BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041458
(568 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A3KPF8|PP131_ARATH Pentatricopeptide repeat-containing protein At1g79080,
chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2
SV=1
Length = 576
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/577 (67%), Positives = 482/577 (83%), Gaps = 14/577 (2%)
Query: 1 MATLLSSVSTLANPSPEPFRKAYGFYSQIPN--LHSFSLNKGFIRVLASTQVTISPKDSV 58
M+TLL+SV ++A+P P RKA GF S IP+ LH S++KG RVLASTQ+T+SPKDS
Sbjct: 1 MSTLLNSVLSMASPESSP-RKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 59
Query: 59 YT------KPNRKPGN-NNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKA 111
+T KP+ G+ ++D R + L+D+F LE +V+ GHKP+V +T LLYDLCKA
Sbjct: 60 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 119
Query: 112 NKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTY 171
N++KKAI+V+E+MVSSGIIPDAS+YTYLVN LCK+GNVGYAMQLVEKMED+GYP+NTVTY
Sbjct: 120 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 179
Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
N+LVRGLCMLG+LNQSLQF++RL+QKGL PNAFTYSFLLEAAYKERG A+KLLD+II
Sbjct: 180 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 239
Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
KGG+PNLVSYNVLLTG CKEGRT++A+ FR+LP+KGF+ NVVSYNILLR LC +GRWEE
Sbjct: 240 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 299
Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG--RFRPSAASYNPI 349
AN LLAEMDGGDR+P++VTYNILI SLA+HG+T+ AL+VL EM KG +FR +A SYNP+
Sbjct: 300 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 359
Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQN 408
IARLC EGKVDLVVKCLD+M +RRCKPNEGTYN + LC KVQEAF IIQSL NKQ
Sbjct: 360 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 419
Query: 409 SSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
+FYK VITSLCRKG T+ AFQLLYEMT+ GF PD++TYS+LIRGLC+EG+ A+E
Sbjct: 420 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 479
Query: 469 IFVVMEEYD-YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
+ +MEE + KP VDNFNA++LGLCK RRTDL++EVF+MM+EK +MPNETTY ILVEGI
Sbjct: 480 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Query: 528 AHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
AH+DELEL+ EVL EL+LR+V+ ++AV+R+VMQ++ +
Sbjct: 540 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNLD 576
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/494 (39%), Positives = 313/494 (63%), Gaps = 6/494 (1%)
Query: 68 NNNDTRH--RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
+NN R R +L + F LE MV G+ PD++ T L+ C+ K +KA K++E++
Sbjct: 105 SNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164
Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
SG +PD +Y +++ CK G + A+ ++++M + VTYN+++R LC G L
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221
Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
Q+++ LDR++Q+ P+ TY+ L+EA ++ GV AMKLLD++ +G P++V+YNVL+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
G+CKEGR +EAI+F D+PS G +PNV+++NI+LRS+C GRW +A +LLA+M S
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
P++VT+NILI L G A+ +L++M + +P++ SYNP++ C E K+D ++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 366 LDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCR 424
L++M R C P+ TYN L LC GKV++A I+ L +K S Y VI L +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
GKT +A +LL EM PD+ TYSSL+ GL EG ++EA++ F E +P+
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
FN+++LGLCKSR+TD +++ MI +G PNET+YTIL+EG+A++ + + E+L EL
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELC 581
Query: 545 LRQVVSESAVERLV 558
+ ++ +S+ E++
Sbjct: 582 NKGLMKKSSAEQVA 595
Score = 39.3 bits (90), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 48/110 (43%)
Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
Y F + ++ +R + G +EE + M + PD+ L+ G C+
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150
Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQL 545
+T + ++ +++ G +P+ TY +++ G E+ + VL + +
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 273/473 (57%), Gaps = 2/473 (0%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
LE MV KG+ PDV+ T L+ + KA++VME++ G PD +Y L+N CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 170
Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
+ A +++++M + +TVTYN ++ LC G L+ +L+ L++L+ P T
Sbjct: 171 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230
Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
Y+ L+EA E GV A+KL+D+++++G KP++ +YN ++ G+CKEG + A R+L
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290
Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
KG EP+V+SYNILLR+L +G+WEE +L+ +M P +VTY+ILI +L GK +
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
A+ +L M + P A SY+P+IA C EG++D+ ++ L+ M C P+ YN L
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
A LC GK +A I LG S Y + ++L G +A ++ EM G
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
PD TY+S+I LC EG+++EA E+ V M ++ P V +N +LLG CK+ R + ++ V
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERL 557
+ M+ G PNETTYT+L+EGI + E+ +L +SE + +RL
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 212/410 (51%), Gaps = 7/410 (1%)
Query: 77 HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
++++DA L+RM SK PD V ++ LC K+ A+KV+ ++S P +Y
Sbjct: 172 NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITY 231
Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
T L+ +G V A++L+++M G + TYN+++RG+C G ++++ + + L
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
KG P+ +Y+ LL A + KL+ + ++ PN+V+Y++L+T LC++G+ EE
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
A+ + + KG P+ SY+ L+ + C EGR + A E L M P IV YN ++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
+L +GK D AL++ ++ + P+++SYN + + L S G + + +M P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 377 NEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
+E TYN + + LC G V EAF ++ + + + Y V+ C+ + A +L
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI------FVVMEEYDYK 479
M G P+ TY+ LI G+ G EA+E+ + EY +K
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFK 581
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 143/276 (51%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
++ ++ AF + + KG +PDV+ LL L K ++ K+M M S P+
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y+ L+ LC+ G + AM L++ M++ G + +Y+ L+ C G L+ +++FL+ +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
I G +P+ Y+ +L K A+++ + G PN SYN + + L G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
A+ ++ S G +P+ ++YN ++ LC EG +EA ELL +M + P++VTYNI+
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
+ + + A+ VL+ MV RP+ +Y +I
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
RD K+ +A L+ M KG PD L+ C+ ++ AI+ +E M+S G +PD
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y ++ LCK G A+++ K+ + G N+ +YN++ L G+ ++L + +
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+ G+ P+ TY+ ++ +E V A +LL D+ + P++V+YN++L G CK R
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM 299
E+AI + G PN +Y +L+ + G EA EL ++
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
QSLG + + F++ CR G ++ LL M + G+ PD + LI+G
Sbjct: 83 QSLGFRDTQMLKIFHRS-----CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
I +A+ + ++E++ +PDV +NAL+ G CK R D + V M K P+ TY
Sbjct: 138 RNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 521 TILVEGIAHQDELELSAEVLKEL 543
I++ + + +L+L+ +VL +L
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQL 219
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 262/544 (48%), Gaps = 43/544 (7%)
Query: 44 VLASTQVTISPKDSVYTKPNRKPGNNNDTRHR-------DHKLNDAFLQLERMVSKGHKP 96
V+ T+SP S + + + D R + + KL+DA MV P
Sbjct: 20 VVRGNAATVSPSFSFFWRRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFP 79
Query: 97 DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
+++ + LL + K NK I + E M + GI + +Y+ L+NC C++ + A+ ++
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
KM GY N VT +SL+ G C +++++ +D++ G PN T++ L+ +
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT---------------------- 254
AM L+D ++AKG +P+LV+Y V++ GLCK G T
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 255 -------------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
++A+ F+++ +KG PNVV+Y+ L+ LC GRW +A+ LL++M
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
+P + T++ LI + GK A K+ DEMVK PS +Y+ +I C ++D
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
+ + M + C P+ TYN L C +V+E + + + + Y +I
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
L + G A ++ EM G P+ TY++L+ GLC G +E+A+ +F ++ +P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
+ +N ++ G+CK+ + + ++F + KG P+ Y ++ G + E + +
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 541 KELQ 544
KE++
Sbjct: 560 KEMK 563
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 215/427 (50%), Gaps = 2/427 (0%)
Query: 77 HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
+K ++A ++RMV+KG +PD+V ++ LCK A ++ M + P Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
+++ LCK ++ A+ L ++ME G N VTY+SL+ LC G + + + L +I+
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
+ + P+ FT+S L++A KE + A KL D+++ + P++V+Y+ L+ G C R +E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
A + F + SK P+VV+YN L++ C R EE E+ EM VTYNILI
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
L G D A ++ EMV P+ +YN ++ LC GK++ + + + + +P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 377 NEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
TYN + +C GKV++ + + +L K Y +I+ CRKG +A L
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
EM + G P+S Y++LIR +G E + E+ M + D L+ +
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHD 618
Query: 496 RRTDLSL 502
R D S
Sbjct: 619 GRLDKSF 625
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 148/290 (51%), Gaps = 1/290 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D ++ KL +A + MV + P +V ++L+ C +++ +A ++ E MVS
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
PD +Y L+ CK V M++ +M G NTVTYN L++GL G+ + + +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
++ G+ PN TY+ LL+ K + AM + + + +P + +YN+++ G+CK
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ E+ F +L KG +P+VV+YN ++ C +G EEA+ L EM P
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
YN LI + G + + +++ EM F A++ ++ + +G++D
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 622
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 248/508 (48%), Gaps = 36/508 (7%)
Query: 73 RHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPD 132
R D KL+DA MV P +V+ + LL + K NK I + E M + GI +
Sbjct: 56 RLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 115
Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLD 192
+Y+ L+NC C++ + A+ ++ KM GY + VT NSL+ G C ++ ++ +
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 193 RLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG 252
++++ G P++FT++ L+ ++ A+ L+D ++ KG +P+LV+Y +++ GLCK G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 253 RTE-----------------------------------EAIRFFRDLPSKGFEPNVVSYN 277
+ +A+ F ++ +KG PNVV+YN
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 278 ILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG 337
L+R LC GRW +A+ LL++M +P +VT++ LI + GK A K+ DEM+K
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 338 RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEA 396
P +Y+ +I C ++D + M + C PN TYN L C +V E
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 397 FAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
+ + + + Y +I + + A + +M G PD TYS L+ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
LC G +E AL +F ++ +PD+ +N ++ G+CK+ + + ++F + KG PN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQ 544
TYT ++ G + E + + +E++
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMK 563
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 176/385 (45%), Gaps = 1/385 (0%)
Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
L+ ++ +++ P+ +S LL A K + L + + G NL +Y++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
L+ C+ + A+ + G+EP++V+ N LL C R +A L+ +M
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
P T+N LI L H + A+ ++D MV +P +Y ++ LC G +DL +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
L +M + +P YN + LC V +A + + NK Y +I L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
C G+ A +LL +M + P+ T+S+LI EG + EA +++ M + PD+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
+++L+ G C R D + +F++MI K PN TY L++G ++ E+ +E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 543 LQLRQVVSESAVERLVMQYDFEGIE 567
+ R +V + ++ F+ E
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARE 446
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 137/273 (50%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+ +DA L M+ + P+VV + L+ K K+ +A K+ + M+ I PD +Y+
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+N C + A + E M N VTYN+L++G C +++ ++ + Q+
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
GLV N TY+ L+ ++ R A + +++ G P++++Y++LL GLC G+ E A
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ F L EP++ +YNI++ +C G+ E+ +L + P +VTY ++
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
G + A + EM + P + +YN +I
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 1/290 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D ++ KL +A + M+ + PD+ ++L+ C +++ +A + E+M+S
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ +Y L+ CK V M+L +M G NTVTY +L+ G + +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
+++ G++P+ TYS LL+ V A+ + + + +P++ +YN+++ G+CK
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ E+ F L KG +PNVV+Y ++ C +G EEA+ L EM P T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
YN LI + G + +++ EM RF A++ ++ + +G++D
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLD 622
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 148/306 (48%)
Query: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
+NDA M +KG +P+VV +L+ LC + A +++ M+ I P+ +++
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
L++ K+G + A +L ++M + TY+SL+ G CM L+++ + +I K
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
PN TY+ L++ K + V M+L ++ +G N V+Y L+ G + + A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
F+ + S G P++++Y+ILL LC G+ E A + + P I TYNI+I +
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
GK + + + +P+ +Y +++ C +G + +M P+
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 379 GTYNGL 384
GTYN L
Sbjct: 572 GTYNTL 577
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 69/149 (46%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K+ A + E + +PD+ ++ +CKA K++ + + G+ P+ +YT
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+++ C+KG A L +M++ G ++ TYN+L+R G+ S + + +
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
V +A T + + R + +K+L
Sbjct: 601 RFVGDASTIGLVTNMLHDGRLDKSFLKML 629
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 250/506 (49%), Gaps = 36/506 (7%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
D KL+DA MV P +V+ LL + K K I + E M I+
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y L+NC C++ + A+ L+ KM GY + VT +SL+ G C ++ ++ +D++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++ G P+ T++ L+ + A+ L+D ++ +G +PNLV+Y V++ GLCK G T
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 255 -----------------------------------EEAIRFFRDLPSKGFEPNVVSYNIL 279
++A+ F+++ +KG PNVV+Y+ L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
+ LC GRW +A++LL++M +P +VT+N LI + GK A K+ D+M+K
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFA 398
P +YN ++ C ++D + + M + C P+ TYN L C +V++
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
+ + + ++ Y +I L G A ++ +M G PD TYS L+ GLC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
G +E+ALE+F M++ + K D+ + ++ G+CK+ + D ++F + KG PN
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 519 TYTILVEGIAHQDELELSAEVLKELQ 544
TY ++ G+ + L+ + +LK+++
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMK 567
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 241/492 (48%), Gaps = 1/492 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R +++ A L +M+ G++P +V ++LL C ++ A+ +++ MV G PD
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
++T L++ L A+ LV++M G N VTY +V GLC G+ + +L L+++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+ + ++ ++++ K R V A+ L ++ KG +PN+V+Y+ L++ LC GR
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+A + D+ K PN+V++N L+ + EG++ EA +L +M P I TYN L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
+ H + D A ++ + MV P +YN +I C +V+ + +M HR
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
+ TY L L G A + + + + Y ++ LC GK +A +
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
+ M K D Y Y+++I G+C G +++ ++F + KP+V +N ++ GLC
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
R + + + M E G +PN TY L+ + SAE+++E++ + V +++
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 611
Query: 554 VERLVMQYDFEG 565
LV +G
Sbjct: 612 TIGLVANMLHDG 623
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 167/403 (41%), Gaps = 78/403 (19%)
Query: 218 GVHAAMKLLDDIIAKGGK------PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEP 271
G+H MKL D I GG P++V +N LL+ + K + + I +
Sbjct: 60 GLHD-MKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH 118
Query: 272 NVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVL 331
+ +YNIL+ C + A LL +M P+IVT + L+ + + A+ ++
Sbjct: 119 GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY----NGLAM- 386
D+MV+ +RP ++ +I L K V +D+M R C+PN TY NGL
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 387 -------------------------------LCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
LC V +A + + + K Y
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 416 KYVITSLCRKGKTYQAFQLLY-----------------------------------EMTK 440
+I+ LC G+ A QLL +M K
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
PD +TY+SL+ G CM +++A ++F M D PDV +N L+ G CKS+R +
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
E+F+ M +G + + TYT L++G+ H + + + +V K++
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 149/320 (46%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+ +DA L M+ K P++V L+ K K +A K+ + M+ I PD +Y
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
LVN C + A Q+ E M + VTYN+L++G C + + + +
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
GLV + TY+ L++ + + A K+ +++ G P++++Y++LL GLC G+ E+A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ F + + ++ Y ++ +C G+ ++ +L + P +VTYN +I
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
L A +L +M + P++ +YN +I +G + + +M R +
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609
Query: 378 EGTYNGLAMLCGVGKVQEAF 397
T +A + G++ ++F
Sbjct: 610 ASTIGLVANMLHDGRLDKSF 629
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 164/419 (39%), Gaps = 92/419 (21%)
Query: 234 GKPNLVSYNVLLTGLCKEGRT---------------------EEAIRFFRDLPSKGFEPN 272
G P + ++ L G+C GR ++AI F + P+
Sbjct: 25 GNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPS 84
Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG--------SLAY---- 320
+V +N LL ++ +++ L +M + + TYNILI SLA
Sbjct: 85 IVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLG 144
Query: 321 ----------------------HGK-TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
HGK A+ ++D+MV+ +RP ++ +I L
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 358 KVDLVVKCLDQMFHRRCKPNEGTY----NGLAM--------------------------- 386
K V +D+M R C+PN TY NGL
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 387 -----LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
LC V +A + + + K Y +I+ LC G+ A QLL +M +
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
P+ T+++LI EG EA +++ M + PD+ +N+L+ G C R D +
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
++F+ M+ K P+ TY L++G +E E+ +E+ R +V ++ ++Q
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 49/293 (16%)
Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
R+L KG P + +I L +C GR + GD Y ++ + +
Sbjct: 19 RNLQGKG-NPRIAPSSIDLCGMCYWGRAFSSGS-------GD-------YREILRNGLHD 63
Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
K D A+ + MVK R PS +N +++ + K D+V+ ++M +R + G Y
Sbjct: 64 MKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM--QRLEIVHGLY 121
Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
Y +I CR+ + A LL +M K
Sbjct: 122 T--------------------------------YNILINCFCRRSQISLALALLGKMMKL 149
Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
G+ P T SSL+ G C I +A+ + M E Y+PD F L+ GL + +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
+ + M+++G PN TY ++V G+ + + +L+ +L +++ ++ ++ +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 243/492 (49%), Gaps = 36/492 (7%)
Query: 89 MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
MV P + + LL + K K I + E M GI + +Y L+NC C++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
+ A+ L+ KM GY + VT +SL+ G C ++ ++ +D++++ G P+ T++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG---------------- 252
L+ + A+ L+D ++ +G +PNLV+Y V++ GLCK G
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 253 -------------------RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
++A+ F+++ +KG PNVV+Y+ L+ LC GRW +A+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
+LL++M +P +VT+N LI + GK A K+ D+M+K P +YN +I
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
C ++D + + M + C P+ TYN L C +V++ + + + ++
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
Y +I L G A ++ +M G PD TYS L+ GLC G +E+ALE+F
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
M++ + K D+ + ++ G+CK+ + D ++F + KG PN TY ++ G+ +
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 533 LELSAEVLKELQ 544
L+ + +LK+++
Sbjct: 481 LQEAYALLKKMK 492
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 241/492 (48%), Gaps = 1/492 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R +++ A L +M+ G++P +V ++LL C ++ A+ +++ MV G PD
Sbjct: 57 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
++T L++ L A+ LV++M G N VTY +V GLC G+++ + L+++
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+ + ++ ++++ K R V A+ L ++ KG +PN+V+Y+ L++ LC GR
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+A + D+ K PN+V++N L+ + EG++ EA +L +M P I TYN L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I H + D A ++ + MV P +YN +I C +V+ + +M HR
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
+ TY L L G A + + + + Y ++ LC GK +A +
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
+ M K D Y Y+++I G+C G +++ ++F + KP+V +N ++ GLC
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
R + + + M E G +P+ TY L+ + SAE+++E++ + V +++
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 536
Query: 554 VERLVMQYDFEG 565
LV +G
Sbjct: 537 TIGLVANMLHDG 548
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 220/460 (47%), Gaps = 2/460 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+++DA +++MV G++PD + T L++ L NK +A+ +++ MV G P+ +Y
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+VN LCK+G++ A L+ KME + V +N+++ LC +++ +L + K
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G+ PN TYS L+ A +LL D+I K PNLV++N L+ KEG+ EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ D+ + +P++ +YN L+ CM R ++A ++ M D P + TYN LI
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
+ + ++ EM +Y +I L +G D K QM P+
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
TY+ L LC GK+++A + + + Y +I +C+ GK + L
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
++ G P+ TY+++I GLC + L++EA + M+E PD +N L+ +
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
S E+ + M + + + LV + H L+ S
Sbjct: 515 DKAASAELIREM-RSCRFVGDASTIGLVANMLHDGRLDKS 553
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 147/320 (45%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+ +DA L M+ K P++V L+ K K +A K+ + M+ I PD +Y
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+N C + A Q+ E M + TYN+L++G C + + + +
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
GLV + TY+ L++ + + A K+ +++ G P++++Y++LL GLC G+ E+A
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ F + + ++ Y ++ +C G+ ++ +L + P +VTYN +I
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
L A +L +M + P + +YN +I +G + + +M R +
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 534
Query: 378 EGTYNGLAMLCGVGKVQEAF 397
T +A + G++ ++F
Sbjct: 535 ASTIGLVANMLHDGRLDKSF 554
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 34/221 (15%)
Query: 334 MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKV 393
MVK R PS +N +++ + K DLV+ ++M
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM------------------------ 36
Query: 394 QEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
Q LG N Y +I CR+ + A LL +M K G+ P T SSL
Sbjct: 37 -------QRLGISHNLYT---YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 86
Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
+ G C I +A+ + M E Y+PD F L+ GL + ++ + M+++G
Sbjct: 87 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 146
Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
PN TY ++V G+ + +++L+ +L +++ ++ ++ +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 243/505 (48%), Gaps = 36/505 (7%)
Query: 76 DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
D KL+DA MV P +V+ LL + K NK I + E M + I D S
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
Y L+NC C++ + A+ ++ KM GY + VT +SL+ G C +++++ +D++
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
PN T++ L+ + A+ L+D ++A+G +P+L +Y ++ GLCK G +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 256 -----------------------------------EAIRFFRDLPSKGFEPNVVSYNILL 280
+A+ F ++ +KG PNVV+YN L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 281 RSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFR 340
R LC GRW +A+ LL++M +P +VT++ LI + GK A K+ DEM+K
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAI 399
P +Y+ +I C ++D + M + C PN TYN L C +V+E +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 400 IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCM 459
+ + + Y +I L + G A ++ +M G PD TYS L+ GLC
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 460 EGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
G +E+AL +F +++ +PD+ +N ++ G+CK+ + + ++F + KG PN
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 520 YTILVEGIAHQDELELSAEVLKELQ 544
YT ++ G + E + + +E++
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMK 562
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 240/492 (48%), Gaps = 1/492 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R +L A L +M+ G++PD+V ++LL C ++ +A+ +++ M P+
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
++ L++ L A+ L+++M G + TY ++V GLC G+++ +L L ++
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+ + + Y+ +++A + V+ A+ L ++ KG +PN+V+YN L+ LC GR
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+A R D+ + PNVV+++ L+ + EG+ EA +L EM P I TY+ L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I H + D A + + M+ P+ +YN +I C +V+ ++ +M R
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
N TYN L L G A I + + + Y ++ LC+ GK +A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
+ + K PD YTY+ +I G+C G +E+ ++F + KP+V + ++ G C
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
+ + + +F+ M E G +PN TY L+ + SAE++KE++ V +++
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 606
Query: 554 VERLVMQYDFEG 565
+V+ +G
Sbjct: 607 TISMVINMLHDG 618
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 1/271 (0%)
Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
L R++ ++ + ++A +L EM P+IV +N L+ ++A K D + + + M R
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110
Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
SYN +I C ++ L + L +M +P+ T + L C ++ EA
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
A++ + + + +I L K +A L+ M G PD +TY +++ GL
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
C G I+ AL + ME+ + DV + ++ LC + + +L +F M KG PN
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 518 TTYTILVEGIAHQDELELSAEVLKELQLRQV 548
TY L+ + + ++ +L ++ R++
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
K D A+ + EMV+ R PS +N +++ + K DLV+ ++M + R + +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
L I CR+ + A +L +M K G
Sbjct: 120 IL----------------------------------INCFCRRSQLPLALAVLGKMMKLG 145
Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
+ PD T SSL+ G C I EA+ + M +Y+P+ FN L+ GL + ++
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
+ M+ +G P+ TY +V G+ + +++L+ +LK+++ ++ ++ +
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 35/176 (19%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
++MVS G PD++ + LL LCK K++KA+ V E + S + PD +Y ++ +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 146 KGNV--GY---------------------------------AMQLVEKMEDYGYPTNTVT 170
G V G+ A L +M++ G N+ T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 171 YNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLL 226
YN+L+R G+ S + + + G V +A T S ++ + R + +++L
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 246/494 (49%), Gaps = 36/494 (7%)
Query: 87 ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
++M SKG + + ++ C+ K+ A M ++ G PD + L+N LC +
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171
Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
V A++LV++M + G+ +T N+LV GLC+ G ++ ++ +DR+++ G PN TY
Sbjct: 172 CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
+L K AM+LL + + K + V Y++++ GLCK+G + A F ++
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
KGF+ ++++YN L+ C GRW++ +LL +M SP +VT+++LI S GK
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
A ++L EM++ P+ +YN +I C E +++ ++ +D M + C P+ T+N L
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
C ++ + + + + + + Y ++ C+ GK A +L EM P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE-- 503
D +Y L+ GLC G +E+ALEIF +E+ + D+ + ++ G+C + + D + +
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 504 ---------------------------------VFQMMIEKGQMPNETTYTILVEGIAHQ 530
+F+ M E+G P+E TY IL+
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 531 DELELSAEVLKELQ 544
D+ +AE+++E++
Sbjct: 592 DDATTAAELIEEMK 605
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 213/406 (52%), Gaps = 1/406 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K++DA + ++RMV G +P+ V +L +CK+ + A++++ M I DA Y+
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+++ LCK G++ A L +ME G+ + +TYN+L+ G C G + + L +I++
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
+ PN T+S L+++ KE + A +LL +++ +G PN ++YN L+ G CKE R EEA
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
I+ + SKG +P+++++NIL+ C R ++ EL EM VTYN L+
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
GK + A K+ EMV R RP SY ++ LC G+++ ++ ++ + + +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
G Y + +C KV +A+ + SL K Y +I+ LCRK +A L
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
+MT+ G PD TY+ LIR + A E+ M+ + DV
Sbjct: 568 KMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADV 613
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 237/473 (50%), Gaps = 3/473 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K +DA M+ P V+ L + K + + + + + M S GI + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
++NC C+ + YA + K+ GY +TV +N+L+ GLC+ ++++L+ +DR+++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G P T + L+ V A+ L+D ++ G +PN V+Y +L +CK G+T A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ R + + + + V Y+I++ LC +G + A L EM+ I+TYN LIG
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
G+ D K+L +M+K + P+ +++ +I EGK+ + L +M R PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
TYN L C +++EA ++ + +K + +I C+ + +L
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
EM+ G ++ TY++L++G C G +E A ++F M +PD+ ++ LL GLC +
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 497 RTDLSLEVFQMMIEKGQMPNET-TYTILVEGIAHQDELELSAEVLKELQLRQV 548
+ +LE+F IEK +M + Y I++ G+ + +++ + ++ L L+ V
Sbjct: 488 ELEKALEIFG-KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 183/377 (48%), Gaps = 1/377 (0%)
Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
+ ++ +IQ +P ++ L A K + + L + +KG ++ + +++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
