ G  K+ + + +  +F
Sbjct: 585 NVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIF 644

Query: 506 QMMIEKGQMPNETTYTILVEGIAH 529
           ++M+  G  PN+ T+  L+ G+ +
Sbjct: 645 ELMLMNGCPPNDATFHYLINGLTN 668



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 207/460 (45%), Gaps = 50/460 (10%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           + RM   G  PD+     ++   CK  ++K+A + +E     G++P+  SYT L++  CK
Sbjct: 329 MRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCK 388

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           +G+   A  ++ ++ + G   + V+Y + + G+ + G ++ +L   +++++KG+ P+A  
Sbjct: 389 QGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQI 448

Query: 206 YSFLLEAAYKERGVHAAMKLL-DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           Y+ L+    K  G   AMKLL  +++ +  +P++  +  L+ G  + G  +EAI+ F+ +
Sbjct: 449 YNVLMSGLCKN-GRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVI 507

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             KG +P +V YN +++  C  G+  +A   L +M     +P   TY+ +I         
Sbjct: 508 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDM 567

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             ALK+  +M+K +F+P+  +Y  +I   C +  +    K    M      PN  TY  L
Sbjct: 568 SSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTL 627

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
                                             +    + GK  +A  +   M   G  
Sbjct: 628 ----------------------------------VGGFFKAGKPEKATSIFELMLMNGCP 653

Query: 445 PDSYTYSSLIRGLCMEG----LIEEA----------LEIFVVMEEYDYKPDVDNFNALLL 490
           P+  T+  LI GL        LIEE           L+ F +M    +   +  +N++++
Sbjct: 654 PNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIV 713

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
            LCK    D +  +   M+ KG + +   +T ++ G+ H+
Sbjct: 714 CLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHK 753



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 227/513 (44%), Gaps = 48/513 (9%)

Query: 78  KLNDAFLQLERMVSKGHKP-----DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           +++DA L L+       +P     D V  ++LL  L       +   V+E M +  + P 
Sbjct: 66  RVHDAELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPT 125

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQF 190
             +++ L+    + G++  A+QL   + +     PT  V  NSL+ GL   G ++ +LQ 
Sbjct: 126 REAFSALILAYGESGSLDRALQLFHTVREMHNCLPT-VVASNSLLNGLVKSGKVDVALQL 184

Query: 191 LDRLIQ----KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
            D+++Q     G V + +T S +++       +    +L+ D   KG  P++V YN+++ 
Sbjct: 185 YDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIID 244

Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           G CK+G  + A R  ++L  KG  P V +Y  L+   C  G +E  ++LL EM     + 
Sbjct: 245 GYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNM 304

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            +  +N +I +   +G    A + +  M +    P   +YN +I   C  G++    + L
Sbjct: 305 NVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFL 364

Query: 367 DQMFHRRCKPNEGTYNGL---------------------------------AMLCGV--- 390
           ++   R   PN+ +Y  L                                 A + GV   
Sbjct: 365 EKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVH 424

Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
           G++  A  + + +  K      + Y  +++ LC+ G+      LL EM      PD Y +
Sbjct: 425 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVF 484

Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
           ++L+ G    G ++EA++IF V+      P +  +NA++ G CK  +   +L     M  
Sbjct: 485 ATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKN 544

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
               P+E TY+ +++G   Q ++  + ++  ++
Sbjct: 545 VHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM 577



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 14/264 (5%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R+ +L++A    + ++ KG  P +V    ++   CK  KM  A+  +  M +    PD  
Sbjct: 493 RNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEY 552

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ +++   K+ ++  A+++  +M  + +  N +TY SL+ G C   ++ ++ +    +
Sbjct: 553 TYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGM 612

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               LVPN  TY+ L+   +K      A  + + ++  G  PN  +++ L+ GL     +
Sbjct: 613 KSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATS 672

Query: 255 EEAIR--------------FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
              I               FF  + S+G++  + +YN ++  LC  G  + A  LL +M 
Sbjct: 673 PVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKML 732

Query: 301 GGDRSPTIVTYNILIGSLAYHGKT 324
                   V +  ++  L + GK+
Sbjct: 733 TKGFLIDSVCFTAMLHGLCHKGKS 756



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 22/248 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           + H ++ A     +M+    KP+V+  T+L+   CK   M +A KV   M S  ++P+  
Sbjct: 563 KQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVV 622

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLC--------------M 180
           +YT LV    K G    A  + E M   G P N  T++ L+ GL               M
Sbjct: 623 TYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSM 682

Query: 181 LGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVS 240
               +  L F   ++ +G       Y+ ++    K   V  A  LL  ++ KG   + V 
Sbjct: 683 ENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVC 742

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP----NVVSYNILLRSLCMEGRWEEANELL 296
           +  +L GLC +G+++E    +R++ S           V Y++ L     +GR  EA+ +L
Sbjct: 743 FTAMLHGLCHKGKSKE----WRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVIL 798

Query: 297 AEMDGGDR 304
             +   DR
Sbjct: 799 QTLIEEDR 806



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 6/187 (3%)

Query: 366 LDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYK-YVITSLC 423
           L+ M  +  KP    ++ L +  G  G +  A  +  ++    N  P       ++  L 
Sbjct: 114 LENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLV 173

Query: 424 RKGKTYQAFQLLYEMTKY----GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK 479
           + GK   A QL  +M +     G   D+YT S +++GLC  G IEE   +          
Sbjct: 174 KSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCV 233

Query: 480 PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           P V  +N ++ G CK      +    + +  KG +P   TY  L+ G     E E   ++
Sbjct: 234 PHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQL 293

Query: 540 LKELQLR 546
           L E+  R
Sbjct: 294 LTEMAAR 300


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 236/526 (44%), Gaps = 44/526 (8%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            L  E+M+ KG  P V     +L  L  +  M KA  V E M+  GI+P   ++  +++ 
Sbjct: 188 LLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDS 247

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K G++    ++  +M+      + VTYN L+ G    G + ++ +F   + + G    
Sbjct: 248 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT 307

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            ++++ L+E   K+     A  + D+++  G  P   +YN+ +  LC  GR ++A    R
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----R 363

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           +L S    P+VVSYN L+      G++ EA+ L  ++  GD  P+IVTYN LI  L   G
Sbjct: 364 ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             + A ++ +EM      P   +Y  ++      G + +  +  D+M  +  KP+   Y 
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             A+    +G   +AF + + +    + +P    Y   I  LC+ G   +A +   ++ +
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543

Query: 441 YGFTPDSYTYSSLIRGL-----------------------------------CMEGLIEE 465
            G  PD  TY+++IRG                                       G +E+
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A +    M++   +P+V   NALL G+CK+   D +      M E+G  PN+ +YT+L+ 
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY---DFEGIEV 568
                ++ E   ++ KE+  +++  +    R + ++   D E  EV
Sbjct: 664 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV 709



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 40/343 (11%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA      ++S    PDVV    L++   K  K  +A  + + + +  I P   +Y 
Sbjct: 358 RIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC+ GN+  A +L E+M       + +TY +LV+G    GNL+ + +  D +++K
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEE 256
           G+ P+ + Y+       +      A +L ++++A     P+L  YNV + GLCK G   +
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533

Query: 257 AIRFFR-----------------------------------DLPSKGFEPNVVSYNILLR 281
           AI F R                                   ++  K   P+V++Y +L+ 
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
                GR E+A +   EM      P ++T+N L+  +   G  D A + L +M +    P
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPP 653

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           +  SY  +I++ C   K + VVK   +M  +  +P+  T+  L
Sbjct: 654 NKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 148/359 (41%), Gaps = 45/359 (12%)

Query: 209 LLEAAY--KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC---KEGRTEEAIRFFRD 263
           L+  AY   ER +   M  +DD++  G    L++  +L   L    K+   E+ +  F  
Sbjct: 134 LMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEK 193

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT------------- 310
           +  KGF P+V + NI+L+ L       +A+ +   M      PT++T             
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253

Query: 311 ----------------------YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
                                 YNILI   + +GK + A +   +M +  F  +  S+NP
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQ 407
           +I   C +G  D      D+M +    P   TYN  +  LC  G++ +A  ++ S+    
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPD 373

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             S    Y  ++    + GK  +A  L  ++      P   TY++LI GLC  G +E A 
Sbjct: 374 VVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            +   M      PDV  +  L+ G  K+    ++ EV+  M+ KG  P+   YT    G
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG 488



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L  AF     M  +G +P+V+    LLY +CKA  + +A + +  M   GI P+  SYT
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            L++  C        ++L ++M D     +  T+ +L + L    + ++ ++FL+RL+
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK-DHESREVEFLERLL 716


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 232/463 (50%), Gaps = 12/463 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M   G  PD +    L+  + K+  +  A++V + M   G+ PD   Y  +++   K
Sbjct: 171 LTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFK 230

Query: 146 KGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           +G+   A ++ E++  E+  +P+  V+YN ++ GLC  G  ++ L+  +R+ +     + 
Sbjct: 231 RGDFVKAGEMWERLLREELVFPS-VVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDL 289

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           FTYS L+    +   +  A K+ ++++ +G +P++V+ N +L GLCK G  EE    + +
Sbjct: 290 FTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEE 349

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +       NV SYNI L+ L   G+ ++A  L   +   D +    TY +++  L ++G 
Sbjct: 350 MGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSA----TYGVVVHGLCWNGY 404

Query: 324 TDHALKVLDEM--VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
            + AL+VL+E    +G       +Y+ +I  LC EG++D     ++ M  R CK N    
Sbjct: 405 VNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVC 464

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N L        K+  A  + + +  K  S     Y  +I  L R  +  +A+  + EM +
Sbjct: 465 NVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLE 524

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G+ PD  TYS+LI GL    +++ AL ++    +  +KPD+  +N ++  LC S + + 
Sbjct: 525 KGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVED 584

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +L+++  + +K +  N  T+  ++EG       E+++++   +
Sbjct: 585 ALQLYSTLRQK-KCVNLVTHNTIMEGFYKVGNCEMASKIWAHI 626



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 225/497 (45%), Gaps = 44/497 (8%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  P +     LL    ++++  +A    +   ++ + P+  +Y  L+  +CKKG     
Sbjct: 108 GCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKG 167

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             L+  M   G   + +TY +L+ G+   G+L  +L+  D + ++G+ P+   Y+ +++ 
Sbjct: 168 RGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDG 227

Query: 213 AYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEEAI------------- 258
            +K      A ++ + ++ +    P++VSYNV+++GLCK GR  E +             
Sbjct: 228 FFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKC 287

Query: 259 ----------------------RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
                                 + + ++  +G  P+VV+ N +L  LC  G  EE  EL 
Sbjct: 288 DLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELW 347

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM G      + +YNI +  L  +GK D A+ + D    G     +A+Y  ++  LC  
Sbjct: 348 EEM-GKCSLRNVRSYNIFLKGLFENGKVDDAMMLWD----GLLEADSATYGVVVHGLCWN 402

Query: 357 GKVDLVVKCLDQMFHRR--CKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
           G V+  ++ L++  HR      +E  Y+ L   LC  G++ EA  +++ +  +       
Sbjct: 403 GYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSH 462

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
               +I    +  K   A ++  EM+  G +    +Y+ LI GL       EA +    M
Sbjct: 463 VCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEM 522

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            E  +KPD+  ++ L+ GL +S   D +L ++   ++ G  P+   Y I++  +    ++
Sbjct: 523 LEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKV 582

Query: 534 ELSAEVLKELQLRQVVS 550
           E + ++   L+ ++ V+
Sbjct: 583 EDALQLYSTLRQKKCVN 599



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 9/374 (2%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E MV +G +PDVV    +L  LCKA  +++  ++ E M    +  +  SY   +  L + 
Sbjct: 313 EEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSL-RNVRSYNIFLKGLFEN 371

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK--GLVPNAF 204
           G V  AM L + + +     ++ TY  +V GLC  G +N++LQ L+    +  G+  + F
Sbjct: 372 GKVDDAMMLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEF 427

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            YS L+ A  KE  +  A  +++ +  +G K N    NVL+ G  K  + + A++ FR++
Sbjct: 428 AYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREM 487

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             KG    VVSYNIL+  L    R+ EA + + EM      P I+TY+ LIG L      
Sbjct: 488 SGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMM 547

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           D AL++  + +    +P    YN +I RLCS GKV+  ++    +  ++C  N  T+N +
Sbjct: 548 DAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTI 606

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
                 VG  + A  I   +   +       Y   +  LC  G+   A   L +    GF
Sbjct: 607 MEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGF 666

Query: 444 TPDSYTYSSLIRGL 457
            P + T++ L+R +
Sbjct: 667 LPTAITWNILVRAV 680



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 163/346 (47%), Gaps = 16/346 (4%)

Query: 209 LLEAAYKERGVHAAMKLLDDII-AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
           LL+A  K R  + A+ +   +    G  P + S+N LL    +  +   A  FF+   + 
Sbjct: 83  LLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAA 142

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
              PNV +YN+L++ +C +G +E+   LL  M G   SP  +TY  LIG +A  G    A
Sbjct: 143 RVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFA 202

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK-----PNEGTYN 382
           L+V DEM +    P    YN II      G  D V     +M+ R  +     P+  +YN
Sbjct: 203 LEVFDEMRERGVEPDVVCYNMIIDGFFKRG--DFVKA--GEMWERLLREELVFPSVVSYN 258

Query: 383 -GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             ++ LC  G+  E   I + +   +       Y  +I  L   G    A ++  EM   
Sbjct: 259 VMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGR 318

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G  PD  T ++++ GLC  G +EE  E++  M +   + +V ++N  L GL ++ + D +
Sbjct: 319 GVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDA 377

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
           + ++  ++E     +  TY ++V G+     +  + +VL+E + R+
Sbjct: 378 MMLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHRE 419



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 1/209 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  KL+ A      M  KG    VV    L+  L +A + ++A   +  M+  G  PD  
Sbjct: 473 KHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDII 532

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+  L +   +  A++L  +  D G+  + + YN ++  LC  G +  +LQ    L
Sbjct: 533 TYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTL 592

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            QK  V N  T++ ++E  YK      A K+   I+    +P+++SYN+ L GLC  GR 
Sbjct: 593 RQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRV 651

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
            +A+ F  D   +GF P  +++NIL+R++
Sbjct: 652 TDAVGFLDDALVRGFLPTAITWNILVRAV 680



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 1/246 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ +L++A   +E M  +G K +      L+    K +K+  A+KV   M   G      
Sbjct: 438 KEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVV 497

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY  L+N L +      A   V +M + G+  + +TY++L+ GL     ++ +L+   + 
Sbjct: 498 SYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQF 557

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  G  P+   Y+ ++        V  A++L   +  K    NLV++N ++ G  K G  
Sbjct: 558 LDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNC 616

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A + +  +     +P+++SYNI L+ LC  GR  +A   L +       PT +T+NIL
Sbjct: 617 EMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNIL 676

Query: 315 IGSLAY 320
           + ++ +
Sbjct: 677 VRAVIF 682



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 4/236 (1%)

Query: 327 ALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDLV-VKCLDQMFHRRCKPNEGTYNGL 384
           AL V D  V+   F PS+A ++ I+ R+ ++  + L     +    H  C P +     L
Sbjct: 26  ALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGLLLAHAPRIIAAIHCPC-PEDVPLTLL 84

Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
                     EA  + Q++ +    SP    +  ++ +     +  +A            
Sbjct: 85  KAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARV 144

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
           +P+  TY+ L++ +C +G  E+   +   M      PD   +  L+ G+ KS     +LE
Sbjct: 145 SPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALE 204

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
           VF  M E+G  P+   Y ++++G   + +   + E+ + L   ++V  S V   VM
Sbjct: 205 VFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVM 260


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 218/462 (47%), Gaps = 2/462 (0%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L+ + +++ G K DVV AT L++  C   ++ KA+ + + +VS G+ P   +Y  L+   
Sbjct: 277 LKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGC 336

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
             +G      +L  +M + G   +T  +N +++GL        ++  L+ ++  G VP+ 
Sbjct: 337 DAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTG-VPDV 395

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           FTY  L+    K + +H A+ L D +   G KP++V+Y+ LL G C++GR +EA++ + +
Sbjct: 396 FTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSE 455

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +P KGF PN V+Y  L++    +  ++ A  LL EM     S    TYNILI  L    +
Sbjct: 456 MPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNR 515

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
                ++L   +   F P+  +YN II      G +        QM  +   PN  TY  
Sbjct: 516 VCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTS 575

Query: 384 -LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            +   C       A  ++  +           Y   I + C++G   +A   L  + K G
Sbjct: 576 FIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDG 635

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            TPD   Y+S + G     ++ EA + +  M +     D + +  L+ G  K      +L
Sbjct: 636 LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFAL 695

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           E++  M+    +P++ T+T L  G+    +++ +  +L +++
Sbjct: 696 ELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMR 737



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/520 (23%), Positives = 232/520 (44%), Gaps = 38/520 (7%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           T  R     DA    + M  KG   D      ++    +      A+++ + M  +G+ P
Sbjct: 159 TTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKP 218

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D   Y   ++ LCK  +   A+Q++ KM + G+    +TY+S+V  L  +G ++++L+  
Sbjct: 219 DERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLK 278

Query: 192 DR-LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           D+ L+  G   +    + L+        V  A+ L D++++ G  P  V+Y VL+ G   
Sbjct: 279 DQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDA 338

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           EG ++E  +  R +  +G   +   +N++++ L  + RW++A  LL E+      P + T
Sbjct: 339 EGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLL-ELVVDTGVPDVFT 397

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  LI  L  H K   A+ + D+M +   +PS  +Y+ ++   C +G++D  +K   +M 
Sbjct: 398 YGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMP 457

Query: 371 HRRCKPNEGTY--------------NGLAML---------CG-------------VGKVQ 394
            +   PNE TY              N  A+L         CG             V +V 
Sbjct: 458 DKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVC 517

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
           E   +++   ++        Y  +I    + G    AF +  +M K G TP+  TY+S I
Sbjct: 518 EVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFI 577

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
            G C     + A+++ + +     +PD+  +NA +   CK      +L    ++++ G  
Sbjct: 578 DGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLT 637

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
           P+ T Y   V G  +   +  +++    +  ++VV+++ +
Sbjct: 638 PDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEI 677



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 192/449 (42%), Gaps = 35/449 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +  DA   LE +V  G  PDV     L++ LCK  K+ +A+ + + M  +G+ P   
Sbjct: 373 RDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIV 431

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   C+KG +  A++L  +M D G+P N VTY +L++G       + +   L+ +
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q G+    +TY+ L+   Y    V    ++L   +++G  P  ++YN ++ G  K G  
Sbjct: 492 RQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMM 551

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   +R +  KG  PN+V+Y   +   C     + A +LL  +      P I  YN  
Sbjct: 552 GSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAF 611

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I +    G    AL  L  ++K    P    YN  +                        
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVT----------------------- 648

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
                 Y  L M+       EA     S+  ++  +  E Y  +I    + G    A +L
Sbjct: 649 -----GYKNLKMM------AEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALEL 697

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
             EM      PD  T+++L  GLC  G I+ A  +   M   D  P++  +N L+    +
Sbjct: 698 YSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVR 757

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
             +   + ++   M+  G +P++TTY IL
Sbjct: 758 DGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 169/358 (47%), Gaps = 11/358 (3%)

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R++ +G+VP+A + + LL    +      A+ L D++  KG   +   Y+V++    + G
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              +A+R F ++   G +P+   Y I +  LC     + A ++L +M      P  +TY+
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL-----CSEGKVDLVVKCLD 367
            ++  L   G+ D AL++ D+M+      +    + ++A +     C  G+V   +   D
Sbjct: 260 SVVDVLVKVGRMDEALRLKDQMLLA----TGKKMDVVLATMLMHGYCLHGEVGKALDLFD 315

Query: 368 QMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
           ++      P   TY  L   C   G   E + + + +  +        +  VI  L R  
Sbjct: 316 EVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDK 375

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           +   A  LL  +   G  PD +TY  LI  LC    + EA+ ++  M+E   KP +  ++
Sbjct: 376 RWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYH 434

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +LLLG C+  R D +L+++  M +KG  PNE TYT L++G   +   + +  +L E++
Sbjct: 435 SLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMR 492



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 35/239 (14%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +  AF    +M  KG  P++V  T+ +   C+ N    A+K++  +   GI PD ++Y  
Sbjct: 551 MGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNA 610

Query: 139 LVNCLCKKGNVGYAMQ-LVEKMEDYGYPTNTV---------------------------- 169
            ++  CK+GN+  A+  LV  ++D   P  TV                            
Sbjct: 611 FIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQR 670

Query: 170 ------TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
                  Y +L+ G   +GN+  +L+    ++   ++P+  T++ L     +   +  A 
Sbjct: 671 VVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAK 730

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           +LLDD+      PN+V+YN+L+    ++G+ +EA +   ++ S G  P+  +Y+IL R+
Sbjct: 731 RLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRT 789



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 16/236 (6%)

Query: 22  AYGFYSQI------PNLHSF-SLNKGFIRV----LASTQVTISPKDSVYTKPNRKPGNNN 70
           A+G Y Q+      PN+ ++ S   G+ R     LA   +    +D +  +P+    N  
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGI--QPDIAAYNAF 611

Query: 71  -DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
            DT  +   ++ A   L  ++  G  PDV    + +        M +A K    M+   +
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRV 671

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + D   YT L++   K GNV +A++L  E M ++  P +  T+ +L  GLC  G+++ + 
Sbjct: 672 VADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDK-TFTALTHGLCRSGDIDGAK 730

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           + LD + +  + PN  TY+ L+ A  ++  +  A +L D++++ G  P+  +Y++L
Sbjct: 731 RLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 232/476 (48%), Gaps = 7/476 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           + ++A+  L +M   G KPDVV  T ++  LC A ++  A  V   M +S   PD  +Y 
Sbjct: 256 RFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYI 315

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++     G+    +++   M   GY  N V+Y ++V  LC +G ++++L   D + +K
Sbjct: 316 TLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEK 375

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P  ++Y+ L+    K      A++L + + A G  PN  ++ + +    K G++ +A
Sbjct: 376 GMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKA 435

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           I+ +  + SKG  P+V + N +L SL   GR   A  +  E+     SP  +TY ++I  
Sbjct: 436 IQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKC 495

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            +   K D A+    +MV+    P   + N +I  L   GK +   +   ++   + +P 
Sbjct: 496 CSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPT 555

Query: 378 EGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            GTYN L  L G+   GKV+E   +++ +           Y  V+  L + G+   A  +
Sbjct: 556 NGTYNTL--LSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDM 613

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
           LY MT+ G  PD  +Y++++ GL  E  +EEA  +F  M++    PD      +L    K
Sbjct: 614 LYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVK 672

Query: 495 SRRTDLSLE-VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           +     +L  V + +++ G   +++++  L+EGI  +  +E S E  + +  R ++
Sbjct: 673 NGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGIL 728



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 217/490 (44%), Gaps = 45/490 (9%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F +L+ M   G  PD +  T ++    KA+K  +A+     MV SG +PD  +   L++ 
Sbjct: 474 FYELKAM---GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDT 530

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           L K G    A QL  K+++        TYN+L+ GL   G + + +Q L+ + +    PN
Sbjct: 531 LYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPN 590

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ +L+   K   V+ A+ +L  +  KG  P+L SYN ++ GL KE R EEA R F 
Sbjct: 591 LITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFC 650

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE-----------------MDG---- 301
            +  K   P+  +   +L S    G  +EA   + E                 M+G    
Sbjct: 651 QM-KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKK 709

Query: 302 -GDRSPTIVTYNI--------------LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
            G         NI              LI  L  H K   A ++ ++           SY
Sbjct: 710 AGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSY 769

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSL 403
           N +I  L  E  +D+      +M    C P+E TYN   +L  +GK   V+E   + + +
Sbjct: 770 NSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYN--LILDAMGKSMRVEEMLKVQKEM 827

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
             K   S    Y  +I+ L +  +  QA  L Y +   GF+P   TY  L+ GL   G +
Sbjct: 828 HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKM 887

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            +A  +F  M EY  +P+   +N LL G   +  T+   ++F+ M+E+G  P+  +YTIL
Sbjct: 888 VDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTIL 947

Query: 524 VEGIAHQDEL 533
           ++ +     L
Sbjct: 948 IDTLCTAGRL 957



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/534 (23%), Positives = 234/534 (43%), Gaps = 50/534 (9%)

Query: 52  ISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQAT---NLLYDL 108
           + P+D       R+    +   H      D    LE   +   +P  V  T   N + +L
Sbjct: 57  VPPRDE------RRVVGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLEL 110

Query: 109 CKAN-KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
            +A+ ++    +V ++M    +  +  ++  +   +  +G +  A   +  M + G   N
Sbjct: 111 MRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLN 170

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
             TYN L+  L   G   ++++    +++ G+ P+  TYS L+ A  K+R V   + LL+
Sbjct: 171 AYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLN 230

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           ++ A+G KPN+ SY + +  L +  R +EA      +   G +P+VV++ ++++ LC  G
Sbjct: 231 EMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAG 290

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           R  +A  +  +M   D+ P  VTY  L+      G +   ++V + MV   +  +  SY 
Sbjct: 291 RLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYT 350

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQ------EAFAIIQ 401
            ++  LC  G+VD  +   D+M  +   P + +YN L  + G  K        E F  + 
Sbjct: 351 AVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSL--ISGFLKADMFDRALELFNHMN 408

Query: 402 SLG---------------NKQNSSPQEFYKY-----------------VITSLCRKGKTY 429
           + G                K   S +   +Y                 V+ SL   G+  
Sbjct: 409 ACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLG 468

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
            A ++ YE+   G +PD+ TY+ +I+        +EA+  F  M E    PDV   N+L+
Sbjct: 469 MAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLI 528

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
             L K  + + + ++F  + E    P   TY  L+ G+  + +++   ++L+E+
Sbjct: 529 DTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM 582



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 198/437 (45%), Gaps = 34/437 (7%)

Query: 87   ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
            E ++  G   D     +L+  + K   ++K+I+  E + S GI+ +      L+  LCK 
Sbjct: 685  EYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKH 744

Query: 147  GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
                 A QL  K +  G    T +YNSL+RGL     ++ +      + + G  P+ FTY
Sbjct: 745  KKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTY 804

Query: 207  SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
            + +L+A  K   V   +K+  ++  KG +   V+YN +++GL K  R E+AI  + +L S
Sbjct: 805  NLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS 864

Query: 267  KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            +GF P   +Y  LL  L   G+  +A  L  EM      P    YNIL+      G T++
Sbjct: 865  EGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTEN 924

Query: 327  ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
              ++ ++MV+    P   SY  +I  LC+ G+++  +    Q+     +P+   YN   +
Sbjct: 925  VCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYN--LL 982

Query: 387  LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
            + G+GK +                                +  +A  L  EM K G  P+
Sbjct: 983  IDGLGKSE--------------------------------RIEEAVSLFNEMKKKGIIPN 1010

Query: 447  SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
             YTY+SLI  L   G   EA +++  +    +KP V  +NAL+ G   S  TD +   + 
Sbjct: 1011 LYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYG 1070

Query: 507  MMIEKGQMPNETTYTIL 523
             MI  G  PN +TY  L
Sbjct: 1071 QMIVGGCQPNSSTYMQL 1087



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/511 (23%), Positives = 228/511 (44%), Gaps = 36/511 (7%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            +  K ++A      MV  G  PDV+   +L+  L K  K  +A ++   +    I P   
Sbjct: 498  KASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNG 557

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +Y  L++ L ++G V   MQL+E+M    YP N +TYN+++  L   G +N ++  L  +
Sbjct: 558  TYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSM 617

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL---------------------------- 226
             +KG  P+  +Y+ ++    KE  +  A ++                             
Sbjct: 618  TEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMK 677

Query: 227  -------DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
                   + I+  G   +  S++ L+ G+ K+   E++I F  ++ S+G   N      L
Sbjct: 678  EALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPL 737

Query: 280  LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
            +R LC   +  EA++L  +  G   S    +YN LI  L      D A  +  EM +   
Sbjct: 738  IRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGC 797

Query: 340  RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFA 398
             P   +YN I+  +    +V+ ++K   +M  +  +    TYN + + L    ++++A  
Sbjct: 798  GPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAID 857

Query: 399  IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
            +  +L ++  S     Y  ++  L + GK   A  L  EM +YG  P+   Y+ L+ G  
Sbjct: 858  LYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHR 917

Query: 459  MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
            + G  E   ++F  M E    PD+ ++  L+  LC + R +  L  F+ + E G  P+  
Sbjct: 918  IAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLI 977

Query: 519  TYTILVEGIAHQDELELSAEVLKELQLRQVV 549
             Y +L++G+   + +E +  +  E++ + ++
Sbjct: 978  VYNLLIDGLGKSERIEEAVSLFNEMKKKGII 1008



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 212/492 (43%), Gaps = 36/492 (7%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L  A + L  M   G   +      L+Y L K+    +A++V + MV  GI P   +Y+ 
Sbjct: 152 LRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSV 211

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+    KK +V   + L+ +ME  G   N  +Y   +R L      +++   L ++   G
Sbjct: 212 LMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSG 271

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
             P+  T++ +++       +  A  +   + A   KP+ V+Y  LL      G ++  +
Sbjct: 272 CKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVV 331

Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS- 317
             +  + + G+  N+VSY  ++ +LC  GR +EA  +  EM     SP   +YN LI   
Sbjct: 332 EVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGF 391

Query: 318 -------------------------------LAYHGKTDHALKVL---DEMVKGRFRPSA 343
                                          + Y+GK+  +LK +   + M      P  
Sbjct: 392 LKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDV 451

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQS 402
           A+ N ++  L   G++ +  +   ++      P+  TY  +   C    K  EA      
Sbjct: 452 AAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSD 511

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
           +              +I +L + GK  +A+QL +++ +    P + TY++L+ GL  EG 
Sbjct: 512 MVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGK 571

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           ++E +++   M    Y P++  +N +L  L K+   + ++++   M EKG  P+ ++Y  
Sbjct: 572 VKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNT 631

Query: 523 LVEGIAHQDELE 534
           ++ G+  ++ LE
Sbjct: 632 VMYGLIKEERLE 643



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 212/460 (46%), Gaps = 7/460 (1%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++ ++N A   L  M  KG  PD+     ++Y L K  ++++A ++   M    + 
Sbjct: 599  DCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILA 657

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD ++   ++    K G +  A+  V E +   G   +  +++SL+ G+     + +S++
Sbjct: 658  PDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIE 717

Query: 190  FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            F + +  +G++ N F    L+    K +    A +L +     G      SYN L+ GL 
Sbjct: 718  FAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLV 777

Query: 250  KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
             E   + A   F ++   G  P+  +YN++L ++    R EE  ++  EM       T V
Sbjct: 778  DENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYV 837

Query: 310  TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            TYN +I  L    + + A+ +   ++   F P+  +Y P++  L   GK+       ++M
Sbjct: 838  TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEM 897

Query: 370  FHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
                C+PN   YN   +L G    G  +    + + +  +  +   + Y  +I +LC  G
Sbjct: 898  LEYGCEPNCTIYN--ILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAG 955

Query: 427  KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
            +         ++ + G  PD   Y+ LI GL     IEEA+ +F  M++    P++  +N
Sbjct: 956  RLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYN 1015

Query: 487  ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            +L+L L K+ +   + ++++ ++ KG  P+  TY  L+ G
Sbjct: 1016 SLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRG 1055



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 140/301 (46%), Gaps = 3/301 (0%)

Query: 81   DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
            D F +++R+   G  PD      +L  + K+ ++++ +KV + M   G      +Y  ++
Sbjct: 787  DLFTEMKRL---GCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTII 843

Query: 141  NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
            + L K   +  A+ L   +   G+     TY  L+ GL   G +  +    + +++ G  
Sbjct: 844  SGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCE 903

Query: 201  PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            PN   Y+ LL             +L + ++ +G  P++ SY +L+  LC  GR  + + +
Sbjct: 904  PNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCY 963

Query: 261  FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
            FR L   G EP+++ YN+L+  L    R EEA  L  EM      P + TYN LI  L  
Sbjct: 964  FRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGK 1023

Query: 321  HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             GK   A ++ +E+++  ++PS  +YN +I      G  D       QM    C+PN  T
Sbjct: 1024 AGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSST 1083

Query: 381  Y 381
            Y
Sbjct: 1084 Y 1084



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 113/237 (47%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            +  +L  A      ++S+G  P       LL  L K+ KM  A  +   M+  G  P+ +
Sbjct: 848  KSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCT 907

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
             Y  L+N     GN     QL EKM + G   +  +Y  L+  LC  G LN  L +  +L
Sbjct: 908  IYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQL 967

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             + GL P+   Y+ L++   K   +  A+ L +++  KG  PNL +YN L+  L K G+ 
Sbjct: 968  HELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKA 1027

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
             EA + + +L  KG++P+V +YN L+R   + G  + A     +M  G   P   TY
Sbjct: 1028 AEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 70/136 (51%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            DT     +LND      ++   G +PD++    L+  L K+ ++++A+ +   M   GII
Sbjct: 949  DTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGII 1008

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            P+  +Y  L+  L K G    A Q+ E++   G+  +  TYN+L+RG  + G+ + +   
Sbjct: 1009 PNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAA 1068

Query: 191  LDRLIQKGLVPNAFTY 206
              ++I  G  PN+ TY
Sbjct: 1069 YGQMIVGGCQPNSSTY 1084



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           R G   Q F L   M K     +  T++++  G+ +EG +  A     VM E     +  
Sbjct: 116 RVGDMAQVFDL---MQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAY 172

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            +N L+  L KS     ++EV++ M+E G  P+  TY++L+     + +++    +L E+
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232

Query: 544 QLRQV 548
           + R V
Sbjct: 233 EARGV 237


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 236/540 (43%), Gaps = 73/540 (13%)

Query: 81  DAFLQ-LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           DA  Q L  M   G  P V     ++    KANK+++   V++ M      P  S+YT L
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTL 174

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +       +    + L ++M++ GY      + +L+RG    G ++ +L  LD +    L
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
             +   Y+  +++  K   V  A K   +I A G KP+ V+Y  ++  LCK  R +EA+ 
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294

Query: 260 FF------RDLP-----------------------------SKGFEPNVVSYNILLRSLC 284
            F      R +P                             +KG  P+V++YN +L  L 
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR 354

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G+ +EA  +  EM   D +P + TYNILI  L   GK D A ++ D M K    P+  
Sbjct: 355 KMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVR 413

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKVQEAFAIIQSL 403
           + N ++ RLC   K+D      +QM ++ C P+E T+  L    G VG+V +A+ I + +
Sbjct: 414 TVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKM 473

Query: 404 ---------------------------GNK-------QNSSPQ-EFYKYVITSLCRKGKT 428
                                      G+K       QN SP  +     +  + + G+ 
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEP 533

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +   +  E+    F PD+ +YS LI GL   G   E  E+F  M+E     D   +N +
Sbjct: 534 EKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
           + G CK  + + + ++ + M  KG  P   TY  +++G+A  D L+ +  + +E + +++
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 216/471 (45%), Gaps = 3/471 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGI 129
           D   R  KL+ AF   + M   G  P+V +  N++ D LCK+ K+ +A  + E M     
Sbjct: 385 DMLCRAGKLDCAFELRDSMQKAGLFPNV-RTVNIMVDRLCKSQKLDEACAIFEQMDYKVC 443

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  ++  L++ L K G V  A ++ EKM D    TN++ Y SL++     G      +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
               ++ +   P+    +  ++  +K         + ++I ++   P+  SY++L+ GL 
Sbjct: 504 IYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLI 563

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           K G   E    F  +  +G   +  +YNI++   C  G+  +A +LL EM      PT+V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  +I  LA   + D A  + +E    R   +   Y+ +I      G++D     L+++
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683

Query: 370 FHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +   PN  T+N  L  L    ++ EA    QS+   + +  Q  Y  +I  LC+  K 
Sbjct: 684 MQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            +AF    EM K G  P + +Y+++I GL   G I EA  +F   +     PD   +NA+
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
           + GL    R   +  +F+    +G   +  T  +L++ +   D LE +A V
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIV 854



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 227/475 (47%), Gaps = 12/475 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLC-----KANKMKKAIKVMEMMVSSGI 129
           ++ +++ A   L+ M S     D+V     LY++C     K  K+  A K    + ++G+
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIV-----LYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
            PD  +YT ++  LCK   +  A+++ E +E       T  YN+++ G    G  +++  
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329

Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            L+R   KG +P+   Y+ +L    K   V  A+++ ++ + K   PNL +YN+L+  LC
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEE-MKKDAAPNLSTYNILIDMLC 388

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           + G+ + A      +   G  PNV + NI++  LC   + +EA  +  +MD    +P  +
Sbjct: 389 RAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEI 448

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           T+  LI  L   G+ D A K+ ++M+    R ++  Y  +I    + G+ +   K    M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508

Query: 370 FHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
            ++ C P+    N  +  +   G+ ++  A+ + + +++       Y  +I  L + G  
Sbjct: 509 VNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFA 568

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
            + ++L Y M + G   D+  Y+ +I G C  G + +A ++   M+   ++P V  + ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628

Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + GL K  R D +  +F+    K    N   Y+ L++G      ++ +  +L+EL
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 224/477 (46%), Gaps = 2/477 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K ++A+  LER  +KG  P V+    +L  L K  K+ +A++V E M      P+ S+Y 
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAA-PNLSTYN 381

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++ LC+ G +  A +L + M+  G   N  T N +V  LC    L+++    +++  K
Sbjct: 382 ILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYK 441

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+  T+  L++   K   V  A K+ + ++    + N + Y  L+      GR E+ 
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + ++D+ ++   P++   N  +  +   G  E+   +  E+      P   +Y+ILI  
Sbjct: 502 HKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHG 561

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G  +   ++   M +        +YN +I   C  GKV+   + L++M  +  +P 
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  L  + ++ EA+ + +   +K+       Y  +I    + G+  +A+ +L 
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+ + G TP+ YT++SL+  L     I EAL  F  M+E    P+   +  L+ GLCK R
Sbjct: 682 ELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
           + + +   +Q M ++G  P+  +YT ++ G+A    +  +  +    +    V +SA
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 232/516 (44%), Gaps = 41/516 (7%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            L  E+M+ KG  P V     +L  L  +  M KA  V E M+  GI+P   ++  +++ 
Sbjct: 225 LLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDS 284

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K G++    ++  +M+      + VTYN L+ G    G + ++ +F   + + G    
Sbjct: 285 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT 344

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            ++++ L+E   K+     A  + D+++  G  P   +YN+ +  LC  GR ++A    R
Sbjct: 345 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----R 400

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           +L S    P+VVSYN L+      G++ EA+ L  ++  GD  P+IVTYN LI  L   G
Sbjct: 401 ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 460

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             + A ++ +EM      P   +Y  ++      G + +  +  D+M  +  KP+   Y 
Sbjct: 461 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 520

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             A+    +G   +AF + + +    + +P    Y   I  LC+ G   +A +   ++ +
Sbjct: 521 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 580

Query: 441 YGFTPDSYTYSSLIRGL-----------------------------------CMEGLIEE 465
            G  PD  TY+++IRG                                       G +E+
Sbjct: 581 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 640

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A +    M++   +P+V   NALL G+CK+   D +      M E+G  PN+ +YT+L+ 
Sbjct: 641 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 700

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
                ++ E   ++ KE+  +++  +    R + ++
Sbjct: 701 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKH 736



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 206/496 (41%), Gaps = 42/496 (8%)

Query: 75  RDHKL-NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           RD ++ N A    E M+  G  P V+    +L    KA  +++  K+   M    I    
Sbjct: 251 RDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE 310

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  L+N   K G +  A +    M   G+     ++N L+ G C  G  + +    D 
Sbjct: 311 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 370

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++  G+ P   TY+  + A      +  A +LL  + A    P++VSYN L+ G  K G+
Sbjct: 371 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGK 426

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA   F DL +    P++V+YN L+  LC  G  E A  L  EM      P ++TY  
Sbjct: 427 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 486

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR- 372
           L+     +G    A +V DEM++   +P   +Y          G  D   +  ++M    
Sbjct: 487 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 546

Query: 373 RCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSL-----------------GNKQNSS---- 410
              P+   YN  +  LC VG + +A    + +                 G  +N      
Sbjct: 547 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 606

Query: 411 --------PQEFYKYVITSL------CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
                    +  Y  VIT         + G+  QAFQ   EM K G  P+  T+++L+ G
Sbjct: 607 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 666

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           +C  G I+EA      MEE    P+  ++  L+   C   + +  +++++ M++K   P+
Sbjct: 667 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 726

Query: 517 ETTYTILVEGIAHQDE 532
             T+  L + +    E
Sbjct: 727 GYTHRALFKHLEKDHE 742



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 182/421 (43%), Gaps = 39/421 (9%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
            +DA+   + M++ G  P        +  LC   ++  A +++  M +    PD  SY  
Sbjct: 361 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNT 416

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++   K G    A  L + +       + VTYN+L+ GLC  GNL  + +  + +  + 
Sbjct: 417 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 476

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
           + P+  TY+ L++   K   +  A ++ D+++ KG KP+  +Y     G  + G +++A 
Sbjct: 477 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 536

Query: 259 RFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           R   ++  +    P++  YN+ +  LC  G   +A E   ++      P  VTY  +I  
Sbjct: 537 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 596

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
              +G+   A  + DEM++ R  PS  +Y  +I      G+++   +   +M  R  +PN
Sbjct: 597 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 656

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
             T+N L                                  +  +C+ G   +A++ L +
Sbjct: 657 VMTHNAL----------------------------------LYGMCKAGNIDEAYRYLCK 682

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M + G  P+ Y+Y+ LI   C     EE ++++  M + + +PD     AL   L K   
Sbjct: 683 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 742

Query: 498 T 498
           +
Sbjct: 743 S 743



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 5/247 (2%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI-IPDASSYTYLVNCLCK 145
           + M+ KG KPD    T       +     KA ++ E MV++    PD + Y   ++ LCK
Sbjct: 505 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 564

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A++   K+   G   + VTY +++RG    G    +    D +++K L P+  T
Sbjct: 565 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 624

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y  L+    K   +  A +   ++  +G +PN++++N LL G+CK G  +EA R+   + 
Sbjct: 625 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 684

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G  PN  SY +L+   C   +WEE  +L  EM   +  P   T+  L      H + D
Sbjct: 685 EEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK----HLEKD 740

Query: 326 HALKVLD 332
           H    LD
Sbjct: 741 HESMALD 747



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 148/359 (41%), Gaps = 45/359 (12%)

Query: 209 LLEAAY--KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC---KEGRTEEAIRFFRD 263
           L+  AY   ER +   M  +DD++  G    L++  +L   L    K+   E+ +  F  
Sbjct: 171 LMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEK 230

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT------------- 310
           +  KGF P+V + NI+L+ L       +A+ +   M      PT++T             
Sbjct: 231 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 290

Query: 311 ----------------------YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
                                 YNILI   + +GK + A +   +M +  F  +  S+NP
Sbjct: 291 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 350

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQ 407
           +I   C +G  D      D+M +    P   TYN  +  LC  G++ +A  ++ S+    
Sbjct: 351 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPD 410

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             S    Y  ++    + GK  +A  L  ++      P   TY++LI GLC  G +E A 
Sbjct: 411 VVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 466

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            +   M      PDV  +  L+ G  K+    ++ EV+  M+ KG  P+   YT    G
Sbjct: 467 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG 525


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 233/493 (47%), Gaps = 39/493 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+ +A + L  M+ +G+  DV+  T L+  L K+ ++K+A  +   +    ++
Sbjct: 53  DALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLV 112

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++  CK G++  A   + +ME+     N +TY+SL+ G    G L+ + + 
Sbjct: 113 PNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKV 172

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L +++ K  +PN  TY+ LL+ ++K      A+ L   +   G K N+   +  +  + +
Sbjct: 173 LRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKR 232

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR EEA      + S G +P++V+Y  L+      G+   A  L  EM   +    IVT
Sbjct: 233 SGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVT 292

Query: 311 YNILIGSLAYHGKTD----------------------------------HALKVLDEMVK 336
           +N+LI  L   GK+D                                   AL++ +EM  
Sbjct: 293 FNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 352

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEA 396
            +  P+A + N +I  LC  G+++  +  L +M      P   TY  L  +    K + A
Sbjct: 353 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNIS--SKSRRA 410

Query: 397 FAIIQS---LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
             I+Q+   L N Q    ++ Y  +I++LC+ G T +A  +L +M + G   D+ TY++L
Sbjct: 411 DTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNAL 470

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G C+   ++ A   +  M      PD++ +N LL GL K+     + ++   + ++G 
Sbjct: 471 IHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGL 530

Query: 514 MPNETTYTILVEG 526
           +PN  TY  L+ G
Sbjct: 531 VPNACTYETLMCG 543



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 205/454 (45%), Gaps = 12/454 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DAF  L +MV K   P++     LL    KA     A+ +   M   G+  +      
Sbjct: 166 LHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDA 225

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            VN + + G +  A +LV KM   G   + V Y +L+ G    G ++ +L     +  K 
Sbjct: 226 FVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKN 285

Query: 199 LVPNAFTYSFLLEAAYK-----ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +V +  T++ L+   +K        +++AM+ +      G  P+L +YN +L G  K+G 
Sbjct: 286 VVFDIVTFNVLINCLFKLGKSDTESIYSAMREM------GLSPDLATYNTMLNGNFKKGN 339

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              A+  + ++ S+   PN ++ NI++  LC  GR E A ++L EM      PT  TY I
Sbjct: 340 WTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRI 399

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+   +   + D  L+  + +V  + +     YN +I+ LC  G        L  M  R 
Sbjct: 400 LLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERG 459

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              +  TYN L    C    ++ AF    ++ +++ S   E Y  ++  L + G  ++A 
Sbjct: 460 IIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEAD 519

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            LL E+ K G  P++ TY +L+ G C     +E L I+  M    + P    +N L+   
Sbjct: 520 DLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYF 579

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            K  +   + E+   M  KG  P  TTY IL+ G
Sbjct: 580 SKMGKMKQAKELMNEMQTKGVSPTCTTYDILICG 613



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 185/432 (42%), Gaps = 59/432 (13%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++ +A   + +M S G KPD+V  TNL+    K+ K+  A+ + + M S  ++ D  
Sbjct: 232 RSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIV 291

Query: 135 SYTYLVNCLCK----------------------------------KGNVGYAMQLVEKME 160
           ++  L+NCL K                                  KGN   A++L  +M+
Sbjct: 292 TFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 351

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
                 N +T N ++ GLC  G +  ++  L  ++  GL P + TY  LL  + K R   
Sbjct: 352 SRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 411

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
             ++  + ++    K +   YN+L++ LCK G T +A    +D+  +G   +  +YN L+
Sbjct: 412 TILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALI 471

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
              C+    + A    + M     SP I TYN+L+G L+  G    A  +L E+ K    
Sbjct: 472 HGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLV 531

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLD---QMFHRRCKPNEGTYNGLAMLCG----VGKV 393
           P+A +Y  +   +C   KV    +CL    +M  +   P    YN   ML G    +GK+
Sbjct: 532 PNACTYETL---MCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYN---MLIGYFSKMGKM 585

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCR------KGKTY------QAFQLLYEMTKY 441
           ++A  ++  +  K  S     Y  +I   C        G T       +A +L  EM   
Sbjct: 586 KQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDR 645

Query: 442 GFTPDSYTYSSL 453
           GF P   T + +
Sbjct: 646 GFVPCESTQACI 657



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%)

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           LC  GK+ E   +++ +G    +     Y  ++ +L + GK  +A   L  M   G   D
Sbjct: 20  LCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFD 79

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
               + LI GL   G I+EA  +F  + + +  P+   ++AL+   CK    + +     
Sbjct: 80  VIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALH 139

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            M EK  +PN  TY+ L+ G   Q  L  + +VL+++
Sbjct: 140 EMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKM 176


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 215/492 (43%), Gaps = 36/492 (7%)

Query: 75   RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
            +D +    +     M  KG  P+V     L+  LC    +KKA  +++ M  +G +P   
Sbjct: 961  KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 1020

Query: 135  SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            +Y  L+N  CKKG    A++L++ M   G   +  TYN  +  LC      ++   L ++
Sbjct: 1021 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 1080

Query: 195  IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             ++ + PN  TY+ L+    KE  +  A ++ +++      PN V+YN L+ G C  G  
Sbjct: 1081 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 1140

Query: 255  EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EEA+R    + + G   N V+Y  LL  LC   ++E A  LL  M   D     + Y +L
Sbjct: 1141 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVL 1200

Query: 315  IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
            I  L  +G  D A++++  M K    P   +Y+ +I   C  G +    + + +M+    
Sbjct: 1201 IDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 1260

Query: 375  KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
              N+  Y+ L    C  G V EA  +   +    + +       +++SLCR GK  +A +
Sbjct: 1261 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 1320

Query: 434  LLYEMTKYGFTPDS-----------------------------------YTYSSLIRGLC 458
             L  M++ G  P+S                                   +TY SL++GLC
Sbjct: 1321 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 1380

Query: 459  MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
              G + EA +    +       D   +N LL   CKS     ++ +F  M++   +P+  
Sbjct: 1381 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 1440

Query: 519  TYTILVEGIAHQ 530
            TY+ L+ G+  +
Sbjct: 1441 TYSSLLTGLCRK 1452



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 199/426 (46%), Gaps = 17/426 (3%)

Query: 110  KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
            K   +  A++  E++   G  P   +   ++  + K         L  +M D G   N  
Sbjct: 926  KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVG 985

Query: 170  TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            T+N L+ GLC+ GNL ++   L ++ + G VP   TY+ LL    K+    AA++L+D +
Sbjct: 986  TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 1045

Query: 230  IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
            I KG + ++ +YNV +  LC   R+ +A    + +  +   PN V+YN L+     EG+ 
Sbjct: 1046 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKI 1105

Query: 290  EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
              A ++  EM   D SP  VTYN LIG   + G  + AL++LD M     R +  +Y  +
Sbjct: 1106 GVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTL 1165

Query: 350  IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM------LCGVGKVQEAFAIIQSL 403
            +  LC   K +L  + L++M     + N+     +A       LC  G + EA   +Q +
Sbjct: 1166 LNGLCKHEKFELAKRLLERM-----RVNDMVVGHIAYTVLIDGLCKNGMLDEA---VQLV 1217

Query: 404  GN--KQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            GN  K   +P    Y  +I   CR G    A +++  M + G   +   YS+LI   C  
Sbjct: 1218 GNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQH 1277

Query: 461  GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
            G + EA++++ VM    +  D    N L+  LC+  +   + +    M   G +PN  TY
Sbjct: 1278 GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 1337

Query: 521  TILVEG 526
              ++ G
Sbjct: 1338 DCIING 1343



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 221/476 (46%), Gaps = 8/476 (1%)

Query: 81   DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
            +A   L+ M + G + + V    LL  LCK  K + A +++E M  + ++    +YT L+
Sbjct: 1142 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 1201

Query: 141  NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
            + LCK G +  A+QLV  M   G   + +TY+SL+ G C +GN+  + + + R+ + GLV
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261

Query: 201  PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
             N   YS L+    +   V  AMK+   +   G   +  + NVL++ LC++G+  EA +F
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321

Query: 261  FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
               +   G  PN ++Y+ ++      G    A     +M    + P+  TY  L+  L  
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 1381

Query: 321  HGKTDHALKVLDEMVKGRFRPSAAS---YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
             G    A K L+ +    + P A     YN ++A  C  G +   V   D+M      P+
Sbjct: 1382 GGNLVEAKKFLNRL---HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 1438

Query: 378  EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLL 435
              TY+ L   LC  GK   A  +  +   +    P    Y  ++  L + G    AF   
Sbjct: 1439 SYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFF 1498

Query: 436  YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             EM K G  PD+  ++++I      G + +A + F  M  +   P++  +N LL G  K 
Sbjct: 1499 EEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKK 1558

Query: 496  RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            +     L ++  M+ +G  P++ T+  L+ G++     +L  ++L ++ +   +++
Sbjct: 1559 QALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 1614



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 204/453 (45%), Gaps = 1/453 (0%)

Query: 93   GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
            G KP V     +L  + K  + +    +   M   GI P+  ++  L+N LC +GN+  A
Sbjct: 944  GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003

Query: 153  MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
              L+++ME+ G+    VTYN+L+   C  G    +++ +D +I KG+  +  TY+  ++ 
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 1063

Query: 213  AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
                     A  LL  +  +   PN V+YN L+ G  KEG+   A + F ++      PN
Sbjct: 1064 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN 1123

Query: 273  VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
             V+YN L+   C  G +EEA  LL  M+        VTY  L+  L  H K + A ++L+
Sbjct: 1124 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLE 1183

Query: 333  EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
             M          +Y  +I  LC  G +D  V+ +  M+     P+  TY+ L    C VG
Sbjct: 1184 RMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVG 1243

Query: 392  KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
             ++ A  II  +        +  Y  +I + C+ G   +A ++   M   G   D +T +
Sbjct: 1244 NIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCN 1303

Query: 452  SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
             L+  LC +G + EA +    M      P+   ++ ++ G         +   F  MI+ 
Sbjct: 1304 VLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKC 1363

Query: 512  GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            GQ P+  TY  L++G+     L  + + L  L 
Sbjct: 1364 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLH 1396



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 204/441 (46%), Gaps = 4/441 (0%)

Query: 96   PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
            P+ V    L+   C     ++A+++++ M ++G+  +  +Y  L+N LCK      A +L
Sbjct: 1122 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 1181

Query: 156  VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            +E+M         + Y  L+ GLC  G L++++Q +  + + G+ P+  TYS L+    +
Sbjct: 1182 LERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCR 1241

Query: 216  ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
               + +A +++  +   G   N + Y+ L+   C+ G   EA++ +  +   G   +  +
Sbjct: 1242 VGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFT 1301

Query: 276  YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
             N+L+ SLC +G+  EA + L  M      P  +TY+ +I      G   +A    D+M+
Sbjct: 1302 CNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMI 1361

Query: 336  KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
            K    PS  +Y  ++  LC  G +    K L+++ +     +   YN  LA  C  G + 
Sbjct: 1362 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 1421

Query: 395  EAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL-YEMTKYGFTPDSYTYSS 452
            EA A+   +  + N  P  + Y  ++T LCRKGK   A  L    M +    P+   Y+ 
Sbjct: 1422 EAVALFDKM-VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 1480

Query: 453  LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
            L+ GL   G  + A   F  M +    PD   FNA++    +  +   + + F  M   G
Sbjct: 1481 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 1540

Query: 513  QMPNETTYTILVEGIAHQDEL 533
              PN  TY IL+ G + +  L
Sbjct: 1541 VCPNLATYNILLHGFSKKQAL 1561



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 212/457 (46%), Gaps = 4/457 (0%)

Query: 97   DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
            D V    LL + CK+  + +A+ + + MV + ++PD+ +Y+ L+  LC+KG    A+ L 
Sbjct: 1403 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 1462

Query: 157  EKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
                  G  +P N V Y  LV GL   G+   +  F + +++KG  P+   ++ ++++  
Sbjct: 1463 GTAMGRGTLFP-NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCS 1521

Query: 215  KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
            +   +  A      +   G  PNL +YN+LL G  K+      +  +  +  +G  P+ +
Sbjct: 1522 RRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKL 1581

Query: 275  SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
            +++ L+  L   G  +   +LL +M          T+NILI   +  GK   A  +++ M
Sbjct: 1582 TFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFM 1641

Query: 335  VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKV 393
                  P   +YN I   L  +         L +M      P    Y  L   +C VG +
Sbjct: 1642 NTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDI 1701

Query: 394  QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            Q AF +   +      S +     ++  L   GKT  A  +L  M +    P   T+++L
Sbjct: 1702 QGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTL 1761

Query: 454  IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
            +   C +  I EAL++  VME    K DV  +N L++G+C +  +  + E+++ M  +  
Sbjct: 1762 MHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDL 1821

Query: 514  MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
             PN TTY +LV+ I+  + L    ++L +LQ R ++S
Sbjct: 1822 CPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1858



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 219/530 (41%), Gaps = 47/530 (8%)

Query: 71   DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
            D   ++  L++A   +  M   G  PDV+  ++L+   C+   +K A +++  M  SG++
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261

Query: 131  PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
             +   Y+ L+   C+ GNV  AM++   M   G+  +  T N LV  LC  G L ++ +F
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321

Query: 191  LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            L  + + GLVPN+ TY  ++           A    DD+I  G  P+  +Y  LL GLCK
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 1381

Query: 251  EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
             G   EA +F   L       + V YN LL   C  G   EA  L  +M   +  P   T
Sbjct: 1382 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 1441

Query: 311  YNILIGSLAYHGKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
            Y+ L+  L   GK   A+ +    M +G   P+   Y  ++  L   G         ++M
Sbjct: 1442 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 1501

Query: 370  FHRRCKPNEGTYNGLAMLCG----VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
              +   P+   +N +   C     + K  + F+ ++  G   N +    Y  ++    +K
Sbjct: 1502 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLAT---YNILLHGFSKK 1558

Query: 426  GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL----------------CMEGLIEEALEI 469
                +   L   M + G  PD  T+ SLI GL                 MEG + +    
Sbjct: 1559 QALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTF 1618

Query: 470  FVVMEEYDYK-------------------PDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
             +++ +Y                      PD D +N +  GL K      S  V   M+E
Sbjct: 1619 NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 1678

Query: 511  KGQMPNETTYTILVEGIAHQDELELSAEVLKELQL----RQVVSESAVER 556
             G +P    Y  L+ G+    +++ + ++  E++        V+ESA+ R
Sbjct: 1679 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVR 1728



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 172/356 (48%), Gaps = 1/356 (0%)

Query: 170  TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
             ++ L+R     G ++ +++  + +   G  P+ +T + +L +  K++       L  ++
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 230  IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
              KG  PN+ ++N+L+ GLC EG  ++A    + +   GF P +V+YN LL   C +GR+
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 290  EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            + A EL+  M        + TYN+ I +L  + ++  A  +L +M K    P+  +YN +
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 1095

Query: 350  IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQN 408
            I     EGK+ +  +  ++M      PN  TYN L    C VG  +EA  ++  +     
Sbjct: 1096 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 1155

Query: 409  SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
               +  Y  ++  LC+  K   A +LL  M           Y+ LI GLC  G+++EA++
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 1215

Query: 469  IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            +   M +    PDV  +++L+ G C+      + E+   M   G + N+  Y+ L+
Sbjct: 1216 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLI 1271



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 34/309 (11%)

Query: 241  YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
            +++L+    KEG  + A+  F  +   GF+P+V + N++L S+  + R E    L  EM 
Sbjct: 917  FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976

Query: 301  GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                 P + T+NILI  L   G    A  +L +M +  F P+  +YN ++   C +G+  
Sbjct: 977  DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036

Query: 361  LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
              ++ +D M  +  + +  TYN                                    I 
Sbjct: 1037 AAIELIDYMICKGIEADVCTYN----------------------------------VFID 1062

Query: 421  SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
            +LC   ++ +A+ LL +M K   +P+  TY++LI G   EG I  A ++F  M ++D  P
Sbjct: 1063 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 1122

Query: 481  DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            +   +NAL+ G C     + +L +   M   G   NE TY  L+ G+   ++ EL+  +L
Sbjct: 1123 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 1182

Query: 541  KELQLRQVV 549
            + +++  +V
Sbjct: 1183 ERMRVNDMV 1191



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 166/378 (43%), Gaps = 38/378 (10%)

Query: 82   AFLQLERMVSKGHKPDVVQATNLLYDLC-KANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
            AF   E M+ KG  PD V A N + D C +  +M KA      M   G+ P+ ++Y  L+
Sbjct: 1494 AFYFFEEMMKKGTCPDTV-AFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 1552

Query: 141  NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
            +   KK  +   + L   M   G   + +T++SL+ GL   G  +  ++ L ++I +G +
Sbjct: 1553 HGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTL 1612

Query: 201  PNAFTYSFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
             + FT++ L+   Y E G +  A  L++ +   G  P+  +YN +  GL K+    E+  
Sbjct: 1613 ADQFTFNILINK-YSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTV 1671

Query: 260  FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               ++   G  P    Y  L+  +C  G  + A +L  EM+        V  + ++  L 
Sbjct: 1672 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 1731

Query: 320  YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
            + GKT+ A+ VLD M++ R  P+ A++  ++ R C + K+   +K               
Sbjct: 1732 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK--------------- 1776

Query: 380  TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
               G+  LCG+     A                  Y  +I  +C  G +  AF+L  EM 
Sbjct: 1777 -LKGVMELCGLKLDVVA------------------YNVLIMGMCANGDSAAAFELYEEMR 1817

Query: 440  KYGFTPDSYTYSSLIRGL 457
                 P+  TY+ L+  +
Sbjct: 1818 HRDLCPNITTYAVLVDAI 1835



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 118/222 (53%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K+  AF  +  M + G  PD     ++   L K +  +++  V+  M+ +G+IP  + Y 
Sbjct: 1630 KMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYI 1689

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+N +C+ G++  A +L ++ME  G+ ++ V  +++VRGL   G    ++  LD +++ 
Sbjct: 1690 TLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRM 1749

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             L+P   T++ L+    ++  +  A+KL   +   G K ++V+YNVL+ G+C  G +  A
Sbjct: 1750 RLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAA 1809

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
               + ++  +   PN+ +Y +L+ ++       +  +LL ++
Sbjct: 1810 FELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 1851


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 212/467 (45%), Gaps = 16/467 (3%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           K+   +KA++    M   G  PD  +Y  +++ + +K     A+ +  +M    Y  N  
Sbjct: 143 KSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRA 202

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T+  L+ GLC  G  + +L+  D + QKG+ PN   Y+ +L    + +      +LL+ +
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
              G  P+ ++ N LL G CK G+ +EA    +    +G+   +  Y+ L+  L    R+
Sbjct: 263 KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           +E  E   +M      P +V Y ILI      G  D+AL +L++M +    P    YN +
Sbjct: 323 DEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I   C  G +D       ++    C P   TY  L   +C  G + EA  I   + N   
Sbjct: 383 IKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGC 442

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP--------------DSYTYSSLI 454
           S     +  +I  LC+ G+  +A  L Y+M + G  P              D+ +  +++
Sbjct: 443 SPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMV 501

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
             LC  GLI +A ++ + + +    PD+  +N L+ G CK++  + + ++F+ +  KG  
Sbjct: 502 ERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHS 561

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           P+  TY  L++G    D  E +  VL ++        SAV + +M +
Sbjct: 562 PDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTW 608



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 210/465 (45%), Gaps = 18/465 (3%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M   G KPDV    ++L+ + +      A+ V   M+     P+ +++  L+N LCK G
Sbjct: 156 KMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNG 215

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
               A+++ ++M   G P NT+ Y  ++ GLC     +   + L+ +   G  P++ T +
Sbjct: 216 KTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCN 275

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            LL+   K   +  A  LL     +G    +  Y+ L+ GL +  R +E   + R +   
Sbjct: 276 ALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKA 335

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
           G EP+VV Y IL+R  C  G  + A  +L +M     SP    YN LI      G  D A
Sbjct: 336 GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKA 395

Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
             +  E+ K    P++ +Y  +I  +C  G +D   +  +QM +  C P+  T+N L   
Sbjct: 396 RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455

Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY---------------VITSLCRKGKTYQA 431
           LC  G+++EA  +   +   +N  P  F +                ++  LC  G   +A
Sbjct: 456 LCKAGELEEARHLFYKMEIGKN--PSLFLRLSQGADRVMDTASLQTMVERLCESGLILKA 513

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
           ++LL ++   G  PD  TY+ LI G C    I  A ++F  ++   + PD   +  L+ G
Sbjct: 514 YKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDG 573

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
             +  R + +  V   M++ G  P+   Y  L+     + +L ++
Sbjct: 574 FHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVA 618



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 229/515 (44%), Gaps = 50/515 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K +DA    + M  KG  P+ +  T +L  LC+A +     +++  M  SG  PD+ 
Sbjct: 213 KNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSI 272

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +   L++  CK G +  A  L++  E  GY      Y+SL+ GL      ++  ++  ++
Sbjct: 273 TCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKM 332

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G+ P+   Y+ L+    +   V  A+ +L+D+  +G  P+   YN L+ G C  G  
Sbjct: 333 FKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLL 392

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A     ++      P   +Y IL+  +C  G  +EA ++  +M+    SP+I+T+N L
Sbjct: 393 DKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNAL 452

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPS--------------AASYNPIIARLCSEGKVD 360
           I  L   G+ + A  +  +M  G+  PS               AS   ++ RLC  G + 
Sbjct: 453 IDGLCKAGELEEARHLFYKMEIGK-NPSLFLRLSQGADRVMDTASLQTMVERLCESGLIL 511

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVI 419
              K L Q+      P+  TYN L    C    +  AF + + L  K +S     Y  +I
Sbjct: 512 KAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLI 571

Query: 420 TSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV-------- 471
               R  +   AF++L +M K G TP S  Y  L+   C +G +  A  +++        
Sbjct: 572 DGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPS 631

Query: 472 -------VMEEYDYKPDVDN-------------------FNALLLGLCKSRRTDLSLEVF 505
                  + EE+  K +++                    +   L+GLC++RR++ +L++F
Sbjct: 632 QEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIF 691

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
            ++ E     N  +  +L+ G+     LE++ ++ 
Sbjct: 692 LVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIF 726



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 107/487 (21%), Positives = 188/487 (38%), Gaps = 83/487 (17%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++AF  L+    +G+   +   ++L+  L +A +  +  +    M  +GI PD   YT
Sbjct: 286 QIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYT 345

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+   C+ G V YA+ ++  M   G   +T  YN+L++G C +G L+++      + + 
Sbjct: 346 ILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKN 405

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P + TY+ L+    +   +  A ++ + +   G  P+++++N L+ GLCK G  EEA
Sbjct: 406 DCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465

Query: 258 IRFF------------------------------------------------RDLPSKGF 269
              F                                                  L   G 
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV 525

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            P++++YN+L+   C       A +L  E+     SP  VTY  LI       + + A +
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV--------------------------- 362
           VLD+MVK    PS+A Y  ++   C +GK+ +                            
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFE 645

Query: 363 -------VKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
                  V+CL +M  +        Y   L  LC   + +EA  I   L   Q       
Sbjct: 646 KGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPS 705

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
              +I  LC+ G    A  +     + GF       + L+R L ++  ++ AL++   M 
Sbjct: 706 CVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMN 765

Query: 475 EYDYKPD 481
              Y  D
Sbjct: 766 SAGYDLD 772



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/385 (23%), Positives = 179/385 (46%), Gaps = 15/385 (3%)

Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           VT+N ++  L      +   + L+ L    +     T+S L+ A  K      A++    
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
           +   G KP++ +YN +L  + ++     A+  +  +    + PN  ++ ILL  LC  G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            ++A ++  EM      P  + Y I++  L    +TD   ++L+ M      P + + N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL----AMLCGVGKVQEAFAIIQSLG 404
           ++   C  G++D     L Q+F +     EG   G+    +++ G+ + +  +  +Q   
Sbjct: 277 LLDGFCKLGQIDEAFALL-QLFEK-----EGYVLGIKGYSSLIDGLFRAKR-YDEVQEWC 329

Query: 405 NKQNSSPQE----FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            K   +  E     Y  +I   C  G    A  +L +MT+ G +PD+Y Y++LI+G C  
Sbjct: 330 RKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDV 389

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           GL+++A  + + + + D  P    +  L+ G+C++   D + ++F  M   G  P+  T+
Sbjct: 390 GLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTF 449

Query: 521 TILVEGIAHQDELELSAEVLKELQL 545
             L++G+    ELE +  +  ++++
Sbjct: 450 NALIDGLCKAGELEEARHLFYKMEI 474



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 70/145 (48%)

Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
           +  VI  L +       +++L E+          T+S LI      G+ E+A+E F  M+
Sbjct: 99  HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158

Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
           ++  KPDV  +N++L  + +     L+L V+  M++    PN  T+ IL+ G+    + +
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 535 LSAEVLKELQLRQVVSESAVERLVM 559
            + ++  E+  + +   + +  +++
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIIL 243


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 190/409 (46%), Gaps = 35/409 (8%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           LQ+E M ++G  P VV    +++ L K  + + A      M + G++PD  +Y  L+N  
Sbjct: 330 LQME-MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRY 388

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK GN+  A+ L+  +   G     +TYN+L+ G C LG+L ++ +  + ++++G  P+ 
Sbjct: 389 CKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDV 448

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            TY+ L+  + K R +  A +  D++++KG +P+  +YN  +        T  A +    
Sbjct: 449 CTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREV 508

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  KG  P+ V+YN+++  LC  G  ++A  L  +M      P  +TY  LI +    G 
Sbjct: 509 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGL 568

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
              A K+L+ MV    +PS  +Y  ++   C  G +        +M     +PNE TYN 
Sbjct: 569 LREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNV 628

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L                                  I +LC  G+T  AF+  +EM + G 
Sbjct: 629 L----------------------------------IHALCMTGRTPLAFRHFHEMLERGL 654

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            P+ YTY+ LI G C EG   +A+ ++  M +    PD    NAL  G 
Sbjct: 655 APNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 182/387 (47%), Gaps = 35/387 (9%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A ++   M + G  PDV+   +LL   CKA  +K+A+ ++  +  +G+ P   +Y  L++
Sbjct: 362 AQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 421

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C+ G++  A +L E+M + G   +  TY  L+ G   + NL  + +F D ++ KGL P
Sbjct: 422 GYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQP 481

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           + F Y+  + A         A +L + ++ KG  P+ V+YNV++ GLCK G  ++A R  
Sbjct: 482 DCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLK 541

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             + S G +P+ ++Y  L+ + C  G   EA +LL  M      P++VTY IL+ +    
Sbjct: 542 TKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRR 601

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G    A     +M+     P+  +YN +I  LC  G+  L  +   +M  R   PN+ TY
Sbjct: 602 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTY 661

Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             L                                  I   CR+G    A +L +EM + 
Sbjct: 662 TLL----------------------------------IDGNCREGNWADAIRLYFEMHQN 687

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALE 468
           G  PD  T+++L +G   EG +  A+E
Sbjct: 688 GIPPDYCTHNALFKGF-DEGHMYHAIE 713



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 212/498 (42%), Gaps = 45/498 (9%)

Query: 71  DTRHRDHKLNDAF-LQLERMVS-KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG 128
           DTRH          L   R+V+  G  PDV     +L  L  A +      V   M+   
Sbjct: 173 DTRHATPAACSTLCLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLR 232

Query: 129 IIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQ 186
           + P   +Y  L++   K+G    A  L+++ME  G  +  N VT+N ++  L   G+L  
Sbjct: 233 VEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLEN 292

Query: 187 SLQFLD--RLIQK--------------------------------GLVPNAFTYSFLLEA 212
           +++ +D  RL +K                                G++P   TY+ ++  
Sbjct: 293 AVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHG 352

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
             K     AA     ++ A G  P++++YN LL   CK G  +EA+    DL   G  P 
Sbjct: 353 LLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPT 412

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           V++YN L+   C  G   EA  L  EM      P + TY IL+           A +  D
Sbjct: 413 VLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFD 472

Query: 333 EMVKGRFRPSAASYNPIIARLCSE---GKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLC 388
           EM+    +P   +YN    R+C+E       +  +  + M  +   P+  TYN +   LC
Sbjct: 473 EMLSKGLQPDCFAYN---TRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLC 529

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
             G +++A  +   + +         Y  +I + C +G   +A +LL  M   G  P   
Sbjct: 530 KTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVV 589

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY+ L+   C  G +  A   F  M +   +P+   +N L+  LC + RT L+   F  M
Sbjct: 590 TYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEM 649

Query: 509 IEKGQMPNETTYTILVEG 526
           +E+G  PN+ TYT+L++G
Sbjct: 650 LERGLAPNKYTYTLLIDG 667



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 189/429 (44%), Gaps = 18/429 (4%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTY--LVNCLCKKGNVGYAMQLVEKMEDYGYP 165
           L +   ++ A+K+++ M  S     ASS+TY  L+  L ++G V  A  L  +ME+ G  
Sbjct: 284 LAREGHLENAVKLVDSMRLS---KKASSFTYNPLITALLERGFVRKAEALQMEMENEGIM 340

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
              VTYN+++ GL        +      +   GL+P+  TY+ LL    K   +  A+ L
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL----- 280
           L D+   G  P +++YN L+ G C+ G   EA R   ++  +G  P+V +Y IL+     
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460

Query: 281 -RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
            R+L M      A E   EM      P    YN  I +      T  A ++ + M+    
Sbjct: 461 VRNLAM------AREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGI 514

Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML-CGVGKVQEAFA 398
            P   +YN II  LC  G +    +   +M     +P+  TY  L    C  G ++EA  
Sbjct: 515 YPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARK 574

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
           ++  + +         Y  ++ + CR+G  Y A+    +M   G  P+  TY+ LI  LC
Sbjct: 575 LLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALC 634

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
           M G    A   F  M E    P+   +  L+ G C+      ++ ++  M + G  P+  
Sbjct: 635 MTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYC 694

Query: 519 TYTILVEGI 527
           T+  L +G 
Sbjct: 695 THNALFKGF 703



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 4/286 (1%)

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           FR +   G  P+V   N +LR L    RW++   +  EM      PTIVTYN L+ S   
Sbjct: 190 FRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLK 249

Query: 321 HGKTDHALKVLDEMVK--GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
            G+ D A  +L EM    G F  +  ++N +I+ L  EG ++  VK +D M   + K + 
Sbjct: 250 EGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASS 308

Query: 379 GTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            TYN L   L   G V++A A+   + N+        Y  +I  L +  +   A     E
Sbjct: 309 FTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAE 368

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           M   G  PD  TY+SL+   C  G ++EAL +   +      P V  +N L+ G C+   
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
              +  + + M+E+G  P+  TYTIL+ G      L ++ E   E+
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEM 474



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 161/357 (45%), Gaps = 52/357 (14%)

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
           AA +L   +   G  P++   N +L  L    R ++    + ++     EP +V+YN LL
Sbjct: 188 AAFRL---VTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLL 244