+ C+ + A + G+EP+ V +N LL LC+E R EA EL+ M
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
PT++T N L+ L +GK A+ ++D MV+ F+P+ +Y P++ +C G+ L ++
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
L +M R K + Y+ + LC G + AF + + K + Y +I C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
G+ +LL +M K +P+ T+S LI EG + EA ++ M + P+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
+N+L+ G CK R + ++++ +MI KG P+ T+ IL+ G + ++ E+ +E+
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 544 QLRQVVSESAVERLVMQ 560
LR V++ + ++Q
Sbjct: 430 SLRGVIANTVTYNTLVQ 446
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 152/290 (52%), Gaps = 1/290 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D+ ++ KL +A L+ M+ +G P+ + +L+ CK N++++AI+++++M+S G
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
PD ++ L+N CK + ++L +M G NTVTYN+LV+G C G L + +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
++ + + P+ +Y LL+ + A+++ I + ++ Y +++ G+C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
+ ++A F LP KG + + +YNI++ LC + +A+ L +M +P +T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
YNILI + A ++++EM F P+ S ++ + S G++D
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVINMLSSGELD 629
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 146/315 (46%), Gaps = 35/315 (11%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D +D L++AF M KG K D++ L+ C A + K++ M+ I
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ +++ L++ K+G + A QL+++M G NT+TYNSL+ G C L +++Q
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
+D +I KG P+ T++ L+ K + ++L ++ +G N V+YN L+ G C+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA-------EMDGG- 302
G+ E A + F+++ S+ P++VSY ILL LC G E+A E+ E+D G
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 303 --------------DRSPTIV-------------TYNILIGSLAYHGKTDHALKVLDEMV 335
D + + YNI+I L A + +M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 336 KGRFRPSAASYNPII 350
+ P +YN +I
Sbjct: 571 EEGHAPDELTYNILI 585
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 36/316 (11%)
Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN---------------- 312
F +SY L S + + ++A +L +M PT++ +N
Sbjct: 49 FSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVL 108
Query: 313 -------------------ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
I+I K +A + +++K + P +N ++ L
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
C E +V ++ +D+M KP T N L LC GKV +A +I + +
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
Y V+ +C+ G+T A +LL +M + D+ YS +I GLC +G ++ A +F
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
ME +K D+ +N L+ G C + R D ++ + MI++ PN T+++L++ + +
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 533 LELSAEVLKELQLRQV 548
L + ++LKE+ R +
Sbjct: 349 LREADQLLKEMMQRGI 364
>sp|Q9FRS4|PPR22_ARATH Pentatricopeptide repeat-containing protein At1g08610
OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1
Length = 559
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 234/475 (49%), Gaps = 40/475 (8%)
Query: 69 NNDTRHR---DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV 125
NN+ H + KL DA +E M P +NL+ L + +++ KA+ ++ +MV
Sbjct: 107 NNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMV 166
Query: 126 SSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLN 185
SG +PD +Y ++ LCKKG++ A+ L+E M G P + +TYN+++R + GN
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226
Query: 186 QSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLL 245
Q+++F +Q G P TY+ L+E + G A+++L+D+ +G P++V+YN L+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286
Query: 246 TGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS 305
C+ G EE + + S G E N V+YN LL SLC W+E E+L M
Sbjct: 287 NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346
Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
PT++TYNILI L A+ +M++ + P +YN ++ + EG VD ++
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 366 LDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
L + + C P TYN VI L +K
Sbjct: 407 LGLLKNTCCPPGLITYNS----------------------------------VIDGLAKK 432
Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
G +A +L ++M G PD T SLI G C L+EEA ++ +
Sbjct: 433 GLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTY 492
Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
++ GLCK + ++++EV ++M+ G P+ET YT +V+G+ +E+ + +E +
Sbjct: 493 RLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV---EEMGMGSEAV 544
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 200/429 (46%), Gaps = 34/429 (7%)
Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
D + +++ LC G + A +LVE M + + + ++LVRGL + L++++ L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
++ G VP+ TY+ ++ K+ + A+ LL+D+ G P++++YN ++ +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
G E+AIRF++D G P +++Y +L+ +C A E+L +M P IVTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
N L+ G + V+ ++ + +YN ++ LCS D V + L+ M+
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 372 RRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
P TYN L I LC+ +A
Sbjct: 343 TSYCPTVITYNIL----------------------------------INGLCKARLLSRA 368
Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
Y+M + PD TY++++ + EG++++A+E+ +++ P + +N+++ G
Sbjct: 369 IDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDG 428
Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
L K +LE++ M++ G P++ T L+ G + +E + +VLKE R
Sbjct: 429 LAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIR 488
Query: 552 SAVERLVMQ 560
+ RLV+Q
Sbjct: 489 GSTYRLVIQ 497
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 241/454 (53%), Gaps = 7/454 (1%)
Query: 97 DVVQATNLLYDLC-----KANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK-KGNVG 150
D+ +T+ ++DL + + + KA+ ++ + + G +P SY +++ + K N+
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 151 YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLL 210
+A + ++M + N TYN L+RG C GN++ +L D++ KG +PN TY+ L+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 211 EAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFE 270
+ K R + KLL + KG +PNL+SYNV++ GLC+EGR +E ++ +G+
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 271 PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKV 330
+ V+YN L++ C EG + +A + AEM +P+++TY LI S+ G + A++
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 331 LDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCG 389
LD+M P+ +Y ++ +G ++ + L +M P+ TYN L C
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 390 VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
GK+++A A+++ + K S Y V++ CR +A ++ EM + G PD+ T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
YSSLI+G C + +EA +++ M PD + AL+ C + +L++ M+
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
EKG +P+ TY++L+ G+ Q + +L +L
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 241/480 (50%), Gaps = 17/480 (3%)
Query: 82 AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
A ++M +KG P+VV L+ CK K+ K++ M G+ P+ SY ++N
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
LC++G + ++ +M GY + VTYN+L++G C GN +Q+L +++ GL P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
+ TY+ L+ + K ++ AM+ LD + +G PN +Y L+ G ++G EA R
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
R++ GF P+VV+YN L+ C+ G+ E+A +L +M SP +V+Y+ ++
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
D AL+V EMV+ +P +Y+ +I C + + ++M P+E TY
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 382 NGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
L C G +++A + + K Y +I L ++ +T +A +LL ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 441 YGFTPDSYTYS---------------SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNF 485
P TY SLI+G CM+G++ EA ++F M ++KPD +
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL-ELSAEVLKELQ 544
N ++ G C++ + +++ M++ G + + T LV+ + + ++ EL++ ++ L+
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLR 703
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 216/431 (50%), Gaps = 8/431 (1%)
Query: 133 ASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG-NLNQSLQFL 191
+S + +V + + A+ +V + +G+ ++YN+++ N++ +
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
+++ + PN FTY+ L+ + A+ L D + KG PN+V+YN L+ G CK
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
+ ++ + R + KG EPN++SYN+++ LC EGR +E + +L EM+ S VTY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
N LI G AL + EM++ PS +Y +I +C G ++ ++ LDQM
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
R PNE TY L G + EA+ +++ + + S Y +I C GK
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
A +L +M + G +PD +YS+++ G C ++EAL + M E KPD +++L+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
G C+ RRT + ++++ M+ G P+E TYT L+ + +LE K LQL +
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE------KALQLHNEMV 547
Query: 551 ESAVERLVMQY 561
E V V+ Y
Sbjct: 548 EKGVLPDVVTY 558
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 218/442 (49%), Gaps = 19/442 (4%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
++ + A + M+ G P V+ T+L++ +CKA M +A++ ++ M G+ P+
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+YT LV+ +KG + A +++ +M D G+ + VTYN+L+ G C+ G + ++ L+ +
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+KGL P+ +YS +L + V A+++ +++ KG KP+ ++Y+ L+ G C++ RT
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+EA + ++ G P+ +Y L+ + CMEG E+A +L EM P +VTY++L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I L +T A ++L ++ PS +Y+ +I CS + VV +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKG------ 614
Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
C G + EA + +S+ K + Y +I CR G +A+ L
Sbjct: 615 ------------FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
EM K GF + T +L++ L EG + E + V + + + L+ +
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHR 722
Query: 495 SRRTDLSLEVFQMMIEKGQMPN 516
D+ L+V M + G +PN
Sbjct: 723 EGNMDVVLDVLAEMAKDGFLPN 744
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 211/454 (46%), Gaps = 36/454 (7%)
Query: 78 KLNDAFLQ--LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
K N +F + + M+ P+V L+ C A + A+ + + M + G +P+ +
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
Y L++ CK + +L+ M G N ++YN ++ GLC G + + L +
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
++G + TY+ L++ KE H A+ + +++ G P++++Y L+ +CK G
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
A+ F + +G PN +Y L+ +G EA +L EM+ SP++VTYN LI
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
GK + A+ VL++M + P SY+ +++ C VD ++ +M + K
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
P+ TY+ L I C + +T +A L
Sbjct: 483 PDTITYSSL----------------------------------IQGFCEQRRTKEACDLY 508
Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
EM + G PD +TY++LI CMEG +E+AL++ M E PDV ++ L+ GL K
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
RT + + + + +P++ TY L+E ++
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 68/138 (49%)
Query: 103 NLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDY 162
+L+ C M +A +V E M+ PD ++Y +++ C+ G++ A L ++M
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
G+ +TVT +LV+ L G +N+ + +++ + A L+E ++E +
Sbjct: 670 GFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVV 729
Query: 223 MKLLDDIIAKGGKPNLVS 240
+ +L ++ G PN +S
Sbjct: 730 LDVLAEMAKDGFLPNGIS 747
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 234/455 (51%), Gaps = 2/455 (0%)
Query: 87 ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
++M KG ++ + ++ C+ K+ A M ++ G P+ +++ L+N LC +
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 147 GNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTY 206
G V A++LV++M + G+ + +T N+LV GLC+ G +++ +D++++ G PNA TY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 207 SFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS 266
+L K AM+LL + + K + V Y++++ GLCK G + A F ++
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 267 KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDH 326
KG N+++YNIL+ C GRW++ +LL +M +P +VT+++LI S GK
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM 386
A ++ EM+ P +Y +I C E +D + +D M + C PN T+N L
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 387 -LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
C ++ + + + + + + Y +I C GK A +L EM P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
+ TY L+ GLC G E+ALEIF +E+ + D+ +N ++ G+C + + D + ++F
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
+ KG P TY I++ G+ + L AE+L
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLS-EAELL 565
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 239/471 (50%), Gaps = 1/471 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R KL AF + +++ G++P+ + + L+ LC ++ +A+++++ MV G PD
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+ LVN LC G AM L++KM +YG N VTY ++ +C G +++ L ++
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++ + +A YS +++ K + A L +++ KG N+++YN+L+ G C GR
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
++ + RD+ + PNVV++++L+ S EG+ EA EL EM +P +TY L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I D A +++D MV P+ ++N +I C ++D ++ +M R
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
+ TYN L C +GK+ A + Q + +++ YK ++ LC G++ +A +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
+ ++ K D Y+ +I G+C +++A ++F + KP V +N ++ GLC
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
K + +F+ M E G P+ TY IL+ + S ++++EL+
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 236/475 (49%), Gaps = 3/475 (0%)
Query: 76 DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
D K +DA M+ P V+ + L + K + + + + M GI + +
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
+ ++NC C+ + A + K+ GY NT+T+++L+ GLC+ G ++++L+ +DR++
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
+ G P+ T + L+ AM L+D ++ G +PN V+Y +L +CK G+T
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
A+ R + + + + V Y+I++ LC G + A L EM+ + I+TYNILI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
G G+ D K+L +M+K + P+ +++ +I EGK+ + +M HR
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
P+ TY L C + +A ++ + +K + +I C+ + +L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
+M+ G D+ TY++LI+G C G + A E+F M P++ + LL GLC
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 495 SRRTDLSLEVFQMMIEKGQMPNET-TYTILVEGIAHQDELELSAEVLKELQLRQV 548
+ ++ +LE+F+ IEK +M + Y I++ G+ + +++ + ++ L L+ V
Sbjct: 486 NGESEKALEIFE-KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 179/377 (47%), Gaps = 1/377 (0%)
Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
+ ++ +I +P +S L A K + + L + KG NL + +++
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
+ C+ + A + G+EPN ++++ L+ LC+EGR EA EL+ M
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
P ++T N L+ L GK A+ ++D+MV+ +P+A +Y P++ +C G+ L ++
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
L +M R K + Y+ + LC G + AF + + K ++ Y +I C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
G+ +LL +M K P+ T+S LI EG + EA E+ M PD
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
+ +L+ G CK D + ++ +M+ KG PN T+ IL+ G + ++ E+ +++
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 544 QLRQVVSESAVERLVMQ 560
LR VV+++ ++Q
Sbjct: 430 SLRGVVADTVTYNTLIQ 446
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 156/289 (53%), Gaps = 1/289 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D+ ++ KL +A + M+ +G PD + T+L+ CK N + KA +++++MVS G
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ ++ L+N CK + ++L KM G +TVTYN+L++G C LG LN + +
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
++ + + PN TY LL+ A+++ + I + ++ YN+++ G+C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
+ ++A F LP KG +P V +YNI++ LC +G EA L +M+ +P T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
YNILI + G ++K+++E+ + F A++ +I L S+G++
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRL 628
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 225/437 (51%), Gaps = 1/437 (0%)
Query: 109 CKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNT 168
C+ K+ A M ++ G PD +++ L+N LC +G V A++LV++M + G+
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 169 VTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
+T N+LV GLC+ G ++ ++ +DR+++ G PN TY +L+ K AM+LL
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 229 IIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR 288
+ + K + V Y++++ GLCK+G + A F ++ KGF+ +++ Y L+R C GR
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 289 WEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNP 348
W++ +LL +M +P +V ++ LI GK A ++ EM++ P +Y
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 349 IIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQ 407
+I C E ++D LD M + C PN T+N L C + + + + + +
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
+ Y +I C GK A +L EM PD +Y L+ GLC G E+AL
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
EIF +E+ + D+ +N ++ G+C + + D + ++F + KG P+ TY I++ G+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 528 AHQDELELSAEVLKELQ 544
+ L + + ++++
Sbjct: 538 CKKGSLSEADLLFRKME 554
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 240/471 (50%), Gaps = 1/471 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R KL+ AF + +++ G++PD V + L+ LC ++ +A+++++ MV G P
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+ LVN LC G V A+ L+++M + G+ N VTY +++ +C G +++ L ++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++ + +A YS +++ K+ + A L +++ KG K +++ Y L+ G C GR
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
++ + RD+ + P+VV+++ L+ EG+ EA EL EM SP VTY L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I + D A +LD MV P+ ++N +I C +D ++ +M R
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
+ TYN L C +GK++ A + Q + +++ YK ++ LC G+ +A +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
+ ++ K D Y+ +I G+C +++A ++F + KPDV +N ++ GLC
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
K + +F+ M E G PN TY IL+ + + SA++++E++
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 210/434 (48%), Gaps = 3/434 (0%)
Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
K A+ + + M S P ++ L + + + + L ++ME G N T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
++ C L+ + + ++I+ G P+ T+S L+ E V A++L+D ++
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
G KP L++ N L+ GLC G+ +A+ + GF+PN V+Y +L+ +C G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
ELL +M+ V Y+I+I L G D+A + +EM F+ Y +I
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV--GKVQEAFAIIQSLGNKQNSS 410
C G+ D K L M R+ P+ ++ L + C V GK++EA + + + + S
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL-IDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
Y +I C++ + +A +L M G P+ T++ LI G C LI++ LE+F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
M D +N L+ G C+ + +++ E+FQ M+ + P+ +Y IL++G+
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 531 DELELSAEVLKELQ 544
E E + E+ ++++
Sbjct: 471 GEPEKALEIFEKIE 484
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 175/361 (48%), Gaps = 1/361 (0%)
Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
P +S L + + + L + KG NL + ++++ C+ + A
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAY 320
+ G+EP+ V+++ L+ LC+EGR EA EL+ M PT++T N L+ L
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 321 HGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGT 380
+GK A+ ++D MV+ F+P+ +Y P++ +C G+ L ++ L +M R+ K +
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 381 YNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
Y+ + LC G + AF + + K + Y +I C G+ +LL +M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
K TPD +S+LI EG + EA E+ M + PD + +L+ G CK + D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
+ + +M+ KG PN T+ IL+ G + ++ E+ +++ LR VV+++ ++
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 560 Q 560
Q
Sbjct: 430 Q 430
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 155/289 (53%), Gaps = 1/289 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D ++ KL +A + M+ +G PD V T+L+ CK N++ KA ++++MVS G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ ++ L+N CK + ++L KM G +TVTYN+L++G C LG L + +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
++ + + P+ +Y LL+ A+++ + I + ++ YN+++ G+C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
+ ++A F LP KG +P+V +YNI++ LC +G EA+ L +M+ SP T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
YNILI + G + K+++E+ + F A++ ++ L S+G++
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRL 612
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 157/339 (46%), Gaps = 37/339 (10%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D +D L++AF M KG K D++ T L+ C A + K++ M+ I
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
PD +++ L++C K+G + A +L ++M G +TVTY SL+ G C L+++
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKE---------------RGVHA-------------- 221
LD ++ KG PN T++ L+ K RGV A
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 222 ------AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
A +L +++++ +P++VSY +LL GLC G E+A+ F + E ++
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
YNI++ +C + ++A +L + P + TYNI+IG L G A + +M
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
+ P+ +YN +I EG K ++++ +RC
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI--KRC 591
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 151/316 (47%), Gaps = 1/316 (0%)
Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
VSY L + + ++A+ F+++ P ++ ++ L + +++ +L +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
M+ + + T +I+I K A + +++K + P +++ +I LC EG+
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY 417
V ++ +D+M KP T N L LC GKV +A +I + + Y
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 418 VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD 477
V+ +C+ G+T A +LL +M + D+ YS +I GLC +G ++ A +F ME
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 478 YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSA 537
+K D+ + L+ G C + R D ++ + MI++ P+ ++ L++ + +L +
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 538 EVLKELQLRQVVSESA 553
E+ KE+ R + ++
Sbjct: 338 ELHKEMIQRGISPDTV 353
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 251/559 (44%), Gaps = 74/559 (13%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K++DA MV P +V+ LL + K NK + I + E M + GI D +Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+NC C++ + A+ ++ KM GY + VT +SL+ G C ++ ++ +D++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG----- 252
G P+ FT++ L+ + A+ L+D ++ +G +P+LV+Y ++ GLCK G
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 253 ------------------------------RTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
E A+ F ++ +KG PNVV+YN L+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
LC GRW +A+ LL+ M +P +VT+N LI + GK A K+ +EM++ P
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
+YN +I C ++D + M + C PN TYN L C +V++ + +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 402 SLGNK---------------------------------QNSSPQEFYKYVIT--SLCRKG 426
+ + N P + Y I LC G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
K A + + K + + Y+++I G+C G + EA ++F + KPDV +N
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYN 539
Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
++ GLC R + ++F+ M E G +PN TY L+ + SAE++KE++
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 547 QVVSESAVERLVMQYDFEG 565
V +++ LV +G
Sbjct: 600 GFVGDASTISLVTNMLHDG 618
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D ++ KL +A E M+ + PD + L+ C N++ +A ++ + MVS +
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ +Y L+N CK V ++L +M G NTVTY ++++G G+ + +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
+++ + + TYS LL + A+ + + + N+ YN ++ G+CK
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ EA F L K P+VV+YN ++ LC + +EA++L +M P T
Sbjct: 516 AGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
YN LI + + +++ EM F A++ + ++ + +G++D
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLD 621
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 52/288 (18%)
Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
+L G P V S+ +LC G WE + A G R IL L+
Sbjct: 17 NLQGIGNPPTVPSF----FNLCGSGCWERS---FASASGDYRE-------ILRNRLSDII 62
Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
K D A+ + +MVK R PS +N +++ + K +LV+ +QM
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM------------- 109
Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAFQLLYEMTK 440
Q+LG + Y Y I CR+ + A +L +M K
Sbjct: 110 ------------------QTLG-----ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
G+ PD T SSL+ G C I +A+ + M E YKPD F L+ GL +
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 501 SLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
++ + M+++G P+ TY +V G+ + +++L+ +L +++ ++
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI 254
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 239/491 (48%), Gaps = 33/491 (6%)
Query: 77 HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
++++ A L M G P+ V L++ L K N++ +A++++E M G +PDA ++
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL----- 191
++ LCK + A ++V +M G+ + +TY L+ GLC +G ++ +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 192 ---------------------------DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK 224
D + G+VP+ TY+ L+ +KE V A++
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 225 LLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLC 284
+L D+ KG KPN+ SY +L+ G CK G+ +EA ++ + G +PN V +N L+ + C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 285 MEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
E R EA E+ EM P + T+N LI L + HAL +L +M+ +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSL 403
+YN +I G++ K +++M + +E TYN L LC G+V +A ++ + +
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
++ +I LCR G +A + EM G TPD T++SLI GLC G I
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
E+ L +F ++ PD FN L+ LCK + + IE G +PN T++IL
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 524 VEGIAHQDELE 534
++ I Q+ L+
Sbjct: 711 LQSIIPQETLD 721
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 241/479 (50%), Gaps = 6/479 (1%)
Query: 89 MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
M+S+ P + ++ C N++ A+ ++ M G +P++ Y L++ L K
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
V A+QL+E+M G + T+N ++ GLC +N++ + ++R++ +G P+ TY +
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL-PSK 267
L+ K V AA D+ + KP +V +N L+ G GR ++A D+ S
Sbjct: 328 LMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
G P+V +YN L+ EG A E+L +M P + +Y IL+ GK D A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AM 386
VL+EM +P+ +N +I+ C E ++ V+ +M + CKP+ T+N L +
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
LC V +++ A +++ + ++ + Y +I + R+G+ +A +L+ EM G D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
TY+SLI+GLC G +++A +F M + P + N L+ GLC+S + ++E +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
M+ +G P+ T+ L+ G+ +E + ++LQ + ++ +M + +G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 188/414 (45%), Gaps = 39/414 (9%)
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P SY ++ L A + M P T+ +++ C + ++ +L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
L + + G VPN+ Y L+ + K V+ A++LL+++ G P+ ++N ++ GLCK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
R EA + + +GF P+ ++Y L+ LC GR + A +L + P IV
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVI 355
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
+N LI HG+ D A VL +MV P +YN +I EG V L ++ L M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 370 FHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
++ CKPN +Y L + C+ GK
Sbjct: 416 RNKGCKPNVYSYTIL----------------------------------VDGFCKLGKID 441
Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
+A+ +L EM+ G P++ ++ LI C E I EA+EIF M KPDV FN+L+
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
GLC+ +L + + MI +G + N TY L+ + E++ + +++ E+
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 140/244 (57%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
++H++ +A M KG KPDV +L+ LC+ +++K A+ ++ M+S G++ +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y L+N ++G + A +LV +M G P + +TYNSL++GLC G ++++ +++
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++ G P+ + + L+ + V A++ +++ +G P++V++N L+ GLC+ GR
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
E+ + FR L ++G P+ V++N L+ LC G +A LL E P T++IL
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 315 IGSL 318
+ S+
Sbjct: 711 LQSI 714
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 94/217 (43%), Gaps = 16/217 (7%)
Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGV-------G 391
+R S Y +I +L + G+ + + L QM +EG ++ + G
Sbjct: 107 YRHSFDVYQVLIGKLGANGEFKTIDRLLIQM------KDEGIVFKESLFISIMRDYDKAG 160
Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKY-VITSLCRKGKTYQ-AFQLLYEMTKYGFTPDSYT 449
+ ++ + N + P F Y V+ + G ++ A + Y+M P +T
Sbjct: 161 FPGQTTRLMLEMRNVYSCEPT-FKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219
Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
+ +++ C I+ AL + M ++ P+ + L+ L K R + +L++ + M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
G +P+ T+ ++ G+ D + +A+++ + +R
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 229 bits (583), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 249/538 (46%), Gaps = 71/538 (13%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K++DA MV P +V+ LL + K NK + I + E M + GI D +Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+NC C++ + A+ ++ KM GY + VT +SL+ G C ++ ++ +D++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG----- 252
G P+ FT++ L+ + A+ L+D ++ +G +P+LV+Y ++ GLCK G
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 253 ------------------------------RTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
++A+ F ++ +KG P+V +Y+ L+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
LC GRW +A+ LL++M +P +VT++ LI + GK A K+ DEM+K P
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
+Y+ +I C ++D + M + C PN TY+ L C +V+E + +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 402 SL------GN--------------KQNSSPQEFYKYVIT---------------SLCRKG 426
+ GN + + Q +K +++ LC+ G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
K +A + + + PD YTY+ +I G+C G +E+ E+F + P+V +N
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
++ G C+ + + + + M E G +PN TY L+ + E SAE++KE++
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 211/440 (47%), Gaps = 36/440 (8%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+++DA +++MV G+KPD T L++ L NK +A+ +++ MV G PD +Y
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+VN LCK+G++ A+ L++KME + V YN+++ GLC +++ +L + K
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 198 GLVPNAFTYS-----------------------------------FLLEAAYKERGVHAA 222
G+ P+ FTYS L++A KE + A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
KL D++I + P++ +Y+ L+ G C R +EA F + SK PNVV+Y+ L++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
C R EE EL EM VTY LI D+A V +MV P+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQ 401
+YN ++ LC GK+ + + + +P+ TYN + +C GKV++ + +
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
+L K S Y +I+ CRKG +A LL +M + G P+S TY++LIR +G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 462 LIEEALEIFVVMEEYDYKPD 481
E + E+ M + D
Sbjct: 588 DREASAELIKEMRSCGFAGD 607
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 175/372 (47%), Gaps = 3/372 (0%)
Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
++ ++ +++ P+ ++ LL A K + L + + G +L +Y++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
+ C+ + A+ + G+EP++V+ + LL C R +A L+ +M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
P T+ LI L H K A+ ++D+MV+ +P +Y ++ LC G +DL +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITS 421
L +M + + + YN + LC + +A + + NK P F Y +I+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISC 302
Query: 422 LCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
LC G+ A +LL +M + P+ T+S+LI EG + EA +++ M + PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 482 VDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