Query: 281 RSLCMEGRWEEANELLAEMD--GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
            S   EGR +EA+ LL EM+  GG  S   VT+N++I  LA  G  ++A+K++D M   +
Sbjct: 245 DSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK 304

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEA-- 396
            + S+ +YNP+I  L   G V        +M +    P   TYN  A++ G+ K ++A  
Sbjct: 305 -KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYN--AIIHGLLKCEQAEA 361

Query: 397 ----FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
               FA ++++G   +      Y  ++   C+ G   +A  LL ++ + G  P   TY++
Sbjct: 362 AQVKFAEMRAMGLLPDVIT---YNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNT 418

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF------- 505
           LI G C  G + EA  +   M E    PDV  +  L+ G  K R   ++ E F       
Sbjct: 419 LIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKG 478

Query: 506 ----------------------------QMMIEKGQMPNETTYTILVEGIAHQDELE 534
                                       ++M+ KG  P+  TY ++++G+     L+
Sbjct: 479 LQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLK 535



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 4/207 (1%)

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI 399
           P     N ++  L    + D V     +M   R +P   TYN L       G+  EA  +
Sbjct: 200 PDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASML 259

Query: 400 IQSLGNKQN--SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           ++ +  +    S     +  VI+ L R+G    A +L+  M +      S+TY+ LI  L
Sbjct: 260 LKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITAL 318

Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
              G + +A  + + ME     P V  +NA++ GL K  + + +   F  M   G +P+ 
Sbjct: 319 LERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDV 378

Query: 518 TTYTILVEGIAHQDELELSAEVLKELQ 544
            TY  L+        L+ +  +L +L+
Sbjct: 379 ITYNSLLNRYCKAGNLKEALWLLGDLR 405


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 218/467 (46%), Gaps = 6/467 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM-EMMVSSGIIPDASSYTYL 139
           DAF  L    S+G  P +      L  L +A ++  A +V  EM  S  +  +  SYT +
Sbjct: 171 DAFRVLS---SRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAM 227

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +  LCK G V    +++ ++   G     VTYN L+  LC  G + ++ +   R+ Q G+
Sbjct: 228 IKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGM 287

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  T+  L+    +         +L ++   G  PN V YN L+   C++G   +A+R
Sbjct: 288 TPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALR 347

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F ++  K  +P  V+YN++ ++LC EG  E A  +L +M     +     +N ++  L 
Sbjct: 348 LFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL 407

Query: 320 YHGKT-DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
              +  +  + + +EMV    RP+       +  LC  GK    V    +  ++    N 
Sbjct: 408 QRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNL 467

Query: 379 GTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
            T N L   LC    ++EA  +IQ++ NK        Y  +I   C+  K  +A +L  +
Sbjct: 468 ATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGD 527

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           MT+ GF PD +T+++L+   C  G +EE   +   M+    +PD+ ++  ++ G CK++ 
Sbjct: 528 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKD 587

Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
              + E    ++++G  PN   Y  L+ G     ++  + + ++ ++
Sbjct: 588 IRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMK 634



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 198/439 (45%), Gaps = 38/439 (8%)

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ-KGLVPNAF 204
           +G++  A      +   G P +  T N+ +  L   G L+ + +  D + + + +  N +
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           +Y+ +++A  K   V A  ++L ++   G +P +V+YNVL+  LCK GR EEA R    +
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
              G  P+VV++ IL+  L    R+ E   +L EM+    SP  V YN LIG     G  
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 342

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEG--------------------------- 357
             AL++ DEMV  + +P+A +YN I   LC EG                           
Sbjct: 343 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 402

Query: 358 ---------KVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQ 407
                    +++ VV   ++M  R  +PN+      +  LC  GK QEA  I     NK 
Sbjct: 403 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 462

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                     +I  LC      +A +++  M   G   DS TY+ +IRG C +  +EEA+
Sbjct: 463 LGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI 522

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           ++   M    +KPD+  FN LL   C   + + +  +   M  +G  P+  +Y  +++G 
Sbjct: 523 KLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGH 582

Query: 528 AHQDELELSAEVLKELQLR 546
               ++  + E L EL  R
Sbjct: 583 CKAKDIRKAKEYLTELMDR 601



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 227/504 (45%), Gaps = 39/504 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++  F  L  +   G +P VV    L+  LCK+ ++++A ++   M   G+ P   ++ 
Sbjct: 236 KVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFG 295

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N L +    G    ++++ME  G   N V YN L+   C  G+ +Q+L+  D ++ K
Sbjct: 296 ILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLK 355

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI---------------------------- 229
            + P A TY+ + +A  KE  +  A ++L+D+                            
Sbjct: 356 KMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLES 415

Query: 230 --------IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
                   + +G +PN       +  LCK G+ +EA+  +    +KG   N+ + N L+ 
Sbjct: 416 VVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIH 475

Query: 282 SLCMEGRW-EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
            LC EG++ +EA +++  M         +TYNI+I       K + A+K+  +M +  F+
Sbjct: 476 GLC-EGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 534

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAI 399
           P   ++N ++   C+ GK++     LDQM     +P+  +Y  +    C    +++A   
Sbjct: 535 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEY 594

Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           +  L ++        Y  +I    R G    A   +  M   G  P + TY SL+  +C 
Sbjct: 595 LTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCH 654

Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
            GL+EEA  IF    E +    V  +  ++ G CK  +   ++  F+ M  +G  PN+ T
Sbjct: 655 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 714

Query: 520 YTILVEGIAHQDELELSAEVLKEL 543
           YT L+   +     E ++++  E+
Sbjct: 715 YTTLMYAYSKSGNSEEASKLFDEM 738



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 209/481 (43%), Gaps = 9/481 (1%)

Query: 49  QVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDL 108
           Q+ +SP + +Y   N   G +    H     + A    + MV K  KP  V    +   L
Sbjct: 319 QLGVSPNEVIY---NELIGWHCRKGH----CSQALRLFDEMVLKKMKPTAVTYNLIAKAL 371

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN-VGYAMQLVEKMEDYGYPTN 167
           CK  +M++A +++E M+S G+      +  +V  L ++   +   + +  +M   G   N
Sbjct: 372 CKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPN 431

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
                + +R LC  G   +++    + + KGL  N  T + L+    + + +  A K++ 
Sbjct: 432 DPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQ 491

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            ++ KG + + ++YN+++ G CK+ + EEAI+   D+  +GF+P++ ++N LL + C  G
Sbjct: 492 TMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLG 551

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           + EE   LL +M      P IV+Y  +I           A + L E++    +P+   YN
Sbjct: 552 KMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYN 611

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNK 406
            +I      G +   +  ++ M     +P   TY  L   +C  G V+EA  I       
Sbjct: 612 ALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN 671

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  +I   C+ GK  +A     EM   G +P+  TY++L+      G  EEA
Sbjct: 672 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEA 731

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            ++F  M      PD   +  L+    +    D  +     +       ++  Y IL  G
Sbjct: 732 SKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNG 791

Query: 527 I 527
           I
Sbjct: 792 I 792



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 2/191 (1%)

Query: 372 RRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTY 429
           R   P+  T N  L  L   G++  A  +   +   +N +  E+ Y  +I +LC+ GK  
Sbjct: 179 RGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVD 238

Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
             F++L E+ + G  P   TY+ L+  LC  G +EEA  +   ME+    P V  F  L+
Sbjct: 239 AGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILI 298

Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
            GL +  R      V Q M + G  PNE  Y  L+     +     +  +  E+ L+++ 
Sbjct: 299 NGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMK 358

Query: 550 SESAVERLVMQ 560
             +    L+ +
Sbjct: 359 PTAVTYNLIAK 369


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 217/462 (46%), Gaps = 2/462 (0%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L+ + +++ G K DVV AT L++  C   ++ KA+ + + +VS G+ P   +Y  L+   
Sbjct: 277 LKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGC 336

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
             +G      +L  +M + G   +T  +N +++GL        ++  L  ++  G VP+ 
Sbjct: 337 DAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG-VPDV 395

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
           FTY  L+    K + +H A+ L D +   G KP++V+Y+ LL G C++GR +EA++ + +
Sbjct: 396 FTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSE 455

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +P KGF PN V+Y  L++    +  ++ A  LL EM     S    TYNILI  L    +
Sbjct: 456 MPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNR 515

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
                ++L   +   F P+  +YN II      G +        QM  +   PN  TY  
Sbjct: 516 VCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTS 575

Query: 384 -LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            +   C       A  ++  +           Y   I + C++G   +A   L  + K G
Sbjct: 576 FIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDG 635

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
            TPD   Y+S + G     ++ EA + +  M +     D + +  L+ G  K      +L
Sbjct: 636 LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFAL 695

Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           E++  M+    +P++ T+T L  G+    +++ +  +L +++
Sbjct: 696 ELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMR 737



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 203/438 (46%), Gaps = 2/438 (0%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
            +M+ +G  P   +   ++  L +  + K AI +++++V +G+ PD  +Y  L++ LCK 
Sbjct: 350 RQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKH 408

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
             +  A+ L +KM++ G   + VTY+SL+ G C  G ++++L+    +  KG  PN  TY
Sbjct: 409 QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTY 468

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + L++   K++    A  LL+++   G      +YN+L+ GL    R  E     +   S
Sbjct: 469 TTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLS 528

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           +GF P  ++YN ++      G    A  +  +M     +P IVTY   I         D 
Sbjct: 529 EGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL 588

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+K+L  + +   +P  A+YN  I   C +G +   +  L  +      P+   YN    
Sbjct: 589 AVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVT 648

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
               +  + EA     S+  ++  +  E Y  +I    + G    A +L  EM      P
Sbjct: 649 GYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIP 708

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  T+++L  GLC  G I+ A  +   M   D  P++  +N L+    +  +   + ++ 
Sbjct: 709 DDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLH 768

Query: 506 QMMIEKGQMPNETTYTIL 523
             M+  G +P++TTY IL
Sbjct: 769 DEMLSSGVVPDDTTYDIL 786



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/512 (23%), Positives = 231/512 (45%), Gaps = 40/512 (7%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA    + M  KG   D      ++    +      A+++ + M  +G+ PD   Y   +
Sbjct: 168 DALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITI 227

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR-LIQKGL 199
           + LCK  +   A+Q++ KM + G+    +TY+S+V  L  +  ++++L+  D+ L+  G 
Sbjct: 228 SGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGK 287

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
             +    + L+        V  A+ L D++++ G  P  V+Y VL+ G   EG T+E  +
Sbjct: 288 KMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYK 347

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA-EMDGGDRSPTIVTYNILIGSL 318
             R +  +G  P+   +N++++ L  + RW++A  LL   +D G   P + TY  LI  L
Sbjct: 348 LCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG--VPDVFTYGCLIHWL 405

Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
             H K   A+ + D+M +   +PS  +Y+ ++   C +G++D  +K   +M  +   PNE
Sbjct: 406 CKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNE 465

Query: 379 GTY--------------NGLAML---------CG-------------VGKVQEAFAIIQS 402
            TY              N  A+L         CG             V +V E   +++ 
Sbjct: 466 VTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKR 525

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
             ++        Y  +I    + G    AF +  +M K G TP+  TY+S I G C    
Sbjct: 526 FLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNC 585

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
            + A+++ + +     +PD+  +NA +   CK      +L    ++++ G  P+ T Y  
Sbjct: 586 CDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNS 645

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            V G  +   +  +++    +  ++VV+++ +
Sbjct: 646 FVTGYKNLKMMAEASKFYYSMIKQRVVADTEI 677



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 175/417 (41%), Gaps = 37/417 (8%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +  DA   L+ +V  G  PDV     L++ LCK  K+ +A+ + + M  +G+ P   
Sbjct: 373 RDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIV 431

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+   C+KG +  A++L  +M D G+P N VTY +L++G       + +   L+ +
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            Q G+    +TY+ L+   Y    V    ++L   +++G  P  ++YN ++ G  K G  
Sbjct: 492 RQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMM 551

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A   +R +  KG  PN+V+Y   +   C     + A +LL  +      P I  YN  
Sbjct: 552 GSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAF 611

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIA---------------------RL 353
           I +    G    AL  L  ++K    P    YN  +                      R+
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRV 671

Query: 354 CSE--------------GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
            ++              G V   ++   +M      P++ T+  L   LC  G +  A  
Sbjct: 672 VADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKR 731

Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           ++  +     S     Y  +I +  R GK  +AFQL  EM   G  PD  TY  L R
Sbjct: 732 LLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPR 788



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 170/359 (47%), Gaps = 13/359 (3%)

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R++ +G+VP+A + + LL           A+ L D++  KG   +   Y+V++    + G
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
              +A+R F ++   G +P+   Y I +  LC     + A ++L +M      P  +TY+
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL-----CSEGKVDLVVKCLD 367
            ++  L    + D AL++ D+M+      +    + ++A +     C  G+V   +   D
Sbjct: 260 SVVDVLVKVRRMDEALRLKDQMLLA----TGKKMDVVLATMLMHGYCLNGEVGKALDLFD 315

Query: 368 QMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRK 425
           ++      P   TY  L   C   G   E + + + +  +Q   P  + +  VI  L R 
Sbjct: 316 EVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQM-IEQGLLPSTYEFNLVIKGLLRD 374

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
            +   A  LL  +   G  PD +TY  LI  LC    + EA+ ++  M+E   KP +  +
Sbjct: 375 KRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTY 433

Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           ++LLLG C+  R D +L+++  M +KG  PNE TYT L++G   +   + +  +L E++
Sbjct: 434 HSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMR 492



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 35/239 (14%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           +  AF    +M  KG  P++V  T+ +   C+ N    A+K++  +   GI PD ++Y  
Sbjct: 551 MGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNA 610

Query: 139 LVNCLCKKGNVGYAMQ-LVEKMEDYGYPTNTV---------------------------- 169
            ++  CK+GN+  A+  LV  ++D   P  TV                            
Sbjct: 611 FIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQR 670

Query: 170 ------TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
                  Y +L+ G   +GN+  +L+    ++   ++P+  T++ L     +   +  A 
Sbjct: 671 VVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAK 730

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
           +LLDD+      PN+V+YN+L+    ++G+ +EA +   ++ S G  P+  +Y+IL R+
Sbjct: 731 RLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRT 789



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 16/236 (6%)

Query: 22  AYGFYSQI------PNLHSF-SLNKGFIRV----LASTQVTISPKDSVYTKPNRKPGNNN 70
           A+G Y Q+      PN+ ++ S   G+ R     LA   +    +D +  +P+    N  
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGI--QPDIAAYNAF 611

Query: 71  -DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGI 129
            DT  +   ++ A   L  ++  G  PDV    + +        M +A K    M+   +
Sbjct: 612 IDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRV 671

Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL 188
           + D   YT L++   K GNV +A++L  E M ++  P +  T+ +L  GLC  G+++ + 
Sbjct: 672 VADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDK-TFTALTHGLCRSGDIDGAK 730

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
           + LD + +  + PN  TY+ L+ A  ++  +  A +L D++++ G  P+  +Y++L
Sbjct: 731 RLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 215/492 (43%), Gaps = 36/492 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +    +     M  KG  P+V     L+  LC    +KKA  +++ M  +G +P   
Sbjct: 210 KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 269

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+N  CKKG    A++L++ M   G   +  TYN  +  LC      ++   L ++
Sbjct: 270 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 329

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++ + PN  TY+ L+    KE  +  A ++ +++      PN V+YN L+ G C  G  
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           EEA+R    + + G   N V+Y  LL  LC   ++E A  LL  M   D     + Y +L
Sbjct: 390 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVL 449

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L  +G  D A++++  M K    P   +Y+ +I   C  G +    + + +M+    
Sbjct: 450 IDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 509

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             N+  Y+ L    C  G V EA  +   +    + +       +++SLCR GK  +A +
Sbjct: 510 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 569

Query: 434 LLYEMTKYGFTPDS-----------------------------------YTYSSLIRGLC 458
            L  M++ G  P+S                                   +TY SL++GLC
Sbjct: 570 FLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLC 629

Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
             G + EA +    +       D   +N LL   CKS     ++ +F  M++   +P+  
Sbjct: 630 KGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 689

Query: 519 TYTILVEGIAHQ 530
           TY+ L+ G+  +
Sbjct: 690 TYSSLLTGLCRK 701



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 197/419 (47%), Gaps = 17/419 (4%)

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           A++  E++   G  P   +   ++  + K         L  +M D G   N  T+N L+ 
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 241

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
           GLC+ GNL ++   L ++ + G VP   TY+ LL    K+    AA++L+D +I KG + 
Sbjct: 242 GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEA 301

Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           ++ +YNV +  LC   R+ +A    + +  +   PN V+YN L+     EG+   A ++ 
Sbjct: 302 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 361

Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
            EM   D SP  VTYN LIG   + G  + AL++LD M     R +  +Y  ++  LC  
Sbjct: 362 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 421

Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAM------LCGVGKVQEAFAIIQSLGN--KQN 408
            K +L  + L++M     + N+     +A       LC  G + EA   +Q +GN  K  
Sbjct: 422 EKFELAKRLLERM-----RVNDMVVGHIAYTVLIDGLCKNGMLDEA---VQLVGNMYKDG 473

Query: 409 SSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
            +P    Y  +I   CR G    A +++  M + G   +   YS+LI   C  G + EA+
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 533

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           +++ VM    +  D    N L+  LC+  +   + +    M   G +PN  TY  ++ G
Sbjct: 534 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 592



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 221/476 (46%), Gaps = 8/476 (1%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           +A   L+ M + G + + V    LL  LCK  K + A +++E M  + ++    +YT L+
Sbjct: 391 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 450

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           + LCK G +  A+QLV  M   G   + +TY+SL+ G C +GN+  + + + R+ + GLV
Sbjct: 451 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            N   YS L+    +   V  AMK+   +   G   +  + NVL++ LC++G+  EA +F
Sbjct: 511 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G  PN ++Y+ ++      G    A     +M    + P+  TY  L+  L  
Sbjct: 571 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 630

Query: 321 HGKTDHALKVLDEMVKGRFRPSAAS---YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
            G    A K L+ +    + P A     YN ++A  C  G +   V   D+M      P+
Sbjct: 631 GGNLVEAKKFLNRL---HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 687

Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLL 435
             TY+ L   LC  GK   A  +  +   +    P    Y  ++  L + G    AF   
Sbjct: 688 SYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFF 747

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM K G  PD+  ++++I      G + +A + F  M  +   P++  +N LL G  K 
Sbjct: 748 EEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKK 807

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           +     L ++  M+ +G  P++ T+  L+ G++     +L  ++L ++ +   +++
Sbjct: 808 QALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 863



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 204/453 (45%), Gaps = 1/453 (0%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G KP V     +L  + K  + +    +   M   GI P+  ++  L+N LC +GN+  A
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
             L+++ME+ G+    VTYN+L+   C  G    +++ +D +I KG+  +  TY+  ++ 
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 312

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
                    A  LL  +  +   PN V+YN L+ G  KEG+   A + F ++      PN
Sbjct: 313 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN 372

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            V+YN L+   C  G +EEA  LL  M+        VTY  L+  L  H K + A ++L+
Sbjct: 373 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLE 432

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
            M          +Y  +I  LC  G +D  V+ +  M+     P+  TY+ L    C VG
Sbjct: 433 RMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVG 492

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            ++ A  II  +        +  Y  +I + C+ G   +A ++   M   G   D +T +
Sbjct: 493 NIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCN 552

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
            L+  LC +G + EA +    M      P+   ++ ++ G         +   F  MI+ 
Sbjct: 553 VLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKC 612

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           GQ P+  TY  L++G+     L  + + L  L 
Sbjct: 613 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLH 645



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 204/441 (46%), Gaps = 4/441 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P+ V    L+   C     ++A+++++ M ++G+  +  +Y  L+N LCK      A +L
Sbjct: 371 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 430

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           +E+M         + Y  L+ GLC  G L++++Q +  + + G+ P+  TYS L+    +
Sbjct: 431 LERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCR 490

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              + +A +++  +   G   N + Y+ L+   C+ G   EA++ +  +   G   +  +
Sbjct: 491 VGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFT 550

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
            N+L+ SLC +G+  EA + L  M      P  +TY+ +I      G   +A    D+M+
Sbjct: 551 CNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMI 610

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
           K    PS  +Y  ++  LC  G +    K L+++ +     +   YN  LA  C  G + 
Sbjct: 611 KCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLH 670

Query: 395 EAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL-YEMTKYGFTPDSYTYSS 452
           EA A+   +  + N  P  + Y  ++T LCRKGK   A  L    M +    P+   Y+ 
Sbjct: 671 EAVALFDKM-VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 729

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+ GL   G  + A   F  M +    PD   FNA++    +  +   + + F  M   G
Sbjct: 730 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 789

Query: 513 QMPNETTYTILVEGIAHQDEL 533
             PN  TY IL+ G + +  L
Sbjct: 790 VCPNLATYNILLHGFSKKQAL 810



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 213/460 (46%), Gaps = 10/460 (2%)

Query: 97   DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
            D V    LL + CK+  + +A+ + + MV + ++PD+ +Y+ L+  LC+KG    A+ L 
Sbjct: 652  DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 711

Query: 157  EKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAY 214
                  G  +P N V Y  LV GL   G+   +  F + +++KG  P+   ++ ++++  
Sbjct: 712  GTAMGRGTLFP-NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCS 770

Query: 215  KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
            +   +  A      +   G  PNL +YN+LL G  K+      +  +  +  +G  P+ +
Sbjct: 771  RRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKL 830

Query: 275  SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
            +++ L+  L   G  +   +LL +M          T+NILI   +  GK   A  +++ M
Sbjct: 831  TFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFM 890

Query: 335  VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGV 390
                  P   +YN I   L  +         L +M      P    Y    NG+   C V
Sbjct: 891  NTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGM---CRV 947

Query: 391  GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
            G +Q AF +   +      S +     ++  L   GKT  A  +L  M +    P   T+
Sbjct: 948  GDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATF 1007

Query: 451  SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            ++L+   C +  I EAL++  VME    K DV  +N L++G+C +  +  + E+++ M  
Sbjct: 1008 TTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRH 1067

Query: 511  KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
            +   PN TTY +LV+ I+  + L    ++L +LQ R ++S
Sbjct: 1068 RDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLIS 1107



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 219/530 (41%), Gaps = 47/530 (8%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++  L++A   +  M   G  PDV+  ++L+   C+   +K A +++  M  SG++
Sbjct: 451 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +   Y+ L+   C+ GNV  AM++   M   G+  +  T N LV  LC  G L ++ +F
Sbjct: 511 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  + + GLVPN+ TY  ++           A    DD+I  G  P+  +Y  LL GLCK
Sbjct: 571 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 630

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G   EA +F   L       + V YN LL   C  G   EA  L  +M   +  P   T
Sbjct: 631 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 690

Query: 311 YNILIGSLAYHGKTDHALKVL-DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           Y+ L+  L   GK   A+ +    M +G   P+   Y  ++  L   G         ++M
Sbjct: 691 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 750

Query: 370 FHRRCKPNEGTYNGLAMLCG----VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
             +   P+   +N +   C     + K  + F+ ++  G   N +    Y  ++    +K
Sbjct: 751 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLAT---YNILLHGFSKK 807

Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL----------------CMEGLIEEALEI 469
               +   L   M + G  PD  T+ SLI GL                 MEG + +    
Sbjct: 808 QALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTF 867

Query: 470 FVVMEEYDYK-------------------PDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
            +++ +Y                      PD D +N +  GL K      S  V   M+E
Sbjct: 868 NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 927

Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQL----RQVVSESAVER 556
            G +P    Y  L+ G+    +++ + ++  E++        V+ESA+ R
Sbjct: 928 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVR 977



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 172/356 (48%), Gaps = 1/356 (0%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
            ++ L+R     G ++ +++  + +   G  P+ +T + +L +  K++       L  ++
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
             KG  PN+ ++N+L+ GLC EG  ++A    + +   GF P +V+YN LL   C +GR+
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           + A EL+  M        + TYN+ I +L  + ++  A  +L +M K    P+  +YN +
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQN 408
           I     EGK+ +  +  ++M      PN  TYN L    C VG  +EA  ++  +     
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
              +  Y  ++  LC+  K   A +LL  M           Y+ LI GLC  G+++EA++
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +   M +    PDV  +++L+ G C+      + E+   M   G + N+  Y+ L+
Sbjct: 465 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLI 520



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 34/309 (11%)

Query: 241 YNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMD 300
           +++L+    KEG  + A+  F  +   GF+P+V + N++L S+  + R E    L  EM 
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
                P + T+NILI  L   G    A  +L +M +  F P+  +YN ++   C +G+  
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 361 LVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
             ++ +D M  +  + +  TYN                                    I 
Sbjct: 286 AAIELIDYMICKGIEADVCTYN----------------------------------VFID 311

Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +LC   ++ +A+ LL +M K   +P+  TY++LI G   EG I  A ++F  M ++D  P
Sbjct: 312 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 371

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           +   +NAL+ G C     + +L +   M   G   NE TY  L+ G+   ++ EL+  +L
Sbjct: 372 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 431

Query: 541 KELQLRQVV 549
           + +++  +V
Sbjct: 432 ERMRVNDMV 440



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 166/378 (43%), Gaps = 38/378 (10%)

Query: 82   AFLQLERMVSKGHKPDVVQATNLLYDLC-KANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
            AF   E M+ KG  PD V A N + D C +  +M KA      M   G+ P+ ++Y  L+
Sbjct: 743  AFYFFEEMMKKGTCPDTV-AFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILL 801

Query: 141  NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
            +   KK  +   + L   M   G   + +T++SL+ GL   G  +  ++ L ++I +G +
Sbjct: 802  HGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTL 861

Query: 201  PNAFTYSFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
             + FT++ L+   Y E G +  A  L++ +   G  P+  +YN +  GL K+    E+  
Sbjct: 862  ADQFTFNILINK-YSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTV 920

Query: 260  FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
               ++   G  P    Y  L+  +C  G  + A +L  EM+        V  + ++  L 
Sbjct: 921  VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 980

Query: 320  YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
            + GKT+ A+ VLD M++ R  P+ A++  ++ R C + K+   +K               
Sbjct: 981  HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK--------------- 1025

Query: 380  TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
               G+  LCG+     A                  Y  +I  +C  G +  AF+L  EM 
Sbjct: 1026 -LKGVMELCGLKLDVVA------------------YNVLIMGMCANGDSAAAFELYEEMR 1066

Query: 440  KYGFTPDSYTYSSLIRGL 457
                 P+  TY+ L+  +
Sbjct: 1067 HRDLCPNITTYAVLVDAI 1084



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 118/222 (53%)

Query: 78   KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
            K+  AF  +  M + G  PD     ++   L K +  +++  V+  M+ +G+IP  + Y 
Sbjct: 879  KMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYI 938

Query: 138  YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
             L+N +C+ G++  A +L ++ME  G+ ++ V  +++VRGL   G    ++  LD +++ 
Sbjct: 939  TLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRM 998

Query: 198  GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
             L+P   T++ L+    ++  +  A+KL   +   G K ++V+YNVL+ G+C  G +  A
Sbjct: 999  RLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAA 1058

Query: 258  IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
               + ++  +   PN+ +Y +L+ ++       +  +LL ++
Sbjct: 1059 FELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 1100


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 228/508 (44%), Gaps = 28/508 (5%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           MV  G  P       L+  LC ++ +  A ++ + M   G  P+  ++  LV   CK G 
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
               ++L+  ME +G   N V YN++V   C  G  + S + ++++ ++GLVP+  T++ 
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKG----GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
            + A  KE  V  A ++  D+         +PN ++YN++L G CK G  E+A   F  +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
                  ++ SYNI L+ L   G++ EA  +L +M      P+I +YNIL+  L   G  
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
             A  ++  M +    P A +Y  ++   CS GKVD     L +M    C PN  T N L
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              L  +G++ EA  +++ +  K           ++  LC  G+  +A +++  M  +G 
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497

Query: 444 T-----------------------PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
                                   PD  TYS+L+ GLC  G   EA  +F  M     +P
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D   +N  +   CK  +   +  V + M +KG   +  TY  L+ G+  ++++     ++
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617

Query: 541 KELQLRQVVSESAVERLVMQYDFEGIEV 568
            E++ + +          +QY  EG +V
Sbjct: 618 DEMKEKGISPNICTYNTAIQYLCEGEKV 645



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 226/492 (45%), Gaps = 29/492 (5%)

Query: 79  LNDAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           L D  L+L   M S G  P+ V    ++   C+  +   + K++E M   G++PD  ++ 
Sbjct: 197 LTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN 256

Query: 138 YLVNCLCKKGNVGYAMQLVEKME--DY-GYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDR 193
             ++ LCK+G V  A ++   ME  +Y G P  N++TYN +++G C +G L  +    + 
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES 316

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +   + +  +Y+  L+   +      A  +L  +  KG  P++ SYN+L+ GLCK G 
Sbjct: 317 IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGM 376

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             +A      +   G  P+ V+Y  LL   C  G+ + A  LL EM   +  P   T NI
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL------- 366
           L+ SL   G+   A ++L +M +  +     + N I+  LC  G++D  ++ +       
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496

Query: 367 ----------------DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
                           D +    C P+  TY+ L   LC  G+  EA  +   +  ++  
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556

Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
                Y   I   C++GK   AF++L +M K G      TY+SLI GL ++  I E   +
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
              M+E    P++  +N  +  LC+  + + +  +   M++K   PN  ++  L+E    
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676

Query: 530 QDELELSAEVLK 541
             + +++ EV +
Sbjct: 677 VPDFDMAQEVFE 688



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 170/348 (48%), Gaps = 5/348 (1%)

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ + Y+ LLE+  KER V     L  D++  G  P   ++N+L+  LC     + A   
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F ++P KG +PN  ++ IL+R  C  G  ++  ELL  M+     P  V YN ++ S   
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM----FHRRCKP 376
            G+ D + K++++M +    P   ++N  I+ LC EGKV    +    M    +    +P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 377 NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TYN  L   C VG +++A  + +S+    + +  + Y   +  L R GK  +A  +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            +MT  G  P  Y+Y+ L+ GLC  G++ +A  I  +M+     PD   +  LL G C  
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
            + D +  + Q M+    +PN  T  IL+  +     +  + E+L+++
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM 457



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 236/510 (46%), Gaps = 37/510 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKV---MEMMVSSGII- 130
           R+ + +D+   +E+M  +G  PD+V   + +  LCK  K+  A ++   ME+    G+  
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P++ +Y  ++   CK G +  A  L E + +     +  +YN  ++GL   G   ++   
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L ++  KG+ P+ ++Y+ L++   K   +  A  ++  +   G  P+ V+Y  LL G C 
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            G+ + A    +++      PN  + NILL SL   GR  EA ELL +M+        VT
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 311 YNILIGSLAYHGKTDHALKVL-----------------------DEMVKGRFRPSAASYN 347
            NI++  L   G+ D A++++                       D +++    P   +Y+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNK 406
            ++  LC  G+         +M   + +P+   YN  +   C  GK+  AF +++ +  K
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                 E Y  +I  L  K + ++   L+ EM + G +P+  TY++ I+ LC    +E+A
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK-GQMPNETTYTILVE 525
             +   M + +  P+V +F  L+   CK    D++ EVF+  +   GQ   E  Y+++  
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQ--KEGLYSLMF- 705

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVE 555
                +EL  + ++LK  +L + V +   E
Sbjct: 706 -----NELLAAGQLLKATELLEAVLDRGFE 730



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 210/456 (46%), Gaps = 28/456 (6%)

Query: 99  VQATNL-LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVE 157
           +Q+ N+ L  L +  K  +A  V++ M   GI P   SY  L++ LCK G +  A  +V 
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385

Query: 158 KMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKER 217
            M+  G   + VTY  L+ G C +G ++ +   L  +++   +PNA+T + LL + +K  
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445

Query: 218 GVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE------- 270
            +  A +LL  +  KG   + V+ N+++ GLC  G  ++AI   + +   G         
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505

Query: 271 ----------------PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
                           P++++Y+ LL  LC  GR+ EA  L AEM G    P  V YNI 
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      GK   A +VL +M K     S  +YN +I  L  + ++  +   +D+M  +  
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625

Query: 375 KPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAF 432
            PN  TYN  +  LC   KV++A  ++  +  K N +P  F +KY+I + C K   +   
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK-NIAPNVFSFKYLIEAFC-KVPDFDMA 683

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
           Q ++E            YS +   L   G + +A E+   + +  ++     +  L+  L
Sbjct: 684 QEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESL 743

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           CK    +++  +   MI++G   +      +++G+ 
Sbjct: 744 CKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLG 779



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 224/503 (44%), Gaps = 71/503 (14%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL----CKKGNVGYAMQLVEKMEDYGYP 165
           K+N + KA    +++ S    P+     YL N L     K+  V +   L + M   G  
Sbjct: 87  KSNHIDKAFPQFQLVRSR--FPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIA 144

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL----EAAYKERGVHA 221
             T T+N L+R LC    ++ + +  D + +KG  PN FT+  L+    +A   ++G+  
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204

Query: 222 --AM-----------------------------KLLDDIIAKGGKPNLVSYNVLLTGLCK 250
             AM                             K+++ +  +G  P++V++N  ++ LCK
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264

Query: 251 EGRTEEAIRFFRDLPSKGF----EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           EG+  +A R F D+    +     PN ++YN++L+  C  G  E+A  L   +   D   
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
           ++ +YNI +  L  HGK   A  VL +M      PS  SYN ++  LC  G +      +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384

Query: 367 DQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY-KYVITSLCR 424
             M      P+  TY  L    C VGKV  A +++Q +  + N  P  +    ++ SL +
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNCLPNAYTCNILLHSLWK 443

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME---------- 474
            G+  +A +LL +M + G+  D+ T + ++ GLC  G +++A+EI   M           
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503

Query: 475 -------------EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
                        E +  PD+  ++ LL GLCK+ R   +  +F  M+ +   P+   Y 
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563

Query: 522 ILVEGIAHQDELELSAEVLKELQ 544
           I +     Q ++  +  VLK+++
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDME 586



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 198/421 (47%), Gaps = 22/421 (5%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DA   +  M   G  PD V    LL+  C   K+  A  +++ M+ +  +P+A +   
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ L K G +  A +L+ KM + GY  +TVT N +V GLC  G L+++++     I KG
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE-----IVKG 491

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDD-IIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           +  +         AA    G ++ + L+DD +I     P+L++Y+ LL GLCK GR  EA
Sbjct: 492 MRVHG-------SAALGNLG-NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F ++  +  +P+ V+YNI +   C +G+   A  +L +M+      ++ TYN LI  
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L    +      ++DEM +    P+  +YN  I  LC   KV+     LD+M  +   PN
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663

Query: 378 EGTYNGL-AMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
             ++  L    C V      QE F    S+  ++    +  Y  +   L   G+  +A +
Sbjct: 664 VFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK----EGLYSLMFNELLAAGQLLKATE 719

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL  +   GF   ++ Y  L+  LC +  +E A  I   M +  Y  D      ++ GL 
Sbjct: 720 LLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLG 779

Query: 494 K 494
           K
Sbjct: 780 K 780



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/413 (21%), Positives = 173/413 (41%), Gaps = 60/413 (14%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K++ A   L+ M+     P+      LL+ L K  ++ +A +++  M   G   D  +  
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN 470

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPT-----------------------NTVTYNSL 174
            +V+ LC  G +  A+++V+ M  +G                          + +TY++L
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           + GLC  G   ++      ++ + L P++  Y+  +    K+  + +A ++L D+  KG 
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
             +L +YN L+ GL  + +  E      ++  KG  PN+ +YN  ++ LC   + E+A  
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
           LL EM   + +P + ++  LI +       D A +V +  V                   
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS------------------ 692

Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
                              C   EG Y+ +   L   G++ +A  +++++ ++       
Sbjct: 693 ------------------ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734

Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
            YK ++ SLC+K +   A  +L++M   G+  D      +I GL   G  +EA
Sbjct: 735 LYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 69/273 (25%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD++  + LL  LCKA +  +A  +   M+   + PD+ +Y   ++  CK+G +  A ++
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNL----------------------NQSLQFL-- 191
           ++ ME  G   +  TYNSL+ GL +   +                      N ++Q+L  
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641

Query: 192 -----------DRLIQKGLVPNAFTYSFLLEAAYK--------------------ERGVH 220
                      D ++QK + PN F++ +L+EA  K                    + G++
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701

Query: 221 AAM--------------KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + M              +LL+ ++ +G +     Y  L+  LCK+   E A      +  
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
           +G+  +  +   ++  L   G  +EAN    +M
Sbjct: 762 RGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 47/93 (50%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +  +L  A ++ KA +++E ++  G       Y  LV  LCKK  +  A  ++ KM D G
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           Y  +      ++ GL  +GN  ++  F D++++
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 218/441 (49%), Gaps = 3/441 (0%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           +A +++ A+KV+ +M  +G+ P+       ++   +   +  A++ +E+M+  G   N V
Sbjct: 257 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 316

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           TYN ++RG C L  + ++++ LD +  KG +P+  +Y  ++    KE+ +     L+  +
Sbjct: 317 TYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 376

Query: 230 IAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
             + G   + V+YN L+  L K    +EA+ F +D   KGF  + V Y+ ++ +LC EGR
Sbjct: 377 AKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGR 436