+ +++L+ G C R D + +F++MI K PN TY+ L++G +E E+ +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 542 ELQLRQVVSESA 553
E+ R +V +
Sbjct: 423 EMSQRGLVGNTV 434
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 148/290 (51%), Gaps = 1/290 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D ++ KL +A + M+ + PD+ ++L+ C +++ +A + E+M+S
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ +Y+ L+ CK V M+L +M G NTVTY +L+ G + + +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
+++ G+ PN TY+ LL+ K + AM + + + +P++ +YN+++ G+CK
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ E+ F +L KG PNV++YN ++ C +G EEA+ LL +M P T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
YN LI + G + + +++ EM F A++ ++ + +G++D
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 624
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 48/292 (16%)
Query: 263 DLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHG 322
+L G P V S+ +LC G WE + A G R IL L+
Sbjct: 17 NLQGIGNPPTVPSF----FNLCGSGCWERS---FASASGDYRE-------ILRNRLSDII 62
Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
K D A+ + +MVK R PS +N +++ + K +LV+ +QM
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM------------- 109
Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
Q+LG + Y I CR+ + A +L +M K G
Sbjct: 110 ------------------QTLGISHDLYT---YSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
+ PD T SSL+ G C I +A+ + M E YKPD F L+ GL + ++
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
+ M+++G P+ TY +V G+ + +++L+ +LK+++ ++ ++ +
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/559 (24%), Positives = 255/559 (45%), Gaps = 71/559 (12%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
KL++A MV P +V+ + LL + K K I E M G+ + +Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
++NCLC++ + +A+ ++ KM GY + VT NSL+ G C +++++ +D++++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEG----- 252
G P+ T++ L+ ++ A+ L++ ++ KG +P+LV+Y ++ GLCK G
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 253 ------------------------------RTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
++A+ F ++ +KG P+V +Y+ L+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
LC GRW +A+ LL++M +P +VT+N LI + A GK A K+ DEM++ P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQ 401
+YN +I C ++D + M + C P+ TYN L C KV + + +
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 402 SLGNK--------------------QNSSPQEFYKYVIT---------------SLCRKG 426
+ + + Q +K +++ LC+ G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
K +A + + K PD YTY+ + G+C G +E+ ++F + KPDV +N
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
++ G CK + + +F M E G +P+ TY L+ + SAE++KE++
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584
Query: 547 QVVSESAVERLVMQYDFEG 565
+ +++ LV +G
Sbjct: 585 RFAGDASTYGLVTDMLHDG 603
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 227/461 (49%), Gaps = 6/461 (1%)
Query: 77 HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
+++++A +++MV G++PD V T L++ L + NK +A+ ++E MV G PD +Y
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
++N LCK+G A+ L+ KME + V Y++++ LC +++ +L +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
KG+ P+ FTYS L+ A +LL D++ + PN+V++N L+ KEG+ E
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
A + F ++ + +PN+V+YN L+ CM R +EA ++ M D P +VTYN LI
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
K +++ +M + + +Y +I D QM P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITS--LCRKGKTYQAFQ 433
N TYN L LC GK+++A + + L K P + Y Y I S +C+ GK +
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYL-QKSKMEP-DIYTYNIMSEGMCKAGKVEDGWD 506
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
L ++ G PD Y+++I G C +GL EEA +F+ M+E PD +N L+
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
+ S E+ + M + +TY LV + H L+
Sbjct: 567 RDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLD 606
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 146/290 (50%), Gaps = 1/290 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D ++ KL +A + M+ + P++V +L+ C +++ +A ++ +MVS +
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
PD +Y L+N CK V M+L M G NTVTY +L+ G + + +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
+++ G+ PN TY+ LL+ K + AM + + + +P++ +YN++ G+CK
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ E+ F L KG +P+V++YN ++ C +G EEA L +M P T
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
YN LI + G + +++ EM RF A++Y ++ + +G++D
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLD 606
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 149/320 (46%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+ +DA L M+ + P+VV +L+ K K+ +A K+ + M+ I P+ +Y
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+N C + A Q+ M + VTYN+L+ G C + ++ + ++
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
GLV N TY+ L+ ++ A + +++ G PN+++YN LL GLCK G+ E+A
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ F L EP++ +YNI+ +C G+ E+ +L + P ++ YN +I
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
G + A + +M + P + +YN +I +G + + +M R +
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Query: 378 EGTYNGLAMLCGVGKVQEAF 397
TY + + G++ + F
Sbjct: 590 ASTYGLVTDMLHDGRLDKGF 609
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 36/306 (11%)
Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIV----------------------------- 309
L R+ + + +EA +L EM P+IV
Sbjct: 36 LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95
Query: 310 ------TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
TYNI+I L + AL +L +M+K + PS + N ++ C ++ V
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
+DQM +P+ T+ L L K EA A+++ + K Y VI L
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
C++G+ A LL +M K D YS++I LC +++AL +F M+ +PDV
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
+++L+ LC R + + M+E+ PN T+ L++ A + +L + ++ E
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 543 LQLRQV 548
+ R +
Sbjct: 336 MIQRSI 341
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 240/457 (52%), Gaps = 12/457 (2%)
Query: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDASSYT 137
L+ A E+MV G V +++ CK +++ A+ + EM G PD ++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
LVN LCK G+V +A+++++ M GY + TYNS++ GLC LG + ++++ LD++I +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
PN TY+ L+ KE V A +L + +KG P++ ++N L+ GLC A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ F ++ SKG EP+ +YN+L+ SLC +G+ +EA +L +M+ + +++TYN LI
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
KT A ++ DEM ++ +YN +I LC +V+ + +DQM KP+
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 378 EGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
+ TYN L C G +++A I+Q++ + Y +I+ LC+ G+ A +LL
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKS 495
+ G + Y+ +I+GL + EA+ +F M E+ + PD ++ + GLC
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG 659
Query: 496 -----RRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
D +E ++EKG +P ++ +L EG+
Sbjct: 660 GGPIREAVDFLVE----LLEKGFVPEFSSLYMLAEGL 692
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 253/507 (49%), Gaps = 20/507 (3%)
Query: 45 LASTQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNL 104
LAS + SP+ ++Y + + G R +D LE M S + L
Sbjct: 72 LASKKPNFSPEPALYEEILLRLG-------RSGSFDDMKKILEDMKSSRCEMGTSTFLIL 124
Query: 105 LYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLVE----KM 159
+ + + + V++ M+ G+ PD Y ++N L G +++LVE KM
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD----GNSLKLVEISHAKM 180
Query: 160 EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV 219
+G + T+N L++ LC L ++ L+ + GLVP+ T++ +++ +E +
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 220 HAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNI 278
A+++ + ++ G + VS NV++ G CKEGR E+A+ F +++ ++ GF P+ ++N
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
L+ LC G + A E++ M P + TYN +I L G+ A++VLD+M+
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
P+ +YN +I+ LC E +V+ + + + P+ T+N L LC + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 398 AIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRG 456
+ + + +K P EF Y +I SLC KGK +A +L +M G TY++LI G
Sbjct: 421 ELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
C EA EIF ME + + +N L+ GLCKSRR + + ++ MI +GQ P+
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 517 ETTYTILVEGIAHQDELELSAEVLKEL 543
+ TY L+ +++ +A++++ +
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAM 566
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 183/393 (46%), Gaps = 41/393 (10%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
++ +A L++M+++ P+ V L+ LCK N++++A ++ ++ S GI+PD ++
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+ LC N AM+L E+M G + TYN L+ LC G L+++L L ++
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G + TY+ L++ K A ++ D++ G N V+YN L+ GLCK R E+A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ + +G +P+ +YN LL C G ++A +++ M P IVTY LI
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
L G+ + A K+L + + +YNP+I L F +R
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL----------------FRKR---- 624
Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCR-KGKTYQAFQLL 435
K EA + + + + + P Y+ V LC G +A L
Sbjct: 625 --------------KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE 468
E+ + GF P+ +SSL + EGL+ ++E
Sbjct: 671 VELLEKGFVPE---FSSLY--MLAEGLLTLSME 698
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 247/495 (49%), Gaps = 5/495 (1%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK-VMEMMVSSGIIPDA 133
R +L+ F L ++ KG + D + T LL LC + A+ V+ M G IP+
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMED---YGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
SY L+ LC + A++L+ M D G P + V+Y +++ G G+ +++
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
++ +G++P+ TY+ ++ A K + + AM++L+ ++ G P+ ++YN +L G C
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ +EAI F + + S G EP+VV+Y++L+ LC GR EA ++ M P I T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
Y L+ A G +LD MV+ P ++ +I +GKVD + +M
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398
Query: 371 HRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
+ PN TY + +LC G+V++A + + ++ S Y +I LC K
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
+A +L+ EM G ++ ++S+I C EG + E+ ++F +M KP+V +N L+
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
G C + + D ++++ M+ G PN TY+ L+ G +E + + KE++ V
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578
Query: 550 SESAVERLVMQYDFE 564
+ +++Q F+
Sbjct: 579 PDIITYNIILQGLFQ 593
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 244/485 (50%), Gaps = 9/485 (1%)
Query: 76 DHKLNDAF-LQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMV---SSGIIP 131
D + +DA + L RM G P+V LL LC N+ ++A++++ MM G P
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
D SYT ++N K+G+ A +M D G + VTYNS++ LC ++++++ L
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
+ +++ G++P+ TY+ +L A+ L + + G +P++V+Y++L+ LCK
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
GR EA + F + +G +P + +Y LL+ +G E + LL M P +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
+ILI + A GK D A+ V +M + P+A +Y +I LC G+V+ + +QM
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 372 RRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
P YN L LC K + A +I + ++ F+ +I S C++G+ +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494
Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
+ +L M + G P+ TY++LI G C+ G ++EA+++ M KP+ ++ L+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVS 550
G CK R + +L +F+ M G P+ TY I+++G+ KEL +R S
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR----TAAAKELYVRITES 610
Query: 551 ESAVE 555
+ +E
Sbjct: 611 GTQIE 615
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 229/461 (49%), Gaps = 1/461 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
+ ++ A L MV G PD + ++L+ C + + K+AI ++ M S G+ PD
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVV 302
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y+ L++ LCK G A ++ + M G TY +L++G G L + LD +
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++ G+ P+ + +S L+ A K+ V AM + + +G PN V+Y ++ LCK GR
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
E+A+ +F + +G P + YN L+ LC +WE A EL+ EM + +N +
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I S G+ + K+ + MV+ +P+ +YN +I C GK+D +K L M
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
KPN TY+ L C + ++++A + + + + S Y ++ L + +T A +
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
L +T+ G + TY+ ++ GLC L ++AL++F + D K + FN ++ L
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
K R D + ++F G +PN TY ++ E I Q LE
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 185/381 (48%), Gaps = 1/381 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
+ K++ A L +M +G P+ V ++ LCK+ +++ A+ E M+ G+ P
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
Y L++ LC A +L+ +M D G NT+ +NS++ C G + +S + + +
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++ G+ PN TY+ L+ + AMKLL +++ G KPN V+Y+ L+ G CK R
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
E+A+ F+++ S G P++++YNI+L+ L R A EL + + TYNI+
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
+ L + TD AL++ + + A ++N +I L G+ D
Sbjct: 623 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
PN TY +A + G G ++E + S+ + + +++ L ++G+ +A
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 742
Query: 434 LLYEMTKYGFTPDSYTYSSLI 454
L + + F+ ++ T S I
Sbjct: 743 YLSMIDEKHFSLEASTASLFI 763
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 161/388 (41%), Gaps = 75/388 (19%)
Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM---------- 285
P+L +Y +L+ C+ GR + ++ KGF + +++ LL+ LC
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 286 --------------------------EGRWEEANELL---AEMDGGDRSPTIVTYNILIG 316
E R +EA ELL A+ GG P +V+Y +I
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
G +D A EM+ P +YN IIA LC +D ++ L+ M P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 377 NEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
+ TYN L C G+ +EA ++ + + Y ++ LC+ G+ +A ++
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 436 YEMTKYGFTPDSYTYSSLIRG--------------------------------LCM---E 460
MTK G P+ TY +L++G +C +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 461 GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTY 520
G +++A+ +F M + P+ + A++ LCKS R + ++ F+ MI++G P Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 521 TILVEGIAHQDELELSAEVLKELQLRQV 548
L+ G+ ++ E + E++ E+ R +
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 13/281 (4%)
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL-----LAEMDGGDRSPTIV 309
E+A F +L +G ++ N R+L R A + +A + +P +
Sbjct: 32 EDARHVFDELLRRGRGASIYGLN---RALADVARDSPAAAVSRYNRMARAGADEVTPDLC 88
Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV-DLVVKCLDQ 368
TY ILIG G+ D L ++K FR A ++ P++ LC++ + D + L +
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 369 MFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLG-NKQNSSPQEFYKY--VITSLCR 424
M C PN +YN L LC + QEA ++ + ++ SP + Y VI +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDN 484
+G + +A+ +EM G PD TY+S+I LC +++A+E+ M + PD
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 485 FNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
+N++L G C S + ++ + M G P+ TY++L++
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 1/288 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D+ ++ ++ ++ E MV G KP+V+ L+ C A KM +A+K++ MVS G+
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ +Y+ L+N CK + A+ L ++ME G + +TYN +++GL + +
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
R+ + G TY+ +L K + A+++ ++ K ++N+++ L K
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
GR +EA F S G PN +Y ++ ++ +G EE ++L M+ +
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 723
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
N ++ L G+ A L + + F A++ + I L S GK
Sbjct: 724 LNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI-DLLSGGK 770
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 229/477 (48%), Gaps = 17/477 (3%)
Query: 72 TRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIP 131
TR RD KLNDA MV P +V LL + K K I + + M GI
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
D ++ ++NC C V A+ ++ KM GY + VT SLV G C ++ ++ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
D++++ G P+ Y+ ++++ K + V+ A +I KG +PN+V+Y L+ GLC
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
R +A R D+ K PNV++Y+ LL + G+ EA EL EM P IVTY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
+ LI L H + D A ++ D MV SYN +I C +V+ +K +M
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 372 RRCKPNEGTYN----GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKG 426
R N TYN G V K QE F+ + G SP + Y ++ LC G
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG----ISPDIWTYNILLGGLCDNG 414
Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
+ +A + +M K D TY+++IRG+C G +EEA +F + KPD+ +
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
++ GLC ++ M ++G M N+ T L +G ++ LSAE++K++
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT---LSDG-----DITLSAELIKKM 523
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 205/434 (47%), Gaps = 34/434 (7%)
Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
K+ AI + MV S P + L++ + K + L +KME G + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
++ C ++ +L L ++++ G P+ T L+ + V A+ L+D ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
G KP++V+YN ++ LCK R +A FF+++ KG PNVV+Y L+ LC RW +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
LL++M +P ++TY+ L+ + +GK A ++ +EMV+ P +Y+ +I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
LC ++D + D M + C + +YN L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTL---------------------------- 336
Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
I C+ + +L EM++ G ++ TY++LI+G G +++A E F
Sbjct: 337 ------INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
M+ + PD+ +N LL GLC + + +L +F+ M ++ + TYT ++ G+ +
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 533 LELSAEVLKELQLR 546
+E + + L L+
Sbjct: 451 VEEAWSLFCSLSLK 464
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 150/287 (52%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D+ + ++NDAF + + KG +P+VV T L+ LC +++ A +++ M+ I
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ +Y+ L++ K G V A +L E+M + VTY+SL+ GLC+ ++++ Q
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
D ++ KG + + +Y+ L+ K + V MKL ++ +G N V+YN L+ G +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G ++A FF + G P++ +YNILL LC G E+A + +M + IVT
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
Y +I + GK + A + + +P +Y +++ LC++G
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 1/320 (0%)
Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
++ + +AI F D+ P++V +N LL ++ +++ L +M+ +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
T+NI+I + AL +L +M+K + P + ++ C +V V +D+M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
KP+ YN + LC +V +AF + + K Y ++ LC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
A +LL +M K TP+ TYS+L+ G + EA E+F M PD+ +++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
+ GLC R D + ++F +M+ KG + + +Y L+ G +E ++ +E+ R +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 549 VSESAVERLVMQYDFEGIEV 568
VS + ++Q F+ +V
Sbjct: 362 VSNTVTYNTLIQGFFQAGDV 381
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+L A + E M + D+V T ++ +CK K+++A + + G+ PD +YT
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 138 YLVNCLCKKG---------------------------NVGYAMQLVEKMEDYGYP 165
+++ LC KG ++ + +L++KM GY
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYA 529
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 239/470 (50%), Gaps = 1/470 (0%)
Query: 76 DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
D K +DA + M+ P +V + + + + + + + +GI + +
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
++NC C+ +A ++ K+ GY +T T+N+L++GL + G +++++ +DR++
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
+ G P+ TY+ ++ + A+ LL + + K ++ +Y+ ++ LC++G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
AI F+++ +KG + +VV+YN L+R LC G+W + LL +M + P ++T+N+L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
GK A ++ EM+ P+ +YN ++ C + ++ LD M +C
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
P+ T+ L C V +V + + +++ + + Y ++ C+ GK A +L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
EM +G PD TY L+ GLC G +E+ALEIF +++ + + ++ G+CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
+ + + +F + KG PN TYT+++ G+ + L + +L++++
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 233/486 (47%), Gaps = 38/486 (7%)
Query: 82 AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
A+ L +++ G++PD L+ L K+ +A+ +++ MV +G PD +Y +VN
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
+C+ G+ A+ L+ KME+ + TY++++ LC G ++ ++ + KG+
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
+ TY+ L+ K + LL D++++ PN++++NVLL KEG+ +EA +
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
+++ ++G PN+++YN L+ CM+ R EAN +L M SP IVT+ LI
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
+ D +KV + K +A +Y+ ++ C GK+ L + +M P+ TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 382 NGLAM--LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
G+ + LC GK+++A I + L + Y +I +C+ GK A+ L +
Sbjct: 442 -GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
G P+ TY+ +I GLC +G + EA N LL
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEA-------------------NILL---------- 531
Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVM 559
+ M E G PN+ TY L+ +L SA++++E++ ++++ ++V+
Sbjct: 532 ------RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Query: 560 QYDFEG 565
G
Sbjct: 586 DMLLSG 591
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 203/413 (49%), Gaps = 36/413 (8%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K+++A + ++RMV G +PDVV +++ +C++ A+ ++ M + D +Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+++ LC+ G + A+ L ++ME G ++ VTYNSLVRGLC G N L ++ +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
+VPN T++ LL+ KE + A +L ++I +G PN+++YN L+ G C + R EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 258 -----------------------------------IRFFRDLPSKGFEPNVVSYNILLRS 282
++ FR++ +G N V+Y+IL++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
C G+ + A EL EM P ++TY IL+ L +GK + AL++ +++ K +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQ 401
Y II +C GKV+ + + KPN TY ++ LC G + EA +++
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 402 SLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
+ N+ Y +I + R G + +L+ EM GF+ D+ + +I
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 162/314 (51%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D+ RD ++ A + M +KG K VV +L+ LCKA K +++ MVS I+
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ ++ L++ K+G + A +L ++M G N +TYN+L+ G CM L+++
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
LD +++ P+ T++ L++ + V MK+ +I +G N V+Y++L+ G C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ + A F+++ S G P+V++Y ILL LC G+ E+A E+ ++ IV
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
Y +I + GK + A + + +P+ +Y +I+ LC +G + L +M
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 371 HRRCKPNEGTYNGL 384
PN+ TYN L
Sbjct: 536 EDGNAPNDCTYNTL 549
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 149/290 (51%), Gaps = 1/290 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D ++ KL +A + M+++G P+++ L+ C N++ +A ++++MV +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
PD ++T L+ C V M++ + G N VTY+ LV+G C G + + +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
++ G++P+ TY LL+ + A+++ +D+ +V Y ++ G+CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ E+A F LP KG +PNV++Y +++ LC +G EAN LL +M+ +P T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
YN LI + G + K+++EM F A+S +I L S G++D
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GELD 594
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 34/296 (11%)
Query: 253 RTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
+ ++AI F+++ P++V ++ ++ ++ + +++ + I T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
I+I KT A VL +++K + P ++N +I L EGKV V +D+M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
C+P+ TYN ++ +CR G T A
Sbjct: 188 GCQPDVVTYNS----------------------------------IVNGICRSGDTSLAL 213
Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
LL +M + D +TYS++I LC +G I+ A+ +F ME K V +N+L+ GL
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
CK+ + + + + M+ + +PN T+ +L++ + +L+ + E+ KE+ R +
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 7/231 (3%)
Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
K D A+ + EM++ R PS ++ + + + +LV+ Q+ N T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 383 GLA-MLCGVGKVQEAFAI---IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
+ C K A+++ + LG + +++ + +I L +GK +A L+ M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTT---FNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
+ G PD TY+S++ G+C G AL++ MEE + K DV ++ ++ LC+
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
D ++ +F+ M KG + TY LV G+ + A +LK++ R++V
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 232/472 (49%), Gaps = 1/472 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
KL+DA MV P + + LL + K K I + E M GI + +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+NC C++ + A+ L+ KM GY + VT +SL+ G C ++ ++ +D++++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G P+ T++ L+ + A+ L+D ++ +G +PNLV+Y V++ GLCK G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ + E NVV Y+ ++ SLC ++A L EM+ P ++TY+ LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
L + + A ++L +M++ + P+ ++N +I EGK+ K D+M R P+
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
TY+ L C ++ EA + + + +K Y +I C+ + + +L
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
EM++ G ++ TY++LI G + A +F M P++ +N LL GLCK+
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
+ + ++ VF+ + P TY I++EG+ ++E ++ L L+ V
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 217/449 (48%), Gaps = 7/449 (1%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R +++ A L +M+ G++P +V ++LL C ++ A+ +++ MV G PD
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
++T L++ L A+ LV++M G N VTY +V GLC G+++ + L+++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+ N YS ++++ K R A+ L ++ KG +PN+++Y+ L++ LC R
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+A R D+ + PNVV++N L+ + EG+ EA +L EM P I TY+ L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I H + D A + + M+ P+ +YN +I C ++D V+ +M R
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 375 KPNEGTY----NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
N TY +G Q F + S G N Y ++ LC+ GK +
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT---YNTLLDGLCKNGKLEK 488
Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
A + + + P YTY+ +I G+C G +E+ ++F + KPDV +N ++
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
G C+ + + +F+ M E G +P+ T
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 191/417 (45%), Gaps = 36/417 (8%)
Query: 163 GYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAA 222
+ + + Y ++R L+ ++ +++ +P+ F ++ LL A K +
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 223 MKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
+ L + + G NL +YN+L+ C+ + A+ + G+EP++V+ + LL
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPS 342
C R +A L+ +M P +T+ LI L H K A+ ++D MV+ +P+
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 343 AASYNPIIARLCSEGKVDLVVKCLDQM---------------FHRRCK------------ 375
+Y ++ LC G +DL L++M CK
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 376 --------PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
PN TY+ L + LC + +A ++ + ++ + + +I + ++G
Sbjct: 285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
K +A +L EM K PD +TYSSLI G CM ++EA +F +M D P+V +N
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
L+ G CK++R D +E+F+ M ++G + N TYT L+ G + + + V K++
Sbjct: 405 TLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 136/316 (43%), Gaps = 15/316 (4%)
Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
G P + ++ L G+C GR F Y +LR+ + ++A
Sbjct: 25 GNPRIAPSSIDLCGMCYWGR--------------AFSSGSGDYREILRNGLHSMKLDDAI 70
Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
L M P+I +N L+ ++A K D + + ++M + + +YN +I
Sbjct: 71 GLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
C ++ L + L +M +P+ T + L C ++ +A A++ +
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
+ +I L K +A L+ M + G P+ TY ++ GLC G I+ A +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
ME + +V ++ ++ LCK R D +L +F M KG PN TY+ L+ + + +
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 533 LELSAEVLKELQLRQV 548
++ +L ++ R++
Sbjct: 311 WSDASRLLSDMIERKI 326
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 49/299 (16%)
Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
R+L KG P + +I L +C GR + GD Y ++ + +
Sbjct: 19 RNLQGKG-NPRIAPSSIDLCGMCYWGRAFSSGS-------GD-------YREILRNGLHS 63
Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY 381
K D A+ + MVK R PS +N +++ + K DLV+ ++M
Sbjct: 64 MKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM------------ 111
Query: 382 NGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
Q LG N Y +I CR+ + A LL +M K
Sbjct: 112 -------------------QRLGISHNLYT---YNILINCFCRRSQISLALALLGKMMKL 149
Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLS 501
G+ P T SSL+ G C I +A+ + M E Y+PD F L+ GL + +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 502 LEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQ 560
+ + M+++G PN TY ++V G+ + +++L+ +L +++ ++ + + V+
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 228/466 (48%), Gaps = 2/466 (0%)
Query: 89 MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
+ +KG P LL L +AN+ +K + ++ V G+ PD +T +N CK G
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV-VCKGVSPDVYLFTTAINAFCKGGK 288
Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
V A++L KME+ G N VT+N+++ GL M G +++ F ++++++G+ P TYS
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
L++ + + + A +L ++ KG PN++ YN L+ + G +AI + SKG
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
+YN L++ C G+ + A LL EM + ++ +I L H D AL
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468
Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
+ + EM+ P +I+ LC GK ++ Q ++ + T N L L
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
C GK+ EAF I + + + + Y +I+ C K K +AF L EM K G PD+
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588
Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
YTYS LI GL +EEA++ + + PDV ++ ++ G CK+ RT+ E F
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 648
Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
M+ K PN Y L+ L ++ E+ ++++ + + SA
Sbjct: 649 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 227/478 (47%), Gaps = 34/478 (7%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R ++ DA+ L+ M KG P+V+ NL+ +A + KAI++ ++MVS G+ +S
Sbjct: 355 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 414
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y L+ CK G A +L+++M G+ N ++ S++ LC + +L+F+ +
Sbjct: 415 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 474
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+ + + P + L+ K A++L + KG + + N LL GLC+ G+
Sbjct: 475 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 534
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+EA R +++ +G + VSYN L+ C + + +EA L EM P TY+IL
Sbjct: 535 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 594
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I L K + A++ D+ + P +Y+ +I C + + + D+M +
Sbjct: 595 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 654
Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
+PN YN ++I + CR G+ A +L
Sbjct: 655 QPNTVVYN----------------------------------HLIRAYCRSGRLSMALEL 680
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
+M G +P+S TY+SLI+G+ + +EEA +F M +P+V ++ AL+ G K
Sbjct: 681 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 740
Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
+ + + M K PN+ TYT+++ G A + ++ +L E++ + +V +S
Sbjct: 741 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 192/414 (46%), Gaps = 38/414 (9%)
Query: 77 HKLNDAFLQ-LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
H + D+ L+ + M+ + P T L+ LCK K KA+++ ++ G + D +
Sbjct: 461 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 520
Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
L++ LC+ G + A ++ +++ G + V+YN+L+ G C L+++ FLD ++
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
++GL P+ +TYS L+ + V A++ DD G P++ +Y+V++ G CK RTE
Sbjct: 581 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 640
Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
E FF ++ SK +PN V YN L+R+ C GR A EL +M SP TY LI
Sbjct: 641 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
++ + + A + +EM P+ Y +I G++ V L +M +
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 760
Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
PN+ TY +I R G +A +LL
Sbjct: 761 PNKITYT----------------------------------VMIGGYARDGNVTEASRLL 786
Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
EM + G PDS TY I G +G + LE F +E +Y ++ +N L+
Sbjct: 787 NEMREKGIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLI 837
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R +L+ A E M KG P+ T+L+ + +++++A + E M G+ P+
Sbjct: 670 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 729
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
YT L++ K G + L+ +M N +TY ++ G GN+ ++ + L+ +
Sbjct: 730 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDD 228
+KG+VP++ TY + K+ GV A K D+
Sbjct: 790 REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 232/453 (51%), Gaps = 1/453 (0%)
Query: 93 GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYA 152
G + D+ T ++ C+ K+ A V+ G PD +++ LVN C +G V A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 153 MQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEA 212
+ LV++M + + VT ++L+ GLC+ G ++++L +DR+++ G P+ TY +L
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 213 AYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPN 272
K A+ L + + K ++V Y++++ LCK+G ++A+ F ++ KG + +
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 273 VVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLD 332
VV+Y+ L+ LC +G+W++ ++L EM G + P +VT++ LI GK A ++ +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 333 EMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVG 391
EM+ P +YN +I C E + + D M + C+P+ TY+ L C
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
+V + + + + +K Y ++ C+ GK A +L EM G P TY
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
L+ GLC G + +ALEIF M++ + +N ++ G+C + + D + +F + +K
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 512 GQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
G P+ TY +++ G+ + L + + ++++
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 245/487 (50%), Gaps = 1/487 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R KL AF L R G++PD + + L+ C ++ +A+ +++ MV PD
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+ + L+N LC KG V A+ L+++M +YG+ + VTY ++ LC GN +L ++
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++ + + YS ++++ K+ A+ L +++ KG K ++V+Y+ L+ GLC +G+
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
++ + R++ + P+VV+++ L+ EG+ EA EL EM +P +TYN L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I A ++ D MV P +Y+ +I C +VD ++ ++ +
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
PN TYN L + C GK+ A + Q + ++ Y ++ LC G+ +A +
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
+ +M K T Y+ +I G+C +++A +F + + KPDV +N ++ GLC
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
K + +F+ M E G P++ TY IL+ L S E+++E+++ ++S+
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596
Query: 554 VERLVMQ 560
++V+
Sbjct: 597 TIKMVID 603
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 219/427 (51%), Gaps = 4/427 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
++++A + ++RMV G +PD V +L LCK+ A+ + M I Y+
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+++ LCK G+ A+ L +ME G + VTY+SL+ GLC G + + L +I +
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
++P+ T+S L++ KE + A +L +++I +G P+ ++YN L+ G CKE EA
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ F + SKG EP++V+Y+IL+ S C R ++ L E+ P +TYN L+
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
GK + A ++ EMV PS +Y ++ LC G+++ ++ ++M R
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
G YN + +C KV +A+++ SL +K Y +I LC+KG +A L
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 437 EMTKYGFTPDSYTYSSLIRG-LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
+M + G TPD +TY+ LIR L GLI ++E+ M+ + D +++ +
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTIK-MVIDMLSD 607
Query: 496 RRTDLSL 502
RR D S
Sbjct: 608 RRLDKSF 614
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 226/469 (48%), Gaps = 34/469 (7%)
Query: 76 DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
D K+NDA E M+ P + L + + + + + M +GI D +
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
T ++NC C+K + +A ++ + GY +T+T+++LV G C+ G +++++ +DR++
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
+ P+ T S L+ + V A+ L+D ++ G +P+ V+Y +L LCK G +
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
A+ FR + + + +VV Y+I++ SLC +G +++A L EM+ +VTY+ LI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
G L GK D K+L EM+ P +++ +I EGK+ + ++M R
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 376 PNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
P+ TYN L I C++ ++A Q+
Sbjct: 348 PDTITYNSL----------------------------------IDGFCKENCLHEANQMF 373
Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
M G PD TYS LI C +++ + +F + P+ +N L+LG C+S
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
+ + + E+FQ M+ +G P+ TY IL++G+ EL + E+ +++Q
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 165/326 (50%), Gaps = 2/326 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D+ +D +DA M KG K DVV ++L+ LC K K++ M+ II
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
PD +++ L++ K+G + A +L +M G +T+TYNSL+ G C L+++ Q
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
D ++ KG P+ TYS L+ + K + V M+L +I +KG PN ++YN L+ G C+
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ A F+++ S+G P+VV+Y ILL LC G +A E+ +M + I
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
YNI+I + K D A + + +P +YN +I LC +G + +M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 371 HRRCKPNEGTYNGL--AMLCGVGKVQ 394
C P++ TYN L A L G G +
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLIS 578
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSL--GNKQNSSPQEFY 415
KV+ + + M R P +N LC + + ++ G + N + Y
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFN---RLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106
Query: 416 K--YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
+I CRK K AF +L K G+ PD+ T+S+L+ G C+EG + EA+ + M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
E +PD+ + L+ GLC R +L + M+E G P+E TY ++ +
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 534 ELSAEVLKELQLRQV 548
L+ ++ ++++ R +
Sbjct: 227 ALALDLFRKMEERNI 241
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 226/435 (51%), Gaps = 7/435 (1%)
Query: 136 YTYLVNCLCKKGNVGYAMQL-VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
Y L+N L + G V Q+ +E +ED P N TYN +V G C LGN+ ++ Q++ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCP-NIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++ GL P+ FTY+ L+ + + + +A K+ +++ KG + N V+Y L+ GLC R
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+EA+ F + P V +Y +L++SLC R EA L+ EM+ P I TY +L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I SL K + A ++L +M++ P+ +YN +I C G ++ V ++ M R+
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
PN TYN L V +A ++ + ++ Y +I CR G A++L
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
L M G PD +TY+S+I LC +EEA ++F +E+ P+V + AL+ G CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE---LSAEVLKELQLRQVVSE 551
+ + D + + + M+ K +PN T+ L+ G+ +L+ L E + ++ L+ VS
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 552 SA--VERLVMQYDFE 564
+ RL+ DF+
Sbjct: 605 DTILIHRLLKDGDFD 619
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 232/478 (48%), Gaps = 21/478 (4%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
L +M+ KG P+V+ L+ CK ++ A+ V+E+M S + P+ +Y L+ CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
NV AM ++ KM + + VTYNSL+ G C GN + + + L + +GLVP+ +T
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
Y+ ++++ K + V A L D + KG PN+V Y L+ G CK G+ +EA +
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
SK PN +++N L+ LC +G+ +EA L +M PT+ T ILI L G D
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
HA +M+ +P A +Y I C EG++ + +M P+ TY+ L
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 386 MLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC------RKGKTYQ-------- 430
G +G+ AF +++ + + Q + +I L +KG +
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 431 ----AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD-YKPDVDNF 485
+LL +M ++ TP++ +Y LI G+C G + A ++F M+ + P F
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 486 NALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
NALL CK ++ + + +V MI G +P + +L+ G+ + E E V + L
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 230/493 (46%), Gaps = 53/493 (10%)
Query: 80 NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYL 139
++A ++ M G KP++ T L+ LC K +KA +++ M+ G++P+ +Y L
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 140 VNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
+N CK+G + A+ +VE ME NT TYN L++G C N+++++ L++++++ +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKV 458
Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
+P+ TY+ L++ + +A +LL + +G P+ +Y ++ LCK R EEA
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
F L KG PNVV Y L+ C G+ +EA+ +L +M + P +T+N LI L
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEG 379
GK A + ++MVK +P+ ++ +I RL +G D QM KP+
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 380 TYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMT 439
TY I + CR+G+ A ++ +M
Sbjct: 639 TYTTF----------------------------------IQTYCREGRLLDAEDMMAKMR 664
Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR--- 496
+ G +PD +TYSSLI+G G A ++ M + +P F +L+ L + +
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 497 ---------------RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
D +E+ + M+E PN +Y L+ GI L ++ +V
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 542 ELQLRQVVSESAV 554
+Q + +S S +
Sbjct: 785 HMQRNEGISPSEL 797
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 213/444 (47%), Gaps = 3/444 (0%)
Query: 96 PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
P++ ++ CK +++A + + +V +G+ PD +YT L+ C++ ++ A ++
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
+M G N V Y L+ GLC+ +++++ ++ P TY+ L+++
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
A+ L+ ++ G KPN+ +Y VL+ LC + + E+A + KG PNV++
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
YN L+ C G E+A +++ M+ SP TYN LI A+ VL++M+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKML 454
Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQ 394
+ + P +YN +I C G D + L M R P++ TY + LC +V+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
EA + SL K + Y +I C+ GK +A +L +M P+S T+++LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
GLC +G ++EA + M + +P V L+ L K D + FQ M+ G
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 515 PNETTYTILVEGIAHQDELELSAE 538
P+ TYT ++ + L L AE
Sbjct: 635 PDAHTYTTFIQTYCREGRL-LDAE 657
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 218/478 (45%), Gaps = 37/478 (7%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
+ ++V G PD T+L+ C+ + A KV M G + +YT+L++ LC
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 146 KGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
+ AM L KM +D +PT TY L++ LC +++L + + + G+ PN
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPT-VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
TY+ L+++ + A +LL ++ KG PN+++YN L+ G CK G E+A+ +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 265 PSKGFEPN----------------------------------VVSYNILLRSLCMEGRWE 290
S+ PN VV+YN L+ C G ++
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 291 EANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII 350
A LL+ M+ P TY +I SL + + A + D + + P+ Y +I
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 351 ARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNS 409
C GKVD L++M + C PN T+N L LC GK++EA + + +
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 410 SPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
+I L + G A+ +M G PD++TY++ I+ C EG + +A ++
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
M E PD+ +++L+ G +T+ + +V + M + G P++ T+ L++ +
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 230/485 (47%), Gaps = 20/485 (4%)
Query: 62 PNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM 121
PN + N + ++ A L +M+ + PDVV +L+ C++ A +++
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
+M G++PD +YT +++ LCK V A L + +E G N V Y +L+ G C
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
G ++++ L++++ K +PN+ T++ L+ + + A L + ++ G +P + +
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
+L+ L K+G + A F+ + S G +P+ +Y +++ C EGR +A +++A+M
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR--------- 352
SP + TY+ LI G+T+ A VL M PS ++ +I
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 353 ------LCSEGKV---DLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQS 402
LC+ + D VV+ L++M PN +Y L + +C VG ++ A +
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 403 LGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEG 461
+ + SP E + +++ C+ K +A +++ +M G P + LI GL +G
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 462 LIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYT 521
E +F + + Y D + ++ G+ K + E+F +M + G + TY+
Sbjct: 846 EKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYS 905
Query: 522 ILVEG 526
+L+EG
Sbjct: 906 LLIEG 910
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 332 DEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGV 390
DE + +++ YN ++ L G VD + + +M + PN TYN + C +
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231
Query: 391 GKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYT 449
G V+EA + + + P F Y +I C++ AF++ EM G +
Sbjct: 232 GNVEEANQYVSKIV-EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 450 YSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMI 509
Y+ LI GLC+ I+EA+++FV M++ + P V + L+ LC S R +L + + M
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 510 EKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
E G PN TYT+L++ + Q + E + E+L ++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 231/472 (48%), Gaps = 2/472 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
+D KL+DA MV P +V+ + LL + K NK I + E M + GI +
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y+ +N C++ + A+ ++ KM GY + VT NSL+ G C +++++ +D++
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++ G P+ T++ L+ ++ A+ L++ ++ KG +P+LV+Y ++ GLCK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+ A+ + E +VV YN ++ LC ++A +L +M+ P + TYN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH-RR 373
I L +G+ A ++L +M++ P +N +I EGK+ K D+M +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 374 CKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
C P+ YN L C +V+E + + + + Y +I + A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
+ +M G PD TY+ L+ GLC G +E AL +F M++ D K D+ + ++ L
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
CK+ + + ++F + KG PN TYT ++ G + E + + E++
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 205/438 (46%), Gaps = 2/438 (0%)
Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
K+ AI + MV S P ++ L++ + K + L E+M++ G N TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
+ C L+ +L L ++++ G P+ T + LL + A+ L+D ++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
G +P+ V++ L+ GL + + EA+ + KG +P++V+Y ++ LC G + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
LL +M+ G +V YN +I L + D A + ++M +P +YNP+I+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSP 411
LC+ G+ + L M + P+ +N L GK+ EA + + ++ P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 412 QEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
Y +I C+ + + ++ EM++ G ++ TY++LI G + A +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
M PD+ +N LL GLC + + +L VF+ M ++ + TYT ++E +
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 531 DELELSAEVLKELQLRQV 548
++E ++ L L+ V
Sbjct: 475 GKVEDGWDLFCSLSLKGV 492
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 143/278 (51%), Gaps = 4/278 (1%)
Query: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
++DAF +M +KG KPDV L+ LC + A +++ M+ I PD +
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 139 LVNCLCKKGNVGYAMQLVEKM--EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
L++ K+G + A +L ++M + +P + V YN+L++G C + + ++ + Q
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
+GLV N TY+ L+ ++ R A + +++ G P++++YN+LL GLC G E
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
A+ F + + + ++V+Y ++ +LC G+ E+ +L + P +VTY ++
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPII-ARL 353
G + A + EM + P++ +YN +I ARL
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 137/284 (48%), Gaps = 2/284 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSG-IIPDASSY 136
+ +DA L M+ K PD+V L+ K K+ +A K+ + MV S PD +Y
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
L+ CK V M++ +M G NTVTY +L+ G + + + +++
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
G+ P+ TY+ LL+ V A+ + + + + K ++V+Y ++ LCK G+ E+
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 257 AIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG 316
F L KG +PNVV+Y ++ C +G EEA+ L EM P TYN LI
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Query: 317 SLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
+ G + +++ EM F A+++ ++ + +G++D
Sbjct: 540 ARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLD 582
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 34/232 (14%)
Query: 323 KTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN 382
K D A+ + +MVK R PS ++ +++ + K DLV+ +QM
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM------------- 101
Query: 383 GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYG 442
Q+LG N Y I CR+ + A +L +M K G
Sbjct: 102 ------------------QNLGISHNLYT---YSIFINYFCRRSQLSLALAILGKMMKLG 140
Query: 443 FTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSL 502
+ P T +SL+ G C I EA+ + M E Y+PD F L+ GL + + ++
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 503 EVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
+ + M+ KG P+ TY ++ G+ + E +L+ +L +++ ++ ++ +
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 228/475 (48%), Gaps = 1/475 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R K+ +A ERM +P V ++ L + +A KV M GI PD
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
S+T + CK A++L+ M G N V Y ++V G + + ++
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+ G+ T++ LL K+ V KLLD +I +G PNL +YN+ + GLC+ G
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+ A+R L +G +P+V++YN L+ LC +++EA L +M P TYN L
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I G A +++ + V F P +Y +I LC EG+ + + ++ +
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 375 KPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
KPN YN L L G + EA + + K + + ++ LC+ G A
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
L+ M G+ PD +T++ LI G + +E ALEI VM + PDV +N+LL GLC
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
K+ + + +E ++ M+EKG PN T+ IL+E + +L+ + +L+E++ + V
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 232/459 (50%), Gaps = 4/459 (0%)
Query: 88 RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
+M++ G + LL LCK +K+ K+++ ++ G++P+ +Y + LC++G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
+ A+++V + + G + +TYN+L+ GLC ++ +L +++ +GL P+++TY+
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
L+ K V A +++ D + G P+ +Y L+ GLC EG T A+ F + K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
G +PNV+ YN L++ L +G EA +L EM P + T+NIL+ L G A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
++ M+ + P ++N +I ++ K++ ++ LD M P+ TYN L
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
LC K ++ +++ K +P F + ++ SLCR K +A LL EM P
Sbjct: 506 LCKTSKFEDVMETYKTMVEK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEE-YDYKPDVDNFNALLLGLCKSRRTDLSLEV 504
D+ T+ +LI G C G ++ A +F MEE Y +N ++ + ++ ++
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 505 FQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
FQ M+++ P+ TY ++V+G + L + L E+
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 234/467 (50%), Gaps = 1/467 (0%)
Query: 88 RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
RM +G PDV T + CK ++ A++++ M S G + +Y +V ++
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
+L KM G T+N L+R LC G++ + + LD++I++G++PN FTY+
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255
Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
++ + + A++++ +I +G KP++++YN L+ GLCK + +EA + + ++
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315
Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
G EP+ +YN L+ C G + A ++ + P TY LI L + G+T+ A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM- 386
L + +E + +P+ YN +I L ++G + + ++M + P T+N L
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
LC +G V +A +++ + +K + +I + K A ++L M G PD
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
YTY+SL+ GLC E+ +E + M E P++ FN LL LC+ R+ D +L + +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
M K P+ T+ L++G +L+ + + ++++ VS S
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 232/470 (49%), Gaps = 2/470 (0%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
L++++ +G P++ + LC+ ++ A++++ ++ G PD +Y L+ LCK
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298
Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
A + KM + G ++ TYN+L+ G C G + + + + + G VP+ FT
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
Y L++ E + A+ L ++ + KG KPN++ YN L+ GL +G EA + ++
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
KG P V ++NIL+ LC G +A+ L+ M P I T+NILI + K +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-L 384
+AL++LD M+ P +YN ++ LC K + V++ M + C PN T+N L
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 385 AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK-YGF 443
LC K+ EA +++ + NK + + +I C+ G A+ L +M + Y
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
+ + TY+ +I + + A ++F M + PD + ++ G CK+ +L +
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Query: 504 VFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESA 553
M+E G +P+ TT ++ + +D + +A ++ + + +V E+
Sbjct: 659 FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 236/491 (48%), Gaps = 11/491 (2%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+L+ A + ++ +G KPDV+ NL+Y LCK +K ++A + MV+ G+ PD+ +Y
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+ CK G V A ++V G+ + TY SL+ GLC G N++L + + K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G+ PN Y+ L++ + + A +L +++ KG P + ++N+L+ GLCK G +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ + SKG+ P++ ++NIL+ + + E A E+L M P + TYN L+
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
L K + ++ MV+ P+ ++N ++ LC K+D + L++M ++ P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 378 EGTYNGLA-MLCGVGKVQEAFAIIQSLGNK-QNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
T+ L C G + A+ + + + + SS Y +I + K A +L
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKS 495
EM PD YTY ++ G C G + + + M E + P + ++ LC
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 496 RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
R + + M++KG +P V I D+ E++A +L L ++ +S +
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAA---PKLVLEDLLKKSCIT 736
Query: 556 RLVMQYDFEGI 566
+ F+G+
Sbjct: 737 YYAYELLFDGL 747
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 44/249 (17%)
Query: 327 ALKVLDEMVKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN---EGTYN 382
AL++ + M K F+ + ++Y +I +L GK + + + L M R N EG Y
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM--RENVGNHMLEGVYV 80
Query: 383 GLAMLCG-VGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTK 440
G G GKVQEA + + + + + P F Y +++ L G QA ++ M
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 441 YGFTPDSYTYSSLIRGLCM-----------------------------------EGLIEE 465
G TPD Y+++ ++ C E E
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199
Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
E+F M + FN LL LCK ++ +I++G +PN TY + ++
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 526 GIAHQDELE 534
G+ + EL+
Sbjct: 260 GLCQRGELD 268
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 204/394 (51%), Gaps = 4/394 (1%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
L +M+ G +PD+V T+L+ C N+M++A+ ++ MV GI PD YT +++ LCK
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
G+V YA+ L ++ME+YG + V Y SLV GLC G + L + ++ + P+ T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
++ L++A KE A +L +++I PN+ +Y L+ G C EG +EA + F +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
+KG P+VV+Y L+ C + ++A ++ EM + +TY LI GK +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR---CKPNEGTYN 382
A +V MV P+ +YN ++ LC GKV + + M R PN TYN
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 383 GLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
L LC GK+++A + + + ++ Y +I +C+ GK A L +
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 442 GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
G P+ TY+++I GL EGL EA +F M+E
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 228/471 (48%), Gaps = 13/471 (2%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+ N+A MV P ++ T LL + K K I + + + G+ D +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+NC C+ A + KM G+ + VT+ SL+ G C+ + +++ ++++++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G+ P+ Y+ ++++ K V+ A+ L D + G +P++V Y L+ GLC GR +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
R + + +P+V+++N L+ + EG++ +A EL EM +P I TY LI
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 318 LAYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
G D A ++ M KG F P +Y +I C KVD +K +M +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 377 NEGTYNGLAMLCG-VGK---VQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
N TY L G VGK QE F+ + S G N Y ++ LC GK +A
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT---YNVLLHCLCYNGKVKKAL 407
Query: 433 QLLYEMTKY---GFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
+ +M K G P+ +TY+ L+ GLC G +E+AL +F M + + + + ++
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
G+CK+ + ++ +F + KG PN TYT ++ G+ ++ L+ A VL
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL-FREGLKHEAHVL 517
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 181/403 (44%), Gaps = 34/403 (8%)
Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
KGN G A+ ++ + Y ++R N++L +++ +P+
Sbjct: 15 KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
++ LL K + + L D + G +L + N+L+ C+ + A F +
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
GFEP++V++ L+ C+ R EEA ++ +M P +V Y +I SL +G +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
+AL + D+M RP Y ++ LC+ G+ L M R+ KP+ T+N L
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL- 253
Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTP 445
I + ++GK A +L EM + P
Sbjct: 254 ---------------------------------IDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 446 DSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVF 505
+ +TY+SLI G CMEG ++EA ++F +ME PDV + +L+ G CK ++ D ++++F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 506 QMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
M +KG N TYT L++G + ++ EV + R V
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 206/440 (46%), Gaps = 4/440 (0%)
Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
+ +A+ + MV S +P +T L+N + K + L + ++ G + T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
L+ C + FL ++++ G P+ T++ L+ + AM +++ ++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
G KP++V Y ++ LCK G A+ F + + G P+VV Y L+ LC GRW +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
+ LL M P ++T+N LI + GK A ++ +EM++ P+ +Y +I
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
C EG VD + M + C P+ Y L C KV +A I + K +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
Y +I + GK A ++ M G P+ TY+ L+ LC G +++AL IF
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 472 VMEEYDYK---PDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
M++ + P++ +N LL GLC + + + +L VF+ M ++ TYTI+++G+
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 529 HQDELELSAEVLKELQLRQV 548
+++ + + L + V
Sbjct: 472 KAGKVKNAVNLFCSLPSKGV 491
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 7/316 (2%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D+ ++ +N A ++M + G +PDVV T+L+ LC + + + A ++ M I
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
PD ++ L++ K+G A +L +M N TY SL+ G CM G ++++ Q
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
+ KG P+ Y+ L+ K + V AMK+ ++ KG N ++Y L+ G +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA-----EMDGGDRS 305
G+ A F + S+G PN+ +YN+LL LC G+ ++A + EMDG +
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG--VA 422
Query: 306 PTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKC 365
P I TYN+L+ L Y+GK + AL V ++M K +Y II +C GKV V
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 366 LDQMFHRRCKPNEGTY 381
+ + KPN TY
Sbjct: 483 FCSLPSKGVKPNVVTY 498
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 218/478 (45%), Gaps = 34/478 (7%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+ DAF MV P +V T LL + + I + M GI D S+T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L++C C+ + +A+ ++ KM GY + VT+ SL+ G C++ + + + +++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G PN Y+ L++ K ++ A++LL+++ KG ++V+YN LLTGLC GR +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
R RD+ + P+VV++ L+ +G +EA EL EM P VTYN +I
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
L HG+ A K D M P+ +YN +I+ C VD +K +M +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
TYN L I C+ GK A +
Sbjct: 351 IFTYNTL----------------------------------IHGYCQVGKLRVALDIFCW 376
Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
M TPD T+ L+ GLC+ G IE AL F M E + + +N ++ GLCK+ +
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVE 555
+ + E+F + +G P+ TYTI++ G+ + E+++ ++ ++ + E
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAE 494
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 193/401 (48%), Gaps = 34/401 (8%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R +L+ A L +M+ G++P +V +LL+ C N++ A ++ +MV SG P+
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
Y L++ LCK G + A++L+ +ME G + VTYN+L+ GLC G + + + L +
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+++ + P+ T++ L++ K+ + A +L ++I PN V+YN ++ GLC GR
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+A + F + SKG PNVV+YN L+ C +E +L M + I TYN L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I GK AL + MV R P ++ ++ LC G+++ + D M
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM----- 412
Query: 375 KPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
+ +E Y G+ Y +I LC+ K +A++L
Sbjct: 413 RESE-KYIGIVA----------------------------YNIMIHGLCKADKVEKAWEL 443
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
+ G PD+ TY+ +I GLC G EA E+ M+E
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 36/344 (10%)
Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