Query: 289 WEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
             EA +L+ EM   G   P +VTY  ++      G+ D A K+L  M    ++P+  SY 
Sbjct: 437 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYT 496

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            ++  LC  GK     + ++    +   PN  TY+ L   L   GK+ EA  +++ +  K
Sbjct: 497 ALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLK 556

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                      ++ SLCR G+T++A + + E    G   +   ++++I G C    ++ A
Sbjct: 557 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 616

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L +   M   +   DV  +  L+  L K  R   + E+ + M+ KG  P   TY  ++  
Sbjct: 617 LSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 676

Query: 527 IAHQDELELSAEVLKELQLRQ 547
               ++++    +L+++ LRQ
Sbjct: 677 YCQMEKVDDLVAILEKMILRQ 697



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 201/393 (51%), Gaps = 8/393 (2%)

Query: 72  TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-II 130
           T+H DH  ++A   L+    KG + D V  + +++ LCK  +M +A  ++  M+S G   
Sbjct: 397 TKH-DHA-DEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 454

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +YT +VN  C+ G V  A +L++ M  +GY  NTV+Y +L+ GLC  G   ++ + 
Sbjct: 455 PDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREM 514

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           ++   ++   PN+ TYS L+    KE  +  A  ++ +++ KG  P  V  N+LL  LC+
Sbjct: 515 MNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 574

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
           +GRT EA +F  +  +KG   NVV++  ++   C     + A  +L +M   ++   + T
Sbjct: 575 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 634

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  L+ +L   G+   A +++ +M+     P+  +Y  +I R C   KVD +V  L++M 
Sbjct: 635 YTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMI 694

Query: 371 HR-RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
            R +CK     YN  +  LCG+GK++EA  ++  +    + S  +    ++    + G  
Sbjct: 695 LRQKCKT---IYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVP 751

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
             A+++   M      PD      L + L +EG
Sbjct: 752 LLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEG 784



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 252/548 (45%), Gaps = 51/548 (9%)

Query: 39  KGFIRVLASTQVTISPKDSVYT---------KPNRKPGNNN-DTRHRDHKLNDAFLQLER 88
           + F+RV+ S       +D++           +PN    N   D   R ++L  A   LER
Sbjct: 246 EAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLER 305

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M   G  P+VV    ++   C  +++++AI++++ M S G +PD  SY  ++  LCK+  
Sbjct: 306 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKR 365

Query: 149 VGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
           +     L++KM +++G   + VTYN+L+  L    + +++L FL    +KG   +   YS
Sbjct: 366 IVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYS 425

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
            ++ A  KE  +  A  L++++++KG   P++V+Y  ++ G C+ G  ++A +  + + +
Sbjct: 426 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHT 485

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G++PN VSY  LL  LC  G+  EA E++   +    SP  +TY++L+  L   GK   
Sbjct: 486 HGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSE 545

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A  V+ EMV   F P     N ++  LC +G+     K +++  ++ C  N   +  +  
Sbjct: 546 ACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIH 605

Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C   ++  A +++  +      +    Y  ++ +L +KG+  +A +L+ +M   G  P
Sbjct: 606 GFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDP 665

Query: 446 DSYTYSSLIR---------------------------------GLCMEGLIEEALEIFVV 472
              TY ++I                                   LC  G +EEA ++   
Sbjct: 666 TPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGK 725

Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN-----ETTYTILVEGI 527
           +     + D     AL+ G  K     L+ +V   M  +  +P+     + +  ++VEG 
Sbjct: 726 VLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGA 785

Query: 528 AHQDELEL 535
            + + + L
Sbjct: 786 GNDNNMLL 793



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 167/348 (47%), Gaps = 3/348 (0%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +   Y  +LE   K +    A ++L  +  +G      ++  ++    + G+  +A++  
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G EPN++  N  +       R E+A   L  M      P +VTYN +I      
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR-CKPNEGT 380
            + + A+++LD+M      P   SY  I+  LC E ++  V   + +M        ++ T
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVT 388

Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           YN L  ML       EA   ++    K     +  Y  ++ +LC++G+  +A  L+ EM 
Sbjct: 389 YNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML 448

Query: 440 KYGFTP-DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
             G  P D  TY++++ G C  G +++A ++  +M  + YKP+  ++ ALL GLC++ ++
Sbjct: 449 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKS 508

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
             + E+  M  E+   PN  TY++L+ G+  + +L  + +V++E+ L+
Sbjct: 509 LEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLK 556


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 233/493 (47%), Gaps = 39/493 (7%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  K+ +A + L  M+ +G+  DV+  T L+  L K+ ++K+A  +   +    ++
Sbjct: 67  DALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLV 126

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +Y+ L++  CK G++  A   + +ME+     N +TY+SL+ G    G L+ + + 
Sbjct: 127 PNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKV 186

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L +++ K  +PN  TY+ LL+ ++K      A+ L   +   G K N+   +  +  + +
Sbjct: 187 LRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKR 246

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GR EEA      + S G +P++V+Y  L+      G+   A  L  EM   +    IVT
Sbjct: 247 SGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVT 306

Query: 311 YNILIGSLAYHGKTD----------------------------------HALKVLDEMVK 336
           +N+LI  L   GK+D                                   AL++ +EM  
Sbjct: 307 FNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 366

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEA 396
            +  P+A + N +I  LC  G+++  +  L +M      P   TY  L  +    K + A
Sbjct: 367 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNIS--SKSRRA 424

Query: 397 FAIIQS---LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
             I+Q+   L N Q    ++ Y  +I++LC+ G T +A  +L +M + G   D+ TY++L
Sbjct: 425 DTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNAL 484

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
           I G C+   ++ A   +  M      PD++ +N LL GL K+     + ++   + ++G 
Sbjct: 485 IHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGL 544

Query: 514 MPNETTYTILVEG 526
           +PN  TY  L+ G
Sbjct: 545 VPNACTYETLMCG 557



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 205/454 (45%), Gaps = 12/454 (2%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L+DAF  L +MV K   P++     LL    KA     A+ +   M   G+  +      
Sbjct: 180 LHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDA 239

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
            VN + + G +  A +LV KM   G   + V Y +L+ G    G ++ +L     +  K 
Sbjct: 240 FVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKN 299

Query: 199 LVPNAFTYSFLLEAAYK-----ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           +V +  T++ L+   +K        +++AM+ +      G  P+L +YN +L G  K+G 
Sbjct: 300 VVFDIVTFNVLINCLFKLGKSDTESIYSAMREM------GLSPDLATYNTMLNGNFKKGN 353

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              A+  + ++ S+   PN ++ NI++  LC  GR E A ++L EM      PT  TY I
Sbjct: 354 WTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRI 413

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           L+   +   + D  L+  + +V  + +     YN +I+ LC  G        L  M  R 
Sbjct: 414 LLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERG 473

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
              +  TYN L    C    ++ AF    ++ +++ S   E Y  ++  L + G  ++A 
Sbjct: 474 IIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEAD 533

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
            LL E+ K G  P++ TY +L+ G C     +E L I+  M    + P    +N L+   
Sbjct: 534 DLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYF 593

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            K  +   + E+   M  KG  P  TTY IL+ G
Sbjct: 594 SKMGKMKQAKELMNEMQTKGVSPTCTTYDILICG 627



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 185/432 (42%), Gaps = 59/432 (13%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++ +A   + +M S G KPD+V  TNL+    K+ K+  A+ + + M S  ++ D  
Sbjct: 246 RSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIV 305

Query: 135 SYTYLVNCLCK----------------------------------KGNVGYAMQLVEKME 160
           ++  L+NCL K                                  KGN   A++L  +M+
Sbjct: 306 TFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 365

Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
                 N +T N ++ GLC  G +  ++  L  ++  GL P + TY  LL  + K R   
Sbjct: 366 SRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 425

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
             ++  + ++    K +   YN+L++ LCK G T +A    +D+  +G   +  +YN L+
Sbjct: 426 TILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALI 485

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
              C+    + A    + M     SP I TYN+L+G L+  G    A  +L E+ K    
Sbjct: 486 HGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLV 545

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLD---QMFHRRCKPNEGTYNGLAMLCG----VGKV 393
           P+A +Y  +   +C   KV    +CL    +M  +   P    YN   ML G    +GK+
Sbjct: 546 PNACTYETL---MCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYN---MLIGYFSKMGKM 599

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCR------KGKTY------QAFQLLYEMTKY 441
           ++A  ++  +  K  S     Y  +I   C        G T       +A +L  EM   
Sbjct: 600 KQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDR 659

Query: 442 GFTPDSYTYSSL 453
           GF P   T + +
Sbjct: 660 GFVPCESTQACI 671



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 169/416 (40%), Gaps = 72/416 (17%)

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
           + G+  A+ L ++++  G  P++V++  +L GLCK G+  E     R++   G   N VS
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y ILL +L   G+  EA   LA M     +  ++   +LI  L   G+   A  +   + 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
           +    P+  +Y+ +I   C  G ++     L +M  + C PN  TY+ L       G + 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 395 EAFAIIQSLGNKQNSSPQ---------------------EFYKYV--------------- 418
           +AF +++ + +K N+ P                      + Y  +               
Sbjct: 182 DAFKVLRKMVHK-NAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAF 240

Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL----------- 467
           + ++ R G+  +A +L+ +M   G  PD   Y++L+ G    G +  AL           
Sbjct: 241 VNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNV 300

Query: 468 -----------------------EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
                                   I+  M E    PD+  +N +L G  K      +LE+
Sbjct: 301 VFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 360

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
           +  M  +  +PN  T  I++ G+     +E + ++LKE+ L  +   S   R+++ 
Sbjct: 361 WNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLN 416


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 212/448 (47%), Gaps = 2/448 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +LN+A   +  M ++G  P  +    +L    +   ++ A  V + M   G++PD+SSY 
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +V    + G +  A + +  M   G+  +  T   ++  LC  G +N+++ +  ++I  
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  PN   ++ L++   K+  +  A ++L++++  G KPN+ ++  L+ GLCK G TE+A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341

Query: 258 IRFFRDL-PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
            R F  L  S  ++PNV +Y  ++   C E +   A  L + M      P + TY  LI 
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                G    A ++++ M    F P+  +YN  I  LC + +     + L++ F    + 
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461

Query: 377 NEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           +  TY  L    C    + +A A    +      +       +I + CR+ K  ++ +L 
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
             +   G  P   TY+S+I   C EG I+ AL+ F  M+ +   PD   + +L+ GLCK 
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTIL 523
              D + ++++ MI++G  P E T   L
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTL 609



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 204/408 (50%), Gaps = 2/408 (0%)

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A+ +V  M++ G   +++T N ++     LG +  +    D +  +G+VP++ +Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
             ++   +++  +  A + L  +I +G  P+  +  ++LT LC+ G    AI +FR +  
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            GF+PN++++  L+  LC +G  ++A E+L EM      P + T+  LI  L   G T+ 
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340

Query: 327 ALKVLDEMVKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
           A ++  ++V+   ++P+  +Y  +I   C E K++       +M  +   PN  TY  L 
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C  G    A+ ++  +G++        Y   I SLC+K +  +A++LL +    G  
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
            D  TY+ LI+  C +  I +AL  F  M +  ++ D+   N L+   C+ ++   S  +
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           FQ+++  G +P + TYT ++     + +++L+ +    ++    V +S
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 199/448 (44%), Gaps = 7/448 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD K+ +A   L  M+ +G  PD    T +L  LC+   + +AI     M+  G  P+  
Sbjct: 229 RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI 288

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++T L++ LCKKG++  A +++E+M   G+  N  T+ +L+ GLC  G   ++ +   +L
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348

Query: 195 IQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++     PN  TY+ ++    KE  ++ A  L   +  +G  PN+ +Y  L+ G CK G 
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
              A      +  +GF PN+ +YN  + SLC + R  EA ELL +          VTY I
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI         + AL     M K  F       N +IA  C + K+    +    +    
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528

Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQA 431
             P + TY  + +  C  G +  A     ++  +    P  F Y  +I+ LC+K    +A
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNM-KRHGCVPDSFTYGSLISGLCKKSMVDEA 587

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L   M   G +P   T  +L    C      ++    +++E  D K  +     L+  
Sbjct: 588 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRN---DSANAMILLEPLDKKLWIRTVRTLVRK 644

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETT 519
           LC  ++  ++   FQ ++EK    +  T
Sbjct: 645 LCSEKKVGVAALFFQKLLEKDSSADRVT 672



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 215/462 (46%), Gaps = 3/462 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           +L +  +  ++ +A+ ++  M + G+ P + +   ++    + G + YA  + ++M   G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
              ++ +Y  +V G    G + ++ ++L  +IQ+G +P+  T + +L A  +   V+ A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
                +I  G KPNL+++  L+ GLCK+G  ++A     ++   G++PNV ++  L+  L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 284 CMEGRWEEANELLAEMDGGDR-SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
           C  G  E+A  L  ++   D   P + TY  +IG      K + A  +   M +    P+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQ 401
             +Y  +I   C  G      + ++ M      PN  TYN  +  LC   +  EA+ ++ 
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452

Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
              +    +    Y  +I   C++    QA      M K GF  D    + LI   C + 
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512

Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
            ++E+  +F ++      P  + + +++   CK    DL+L+ F  M   G +P+  TY 
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDF 563
            L+ G+  +  ++ + + L E  + + +S   V R+ + Y++
Sbjct: 573 SLISGLCKKSMVDEACK-LYEAMIDRGLSPPEVTRVTLAYEY 613



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 147/314 (46%), Gaps = 3/314 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ KLN A +   RM  +G  P+V   T L+   CKA    +A ++M +M   G +P+  
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y   ++ LCKK     A +L+ K    G   + VTY  L++  C   ++NQ+L F  R+
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + G   +    + L+ A  +++ +  + +L   +++ G  P   +Y  +++  CKEG  
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           + A+++F ++   G  P+  +Y  L+  LC +   +EA +L   M     SP  VT   L
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
                    + +A+ +L+ + K  +  +  +   ++ +LCSE KV +      ++  +  
Sbjct: 610 AYEYCKRNDSANAMILLEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDS 666

Query: 375 KPNEGTYNGLAMLC 388
             +  T       C
Sbjct: 667 SADRVTLAAFTTAC 680



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 3/267 (1%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D+  +  +  +A+  L +  S G + D V  T L+ + CK N + +A+     M  +G  
Sbjct: 436 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE 495

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            D      L+   C++  +  + +L + +   G      TY S++   C  G+++ +L++
Sbjct: 496 ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKY 555

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
              + + G VP++FTY  L+    K+  V  A KL + +I +G  P  V+   L    CK
Sbjct: 556 FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
              +  A+     L  K +   + +   L+R LC E +   A     ++   D S   VT
Sbjct: 616 RNDSANAMILLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVT 672

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKG 337
                 + +  GK +    + + + +G
Sbjct: 673 LAAFTTACSESGKNNLVTDLTERISRG 699



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 35/176 (19%)

Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT------------------ 444
           L N       E  + ++ +    G+  +A  ++ +M   G T                  
Sbjct: 138 LANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGL 197

Query: 445 -----------------PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
                            PDS +Y  ++ G   +G I+EA      M +  + PD      
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +L  LC++   + ++  F+ MI+ G  PN   +T L++G+  +  ++ + E+L+E+
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 219/455 (48%), Gaps = 1/455 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M  +G  PDVV  + ++   C   +++K +K+++ M   G+ P+  +Y  ++  LCK G 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           V  A +++ +M + G   +TV Y +L+ G C LGN+  + +  D + ++ +VP+   Y+ 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           ++    +   +  A K+ + + ++G +P+ V+Y  L+ G CK G  E+A      +   G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             PNVV+Y  L   LC  G+ + ANELL EM G      I TYN L+  L   G    A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
           K+++EM      P   ++  ++   C  G++    + L +M  R  +P   T+N L    
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  G +++   ++  +  K        Y  ++   C +       ++   M   G  PDS
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
            TY+ LI+G C    ++EA  +   M E  +     ++N+++ G  K ++   + E+F+ 
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420

Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
           M  +G   +   Y + V+    +  +E + E+  E
Sbjct: 421 MRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 197/396 (49%), Gaps = 1/396 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  K++DA   L  M+++G  PD V  T L+   CK   ++ A K+ + M    I+PD  
Sbjct: 57  KSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFI 116

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT ++  LC+ G +  A ++  KM   G   + VTY +L+ G C  G + ++    +++
Sbjct: 117 AYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM 176

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +Q GL PN  TY+ L +   K   V  A +LL ++  KG + N+ +YN L+ GLCK G  
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            +A++   ++   G  P+ +++  L+ + C  G   +A+ELL EM      PT++T+N+L
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +      G  +   ++L  M++    P+  +YN ++ + C    +    +    M  R  
Sbjct: 297 MNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGV 356

Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            P+  TYN L    C    ++EA+ + + +  K  +     Y  +I    +K K  +A +
Sbjct: 357 MPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARE 416

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
           L  EM + G   D+  Y+  +     EG +E ALE+
Sbjct: 417 LFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 173/357 (48%), Gaps = 1/357 (0%)

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +G  P+  +YS ++        +   +KL+ ++  KG KPNL +YN ++  LCK G+ ++
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A R  R++ ++G  P+ V Y  L+   C  G  + A +L  EM+     P  + Y  +I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
            L   GK   A KV ++M      P   +Y  +I   C  G+++      +QM      P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
           N  TY  LA  LC +G+V  A  ++  +  K        Y  ++  LC+ G   QA +L+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            EM   G  PD+ T+++L+   C  G + +A E+   M +   +P V  FN L+ G C S
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
              +    +   M+EKG MPN TTY  L++    ++ +  + E+ K +  R V+ +S
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 132/254 (51%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M  KG + ++    +L+  LCK+  +++A+K+ME M  +G+ PD  ++T L++  CK
Sbjct: 208 LHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCK 267

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +  A +L+ +M D G     +T+N L+ G CM G L    + L  +++KG++PN  T
Sbjct: 268 TGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTT 327

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++       +    ++   + A+G  P+  +YN+L+ G CK    +EA    +++ 
Sbjct: 328 YNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMA 387

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KGF     SYN +++    + +  EA EL  EM     +     YN+ +      G  +
Sbjct: 388 EKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNME 447

Query: 326 HALKVLDEMVKGRF 339
            AL++ DE ++  F
Sbjct: 448 TALELCDEAIENCF 461



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 141/298 (47%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++  AF    +MV  G  P+VV  T L   LCK  ++  A +++  M   G+ 
Sbjct: 158 DGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQ 217

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  +Y  LVN LCK GN+  A++L+E+ME  G   +T+T+ +L+   C  G + ++ + 
Sbjct: 218 LNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHEL 277

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
           L  ++ +GL P   T++ L+        +    +LL  ++ KG  PN  +YN L+   C 
Sbjct: 278 LREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCI 337

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
                     ++ + ++G  P+  +YNIL++  C     +EA  L  EM     + T  +
Sbjct: 338 RNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASS 397

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
           YN +I       K   A ++ +EM +      A  YN  +     EG ++  ++  D+
Sbjct: 398 YNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 80/152 (52%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L D    L  M+ KG  P+     +L+   C  N M+   ++ + M + G++PD+++Y  
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI 365

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L+   CK  N+  A  L ++M + G+     +YNS+++G      ++++ +  + + ++G
Sbjct: 366 LIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           +  +A  Y+  ++ +Y E  +  A++L D+ I
Sbjct: 426 MAADAEIYNLFVDISYGEGNMETALELCDEAI 457


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 215/460 (46%), Gaps = 1/460 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM   G +P       L   L +        K+ + ++  G  P   +++ ++   C+
Sbjct: 9   LGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCR 68

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG +     L+  M  +    N   YN ++   C+ G  + +L + + +I++G  P   T
Sbjct: 69  KGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVT 128

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ ++ A  KE  V  A KL D +   G  PN + YN L+ G  K    ++A   + ++ 
Sbjct: 129 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 188

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+ +++NIL+      GR E+ + LL ++      P    ++I +  L + G+ D
Sbjct: 189 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 248

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A++ L +M++    PS  ++N +IA     G  D   +    M H    P+  T + L 
Sbjct: 249 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 308

Query: 386 MLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
           M   + G++QEA  +I  +  K  S     +  ++    ++G    A  L  EM + G  
Sbjct: 309 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF 368

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD   +S+ I GL  +GL+EEA  +F+ M      P+   +N+L+ G CK  + + +L++
Sbjct: 369 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 428

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            ++M  +G +P+  T  +++ G+  Q  +  +  V  ++ 
Sbjct: 429 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 468



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 207/439 (47%), Gaps = 1/439 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           ++ +G +P     + ++   C+   +     ++ +M      P+A +Y  ++N  C +G 
Sbjct: 47  VIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGR 106

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+     M + G     VT+N+++   C  GN+ ++ +  D L + G  PNA  Y+ 
Sbjct: 107 TSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNT 166

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K R +  A  L +++  KG  P+ +++N+L++G  K GR E+  R  +D+   G
Sbjct: 167 LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG 226

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+   ++I +  LC  GR +EA E L +M     SP+I+ +N +I + +  G  D A 
Sbjct: 227 LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAF 286

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           +    MV     PS ++ + ++  L   G++    + + QM  +    N   +  L    
Sbjct: 287 EAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF 346

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
              G V  A ++   +  +        +   I  L ++G   +A+ +  EM + G  P++
Sbjct: 347 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 406

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           + Y+SLI G C  G + EAL++  VM      PD+   N ++ GLCK  R   ++ VF  
Sbjct: 407 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 466

Query: 508 MIEKGQMPNETTYTILVEG 526
           M + G  P+  TY  L+ G
Sbjct: 467 MHQTGLSPDIITYNTLING 485



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 211/504 (41%), Gaps = 70/504 (13%)

Query: 85  QLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
            L  ++ K H +P+      ++   C   +   A+    +M+  G  P   ++  ++N  
Sbjct: 77  SLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAF 136

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           CK+GNV  A +L + +++ G+  N + YN+L+ G   +  ++Q+    + + +KG+ P+ 
Sbjct: 137 CKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDG 196

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            T++ L+   YK        +LL DI   G  P+   +++ ++GLC  GR +EA+ F  D
Sbjct: 197 ITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMD 256

Query: 264 LPSKGFEPNVVSYNI-----------------------------------LLRSLCMEGR 288
           +  KG  P+++++N                                    LL  L + GR
Sbjct: 257 MLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGR 316

Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
            +EA EL+ +M     S   + + +L+      G    A  +  EM +    P   +++ 
Sbjct: 317 LQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSA 376

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQN 408
            I  L  +G V+       +M  +   PN   YN L  +CG                   
Sbjct: 377 FIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL--ICG------------------- 415

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                         C+ GK  +A +L   M   G  PD +T + +I GLC +G +  A+ 
Sbjct: 416 -------------FCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 462

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +F+ M +    PD+  +N L+ G CK+     +  +   M   G  P+ TTY I + G  
Sbjct: 463 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 522

Query: 529 HQDELELSAEVLKELQLRQVVSES 552
               +  +  +L EL    ++S S
Sbjct: 523 SSRRMNRAVLMLDELVSAGILSFS 546



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 133/256 (51%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + AF   + MV  G  P     ++LL  L    ++++A +++  M+  G+  +  ++T L
Sbjct: 283 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 342

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++   K+G+V  A  L  +ME  G   + V +++ + GL   G + ++      +++KGL
Sbjct: 343 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 402

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +PN F Y+ L+    K   ++ A+KL   +  +G  P++ + N+++ GLCK+GR   AI 
Sbjct: 403 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 462

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F D+   G  P++++YN L+   C       A+ L+  M     +P + TYNI I    
Sbjct: 463 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 522

Query: 320 YHGKTDHALKVLDEMV 335
              + + A+ +LDE+V
Sbjct: 523 SSRRMNRAVLMLDELV 538



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 141/292 (48%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L++A   L  M+ KG  P ++   +++    +A    KA +  ++MV  G+ P  S+ +
Sbjct: 246 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 305

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  L   G +  A +L+ +M + G   N + +  L+      G++  +      + ++
Sbjct: 306 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 365

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   +S  ++   K+  V  A  +  +++ KG  PN  +YN L+ G CK G+  EA
Sbjct: 366 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 425

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++  + +  +G  P++ + N+++  LC +GR   A  +  +M     SP I+TYN LI  
Sbjct: 426 LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLING 485

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
                   +A  +++ M      P   +YN  I   CS  +++  V  LD++
Sbjct: 486 YCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDEL 537



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)

Query: 78  KLNDAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           KLN+A L+LE+ M  +G  PD+     ++  LCK  +M+ AI V   M  +G+ PD  +Y
Sbjct: 421 KLNEA-LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITY 479

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N  CK  ++  A  LV +M   G   +  TYN  + G C    +N+++  LD L+ 
Sbjct: 480 NTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVS 539

Query: 197 KGLVPNAFTYSFLLEAAYKE 216
            G++  +F     L A  K 
Sbjct: 540 AGILSFSFACPPTLNAHTKH 559


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 224/464 (48%), Gaps = 12/464 (2%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           P       LL+   +  K     +  + M+ +G  P   +Y  +++C+CK+G++  A  L
Sbjct: 96  PKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGL 155

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            E+M+  G   +TVTYNS++ G   +G L+ ++ F + +      P+  TY+ L+    K
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCK 215

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
              +   ++   ++   G KPN+VSY+ L+   CKE   ++A++F+ D+   G  PN  +
Sbjct: 216 FGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHT 275

Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
           Y  L+ + C  G   +A  L  EM        +VTY  LI  L    +   A ++  +MV
Sbjct: 276 YTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMV 335

Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN---EGTYNGLAMLCGVGK 392
                P+ ASY  +I        +D  ++ LD+M  R  KP+    GT+  +  LCG+ K
Sbjct: 336 TAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTF--IWSLCGLEK 393

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++ A  ++  +  K   +    Y  ++ +  +     +   LL EM +      + T+  
Sbjct: 394 IEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCV 453

Query: 453 LIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           LI GLC   L+ +A++ F  +  ++  + +   + A++ GLCK  + + +  +F+ M +K
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQK 513

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           G +P+ T YT L++G   Q        V++ L LR  ++E  VE
Sbjct: 514 GLVPDRTAYTSLIDGKLKQ------GNVVQALALRDKMAEIGVE 551



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 180/395 (45%), Gaps = 8/395 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            E M  +G  PD V   +++    K  ++   +   E M S    PD  +Y  L+NC CK
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCK 215

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +   ++   +M+  G   N V+Y++LV   C    + Q+L+F   + + GLVPN  T
Sbjct: 216 FGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHT 275

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++A  K   +  A +L D++   G + N+V+Y  L+ GLC   R +EA   F  + 
Sbjct: 276 YTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMV 335

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           + G  PN+ SY  L+         + A ELL EM G    P ++ Y   I SL    K +
Sbjct: 336 TAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIE 395

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY---- 381
            A  V++EM +   + +   Y  ++            +  L++M     +    T+    
Sbjct: 396 AAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLI 455

Query: 382 NGLAMLCGVGKVQEAFA-IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           +GL     V K  + F  I    G + N++    Y  +I  LC++ +   A  L  +M +
Sbjct: 456 DGLCKNKLVSKAIDYFGRISNDFGLQANAA---IYTAMIDGLCKEDQVEAATTLFEQMAQ 512

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
            G  PD   Y+SLI G   +G + +AL +   M E
Sbjct: 513 KGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAE 547



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/493 (22%), Positives = 210/493 (42%), Gaps = 45/493 (9%)

Query: 101 ATNLLYDLCKANKMKKAIKVMEMMVSSG--IIPDASSYTYLVNCLCKKGNVGYAMQLVEK 158
           A  +L ++  +    K   V +++ S+    +P    +  L + L ++     A+Q   K
Sbjct: 29  ANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSK 88

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERG 218
           M+       T + N L+     LG  +   +F   +I  G  P  FTY+ +++   KE  
Sbjct: 89  MKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGD 148

Query: 219 VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNI 278
           + AA  L +++  +G  P+ V+YN ++ G  K GR ++ + FF ++ S   EP+V++YN 
Sbjct: 149 IEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNT 208

Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
           L+   C  G+  +  E   EM      P +V+Y+ L+ +         ALK   +M +  
Sbjct: 209 LINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG 268

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA- 396
             P+  +Y  ++   C  G +    +  D+M     + N  TY  L   LC V +++EA 
Sbjct: 269 LVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAE 328

Query: 397 --FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
             F  + + G   N +    Y  +I    +     +A +LL EM   G  PD   Y + I
Sbjct: 329 ELFGKMVTAGVIPNLAS---YTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI 385

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPD--------------------------------- 481
             LC    IE A  +   M+E   K +                                 
Sbjct: 386 WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIE 445

Query: 482 --VDNFNALLLGLCKSRRTDLSLEVF-QMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
                F  L+ GLCK++    +++ F ++  + G   N   YT +++G+  +D++E +  
Sbjct: 446 VTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATT 505

Query: 539 VLKELQLRQVVSE 551
           + +++  + +V +
Sbjct: 506 LFEQMAQKGLVPD 518



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 161/333 (48%), Gaps = 7/333 (2%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P   S N LL    + G+T+   RFF+D+   G +P V +YNI++  +C EG  E A+ L
Sbjct: 96  PKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGL 155

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
             EM      P  VTYN +I      G+ D  +   +EM      P   +YN +I   C 
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCK 215

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSP 411
            GK+   ++   +M     KPN  +Y+ L    C    +Q+A   +  ++ LG   N   
Sbjct: 216 FGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPN--- 272

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
           +  Y  ++ + C+ G    AF+L  EM++ G   +  TY++LI GLC    I+EA E+F 
Sbjct: 273 EHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFG 332

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M      P++ ++ AL+ G  K++  D +LE+   M  +G  P+   Y   +  +   +
Sbjct: 333 KMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLE 392

Query: 532 ELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           ++E +  V+ E+Q + + + + +   +M   F+
Sbjct: 393 KIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFK 425



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/370 (21%), Positives = 138/370 (37%), Gaps = 89/370 (24%)

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEM----------DGGDR--------SPTIV 309
           GF+  + SY I+   L     + +AN +L EM          D  D          P   
Sbjct: 5   GFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFG 64

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRF------------------------------ 339
            ++ L   L      + AL+   +M + R                               
Sbjct: 65  VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124

Query: 340 -----RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG-VGKV 393
                +P+  +YN +I  +C EG ++      ++M  R   P+  TYN +    G VG++
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
            +     + + +         Y  +I   C+ GK  +  +   EM + G  P+  +YS+L
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTL 244

Query: 454 IRGLCMEGLIEEALEIFVVME-------EYDYKPDVD----------------------- 483
           +   C E ++++AL+ +V M        E+ Y   VD                       
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304

Query: 484 -----NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
                 + AL+ GLC   R   + E+F  M+  G +PN  +YT L+ G      ++ + E
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALE 364

Query: 539 VLKELQLRQV 548
           +L E++ R +
Sbjct: 365 LLDEMKGRGI 374



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)

Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
           K    F +L+  T+    P    + +L   L  E + EEAL+ F  M+     P   + N
Sbjct: 44  KDCDVFDVLWS-TRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCN 102

Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
            LL    +  +TD     F+ MI  G  P   TY I+++ +  + ++E ++ + +E++ R
Sbjct: 103 GLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFR 162

Query: 547 QVVSES 552
            ++ ++
Sbjct: 163 GLIPDT 168



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
           L+  LCK   + KAI     + +  G+  +A+ YT +++ LCK+  V  A  L E+M   
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQK 513

Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           G   +   Y SL+ G    GN+ Q+L   D++ + G+   A
Sbjct: 514 GLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 224/461 (48%), Gaps = 6/461 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +E M     K D      L++   +AN M+KA++ +      G  P A +Y+ ++    K
Sbjct: 18  VESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMK 77

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G+V   + + ++M    +  +  T+N L+  L     + ++      + +  + P+ +T
Sbjct: 78  GGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYT 137

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L+ +      + A MKL + + A+G +PNL +Y+ ++      GR +EA   F+ + 
Sbjct: 138 YTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMV 197

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTI-VTYNILIGSLAYHGKT 324
            KG +P+ V+YNIL+ +    G+ E A + +    G  RS T  VTYN L+ SL   G  
Sbjct: 198 QKGLQPDAVTYNILIDAFGKTGQLERAFDFV----GKSRSFTNEVTYNSLLSSLGRKGDI 253

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG- 383
              +++  +M       +  +Y  +I RL   G+V+ V +   +M     K +  T N  
Sbjct: 254 QGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNV 313

Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
           L  L   G+V+ AF + Q +  K  ++    Y  +I  L R GK   A  LL EM + G 
Sbjct: 314 LDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGC 373

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+  TY++LI        +  A  +F+ M+E    P+V ++++L+ G  K+ RTD ++ 
Sbjct: 374 APNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAIS 433

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +F+ M  +G  PN  TY +L++ +        + E L+E++
Sbjct: 434 LFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMR 474



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 151/303 (49%), Gaps = 4/303 (1%)

Query: 81  DAFLQL-ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           DA ++L E M ++G +P++    ++++    A ++ +A  + + MV  G+ PDA +Y  L
Sbjct: 152 DAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNIL 211

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++   K G +  A   V K   +   TN VTYNSL+  L   G++   ++   ++  KGL
Sbjct: 212 IDAFGKTGQLERAFDFVGKSRSF---TNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGL 268

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           V N  TY+ L+E       V    +L  +++    K ++V+ N +L  L K GR E A  
Sbjct: 269 VSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFE 328

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F+D+  KG   + V+YNIL+  L   G+ + A  LL EM+    +P I+TYN LI S  
Sbjct: 329 LFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYG 388

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
                  A ++  EM +    P+  SY+ +I      G+ D  +    +M    C PN  
Sbjct: 389 KWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHV 448

Query: 380 TYN 382
           TYN
Sbjct: 449 TYN 451



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 121/228 (53%)

Query: 88  RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           +M +KG   + +    L+  L  A +++   ++   MV + I  D  +   +++CL K G
Sbjct: 262 QMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAG 321

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
            V  A +L + M+  G   +TVTYN L+ GL   G L+ +   L  + + G  PN  TY+
Sbjct: 322 RVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYN 381

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
            L+ +  K   + AA +L  ++  +G  PN+VSY+ L+ G  K GRT+ AI  FR++ ++
Sbjct: 382 TLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAE 441

Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           G  PN V+YN+L+  L   GR+  A E L EM         VT ++L+
Sbjct: 442 GCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 108/204 (52%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ D +     MV    K D+V   N+L  L KA +++ A ++ + M   G+  D  +Y 
Sbjct: 287 RVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYN 346

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+N L + G +  A  L+ +ME+ G   N +TYN+L+       NL+ + +    + ++
Sbjct: 347 ILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKER 406

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  +YS L+E   K     AA+ L  ++ A+G  PN V+YN+L+  L + GR   A
Sbjct: 407 GVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAA 466

Query: 258 IRFFRDLPSKGFEPNVVSYNILLR 281
           + + R++   G +   V+ ++L+R
Sbjct: 467 MEYLREMRDAGCQMGKVTKSLLVR 490



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 146/369 (39%), Gaps = 68/369 (18%)

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           +LT L    R ++  R    +     + +   +N L+         E+A + LA      
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 304 RSPTIVTY-----------------------------------NILIGSLAYHGKTDHAL 328
             PT  TY                                   NILI SLA   + + A 
Sbjct: 61  GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
            V  +M K    P   +Y  +I  L + G++D V+K  + M  + C+PN  TY+ +    
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180

Query: 389 G-VGKVQEAFAIIQSL--------------------------------GNKQNSSPQEFY 415
           G  G+V EA  I Q +                                G  ++ + +  Y
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTY 240

Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
             +++SL RKG      +L  +M   G   +  TY+ LI  L   G +E+  ++++ M +
Sbjct: 241 NSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVD 300

Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
            D K D+   N +L  L K+ R + + E+FQ M  KG   +  TY IL+ G+    +L+ 
Sbjct: 301 NDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDA 360

Query: 536 SAEVLKELQ 544
           +  +L E++
Sbjct: 361 AGALLLEME 369



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 60/136 (44%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL+ A   L  M   G  P+++    L+    K + +  A ++   M   G+ P+  
Sbjct: 354 RAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVV 413

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SY+ L+    K G    A+ L  +M+  G P N VTYN L+  L   G    ++++L  +
Sbjct: 414 SYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREM 473

Query: 195 IQKGLVPNAFTYSFLL 210
              G      T S L+
Sbjct: 474 RDAGCQMGKVTKSLLV 489


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 215/461 (46%), Gaps = 2/461 (0%)

Query: 74  HRDHKL-NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           + D+K+  +A    E M  KG   D       L  L +  ++   ++    MV+  +   
Sbjct: 169 YADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVT 228

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             S T +++ LCK+G+V    +L++++   G   N VTYN+ + G     +L    + L 
Sbjct: 229 VYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT 288

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            + ++G+  N  TY+ L+        +  A +L +++  KG + ++  Y  +++  C+ G
Sbjct: 289 LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSG 348

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             + A+  F ++  KG  P+  +Y  L+  +C  G+ E A  L+ EM G       V +N
Sbjct: 349 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 408

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI      G  D AL++   M K        +YN I + LC   + D     L  M  R
Sbjct: 409 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 468

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
              PN  ++  L  + C  G   EA  + + +  K N      Y  +I    ++G   +A
Sbjct: 469 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 528

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            +L  E+   G  PD YT +SLI G C++G ++ AL++F  M +    P+V  + A++ G
Sbjct: 529 HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 588

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
           L K  R++ + +++  M E G  P++T Y+ LV  +   DE
Sbjct: 589 LSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADE 629



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 208/444 (46%), Gaps = 2/444 (0%)

Query: 103 NLLYDLCKANKM-KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMED 161
           +LL+ +   NKM  +A++  E M   G   D  S    +  L + G V   ++   +M +
Sbjct: 163 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVN 222

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
                   +   ++ GLC  G++    + +D +  KG+  N  TY+  +E  +K   +  
Sbjct: 223 LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 282

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
             ++L  +  +G   N+V+Y +L+ G    G+ EEA R F ++  KG E +V  Y  ++ 
Sbjct: 283 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 342

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
             C  G  + A  L  EM      P+  TY  LI  +   G+ + A  +++EM       
Sbjct: 343 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 402

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII 400
           +   +N +I   C  G VD  ++    M  +  + +   YN +A  LC + +  EA  ++
Sbjct: 403 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 462

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
            S+  +  S     +  +I   C++G   +A ++  EM + G  P+  TY+ LI G    
Sbjct: 463 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 522

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           G ++EA ++   +E     PDV    +L+ G C   + D++L++F  M ++G +PN  TY
Sbjct: 523 GNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTY 582

Query: 521 TILVEGIAHQDELELSAEVLKELQ 544
           T ++ G++     E + ++  E++
Sbjct: 583 TAMISGLSKDGRSEEAFKLYDEMK 606


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 218/466 (46%), Gaps = 13/466 (2%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           + R  +K   PD+     L+   C A  +      +  ++ +G+  DA ++T L+  LC 
Sbjct: 1   MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60

Query: 146 KGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG--LVPN 202
           K     AM +V  +M + G   +  +Y++L++GLC      ++ + +  + + G    P+
Sbjct: 61  KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             +YS ++   +KE  V  A  L   ++  G  PN+V+ N ++ GLCK    ++A    +
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  +   PN  +YN L+      G+W EA  +L EM    + P +VTYN+LI  L   G
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
               A ++ + M++   +P A +Y  ++    +EG +  +    D M     + N  T++
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300

Query: 383 -GLAMLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
             +   C  G++ EA   F  +Q LG   +      Y  VI  LC+ G+   A     +M
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVT---YTTVIDGLCKIGRLDDAMSRFCQM 357

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
              G +P+  T+++LI G  M G  E+A E+F  M +    PDV  F A++  L K  + 
Sbjct: 358 IDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKV 417

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
             + ++F +M   G  PN  +Y  ++ G     E+    EV+K L 
Sbjct: 418 TEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEV---GEVMKLLD 460



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 210/453 (46%), Gaps = 4/453 (0%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSYT 137
           LN  F  L +++  G + D V  T LL  LC   +   A+  V+  M   G  PD  SY+
Sbjct: 29  LNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYS 88

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYG--YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
            L+  LC +     A +L+  M + G   P + V+Y++++ G    G++ ++     +++
Sbjct: 89  TLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKML 148

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
             G+ PN  T + +++   K + +  A  +L  +I +   PN  +YN L+ G    G+  
Sbjct: 149 DHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWT 208

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA+R  +++   G  PNVV+YN+L+  LC  G   EA E+   M      P   TY  L+
Sbjct: 209 EAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLL 268

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
              A  G       V D MV+   R +  +++  I   C  G++D       +M      
Sbjct: 269 HGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFM 328

Query: 376 PNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
           P+  TY   +  LC +G++ +A +    + +   S     +  +I      GK  +A +L
Sbjct: 329 PDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEEL 388

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
            YEM   G  PD   ++++I  L  EG + EA ++F +M     KP+V ++N ++ G   
Sbjct: 389 FYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFI 448

Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           +      +++   M+  G  P   T+  L++G+
Sbjct: 449 AGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 481



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 200/449 (44%), Gaps = 52/449 (11%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  +  A+    +M+  G  P+VV   +++  LCK   M KA  V++ M+   I+P+ +
Sbjct: 133 KEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCT 192

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L++     G    A++++++M   G   N VTYN L+  LC  G   ++ +  + +
Sbjct: 193 TYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSM 252

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGR 253
           IQ G  P+A TY  LL   Y   G    M  + D++ + G + N  ++++ +   CK GR
Sbjct: 253 IQSGPKPDATTYGSLLH-GYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGR 311

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EA   F  +   GF P++V+Y  ++  LC  GR ++A     +M     SP I+T+  
Sbjct: 312 LDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTT 371

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           LI   + +GK + A ++  EM+     P    +  +I RL  EGKV    K  D M    
Sbjct: 372 LIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAG 431

Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            KPN  +YN +                              + Y I      G+  +  +
Sbjct: 432 AKPNVVSYNTM-----------------------------IHGYFIA-----GEVGEVMK 457

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           LL +M   G  P + T+++L+ G+   GL                KPDVD    L+   C
Sbjct: 458 LLDDMLLIGLKPTAVTFNTLLDGMVSMGL----------------KPDVDTCKTLIDSCC 501

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
           +  R +  L +F+ M+ K    +  T  I
Sbjct: 502 EDGRIEDILTLFREMLGKADKTDTITENI 530



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 170/395 (43%), Gaps = 39/395 (9%)

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
           R   K + P+  T+  L+        ++     L  II  G + + V++  LL  LC + 
Sbjct: 3   RAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKK 62

Query: 253 RTEEAIRF-FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--DGGDRSPTIV 309
           RT +A+    R +P  G  P+V SY+ LL+ LC E + EEA EL+  M  DG +  P +V
Sbjct: 63  RTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVV 122

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           +Y+ +I      G    A  +  +M+     P+  + N +I  LC    +D     L QM
Sbjct: 123 SYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 182

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
                 PN  TYN L       G+  EA  I++ +           Y  +I  LC+ G  
Sbjct: 183 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFH 242

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGL------------------------------- 457
            +A ++   M + G  PD+ TY SL+ G                                
Sbjct: 243 AEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIE 302

Query: 458 ----CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
               C  G ++EA   F+ M++  + PD+  +  ++ GLCK  R D ++  F  MI+ G 
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362

Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
            PN  T+T L+ G +   + E + E+  E+  R +
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGI 397



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 16/203 (7%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L+DA  +  +M+  G  P+++  T L++      K +KA ++   M+  GI PD + +T
Sbjct: 346 RLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFT 405

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ L K+G V  A +L + M   G   N V+YN+++ G  + G + + ++ LD ++  
Sbjct: 406 AMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI 465

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P A T++                 LLD +++ G KP++ +   L+   C++GR E+ 
Sbjct: 466 GLKPTAVTFN----------------TLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDI 509

Query: 258 IRFFRDLPSKGFEPNVVSYNILL 280
           +  FR++  K  + + ++ NI L
Sbjct: 510 LTLFREMLGKADKTDTITENIKL 532


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 207/439 (47%), Gaps = 1/439 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           ++ +G +P     + ++   C+   +     ++ +M      P+A +Y  ++N  C +G 
Sbjct: 257 VIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGR 316

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A+     M + G     VT+N+++   C  GN+ ++ +  D L + G  PNA  Y+ 
Sbjct: 317 TSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNT 376

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           L+    K R +  A  L +++  KG  P+ +++N+L++G  K GR E+  R  +D+   G
Sbjct: 377 LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG 436

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
             P+   ++I +  LC  GR +EA E L +M     SP+I+ +N +I + +  G  D A 
Sbjct: 437 LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAF 496

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-ML 387
           +    MV     PS ++ + ++  L   G++    + + QM  +    N   +  L    
Sbjct: 497 EAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF 556

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
              G V  A ++   +  +        +   I  L ++G   +A+ +  EM + G  P++
Sbjct: 557 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 616

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
           + Y+SLI G C  G + EAL++  VM      PD+   N ++ GLCK  R   ++ VF  
Sbjct: 617 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 676

Query: 508 MIEKGQMPNETTYTILVEG 526
           M + G  P+  TY  L+ G
Sbjct: 677 MHQTGLSPDIITYNTLING 695



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 215/460 (46%), Gaps = 1/460 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L RM   G +P       L   L +        K+ + ++  G  P   +++ ++   C+
Sbjct: 219 LGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCR 278

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
           KG +     L+  M  +    N   YN ++   C+ G  + +L + + +I++G  P   T
Sbjct: 279 KGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVT 338

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           ++ ++ A  KE  V  A KL D +   G  PN + YN L+ G  K    ++A   + ++ 
Sbjct: 339 FNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 398

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            KG  P+ +++NIL+      GR E+ + LL ++      P    ++I +  L + G+ D
Sbjct: 399 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 458

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A++ L +M++    PS  ++N +IA     G  D   +    M H    P+  T + L 
Sbjct: 459 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 518

Query: 386 MLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
           M   + G++QEA  +I  +  K  S     +  ++    ++G    A  L  EM + G  
Sbjct: 519 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF 578

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD   +S+ I GL  +GL+EEA  +F+ M      P+   +N+L+ G CK  + + +L++
Sbjct: 579 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 638

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            ++M  +G +P+  T  +++ G+  Q  +  +  V  ++ 
Sbjct: 639 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 678



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 226/507 (44%), Gaps = 44/507 (8%)

Query: 86  LERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLC 144
           L  ++ K H +P+      ++   C   +   A+    +M+  G  P   ++  ++N  C
Sbjct: 288 LLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFC 347

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           K+GNV  A +L + +++ G+  N + YN+L+ G   +  ++Q+    + + +KG+ P+  
Sbjct: 348 KEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGI 407

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           T++ L+   YK        +LL DI   G  P+   +++ ++GLC  GR +EA+ F  D+
Sbjct: 408 TFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDM 467

Query: 265 PSKGFEPNVVSYNI-----------------------------------LLRSLCMEGRW 289
             KG  P+++++N                                    LL  L + GR 
Sbjct: 468 LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRL 527

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           +EA EL+ +M     S   + + +L+      G    A  +  EM +    P   +++  
Sbjct: 528 QEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAF 587

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
           I  L  +G V+       +M  +   PN   YN L    C  GK+ EA   ++ +   + 
Sbjct: 588 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALK-LEKVMRHRG 646

Query: 409 SSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             P  F    +I  LC++G+   A  +  +M + G +PD  TY++LI G C    +  A 
Sbjct: 647 LLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNAD 706

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
            +   M      PD+  +N  + G C SRR + ++ +   ++  G +PN  TY  ++ G+
Sbjct: 707 NLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGV 766

Query: 528 AHQDELE----LSAEVLKELQLRQVVS 550
              D L+    L+A +LK   +  VV+
Sbjct: 767 C-SDILDRAMILTARLLKMAFVPNVVT 792



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 144/277 (51%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           + AF   + MV  G  P     ++LL  L    ++++A +++  M+  G+  +  ++T L
Sbjct: 493 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 552

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           ++   K+G+V  A  L  +ME  G   + V +++ + GL   G + ++      +++KGL
Sbjct: 553 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           +PN F Y+ L+    K   ++ A+KL   +  +G  P++ + N+++ GLCK+GR   AI 
Sbjct: 613 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 672

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            F D+   G  P++++YN L+   C       A+ L+  M     +P + TYNI I    
Sbjct: 673 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 732

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
              + + A+ +LDE+V     P+  +YN ++  +CS+
Sbjct: 733 SSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD 769



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 185/416 (44%), Gaps = 35/416 (8%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
           LC A ++ +A++ +  M+  G+ P   ++  ++    + G    A +  + M  +G   +
Sbjct: 451 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 510

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
             T +SL+ GL + G L ++ + + ++I+KGL  N   ++ LL+  +K   V  A  L  
Sbjct: 511 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 570

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           ++  +G  P++V+++  + GL K+G  EEA   F ++  KG  PN  +YN L+   C  G
Sbjct: 571 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 630

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           +  EA +L   M      P I T N++IG L   G+   A+ V  +M +    P   +YN
Sbjct: 631 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 690

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQ 407
            +I   C    +      +++M+     P+  TYN                         
Sbjct: 691 TLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN------------------------- 725

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                      I   C   +  +A  +L E+   G  P++ TY+S++ G+C + +++ A+
Sbjct: 726 ---------IRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD-ILDRAM 775

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
            +   + +  + P+V   N LL    K    + +L     + E     +E TY I+
Sbjct: 776 ILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIM 831



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 181/391 (46%), Gaps = 5/391 (1%)

Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
           Y ++    +SL+R         Q+L+ L R+ + G+ P+A   + L +   +        
Sbjct: 192 YESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVW 251

Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
           KL  D+I +G +P   +++ ++ G C++G           +P    EPN  +YNI++ + 
Sbjct: 252 KLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINAC 311

Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
           C+ GR  +A      M     +PT+VT+N +I +    G    A K+ D + +  F P+A
Sbjct: 312 CIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNA 371

Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAII 400
             YN ++       ++D      ++M  +   P+  T+N   ++ G    G+ ++   ++
Sbjct: 372 IMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFN--ILVSGHYKYGREEDGDRLL 429

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
           + +        +  +   ++ LC  G+  +A + L +M + G +P    ++S+I      
Sbjct: 430 KDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 489

Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
           GL ++A E + +M  +   P     ++LL+GL  + R   + E+   MIEKG   N   +
Sbjct: 490 GLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAF 549

Query: 521 TILVEGIAHQDELELSAEVLKELQLRQVVSE 551
           T+L++    + ++  +  +  E++ R +  +
Sbjct: 550 TVLLDKFFKRGDVVGAQSLWGEMERRGIFPD 580



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 2/313 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +L++A   L  M+ KG  P ++   +++    +A    KA +  ++MV  G+ P  S+ +
Sbjct: 456 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 515

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  L   G +  A +L+ +M + G   N + +  L+      G++  +      + ++
Sbjct: 516 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 575

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ P+   +S  ++   K+  V  A  +  +++ KG  PN  +YN L+ G CK G+  EA
Sbjct: 576 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 635

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           ++  + +  +G  P++ + N+++  LC +GR   A  +  +M     SP I+TYN LI  
Sbjct: 636 LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLING 695

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                   +A  +++ M      P   +YN  I   CS  +++  V  LD++      PN
Sbjct: 696 YCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPN 755

Query: 378 EGTYNGLAMLCGV 390
             TYN  +ML GV
Sbjct: 756 TVTYN--SMLNGV 766



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 22/270 (8%)

Query: 78  KLNDAFLQLER-MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           KLN+A L+LE+ M  +G  PD+     ++  LCK  +M+ AI V   M  +G+ PD  +Y
Sbjct: 631 KLNEA-LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITY 689

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+N  CK  ++  A  LV +M   G   +  TYN  + G C    +N+++  LD L+ 
Sbjct: 690 NTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVS 749

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G+VPN  TY+ +L     +  +  AM L   ++     PN+V+ N+LL+   K+G  E 
Sbjct: 750 AGIVPNTVTYNSMLNGVCSDI-LDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPER 808

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT--------- 307
            + +   L    +  + ++Y I+          ++A+ +L + D    +           
Sbjct: 809 TLMWGHKLSEIPYAFDEITYKIM----------DKAHHILEDADFSRVTSAKSLFLDFLM 858

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
            +TY+       +   T H LK++D    G
Sbjct: 859 YITYDYFCRYRPHSETTQHPLKLIDRSYSG 888


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 229/484 (47%), Gaps = 2/484 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  DA+  LER   KG  P VV    +L  L +  ++ +A+K  E M    I P+ S+Y 
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK G +  A+ + + M+D G   N +T N +V  LC    L+ +    + L  K
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+A TY  L+E   +   V  A KL + ++     PN V Y  L+    K GR E+ 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + + ++   G  P+++  N  +  +   G  E+   L  E+      P   +Y ILI  
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G    A ++   M +        +YN +I   C  GKV+   + L++M  +  +P 
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  L  + ++ EA+ + +   +K        Y  +I    + G+  +A+ ++ 
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+ + G TP+ YT++ L+  L     I EAL  F  M++    P+   ++ L+ GLCK R
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           + + +   +Q M ++G  PN  TYT ++ G+A    +  +  + ++ + +  V++SA+  
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833

Query: 557 LVMQ 560
            +++
Sbjct: 834 AIIE 837



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 215/479 (44%), Gaps = 4/479 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A +  + M   G  P+V+    ++  LCKA ++  A  + E +      PDA +Y 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  L + G V  A +L E+M D     N V Y SL+R     G      +  + +++ 
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+    +  ++  +K   +     L  +I   G  P+  SY +L+ GL K G   EA
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +  +G   +  +YN ++   C  G+  +A +LL EM      PT+VTY  +I  
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           LA   + D A  + +E        +   Y+ +I      G++D     ++++  +   PN
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T+N L   L    ++ EA    QS+ + + +     Y  +I  LC+  K  +AF    
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K GF P+ +TY+++I GL   G I EA  +F   +E     D   +NA++ GL  + 
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA---EVLKELQLRQVVSES 552
           R   +  +F+    KG      T  +L++ +   + +E +A    VL+E    Q  + S
Sbjct: 844 RASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARS 902



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 206/454 (45%), Gaps = 2/454 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K N     LE M   G  P       ++    K+ K+++A   ++ M      P  S
Sbjct: 142 RTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFS 201

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+  L    +    + L ++M++ GY  N   + +L+R     G ++ +L  LD +
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               L P+   Y+  ++   K   V  A K   ++ A G   + V+Y  ++  LCK  R 
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRL 321

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA+  F  +      P   +YN ++    M G++E+A  LL         P++V+YN +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G+ D ALK  +EM K    P+ ++YN +I  LC  GK++  +   D M     
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  T N +   LC   ++ +A +I + L +K        Y  +I  L R G+  +A++
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  +M      P++  Y+SLIR     G  E+  +I+  M      PD+   N  +  + 
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           K+   +    +FQ +   G +P+  +YTIL+ G+
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 107/463 (23%), Positives = 206/463 (44%), Gaps = 4/463 (0%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F   ER+  + H  +   +  LL  + +  K     +++E M  +G  P  ++   +V  
Sbjct: 117 FRWAERLTDRAHCREAYNS--LLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLS 174

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K   +  A   ++ M    +      Y +L+  L    + +  L    ++ + G   N
Sbjct: 175 FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN 234

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              ++ L+    +E  V AA+ LLD++ +   +P++V YNV +    K G+ + A + F 
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFH 294

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++ + G   + V+Y  ++  LC   R  EA EL   MD   + P    YN +I      G
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K + A  +L+   +    PS  SYN I++ L  +G+VD  +K  ++M  +   PN  TYN
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYN 413

Query: 383 -GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             + MLC  GK++ A  +  ++ +            ++  LC+  +   A  +   +   
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
              PD+ TY SLI GL   G ++EA +++  M + +  P+   + +L+    K  R +  
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +++  M+  G  P+       ++ +    E+E    + +E++
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 186/402 (46%), Gaps = 1/402 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++++A+   E+M+     P+ V  T+L+ +  K  + +   K+   M+  G  PD  
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
                ++C+ K G +     L +++++ G+  +  +Y  L+ GL   G  +++ +    +
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G V +   Y+ +++   K   V+ A +LL+++  KG +P +V+Y  ++ GL K  R 
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F +  SKG E NVV Y+ L+      GR +EA  ++ E+     +P + T+N L
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + +L    +   AL     M   +  P+  +Y+ +I  LC   K +       +M  +  
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPN  TY  + + L   G + EA  + +    K   +    Y  +I  L    +   A++
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           L  E    G +  + T   L+  L     IE+A  +  V+ E
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRE 892



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 1/175 (0%)

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           K++EAF  IQ++   +       Y  +I +L     +     L  +M + G+  + + ++
Sbjct: 180 KLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFT 239

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LIR    EG ++ AL +   M+    +PDV  +N  +    K+ + D++ + F  M   
Sbjct: 240 TLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKAN 299

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKEL-QLRQVVSESAVERLVMQYDFEG 565
           G + ++ TYT ++  +   D L  + E+ + + Q +QV    A   ++M Y   G
Sbjct: 300 GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 70/152 (46%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++++A +  + M      P+ +  + L++ LCK  K  KA    + M   G  
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT +++ L K GN+  A  L EK ++ G   ++  YN+++ GL      + + + 
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRL 851

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
            +    KG      T   LL++ +K   +  A
Sbjct: 852 FEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883


>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Glycine max]
          Length = 626

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 208/432 (48%), Gaps = 3/432 (0%)

Query: 110 KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTV 169
           KA  ++K +      + +  IP+  +   L++ L +   +G    + E+M   G   N  
Sbjct: 190 KAGMVEKGLATFRRNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAY 249

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
           T+N +   LC  G+ ++  +FLD++ ++G  P+  TY+ L+ +  K+R +  A  L   +
Sbjct: 250 TFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIM 309

Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
             +G  PNL+++ VL+ GLC+EG+ +EA + F  +  +G +P+VVSYN L+   C EG+ 
Sbjct: 310 YIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKM 369

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
           +    LL EM G    P  VT  +++   A  GK   AL  + E+ + R +     Y+ +
Sbjct: 370 QMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYL 429

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQN 408
           I  LC EG+       L ++      P   TYN L   LC    V+EA  +   +  +  
Sbjct: 430 IVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSM 489

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
                 Y+ VI+ LCR  +T +A  LL EM   G  PD     +LI G C E  +++A+ 
Sbjct: 490 ILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVS 549

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
           +           D +++NA++   C        LE+   +++ G + N  T   ++ G+ 
Sbjct: 550 LLKFFANEFQVYDTESYNAVVKVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGL- 608

Query: 529 HQDELELSAEVL 540
            Q  +E   E+L
Sbjct: 609 -QKAMEQDDEML 619


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 229/484 (47%), Gaps = 2/484 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K  DA+  LER   KG  P VV    +L  L +  ++ +A+K  E M    I P+ S+Y 
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK G +  A+ + + M+D G   N +T N +V  LC    L+ +    + L  K
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
              P+A TY  L+E   +   V  A KL + ++     PN V Y  L+    K GR E+ 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            + + ++   G  P+++  N  +  +   G  E+   L  E+      P   +Y ILI  
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           L   G    A ++   M +        +YN +I   C  GKV+   + L++M  +  +P 
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  L  + ++ EA+ + +   +K        Y  +I    + G+  +A+ ++ 
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           E+ + G TP+ YT++ L+  L     I EAL  F  M++    P+   ++ L+ GLCK R
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVER 556
           + + +   +Q M ++G  PN  TYT ++ G+A    +  +  + ++ + +  V++SA+  
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833

Query: 557 LVMQ 560
            +++
Sbjct: 834 AIIE 837



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 215/479 (44%), Gaps = 4/479 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           KL  A +  + M   G  P+V+    ++  LCKA ++  A  + E +      PDA +Y 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+  L + G V  A +L E+M D     N V Y SL+R     G      +  + +++ 
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P+    +  ++  +K   +     L  +I   G  P+  SY +L+ GL K G   EA
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEA 603

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              F  +  +G   +  +YN ++   C  G+  +A +LL EM      PT+VTY  +I  
Sbjct: 604 YELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDG 663

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
           LA   + D A  + +E        +   Y+ +I      G++D     ++++  +   PN
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             T+N L   L    ++ EA    QS+ + + +     Y  +I  LC+  K  +AF    
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K GF P+ +TY+++I GL   G I EA  +F   +E     D   +NA++ GL  + 
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA---EVLKELQLRQVVSES 552
           R   +  +F+    KG      T  +L++ +   + +E +A    VL+E    Q  + S
Sbjct: 844 RASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAARS 902



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 206/454 (45%), Gaps = 2/454 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K N     LE M   G  P       ++    K+ K+++A   ++ M      P  S
Sbjct: 142 RTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFS 201

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L+  L    +    + L ++M++ GY  N   + +L+R     G ++ +L  LD +
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               L P+   Y+  ++   K   V  A K   ++ A G   + V+Y  ++  LCK  R 
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRL 321

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
            EA+  F  +      P   +YN ++    M G++E+A  LL         P++V+YN +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           +  L   G+ D ALK  +EM K    P+ ++YN +I  LC  GK++  +   D M     
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
            PN  T N +   LC   ++ +A +I + L +K        Y  +I  L R G+  +A++
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYK 500

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           L  +M      P++  Y+SLIR     G  E+  +I+  M      PD+   N  +  + 
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           K+   +    +FQ +   G +P+  +YTIL+ G+
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 207/463 (44%), Gaps = 4/463 (0%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           F   ER+  + H  +   +  LL  + +  K     +++E M  +G  P  ++   +V  
Sbjct: 117 FRWAERLTDRAHCREAYNS--LLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLS 174

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K   +  A   ++ M    +      Y +L+  L    + +  L    ++ + G   N
Sbjct: 175 FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVN 234

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
              ++ L+    +E  V AA+ LLD++ +   +P++V YNV +    K G+ + A +FF 
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFH 294

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++ + G   + V+Y  ++  LC   R  EA EL   MD   + P    YN +I      G
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
           K + A  +L+   +    PS  SYN I++ L  +G+VD  +K  ++M  +   PN  TYN
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYN 413

Query: 383 -GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
             + MLC  GK++ A  +  ++ +            ++  LC+  +   A  +   +   
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
              PD+ TY SLI GL   G ++EA +++  M + +  P+   + +L+    K  R +  
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
            +++  M+  G  P+       ++ +    E+E    + +E++
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 186/402 (46%), Gaps = 1/402 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++++A+   E+M+     P+ V  T+L+ +  K  + +   K+   M+  G  PD  
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
                ++C+ K G +     L +++++ G+  +  +Y  L+ GL   G  +++ +    +
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G V +   Y+ +++   K   V+ A +LL+++  KG +P +V+Y  ++ GL K  R 
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           +EA   F +  SKG E NVV Y+ L+      GR +EA  ++ E+     +P + T+N L
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + +L    +   AL     M   +  P+  +Y+ +I  LC   K +       +M  +  
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790

Query: 375 KPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPN  TY  + + L   G + EA  + +    K   +    Y  +I  L    +   A++
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
           L  E    G +  + T   L+  L     IE+A  +  V+ E
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRE 892



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 1/175 (0%)

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
           K++EAF  IQ++   +       Y  +I +L     +     L  +M + G+  + + ++
Sbjct: 180 KLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFT 239

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           +LIR    EG ++ AL +   M+    +PDV  +N  +    K+ + D++ + F  M   
Sbjct: 240 TLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKAN 299

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKEL-QLRQVVSESAVERLVMQYDFEG 565
           G + ++ TYT ++  +   D L  + E+ + + Q +QV    A   ++M Y   G
Sbjct: 300 GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 70/152 (46%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +  ++++A +  + M      P+ +  + L++ LCK  K  KA    + M   G  
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  +YT +++ L K GN+  A  L EK ++ G   ++  YN+++ GL      + + + 
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRL 851

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
            +    KG      T   LL++ +K   +  A
Sbjct: 852 FEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 235/516 (45%), Gaps = 41/516 (7%)

Query: 83  FLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
            L  E+M+ KG  P V     +L  L  +  M KA +V E MV  GI+P   ++  +++ 
Sbjct: 224 LLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDS 283

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
             K G++    ++  +M+      + VTYN L+ G    G + ++ +F   + + G    
Sbjct: 284 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVT 343

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            ++++ L+E   K+     A  + D+++  G  P   +YN+ +  LC+ GR ++A    R
Sbjct: 344 PYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDA----R 399

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           +L S    P+VVSYN L+       ++ EA+ L  ++  G+ +P+IVTYN LI  L   G
Sbjct: 400 ELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESG 459

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             + A ++ +EM      P   +Y  ++      G + +  +  D+M  +  KP+   Y 
Sbjct: 460 NLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYT 519

Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEMTK 440
              +    +G  ++AF + + +  + + +P    Y   I  LC+ G   +A +   ++ +
Sbjct: 520 TRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFR 579

Query: 441 YGFTPDSYTYSSLIRGL-----------------------------------CMEGLIEE 465
            G  PD  TY+++IRG                                       G +E+
Sbjct: 580 VGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQ 639

Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
           A +    M++   +P+V   NALL G+CK+   D +      M E+G  PN+ +YTIL+ 
Sbjct: 640 AFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILIS 699

Query: 526 GIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
                D+ E   ++ KE+  +++  +    R + ++
Sbjct: 700 KHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKH 735



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 211/496 (42%), Gaps = 42/496 (8%)

Query: 75  RDHKL-NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
           RD ++ N A    E MV  G  P V+    +L    KA  +++  K+   M    I    
Sbjct: 250 RDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE 309

Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
            +Y  L+N   K G +  A +    M+  G+P    ++N L+ G C  G  +++    D 
Sbjct: 310 VTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDE 369

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           ++  G+ P   TY+  + A  +   +  A +LL  + A    P++VSYN L+ G  K  +
Sbjct: 370 MLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRK 425

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA   F DL +    P++V+YN L+  LC  G  E A  L  EM      P ++TY  
Sbjct: 426 FVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTT 485

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY--------------------------- 346
           L+     +G    A ++ DEM++   +P   +Y                           
Sbjct: 486 LLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAED 545

Query: 347 ---------NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA 396
                    N  I  LC  G ++  ++   ++F     P+  TY  +       G+ + A
Sbjct: 546 HHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMA 605

Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
             +   + +K+ S     Y  +I    + G+  QAFQ   EM K G  P+  T+++L+ G
Sbjct: 606 RDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHG 665

Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
           +C  G I+EA      MEE    P+  ++  L+   C   + +  +++++ M++K   P+
Sbjct: 666 MCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPD 725

Query: 517 ETTYTILVEGIAHQDE 532
             T+  L + +    E
Sbjct: 726 GYTHRALFKHLEKDHE 741



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 200/456 (43%), Gaps = 48/456 (10%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
           L+    K+ KM++A +    M  SG      S+  L+   CK+G    A  + ++M + G
Sbjct: 315 LINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAG 374

Query: 164 -YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
            YPT T TYN  +R LC  G ++ + + L  +      P+  +Y+ L+    K R    A
Sbjct: 375 IYPT-TSTYNIYIRALCEFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMRKFVEA 429

Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
             L DD+ A    P++V+YN L+ GLC+ G  E A R   ++ S+   P+V++Y  LL+ 
Sbjct: 430 SLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKG 489

Query: 283 LCMEGRWEEANELLAEM-------DG-------------GD----------------RSP 306
               G    A E+  EM       DG             GD                 +P
Sbjct: 490 FVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAP 549

Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
            +  YN+ I  L   G  + A++   ++ +    P   +Y  +I     +G+  +     
Sbjct: 550 DLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLY 609

Query: 367 DQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
           D+M  +R  P+  TY    ++ G    G++++AF     +  +        +  ++  +C
Sbjct: 610 DEMLSKRLSPSVITY--FVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMC 667

Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
           + G   +A++ L +M + G +P+ Y+Y+ LI   C     EE ++++  M + + +PD  
Sbjct: 668 KAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGY 727

Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
              AL   L K   + ++L+      E+ Q P  ++
Sbjct: 728 THRALFKHLEKDHES-MALDSSGKQPEQQQQPRGSS 762



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 42/283 (14%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E M S+   PDV+  T LL    K   +  A ++ + M+  GI PD  +YT       + 
Sbjct: 469 EEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRL 528

Query: 147 GNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           G+   A +L E+M  ED+  P  T+ YN  + GLC +GNL ++++F  ++ + GLVP+  
Sbjct: 529 GDSEKAFRLHEEMVAEDHHAPDLTI-YNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHV 587

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAK-------------------------------- 232
           TY+ ++    ++     A  L D++++K                                
Sbjct: 588 TYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEM 647

Query: 233 ---GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
              G +PN++++N LL G+CK G  +EA R+   +  +G  PN  SY IL+   C   +W
Sbjct: 648 KKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKW 707

Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
           EE  +L  EM   +  P   T+  L      H + DH    LD
Sbjct: 708 EEVVKLYKEMLDKEIEPDGYTHRALFK----HLEKDHESMALD 746



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 8/226 (3%)

Query: 82  AFLQLERMVSKGHK-PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           AF   E MV++ H  PD+      +  LCK   ++KAI+    +   G++PD  +YT ++
Sbjct: 534 AFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVI 593

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
               +KG    A  L ++M       + +TY  L+ G    G L Q+ Q+   + ++G+ 
Sbjct: 594 RGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVR 653

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN  T++ LL    K   +  A + L  +  +G  PN  SY +L++  C   + EE ++ 
Sbjct: 654 PNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKL 713

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
           ++++  K  EP+  ++  L + L      E+ +E +A +D   + P
Sbjct: 714 YKEMLDKEIEPDGYTHRALFKHL------EKDHESMA-LDSSGKQP 752



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 147/359 (40%), Gaps = 45/359 (12%)

Query: 209 LLEAAY--KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC---KEGRTEEAIRFFRD 263
           L+  AY   ER ++  M  +DD++  G    LV+  +L   L    K+   E+ +  F  
Sbjct: 170 LMSEAYLVAERSINLGMHEIDDLLIDGNFDKLVALKLLDLLLWVYTKKSMAEKCLLSFEK 229

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT------------- 310
           +  KGF P+V + NI+LR L       +A E+   M      PT++T             
Sbjct: 230 MIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGD 289

Query: 311 ----------------------YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
                                 YNILI   +  GK + A +   +M +  F  +  S+NP
Sbjct: 290 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNP 349

Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQ 407
           +I   C +G  D      D+M +    P   TYN  +  LC  G++ +A  ++ S+    
Sbjct: 350 LIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPD 409

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
             S    Y  ++    +  K  +A  L  ++      P   TY++LI GLC  G +E A 
Sbjct: 410 VVS----YNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQ 465

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
            +   M      PDV  +  LL G  K+    ++ E++  M+ KG  P+   YT    G
Sbjct: 466 RLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVG 524


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 207/443 (46%), Gaps = 42/443 (9%)

Query: 92  KGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGY 151
           +G++ DV   T LL+ L +A + ++A++  +  + +   P   S+T ++ C C   N G 
Sbjct: 38  EGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGR 97

Query: 152 AMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLE 211
           A + +  M   G P +   YN +++G C LG + ++L    ++                 
Sbjct: 98  AWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM----------------- 140

Query: 212 AAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
                               K  KPN+ +YN ++ GLCK G+ + A+  F  LP    +P
Sbjct: 141 -------------------GKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDP 181

Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
           +  +Y+ L+  LC   R E A ++   M   +       YN +        + D AL+VL
Sbjct: 182 DGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVL 241

Query: 332 DEMVKGRFRPSAASYNPIIARLCS-EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
             M++ R +PS  +YN II  +C  + +++   +   QM    C PN  TY  + + L  
Sbjct: 242 KTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSK 301

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
           + +VQ    + + + +K   SP  + Y  +I +  +  K  +A  +L +  +    PD Y
Sbjct: 302 IYEVQRCLELFKGM-SKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVY 360

Query: 449 TYSSLIRGLCM--EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
            Y++LI G C   +  ++EAL +F  M++    P+V  +N +L GLCK+ R D + ++FQ
Sbjct: 361 MYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQ 420

Query: 507 MMIEKGQMPNETTYTILVEGIAH 529
            M +    PN  T+ ++  G+ H
Sbjct: 421 EMFKVKCSPNRMTFKVMTMGMIH 443



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 188/403 (46%), Gaps = 14/403 (3%)

Query: 152 AMQLVEKMEDY-----GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           ++ L  K  D+     GY  +   Y  L+  L       ++++F  R +     P+ +++
Sbjct: 23  SLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSF 82

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + +++     R    A + L  + + G  P++ +YNV+L G C  GR   A+  F  +  
Sbjct: 83  TIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM-G 141

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
           K  +PNV +YN ++  LC  G+ + A  L   +      P   TY+ L+  L    + + 
Sbjct: 142 KTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEA 201

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
           A+KV D M++  +   A +YN +    C E +VD  ++ L  M  RRCKP+  TYN   +
Sbjct: 202 AIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYN--CI 259

Query: 387 LCGV----GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
           + GV     +++EA+ + Q +           Y  +I  L +  +  +  +L   M+K G
Sbjct: 260 INGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAG 319

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR--RTDL 500
            +PD Y Y SLI        ++EA  I          PDV  +  L+ G C++R  R D 
Sbjct: 320 LSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDE 379

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +L +FQ M ++   PN  TY I++ G+      + + ++ +E+
Sbjct: 380 ALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEM 422



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 178/387 (45%), Gaps = 5/387 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +  +A    +R +    +P +   T ++   C      +A + +  M S GI PD +
Sbjct: 56  RARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVT 115

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  ++   C  G VG A+    KM     P N  TYN+++ GLC  G ++ ++    RL
Sbjct: 116 AYNVVLKGYCDLGRVGRALIKFGKMGKTCKP-NVATYNTVINGLCKFGKIDWAVHLFTRL 174

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
               + P+ FTYS L+    +   + AA+K+ D ++      +  +YN +  G CKE R 
Sbjct: 175 PHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRV 234

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCM-EGRWEEANELLAEMDGGDRSPTIVTYNI 313
           +EA+   + +  +  +P+VV+YN ++  +C  + R EEA  L  +M G D  P  VTY  
Sbjct: 235 DEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGT 294

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           +I  L+   +    L++   M K    P   +Y+ +I       K+D     L       
Sbjct: 295 MILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNH 354