L TG R E+A F ++ P++V + LL + R+E +M+
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDE------------------------------ 333
S + ++ ILI + AL VL +
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 334 -----MVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
MVK + P+ YN +I LC G++++ ++ L++M + + TYN L L
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDS 447
C G+ +A +++ + + + + +I ++G +A +L EM + P++
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 448 YTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQM 507
TY+S+I GLCM G + +A + F +M P+V +N L+ G CK R D +++FQ
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 508 MIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSE 551
M +G + TY L+ G +L ++ ++ + R+V +
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 208 bits (529), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 234/473 (49%), Gaps = 6/473 (1%)
Query: 76 DHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASS 135
D +L+DA M P +++ + LL + K NK I E M GI + +
Sbjct: 56 DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115
Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
Y L+NC C+ + A+ L+ KM GY + VT NSL+ G C ++ ++ +D+++
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
+ G P+ T++ L+ + A+ L+D ++ +G +P+LV+Y ++ GLCK G T+
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
A+ + + E NVV Y+ ++ SLC ++A L EM+ P ++TY+ LI
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
L +G+ A ++L +M++ + P+ +++ +I +GK+ K ++M R
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 376 PNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
PN TY+ L C + ++ EA +++ + K Y +I C+ + + +L
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
EM++ G ++ TY++LI G + A +F M P++ +N LL GLCK
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS-----AEVLKE 542
+ + ++ VF+ + P+ TY I++EG+ + ++ A LKE
Sbjct: 476 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALKE 528
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 201/431 (46%), Gaps = 34/431 (7%)
Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
++ AI + +M S P ++ L++ + K + EKME G N TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
L+ C L+ +L L ++++ G P+ T + LL + A+ L+D ++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
G KP+ V++ L+ GL + EA+ + +G +P++V+Y ++ LC G + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
LL +M+ +V Y+ +I SL + D AL + EM RP+ +Y+ +I+
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQ 412
LC+ G+ + L M R+ PN T++ L
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSAL---------------------------- 329
Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
I + +KGK +A +L EM K P+ +TYSSLI G CM + EA ++ +
Sbjct: 330 ------IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
M D P+V +N L+ G CK++R D +E+F+ M ++G + N TYT L+ G +
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 533 LELSAEVLKEL 543
+ + V K++
Sbjct: 444 CDNAQMVFKQM 454
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 173/383 (45%), Gaps = 1/383 (0%)
Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
L+ ++ + Q P+ +S LL A K + + + G NL +YN+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
L+ C+ R A+ + G+EP++V+ N LL C R +A L+ +M
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
P VT+ LI L H K A+ ++D MV+ +P +Y ++ LC G DL +
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 364 KCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
L++M + + N Y+ + LC +A + + NK Y +I+ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
C G+ A +LL +M + P+ T+S+LI +G + +A +++ M + P++
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
+++L+ G C R + ++ ++MI K +PN TY L+ G ++ E+ +E
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 543 LQLRQVVSESAVERLVMQYDFEG 565
+ R +V + ++ F+
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQA 441
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 230/485 (47%), Gaps = 22/485 (4%)
Query: 77 HKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA---------------IKVM 121
HKL+ + ++ G +PDVV LL+ LC +++ +A + +
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
+ MV G+ P ++ L+N LC +G V A LV KM G + VTY ++V G+C +
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
G+ +L L ++ + + P+ YS +++ K+ A L +++ KG PN+ +Y
Sbjct: 275 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
N ++ G C GR +A R RD+ + P+V+++N L+ + EG+ EA +L EM
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
P VTYN +I H + D A + D M P ++N II C +VD
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDE 450
Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVIT 420
++ L ++ R N TYN L C V + A + Q + + ++
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
C K +A +L + D+ Y+ +I G+C ++EA ++F + + +P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 481 DVDNFNALLLGLC-KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEV 539
DV +N ++ G C KS +D ++ +F M + G P+ +TY L+ G E++ S E+
Sbjct: 571 DVQTYNVMISGFCGKSAISDANV-LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 540 LKELQ 544
+ E++
Sbjct: 630 ISEMR 634
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 227/490 (46%), Gaps = 18/490 (3%)
Query: 74 HRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
H L+DA + MV V ++ + N+ AI + M I +
Sbjct: 82 HYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNI 141
Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSL----- 188
S+ L+ C C + +++ K+ G+ + VT+N+L+ GLC+ ++++L
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 189 ----------QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL 238
D++++ GL P T++ L+ E V A L++ ++ KG ++
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAE 298
V+Y ++ G+CK G T+ A+ + +P+VV Y+ ++ LC +G +A L +E
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 299 MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK 358
M +P + TYN +I G+ A ++L +M++ P ++N +I+ EGK
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 359 VDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
+ K D+M HR P+ TYN +M+ G K F + + + S + +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYN--SMIYGFCK-HNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
I CR + + QLL E+++ G ++ TY++LI G C + A ++F M +
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
PD N LL G C++ + + +LE+F+++ + Y I++ G+ +++ + +
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 539 VLKELQLRQV 548
+ L + V
Sbjct: 559 LFCSLPIHGV 568
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 188/397 (47%), Gaps = 5/397 (1%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
+ +MV KG DVV ++ +CK K A+ ++ M + I PD Y+ +++ LCK
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
G+ A L +M + G N TYN ++ G C G + + + L +I++ + P+ T
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
++ L+ A+ KE + A KL D+++ + P+ V+YN ++ G CK R ++A F +
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
S P+VV++N ++ C R +E +LL E+ TYN LI +
Sbjct: 429 S----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
A + EM+ P + N ++ C K++ ++ + + + + YN +
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
+C KV EA+ + SL + Y +I+ C K A L ++M G
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPD 481
PD+ TY++LIRG G I++++E+ M + D
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 204/494 (41%), Gaps = 82/494 (16%)
Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
+ AI + MV S A ++ + A+ L KME P N ++N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
L++ C L+ SL +L + G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGF---------------------------------- 172
Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGF---------------EPNVVSYNI 278
+P++V++N LL GLC E R EA+ F + GF P V+++N
Sbjct: 173 -QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 279 LLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
L+ LC+EGR EA L+ +M G +VTY ++ + G T AL +L +M +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAF 397
+P Y+ II RLC +G +M + PN TYN + C G+ +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
+++ + ++ + + +I++ ++GK ++A +L EM PD+ TY+S+I G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 458 CMEGLIEEALEIFVVMEEYD---YKPDVD----------------------------NFN 486
C ++A +F +M D + +D +N
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
L+ G C+ + + ++FQ MI G P+ T IL+ G ++LE + E+ + +Q+
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 547 QVVSESAVERLVMQ 560
++ ++ +++
Sbjct: 532 KIDLDTVAYNIIIH 545
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 144/286 (50%), Gaps = 5/286 (1%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
++ KL +A + M+ + PD V +++Y CK N+ A + ++M S PD
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 433
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
++ +++ C+ V MQL+ ++ G NT TYN+L+ G C + NLN + +
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
I G+ P+ T + LL + + A++L + I + V+YN+++ G+CK +
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+EA F LP G EP+V +YN+++ C + +AN L +M P TYN L
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
I G+ D +++++ EM F A + ++A L ++G++D
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLD 658
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 156/360 (43%), Gaps = 6/360 (1%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
+D +DA M+ KG P+V ++ C + A +++ M+ I PD
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
++ L++ K+G + A +L ++M +TVTYNS++ G C + + D +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
P+ T++ +++ + + V M+LL +I +G N +YN L+ G C+
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
A F+++ S G P+ ++ NILL C + EEA EL + V YNI+
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I + K D A + + P +YN +I+ C + + +M
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 375 KPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
+P+ TYN L C G++ ++ +I + S F ++ L G+ ++F
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVADLITDGRLDKSFS 662
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 156/381 (40%), Gaps = 32/381 (8%)
Query: 193 RLIQKGL--VPNAFTYSFLLEAAYKERGVHAAMKLLDDII-----AKGGKP--NLVSYNV 243
R+ +KG +P+ +F E + G H K LDD I +P V N
Sbjct: 53 RVAEKGTKSLPSLTQVTFEGEELKLKSGSHY-FKSLDDAIDFFDYMVRSRPFYTAVDCNK 111
Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
++ + R + AI +R + + N+ S+NIL++ C + + ++
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
P +VT+N L+ L + AL + MV+ F + A +
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF----------------- 214
Query: 364 KCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
DQM P T+N L LC G+V EA A++ + K Y ++ +
Sbjct: 215 ---DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
C+ G T A LL +M + PD YS++I LC +G +A +F M E P+V
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
+N ++ G C R + + + MIE+ P+ T+ L+ + +L AE L +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL-FEAEKLCD 390
Query: 543 LQLRQVVSESAVERLVMQYDF 563
L + + V M Y F
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGF 411
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 218/453 (48%), Gaps = 39/453 (8%)
Query: 82 AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
F +R G+K + L+ L K N+ V + M+ I P+ ++ ++N
Sbjct: 172 GFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVIN 231
Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGN---LNQSLQFLDRLIQKG 198
LCK G + A ++E M+ YG N V+YN+L+ G C LG + ++ L +++
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND 291
Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
+ PN T++ L++ +K+ + +MK+ +++ + KPN++SYN L+ GLC G+ EAI
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
+ S G +PN+++YN L+ C +EA ++ + G PT YN+LI +
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
GK D + +EM + P +YN +IA LC G ++ K DQ+
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL--------- 462
Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
T GL L + E + CRKG++ +A LL EM
Sbjct: 463 -TSKGLPDLVTFHILMEGY-------------------------CRKGESRKAAMLLKEM 496
Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME-EYDYKPDVDNFNALLLGLCKSRR 497
+K G P TY+ +++G C EG ++ A + ME E + +V ++N LL G + +
Sbjct: 497 SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
+ + + M+EKG +PN TY I+ E + Q
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQ 589
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 188/401 (46%), Gaps = 14/401 (3%)
Query: 167 NTVTYNSLVRGLCMLGNLNQS-----LQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHA 221
+ V NS++ + +L N S + R G +A + L+ A KE
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 222 AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLR 281
+ ++I + +PN+ ++NV++ LCK G+ +A D+ G PNVVSYN L+
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 282 SLCM---EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR 338
C G+ +A+ +L EM D SP + T+NILI ++KV EM+
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 339 FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAF 397
+P+ SYN +I LC+ GK+ + D+M +PN TYN L C ++EA
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
+ S+ + Y +I + C+ GK F L EM + G PD TY+ LI GL
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 458 CMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNE 517
C G IE A ++F + PD+ F+ L+ G C+ + + + + M + G P
Sbjct: 447 CRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH 505
Query: 518 TTYTILVEGIAHQDELE----LSAEVLKELQLRQVVSESAV 554
TY I+++G + L+ + ++ KE +LR V+ V
Sbjct: 506 LTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 179/384 (46%), Gaps = 6/384 (1%)
Query: 87 ERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKK 146
+ M+ + +P+V ++ LCK KM KA VME M G P+ SY L++ CK
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 147 GNVG---YAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNA 203
G G A ++++M + N T+N L+ G NL S++ ++ + + PN
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 204 FTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRD 263
+Y+ L+ + A+ + D +++ G +PNL++YN L+ G CK +EA+ F
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 264 LPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGK 323
+ +G P YN+L+ + C G+ ++ L EM+ P + TYN LI L +G
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 324 TDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYN- 382
+ A K+ D++ + P +++ ++ C +G+ L +M KP TYN
Sbjct: 452 IEAAKKLFDQLT-SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 383 GLAMLCGVGKVQEAFAI-IQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKY 441
+ C G ++ A + Q ++ Y ++ +KGK A LL EM +
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 442 GFTPDSYTYSSLIRGLCMEGLIEE 465
G P+ TY + + +G + +
Sbjct: 571 GLVPNRITYEIVKEEMVDQGFVPD 594
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 153/290 (52%), Gaps = 2/290 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D +D L + + M+ + KP+V+ +L+ LC K+ +AI + + MVS+G+
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ +Y L+N CK + A+ + ++ G T YN L+ C LG ++
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
+ + ++G+VP+ TY+ L+ + + AA KL D + +K G P+LV++++L+ G C+
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK-GLPDLVTFHILMEGYCR 482
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIV 309
+G + +A +++ G +P ++YNI+++ C EG + A + +M+ R +
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKV 359
+YN+L+ + GK + A +L+EM++ P+ +Y + + +G V
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K+ A L+ MV P++ L+ K + + ++KV + M+ + P+ SY
Sbjct: 276 KMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYN 335
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+N LC G + A+ + +KM G N +TYN+L+ G C L ++L + +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G VP Y+ L++A K + L +++ +G P++ +YN L+ GLC+ G E A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ F L SKG P++V+++IL+ C +G +A LL EM P +TYNI++
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 318 LAYHGKTDHALKVLDEMVK-GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
G A + +M K R R + ASYN ++ +GK++ L++M + P
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Query: 377 NEGTY 381
N TY
Sbjct: 575 NRITY 579
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 230/469 (49%), Gaps = 4/469 (0%)
Query: 78 KLNDAFLQLERMVSKGH-KPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY 136
KL DA LERMVS+ PD V +L + K ++ +++ M +G++P+ +Y
Sbjct: 219 KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY 278
Query: 137 TYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQ 196
LV CK G++ A Q+VE M+ + TYN L+ GLC G++ + L+ +D +
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 197 KGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEE 256
L P+ TY+ L++ ++ A KL++ + G K N V++N+ L LCKE + E
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 257 AIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
R ++L GF P++V+Y+ L+++ G A E++ EM +T N ++
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
+L K D A +L+ K F +Y +I E KV+ ++ D+M +
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518
Query: 376 PNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
P T+N L LC GK + A L + +I C++G+ +AF+
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
E K+ F PD+YT + L+ GLC EG+ E+AL F + E + + D +N ++ CK
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMISAFCK 637
Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
++ + ++ M EKG P+ TY + + +L + E+LK+
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 232/450 (51%), Gaps = 5/450 (1%)
Query: 99 VQATNLLYD-LCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
VQ N+L + C K++ A+ ++E MVS + PD +Y ++ + KKG + +L+
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
M+ G N VTYN+LV G C LG+L ++ Q ++ + Q ++P+ TY+ L+
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
+ ++L+D + + +P++V+YN L+ G + G + EA + + + G + N V++
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 277 NILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
NI L+ LC E + E + E+ D SP IVTY+ LI + G AL+++ EM
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
+ + + + N I+ LC E K+D L+ R +E TY L M KV+
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
+A + + + + + +I LC GKT A + E+ + G PD T++S+I
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
G C EG +E+A E + ++ +KPD N LL GLCK T+ +L F +IE+ ++
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV 623
Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
+ TY ++ +L+ + ++L E++
Sbjct: 624 -DTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 215/432 (49%), Gaps = 6/432 (1%)
Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCK---KGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
A+++ + M+ + P+ + L+ L + ++ A ++ + M G N T+N
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLV-PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
LV G C+ G L +L L+R++ + V P+ TY+ +L+A K+ + +LL D+
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
G PN V+YN L+ G CK G +EA + + P++ +YNIL+ LC G E
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
EL+ M P +VTYN LI G + A K++++M + + ++N +
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389
Query: 353 LCSEGKVDLVVKCLDQMFHRR-CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSS 410
LC E K + V + + ++ P+ TY+ L VG + A +++ +G K
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 411 PQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIF 470
++ +LC++ K +A LL K GF D TY +LI G E +E+ALE++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 471 VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQ 530
M++ P V FN+L+ GLC +T+L++E F + E G +P+++T+ ++ G +
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 531 DELELSAEVLKE 542
+E + E E
Sbjct: 570 GRVEKAFEFYNE 581
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 184/369 (49%), Gaps = 6/369 (1%)
Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK---ERGVHAAMKLLDDIIAKGGKPNL 238
G + +LQ ++I+ L PN T + LL + + +A ++ DD++ G N+
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 239 VSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANELLA 297
++NVL+ G C EG+ E+A+ + S+ P+ V+YN +L+++ +GR + ELL
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
+M P VTYN L+ G A ++++ M + P +YN +I LC+ G
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
+ ++ +D M + +P+ TYN L C +G EA +++ + N + Q +
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 417 YVITSLCRKGKTYQAFQLLYEMTK-YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
+ LC++ K + + E+ +GF+PD TY +LI+ G + ALE+ M +
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
K + N +L LCK R+ D + + ++G + +E TY L+ G ++++E
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 536 SAEVLKELQ 544
+ E+ E++
Sbjct: 505 ALEMWDEMK 513
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 15/382 (3%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAI-KVMEMMVSSGIIPDASSYTYLVNCLC 144
+E+M + G K + V L LCK K + KV E++ G PD +Y L+
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 145 KKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAF 204
K G++ A++++ +M G NT+T N+++ LC L+++ L+ ++G + +
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 205 TYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 264
TY L+ ++E V A+++ D++ P + ++N L+ GLC G+TE A+ F +L
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 265 PSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKT 324
G P+ ++N ++ C EGR E+A E E P T NIL+ L G T
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 325 DHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG- 383
+ AL + +++ R +YN +I+ C + K+ L +M + +P+ TYN
Sbjct: 608 EKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
+++L GK+ E +++ K S+ R + +K
Sbjct: 667 ISLLMEDGKLSETDELLKKFSGK------------FGSMKRDLQVETEKNPATSESKEEL 714
Query: 444 TPDSYTYSSLIRGLCMEGLIEE 465
++ YS +I LC G ++E
Sbjct: 715 NTEAIAYSDVIDELCSRGRLKE 736
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 24/304 (7%)
Query: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
L+ A + M KG K + + +L LCK K+ +A ++ G I D +Y
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
L+ ++ V A+++ ++M+ T+NSL+ GLC G +++ D L + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
L+P+ T++ ++ KE V A + ++ I KP+ + N+LL GLCKEG TE+A+
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
FF L + E + V+YN ++ + C + + +EA +LL+EM+ P TYN I L
Sbjct: 612 NFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 319 AYHGK---TDHALKVL---------DEMVKGRFRPS-----------AASYNPIIARLCS 355
GK TD LK D V+ P+ A +Y+ +I LCS
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCS 730
Query: 356 EGKV 359
G++
Sbjct: 731 RGRL 734
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 32/187 (17%)
Query: 341 PSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAII 400
PS A ++ ++ EGK + ++ +M + KPN T N L L G+ + +F+I
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTL--LIGLVRYPSSFSI- 185
Query: 401 QSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCME 460
SS +E + +M K G + + T++ L+ G C+E
Sbjct: 186 --------SSAREVFD--------------------DMVKIGVSLNVQTFNVLVNGYCLE 217
Query: 461 GLIEEALEIFVVM-EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETT 519
G +E+AL + M E+ PD +N +L + K R E+ M + G +PN T
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 520 YTILVEG 526
Y LV G
Sbjct: 278 YNNLVYG 284
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 216/455 (47%), Gaps = 6/455 (1%)
Query: 63 NRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVME 122
+R G T+ L + +M+ P +V + +L + K+ I +
Sbjct: 34 SRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFH 93
Query: 123 MMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLG 182
M GI D SY ++NCLC+ A+ +V KM +GY + VT +SL+ G C
Sbjct: 94 HMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGN 153
Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
+ ++ + ++ + G P+ Y+ +++ + K V+ A++L D + G + + V+YN
Sbjct: 154 RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 213
Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
L+ GLC GR +A R RD+ + PNV+++ ++ EG++ EA +L EM
Sbjct: 214 SLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
P + TYN LI L HG+ D A ++LD MV P +YN +I C +VD
Sbjct: 274 CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 363 VKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVIT 420
K +M R + TYN + G+ A Q + ++ +S P Y ++
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA----QEIFSRMDSRPNIRTYSILLY 389
Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
LC + +A L M K D TY+ +I G+C G +E+A ++F + KP
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
DV ++ ++ G C+ R+ D S +++ M E G +P
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 209/432 (48%), Gaps = 4/432 (0%)
Query: 114 MKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNS 173
+++ I + M+ S +P ++ +++ + K N + L ME G + +YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 174 LVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKG 233
++ LC +L + ++++ G P+ T S L+ + V A+ L+ + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 234 GKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEAN 293
+P++V YN ++ G CK G +A+ F + G + V+YN L+ LC GRW +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 294 ELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARL 353
L+ +M D P ++T+ +I GK A+K+ +EM + P +YN +I L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQ 412
C G+VD + LD M + C P+ TYN L C +V E + + + +
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 413 EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVV 472
Y +I + G+ A ++ M P+ TYS L+ GLCM +E+AL +F
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 473 MEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDE 532
M++ + + D+ +N ++ G+CK + + ++F+ + KG P+ +YT ++ G + +
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 533 LELSAEVLKELQ 544
+ S + +++Q
Sbjct: 467 WDKSDLLYRKMQ 478
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 174/368 (47%), Gaps = 6/368 (1%)
Query: 183 NLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYN 242
NL + + ++IQ +P+ +S +L K + + L + G +L SYN
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 243 VLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGG 302
+++ LC+ R A+ + G+EP+VV+ + L+ C R +A +L+++M+
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 303 DRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLV 362
P +V YN +I G + A+++ D M + R A +YN ++A LC G+
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 363 VKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVIT 420
+ + M R PN T+ + + GK EA + + + ++ P F Y +I
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLIN 287
Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
LC G+ +A Q+L M G PD TY++LI G C ++E ++F M +
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
D +N ++ G ++ R D + E+F M + PN TY+IL+ G+ +E + +
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 541 KELQLRQV 548
+ +Q ++
Sbjct: 405 ENMQKSEI 412
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 144/330 (43%), Gaps = 34/330 (10%)
Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
P++V ++ +L+ + K + I F + G ++ SYNI++ LC R+ A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
+ +M P +VT + LI + A+ ++ +M + FRP YN II C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
G V+ V+ D+M + + TYN L
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSL------------------------------- 215
Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
+ LC G+ A +L+ +M P+ T++++I EG EA++++ M
Sbjct: 216 ---VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
PDV +N+L+ GLC R D + ++ +M+ KG +P+ TY L+ G ++
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 536 SAEVLKELQLRQVVSESAVERLVMQYDFEG 565
++ +E+ R +V ++ ++Q F+
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 209/444 (47%), Gaps = 1/444 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
+ NDA RMV P ++ T LL + K N+ I + E M GI P +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+++C+C A + KM G+ + VT+ SL+ G C + ++ D+++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G PN TY+ L+ K R ++ A++L + + G +PN+V+YN L+TGLC+ GR +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
RD+ + EPNV+++ L+ + G+ EA EL M P + TY LI
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
L +G D A ++ M + P+ Y +I C +V+ +K +M + N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
TY L C VG+ A + + +++ Y ++ LC GK +A +
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
M K + TY+ +I+G+C G +E+A ++F + KP+V + ++ G C+
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 497 RTDLSLEVFQMMIEKGQMPNETTY 520
+ +F+ M E G +PNE+ Y
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 204/433 (47%), Gaps = 1/433 (0%)
Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
+ A+ + MV S +P +T L++ + K + L E+M+ G P T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
++ +C+ ++ FL ++++ G P+ T++ LL + A+ L D I+
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
G KPN+V+Y L+ LCK A+ F + + G PNVV+YN L+ LC GRW +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
LL +M P ++T+ LI + GK A ++ + M++ P +Y +I
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
LC G +D + M C PNE Y L C +V++ I + K +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
Y +I C G+ A ++ +M+ PD TY+ L+ GLC G +E+AL IF
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
M + + ++ + ++ G+CK + + + ++F + KG PN TYT ++ G +
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 532 ELELSAEVLKELQ 544
+ + + K+++
Sbjct: 483 LIHEADSLFKKMK 495
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 170/365 (46%), Gaps = 36/365 (9%)
Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
N +L R++ +P+ ++ LL K + L + + G P L + N+
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
++ +C + A F + GFEP++V++ LL C R E+A L ++ G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
P +VTY LI L + +HA+++ ++M RP+ +YN ++ LC G+
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
L M RR +PN T+ L VGK+ EA +E Y +I
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA---------------KELYNVMI--- 285
Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
+M+ Y PD +TY SLI GLCM GL++EA ++F +ME P+
Sbjct: 286 --------------QMSVY---PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
+ L+ G CKS+R + +++F M +KG + N TYT+L++G +++ EV +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 543 LQLRQ 547
+ R+
Sbjct: 389 MSSRR 393
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 143/307 (46%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
++ LN A +M + G +P+VV L+ LC+ + A ++ M+ I P+
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
++T L++ K G + A +L M + TY SL+ GLCM G L+++ Q +
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+ G PN Y+ L+ K + V MK+ ++ KG N ++Y VL+ G C GR
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+ A F + S+ P++ +YN+LL LC G+ E+A + M + IVTY I+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
I + GK + A + + +P+ +Y +I+ C G + +M
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 375 KPNEGTY 381
PNE Y
Sbjct: 500 LPNESVY 506
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 225/462 (48%), Gaps = 4/462 (0%)
Query: 82 AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
AF L M+ +G +V LL LC+ + KA+ ++ M + ++PD SY ++
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
C+ + A++L +M+ G + VT+ L+ C G +++++ FL + GL
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
+ Y+ L+ + L D+++ +G P ++YN L+ G CK G+ +EA F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
+ +G PNV +Y L+ LC G+ +EA +LL M D P VTYNI+I L
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR--CKPNEG 379
G A+++++ M K R RP +YN ++ LC++G +D K L M P+
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 380 TYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
+YN L LC ++ +A I L K + + ++ S + G +A +L ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRT 498
+ +S TY+++I G C G++ A + M + +P V ++N LL LCK
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 499 DLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
D + +F+ M P+ ++ I+++G +++ SAE L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK-SAESL 586
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 218/453 (48%), Gaps = 3/453 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R+ + A L M PDV ++ C+ +++KA+++ M SG