Query: 374 CKPNEGTYNGL-AMLCGVGK--VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
             P+   Y  L +  C   K  V EA  + Q++ +++       Y  V+  LC+ G+  +
Sbjct: 355 VGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDE 414

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGL 457
           A+Q+  EM K   +P+  T+  +  G+
Sbjct: 415 AYQIFQEMFKVKCSPNRMTFKVMTMGM 441



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 16/233 (6%)

Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV---GKVQ 394
           +R     Y  ++  L    +    V+   +     C+P+  ++  +    C V   G+  
Sbjct: 40  YRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAW 99

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT--PDSYTYSS 452
                ++SLG   + +    Y  V+   C  G+  +A   L +  K G T  P+  TY++
Sbjct: 100 RYLGYMRSLGIPPDVTA---YNVVLKGYCDLGRVGRA---LIKFGKMGKTCKPNVATYNT 153

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           +I GLC  G I+ A+ +F  +      PD   ++ L+ GLC++ R + +++V+ MM+E  
Sbjct: 154 VINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEAN 213

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ----VVSESAVERLVMQY 561
              +   Y  + +G   +  ++ + EVLK +  R+    VV+ + +   V QY
Sbjct: 214 YDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQY 266


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 227/508 (44%), Gaps = 62/508 (12%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A    ++M  KG KP+      L+   C+A      I +++ M SSG +P+  +Y  
Sbjct: 169 LENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNT 228

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN-LNQSLQFLDRLIQK 197
           +++ LC +G    A +LVEKM + G   + VT+N  +  LC  G  L  S  F D  I +
Sbjct: 229 VISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDE 288

Query: 198 GL---VPNAFTYSFLLEAAYKE------RGVHAAMK------------------------ 224
            +    PN  TY+ +LE    E      R +  +MK                        
Sbjct: 289 EMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLL 348

Query: 225 ----LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
               +L+++  K  KPNL SYN+L+ GLCK G   +A      +   G  P+ V+Y+ LL
Sbjct: 349 EAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLL 408

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
              C  G+  EAN +L EM      P + T NIL+ SL   G+   A  +L  M +  + 
Sbjct: 409 HGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYG 468

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-----------------------RCKPN 377
               + N +I  LC  G +D  ++ +  M+ R                       +C P+
Sbjct: 469 LDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPD 528

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  LC VG+V EA   +  +  K+ S     +   I + C++GK   AF++L 
Sbjct: 529 SITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLK 588

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G      TY+SLI+GL  E  I E   +   M+E    P+V  +N ++  L +  
Sbjct: 589 EMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGG 648

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +   +  +   M++KG  PN  T+ IL+
Sbjct: 649 KLKDATCLLDEMLQKGISPNIYTFRILI 676



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 210/453 (46%), Gaps = 31/453 (6%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P  S Y  L  C  K+  V   + L + M        T T+N L+  LC +G L  + + 
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHA-AMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            D++ +KG  PN F+   L+   Y   G+H+  + LLD++ + G  PN V+YN +++ LC
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRG-YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLC 234

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----DGGDRS 305
            EG+T EA +    +   G  P++V++N  + +LC  G+  EA+ +  +M    + G   
Sbjct: 235 GEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPK 294

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P  VTYN+++      G  + A  + D M K     S  SYN  +  L   GK+      
Sbjct: 295 PNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLI 353

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L++M  +  KPN  +YN L   LC  G   +A +I+  +     +     Y  ++   CR
Sbjct: 354 LNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCR 413

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +GK  +A  +L EM + G  P+ YT + L+  L  EG   EA ++  +M E  Y  D   
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQ-----------------------MPNETTYT 521
            N ++ GLCK+   D ++E+   M  +G                        +P+  TY 
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            ++ G+     ++ + + L E+  +++  +S +
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLI 566



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 223/480 (46%), Gaps = 30/480 (6%)

Query: 94  HKPDVVQATNLLYDLC-KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           H P  +   NLL+    K +++   I + + M  + + P   ++  L++ LC+ G +  A
Sbjct: 113 HDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENA 172

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            ++ +KM + G   N  +   LVRG C  G  +  +  LD +   G +PN   Y+ ++ +
Sbjct: 173 REVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISS 232

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL---PSKGF 269
              E     A KL++ +   G  P++V++N  +  LCK G+  EA R FRD+      G 
Sbjct: 233 LCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGL 292

Query: 270 -EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +PN V+YN++L   C EG +EEA  +   M   + + ++ +YNI +  L   GK   A 
Sbjct: 293 PKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAH 351

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
            +L+EM +   +P+  SYN ++  LC  G        L  M      P+  TY+ L    
Sbjct: 352 LILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGY 411

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK+ EA  +++ +              ++ SL ++G+  +A  LL  M + G+  D+
Sbjct: 412 CRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDN 471

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVM----------------EEYDYK-------PDVDN 484
            T +++I GLC  G +++A+EI   M                + +D +       PD   
Sbjct: 472 VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSIT 531

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +  ++ GLCK  R D + +    MI K   P+   +   +     Q +L  +  VLKE++
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 211/489 (43%), Gaps = 64/489 (13%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL +A L L  M  K  KP++     L++ LCK      A  ++ +M  SG+ PD  
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 135 SYTYLVNCLCKKGNV-----------------------------------GYAMQLVEKM 159
           +Y+ L++  C++G +                                     A  L++ M
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
            + GY  + VT N+++ GLC  GNL+++++ +  +  +G             A+    G 
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG------------SASLGNLG- 509

Query: 220 HAAMKLLDDIIAKGGK---PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
           ++ + L D  I   GK   P+ ++Y  ++ GLCK GR +EA +   ++  K   P+ + +
Sbjct: 510 NSFIDLFD--IRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIF 567

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           +  + + C +G+   A  +L EM+    + ++ TYN LI  L    +      ++DEM +
Sbjct: 568 DTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKE 627

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGK 392
               P+  +YN II+ L   GK+      LD+M  +   PN  T+          C  G 
Sbjct: 628 RGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGA 687

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            QE F I  SL   + S     Y ++   L   G+T +A +L            ++ Y  
Sbjct: 688 AQELFEIALSLCGHKES----LYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRD 743

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI  LC +G +++A  I   M +  Y  D  +F  ++  L K      + E  + M+E  
Sbjct: 744 LIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME-- 801

Query: 513 QMPNETTYT 521
            M +ET + 
Sbjct: 802 -MASETDFN 809


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 227/508 (44%), Gaps = 62/508 (12%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +A    ++M  KG KP+      L+   C+A      I +++ M SSG +P+  +Y  
Sbjct: 169 LENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNT 228

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN-LNQSLQFLDRLIQK 197
           +++ LC +G    A +LVEKM + G   + VT+N  +  LC  G  L  S  F D  I +
Sbjct: 229 VISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDE 288

Query: 198 GL---VPNAFTYSFLLEAAYKE------RGVHAAMK------------------------ 224
            +    PN  TY+ +LE    E      R +  +MK                        
Sbjct: 289 EMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLL 348

Query: 225 ----LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
               +L+++  K  KPNL SYN+L+ GLCK G   +A      +   G  P+ V+Y+ LL
Sbjct: 349 EAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLL 408

Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
              C  G+  EAN +L EM      P + T NIL+ SL   G+   A  +L  M +  + 
Sbjct: 409 HGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYG 468

Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-----------------------RCKPN 377
               + N +I  LC  G +D  ++ +  M+ R                       +C P+
Sbjct: 469 LDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPD 528

Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
             TY   +  LC VG+V EA   +  +  K+ S     +   I + C++GK   AF++L 
Sbjct: 529 SITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLK 588

Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
           EM K G      TY+SLI+GL  E  I E   +   M+E    P+V  +N ++  L +  
Sbjct: 589 EMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGG 648

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILV 524
           +   +  +   M++KG  PN  T+ IL+
Sbjct: 649 KLKDATCLLDEMLQKGISPNIYTFRILI 676



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 210/453 (46%), Gaps = 31/453 (6%)

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P  S Y  L  C  K+  V   + L + M        T T+N L+  LC +G L  + + 
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHA-AMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
            D++ +KG  PN F+   L+   Y   G+H+  + LLD++ + G  PN V+YN +++ LC
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRG-YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLC 234

Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM----DGGDRS 305
            EG+T EA +    +   G  P++V++N  + +LC  G+  EA+ +  +M    + G   
Sbjct: 235 GEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPK 294

Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
           P  VTYN+++      G  + A  + D M K     S  SYN  +  L   GK+      
Sbjct: 295 PNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLI 353

Query: 366 LDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           L++M  +  KPN  +YN L   LC  G   +A +I+  +     +     Y  ++   CR
Sbjct: 354 LNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCR 413

Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
           +GK  +A  +L EM + G  P+ YT + L+  L  EG   EA ++  +M E  Y  D   
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQ-----------------------MPNETTYT 521
            N ++ GLCK+   D ++E+   M  +G                        +P+  TY 
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533

Query: 522 ILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
            ++ G+     ++ + + L E+  +++  +S +
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLI 566



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 223/480 (46%), Gaps = 30/480 (6%)

Query: 94  HKPDVVQATNLLYDLC-KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           H P  +   NLL+    K +++   I + + M  + + P   ++  L++ LC+ G +  A
Sbjct: 113 HDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENA 172

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
            ++ +KM + G   N  +   LVRG C  G  +  +  LD +   G +PN   Y+ ++ +
Sbjct: 173 REVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISS 232

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL---PSKGF 269
              E     A KL++ +   G  P++V++N  +  LCK G+  EA R FRD+      G 
Sbjct: 233 LCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGL 292

Query: 270 -EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
            +PN V+YN++L   C EG +EEA  +   M   + + ++ +YNI +  L   GK   A 
Sbjct: 293 PKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAH 351

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
            +L+EM +   +P+  SYN ++  LC  G        L  M      P+  TY+ L    
Sbjct: 352 LILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGY 411

Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
           C  GK+ EA  +++ +              ++ SL ++G+  +A  LL  M + G+  D+
Sbjct: 412 CRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDN 471

Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVM----------------EEYDYK-------PDVDN 484
            T +++I GLC  G +++A+EI   M                + +D +       PD   
Sbjct: 472 VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSIT 531

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           +  ++ GLCK  R D + +    MI K   P+   +   +     Q +L  +  VLKE++
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 211/489 (43%), Gaps = 64/489 (13%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL +A L L  M  K  KP++     L++ LCK      A  ++ +M  SG+ PD  
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 135 SYTYLVNCLCKKGNV-----------------------------------GYAMQLVEKM 159
           +Y+ L++  C++G +                                     A  L++ M
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
            + GY  + VT N+++ GLC  GNL+++++ +  +  +G             A+    G 
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG------------SASLGNLG- 509

Query: 220 HAAMKLLDDIIAKGGK---PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
           ++ + L D  I   GK   P+ ++Y  ++ GLCK GR +EA +   ++  K   P+ + +
Sbjct: 510 NSFIDLFD--IRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIF 567

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           +  + + C +G+   A  +L EM+    + ++ TYN LI  L    +      ++DEM +
Sbjct: 568 DTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKE 627

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAMLCGVGK 392
               P+  +YN II+ L   GK+      LD+M  +   PN  T+          C  G 
Sbjct: 628 RGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGA 687

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
            QE F I  SL   + S     Y ++   L   G+T +A +L            ++ Y  
Sbjct: 688 AQELFEIALSLCGHKES----LYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRD 743

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           LI  LC +G +++A  I   M +  Y  D  +F  ++  L K      + E  + M+E  
Sbjct: 744 LIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME-- 801

Query: 513 QMPNETTYT 521
            M +ET + 
Sbjct: 802 -MASETDFN 809


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 203/446 (45%), Gaps = 1/446 (0%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A    + M   G  P +    +LL +L +  +  KA+ V E M++ GI+PD  SYT +VN
Sbjct: 205 ALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVN 264

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             CK+G V  A   V++ME      N VTYNSL+ G   LG++  + + L  + +KG+  
Sbjct: 265 AYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPE 324

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           N+ TY+ L++   K   +  A KL+  ++ K    +   Y VL+   C  GR ++A+R  
Sbjct: 325 NSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIR 384

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
             +   G + N V  N L+   C  G   +A E+L  M   +  P    YN L+      
Sbjct: 385 DAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQ 444

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
                A K+ DEM       +  +YN ++  L   G V+  +   + M  R   PNE TY
Sbjct: 445 EDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTY 504

Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
             L      VG    A  I +   +K  +     Y  +I   C+  K  QA ++  +M +
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            GF PD  TY +LI G C  G + EAL++  + E        + +N+L+ G+ +S     
Sbjct: 565 LGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQK 624

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEG 526
              +   M  +   PN  TY  L+ G
Sbjct: 625 LNGLLAEMKNRELSPNVVTYGSLIAG 650



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 226/539 (41%), Gaps = 75/539 (13%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++DA    + M+  G K + V   +L+   CK   + KA +V+  M    + PD+  Y 
Sbjct: 376 RVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  CK+ +   A +L ++M + G     VTYN+L++ L  +G++  +L   + + ++
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKR 495

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  TY  LL+A +K      AM +  D ++KG   ++  YN ++ G CK  +  +A
Sbjct: 496 GVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQA 555

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA------------------------- 292
              F  +   GF P+ ++Y  L+   C  G   EA                         
Sbjct: 556 QEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITG 615

Query: 293 ----------NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
                     N LLAEM   + SP +VTY  LI      G  D A     +M+     P+
Sbjct: 616 VFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPN 675

Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQS 402
               + I++ L   GK+D     L Q+      P     + + +     +  E   I+ S
Sbjct: 676 IIIGSKIVSSLYRHGKIDEANLILHQI--ADIDPIAAHAHSVELPKSDLRHLETQKIVDS 733

Query: 403 LGNKQNSSPQE---FYKYVITSLCRK---------------------------------- 425
            G K  S P      Y   IT LC+                                   
Sbjct: 734 FGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSA 793

Query: 426 -GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
            GK  +AF L  +M   G  P+   Y++LI GLC  G ++ A  +F  +      P V  
Sbjct: 794 VGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVT 853

Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           +N L+ G CK  RT  +LE+   M E+G  P+  TY+ L+ G+  + + E S  +L E+
Sbjct: 854 YNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 220/521 (42%), Gaps = 62/521 (11%)

Query: 75  RDHKLN-DAFLQLERMVSKGHK--PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
           R+ +LN DA L+  ++ SK  K  PDV     +++ L +A +M K ++V           
Sbjct: 106 RNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRA-RMYKEVRV----------- 153

Query: 132 DASSYTYLVNCLCKKGNVGYAM--QLVEKMEDYGY-PTNTVTYNSLVRGLCMLGNLNQSL 188
               Y   +  LCK   +  A+  +LV    ++ + PT    ++ +++     G    +L
Sbjct: 154 ----YLNELVVLCKNNYIASAVWDELVSVYREFSFSPT---VFDMILKVFAEKGMTKFAL 206

Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
              D + + G VP+  + + LL    +      A+ + + +IA G  P++ SY +++   
Sbjct: 207 CVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAY 266

Query: 249 CKEGRTEEAIRFFRDLPSKGFEPNVVSYN------------------------------- 277
           CKEGR +EA  F +++     EPNVV+YN                               
Sbjct: 267 CKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS 326

Query: 278 ----ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
               +L++  C  G+ E+A +L+  M   +       Y +LI +    G+ D AL++ D 
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGK 392
           M+K   + +    N +I   C  G V+   + L  M     KP+   YN L    C    
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
             +AF +   + NK  +     Y  ++ +L   G    A  +   M K G  P+  TY +
Sbjct: 447 FIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCT 506

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+      G  + A+ I+       +   +  +N ++ G CK  +   + E+F  M E G
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
             P+E TY  L++G      L + A  LK++  R  +S S 
Sbjct: 567 FPPDEITYRTLIDGYCKVGNL-VEALKLKDMSERDGISSST 606



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 139/302 (46%), Gaps = 37/302 (12%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  M ++   P+VV   +L+   C    M KA      M+  GI P+    + +V+ L +
Sbjct: 629 LAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYR 688

Query: 146 KGNVGYAMQLVEKMED-----------------------------YGYP------TNTVT 170
            G +  A  ++ ++ D                             +G        +N + 
Sbjct: 689 HGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIV 748

Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           YN  + GLC   N++   + L  L+ KG  P+ +TY  L+ A      V+ A  L DD+I
Sbjct: 749 YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMI 808

Query: 231 AKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWE 290
             G  PN+V YN L+ GLCK G  + A R F  L  KG  P VV+YN L+   C  GR  
Sbjct: 809 NAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTT 868

Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
           EA EL  +M      P+ +TY+ LI  L   GK++ ++ +L+EM+K      ++  +P++
Sbjct: 869 EALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKA--GKGSSVMDPLV 926

Query: 351 AR 352
           AR
Sbjct: 927 AR 928



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 11/208 (5%)

Query: 33  HSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNNNDTRH-------RDHKLNDAFLQ 85
           HS  L K  +R L + ++     DS   K    P +NN   +       +   ++D    
Sbjct: 713 HSVELPKSDLRHLETQKIV----DSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRI 768

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  ++ KG  PD     +L++      K+ +A  + + M+++G++P+   Y  L+N LCK
Sbjct: 769 LSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCK 828

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            GN+  A +L  K+   G     VTYN+L+ G C  G   ++L+  D++ ++G+ P++ T
Sbjct: 829 SGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSIT 888

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           YS L+   Y E     ++ LL++++  G
Sbjct: 889 YSTLIHGLYMEGKSEQSVGLLNEMMKAG 916


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 202/440 (45%), Gaps = 41/440 (9%)

Query: 97  DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
           D      ++ +LC   K++ A+ +   M+  G+IPD  ++ YLVN LCK G++  A  LV
Sbjct: 130 DYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLV 189

Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
            +M + G   N  T+N+ ++G C+  N++++L     +   G+ PN  TY+ L+ A  K+
Sbjct: 190 REMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKK 249

Query: 217 RGVHAAMKLL--------------------------------------DDIIAKGGKPNL 238
             +  A KLL                                      D+++ +G + ++
Sbjct: 250 GLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDV 309

Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
           V+YNVL+ G C       A R+F ++  +G  P++ +YN L+   C  G  +EA  +   
Sbjct: 310 VAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGV 369

Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
           M     +P +++Y ++I  L  HG    A + L  M++    P    +N +I      G 
Sbjct: 370 MSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGD 429

Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGL--AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
           +   +   DQM      PN  TYN L  A + G G + +A +I + +           Y 
Sbjct: 430 LSNALSIRDQMVSFGIPPNVFTYNALIHAQIKG-GNIVDAHSIKKEMLLNGIYPDVVTYN 488

Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
            +I + C  G+ + A +L  EM + G+ PD  TY+ LIRG C+ G + EA E+   ++  
Sbjct: 489 LLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRS 548

Query: 477 DYKPDVDNFNALLLGLCKSR 496
               D   F  L+   C++R
Sbjct: 549 GLSIDHAPFQILIQKYCRTR 568



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 197/428 (46%), Gaps = 41/428 (9%)

Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
           +++R LC+ G L  +L   +++IQKG++P+  T+++L+    K   +  A  L+ +++  
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195

Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
           G  PN  ++N  + G C     ++A+  F  + + G  PN V+YNIL+ +LC +G  ++A
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255

Query: 293 NELLAEM---DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
            +LL ++   D G  +  I+T  I +      G    AL   DEM++   +    +YN +
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVL 315

Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQN 408
           I   C    ++   +   +MF R   P+  TYN L +  C +G + EA   I  + +K  
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEA-CYIHGVMSKMG 374

Query: 409 SSPQEF-YKYVITSLCRKGKTYQAFQLLY------------------------------- 436
           ++P    YK +I  LC  G   +A Q L                                
Sbjct: 375 AAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNAL 434

Query: 437 ----EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
               +M  +G  P+ +TY++LI      G I +A  I   M      PDV  +N L+   
Sbjct: 435 SIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAA 494

Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
           C   R   +L ++  M+ +G  P+  TYT L+ G   +  +  + E+L +LQ   +  + 
Sbjct: 495 CNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDH 554

Query: 553 AVERLVMQ 560
           A  ++++Q
Sbjct: 555 APFQILIQ 562



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 166/396 (41%), Gaps = 43/396 (10%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           +  M+  G  P+       +   C  N + KA+ +   M +SGI P+  +Y  L++ LCK
Sbjct: 189 VREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCK 248

Query: 146 KGNVGYAMQLVEKMED--------------------------------------YGYPTN 167
           KG +  A +L+EK+ D                                       G   +
Sbjct: 249 KGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQID 308

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
            V YN L+ G C++ ++N + ++   + ++GL+P+ FTY+ L+    K   +  A  +  
Sbjct: 309 VVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHG 368

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            +   G  P+L+SY +++ GLC  G    A +F   +      P  + +N+++      G
Sbjct: 369 VMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHG 428

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
               A  +  +M      P + TYN LI +    G    A  +  EM+     P   +YN
Sbjct: 429 DLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYN 488

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNK 406
            +I   C+ G++   ++  D+M  R  +P+  TY  L    C  G V EA  ++  L   
Sbjct: 489 LLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRS 548

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
             S     ++ +I   CR     +A    Y++TK G
Sbjct: 549 GLSIDHAPFQILIQKYCRTRVPGRA----YDLTKLG 580



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 35/269 (13%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A +  + M+ +G + DVV    L++  C    M  A +    M   G++PD  +Y  L++
Sbjct: 293 ALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLIS 352

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL---------- 191
             CK GN+  A  +   M   G   + ++Y  +++GLC+ G++ ++ QFL          
Sbjct: 353 GFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVP 412

Query: 192 -------------------------DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
                                    D+++  G+ PN FTY+ L+ A  K   +  A  + 
Sbjct: 413 EPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIK 472

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
            +++  G  P++V+YN+L+   C  GR   A+R + ++  +G+EP++++Y  L+R  C+ 
Sbjct: 473 KEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIR 532

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILI 315
           G   EA ELLA++     S     + ILI
Sbjct: 533 GHVMEAEELLAKLQRSGLSIDHAPFQILI 561



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 76/147 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   R   L++A    ++MVS G  P+V     L++   K   +  A  + + M+ +GI 
Sbjct: 422 DGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIY 481

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  +Y  L+   C  G + +A++L ++M   GY  + +TY  L+RG C+ G++ ++ + 
Sbjct: 482 PDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEEL 541

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKER 217
           L +L + GL  +   +  L++   + R
Sbjct: 542 LAKLQRSGLSIDHAPFQILIQKYCRTR 568


>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Brachypodium distachyon]
          Length = 460

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 208/437 (47%), Gaps = 38/437 (8%)

Query: 105 LYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY 164
           L  LC++  +++A  V+   +  G+ PD  +Y  L+   C+   +     ++ +M + G 
Sbjct: 17  LAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMREAGV 76

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
             N VTYNSL+     +G   ++L   D +++ G+ P+A++Y+ L+   ++      A +
Sbjct: 77  WPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPEDAYR 136

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +  D+  KG  P   +YN LL GL K G    A R FR L   G    +V+YN ++  LC
Sbjct: 137 VFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMINGLC 196

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G+   A  +L E+   + +P  VTY  ++     +G+ D  L+    +++G   P   
Sbjct: 197 RSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVF 256

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLG 404
            Y  +I+ L  +G+V+                    Y+ L              +IQS G
Sbjct: 257 PYCTVISALVKKGRVE----------------EANAYSEL--------------MIQS-G 285

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
           ++ +++    Y  +I   C++GK   AF+LL  M + G   D YT+S L+ GLC  G IE
Sbjct: 286 SRLDTAC---YNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKLGHIE 342

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            A +    ME  D + +V  +N L+  LCKS + D ++ +   M    ++ ++ TYT LV
Sbjct: 343 AAEKQLCYMEMRDMESNVVAYNCLVDALCKSDQVDAAIRLLHDM----KLKDDFTYTSLV 398

Query: 525 EGIAHQDELELSAEVLK 541
            G+       ++++ L+
Sbjct: 399 HGLCRVGRYHMASKFLR 415



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 171/370 (46%), Gaps = 5/370 (1%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G  PDVV    LL   C+A  +     V+  M  +G+ P+A +Y  L+    + G    A
Sbjct: 40  GMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMREAGVWPNAVTYNSLIVAASRVGLTMRA 99

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
           + L ++M   G   +  +YN L+  L   G+   + +    + +KG+ P   TY+ LL+ 
Sbjct: 100 LDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDG 159

Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
            +K      A ++   +   G    +V+YN ++ GLC+ G+   A    R+L      PN
Sbjct: 160 LFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTPN 219

Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
            V+Y  +++     GR+++  E    +  G   P +  Y  +I +L   G+ + A    +
Sbjct: 220 AVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEANAYSE 279

Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVG 391
            M++   R   A YN +I   C EGK+D   + L  M     + +E T++ L   LC +G
Sbjct: 280 LMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKLG 339

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
            ++ A   +  +  +   S    Y  ++ +LC+  +   A +LL++M       D +TY+
Sbjct: 340 HIEAAEKQLCYMEMRDMESNVVAYNCLVDALCKSDQVDAAIRLLHDMK----LKDDFTYT 395

Query: 452 SLIRGLCMEG 461
           SL+ GLC  G
Sbjct: 396 SLVHGLCRVG 405



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 167/384 (43%), Gaps = 34/384 (8%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           +T   N  +  LC  G+L ++   L   I  G+ P+  TY+ LL A  +  G+ A   +L
Sbjct: 9   STRLMNVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFAVL 68

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             +   G  PN V+YN L+    + G T  A+  F ++   G  P+  SYN+L+  L   
Sbjct: 69  RRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRS 128

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASY 346
           G  E+A  + A+M     +P   TYN L+  L   G   +A ++   + +        +Y
Sbjct: 129 GHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGIVTY 188

Query: 347 NPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK 406
           N +I                               NGL   C  GKV  A  I++ LG  
Sbjct: 189 NTMI-------------------------------NGL---CRSGKVGYARMILRELGRT 214

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
           +++     Y  V+    R G+  Q  +    + + G  PD + Y ++I  L  +G +EEA
Sbjct: 215 EHTPNAVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEA 274

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
                +M +   + D   +N L+   C+  + D + E+  MM E G   +E T++ILV G
Sbjct: 275 NAYSELMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNG 334

Query: 527 IAHQDELELSAEVLKELQLRQVVS 550
           +     +E + + L  +++R + S
Sbjct: 335 LCKLGHIEAAEKQLCYMEMRDMES 358



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 155/338 (45%), Gaps = 5/338 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
            + M+  G  PD      L++ L ++   + A +V   M   G+ P  ++Y  L++ L K
Sbjct: 103 FDEMLRAGIAPDAWSYNVLMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFK 162

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G+   A ++   ++  G P   VTYN+++ GLC  G +  +   L  L +    PNA T
Sbjct: 163 AGHATNAYRMFRYLQRVGLPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTPNAVT 222

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ +++  ++       ++    ++  G  P++  Y  +++ L K+GR EEA  +   + 
Sbjct: 223 YTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVFPYCTVISALVKKGRVEEANAYSELMI 282

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G   +   YN L+   C EG+ ++A ELL+ M+ G       T++IL+  L   G  +
Sbjct: 283 QSGSRLDTACYNTLIHLRCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKLGHIE 342

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            A K L  M       +  +YN ++  LC   +VD  ++ L  M  +    ++ TY  L 
Sbjct: 343 AAEKQLCYMEMRDMESNVVAYNCLVDALCKSDQVDAAIRLLHDMKLK----DDFTYTSLV 398

Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
             LC VG+   A   ++    + N+      + VI  L
Sbjct: 399 HGLCRVGRYHMASKFLRICLREGNNVLASAKRAVIAGL 436



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 6/287 (2%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA+     M  KG  P       LL  L KA     A ++   +   G+     +Y  ++
Sbjct: 133 DAYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGIVTYNTMI 192

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           N LC+ G VGYA  ++ ++    +  N VTY ++++     G  +Q L+    L++ G +
Sbjct: 193 NGLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHI 252

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           P+ F Y  ++ A  K+  V  A    + +I  G + +   YN L+   C+EG+ ++A   
Sbjct: 253 PDVFPYCTVISALVKKGRVEEANAYSELMIQSGSRLDTACYNTLIHLRCQEGKLDDAFEL 312

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
              +   G E +  +++IL+  LC  G  E A + L  M+  D    +V YN L+ +L  
Sbjct: 313 LSMMEEGGLESDEYTFSILVNGLCKLGHIEAAEKQLCYMEMRDMESNVVAYNCLVDALCK 372

Query: 321 HGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
             + D A+++L +M +K  F     +Y  ++  LC  G+  +  K L
Sbjct: 373 SDQVDAAIRLLHDMKLKDDF-----TYTSLVHGLCRVGRYHMASKFL 414



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 4/222 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  K+  A + L  +    H P+ V  T ++    +  +  + ++    ++  G IPD  
Sbjct: 197 RSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGLETFLSLLEGGHIPDVF 256

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  +++ L KKG V  A    E M   G   +T  YN+L+   C  G L+ + + L  +
Sbjct: 257 PYCTVISALVKKGRVEEANAYSELMIQSGSRLDTACYNTLIHLRCQEGKLDDAFELLSMM 316

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            + GL  + +T+S L+    K   + AA K L  +  +  + N+V+YN L+  LCK  + 
Sbjct: 317 EEGGLESDEYTFSILVNGLCKLGHIEAAEKQLCYMEMRDMESNVVAYNCLVDALCKSDQV 376

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
           + AIR   D+  K    +  +Y  L+  LC  GR+  A++ L
Sbjct: 377 DAAIRLLHDMKLK----DDFTYTSLVHGLCRVGRYHMASKFL 414



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 1/232 (0%)

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGK 392
           M + R + S    N  +A LC  G ++     L         P+  TYN L A  C    
Sbjct: 1   MARARAQLSTRLMNVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAG 60

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           +   FA+++ +           Y  +I +  R G T +A  L  EM + G  PD+++Y+ 
Sbjct: 61  LDAGFAVLRRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNV 120

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           L+  L   G  E+A  +F  M E    P    +N LL GL K+     +  +F+ +   G
Sbjct: 121 LMHCLFRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVG 180

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
                 TY  ++ G+    ++  +  +L+EL   +    +     VM+  F 
Sbjct: 181 LPVGIVTYNTMINGLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFR 232



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 73  RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
           R ++ KL+DAF  L  M   G + D    + L+  LCK   ++ A K +  M    +  +
Sbjct: 300 RCQEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKLGHIEAAEKQLCYMEMRDMESN 359

Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
             +Y  LV+ LCK   V  A++L+  M+      +  TY SLV GLC +G  + + +FL 
Sbjct: 360 VVAYNCLVDALCKSDQVDAAIRLLHDMK----LKDDFTYTSLVHGLCRVGRYHMASKFLR 415

Query: 193 RLIQKG 198
             +++G
Sbjct: 416 ICLREG 421


>gi|357129239|ref|XP_003566273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 550

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 191/388 (49%), Gaps = 5/388 (1%)

Query: 95  KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC-LCKKGNVGYAM 153
           +PD    T +   L  A++   A+ V+E M + G+ PD  + T LV    C+      A 
Sbjct: 96  RPDAACFTTVAAALSSASRPGAALAVLEAMAADGVAPDTVACTVLVGVYACRLQQFDAAY 155

Query: 154 QLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAA 213
           ++V  M D G   + VTY++L+ GLC    + ++L  LD ++++G  PNA TY+ ++ A 
Sbjct: 156 EVVRWMTDNGVAPDVVTYSTLICGLCRAQRVAEALGVLDLMLEEGCHPNAHTYTPIMHAY 215

Query: 214 YKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNV 273
                +H A KLLD +IA G  P+  +YNVL+  L K G  EE      +  SKG+ P+ 
Sbjct: 216 CTTGMIHEAKKLLDSMIAAGCAPSTATYNVLIEALSKVGAFEEVDVLLEESTSKGWIPDT 275

Query: 274 VSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDE 333
           ++Y+  +  LC  GR +++  L+  M      P  VT NIL+  +        A  +L+ 
Sbjct: 276 ITYSTYMDGLCRSGRVDKSFALVDRMLSNGLHPNEVTLNILLNGVCRSLTAWAAKCLLEC 335

Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGK 392
             +  +  S  +YN ++ RLC E +   VVK    M  +   PN  T N +   LC +GK
Sbjct: 336 SAELGWDASVINYNTVMRRLCDERRWLAVVKLFTDMSKKGIAPNSWTLNIVVHSLCKLGK 395

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           ++ A  +   +G+++  +    Y  +I  L   GK  + + LL++M + G  P+  TYS 
Sbjct: 396 LRNALCL---MGSEEFVANAITYNTLIHHLSLSGKANEVYLLLHDMIEEGIAPNETTYSL 452

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKP 480
           +I  LC E     AL  F    E  + P
Sbjct: 453 VIDCLCREEKFSVALSCFYRSCEDGFSP 480



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 190/420 (45%), Gaps = 39/420 (9%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  + + A+  +  M   G  PDVV  + L+  LC+A ++ +A+ V+++M+  G  P+A 
Sbjct: 147 RLQQFDAAYEVVRWMTDNGVAPDVVTYSTLICGLCRAQRVAEALGVLDLMLEEGCHPNAH 206

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT +++  C  G +  A +L++ M   G   +T TYN L+  L  +G   +    L+  
Sbjct: 207 TYTPIMHAYCTTGMIHEAKKLLDSMIAAGCAPSTATYNVLIEALSKVGAFEEVDVLLEES 266

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             KG +P+  TYS  ++   +   V  +  L+D +++ G  PN V+ N+LL G+C+    
Sbjct: 267 TSKGWIPDTITYSTYMDGLCRSGRVDKSFALVDRMLSNGLHPNEVTLNILLNGVCRSLTA 326

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
             A          G++ +V++YN ++R LC E RW    +L  +M     +P   T NI+
Sbjct: 327 WAAKCLLECSAELGWDASVINYNTVMRRLCDERRWLAVVKLFTDMSKKGIAPNSWTLNIV 386

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           + SL   GK  +AL +   M    F  +A +YN +I  L   GK + V   L  M     
Sbjct: 387 VHSLCKLGKLRNALCL---MGSEEFVANAITYNTLIHHLSLSGKANEVYLLLHDMIEEGI 443

Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
            PNE TY+                                   VI  LCR+ K   A   
Sbjct: 444 APNETTYS----------------------------------LVIDCLCREEKFSVALSC 469

Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
            Y   + GF+P +   SS++RGL   G + E   +   +    +  DV  +  +++  CK
Sbjct: 470 FYRSCEDGFSPSA--VSSIVRGLINGGKLGELHNLIGWILGQGFAIDVYMYREVIIAFCK 527



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 180/382 (47%), Gaps = 29/382 (7%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  ++ +A   L+ M+ +G  P+    T +++  C    + +A K+++ M+++G  P  +
Sbjct: 182 RAQRVAEALGVLDLMLEEGCHPNAHTYTPIMHAYCTTGMIHEAKKLLDSMIAAGCAPSTA 241

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y  L+  L K G       L+E+    G+  +T+TY++ + GLC  G +++S   +DR+
Sbjct: 242 TYNVLIEALSKVGAFEEVDVLLEESTSKGWIPDTITYSTYMDGLCRSGRVDKSFALVDRM 301

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +  GL PN  T + LL    +     AA  LL+     G   ++++YN ++  LC E R 
Sbjct: 302 LSNGLHPNEVTLNILLNGVCRSLTAWAAKCLLECSAELGWDASVINYNTVMRRLCDERRW 361

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
              ++ F D+  KG  PN  + NI++ SLC  G+   A   L  M   +     +TYN L
Sbjct: 362 LAVVKLFTDMSKKGIAPNSWTLNIVVHSLCKLGKLRNA---LCLMGSEEFVANAITYNTL 418

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I  L+  GK +    +L +M++    P+  +Y+ +I  LC E K  + + C    F+R C
Sbjct: 419 IHHLSLSGKANEVYLLLHDMIEEGIAPNETTYSLVIDCLCREEKFSVALSC----FYRSC 474

Query: 375 KPN----------EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
           +             G  NG       GK+ E   +I  +  +  +     Y+ VI + C+
Sbjct: 475 EDGFSPSAVSSIVRGLING-------GKLGELHNLIGWILGQGFAIDVYMYREVIIAFCK 527

Query: 425 KG-----KTYQAFQLLYEMTKY 441
           KG     + Y+   +L  M  +
Sbjct: 528 KGYCQGKEMYKVCHVLERMLSF 549



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 185/390 (47%), Gaps = 10/390 (2%)

Query: 152 AMQLVEKMEDY-GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
           A+QL+++M        +   + ++   L        +L  L+ +   G+ P+    + L+
Sbjct: 82  ALQLLDEMRSLLQRRPDAACFTTVAAALSSASRPGAALAVLEAMAADGVAPDTVACTVLV 141

Query: 211 EA-AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF 269
              A + +   AA +++  +   G  P++V+Y+ L+ GLC+  R  EA+     +  +G 
Sbjct: 142 GVYACRLQQFDAAYEVVRWMTDNGVAPDVVTYSTLICGLCRAQRVAEALGVLDLMLEEGC 201

Query: 270 EPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALK 329
            PN  +Y  ++ + C  G   EA +LL  M     +P+  TYN+LI +L+  G  +    
Sbjct: 202 HPNAHTYTPIMHAYCTTGMIHEAKKLLDSMIAAGCAPSTATYNVLIEALSKVGAFEEVDV 261