Sbjct: 154 RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
++ L++ CK G + AM +++M+ G + V Y SL+RG C G L++ D +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+++G P A TY+ L+ K + A ++ + +I +G +PN+ +Y L+ GLC G+T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+EA++ + K EPN V+YNI++ LC +G +A E++ M P +TYNIL
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 315 IGSLAYHGKTDHALKVLDEMVKGR--FRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
+G L G D A K+L M+K P SYN +I LC E ++ + D + +
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
+ T N L G V +A + + + + + + Y +I C+ G A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
LL +M P + Y+ L+ LC EG +++A +F M+ + PDV +FN ++ G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 492 LCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
K+ + + M G P+ TY+ L+
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 227/452 (50%), Gaps = 5/452 (1%)
Query: 101 ATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKME 160
NL+ L ++ + A M+ + + S + L+ C + G+A ++ M
Sbjct: 75 GNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALML 134
Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
G+ N +N L++GLC +++ L + + L+P+ F+Y+ ++ + + +
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 221 AAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILL 280
A++L +++ G +LV++ +L+ CK G+ +EA+ F +++ G E ++V Y L+
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 281 RSLCMEGRWEEANELLAE-MDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
R C G + L E ++ GD SP +TYN LI G+ A ++ + M++
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGD-SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFA 398
RP+ +Y +I LC GK ++ L+ M + +PN TYN + LC G V +A
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 399 IIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK-YGFT-PDSYTYSSLIRG 456
I++ + ++ Y ++ LC KG +A +LLY M K +T PD +Y++LI G
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 457 LCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPN 516
LC E + +AL+I+ ++ E D N LL K+ + ++E+++ + + + N
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 517 ETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
TYT +++G L ++ +L ++++ ++
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 198/419 (47%), Gaps = 38/419 (9%)
Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
N+L+ L N + F ++++ N + S LLE + R A +L ++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEE 291
+G N+ ++N+LL GLC+ +A+ R++ P+V SYN ++R C E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 292 ANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV---------------- 335
A EL EM G S ++VT+ ILI + GK D A+ L EM
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 336 -----------KGRF--------RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKP 376
K F P A +YN +I C G++ + + M R +P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 377 NEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLL 435
N TY GL LCGVGK +EA ++ + K Y +I LC+ G A +++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 436 YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALE-IFVVMEEYDY-KPDVDNFNALLLGLC 493
M K PD+ TY+ L+ GLC +G ++EA + +++++++ Y PDV ++NAL+ GLC
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
K R +L+++ +++EK + T IL+ ++ + E+ K++ ++V S
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 208/437 (47%), Gaps = 52/437 (11%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K+++A L+ M G + D+V T+L+ C ++ + + + ++ G P A +Y
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+ CK G + A ++ E M + G N TY L+ GLC +G ++LQ L+ +I+K
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
PNA TY+ ++ K+ V A+++++ + + +P+ ++YN+LL GLC +G +EA
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 258 IRFFRDL--PSKGFEPNVVSYNILLRSLCMEGRWEEA----NELLAEMDGGDRSPTIVTY 311
+ + S +P+V+SYN L+ LC E R +A + L+ ++ GDR VT
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR----VTT 462
Query: 312 NILIGSLAYHGKTDHALKVLDE---------------MVKG------------------- 337
NIL+ S G + A+++ + M+ G
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 338 -RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKV 393
+PS YN +++ LC EG +D + ++M P+ ++N M+ G G +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN--IMIDGSLKAGDI 580
Query: 394 QEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSS 452
+ A +++ + ++ SP F Y +I + G +A +M GF PD++ S
Sbjct: 581 KSAESLLVGM-SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 453 LIRGLCMEGLIEEALEI 469
+++ +G ++ E+
Sbjct: 640 VLKYCISQGETDKLTEL 656
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 165/365 (45%), Gaps = 3/365 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K +A L M+ K +P+ V ++ LCK + A++++E+M PD +Y
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 138 YLVNCLCKKGNVGYAMQLVEKM-EDYGYPT-NTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
L+ LC KG++ A +L+ M +D Y + ++YN+L+ GLC L+Q+L D L+
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
+K + T + LL + K V+ AM+L I N +Y ++ G CK G
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
A + +P+V YN LL SLC EG ++A L EM + P +V++NI+I
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
G A +L M + P +Y+ +I R G +D + D+M +
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Query: 376 PNEGTYNGLAMLC-GVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
P+ + + C G+ + +++ L +K +E V+ +C +
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKR 691
Query: 435 LYEMT 439
L +T
Sbjct: 692 LLRVT 696
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
++ L+ A+ E M + PDVV ++ KA +K A ++ M +G+ PD
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y+ L+N K G + A+ +KM D G+ + +S+++ G ++ + + +L
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Query: 195 IQKGLV 200
+ K +V
Sbjct: 661 VDKDIV 666
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/477 (29%), Positives = 225/477 (47%), Gaps = 4/477 (0%)
Query: 75 RDHKLNDAFLQLERMVSK-GHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDA 133
R ++ D L + M++K P+V + LL+ L K A+++ MVS GI PD
Sbjct: 168 RSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV 227
Query: 134 SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
YT ++ LC+ ++ A +++ ME G N V YN L+ GLC + +++
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287
Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
L K L P+ TY L+ K + ++++D+++ P+ + + L+ GL K G+
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNI 313
EEA+ + + G PN+ YN L+ SLC ++ EA L M P VTY+I
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 314 LIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRR 373
LI GK D AL L EMV + S YN +I C G + + +M +++
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 374 CKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
+P TY L C GK+ +A + + K + + +++ L R G A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
+L EM ++ P+ TY+ +I G C EG + +A E M E PD ++ L+ GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 493 CKSRRTDLSLEVFQMMIEKGQMP-NETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
C + + +VF + KG NE YT L+ G + +LE + V +E+ R V
Sbjct: 588 CLTGQAS-EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 219/449 (48%), Gaps = 17/449 (3%)
Query: 89 MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
+ K KPDVV L+Y LCK + + +++M+ M+ P ++ + LV L K+G
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
+ A+ LV+++ D+G N YN+L+ LC +++ DR+ + GL PN TYS
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
L++ + + A+ L +++ G K ++ YN L+ G CK G A F ++ +K
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
EP VV+Y L+ C +G+ +A L EM G +P+I T+ L+ L G A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 329 KVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-L 387
K+ +EM + +P+ +YN +I C EG + + L +M + P+ +Y L L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 388 CGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
C G+ EA + L +K N E Y ++ CR+GK +A + EM + G D
Sbjct: 588 CLTGQASEAKVFVDGL-HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 447 SYTYSSLIRGLCME-------GLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
Y LI G GL++E M + KPD + +++ K+
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKE-------MHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIA 528
+ ++ +MI +G +PNE TYT ++ G+
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 228/528 (43%), Gaps = 36/528 (6%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D+ + K ++A L +RM G +P+ V + L+ C+ K+ A+ + MV +G+
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
Y L+N CK G++ A + +M + VTY SL+ G C G +N++L+
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
+ KG+ P+ +T++ LL ++ + A+KL +++ KPN V+YNV++ G C+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
EG +A F +++ KG P+ SY L+ LC+ G+ EA + + G+ +
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
Y L+ GK + AL V EMV+ Y +I L L +M
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 371 HRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
R KP++ Y + G +EAF I + N+ + Y VI LC+ G
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 430 QAFQLLYEMTKYGFTPD-----------------------------------SYTYSSLI 454
+A L +M P+ + TY+ LI
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
RG C +G IEEA E+ M PD + ++ LC+ ++E++ M EKG
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYD 562
P+ Y L+ G E+ + E+ E+ + ++ + R D
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSND 902
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 226/499 (45%), Gaps = 41/499 (8%)
Query: 48 TQVTISPKDSVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYD 107
V I P +YT R D L+ A + M + G ++V L+
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKD-------LSRAKEMIAHMEATGCDVNIVPYNVLIDG 271
Query: 108 LCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTN 167
LCK K+ +A+ + + + + PD +Y LV LCK ++++++M + +
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 168 TVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLD 227
+SLV GL G + ++L + R++ G+ PN F Y+ L+++ K R H A L D
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391
Query: 228 DIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEG 287
+ G +PN V+Y++L+ C+ G+ + A+ F ++ G + +V YN L+ C G
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 288 RWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYN 347
A +AEM PT+VTY L+G GK + AL++ EM PS ++
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 348 PIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQ 407
+++ L G + VK ++M KPN TYN
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN------------------------- 546
Query: 408 NSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
+I C +G +AF+ L EMT+ G PD+Y+Y LI GLC+ G EA
Sbjct: 547 ---------VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
+ + + + + + LL G C+ + + +L V Q M+++G + Y +L++G
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 528 AHQDELELSAEVLKELQLR 546
+ +L +LKE+ R
Sbjct: 658 LKHKDRKLFFGLLKEMHDR 676
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 189/387 (48%), Gaps = 7/387 (1%)
Query: 170 TYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDI 229
T ++L+ GL + +++ + ++ G+ P+ + Y+ ++ + + + + A +++ +
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 230 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRW 289
A G N+V YNVL+ GLCK+ + EA+ +DL K +P+VV+Y L+ LC +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 290 EEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
E E++ EM SP+ + L+ L GK + AL ++ +V P+ YN +
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL---GN 405
I LC K D+M +PN+ TY+ L M C GK+ A + + + G
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 406 KQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
K + P Y +I C+ G A + EM P TY+SL+ G C +G I +
Sbjct: 434 KLSVYP---YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 466 ALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
AL ++ M P + F LL GL ++ ++++F M E PN TY +++E
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 526 GIAHQDELELSAEVLKELQLRQVVSES 552
G + ++ + E LKE+ + +V ++
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDT 577
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 220/470 (46%), Gaps = 36/470 (7%)
Query: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
+ +AF + M KG P V ++ LCK K ++A +V M+ SG+ PD+++Y
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
L+ CKKG+V ++ M + V ++S++ GNL+++L + + + + G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
L+P+ Y+ L++ ++ + AM L ++++ +G ++V+YN +L GLCK EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
+ F ++ + P+ + IL+ C G + A EL +M +VTYN L+
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
G D A ++ +MV P+ SY+ ++ LCS+G + + D+M + KP
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT- 584
Query: 379 GTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM 438
M+C NS +I CR G L +M
Sbjct: 585 ------VMIC-------------------NS--------MIKGYCRSGNASDGESFLEKM 611
Query: 439 TKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYD--YKPDVDNFNALLLGLCKSR 496
GF PD +Y++LI G E + +A + MEE PDV +N++L G C+
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
+ + V + MIE+G P+ +TYT ++ G QD L + + E+ R
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 218/487 (44%), Gaps = 53/487 (10%)
Query: 75 RDHKLNDAFLQLERMVSKG--HKPDVVQATNLLYDLCKAN---------------KMKKA 117
R +L+DA L RM+ + + ++V + + + C +N K+++A
Sbjct: 125 RSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREA 184
Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
+ ++ S G + L+ L + G V A + +++ G N T N +V
Sbjct: 185 HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA 244
Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGV-HAAMKLLDDIIAKGGKP 236
LC G + + FL ++ +KG+ P+ TY+ L+ +AY +G+ A +L++ + KG P
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI-SAYSSKGLMEEAFELMNAMPGKGFSP 303
Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
+ +YN ++ GLCK G+ E A F ++ G P+ +Y LL C +G E ++
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 297 AEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSE 356
++M D P +V ++ ++ G D AL + + + P Y +I C +
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
G + + + ++M + C + TYN
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNT--------------------------------- 450
Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
++ LC++ +A +L EMT+ PDSYT + LI G C G ++ A+E+F M+E
Sbjct: 451 -ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELS 536
+ DV +N LL G K D + E++ M+ K +P +Y+ILV + + L +
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 537 AEVLKEL 543
V E+
Sbjct: 570 FRVWDEM 576
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 1/385 (0%)
Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
+N ++ L+R L ++ + L KG + + L+ + + V A +
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
+I G N+ + N+++ LCK+G+ E+ F + KG P++V+YN L+ +
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
+G EEA EL+ M G SP + TYN +I L HGK + A +V EM++ P + +
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLG 404
Y ++ C +G V K M R P+ ++ + ++ G + +A S+
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
Y +I CRKG A L EM + G D TY++++ GLC ++
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
EA ++F M E PD L+ G CK ++E+FQ M EK + TY L+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 525 EGIAHQDELELSAEVLKELQLRQVV 549
+G +++ + E+ ++ ++++
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEIL 547
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 158/374 (42%), Gaps = 36/374 (9%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R L+ A + + G PD V T L+ C+ + A+ + M+ G D
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y +++ LCK+ +G A +L +M + ++ T L+ G C LGNL +++ ++
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+K + + TY+ LL+ K + A ++ D+++K P +SY++L+ LC +G
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
EA R + ++ SK +P V+ N +++ C G + L +M P ++YN L
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 315 IGSLAYHGKTDHALKVLDEM--VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
I A ++ +M +G P +YN I+ C + ++ L +M R
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 373 RCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAF 432
P+ TY + I + +AF
Sbjct: 687 GVNPDRSTYTCM----------------------------------INGFVSQDNLTEAF 712
Query: 433 QLLYEMTKYGFTPD 446
++ EM + GF+PD
Sbjct: 713 RIHDEMLQRGFSPD 726
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 384 LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGF 443
+ L +G V+ A+ + Q + ++ +LC+ GK + L ++ + G
Sbjct: 207 IGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV 266
Query: 444 TPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLE 503
PD TY++LI +GL+EEA E+ M + P V +N ++ GLCK + + + E
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 504 VFQMMIEKGQMPNETTY-TILVEGIAHQDELELSAEVLKELQLRQVVSE 551
VF M+ G P+ TTY ++L+E D +E + +V +++ R VV +
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE-TEKVFSDMRSRDVVPD 374
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 223/475 (46%), Gaps = 25/475 (5%)
Query: 89 MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
M++ G + + ++ LC A K +KA V+ M+ G IPD S+Y+ ++N LC
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
+ A L E+M+ G + TY +V C G + Q+ ++ + + + G PN TY+
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF------R 262
L+ A K + V A +L + ++++G PN+V+Y+ L+ G CK G+ E+A + F +
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 263 DLPS-----KGFE-----PNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYN 312
D+P K ++ PNVV+Y LL C R EEA +LL M P + Y+
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
LI L GK D A +V EM + F + +Y+ +I R + DL K L +M
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 373 RCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA 431
C PN Y + LC VGK EA+ ++Q + K Y +I GK
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLG 491
+LL M G P+ TY LI C G ++ A + M++ + + ++ G
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Query: 492 LCKSRRTDLSLEVFQMMIEKGQ---MPNETTYTILVEGIAHQDELELSAEVLKEL 543
K +E ++ E GQ P + Y +L++ + LE++ +L+E+
Sbjct: 859 FNKE-----FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 235/495 (47%), Gaps = 25/495 (5%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K AF + M+ +G PD + +L LC A+KM+ A + E M G++ D +YT
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+V+ CK G + A + +M + G N VTY +L+ ++ + + + ++ +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK----------------GGKPNLVSY 241
G +PN TYS L++ K V A ++ + + +PN+V+Y
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
LL G CK R EEA + + +G EPN + Y+ L+ LC G+ +EA E+ EM
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDL 361
T+ TY+ LI + D A KVL +M++ P+ Y +I LC GK D
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 362 VVKCLDQMFHRRCKPNEGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
K + M + C+PN TY AM+ G +GK++ +++ +G+K + Y+ +
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYT--AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
I C+ G A LL EM + + + Y +I G E + E+L + + + D
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDT 878
Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMM--IEKGQMPNETTYTILVEGIAHQDELELS 536
P + + L+ L K++R +++L + + + + +TY L+E + +++E +
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 537 AEVLKELQLRQVVSE 551
++ E+ + V+ E
Sbjct: 939 FQLFSEMTKKGVIPE 953
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 228/503 (45%), Gaps = 31/503 (6%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
L RM + P+VV + LL ++ + +V+ MM+ G P + LV+ C
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384
Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCM-LGNLNQSLQFL-----DRLIQKGL 199
G+ YA +L++KM G+ V YN L+ +C +LN L L ++ G+
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
V N S A ++ ++I +G P+ +Y+ +L LC + E A
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLA 319
F ++ G +V +Y I++ S C G E+A + EM +P +VTY LI +
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 320 YHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC----- 374
K +A ++ + M+ P+ +Y+ +I C G+V+ Q+F R C
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC----QIFERMCGSKDV 620
Query: 375 ---------------KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYV 418
+PN TY L C +V+EA ++ ++ + Q Y +
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 419 ITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDY 478
I LC+ GK +A ++ EM+++GF YTYSSLI + A ++ M E
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 479 KPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAE 538
P+V + ++ GLCK +TD + ++ QMM EKG PN TYT +++G ++E E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 539 VLKELQLRQVVSESAVERLVMQY 561
+L+ + + V R+++ +
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDH 823
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 193/401 (48%), Gaps = 21/401 (5%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSY--------- 136
E M+S+G P++V + L+ CKA +++KA ++ E M S +PD Y
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 137 -----TY--LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
TY L++ CK V A +L++ M G N + Y++L+ GLC +G L+++ +
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
+ + G +TYS L++ +K + A K+L ++ PN+V Y ++ GLC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
K G+T+EA + + + KG +PNVV+Y ++ M G+ E ELL M +P V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
TY +LI +G D A +L+EM + + A Y +I E L + LD++
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL--LDEI 873
Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNS--SPQEFYKYVITSLCRKG 426
P Y L L +++ A +++ + + Y +I SLC
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
K AFQL EMTK G P+ ++ SLI+GL I EAL
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 232/496 (46%), Gaps = 31/496 (6%)
Query: 82 AFLQLERMVSKGHKPDVVQATNLLYDLC------KANKMKKAIKVMEMMVSSGIIPDASS 135
A+ L++MV GH P V L+ +C + + A K M+++G++ + +
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
+ CLC G A ++ +M G+ +T TY+ ++ LC + + + +
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
+ GLV + +TY+ ++++ K + A K +++ G PN+V+Y L+ K +
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
A F + S+G PN+V+Y+ L+ C G+ E+A ++ M G P +
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV------- 623
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
D K D+ + RP+ +Y ++ C +V+ K LD M C+
Sbjct: 624 ---------DMYFKQYDDNSE---RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671
Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKY--VITSLCRKGKTYQAF 432
PN+ Y+ L LC VGK+ EA + + ++ P Y Y +I + + A
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMS--EHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 433 QLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGL 492
++L +M + P+ Y+ +I GLC G +EA ++ +MEE +P+V + A++ G
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 493 CKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSES 552
+ + LE+ + M KG PN TY +L++ L+++ +L+E++ + +
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 553 AVERLVMQ-YDFEGIE 567
A R V++ ++ E IE
Sbjct: 850 AGYRKVIEGFNKEFIE 865
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 204/440 (46%), Gaps = 30/440 (6%)
Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF-----LDR 193
LV C+ G+ A++ + +++D+ + + TYN L++ L+ + L
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
L G F YS ++E A+ L++ + P+ V Y L++GLC+
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWRE-----ALTLVE---TENFVPDTVFYTKLISGLCEASL 317
Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCME----GRWEEANELLAEMDGGDRSPTIV 309
EEA+ F + + PNVV+Y+ LL C+ GR + ++ M+G SP I
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMM-MEGCYPSPKI- 374
Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGK------VDLVV 363
+N L+ + G +A K+L +MVK P YN +I +C + +DL
Sbjct: 375 -FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 364 KCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
K +M N+ + LC GK ++AF++I+ + + Y V+ L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
C K AF L EM + G D YTY+ ++ C GLIE+A + F M E P+V
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553
Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
+ AL+ K+++ + E+F+ M+ +G +PN TY+ L++G ++E + ++ +
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 543 LQLRQVVSESAVERLVMQYD 562
+ + V + V+ QYD
Sbjct: 614 MCGSKDVPD--VDMYFKQYD 631
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 217/495 (43%), Gaps = 32/495 (6%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R+ + A +L R+ +P L+ KA+++ A + M + + D
Sbjct: 212 RNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGF 271
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+ LCK G A+ LVE + +TV Y L+ GLC +++ FL+R+
Sbjct: 272 TLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 328
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+PN TYS LL ++ + ++L+ ++ +G P+ +N L+ C G
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 388
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGR------WEEANELLAEMDGGDRSPTI 308
A + + + G P V YNIL+ S+C + + A + +EM
Sbjct: 389 SYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNK 448
Query: 309 VTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQ 368
+ + L GK + A V+ EM+ F P ++Y+ ++ LC+ K++L ++
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508
Query: 369 MFHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCR 424
M + TY + C G +++A F ++ +G N Y +I + +
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT---YTALIHAYLK 565
Query: 425 KGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM----------- 473
K A +L M G P+ TYS+LI G C G +E+A +IF M
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 474 --EEYD---YKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIA 528
++YD +P+V + ALL G CKS R + + ++ M +G PN+ Y L++G+
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 529 HQDELELSAEVLKEL 543
+L+ + EV E+
Sbjct: 686 KVGKLDEAQEVKTEM 700
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 158/388 (40%), Gaps = 30/388 (7%)
Query: 183 NLNQSLQFL-DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNL--- 238
+L + FL D L+ G V + +++ R + A+ +DD+ + + L
Sbjct: 67 DLTKEYSFLHDSLVDYGNVNVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQF 126
Query: 239 ---VSYNVLLTGLCKEGRTEEAIRFFRDLPSK-GFEPNVVSYNILLRSLCMEGRWEEANE 294
+S ++++ L R I FF + G++ YN L+ + + + E
Sbjct: 127 REKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEE 186
Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLC 354
L ++ D+ N+L+ +G AL+ L + RFRPS ++YN +I
Sbjct: 187 FLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFL 246
Query: 355 SEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM------LCGVGKVQEAFAIIQSLGNKQN 408
++D + HR +G + LC VGK +EA ++++ +N
Sbjct: 247 KADRLDSA-----SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET----EN 297
Query: 409 SSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEAL 467
P FY +I+ LC +A L M P+ TYS+L+ G + +
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 468 EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGI 527
+ +M P FN+L+ C S + ++ + M++ G MP Y IL+ I
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 528 A------HQDELELSAEVLKELQLRQVV 549
+ D L+L+ + E+ VV
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 230/497 (46%), Gaps = 36/497 (7%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
L+ M+ + PDV L+ LC +K+ +M+ M SG P +Y +++ CK
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
KG A++L++ M+ G + TYN L+ LC + + L + ++ + PN T
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
Y+ L+ E V A +LL+++++ G PN V++N L+ G EG +EA++ F +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
+KG P+ VSY +LL LC ++ A M +TY +I L +G D
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
A+ +L+EM K P +Y+ +I C G+ + + +++ PN Y+ L
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 386 M-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT---------------- 428
C +G ++EA I +++ + ++ + ++TSLC+ GK
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 429 -------------------YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEI 469
+AF + EMTK G P +TY SL++GLC G + EA +
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 470 FVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
+ D +N LL +CKS ++ +F M+++ +P+ TYT L+ G+
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 530 QDELELSAEVLKELQLR 546
+ + ++ KE + R
Sbjct: 661 KGKTVIAILFAKEAEAR 677
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 212/480 (44%), Gaps = 2/480 (0%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D + +A M +KG P V LL LCK + A M +G+
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
+YT +++ LCK G + A+ L+ +M G + VTY++L+ G C +G + +
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
+ R+ + GL PN YS L+ + + A+++ + +I +G + ++NVL+T LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+ EA F R + S G PN VS++ L+ G +A + EM PT T
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 580
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
Y L+ L G A K L + YN ++ +C G + V +M
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640
Query: 371 HRRCKPNEGTYNGL-AMLCGVGKVQEAFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKT 428
R P+ TY L + LC GK A + + N P + Y + + + G+
Sbjct: 641 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700
Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
+M G TPD T +++I G G IE+ ++ M + P++ +N L
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
L G K + S +++ +I G +P++ T LV GI + LE+ ++LK R V
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/586 (23%), Positives = 250/586 (42%), Gaps = 108/586 (18%)
Query: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
L +A E M+ +GH D L+ LCKA K+ +A + M M S GI+P+ S+
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 139 LVNC-----------------------------------LCKKGNVGYAMQLVEKMEDYG 163
L+N LCK G++ A + ++ +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
+TV YN+L+ +C GNL +++ ++Q+ ++P+++TY+ L+ ++ A+
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 224 KLLDDIIAKGGK-PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRS 282
+ A+G PN V Y + G+ K G+ + I F + + G P++V+ N ++
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 283 LCMEGRWEEANELLAEMDGGDRSPTIVTYNILIG----------------SLAYHGK--- 323
G+ E+ N+LL EM + P + TYNIL+ S+ +G
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 324 --TDHAL--------------KVLDEMVKGRFRPSAASYNPIIARLCSEGKV-------- 359
T H+L K+L + ++N +I++ C+ G++
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 360 --------------DLVVKCLDQ---------MFHRRCK----PNEGTYNGLAM-LCGVG 391
D +V L++ + H K P Y GL LC VG
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908
Query: 392 KVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYS 451
++ AF + + + + P ++ +L + GK +A LL M K P +++
Sbjct: 909 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968
Query: 452 SLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEK 511
+L+ C G + EALE+ VVM K D+ ++N L+ GLC L+ E+++ M
Sbjct: 969 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028
Query: 512 GQMPNETTYTILVEG-IAHQDELELSAEVLKELQLRQVVSESAVER 556
G + N TTY L+ G +A + + +LK+L R ++ ++ +
Sbjct: 1029 GFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 188/411 (45%), Gaps = 1/411 (0%)
Query: 132 DASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFL 191
+ S Y L+ ++G + ++++ M YG+ + T N+++ + G FL
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 192 DRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKE 251
++++ + P+ T++ L+ E + L+ + G P +V+YN +L CK+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 252 GRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTY 311
GR + AI + SKG + +V +YN+L+ LC R + LL +M P VTY
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 312 NILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFH 371
N LI + GK A ++L+EM+ P+ ++N +I SEG +K M