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
           +L+E     + P   +Y+  +  LC  G+VD     +D+M      PNE T N   +L G
Sbjct: 262 LLEESTSKGWIPDTITYSTYMDGLCRSGRVDKSFALVDRMLSNGLHPNEVTLN--ILLNG 319

Query: 390 VGKVQEAFA---IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
           V +   A+A   +++        +    Y  V+  LC + +     +L  +M+K G  P+
Sbjct: 320 VCRSLTAWAAKCLLECSAELGWDASVINYNTVMRRLCDERRWLAVVKLFTDMSKKGIAPN 379

Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           S+T + ++  LC  G +  AL    +M   ++  +   +N L+  L  S + +    +  
Sbjct: 380 SWTLNIVVHSLCKLGKLRNAL---CLMGSEEFVANAITYNTLIHHLSLSGKANEVYLLLH 436

Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELS 536
            MIE+G  PNETTY+++++ +  +++  ++
Sbjct: 437 DMIEEGIAPNETTYSLVIDCLCREEKFSVA 466



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 112/280 (40%), Gaps = 48/280 (17%)

Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH-GKTDHALK 329
           P+   +  +  +L    R   A  +L  M     +P  V   +L+G  A    + D A +
Sbjct: 97  PDAACFTTVAAALSSASRPGAALAVLEAMAADGVAPDTVACTVLVGVYACRLQQFDAAYE 156

Query: 330 VLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG 389
           V+  M      P   +Y+ +I  LC   +V   +  LD M    C PN  TY        
Sbjct: 157 VVRWMTDNGVAPDVVTYSTLICGLCRAQRVAEALGVLDLMLEEGCHPNAHTY-------- 208

Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
                               +P      ++ + C  G  ++A +LL  M   G  P + T
Sbjct: 209 --------------------TP------IMHAYCTTGMIHEAKKLLDSMIAAGCAPSTAT 242

Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYK---PDVDNFNALLLGLCKSRRTDLSLEVFQ 506
           Y+ LI  L   G  EE   + V++EE   K   PD   ++  + GLC+S R D S  +  
Sbjct: 243 YNVLIEALSKVGAFEE---VDVLLEESTSKGWIPDTITYSTYMDGLCRSGRVDKSFALVD 299

Query: 507 MMIEKGQMPNETTYTILVEGI-------AHQDELELSAEV 539
            M+  G  PNE T  IL+ G+       A +  LE SAE+
Sbjct: 300 RMLSNGLHPNEVTLNILLNGVCRSLTAWAAKCLLECSAEL 339



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 9/189 (4%)

Query: 360 DLVVKCLDQM---FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
           D  ++ LD+M     RR  P+   +  +A  L    +   A A+++++      +P    
Sbjct: 80  DRALQLLDEMRSLLQRR--PDAACFTTVAAALSSASRPGAALAVLEAMA-ADGVAPDTVA 136

Query: 416 KYVITSL--CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
             V+  +  CR  +   A++++  MT  G  PD  TYS+LI GLC    + EAL +  +M
Sbjct: 137 CTVLVGVYACRLQQFDAAYEVVRWMTDNGVAPDVVTYSTLICGLCRAQRVAEALGVLDLM 196

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
            E    P+   +  ++   C +     + ++   MI  G  P+  TY +L+E ++     
Sbjct: 197 LEEGCHPNAHTYTPIMHAYCTTGMIHEAKKLLDSMIAAGCAPSTATYNVLIEALSKVGAF 256

Query: 534 ELSAEVLKE 542
           E    +L+E
Sbjct: 257 EEVDVLLEE 265


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/522 (23%), Positives = 242/522 (46%), Gaps = 42/522 (8%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           D F ++  +   G +P +     LL    +A +  K   +     ++G+ P+  +Y  L+
Sbjct: 99  DVFKRMREIF--GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
              CKK     A   ++ M   G+  +  +Y++++  L   G L+ +L+  D + ++G+ 
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIR 259
           P+   Y+ L++   KE+    AM+L D ++      PN+ ++N++++GL K GR ++ ++
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
            +  +     E ++ +Y+ L+  LC  G  ++A  +  E+D    S  +VTYN ++G   
Sbjct: 277 IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC 336

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             GK   +L+ L  +++ +   +  SYN +I  L   GK+D        M  +    ++ 
Sbjct: 337 RCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKT 395

Query: 380 TYNGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
           TY G+ +  LC  G V +A  ++Q + +         Y  +I  LC+K +  +A  L+ E
Sbjct: 396 TY-GIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454

Query: 438 MTKYGFTPDSY-----------------------------------TYSSLIRGLCMEGL 462
           M+K+G   +S+                                   +Y+ LI GLC  G 
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514

Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
             EA      M E  +KPD+  ++ LL GLC+ R+ DL+LE++   ++ G   +   + I
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574

Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
           L+ G+    +L+ +  V+  ++ R   +       +M+  F+
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 223/517 (43%), Gaps = 73/517 (14%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L+ M  +G KPDV   + ++ DL KA K+  A+++ + M   G+ PD + Y  L++   K
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231

Query: 146 KGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           + +   AM+L +++ ED     N  T+N ++ GL   G ++  L+  +R+ Q     + +
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291

Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
           TYS L+        V  A  + +++  +    ++V+YN +L G C+ G+ +E++  +R +
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
             K    N+VSYNIL++ L   G+ +EA  +   M     +    TY I I  L  +G  
Sbjct: 352 EHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM--------------- 369
           + AL V+ E+          +Y  II  LC + +++     + +M               
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470

Query: 370 ---------------FHRR-----CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQN 408
                          F R      C+P   +YN L   LC  GK  EA A ++ +     
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
               + Y  ++  LCR  K   A +L ++  + G   D   ++ LI GLC  G +++A+ 
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590

Query: 469 IFVVMEE-------------------------------YDYK----PDVDNFNALLLGLC 493
           +   ME                                Y YK    PD+ ++N ++ GLC
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
             R    ++E F      G  P   T+ ILV  + ++
Sbjct: 651 MCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 153/307 (49%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           K+++A +    M +KG+  D       ++ LC    + KA+ VM+ + SSG   D  +Y 
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++CLCKK  +  A  LV++M  +G   N+   N+L+ GL     L ++  FL  + + 
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G  P   +Y+ L+    K      A   + +++  G KP+L +Y++LL GLC++ + + A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
           +  +      G E +V+ +NIL+  LC  G+ ++A  ++A M+  + +  +VTYN L+  
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G ++ A  +   M K   +P   SYN I+  LC    V   ++  D   +    P 
Sbjct: 614 FFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPT 673

Query: 378 EGTYNGL 384
             T+N L
Sbjct: 674 VYTWNIL 680



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 152/318 (47%), Gaps = 4/318 (1%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCL 143
           L+L R++   +  ++V    L+  L +  K+ +A  +  +M + G   D ++Y   ++ L
Sbjct: 345 LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404

Query: 144 CKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
           C  G V  A+ +++++E  G   +   Y S++  LC    L ++   +  + + G+  N+
Sbjct: 405 CVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464

Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
              + L+    ++  +  A   L ++   G +P +VSYN+L+ GLCK G+  EA  F ++
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +   G++P++ +Y+ILL  LC + + + A EL  +         ++ +NILI  L   GK
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN- 382
            D A+ V+  M       +  +YN ++      G  +        M+    +P+  +YN 
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644

Query: 383 ---GLAMLCGVGKVQEAF 397
              GL M  GV    E F
Sbjct: 645 IMKGLCMCRGVSYAMEFF 662



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 168/350 (48%), Gaps = 10/350 (2%)

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL-VSYNVLLTGLCKEGRTEE 256
           G   +A  Y  +L    + R V+   ++++ I ++  K +  V+ +V+ T   K    ++
Sbjct: 38  GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKT-YGKNSMPDQ 96

Query: 257 AIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           A+  F+ +    G EP + SYN LL +     +W +   L A  +    +P + TYN+LI
Sbjct: 97  ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                  + + A   LD M K  F+P   SY+ +I  L   GK+D  ++  D+M  R   
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216

Query: 376 PNEGTYNGLAMLCGVGKVQE---AFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQA 431
           P+   YN   ++ G  K ++   A  +   L    +  P  + +  +I+ L + G+    
Sbjct: 217 PDVTCYN--ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            ++   M +     D YTYSSLI GLC  G +++A  +F  ++E     DV  +N +L G
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
            C+  +   SLE++++M  K  + N  +Y IL++G+    +++ +  + +
Sbjct: 335 FCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWR 383



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 109/209 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           RD +L +A   L  M   G +P VV    L+  LCKA K  +A   ++ M+ +G  PD  
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+  LC+   +  A++L  +    G  T+ + +N L+ GLC +G L+ ++  +  +
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
             +    N  TY+ L+E  +K    + A  +   +   G +P+++SYN ++ GLC     
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
             A+ FF D  + G  P V ++NIL+R++
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILVRAV 684


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 179/359 (49%), Gaps = 6/359 (1%)

Query: 104 LLYDLCKANKMKKAIKVMEMMVS-SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKM-ED 161
           +L  LC+  ++ +A++  +  +  +   PD  SYT L+N LCK G V  A  L  KM   
Sbjct: 16  ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75

Query: 162 YGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
            G   N  TYN+LV GLC    L+ +   +    ++   P+  TY+ L+ A ++   V  
Sbjct: 76  GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDE 135

Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
           A+     +  +G  P LVS+N ++TGLC+  R  +A+  F ++  + F PN+V+Y++++ 
Sbjct: 136 ALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVID 195

Query: 282 SLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRP 341
            LC   + +EA +LL  M      P +V Y  L+   +  G+ D AL +L  MV     P
Sbjct: 196 GLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIP 255

Query: 342 SAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAII 400
              +Y  +I +LC  G+VD   +   ++   +C PN  TY+ L    C   +V E   ++
Sbjct: 256 DVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM 315

Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
           + +  + N      Y  +I  L    +  +A+ +  EM++ GF PD+ TY  L R L M
Sbjct: 316 REMACRPNVVT---YNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRM 371



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 159 MEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKER 217
           M+  G   N  T + +++GLC  G + Q+L+  D  ++     P+  +Y+ L+    K  
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 218 GVHAAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
            V AA  L   ++A GG +PN  +YN L+ GLCK+ R + A     +   + F P+VV+Y
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
           N L+ +L   GR +EA     +M      PT+V++N +I  L    +   AL+V +EM+ 
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180

Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQE 395
             F P+  +Y+ +I  LC   ++D   + LD+M    C+P+   Y  L +     G++  
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 240

Query: 396 AFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIR 455
           A  +++ + ++        Y  VI  LC+ G+   A ++  E+     +P+  TYS+LI 
Sbjct: 241 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 300

Query: 456 GLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
           G C    ++E  +   VM E   +P+V  +N ++ GL    R + +  +F+ M E G +P
Sbjct: 301 GYCRASRVDEGGK---VMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 357

Query: 516 NETTY 520
           +  TY
Sbjct: 358 DARTY 362



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 179/349 (51%), Gaps = 6/349 (1%)

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG-LV 200
           LC+ G V  A++  +   +  +   + V+Y +L+ GLC LG ++ +     +++  G   
Sbjct: 20  LCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCR 79

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PNAFTY+ L++   K+  + AA  ++ +   +   P++V+YN L+  L + GR +EA+  
Sbjct: 80  PNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALAT 139

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F  +  +G+ P +VS+N ++  LC   R  +A E+  EM   D  P +VTY+++I  L  
Sbjct: 140 FTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 199

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
             + D A ++LD MV    RP   +Y P++    + G++D  +  L +M  + C P+  T
Sbjct: 200 SDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVT 259

Query: 381 YNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           Y   +  LC VG+V +A  I + L   + S     Y  +I   CR  +  +  +++ EM 
Sbjct: 260 YTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM- 318

Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
                P+  TY+++I GL M    EEA  +F  M E  + PD   +  L
Sbjct: 319 --ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 156/308 (50%), Gaps = 4/308 (1%)

Query: 78  KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           +++ AF    +MV+ G  +P+      L+  LCK +++  A  V+         PD  +Y
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
             L+  L + G V  A+    +M + GY    V++N+++ GLC    L  +L+  + +I 
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
           +   PN  TYS +++   K   +  A +LLD ++++G +P+LV+Y  L+ G    GR + 
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 240

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A+   R + S+G  P+VV+Y +++  LC  GR ++A+E+  E+     SP +VTY+ LIG
Sbjct: 241 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 300

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
                 + D   KV+ EM     RP+  +YN +I  L    + +       +M      P
Sbjct: 301 GYCRASRVDEGGKVMREMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 357

Query: 377 NEGTYNGL 384
           +  TY GL
Sbjct: 358 DARTYRGL 365



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 142/280 (50%), Gaps = 3/280 (1%)

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELL-AEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
           +G + N  + +I+L+ LC  GR  +A E   A ++     P +V+Y  LI  L   G+ D
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63

Query: 326 HALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
            A  +  +MV  G  RP+A +YN ++  LC + ++D     + +   R   P+  TYN L
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 385 -AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
            A L  +G+V EA A    +  +        +  +IT LCR  +   A ++  EM    F
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            P+  TYS +I GLC    ++EA ++   M     +PD+  +  L+LG   + R D +L 
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
           + + M+ +G +P+  TYT++++ +     ++ + E+ +EL
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFREL 283



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 128/251 (50%), Gaps = 3/251 (1%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A     +M  +G+ P +V    ++  LC+A ++  A++V   M+     P+  +Y+
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 191

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            +++ LCK   +  A QL+++M   G   + V Y  LV G    G L+ +L  L R++ +
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 251

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G +P+  TY+ +++   K   V  A ++  +++A    PN+V+Y+ L+ G C+  R +E 
Sbjct: 252 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG 311

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
            +  R++  +   PNVV+YN ++  L M  R EEA  +  EM      P   TY  L  +
Sbjct: 312 GKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRA 368

Query: 318 LAYHGKTDHAL 328
           L       H L
Sbjct: 369 LRMIDHPPHVL 379



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 3/211 (1%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  +L DA      M+ +   P++V  + ++  LCK++++ +A ++++ MVS G  PD  
Sbjct: 164 RARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLV 223

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT LV      G +  A+ L+ +M   G   + VTY  ++  LC +G ++ + +    L
Sbjct: 224 AYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFREL 283

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           +     PN  TYS L+    +   V    K++ ++     +PN+V+YN ++ GL    R 
Sbjct: 284 VANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMAC---RPNVVTYNTMIWGLSMVDRN 340

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           EEA   FR++   GF P+  +Y  L R+L M
Sbjct: 341 EEAYGMFREMSECGFVPDARTYRGLKRALRM 371



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNALLLGLCKSR 496
           M   G   +  T S +++GLC  G + +ALE F   +E    +PDV ++  L+ GLCK  
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 497 RTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
           R D + ++F+ M+  G   PN  TY  LV+G+  QD L+ +  V+ E + R    +    
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 556 RLVMQYDFE 564
             +M   F+
Sbjct: 121 NTLMAALFQ 129


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 216/443 (48%), Gaps = 6/443 (1%)

Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG--YP 165
           L KA  + KA+ V   + S    P AS+Y  ++  L ++G+     +L  +M + G  +P
Sbjct: 141 LGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFP 200

Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
            +T+TY+ LV     LG  + +++  D +   GL P A  Y+ LL A Y + G   A+ L
Sbjct: 201 -DTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLL-AIYFKSGDEKALGL 258

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
           + ++  KG  P + +Y  L+ GL K GR E+A   F ++   G +P+VV  N L+     
Sbjct: 259 VQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGK 318

Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSL-AYHGKTDHALKVLDEMVKGRFRPSAA 344
            GR E+A +L  +M     +P +VTYN +I +L         A    ++M      PS+ 
Sbjct: 319 AGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSF 378

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAF-AIIQSL 403
           +Y+ +I   C   +V+  +  L++M  +   P    Y  L    G  K  EA   +   L
Sbjct: 379 TYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLEL 438

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
                 S    Y  +I +L + G+  +A  L  EM K G  PD Y Y++L+ GL   G+I
Sbjct: 439 KENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMI 498

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           EEA      MEE    PD+++ N +L GL ++ R + + E+F  M +    P+  +Y  +
Sbjct: 499 EEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTI 558

Query: 524 VEGIAHQDELELSAEVLKELQLR 546
           +  ++     E +A++++E+  R
Sbjct: 559 LGSLSRSGMFEEAAKLMREMGSR 581



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 191/406 (47%), Gaps = 3/406 (0%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PD +  + L+    K  +   AI++ + M ++G+ P A  YT L+    K G+   A+ L
Sbjct: 200 PDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEK-ALGL 258

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
           V++M+D G      TY  L++GL   G +  +      +++ G  P+    + L+    K
Sbjct: 259 VQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGK 318

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK-EGRTEEAIRFFRDLPSKGFEPNVV 274
              +  A+KL D + +    PN+V+YN ++  L + +    EA  +F  + + G  P+  
Sbjct: 319 AGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSF 378

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +Y+IL+   C   R E+A  LL EMD     P    Y  LI +L    + + A ++  E+
Sbjct: 379 TYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLEL 438

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKV 393
            +   R SA  Y  +I  L   G+    V   ++M    C P+   YN L + L   G +
Sbjct: 439 KENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMI 498

Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
           +EAF+ ++++     +     +  ++  L R G+  QA ++  +M      PD+ +Y+++
Sbjct: 499 EEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTI 558

Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
           +  L   G+ EEA ++   M    ++ D   ++++L  + K    D
Sbjct: 559 LGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDD 604



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 158/322 (49%), Gaps = 3/322 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +  ++ DA+     M+  G KPDVV   NL+    KA +++ A+K+ + M S    P+  
Sbjct: 283 KSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVV 342

Query: 135 SYTYLVNCLCK-KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
           +Y  ++  L + K     A    EKM+  G   ++ TY+ L+ G C    + ++L  L+ 
Sbjct: 343 TYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEE 402

Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
           + +KG  P    Y  L+ A  K +   AA +L  ++    G+ +   Y V++  L K GR
Sbjct: 403 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGR 462

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
             EA+  F ++   G  P+V +YN L+  L   G  EEA   L  M+    +P + ++NI
Sbjct: 463 PSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNI 522

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           ++  LA  G+ + A ++  +M     +P A SYN I+  L   G  +   K + +M  R 
Sbjct: 523 ILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRG 582

Query: 374 CKPNEGTYNGLAMLCGVGKVQE 395
            + +  TY+  ++L  VGKV E
Sbjct: 583 FEYDHITYS--SILEAVGKVDE 602



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 46/254 (18%)

Query: 80  NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           ++A    E+M + G  P     + L+   CK N+++KA+ ++E M   G  P  ++Y  L
Sbjct: 359 SEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 418

Query: 140 VNCLCK--------------KGNVGY---------------------AMQLVEKMEDYGY 164
           +N L K              K N G                      A+ L  +M+  G 
Sbjct: 419 INALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGC 478

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK----ERGVH 220
             +   YN+L+ GL   G + ++   L  + + G  P+  +++ +L    +    E+   
Sbjct: 479 NPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATE 538

Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
             MK+ D +I    KP+ VSYN +L  L + G  EEA +  R++ S+GFE + ++Y+ +L
Sbjct: 539 MFMKMKDSLI----KPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSIL 594

Query: 281 RSLCMEGRWEEANE 294
            ++   G+ +E +E
Sbjct: 595 EAV---GKVDEDDE 605



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 49/263 (18%)

Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA----ASYNPIIARLCSEGKVDLVV 363
           + TY  LI  L   G      K++ EMV+    P+     A  + ++  L   GK  +V 
Sbjct: 95  LTTYMPLIRCLDDCGLFGEMWKMIQEMVRS---PTCVIGPADLSEVVKIL---GKAKMVN 148

Query: 364 KCLD---QMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYV 418
           K L    Q+  R+CKP   TYN +  ML   G  ++   +   + N+ +  P    Y  +
Sbjct: 149 KALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVL 208

Query: 419 ITSLCRKG---------------------KTY-------------QAFQLLYEMTKYGFT 444
           +++  + G                     K Y             +A  L+ EM   G  
Sbjct: 209 VSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKALGLVQEMKDKGCA 268

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           P  +TY+ LI+GL   G +E+A  +F+ M +   KPDV   N L+    K+ R + +L++
Sbjct: 269 PTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKL 328

Query: 505 FQMMIEKGQMPNETTYTILVEGI 527
           F  M      PN  TY  +++ +
Sbjct: 329 FDQMRSLKCAPNVVTYNTVIKAL 351


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 169/333 (50%), Gaps = 3/333 (0%)

Query: 215 KERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVV 274
           + RG+ +++++    +      +++SY+  + GLCK+G+  EA+  FR++  KG  P+  
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 275 SYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEM 334
           +YNIL+  LC + + E    L+ EM     SPT+VTY  LI      G+ D A+ +LDEM
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 335 VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR--RCKPNEGTYNGLAM-LCGVG 391
                 P+  +Y  +I  LC  G+V+  +  L +M  R   C PN  TY  L   LC  G
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
             +     +  +           Y  +I  LC+KG   +A  LL EM   G   D   Y+
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYN 307

Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
           SLI GLC  G ++ A E+ ++M E    PDV  + +L+ GLC +   D +L + Q M  K
Sbjct: 308 SLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAK 367

Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           G +PN  TYT L+ G    D  + + +++ E++
Sbjct: 368 GIVPNSVTYTTLINGFTQADRTDHALQLVNEMK 400



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 168/329 (51%), Gaps = 3/329 (0%)

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           +  +YS  +    K+  +  AM++  ++  KG  P+  +YN+L+ GLCK+ + E  +   
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++ ++GF P VV+Y  L+   C  GR + A ++L EM+    +P  VTY  LI  L   
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 322 GKTDHALKVLDEM-VKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
           G+ + A+ VL EM ++G    P+  +Y  +I  LC +G  ++ ++ LD+M    C PN  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
           TY  L   LC  G   EA  ++  +           Y  +I  LC+ G+   A ++   M
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
            + G  PD +TY+SLI+GLC  GL++EAL +   M      P+   +  L+ G  ++ RT
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGI 527
           D +L++   M   G MP    Y IL + +
Sbjct: 390 DHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 154/329 (46%), Gaps = 3/329 (0%)

Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
           D  SY+  +N LCKKG +  AM++  +ME+ G   ++ TYN L+ GLC    L   +  +
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
           D +  +G  P   TY+ L+        V AAM +LD++  +G  PN V+Y  L+ GLC  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 252 GRTEEAIRFFRDLPSKGFE--PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
           G  E AI   +++  +G E  PNVV+Y  L+  LC +G +E   E L EM      P   
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           TY  LI  L   G    A  +L+EMV          YN +I  LC  G++D   +    M
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 370 FHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             +   P+  TY  L   LC  G + EA  ++Q +  K        Y  +I    +  +T
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
             A QL+ EM   G  P    Y  L + L
Sbjct: 390 DHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 145/283 (51%), Gaps = 2/283 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D +L      ++ M ++G  P VV  T L++  C A ++  A+ +++ M   GI P+  
Sbjct: 138 KDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTV 197

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLD 192
           +YT L+  LC  G V  A+ ++++M+  G     N VTY  L+ GLC  G     ++FLD
Sbjct: 198 TYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLD 257

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +I  G  PN  TY+ L+    ++     A  LL++++A G + ++V YN L+ GLCK G
Sbjct: 258 EMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMG 317

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             + A      +  KG  P+V +Y  L++ LC  G  +EA  L+ EM      P  VTY 
Sbjct: 318 ELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYT 377

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
            LI       +TDHAL++++EM      P+   Y  +   L S
Sbjct: 378 TLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLYS 420



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 146/294 (49%), Gaps = 2/294 (0%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++ +A      M  KG  PD      L+  LCK  +++  + +M+ M + G  P   +YT
Sbjct: 106 QIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYT 165

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C  G V  AM ++++ME  G   NTVTY +L++GLC  G + +++  L  +  +
Sbjct: 166 TLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLR 225

Query: 198 G--LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           G    PN  TY+ L+    ++      M+ LD++I  G  PN  +Y  L+ GLC++G   
Sbjct: 226 GNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFL 285

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           EA     ++ + G E +VV YN L+  LC  G  + A E+   M     +P + TY  LI
Sbjct: 286 EAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLI 345

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
             L   G  D AL ++ EM      P++ +Y  +I       + D  ++ +++M
Sbjct: 346 QGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEM 399


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 198/443 (44%), Gaps = 40/443 (9%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYD-LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNC 142
           +Q  R+V K +      +   L+D L K N    A    E ++  G  PD   +  L++ 
Sbjct: 175 IQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHR 234

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
           LCK+  +  A  L  ++   G     V++N+L+ G C  GNL+Q  +    +++  + P+
Sbjct: 235 LCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPD 294

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
            FTYS L+    KE  +  A KL  ++  +G  PN V++  L+ G C  GR +  +  ++
Sbjct: 295 VFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQ 354

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  KG +P+V++YN L+  LC  G   EA +L+ EM      P   TY +LI      G
Sbjct: 355 QMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
             + AL++  EMVK        ++  +I+  C EG+V    + L +M     KP++ TY 
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYT 474

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
                                              VI   C+KG     F+LL EM   G
Sbjct: 475 ----------------------------------MVIHGFCKKGDVKTGFKLLKEMQCDG 500

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK-SRRTDLS 501
             P   TY+ L+ GLC +G ++ A  +   M      PD   +N LL G CK   R D  
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFD 560

Query: 502 LEVFQMMIEKGQMPNETTYTILV 524
               ++  EKG + +  +YT L+
Sbjct: 561 ----KLQSEKGLVQDYGSYTSLI 579



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 193/395 (48%), Gaps = 7/395 (1%)

Query: 136 YTYLVNCLCKKGNVGYAMQ---LVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
           ++ L+N     G    A+Q   LV K  +   P ++  Y  L   L  L   + +  F +
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRK-HNLQIPFHSCGY--LFDRLMKLNLTSPAWAFYE 214

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            ++  G  P+   ++ L+    KE  ++ A  L  +I  +G +P +VS+N L+ G CK G
Sbjct: 215 EILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSG 274

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
             ++  R  R +      P+V +Y++L+  LC EG+ ++AN+L  EM      P  VT+ 
Sbjct: 275 NLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFT 334

Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
            LI      G+ D  +++  +M++   +P   +YN +I  LC  G +    K + +M  R
Sbjct: 335 TLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR 394

Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
             KP++ TY  L    C  G ++ A  I + +  +        +  +I+  CR+G+  +A
Sbjct: 395 GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEA 454

Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
            + L EM + G  PD  TY+ +I G C +G ++   ++   M+   + P V  +N LL G
Sbjct: 455 ERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNG 514

Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           LCK  +   +  +   M+  G +P++ TY IL+EG
Sbjct: 515 LCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEG 549



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 160/310 (51%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++HK+N+A L    +  +G +P VV    L+   CK+  + +  ++   M+ + + PD  
Sbjct: 237 KEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVF 296

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +Y+ L+N LCK+G +  A +L  +M D G   N VT+ +L+ G C+ G  +  ++   ++
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
           ++KG+ P+  TY+ L+    K   +  A KL+ ++  +G KP+  +Y +L+ G CKEG  
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDL 416

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           E A+   +++  +G E + V++  L+   C EG+  EA   L EM      P   TY ++
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I      G      K+L EM      P   +YN ++  LC +G++      LD M +   
Sbjct: 477 IHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536

Query: 375 KPNEGTYNGL 384
            P++ TYN L
Sbjct: 537 VPDDITYNIL 546



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 194/419 (46%), Gaps = 5/419 (1%)

Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
           +KG    +      +E  G   + + ++ L+      G  + ++Q   RL++K  +   F
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCF-RLVRKHNLQIPF 190

Query: 205 -TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
            +  +L +   K      A    ++I+  G  P++  +NVL+  LCKE +  EA   F +
Sbjct: 191 HSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGE 250

Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
           +  +G  P VVS+N L+   C  G  ++   L   M      P + TY++LI  L   G+
Sbjct: 251 IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ 310

Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG 383
            D A K+  EM      P+  ++  +I   C  G+ DL ++   QM  +  KP+  TYN 
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370

Query: 384 LAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKY 441
           L   LC VG ++EA  ++  +  ++   P +F Y  +I   C++G    A ++  EM K 
Sbjct: 371 LINGLCKVGDLREAKKLVIEM-TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G   D+  +++LI G C EG + EA      M E   KPD   +  ++ G CK       
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG 489

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
            ++ + M   G +P   TY +L+ G+  Q +++ +  +L  +    VV +     ++++
Sbjct: 490 FKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 146/293 (49%), Gaps = 38/293 (12%)

Query: 96  PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
           PDV   + L+  LCK  ++  A K+   M   G++P+  ++T L+N  C  G     M++
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352

Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
            ++M   G   + +TYN+L+ GLC +G+L ++ + +  + Q+GL P+ FTY+ L++   K
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412

Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN--- 272
           E  + +A+++  +++ +G + + V++  L++G C+EG+  EA R  R++   G +P+   
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472

Query: 273 --------------------------------VVSYNILLRSLCMEGRWEEANELLAEMD 300
                                           VV+YN+LL  LC +G+ + AN LL  M 
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML 532

Query: 301 GGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
                P  +TYNIL+     HG  +   K+  E  KG  +    SY  +I  L
Sbjct: 533 NLGVVPDDITYNILLEGHCKHGNREDFDKLQSE--KGLVQ-DYGSYTSLIGDL 582


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 221/488 (45%), Gaps = 14/488 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R  KL DA L L     K   P VV   +++   CK   +  A      ++  G++P   
Sbjct: 218 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVY 277

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           S+  L+N LC  G++  A++L   M  +G   ++VTYN LV+G  +LG ++ + + +  +
Sbjct: 278 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDM 337

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK-PNLVSYNVLLTGLCKEGR 253
           + KGL P+  TY+ LL    +   +   + LL D++++G +  +++ Y+V+L+GLCK GR
Sbjct: 338 LDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGR 397

Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
            +EA+  F DL + G  P++V+Y+I++  LC  G+++ A  +  EM      P   T   
Sbjct: 398 VDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGA 457

Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
           ++  L   G    A  +LD ++          YN +I      G ++  ++         
Sbjct: 458 IMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESG 517

Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
             PN  T+N L    C    + EA  I+  +           Y  ++ +    G      
Sbjct: 518 ITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIE 577

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLC------------MEGLIEEALEIFVVMEEYDYKP 480
           +L  EM   G  P + TYS + +GLC             E ++E+   +   ME     P
Sbjct: 578 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITP 637

Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
           D   +N ++  LC+ +    + E+F+ M  +   P   TY IL++ +     +  +   L
Sbjct: 638 DQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFL 697

Query: 541 KELQLRQV 548
             LQ R V
Sbjct: 698 YSLQKRNV 705



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 226/472 (47%), Gaps = 13/472 (2%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   ++++   L++M  +          ++LY+  + +KM    K          I D +
Sbjct: 155 RLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKE---------IKDKN 205

Query: 135 SYTY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
            +TY  +V+ LC++  +  A+  +   E      + V++NS++   C LG ++ +  F  
Sbjct: 206 EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFC 265

Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
            +++ GLVP+ ++++ L+        +  A++L  D+   G +P+ V+YN+L+ G    G
Sbjct: 266 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLG 325

Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTY 311
               A    +D+  KG  P+V++Y ILL   C  G  +    LL +M   G    +I+ Y
Sbjct: 326 MISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPY 385

Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
           ++++  L   G+ D AL +  ++      P   +Y+ +I  LC  GK D+ V+  D+M +
Sbjct: 386 SVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCY 445

Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
           +R  PN  T   + + LC  G + EA +++ SL +  ++     Y  VI    + G   +
Sbjct: 446 KRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEE 505

Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
           A +L     + G TP+  T++SLI G C    I EA +I  V++ Y   P V ++  L+ 
Sbjct: 506 ALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMD 565

Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
                       E+ + M  +G  P   TY+++ +G+    +LE   +VL+E
Sbjct: 566 AYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRE 617



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 224/466 (48%), Gaps = 26/466 (5%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-----IIPDASSYTYLV 140
           ++ M+ KG  PDV+  T LL   C+   +   + +++ M+S G     IIP    Y+ ++
Sbjct: 334 IQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIP----YSVML 389

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           + LCK G V  A+ L   +E YG   + V Y+ ++ GLC LG  + +++  D +  K ++
Sbjct: 390 SGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRIL 449

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
           PN+ T   ++    ++  +  A  LLD +I+ G   +++ YN+++ G  K G  EEA+  
Sbjct: 450 PNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALEL 509

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           F+     G  PNV ++N L+   C      EA ++L  +      P++V+Y  L+ + A 
Sbjct: 510 FKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYAN 569

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD-----LVVKCLDQMFH---- 371
            G      ++  EM      P+  +Y+ I   LC   K++     L  + L++  H    
Sbjct: 570 CGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRD 629

Query: 372 ---RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGK 427
                  P++ TYN +   LC V  +  AF + + + ++        Y  +I SLC  G 
Sbjct: 630 MESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGC 689

Query: 428 TYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA 487
             +A + LY + K   +   + Y+++I+  C++G  E A+ +F  + +  +   + +++A
Sbjct: 690 IRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSA 749

Query: 488 LLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           ++  LC+      S   F +M+ +G  P+     ++++     DEL
Sbjct: 750 VINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMIK----SDEL 791



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 185/380 (48%), Gaps = 2/380 (0%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
           N  TY+++V GLC    L  ++ FL     K + P+  +++ ++ +  K   V  A    
Sbjct: 205 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFF 264

Query: 227 DDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME 286
             ++  G  P++ S+N+L+ GLC  G   EA+    D+   G EP+ V+YNIL++   + 
Sbjct: 265 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLL 324

Query: 287 GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR-PSAAS 345
           G    A E++ +M     SP ++TY IL+      G  D  L +L +M+   F   S   
Sbjct: 325 GMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIP 384

Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG 404
           Y+ +++ LC  G+VD  +     +      P+   Y+ +   LC +GK   A  +   + 
Sbjct: 385 YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMC 444

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K+          ++  LC+KG   +A  LL  +   G T D   Y+ +I G    G IE
Sbjct: 445 YKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIE 504

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
           EALE+F V  E    P+V  FN+L+ G CK++    + ++  ++   G +P+  +YT L+
Sbjct: 505 EALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLM 564

Query: 525 EGIAHQDELELSAEVLKELQ 544
           +  A+   ++   E+ +E++
Sbjct: 565 DAYANCGSIKSIEELRREMK 584



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 200/442 (45%), Gaps = 36/442 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++++A      + + G  PD+V  + +++ LCK  K   A++V + M    I+P++ +  
Sbjct: 397 RVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLG 456

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            ++  LC+KG +  A  L++ +   G   + + YN ++ G    G + ++L+     I+ 
Sbjct: 457 AIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIES 516

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G+ PN  T++ L+    K + +  A K+LD I   G  P++VSY  L+      G  +  
Sbjct: 517 GITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSI 576

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
               R++ ++G  P  V+Y+++ + LC   + E  N++L E              IL   
Sbjct: 577 EELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRE-------------RIL--- 620

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
                K +H L+   +M      P   +YN II  LC    +    +   +M  +   P 
Sbjct: 621 ----EKFNHVLR---DMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPT 673

Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLL 435
             TYN L   LC  G +++A   + SL  K+N S  +F Y  VI + C KG    A  L 
Sbjct: 674 SATYNILIDSLCIYGCIRKADRFLYSL-QKRNVSLSKFAYTTVIKAHCVKGDPEMAVILF 732

Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
            ++   GF      YS++I  LC   L  E+   F +M      PD+D    ++      
Sbjct: 733 NQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMI------ 786

Query: 496 RRTDLSLEVFQMMIEKGQMPNE 517
            ++D   E+    I+ G +P++
Sbjct: 787 -KSD---ELLSWTIKWGLLPDQ 804



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 393 VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
           V E+  I++ + ++  +   + Y  V+ +     K +  ++ + +        + +TYS+
Sbjct: 159 VDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKD-------KNEHTYST 211

Query: 453 LIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKG 512
           ++ GLC +  +E+A+      E  D  P V +FN+++   CK    D++   F  +++ G
Sbjct: 212 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCG 271

Query: 513 QMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
            +P+  ++ IL+ G+       L   + + L+L   +++  VE
Sbjct: 272 LVPSVYSHNILINGLC------LVGSIAEALELASDMNKHGVE 308


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 231/503 (45%), Gaps = 75/503 (14%)

Query: 69  NNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS 126
           NN   H  + ++++  ++  + MVS G+  +V     +++ LCK  K+++A+ V   ++ 
Sbjct: 207 NNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILK 266

Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPT---NTVTYNSLVRGLCMLGN 183
           SGI P+  ++  +V+  CK G++  A++LV KME     +   N+VTYNSL+ G C +G 
Sbjct: 267 SGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGG 326

Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN- 242
           +  + +  + +++  + PN  TY+ ++E   +   +  A++L D+++ +G  PN V YN 
Sbjct: 327 ITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNS 386

Query: 243 ----------------------------------VLLTGLCKEGRTEEAIRFFRDLPSKG 268
                                             +L  GLC+ G    A++F   +    
Sbjct: 387 IMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENN 446

Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
              +  S+NIL+  LC    +  A +LLA M      P +VT+  LI      G  + A+
Sbjct: 447 LIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAV 506

Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC 388
           +V D+MVKG  +P+   YN II  LC +G VD V + L  +  R    +  TYN L    
Sbjct: 507 QVYDKMVKGEEKPNLLVYNSIINGLCKDGLVD-VARSLVDVLQRMGLVDTITYNTL---- 561

Query: 389 GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSY 448
                                         I      GK  +AF+L   M   G    S 
Sbjct: 562 ------------------------------INGYFNCGKFDKAFKLSTLMQNAGILASSA 591

Query: 449 TYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMM 508
           TY+++I+ LC  G ++EA E+  +M  +   PD   +  L++ + K+   +  +E+   M
Sbjct: 592 TYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYM 651

Query: 509 IEKGQMPNETTYTILVEGIAHQD 531
           + KG +P++ TY  +V  +  ++
Sbjct: 652 VLKGVVPDKLTYENIVSPLLQEE 674



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 223/470 (47%), Gaps = 5/470 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           ++++  +G    +    N L  L K N++ +   V + MVS G + + +++  +V+ LCK
Sbjct: 191 IKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCK 250

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL--IQKGLV-PN 202
              +  A+ +  ++   G   N VT+N +V G C +G+++ +L+ + ++  +  G + PN
Sbjct: 251 DCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPN 310

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
           + TY+ L++   K  G+  A +L ++++    +PN+ +Y  ++ G  + G  EEA+R   
Sbjct: 311 SVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCD 370

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
           ++  +G  PN V YN ++  L MEG  + A+ +  +M          T +IL   L  +G
Sbjct: 371 EMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNG 430

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
               ALK L+++++      A S+N +I  LC         + L +M+ R   P+  T+ 
Sbjct: 431 YITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFG 490

Query: 383 GLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
            L    C  G ++ A  +   +   +       Y  +I  LC+ G    A  L+  + + 
Sbjct: 491 TLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRM 550

Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
           G   D+ TY++LI G    G  ++A ++  +M+          +N ++  LCK      +
Sbjct: 551 GLV-DTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEA 609

Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
            E+  MM+  G +P+  TY  LV  I      E   E+   + L+ VV +
Sbjct: 610 KELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPD 659



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 219/478 (45%), Gaps = 26/478 (5%)

Query: 89  MVSKGHKP-DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
           M   G  P +V++A N  Y +C++N                     + +  LV    + G
Sbjct: 143 MTVNGLSPLEVLEALNNSYGICESNH--------------------AVFDALVRACTQIG 182

Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
               A ++++K++  G       +N+ +  L  +  +++       ++  G + N  T++
Sbjct: 183 ATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFN 242

Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL--- 264
            ++ A  K+  +  A+ +   I+  G  PN+V++N+++ G CK G  + A++  R +   
Sbjct: 243 VVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIM 302

Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
            +   +PN V+YN L+   C  G    A EL  EM   D  P + TY  +I   +  G  
Sbjct: 303 SAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCL 362

Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL 384
           + AL++ DEMV+    P++  YN I+  L  EG VD        M  ++   ++ T + L
Sbjct: 363 EEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSIL 422

Query: 385 AM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
              LC  G +  A   +  +           +  +I  LC+      A QLL  M   G 
Sbjct: 423 TRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGL 482

Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
            PD  T+ +LI G C EG IE A++++  M + + KP++  +N+++ GLCK    D++  
Sbjct: 483 VPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARS 542

Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
           +  ++   G + +  TY  L+ G  +  + + + ++   +Q   +++ SA    V+++
Sbjct: 543 LVDVLQRMG-LVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKF 599


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 201/426 (47%), Gaps = 6/426 (1%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII-PDASS 135
           H+ +  F  L     KG   + V  T L+  L   NK+K A+ + + +V   I  PD   
Sbjct: 121 HRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVM 180

Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
           Y  +++ LCKKG+   A  L+  ME      +T  YN ++   C  G L+ +   L+ + 
Sbjct: 181 YGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMK 240

Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
           QK + P+  TY+ L++   K         L  ++I     P++ ++N ++ GLCKEG+ E
Sbjct: 241 QKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVE 300

Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
           +A      +  KG EPN ++YN+++   C+ G+   A  +   M      P I++Y  LI
Sbjct: 301 DAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALI 360

Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
                  K D A+++  E+ +   +PS  + + ++  L   G+ +      D+M      
Sbjct: 361 NGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHI 420

Query: 376 PNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
           PN   Y    +L G    G V+EA +    L  ++  +  + Y  VI  LC+ GK  +A 
Sbjct: 421 PN--LYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAH 478

Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
               ++   G  PD  TY+++I G C EGL++EA ++   ME+    PD   +N ++ G 
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGF 538

Query: 493 CKSRRT 498
            +S + 
Sbjct: 539 FRSSKV 544



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 209/468 (44%), Gaps = 37/468 (7%)

Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
           +  A  +   MV++  +P A S++ L+  L    +    + +  ++     P +    ++
Sbjct: 53  LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALST 112

Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
           +V   C++   +     L    +KG+  N  T++ L+   + E  V  A+ L   ++ + 
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 234 -GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
             +P+ V Y  ++ GLCK+G T++A    R +     +P+   YNI++ + C +G  + A
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
             LL EM   +  P I+TY  LI  L    + +    +  EM+     P   ++N +I  
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292

Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSP 411
           LC EGKV+   + +  M  +  +PNE TYN  +   C  G++  A  I  S+ +K     
Sbjct: 293 LCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPD 352

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL-------CME---- 460
              Y  +I     K K  +A QL  E+++ G  P   T S L+RGL       C +    
Sbjct: 353 IISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFD 412

Query: 461 ------------------------GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
                                   GL+EEA+  F  +E      ++  + A++ GLCK+ 
Sbjct: 413 EMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNG 472

Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           + D +   F+ +   G  P+  TYT ++ G   +  L+ + ++L++++
Sbjct: 473 KLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 167/340 (49%), Gaps = 1/340 (0%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   +D  L+ A   L  M  K   PD++  T+L+  L K ++ +K   +   M+   I 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIY 280

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           PD  ++  +++ LCK+G V  A +++  M + G   N +TYN ++ G C+ G + ++ + 
Sbjct: 281 PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI 340

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
            D +I KG+ P+  +Y+ L+    +++ +  AM+L  +I   G KP++V+ +VLL GL +
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFE 400

Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
            GRTE A  FF ++ + G  PN+ ++  LL      G  EEA     +++       I  
Sbjct: 401 VGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
           Y  +I  L  +GK D A    +++      P   +Y  +I+  C EG +D     L +M 
Sbjct: 461 YTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520

Query: 371 HRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
              C P+  TYN +        KV E  A ++ +  K  S
Sbjct: 521 DNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFS 560



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 131/271 (48%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++ K+ DA   +  M+ KG +P+ +    ++   C   +M +A ++ + M+  GI PD  
Sbjct: 295 KEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDII 354

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           SYT L+N   +K  +  AMQL  ++   G   + VT + L+RGL  +G    +  F D +
Sbjct: 355 SYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEM 414

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G +PN +T+  LL   +K   V  AM     +  +    N+  Y  ++ GLCK G+ 
Sbjct: 415 QAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKL 474

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
           ++A   F  LP  G  P+V++Y  ++   C EG  +EA ++L +M+     P   TYN++
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVI 534

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
           +       K       L E+    F   AA+
Sbjct: 535 VRGFFRSSKVSEMKAFLKEIAGKSFSFEAAT 565



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 179/384 (46%), Gaps = 4/384 (1%)

Query: 167 NTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP-NAFTYSFLLEAAYKERGVHAAMKL 225
           + V+++ L++ L  + + +  +    R I K  +P +AF  S ++ +            +
Sbjct: 71  SAVSFSKLLKALVHMKHYSSVVSIF-REIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSV 129

Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF-EPNVVSYNILLRSLC 284
           L     KG   N V++  L+ GL  E + ++A+  F+ L  +   EP+ V Y  ++  LC
Sbjct: 130 LAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLC 189

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
            +G  ++A +LL  M+ G   P    YNI+I +    G  D A  +L+EM +    P   
Sbjct: 190 KKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDII 249

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSL 403
           +Y  +I  L    + + V     +M H    P+  T+N  +  LC  GKV++A  I+  +
Sbjct: 250 TYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYM 309

Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
             K     +  Y  V+   C +G+  +A ++   M   G  PD  +Y++LI G   +  +
Sbjct: 310 IEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKM 369

Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
           ++A+++F  + +   KP +   + LL GL +  RT+ +   F  M   G +PN  T+  L
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTL 429

Query: 524 VEGIAHQDELELSAEVLKELQLRQ 547
           + G      +E +     +L+ R+
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRR 453



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 1/201 (0%)

Query: 81  DAFLQLERMVSK-GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
           D  +QL R +S+ G KP +V  + LL  L +  + + A    + M ++G IP+  ++  L
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTL 429

Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
           +    K G V  AM    K+E     TN   Y +++ GLC  G L+++    ++L   GL
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGL 489

Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
            P+  TY+ ++    +E  +  A  +L  +   G  P+  +YNV++ G  +  +  E   
Sbjct: 490 HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKA 549

Query: 260 FFRDLPSKGFEPNVVSYNILL 280
           F +++  K F     +  +L+
Sbjct: 550 FLKEIAGKSFSFEAATVELLM 570


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 191/434 (44%), Gaps = 34/434 (7%)

Query: 81  DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
           DA     RM+     P      N+L  L K  +    I + +    +GI PD  + + L+
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 141 NCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
           NC C   ++ +A  +   +   GY  N +T N+L++GLC  G + ++L F D+++ +G  
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
            +  +Y  L+    K     A  +LL  +     KP+LV Y  ++  LCK     +A   
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223

Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
           + ++  KG  PNV +Y  L+   C+ G  +EA  LL EM   + +P + T+NILI +LA 
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283

Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
            GK D A+ + +EM      P+  +Y  +I  LC    ++  +    +M  +  +PN  +
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYS 343

Query: 381 YNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           Y  L                                  + +LC+ G+   A Q    +  
Sbjct: 344 YTIL----------------------------------LDALCKGGRLENAKQFFQHLLV 369

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G+  +  TY+ +I GLC  GL  + +++   ME     P+   F  ++  L +    D 
Sbjct: 370 KGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDK 429

Query: 501 SLEVFQMMIEKGQM 514
           + +  + MI +G +
Sbjct: 430 AEKFLREMIARGLL 443



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 158/364 (43%), Gaps = 34/364 (9%)

Query: 165 PTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
           P  T  +N+++  L         +    +    G+ P+  T S L+        +  A  
Sbjct: 58  PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFS 117

Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
           +  +I+ +G  PN ++ N L+ GLC  G  + A+ F   + ++GF+ + VSY  L+  LC
Sbjct: 118 VFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLC 177

Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
             G  +    LL +++G    P +V Y  +I  L  +     A  +  EM+     P+  
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237

Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLG 404
           +Y  +I   C                                   +G ++EAF+++  + 
Sbjct: 238 TYTTLIHGFCI----------------------------------MGNLKEAFSLLNEMK 263

Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
            K  +     +  +I +L ++GK  +A  L  EM      P+  TY+SLI GLC    +E
Sbjct: 264 LKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLE 323

Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
            A+ +   M+E   +P+V ++  LL  LCK  R + + + FQ ++ KG   N  TY +++
Sbjct: 324 RAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMI 383

Query: 525 EGIA 528
            G+ 
Sbjct: 384 NGLC 387



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 145/313 (46%), Gaps = 3/313 (0%)

Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
           P    +N +L+ L K  R    I  F+     G  P++ + +IL+   C       A  +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
            A +      P  +T N LI  L + G+   AL   D++V   F+    SY  +I  LC 
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF 414
            G+   V + L ++     KP+   Y  +   LC    + +A  +   +  K   SP  F
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVK-GISPNVF 237

Query: 415 -YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
            Y  +I   C  G   +AF LL EM      PD YT++ LI  L  EG I+EA+ +F  M
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297

Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
           +  +  P++  + +L+ GLCK+   + ++ + + M E+G  PN  +YTIL++ +     L
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRL 357

Query: 534 ELSAEVLKELQLR 546
           E + +  + L ++
Sbjct: 358 ENAKQFFQHLLVK 370



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 118/225 (52%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           ++  L DA      M+ KG  P+V   T L++  C    +K+A  ++  M    I PD  
Sbjct: 213 KNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVY 272

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           ++  L++ L K+G +  AM L E+M+      N VTY SL+ GLC   +L +++    ++
Sbjct: 273 TFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKM 332

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
            ++G+ PN ++Y+ LL+A  K   +  A +    ++ KG   N+ +YNV++ GLCK G  
Sbjct: 333 KEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 392

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
            + +     +  KG  PN +++  ++ +L  +   ++A + L EM
Sbjct: 393 GDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREM 437



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 87/163 (53%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++ K+++A    E M  K   P++V  T+L+  LCK + +++AI + + M   GI 
Sbjct: 279 DALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 338

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
           P+  SYT L++ LCK G +  A Q  + +   GY  N  TYN ++ GLC  G     +  
Sbjct: 339 PNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 398

Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
             ++  KG +PNA T+  ++ A  ++     A K L ++IA+G
Sbjct: 399 KSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARG 441



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 94/191 (49%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           L +AF  L  M  K   PDV     L+  L K  K+ +A+ + E M    + P+  +YT 
Sbjct: 252 LKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTS 311

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           L++ LCK  ++  A+ L +KM++ G   N  +Y  L+  LC  G L  + QF   L+ KG
Sbjct: 312 LIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKG 371

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
              N  TY+ ++    K       M L   +  KG  PN +++  ++  L ++   ++A 
Sbjct: 372 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAE 431

Query: 259 RFFRDLPSKGF 269
           +F R++ ++G 
Sbjct: 432 KFLREMIARGL 442



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 1/223 (0%)

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A+   + M+  R  P    +N I++ L    +   V+    Q       P+  T + L  
Sbjct: 45  AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
             C +  +  AF++  ++  +           +I  LC  G+  +A     ++   GF  
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
           D  +Y +LI GLC  G  +    +   +E +  KPD+  +  ++  LCK++    + +++
Sbjct: 165 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLY 224

Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
             MI KG  PN  TYT L+ G      L+ +  +L E++L+ +
Sbjct: 225 SEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNI 267



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 67/130 (51%)

Query: 71  DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
           D   ++H L  A    ++M  +G +P+V   T LL  LCK  +++ A +  + ++  G  
Sbjct: 314 DGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYH 373

Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
            +  +Y  ++N LCK G  G  M L  KME  G   N +T+ +++  L      +++ +F
Sbjct: 374 LNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKF 433

Query: 191 LDRLIQKGLV 200
           L  +I +GL+
Sbjct: 434 LREMIARGLL 443


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 207/441 (46%), Gaps = 4/441 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVS--SGIIPDASSYTYLVNCLCKK 146
           M+  G +P +V    LL    K  +  K   +++ M +  SG +P+  ++  ++  L +K
Sbjct: 228 MLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARK 287

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G++  A ++VE M       ++ TYN L+ GL   G + ++      +  +G++P   TY
Sbjct: 288 GDLEEAAEMVEGMR-LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTY 346

Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
           + ++    +   V AA     ++ A G +P++++YN LL G CK G  +EA+  F DL  
Sbjct: 347 NAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406

Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
            G  P V++YNIL+   C  G  EEA  L  EM      P + TY IL+           
Sbjct: 407 AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAM 466

Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA- 385
           A +  DEM+    +P   +YN  I    + G +    +  + M       +  TYN L  
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILID 526

Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
            LC  G + +A  +   + +         Y  +I + C +G   +A +   +M   G  P
Sbjct: 527 GLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAP 586

Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
            + TY+  I   C  G +  A   F  M E   +P+   +N L+  LC++ RT L+   F
Sbjct: 587 SAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHF 646

Query: 506 QMMIEKGQMPNETTYTILVEG 526
             M+E+G +PN+ TYT+L++G
Sbjct: 647 HEMLERGLVPNKYTYTLLIDG 667



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 191/410 (46%), Gaps = 37/410 (9%)

Query: 84  LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA-IKVMEMMVSSGIIPDASSYTYLVNC 142
           LQLE M ++G  P VV    +++ L ++ +++ A +K +EM  + G+ PD  +Y  L+N 
Sbjct: 330 LQLE-MENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR-AMGLQPDVITYNSLLNG 387

Query: 143 LCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPN 202
            CK G++  A+ L   +   G     +TYN L+ G C LG+L ++ +  + ++++G +P+
Sbjct: 388 YCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPD 447

Query: 203 AFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR 262
             TY+ L++ ++    +  A +  D++++KG +P+  +YN  +      G   +A R   
Sbjct: 448 VCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLRE 507

Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
            +  +G   + V+YNIL+  LC  G   +A +L  +M      P  +TY  LI +    G
Sbjct: 508 VMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERG 567

Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
               A K   +M+     PSA +Y   I   C  G +        +M     +PNE TYN
Sbjct: 568 LLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 627

Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
            L                                  I +LCR G+T  A++  +EM + G
Sbjct: 628 VL----------------------------------IHALCRTGRTQLAYRHFHEMLERG 653

Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
             P+ YTY+ LI G C EG  E+A+  +  M +    PD     AL  G 
Sbjct: 654 LVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 217/469 (46%), Gaps = 8/469 (1%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
              M S G  PDV     +L  L  A +      V   M+  GI P   +Y  L++   K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 146 KGNVGYAMQLVEKMEDYGYPT--NTVTYNSLVRGLCMLGNLNQSLQFLD--RLIQKGLVP 201
           +G       L+++ME  G     N VT+N ++ GL   G+L ++ + ++  RL +K    
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA--- 306

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
           ++FTY+ L+     +  V  A  L  ++  +G  P +V+YN ++ GL + G+ E A   F
Sbjct: 307 SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366

Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
            ++ + G +P+V++YN LL   C  G  +EA  L  ++     +PT++TYNILI      
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426

Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
           G  + A ++ +EMV+    P   +Y  ++    +   + +  +  D+M  +  +P+   Y
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486

Query: 382 NG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
           N  +     +G + +AF + + +  +  SS    Y  +I  LC+ G    A  L  +M  
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
            G  PD  TY+ LI   C  GL+ EA + F  M      P    +   +   C+      
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
           +   F+ M+E+G  PNE TY +L+  +      +L+     E+  R +V
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLV 655



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 178/391 (45%), Gaps = 35/391 (8%)

Query: 78  KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
           ++  A ++   M + G +PDV+   +LL   CKA  +K+A+ +   +  +G+ P   +Y 
Sbjct: 358 QVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYN 417

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L++  C+ G++  A +L E+M + G   +  TY  L++G     +L  + +F D ++ K
Sbjct: 418 ILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSK 477

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           GL P+ F Y+  + A      +  A +L + ++ +G   + V+YN+L+ GLCK G   +A
Sbjct: 478 GLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDA 537

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
                 +   G +P+ ++Y  L+ + C  G   EA +   +M     +P+ VTY + I +
Sbjct: 538 KDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHA 597

Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
               G    A     +M++    P+  +YN +I  LC  G+  L  +   +M  R   PN
Sbjct: 598 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPN 657

Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
           + TY  L                                  I   C++G    A +  +E
Sbjct: 658 KYTYTLL----------------------------------IDGNCKEGNWEDAMRFYFE 683

Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
           M + G  PD  T+ +L +G   EG +  A+E
Sbjct: 684 MHQNGIHPDYLTHKALFKGF-DEGHMNHAIE 713



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 3/282 (1%)

Query: 87  ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
           E MV +G  PDV   T L+     A  +  A +  + M+S G+ PD  +Y   +      
Sbjct: 437 EEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTL 496

Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
           G +  A +L E M   G  ++TVTYN L+ GLC  GNLN +     +++  GL P+  TY
Sbjct: 497 GAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITY 556

Query: 207 SFLLEAAYKERG-VHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           + L+  A+ ERG +  A K   D+I+ G  P+ V+Y V +   C+ G    A  +FR + 
Sbjct: 557 TCLIH-AHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKML 615

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
            +G EPN ++YN+L+ +LC  GR + A     EM      P   TY +LI      G  +
Sbjct: 616 EEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWE 675

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
            A++   EM +    P   ++  +      EG ++  ++ L+
Sbjct: 676 DAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLE 716



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 1/142 (0%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M+S G  P  V  T  ++  C+   +  A      M+  G+ P+  +Y  L++ LC+ G 
Sbjct: 579 MISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGR 638

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
              A +   +M + G   N  TY  L+ G C  GN   +++F   + Q G+ P+  T+  
Sbjct: 639 TQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKA 698

Query: 209 LLEAAYKERGVHAAMKLLDDII 230
           L +  + E  ++ A++ L++ +
Sbjct: 699 LFK-GFDEGHMNHAIEYLENAV 719



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           R   L  A+    +M+ +G +P+ +    L++ LC+  + + A +    M+  G++P+  
Sbjct: 600 RRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKY 659

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
           +YT L++  CK+GN   AM+   +M   G   + +T+ +L +G    G++N ++++L+  
Sbjct: 660 TYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDE-GHMNHAIEYLENA 718

Query: 195 I 195
           +
Sbjct: 719 V 719


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 228/490 (46%), Gaps = 13/490 (2%)

Query: 77  HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
           HKL        + + KG K DVV  ++ +    K+  +  A  V + M+  GI P+  +Y
Sbjct: 341 HKL------FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394

Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
           T L+  LC+ G +  A  +  ++   G   + VTY+SL+ G C  GNL       + +I+
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454

Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
            G  P+   Y  L++   K+  +  AM+    ++ +  + N+V +N L+ G C+  R +E
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514

Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
           A++ FR +   G +P+V ++  ++R   MEGR EEA  L   M      P  + Y  LI 
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574

Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
           +   H K    L++ D M + +     A  N +I  L    +++   K  + +   + +P
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634

Query: 377 NEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           +  TYN   M+CG   + ++ EA  I + L              +I  LC+      A +
Sbjct: 635 DIVTYN--TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
           +   M + G  P++ TY  L+        IE + ++F  M+E    P + +++ ++ GLC
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752

Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS-ES 552
           K  R D +  +F   I+   +P+   Y IL+ G      L + A +L E  LR  V  + 
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL-VEAALLYEHMLRNGVKPDD 811

Query: 553 AVERLVMQYD 562
            ++R + +Y+
Sbjct: 812 LLQRALSEYN 821



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 212/460 (46%), Gaps = 1/460 (0%)

Query: 86  LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
           L  ++  G  P+VV    L+   CK  +M +A  + ++M   GI PD  +Y+ L++   K
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333

Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
            G +G   +L  +    G   + V ++S +      G+L  +     R++ +G+ PN  T
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393

Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
           Y+ L++   ++  ++ A  +   I+ +G +P++V+Y+ L+ G CK G        + D+ 
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453

Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
             G+ P+VV Y +L+  L  +G    A     +M G      +V +N LI       + D
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513

Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
            ALKV   M     +P  A++  ++     EG+++  +    +MF    +P+   Y  L 
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573

Query: 386 -MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
              C   K      +   +   + S+       VI  L +  +   A +    + +    
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633

Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
           PD  TY+++I G C    ++EA  IF +++   + P+      L+  LCK+   D ++ +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693

Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
           F +M EKG  PN  TY  L++  +   ++E S ++ +E+Q
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 186/408 (45%), Gaps = 1/408 (0%)

Query: 75  RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
           +D ++ +AF    +++ +G +P +V  ++L+   CK   ++    + E M+  G  PD  
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462

Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
            Y  LV+ L K+G + +AM+   KM       N V +NSL+ G C L   +++L+    +
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522

Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
              G+ P+  T++ ++  +  E  +  A+ L   +   G +P+ ++Y  L+   CK  + 
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582

Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
              ++ F  +       ++   N+++  L    R E+A++    +  G   P IVTYN +
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642

Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
           I       + D A ++ + +    F P+  +   +I  LC    +D  ++    M  +  
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702

Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
           KPN  TY  L         ++ +F + + +  K  S     Y  +I  LC++G+  +A  
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762

Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
           + ++       PD   Y+ LIRG C  G + EA  ++  M     KPD
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/458 (20%), Positives = 197/458 (43%), Gaps = 3/458 (0%)

Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY-PTN 167
           C+   + KA+++       G++    S   ++N L     V       +K+   G  P+ 
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
              +  ++  L   G + ++L F   ++++G      + + +L+    ++ +  A +LL 
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLS 275

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
            ++  G  PN+V++  L+ G CK G  + A   F+ +  +G EP++++Y+ L+      G
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
                ++L ++         +V ++  I      G    A  V   M+     P+  +Y 
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNK 406
            +I  LC +G++        Q+  R  +P+  TY+ L    C  G ++  FA+ + +   
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455

Query: 407 QNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEA 466
                   Y  ++  L ++G    A +   +M       +   ++SLI G C     +EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 467 LEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEG 526
           L++F +M  Y  KPDV  F  ++       R + +L +F  M + G  P+   Y  L++ 
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575

Query: 527 IAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
                +  +  ++   +Q  ++ ++ AV  +V+   F+
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613


>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 805

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 209/441 (47%), Gaps = 39/441 (8%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA-NKMKKAIKVMEMMVSSGIIPDASSYT 137
           +++A L   RM+   H P +V+   +L  L K  N     + +   M S G+ PD  + +
Sbjct: 186 VDNAVLSFNRMLQMRHTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 245

Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
            L+NC        Y  ++       GY  NT+T  +L++GLC+ G +N++L F D ++  
Sbjct: 246 ILINC--------YYFKM-------GYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLAL 290

Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
           G   N  TY  L+    K     AA+++L  I  K    N+V Y+ ++ GLCK+    +A
Sbjct: 291 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDA 350

Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
              + ++  K   P VV++              +A  L  EM   + +P + T+NIL+ +
Sbjct: 351 YGLYSEMIVKRIPPTVVTF--------------KAFSLFHEMVLKNINPNVYTFNILVDA 396

Query: 318 LAYHGKTDHALKVLDEMVKGRF--------RPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
           L   GK   A  V+ +MV            +P+  SYN +I   C  G++    K LDQM
Sbjct: 397 LCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQM 456

Query: 370 FHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
             R   PN  TYN  L  LC    V +A A++ +  ++        Y  ++  LC++G+ 
Sbjct: 457 RDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRL 516

Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
             A  +  ++   G+   ++TY+ +I GLC+EGL++EA  +   ME+    PDV  +  +
Sbjct: 517 KDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTI 576

Query: 489 LLGLCKSRRTDLSLEVFQMMI 509
           +  L +    D + ++ + +I
Sbjct: 577 IHALFEKDENDKAEKLVRELI 597



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 139/260 (53%), Gaps = 10/260 (3%)

Query: 116 KAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGY--------PTN 167
           KA  +   MV   I P+  ++  LV+ LCK G +  A  ++ KM D             N
Sbjct: 370 KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPN 429

Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
           TV+YN+L+ G C  G L+ + + LD++  +G  PN  TY+ LL A  K   V  A+ L++
Sbjct: 430 TVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVN 489

Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
           +   +G +P++ +YN L+ GLCK+GR ++A   F+DL  KG+     +YNI++  LC+EG
Sbjct: 490 NFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEG 549

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR--PSAAS 345
             +EA  LL++M+     P +VTY  +I +L    + D A K++ E++   FR  P+   
Sbjct: 550 LLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVRVFRKSPTDIR 609

Query: 346 YNPIIARLCSEGKVDLVVKC 365
               +  L   GK    ++C
Sbjct: 610 DGRYLTTLTQRGKRIPTIRC 629



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 170/367 (46%), Gaps = 47/367 (12%)

Query: 93  GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
           G++P+ +  T L+  LC   K+ +A+   + +++ G   +  +Y  L+N LCK G    A
Sbjct: 256 GYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAA 315

Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLC---------------MLGNLN------QSLQFL 191
           +Q++ ++E     TN V Y++++ GLC               ++  +       ++    
Sbjct: 316 LQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTFKAFSLF 375

Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAA----MKLLDDII----AKGGKPNLVSYNV 243
             ++ K + PN +T++ L++A  K+  +  A    +K++D+ +        KPN VSYN 
Sbjct: 376 HEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNT 435

Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
           L+ G CK GR   A +    +  +G  PNV++YN LL +LC     ++A  L+       
Sbjct: 436 LIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQG 495

Query: 304 RSPTIVTYNILIGSLAYHGK-TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
             P + TYN L+  L   G+  D  L   D ++KG   P+  +YN +I  LC EG +D  
Sbjct: 496 IQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPT-WTYNIMINGLCLEGLLDEA 554

Query: 363 VKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNK-QNSSPQEFYKYVITS 421
              L +M    C P+  TY                 II +L  K +N   ++  + +I  
Sbjct: 555 ETLLSKMEDNGCIPDVVTYQ---------------TIIHALFEKDENDKAEKLVRELIVR 599

Query: 422 LCRKGKT 428
           + RK  T
Sbjct: 600 VFRKSPT 606



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 3/205 (1%)

Query: 58  VYTKPNRKPGNN-NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKK 116
           ++ KPN    N   D   +  +L+ A+  L++M  +G  P+V+   +LL+ LCK + + K
Sbjct: 424 MHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDK 483

Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
           AI ++      GI PD  +Y  LV+ LCK+G +  A  + + +   GY   T TYN ++ 
Sbjct: 484 AIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMIN 543

Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGK- 235
           GLC+ G L+++   L ++   G +P+  TY  ++ A +++     A KL+ ++I +  + 
Sbjct: 544 GLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVRVFRK 603

Query: 236 -PNLVSYNVLLTGLCKEGRTEEAIR 259
            P  +     LT L + G+    IR
Sbjct: 604 SPTDIRDGRYLTTLTQRGKRIPTIR 628


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 213/449 (47%), Gaps = 48/449 (10%)

Query: 89  MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
           M++ G + D      L+  LC  N++ +  K+++++ S G+ P+   Y  L++ LC+ G 
Sbjct: 166 MMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGK 225

Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
           VG A  L+ +MED     N VT+N L+ G C  GN  Q+L  L++    G VP+  + + 
Sbjct: 226 VGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTK 281

Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
           +LE          A ++L+ + + GG  ++V+YN L+ G C  G+ +  + F + + +KG
Sbjct: 282 VLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKG 341

Query: 269 FEPNVVSYNILL-----------------------------------RSLCMEGRWEEAN 293
             PNV +YN+L+                                   R LC E R E+  
Sbjct: 342 CLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGF 401

Query: 294 ---ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
              EL+ E   G R   I  YN +I  L      D + + L +M  G   P A   + +I
Sbjct: 402 SILELMEESKEGSRG-HISPYNSIIYGLLKKNGFDESAEFLTKM--GNLFPRAVDRSLMI 458

Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAII-QSLGNKQN 408
              C +G ++   +  DQM      P+   YN L       G V+EA  ++ + + N   
Sbjct: 459 LEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCF 518

Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
             P  F   VIT  CR+GK   A +L+ ++T  G  P++ TYS LI  LC  G +++A++
Sbjct: 519 PIPSTF-NAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQ 577

Query: 469 IFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
           +F+ M +    PD+  +N+LLL L + R 
Sbjct: 578 VFMQMVDKGILPDLFIWNSLLLSLSQERH 606



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 131/552 (23%), Positives = 248/552 (44%), Gaps = 38/552 (6%)

Query: 12  ANPSPEPFRKAYGFYSQIPN-LHSFSLNKGFIRVLASTQ---------------VTISPK 55
           A+ + E FR A    S +PN +HS S  +  I  L + +               +   P 
Sbjct: 49  ASEALEYFRWA----STVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPG 104

Query: 56  DSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMK 115
           D ++    R  G    TR          +++  +V K H    ++  N + D+     + 
Sbjct: 105 DDIFITIIRGLGRARMTR--------TVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDID 156

Query: 116 KAIKVM-EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
            A +   + M++SG+  D  ++  L+  LC    +G   +L++ ++  G   NTV YN+L
Sbjct: 157 MAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTL 216

Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
           +  LC  G + ++   ++ +      PN  T++ L+    KE     A+ LL+   + G 
Sbjct: 217 LHALCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGF 272

Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
            P++VS   +L  LC  GRT EA      + S G   +VV+YN L++  C  G+ +    
Sbjct: 273 VPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLH 332

Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
            L +M+     P + TYN+LI   +  G  D AL + ++M     + +  +++ +I  LC
Sbjct: 333 FLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLC 392

Query: 355 SEGKVDLVVKCLDQMFHRR--CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
           SE +++     L+ M   +   + +   YN +   L       E+   +  +GN    + 
Sbjct: 393 SEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAV 452

Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
                 +I   C+KG    A ++  +M   G  P    Y+ L+ G   +G + EA+E+  
Sbjct: 453 DR--SLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMN 510

Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
            M   +  P    FNA++ G C+  + + +L++ + +  +G +PN  TY+ L++ +    
Sbjct: 511 EMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNG 570

Query: 532 ELELSAEVLKEL 543
           +L+ + +V  ++
Sbjct: 571 DLQKAMQVFMQM 582



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 173/381 (45%), Gaps = 38/381 (9%)

Query: 82  AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
           A + LE+  S G  PDVV  T +L  LC A +  +A +V+E + S G + D  +Y  L+ 
Sbjct: 260 ALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIK 319

Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
             C  G V   +  +++ME+ G   N  TYN L+ G    G L+ +L   + +   G+  
Sbjct: 320 GFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKW 379

Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLD--DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
           N  T+  L+     E  +     +L+  +   +G + ++  YN ++ GL K+   +E+  
Sbjct: 380 NFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAE 439

Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
           F   + +    P  V  ++++   C +G  E+A  +  +M      P+I+ YN L+   +
Sbjct: 440 FLTKMGN--LFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFS 497

Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
             G    A+++++EM+     P  +++N +I   C +GKV+  +K ++ +  R C PN  
Sbjct: 498 KQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTE 557

Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
           TY                            SP      +I  LCR G   +A Q+  +M 
Sbjct: 558 TY----------------------------SP------LIDVLCRNGDLQKAMQVFMQMV 583

Query: 440 KYGFTPDSYTYSSLIRGLCME 460
             G  PD + ++SL+  L  E
Sbjct: 584 DKGILPDLFIWNSLLLSLSQE 604



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 41/377 (10%)

Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQK-GLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
           TY +L+  LC     +   Q LD +    G  P    +  ++    + R     +K+LD 
Sbjct: 71  TYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDL 130

Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFR-DLPSKGFEPNVVSYNILLRSLCMEG 287
           +    G P+L  +N +L  L KE   + A  F+R  + + G E +  ++ IL++ LC+  
Sbjct: 131 VYKFHGSPSLKIFNSILDVLVKED-IDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTN 189

Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
           R  E  +LL  +     +P  V YN L+ +L  +GK   A  +++EM      P+  ++N
Sbjct: 190 RIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED----PNDVTFN 245

Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQ 407
            +I+  C EG     +  L++ F                   +G V +  ++ +      
Sbjct: 246 ILISGYCKEGNSVQALVLLEKSF------------------SMGFVPDVVSVTK------ 281

Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
                     V+  LC  G+T +A ++L  +   G   D   Y++LI+G C  G ++  L
Sbjct: 282 ----------VLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGL 331

Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
                ME     P+VD +N L+ G  +S   DL+L++F  M   G   N  T+  L+ G+
Sbjct: 332 HFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGL 391

Query: 528 AHQDELELSAEVLKELQ 544
             ++ +E    +L+ ++
Sbjct: 392 CSEERIEDGFSILELME 408



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 135/330 (40%), Gaps = 48/330 (14%)

Query: 256 EAIRFFRDLPSKGFEPNVV----SYNILLRSLCMEGRWEEANELLAEMDGG-DRSPTIVT 310
           EA+ +FR   +    PN V    +Y  L+  LC   R++   +LL EM       P    
Sbjct: 51  EALEYFRWASTV---PNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDI 107

Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII----------AR-------- 352
           +  +I  L     T   +KVLD + K    PS   +N I+          AR        
Sbjct: 108 FITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDIDMAREFYRKSMM 167

Query: 353 -----------------LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQ 394
                            LC   ++    K L  +  R   PN   YN L   LC  GKV 
Sbjct: 168 ASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVG 227

Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
            A    ++L N+        +  +I+  C++G + QA  LL +    GF PD  + + ++
Sbjct: 228 RA----RNLMNEMEDPNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVL 283

Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
             LC  G   EA E+   +E      DV  +N L+ G C + +  + L   + M  KG +
Sbjct: 284 EILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCL 343

Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
           PN  TY +L+ G +    L+L+ ++  +++
Sbjct: 344 PNVDTYNVLISGFSESGMLDLALDLFNDMK 373



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 86/152 (56%)

Query: 79  LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
           + DA    ++M+ +G  P ++    L++   K   +++A+++M  M+++   P  S++  
Sbjct: 467 IEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNA 526

Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
           ++   C++G V  A++LVE +   G   NT TY+ L+  LC  G+L +++Q   +++ KG
Sbjct: 527 VITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKG 586

Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDII 230
           ++P+ F ++ LL +  +ER     M  +D I+
Sbjct: 587 ILPDLFIWNSLLLSLSQERHFSKNMLNIDYIV 618


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.136    0.392 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,673,962,766
Number of Sequences: 23463169
Number of extensions: 364038406
Number of successful extensions: 1097374
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6960
Number of HSP's successfully gapped in prelim test: 5454
Number of HSP's that attempted gapping in prelim test: 843163
Number of HSP's gapped (non-prelim): 88948
length of query: 568
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 420
effective length of database: 8,886,646,355
effective search space: 3732391469100
effective search space used: 3732391469100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)