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 372 RRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQ 430
+ P+E +Y L LC + A + + Y +I LC+ G +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 431 AFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL 490
A LL EM+K G PD TYS+LI G C G + A EI + P+ ++ L+
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481
Query: 491 GLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLK 541
C+ ++ +++ MI +G + T+ +LV + ++ + E ++
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 219/522 (41%), Gaps = 47/522 (9%)
Query: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
L++A + L M G PD+V + L+ CK + K A +++ + G+ P+ Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
L+ C+ G + A+++ E M G+ + T+N LV LC G + ++ +F+ + G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
++PN ++ L+ A + D++ G P +Y LL GLCK G EA
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
+F + L + + V YN LL ++C G +A L EM P TY LI L
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 319 AYHGKTDHALKVLDEM-VKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
GKT A+ E +G P+ Y + + G+ + +QM + P+
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718
Query: 378 EGTYNGLAMLCG---VGKVQEAFAIIQSLGNKQNSSPQ-------------------EFY 415
T N AM+ G +GK+++ ++ +GN QN P F
Sbjct: 719 IVTTN--AMIDGYSRMGKIEKTNDLLPEMGN-QNGGPNLTTYNILLHGYSKRKDVSTSFL 775
Query: 416 KY-----------------VITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLC 458
Y ++ +C ++L G D YT++ LI C
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835
Query: 459 MEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
G I A ++ VM D D +A++ L ++ R S V M ++G P
Sbjct: 836 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895
Query: 519 TYTILVEGIAHQDELELSAEVLKELQLRQV----VSESAVER 556
Y L+ G+ +++ + V +E+ ++ V+ESA+ R
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 1/360 (0%)
Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
+N Y+ L+R G + SL+ + G P+ +T + +L + K +
Sbjct: 121 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180
Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
L +++ + P++ ++N+L+ LC EG E++ + + G+ P +V+YN +L C
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
+GR++ A ELL M + TYN+LI L + +L +M K P+ +
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLG 404
YN +I +EGKV + + L++M PN T+N L G +EA + +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
K + + Y ++ LC+ + A M + G TY+ +I GLC G ++
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
EA+ + M + PD+ ++AL+ G CK R + E+ + G PN Y+ L+
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
++N AF ++ M S G D ++ L + ++ +++ V+ M GI P++ Y
Sbjct: 839 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+N LC+ G++ A + E+M + V +++VR L G +++ L +++
Sbjct: 899 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
LVP +++ L+ K V A++L + G K +LVSYNVL+TGLC +G A
Sbjct: 959 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1018
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSL 283
+ ++ GF N +Y L+R L
Sbjct: 1019 FELYEEMKGDGFLANATTYKALIRGL 1044
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 371 HRRCKPNEGTYNGLAML-CGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTY 429
+R C N Y+ L + G +Q++ I + +G + ++ S+ + G+
Sbjct: 116 YRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 175
Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
+ L EM K PD T++ LI LC EG E++ + ME+ Y P + +N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQV 548
CK R ++E+ M KG + TY +L+ + + + +L++++ R +
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 229/496 (46%), Gaps = 35/496 (7%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
DT ++++ ++ M G +P+V LL LCK NK+ A K++ M + G
Sbjct: 154 DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 213
Query: 131 PDASSYTY------------------------------LVNCLCKKGNVGYAMQLVEKME 160
PDA SYT L+N LCK+ + A +L+ +M
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 161 DYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVH 220
+ G N ++Y++L+ LC G + + FL +++++G PN +T S L++ +
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 221 AAMKLLDDIIAKGG-KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNIL 279
A+ L + +I G +PN+V+YN L+ G C G +A+ F + G PN+ +Y L
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 280 LRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRF 339
+ G + A + +M P +V Y ++ +L H K A +++ M K
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 340 RPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR-RCKPNEGTYNGLA-MLCGVGKVQEAF 397
PS ++N I LC G++D K QM + RC PN TYN L L +++EA+
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 398 AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGL 457
+ + + + Y ++ C G A QL+ +M G +PD T + +I
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 458 CMEGLIEEALEIF--VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMP 515
C +G E A ++ V ++PDV ++ ++ GLC+S + + + + MI G +P
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 516 NETTYTILVEGIAHQD 531
+ T+++L+ D
Sbjct: 634 SIATWSVLINCFILDD 649
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 215/461 (46%), Gaps = 18/461 (3%)
Query: 88 RMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKG 147
R+ G P V ++L L N+++ V M G P+ +Y L+ LCK
Sbjct: 136 RIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 195
Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
V A +L+ +M + G + V+Y +++ +C +G + + + +R P Y+
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYN 250
Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
L+ KE A +L+ +++ KG PN++SY+ L+ LC G+ E A F + +
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDH 326
G PN+ + + L++ + G +A +L +M G P +V YN L+ HG
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 327 ALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTY-NGLA 385
A+ V M + P+ +Y +I G +D V ++M C PN Y N +
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 386 MLCGVGKVQEAFAIIQSLGNKQNSSPQ-EFYKYVITSLCRKGKTYQAFQLLYEM-TKYGF 443
LC K +EA ++I+ + +K+N +P + I LC G+ A ++ +M ++
Sbjct: 431 ALCRHSKFKEAESLIEIM-SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 444 TPDSYTYSSLIRGLCMEGLIEEAL----EIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
P+ TY+ L+ GL IEEA EIF+ E+ +N LL G C +
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSS----STYNTLLHGSCNAGLPG 545
Query: 500 LSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
++L++ M+ G+ P+E T +++ Q + E +A++L
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 198/441 (44%), Gaps = 41/441 (9%)
Query: 115 KKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSL 174
++A+++ + G P Y ++++ L + + + M+ G+ N TYN L
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 187
Query: 175 VRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGG 234
++ LC ++ + + L + KG P+A +Y+ ++ + + V +L A+
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERF 242
Query: 235 KPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANE 294
+P + YN L+ GLCKE + A R++ KG PNV+SY+ L+ LC G+ E A
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 295 LLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKG-RFRPSAASYNPIIARL 353
L +M P I T + L+ G T AL + ++M++G +P+ +YN ++
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 354 CSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQE 413
CS G + V M C PN TY L
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL----------------------------- 393
Query: 414 FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVM 473
I ++G A + +M G P+ Y++++ LC +EA + +M
Sbjct: 394 -----INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 474 EEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM-PNETTYTILVEGIAHQDE 532
+ + P V FNA + GLC + R D + +VF+ M ++ + PN TY L++G+A +
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 533 LELSAEVLKELQLRQVVSESA 553
+E + + +E+ +R V S+
Sbjct: 509 IEEAYGLTREIFMRGVEWSSS 529
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 184/394 (46%), Gaps = 5/394 (1%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
++H AF + MV KG P+V+ + L+ LC + +++ A + M+ G P+
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDR 193
+ + LV +G A+ L +M +G N V YN+LV+G C GN+ +++
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377
Query: 194 LIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGR 253
+ + G PN TY L+ K + A+ + + ++ G PN+V Y ++ LC+ +
Sbjct: 378 MEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 254 TEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRS-PTIVTYN 312
+EA + + P+V ++N ++ LC GR + A ++ +M+ R P IVTYN
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 313 ILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHR 372
L+ LA + + A + E+ S+++YN ++ C+ G + ++ + +M
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 373 RCKPNEGTYNGLAML-CGVGKVQEAFAIIQ--SLGNKQNSSPQEFYKYVITSLCRKGKTY 429
P+E T N + + C GK + A ++ S G ++ Y VI LCR
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE 617
Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
LL M G P T+S LI ++ ++
Sbjct: 618 DGVILLERMISAGIVPSIATWSVLINCFILDDIV 651
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
T +T+ ++I LA G+ D +L +M F S + +I+ G + V
Sbjct: 75 TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV--- 131
Query: 367 DQMFHR----RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEF-YKYVIT 420
+MF+R C P+ YN L L G ++Q + + + + + P F Y ++
Sbjct: 132 -EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM-KRDGFEPNVFTYNVLLK 189
Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
+LC+ K A +LL EM+ G PD+ +Y+++I +C GL++E E+ ++P
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEP 244
Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
V +NAL+ GLCK + E+ + M+EKG PN +Y+ L+ + + ++EL+ L
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 541 KELQLR 546
++ R
Sbjct: 305 TQMLKR 310
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 83/175 (47%)
Query: 391 GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTY 450
G+V ++Q + + ++ + VI+ + G +A ++ Y + ++G P Y
Sbjct: 90 GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 149
Query: 451 SSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
+ ++ L E I+ ++ M+ ++P+V +N LL LCK+ + D + ++ M
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 511 KGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
KG P+ +YT ++ + ++ E+ + + V + + L ++D++G
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKG 264
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 214/437 (48%), Gaps = 1/437 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R +L+ + +E M KG KP+ +++ LC+ K+ +A + M+ GI+PD
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
YT L++ CK+G++ A + +M + +TY +++ G C +G++ ++ + +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
KGL P++ T++ L+ K + A ++ + +I G PN+V+Y L+ GLCKEG
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
+ A ++ G +PN+ +YN ++ LC G EEA +L+ E + + VTY L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
+ + G+ D A ++L EM+ +P+ ++N ++ C G ++ K L+ M +
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 375 KPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
PN T+N L C ++ A AI + + ++ + Y+ ++ C+ +A+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
L EM GF+ TYS LI+G EA E+F M D + F+
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 712
Query: 494 KSRRTDLSLEVFQMMIE 510
K +R D ++ +IE
Sbjct: 713 KGKRPDTIVDPIDEIIE 729
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 223/468 (47%), Gaps = 2/468 (0%)
Query: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCK-ANKMKKAIKVMEMMVSSGIIPDASSYT 137
L +A E+M++ G V L L K K AI V G+ + +SY
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
+++ +C+ G + A L+ ME GY + ++Y+++V G C G L++ + ++ + +K
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
GL PN++ Y ++ + + A + ++I +G P+ V Y L+ G CK G A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+FF ++ S+ P+V++Y ++ C G EA +L EM P VT+ LI
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
G A +V + M++ P+ +Y +I LC EG +D + L +M+ +PN
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
TYN + LC G ++EA ++ ++ Y ++ + C+ G+ +A ++L
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
EM G P T++ L+ G C+ G++E+ ++ M P+ FN+L+ C
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 497 RTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQ 544
+ +++ M +G P+ TY LV+G ++ + + +E++
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 227/463 (49%), Gaps = 1/463 (0%)
Query: 104 LLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYG 163
+++ +C+ ++K+A ++ +M G PD SY+ +VN C+ G + +L+E M+ G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 164 YPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAM 223
N+ Y S++ LC + L ++ + +I++G++P+ Y+ L++ K + AA
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 224 KLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSL 283
K ++ ++ P++++Y +++G C+ G EA + F ++ KG EP+ V++ L+
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 284 CMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSA 343
C G ++A + M SP +VTY LI L G D A ++L EM K +P+
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 344 ASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQS 402
+YN I+ LC G ++ VK + + + TY L C G++ +A I++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 403 LGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGL 462
+ K + ++ C G +LL M G P++ T++SL++ C+
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
++ A I+ M PD + L+ G CK+R + +FQ M KG + +TY++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFEG 565
L++G + + + EV +++ + ++ + ++G
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 73/137 (53%)
Query: 415 YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
Y VI +C+ G+ +A LL M G+TPD +YS+++ G C G +++ ++ VM+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 475 EYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELE 534
KP+ + +++ LC+ + + E F MI +G +P+ YT L++G + ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 535 LSAEVLKELQLRQVVSE 551
+++ E+ R + +
Sbjct: 369 AASKFFYEMHSRDITPD 385
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
KT A + E + G + +Y+ +I +C G I+EA + ++ME Y PDV +++
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
++ G C+ D ++ ++M KG PN Y ++ + +L + E E+ +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 547 QVVSESAV 554
++ ++ V
Sbjct: 346 GILPDTVV 353
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 430 QAFQLL-YEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
Q F LL Y +G D + + L GL+ EA +F M Y VD+ N
Sbjct: 159 QFFDLLVYTYKDWG--SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVY 216
Query: 489 LLGLCKS-RRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR- 546
L L K +T ++ VF+ E G N +Y I++ + ++ + +L ++L+
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 547 ---QVVSESAV 554
V+S S V
Sbjct: 277 YTPDVISYSTV 287
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 209/429 (48%), Gaps = 2/429 (0%)
Query: 113 KMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYN 172
K+ ++ + MV +P + ++ L++ + K + L E+M+ G P N T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 173 SLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAK 232
L+ C L+ +L FL ++I+ G P+ T+ LL + V+ A+ + D ++
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 233 GGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEA 292
G KPN+V YN ++ GLCK + + A+ + G P+VV+YN L+ LC GRW +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 293 NELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIAR 352
+++ M + P + T+N LI + G+ A + +EM++ P +Y+ +I
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 353 LCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSP 411
LC ++D + M + C P+ TY+ L C KV+ + + +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 412 QEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFV 471
Y +I CR GK A ++ M G P+ TY+ L+ GLC G IE+AL I
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 472 VMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQD 531
M++ D+ +N ++ G+CK+ + +++ + +G MP+ TYT ++ G+ ++
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL-YKK 479
Query: 532 ELELSAEVL 540
L A+ L
Sbjct: 480 GLRREADAL 488
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 213/462 (46%), Gaps = 7/462 (1%)
Query: 64 RKPGNNNDTRH------RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKA 117
R N +D R R KL+D+ MV P + + LL + K K
Sbjct: 41 RAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVV 100
Query: 118 IKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRG 177
I + E M GI + + L+NC C+ + A+ + KM G+ + VT+ SL+ G
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 178 LCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPN 237
C + +L D+++ G PN Y+ +++ K + V A+ LL+ + G P+
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 238 LVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
+V+YN L++GLC GR +A R + + P+V ++N L+ + EGR EA E
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEG 357
EM P IVTY++LI L + + D A ++ MV P +Y+ +I C
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 358 KVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYK 416
KV+ +K +M R N TY L C GK+ A I + + Y
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 417 YVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEY 476
++ LC GK +A +L +M K G D TY+ +IRG+C G + +A +I+ +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 477 DYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNET 518
PD+ + ++LGL K + +F+ M E G +PNE
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 173/379 (45%), Gaps = 36/379 (9%)
Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
+N Y ++R L+ SL ++Q +P+ +S LL A K + + L
Sbjct: 44 SNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYL 103
Query: 226 LDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCM 285
+ + G NL + N+LL C+ + A+ F + G EP++V++ LL C
Sbjct: 104 WEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR 163
Query: 286 EGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAAS 345
R +A + +M G P +V YN +I L + D+AL +L+ M K P +
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 346 YNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLC-GVGKVQEAFAIIQSLG 404
YN +I+ LCS G+ + + M R P+ T+N L C G+V EA
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA-------- 275
Query: 405 NKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE 464
+EFY+ EM + PD TYS LI GLCM ++
Sbjct: 276 -------EEFYE--------------------EMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 465 EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILV 524
EA E+F M PDV ++ L+ G CKS++ + +++F M ++G + N TYTIL+
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 525 EGIAHQDELELSAEVLKEL 543
+G +L ++ E+ + +
Sbjct: 369 QGYCRAGKLNVAEEIFRRM 387
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 143/325 (44%), Gaps = 34/325 (10%)
Query: 236 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANEL 295
P++ ++ LL+ + K + + I + + G N+ + NILL C + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 296 LAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCS 355
L +M P+IVT+ L+ + AL + D+MV ++P+ YN II LC
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 356 EGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFY 415
+VD + L++M P+ TYN L
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSL------------------------------- 227
Query: 416 KYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEE 475
I+ LC G+ A +++ MTK PD +T+++LI EG + EA E + M
Sbjct: 228 ---ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 476 YDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELEL 535
PD+ ++ L+ GLC R D + E+F M+ KG P+ TY+IL+ G ++E
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 536 SAEVLKELQLRQVVSESAVERLVMQ 560
++ E+ R VV + +++Q
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQ 369
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 236/503 (46%), Gaps = 39/503 (7%)
Query: 82 AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
A++ RM + G ++ ++ LCK + A M ++ G + D+ T L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 142 CLCKKGNVGYAMQLVEKM-EDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLV 200
C+ N+ A+++ + M ++ N+V+Y+ L+ GLC +G L ++ D++ +KG
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 201 PNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRF 260
P+ TY+ L++A + A L D++I +G KPN+ +Y VL+ GLC++G+ EEA
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 261 FRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEM--------------------- 299
R + P+V++YN L+ C +GR A ELL M
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 300 ---------------DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAA 344
D G SP IV+YN+LI L G + A K+L M P
Sbjct: 419 VGKPYKAVHLLKRMLDNG-LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 345 SYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSL 403
++ II C +GK D+ L M + +E T L +C VGK ++A I+++L
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 404 GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLI 463
+ + ++ L + K + +L ++ K G P TY++L+ GL G I
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 464 EEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTIL 523
+ I +M+ P+V + ++ GLC+ R + + ++ M + G PN TYT++
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 524 VEGIAHQDELELSAEVLKELQLR 546
V+G + +L+ + E ++ + R
Sbjct: 658 VKGYVNNGKLDRALETVRAMVER 680
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 232/472 (49%), Gaps = 11/472 (2%)
Query: 96 PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
P+ V + L++ LC+ ++++A + + M G P +YT L+ LC +G + A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
++M G N TY L+ GLC G + ++ ++++ + P+ TY+ L+ K
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
+ V A +LL + + KPN+ ++N L+ GLC+ G+ +A+ + + G P++VS
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
YN+L+ LC EG A +LL+ M+ D P +T+ +I + GK D A L M+
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNG-LAMLCGVGKVQ 394
+ + +I +C GK + L+ + R + N L ML KV+
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 395 EAFAIIQSLGNKQNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSL 453
E A++ + NK P Y ++ L R G +F++L M G P+ Y Y+ +
Sbjct: 564 EELAMLGKI-NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 454 IRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
I GLC G +EEA ++ M++ P+ + ++ G + + D +LE + M+E+G
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Query: 514 MPNETTYTILVEG-IAHQDELELSAE-VLKELQLRQVVSE------SAVERL 557
N+ Y+ L++G + Q ++ S E + ++ LR+ E S VE+L
Sbjct: 683 ELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL 734
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 22/408 (5%)
Query: 86 LERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCK 145
L+RM+ G PD+V L+ LC+ M A K++ M I PD ++T ++N CK
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 146 KGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFT 205
+G A + M G + VT +L+ G+C +G +L L+ L++ ++ +
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 206 YSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 265
+ +L+ K V + +L I G P++V+Y L+ GL + G + R +
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 266 SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
G PNV Y I++ LC GR EEA +LL+ M SP VTY +++ +GK D
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 326 HALKVLDEMVKGRFRPSAASYNPIIAR--LCSEGKVDLVVKCLDQMFHRRCKP---NE-- 378
AL+ + MV+ + + Y+ ++ L +G + + + R P NE
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELI 728
Query: 379 -------GTYNGLAM-----LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
G +GL + LC G+ E+ ++Q++ ++ ++ ++ S C K
Sbjct: 729 SVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNV-LERGVFLEKAMDIIMESYCSKK 787
Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVME 474
K + +L+ + K GF P ++ +I+GL EG E A E+ VME
Sbjct: 788 KHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL--VME 833
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 220/511 (43%), Gaps = 38/511 (7%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D RD K+ +A +MV P V+ L+ CK ++ A +++ +M
Sbjct: 344 DGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ ++ L+ LC+ G A+ L+++M D G + V+YN L+ GLC G++N + +
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
L + + P+ T++ ++ A K+ A L ++ KG + V+ L+ G+CK
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
G+T +A+ L S N++L L + +E +L +++ P++VT
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT 583
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
Y L+ L G + ++L+ M P+ Y II LC G+V+ K L M
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 371 HRRCKPNEGTYNGLAMLCGV---GKVQEAFAIIQSLGNKQNSSPQEFYKYVITS--LCRK 425
PN TY M+ G GK+ A ++++ + Y ++ L +K
Sbjct: 644 DSGVSPNHVTYT--VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Query: 426 GKTYQAFQLLYEMTKYGFTPDSYT--------YSSLIRGLCM--------EG-------L 462
G + ++ P+ I GLC+ EG L
Sbjct: 702 GIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDL 761
Query: 463 IEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTI 522
++ LE V +E+ + ++ C ++ +E+ ++++ G +P+ ++ +
Sbjct: 762 VQNVLERGVFLEK--------AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCL 813
Query: 523 LVEGIAHQDELELSAEVLKELQLRQVVSESA 553
+++G+ + + E + E++ EL V E +
Sbjct: 814 VIQGLKKEGDAERARELVMELLTSNGVVEKS 844
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 230/475 (48%), Gaps = 16/475 (3%)
Query: 82 AFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVN 141
AF M+ P++ L+ L K + A K+ + M GI P+ +YT L++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 142 CLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVP 201
LC++G+ A +L +M+ G ++V +N+L+ G C LG + ++ + L + G V
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 202 NAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFF 261
YS L++ ++ R A +L +++ K KP+++ Y +L+ GL K G+ E+A++
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 262 RDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYH 321
+PSKG P+ YN ++++LC G EE L EM + P T+ ILI S+ +
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 322 GKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM--------FHRR 373
G A ++ E+ K PS A++N +I LC G++ L +M F R
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 374 CKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
+++ + G + +A+ + + +S Y +I CR G A +
Sbjct: 482 SHSGNRSFDTMV---ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
LL + G +PDS TY++LI GL G EEA ++F +++ + P V + +L+ C
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSC 596
Query: 494 KSRRTDLSLEVFQMMIEK-GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQ 547
+ R+ ++ ++ ++K + +ET I E + E E + L EL R+
Sbjct: 597 RKRKVLVAFNLWMKYLKKISCLDDETANEI--EQCFKEGETERALRRLIELDTRK 649
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 203/473 (42%), Gaps = 60/473 (12%)
Query: 67 GNNNDTRHRDHKLNDAFLQLERMVS----------KGHKPDVVQATNLLYDLCKANKMKK 116
GN D+ + L D F +L RMV G + ++L+ L +A + +
Sbjct: 263 GNYPDSVAHNALL-DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQ 321
Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
A ++ M+ I PD YT L+ L K G + A++L+ M G +T YN++++
Sbjct: 322 AFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381
Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
LC G L + + + P+A T++ L+ + + V A ++ +I G P
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSP 441
Query: 237 NLVSYNVLLTGLCKEGRTEEA------------------------------------IRF 260
++ ++N L+ GLCK G +EA ++
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKA 501
Query: 261 FRDLP---SKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+RDL G P++VSYN+L+ C G + A +LL + SP VTYN LI
Sbjct: 502 YRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
L G+ + A K+ K FR S A Y ++ C + KV + + + +
Sbjct: 562 LHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLD 619
Query: 378 EGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQA---FQL 434
+ T N + G+ + A + L +++ Y + LC+ G+ ++A F +
Sbjct: 620 DETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSV 679
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYK--PDVDNF 485
L E K TP S LI GLC ++ A+E+F+ + ++K P V N+
Sbjct: 680 LRE-KKILVTPPSCV--KLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNY 729
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 177/370 (47%), Gaps = 14/370 (3%)
Query: 189 QFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGL 248
Q L+ L G+ +++ + L+ A K A++ + +P++ +YNV+L +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 249 CKEGRT-EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPT 307
+E A + ++ PN+ ++ IL+ L +GR +A ++ +M G SP
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 308 IVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLD 367
VTY ILI L G D A K+ EM P + ++N ++ C G++ + L
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL- 291
Query: 368 QMFHRRCKPNEGTYNGL----AMLCGVGKVQ---EAFAIIQSLGNKQNSSPQEFYKYVIT 420
++F + +G GL +++ G+ + + +AF + ++ K Y +I
Sbjct: 292 RLFEK-----DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQ 346
Query: 421 SLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKP 480
L + GK A +LL M G +PD+Y Y+++I+ LC GL+EE + + M E + P
Sbjct: 347 GLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406
Query: 481 DVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
D L+ +C++ + E+F + + G P+ T+ L++G+ EL+ + +L
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Query: 541 KELQLRQVVS 550
++++ + S
Sbjct: 467 HKMEVGRPAS 476
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 3/240 (1%)
Query: 57 SVYTKPNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKK 116
S++ + + + DT + A+ L G PD+V L+ C+A +
Sbjct: 476 SLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 535
Query: 117 AIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVR 176
A+K++ ++ G+ PD+ +Y L+N L + G A +L +D+ + + Y SL+
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH--SPAVYRSLMT 593
Query: 177 GLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKP 236
C + + + ++K + T + +E +KE A++ L ++ + +
Sbjct: 594 WSCRKRKVLVAFNLWMKYLKKISCLDDETAN-EIEQCFKEGETERALRRLIELDTRKDEL 652
Query: 237 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELL 296
L Y + L GLC+ GR EA+ F L K S L+ LC + + A E+
Sbjct: 653 TLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 36/149 (24%)
Query: 432 FQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLL- 490
+Q L E+ G + DSY + LI G+ E+A+E F M+E+D +PDV +N +L
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 491 -----------------------------------GLCKSRRTDLSLEVFQMMIEKGQMP 515
GL K RT + ++F M +G P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 516 NETTYTILVEGIAHQDELELSAEVLKELQ 544
N TYTIL+ G+ + + + ++ E+Q
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQ 260
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 209/422 (49%), Gaps = 2/422 (0%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
R K+N+A+ L+RM +G PDVV T L+ LC A K+ A +V E M + PD
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y L++ ++ Q +ME G+ + VT+ LV LC GN ++ LD +
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
+G++PN TY+ L+ + + A++L ++ + G KP +Y V + K G +
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
A+ F + +KG PN+V+ N L SL GR EA ++ + P VTYN++
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRC 374
+ + G+ D A+K+L EM++ P N +I L +VD K +M +
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Query: 375 KPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQ 433
KP TYN LA L GK+QEA + + + K + + LC+ + A +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 434 LLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLC 493
+L++M G PD +TY+++I GL G ++EA+ F M++ Y PD LL G+
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVV 688
Query: 494 KS 495
K+
Sbjct: 689 KA 690
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 236/561 (42%), Gaps = 112/561 (19%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
+T ++ ++++A+ RM KP VV LL L K K+++AI++ E MV G
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ ++ L +CLCK V A++++ KM D G + TYN+++ GL G + +++ F
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMK--------------------LLDDII 230
++ +K + P+ T LL K + A K L+ I+
Sbjct: 666 FHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL 724
Query: 231 AKGGKPNLVSYN--VLLTGLCKEGRT---------------------------------- 254
A+ G N VS++ ++ G+C++G +
Sbjct: 725 AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784
Query: 255 -----------------EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLA 297
E A F + S G P+V +YN LL + G+ +E EL
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 298 EMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSE 356
EM + +T+NI+I L G D AL + +++ R F P+A +Y P+I L
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 357 GKVDLVVKCLDQMFHRRCKPNEGTYNGLA------------------------------- 385
G++ + + M C+PN YN L
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 386 -----MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEM-T 439
LC VG+V E + L + Y +I L + + +A L EM T
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 440 KYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTD 499
G TPD YTY+SLI L + G++EEA +I+ ++ +P+V FNAL+ G S + +
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Query: 500 LSLEVFQMMIEKGQMPNETTY 520
+ V+Q M+ G PN TY
Sbjct: 1085 HAYAVYQTMVTGGFSPNTGTY 1105
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 220/463 (47%), Gaps = 1/463 (0%)
Query: 79 LNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTY 138
L A L +M G + L++ L K+ +A++V M+ G P +Y+
Sbjct: 169 LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228
Query: 139 LVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKG 198
L+ L K+ ++ M L+++ME G N T+ +R L G +N++ + L R+ +G
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
Query: 199 LVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 258
P+ TY+ L++A R + A ++ + + KP+ V+Y LL +
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK 348
Query: 259 RFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSL 318
+F+ ++ G P+VV++ IL+ +LC G + EA + L M P + TYN LI L
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
+ D AL++ M +P+A +Y I G ++ ++M + PN
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 379 GTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYE 437
N L L G+ +EA I L + Y ++ + G+ +A +LL E
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Query: 438 MTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRR 497
M + G PD +SLI L ++EA ++F+ M+E KP V +N LL GL K+ +
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 498 TDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVL 540
++E+F+ M++KG PN T+ L + + DE+ L+ ++L
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 210/457 (45%), Gaps = 2/457 (0%)
Query: 89 MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSS-GIIPDASSYTYLVNCLCKKG 147
M+ K KPD+ + + L + + + + ++ + Y++ L G
Sbjct: 73 MIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDG 132
Query: 148 NVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYS 207
+ + + M+ +T TY ++ + L + G L Q+ L ++ + G V NA++Y+
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 208 FLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSK 267
L+ K R AM++ +I +G +P+L +Y+ L+ GL K + + +++ +
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252
Query: 268 GFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHA 327
G +PNV ++ I +R L G+ EA E+L MD P +VTY +LI +L K D A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 328 LKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA-M 386
+V ++M GR +P +Y ++ R +D V + +M P+ T+ L
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 387 LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPD 446
LC G EAF + + ++ Y +I L R + A +L M G P
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 447 SYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQ 506
+YTY I G ALE F M+ P++ NA L L K+ R + ++F
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492
Query: 507 MMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
+ + G +P+ TY ++++ + E++ + ++L E+
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 11/383 (2%)
Query: 114 MKKAIKVMEMMVSSGIIPDASSYTY-LVNCLCKKGNVGYAMQLVEKM-EDYGYPTNTVTY 171
+ A+ E +V++GI D S ++ CK NV A L EK +D G TY
Sbjct: 729 IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTY 788
Query: 172 NSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIA 231
N L+ GL + + ++ G +P+ TY+FLL+A K + +L ++
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 232 KGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPS-KGFEPNVVSYNILLRSLCMEGRWE 290
+ N +++N++++GL K G ++A+ + DL S + F P +Y L+ L GR
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 291 EANELLAEM-DGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPI 349
EA +L M D G R P YNILI G+ D A + MVK RP +Y+ +
Sbjct: 909 EAKQLFEGMLDYGCR-PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 967
Query: 350 IARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAMLCGVGK---VQEAFAIIQSLGNK 406
+ LC G+VD + ++ P+ YN ++ G+GK ++EA + +
Sbjct: 968 VDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN--LIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 407 QNSSPQEF-YKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
+ +P + Y +I +L G +A ++ E+ + G P+ +T+++LIRG + G E
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 466 ALEIFVVMEEYDYKPDVDNFNAL 488
A ++ M + P+ + L
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 146/306 (47%), Gaps = 5/306 (1%)
Query: 81 DAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLV 140
D FLQ++ S G PDV LL K+ K+ + ++ + M + + ++ ++
Sbjct: 806 DVFLQVK---STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 141 NCLCKKGNVGYAMQLV-EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGL 199
+ L K GNV A+ L + M D + TY L+ GL G L ++ Q + ++ G
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922
Query: 200 VPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIR 259
PN Y+ L+ K AA L ++ +G +P+L +Y+VL+ LC GR +E +
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Query: 260 FFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR-SPTIVTYNILIGSL 318
+F++L G P+VV YN+++ L R EEA L EM +P + TYN LI +L
Sbjct: 983 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Query: 319 AYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNE 378
G + A K+ +E+ + P+ ++N +I GK + M PN
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102
Query: 379 GTYNGL 384
GTY L
Sbjct: 1103 GTYEQL 1108
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 396 AFAIIQSL-GNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
+F+ +S+ GN E Y++ +L GK + + M K D+ TY ++
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIF 160
Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQM 514
+ L ++G +++A M E+ + + ++N L+ L KSR ++EV++ MI +G
Sbjct: 161 KSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR 220
Query: 515 PNETTYTILVEGIAHQDELELSAEVLKELQ 544
P+ TY+ L+ G+ + +++ +LKE++
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 215/460 (46%), Gaps = 54/460 (11%)
Query: 96 PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
PD L+ LCK ++ +A+ +++ M S G P Y L++ LCKKG++ +L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
V+ M G N VTYN+L+ GLC+ G L++++ L+R++ +PN TY L+ K
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
+R A++LL + +G N Y+VL++GL KEG+ EEA+ +R + KG +PN+V
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
Y++L+ LC EG+ EA E+L M P TY+ L+ G + A++V EM
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
K + Y+ +I LC G+V + +M KP+ Y+ + LCG+G +
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
A + + LC++ Q PD TY+ L+
Sbjct: 520 AALKLYHEM------------------LCQEEPKSQ--------------PDVVTYNILL 547
Query: 455 RGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNA---------------------LLLGLC 493
GLCM+ I A+++ M + PDV N L++ L
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLL 607
Query: 494 KSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDEL 533
K +R + + ++M+ K P +T+ ++V I ++
Sbjct: 608 KRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 256/543 (47%), Gaps = 35/543 (6%)
Query: 10 TLANPSPEPFRKAYGFYSQIPNLHSFSLNKGFIRVLASTQVTISPKDSVYTKPNRKPGNN 69
+ NP P + + P + SF L + + + DSV +R N
Sbjct: 50 VVENPLEAPISEK--MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLEN 107
Query: 70 NDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIK----VMEMMV 125
R +F+ + R K H PD +A +L + + + K+++K V+ +++
Sbjct: 108 RVIIER------SFIVVFRAYGKAHLPD--KAVDLFHRMVDEFRCKRSVKSFNSVLNVII 159
Query: 126 SSGIIPDA-SSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNL 184
+ G+ Y Y+VN N+ + N +++N +++ LC L +
Sbjct: 160 NEGLYHRGLEFYDYVVN-----SNMNMNIS-----------PNGLSFNLVIKALCKLRFV 203
Query: 185 NQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVL 244
+++++ + ++ +P+ +TY L++ KE + A+ LLD++ ++G P+ V YNVL
Sbjct: 204 DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263
Query: 245 LTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDR 304
+ GLCK+G + ++ KG PN V+YN L+ LC++G+ ++A LL M
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 305 SPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
P VTY LI L + A+++L M + + + Y+ +I+ L EGK + +
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383
Query: 365 CLDQMFHRRCKPNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
+M + CKPN Y+ L LC GK EA I+ + Y ++
Sbjct: 384 LWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
+ G +A Q+ EM K G + + + YS LI GLC G ++EA+ ++ M KPD
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMI---EKGQMPNETTYTILVEGIAHQDELELSAEVL 540
+++++ GLC D +L+++ M+ E P+ TY IL++G+ Q ++ + ++L
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 541 KEL 543
+
Sbjct: 564 NSM 566
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 198/423 (46%), Gaps = 25/423 (5%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D ++ ++++A L L+ M S+G P V L+ LCK + + K+++ M G +
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ +Y L++ LC KG + A+ L+E+M N VTY +L+ GL +++
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
L + ++G N YS L+ +KE AM L + KG KPN+V Y+VL+ GLC+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVT 310
EG+ EA + + G PN +Y+ L++ G EEA ++ EMD S
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 311 YNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMF 370
Y++LI L G+ A+ V +M+ +P +Y+ II LC G +D +K +M
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 371 HR---RCKPNEGTYN----GLAMLCGVGKVQEAF----------------AIIQSLGNKQ 407
+ + +P+ TYN GL M + + + + +L K
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 408 NSSPQ--EFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEE 465
NS + F + ++ L ++ + A ++ M P + T++ ++R +C I
Sbjct: 590 NSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINA 649
Query: 466 ALE 468
A++
Sbjct: 650 AID 652
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 259 RFFRDLPSKG-FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ F+ P G F+ + + ++ S G ++ +LL+ + +R I+ + ++
Sbjct: 62 KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENR--VIIERSFIVVF 119
Query: 318 LAYHGKT---DHALKVLDEMV-KGRFRPSAASYNPIIARLCSEG----KVDLVVKCLDQM 369
AY GK D A+ + MV + R + S S+N ++ + +EG ++ ++
Sbjct: 120 RAY-GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 370 FHRRCKPNEGTYN-GLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKT 428
+ PN ++N + LC + V A + + + ++ Y ++ LC++ +
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 429 YQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNAL 488
+A LL EM G +P Y+ LI GLC +G + ++ M P+ +N L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 489 LLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLR 546
+ GLC + D ++ + + M+ +PN+ TY L+ G+ Q + +L ++ R
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 41/246 (16%)
Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
T + +I S A G D K+L + R I + GK L K +D +
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRI---RLENRVIIERSFIVVFRAYGKAHLPDKAVD-L 134
Query: 370 FHR-----RCKPNEGTYNG-LAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLC 423
FHR RCK + ++N L ++ G EFY YV+ S
Sbjct: 135 FHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGL---------------EFYDYVVNS-- 177
Query: 424 RKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVD 483
+P+ +++ +I+ LC ++ A+E+F M E PD
Sbjct: 178 --------------NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223
Query: 484 NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKEL 543
+ L+ GLCK R D ++ + M +G P+ Y +L++G+ + +L +++ +
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 544 QLRQVV 549
L+ V
Sbjct: 284 FLKGCV 289
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 224/468 (47%), Gaps = 8/468 (1%)
Query: 96 PDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQL 155
P LL+ K K + + M+ +G P +Y +++C+CK+G+V A L
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 156 VEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYK 215
E+M+ G +TVTYNS++ G +G L+ ++ F + + P+ TY+ L+ K
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 216 ERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
+ ++ ++ G KPN+VSY+ L+ CKEG ++AI+F+ D+ G PN +
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
Y L+ + C G +A L EM +VTY LI L + A ++ +M
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 336 KGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQ 394
P+ ASYN +I +D ++ L+++ R KP+ Y LC + K++
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 395 EAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
A ++ + + Y ++ + + G + LL EM + T+ LI
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 455 RGLCMEGLIEEALEIF-VVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIEKGQ 513
GLC L+ +A++ F + ++ + + F A++ GLCK + + + +F+ M++KG
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 514 MPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQY 561
+P+ T YT L++G Q VL+ L LR ++E ++ ++ Y
Sbjct: 645 VPDRTAYTSLMDGNFKQ------GNVLEALALRDKMAEIGMKLDLLAY 686
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 215/498 (43%), Gaps = 48/498 (9%)
Query: 65 KPGNNNDTRHRDHKL---NDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVM 121
K + N HR KL +D + M+ G +P V ++ +CK ++ A +
Sbjct: 226 KTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF 285
Query: 122 EMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCML 181
E M G++PD +Y +++ K G + + E+M+D + +TYN+L+ C
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 345
Query: 182 GNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSY 241
G L L+F + GL PN +YS L++A KE + A+K D+ G PN +Y
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405
Query: 242 NVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDG 301
L+ CK G +A R ++ G E NVV+Y L+ LC R +EA EL +MD
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 302 GDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGR-FRPSAASYNPIIARLCSEGKVD 360
P + +YN LI D AL++L+E+ KGR +P Y I LCS K++
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 361 ------------------LVVKCLDQMFHRRCKPNEGTY--------------------- 381
L+ L + + P EG +
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 382 NGLAMLCGVGKVQEAF-AIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTK 440
+GL V K + F I G + N++ + +I LC+ + A L +M +
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAA---IFTAMIDGLCKDNQVEAATTLFEQMVQ 641
Query: 441 YGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDL 500
G PD Y+SL+ G +G + EAL + M E K D+ + +L+ GL +
Sbjct: 642 KGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQK 701
Query: 501 SLEVFQMMIEKGQMPNET 518
+ + MI +G P+E
Sbjct: 702 ARSFLEEMIGEGIHPDEV 719
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 179/385 (46%), Gaps = 6/385 (1%)
Query: 89 MVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGN 148
M G KP+VV + L+ CK M++AIK M G++P+ +YT L++ CK GN
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 149 VGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSF 208
+ A +L +M G N VTY +L+ GLC + ++ + ++ G++PN +Y+
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 209 LLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 268
L+ K + + A++LL+++ +G KP+L+ Y + GLC + E A ++ G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 269 FEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHAL 328
+ N + Y L+ + G E LL EM D T+VT+ +LI L + A+
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 329 KVLDEMVKG-RFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAML 387
+ + + +AA + +I LC + +V+ +QM + P+ Y L +
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL--M 655
Query: 388 CG---VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
G G V EA A+ + Y ++ L + +A L EM G
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Query: 445 PDSYTYSSLIRGLCMEGLIEEALEI 469
PD S+++ G I+EA+E+
Sbjct: 716 PDEVLCISVLKKHYELGCIDEAVEL 740
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 202/475 (42%), Gaps = 43/475 (9%)
Query: 130 IPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQ 189
+P + L + L G + A+Q KM+ + T + N L+ LG + +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 190 FLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLC 249
F +I G P FTY+ +++ KE V AA L +++ +G P+ V+YN ++ G
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
K GR ++ + FF ++ EP+V++YN L+ C G+ E EM G P +V
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQM 369
+Y+ L+ + G A+K +M + P+ +Y +I C G + + ++M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 370 FHRRCKPNEGTYNGLA-MLCGVGKVQEA---FAIIQSLGNKQNSSPQEFYKYVITSLCRK 425
+ N TY L LC +++EA F + + G N + Y +I +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS---YNALIHGFVKA 485
Query: 426 GKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIE--------------------- 464
+A +LL E+ G PD Y + I GLC IE
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 465 --------------EALEIFVVMEEYDYKPDVDNFNALLLGLCKSRRTDLSLEVFQMMIE 510
E L + M+E D + V F L+ GLCK++ +++ F +
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 511 K-GQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAVERLVMQYDFE 564
G N +T +++G+ +++E + + +++ + +V + +M +F+
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 153/355 (43%), Gaps = 49/355 (13%)
Query: 49 QVTISPKDSVYTK---PNRKPGNNNDTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLL 105
+V + P + YT N K GN L+DAF M+ G + +VV T L+
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGN----------LSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 106 YDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYP 165
LC A +MK+A ++ M ++G+IP+ +SY L++ K N+ A++L+ +++ G
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504
Query: 166 TNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
+ + Y + + GLC L + + ++ + + G+ N+ Y+ L++A +K + L
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 226 LDD------------------------IIAK------------GGKPNLVSYNVLLTGLC 249
LD+ +++K G + N + ++ GLC
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 250 KEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIV 309
K+ + E A F + KG P+ +Y L+ +G EA L +M ++
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 684
Query: 310 TYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVK 364
Y L+ L++ + A L+EM+ P ++ + G +D V+
Sbjct: 685 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 146/379 (38%), Gaps = 87/379 (22%)
Query: 257 AIRFFR-DLPSKGFEPNVVSYNIL-----------------------------------L 280
A +FF+ + GF+ +V SY I+
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWST 184
Query: 281 RSLCME---------------GRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTD 325
R++C+ G EEA + ++M P + N L+ A GKTD
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 326 HALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLA 385
+ +M+ RP+ +YN +I +C EG V+ ++M R P+ TYN +
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 386 MLCG-VGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLYEMTKYGFT 444
G VG++ + + + + Y +I C+ GK + EM G
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 445 PDSYTYSSLIRGLCMEGLIEEALEIFVVME-------EYDYKPDVD-------------- 483
P+ +YS+L+ C EG++++A++ +V M EY Y +D
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 484 --------------NFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAH 529
+ AL+ GLC + R + E+F M G +PN +Y L+ G
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 530 QDELELSAEVLKELQLRQV 548
++ + E+L EL+ R +
Sbjct: 485 AKNMDRALELLNELKGRGI 503
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 430 QAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALL 489
F +L+ T+ P + +L L G++EEA++ F M+ + P + N LL
Sbjct: 176 DVFDVLWS-TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLL 234
Query: 490 LGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVV 549
K +TD F+ MI G P TY I+++ + + ++E + + +E++ R +V
Sbjct: 235 HRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV 294
Query: 550 SESA 553
++
Sbjct: 295 PDTV 298
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 35/155 (22%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D +D+++ A E+MV KG ++
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKG-----------------------------------LV 645
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
PD ++YT L++ K+GNV A+ L +KM + G + + Y SLV GL L ++ F
Sbjct: 646 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 705
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKL 225
L+ +I +G+ P+ +L+ Y+ + A++L
Sbjct: 706 LEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 211/440 (47%), Gaps = 2/440 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
K NDA M P +V + LL + K NK + I + + GI D S+T
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L++C C+ + A+ + KM G+ + VT+ SLV G C + +++ +D+++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G PN Y+ ++++ ++ V+ A+ +L + G +P++V+YN L+T L G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
R D+ G P+V++++ L+ EG+ EA + EM +P IVTYN LI
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
L HG D A KVL+ +V F P+A +YN +I C +VD +K L M +
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
TYN L C GK A ++ + + + ++ LC GK +A L
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLE 418
Query: 437 EMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCKSR 496
++ K TY+ +I+GLC +E+A +F + PDV + +++GL + R
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKR 478
Query: 497 RTDLSLEVF-QMMIEKGQMP 515
+ E++ +M E G MP
Sbjct: 479 LWREAHELYRKMQKEDGLMP 498
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 1/367 (0%)
Query: 184 LNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNV 243
N +L + + +P+ +S LL A K A + L + G +L S+
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 244 LLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
L+ C+ R A+ + GFEP++V++ L+ C R+ EA L+ ++ G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 304 RSPTIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVV 363
P +V YN +I SL G+ + AL VL M K RP +YN +I RL G +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 364 KCLDQMFHRRCKPNEGTYNGLAMLCGV-GKVQEAFAIIQSLGNKQNSSPQEFYKYVITSL 422
+ L M P+ T++ L + G G++ EA + + + Y +I L
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 423 CRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDV 482
C G +A ++L + GF P++ TY++LI G C +++ ++I VM D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 483 DNFNALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKE 542
+N L G C++ + + +V M+ G P+ T+ IL++G+ ++ + L++
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 543 LQLRQVV 549
LQ + V
Sbjct: 420 LQKSKTV 426
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 155/325 (47%), Gaps = 35/325 (10%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D R +L+ A L +M+ G +P +V +L+ C N+ +A+ +++ +V G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ Y +++ LC+KG V A+ +++ M+ G + VTYNSL+ L G S +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKE---------------RGVHA-------------- 221
L +++ G+ P+ T+S L++ KE R V+
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 222 ------AMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVS 275
A K+L+ +++KG PN V+YN L+ G CK R ++ ++ + G + + +
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 276 YNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMV 335
YN L + C G++ A ++L M P + T+NIL+ L HGK AL L+++
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421
Query: 336 KGRFRPSAASYNPIIARLCSEGKVD 360
K + +YN II LC KV+
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVE 446
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 123/233 (52%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
D ++ +L +A Q M+ + P++V +L+ LC + +A KV+ ++VS G
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+A +Y L+N CK V M+++ M G +T TYN+L +G C G + + +
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381
Query: 191 LDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 250
L R++ G+ P+ +T++ LL+ + A+ L+D+ +++YN+++ GLCK
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Query: 251 EGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGD 303
+ E+A F L KG P+V++Y ++ L + W EA+EL +M D
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 192/399 (48%), Gaps = 34/399 (8%)
Query: 127 SGIIPDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQ 186
S ++ D S+ L+ C+ G + + L+ ++ ++G+ N V Y +L+ G C G + +
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 187 SLQFLDRLIQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLT 246
+ + + GLV N TY+ L+ +K ++ + + G PNL +YN ++
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 247 GLCKEGRTEEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSP 306
LCK+GRT++A + F ++ +G N+V+YN L+ LC E + EAN+++ +M +P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 307 TIVTYNILIGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCL 366
++TYN LI GK AL + ++ PS +YN +++ C +G K +
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 367 DQMFHRRCKPNEGTYNGLAMLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKG 426
+M R KP++ TY L I + R
Sbjct: 397 KEMEERGIKPSKVTYTIL----------------------------------IDTFARSD 422
Query: 427 KTYQAFQLLYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFN 486
+A QL M + G PD +TYS LI G C++G + EA +F M E + +P+ +N
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 487 ALLLGLCKSRRTDLSLEVFQMMIEKGQMPNETTYTILVE 525
++LG CK + +L++ + M EK PN +Y ++E
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 196/380 (51%), Gaps = 1/380 (0%)
Query: 78 KLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYT 137
++ +F L + G P+VV T L+ CK +++KA + M G++ + +YT
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 138 YLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQK 197
L+N L K G ++ EKM++ G N TYN ++ LC G + Q D + ++
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 198 GLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 257
G+ N TY+ L+ +E ++ A K++D + + G PNL++YN L+ G C G+ +A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 258 IRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGS 317
+ RDL S+G P++V+YNIL+ C +G A +++ EM+ P+ VTY ILI +
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 318 LAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPN 377
A + A+++ M + P +Y+ +I C +G+++ + M + C+PN
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 378 EGTYNGLAM-LCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQLLY 436
E YN + + C G A +++ + K+ + Y+Y+I LC++ K+ +A +L+
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537
Query: 437 EMTKYGFTPDSYTYSSLIRG 456
+M G P + S + R
Sbjct: 538 KMIDSGIDPSTSILSLISRA 557
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 209/426 (49%), Gaps = 2/426 (0%)
Query: 136 YTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLI 195
Y ++N + ++ ++ +M D G+ + +N L+ + + NQ F +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 196 QKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTE 255
K +V + +++ L++ + + + LL ++ G PN+V Y L+ G CK+G E
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 256 EAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILI 315
+A F ++ G N +Y +L+ L G ++ E+ +M P + TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 316 GSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCK 375
L G+T A +V DEM + + +YN +I LC E K++ K +DQM
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 376 PNEGTYNGLA-MLCGVGKVQEAFAIIQSLGNKQNSSPQEFYKYVITSLCRKGKTYQAFQL 434
PN TYN L CGVGK+ +A ++ + L ++ S Y +++ CRKG T A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 435 LYEMTKYGFTPDSYTYSSLIRGLCMEGLIEEALEIFVVMEEYDYKPDVDNFNALLLGLCK 494
+ EM + G P TY+ LI +E+A+++ + MEE PDV ++ L+ G C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 495 SRRTDLSLEVFQMMIEKGQMPNETTYTILVEGIAHQDELELSAEVLKELQLRQVVSESAV 554
+ + + +F+ M+EK PNE Y ++ G + + ++LKE++ +++ A
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 555 ERLVMQ 560
R +++
Sbjct: 516 YRYMIE 521
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 185/372 (49%), Gaps = 3/372 (0%)
Query: 97 DVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDASSYTYLVNCLCKKGNVGYAMQLV 156
DV L+ C+A +++K+ ++ + G P+ YT L++ CKKG + A L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 157 EKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRLIQKGLVPNAFTYSFLLEAAYKE 216
+M G N TY L+ GL G Q + +++ + G+ PN +TY+ ++ K+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 217 RGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFEPNVVSY 276
A ++ D++ +G N+V+YN L+ GLC+E + EA + + S G PN+++Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 277 NILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNILIGSLAYHGKTDHALKVLDEMVK 336
N L+ C G+ +A L ++ SP++VTYNIL+ G T A K++ EM +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 337 GRFRPSAASYNPIIARLCSEGKVDLVVKCLDQMFHRRCKPNEGTYNGLAM-LCGVGKVQE 395
+PS +Y +I ++ ++ M P+ TY+ L C G++ E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 396 AFAIIQSLGNKQNSSPQE-FYKYVITSLCRKGKTYQAFQLLYEMTKYGFTPDSYTYSSLI 454
A + +S+ K N P E Y +I C++G +Y+A +LL EM + P+ +Y +I
Sbjct: 462 ASRLFKSMVEK-NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 455 RGLCMEGLIEEA 466
LC E +EA
Sbjct: 521 EVLCKERKSKEA 532
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 149/286 (52%), Gaps = 5/286 (1%)
Query: 75 RDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGIIPDAS 134
+D + DAF + M +G ++V L+ LC+ K+ +A KV++ M S GI P+
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 135 SYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQFLDRL 194
+Y L++ C G +G A+ L ++ G + VTYN LV G C G+ + + + + +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 195 IQKGLVPNAFTYSFLLEAAYKERGVHAAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 254
++G+ P+ TY+ L++ + + A++L + G P++ +Y+VL+ G C +G+
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 255 EEAIRFFRDLPSKGFEPNVVSYNILLRSLCMEGRWEEANELLAEMDGGDRSPTIVTYNIL 314
EA R F+ + K EPN V YN ++ C EG A +LL EM+ + +P + +Y +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 315 IGSLAYHGKTDHALKVLDEMVKGRFRPSAASYNPIIARLCSEGKVD 360
I L K+ A +++++M+ PS + I L S K D
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPSTS-----ILSLISRAKND 560
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%)
Query: 71 DTRHRDHKLNDAFLQLERMVSKGHKPDVVQATNLLYDLCKANKMKKAIKVMEMMVSSGII 130
DT R + A M G PDV + L++ C +M +A ++ + MV
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 131 PDASSYTYLVNCLCKKGNVGYAMQLVEKMEDYGYPTNTVTYNSLVRGLCMLGNLNQSLQF 190
P+ Y ++ CK+G+ A++L+++ME+ N +Y ++ LC ++ +
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 191 LDRLIQKGLVPNAFTYSFLLEA 212
++++I G+ P+ S + A
Sbjct: 536 VEKMIDSGIDPSTSILSLISRA 557
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 208,937,763
Number of Sequences: 539616
Number of extensions: 8904210
Number of successful extensions: 34147
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 22521
Number of HSP's gapped (non-prelim): 3386
length of query: 568
length of database: 191,569,459
effective HSP length: 123
effective length of query: 445
effective length of database: 125,196,691
effective search space: 55712527495
effective search space used: 55712527495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)