Query 041464
Match_columns 198
No_of_seqs 137 out of 179
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 12:15:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041464.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041464hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cqb_A Probable protease HTPX 94.3 0.042 1.4E-06 40.7 4.1 35 83-121 54-93 (107)
2 3c37_A Peptidase, M48 family; 92.5 0.18 6.1E-06 42.4 5.5 35 84-121 75-110 (253)
3 4aw6_A CAAX prenyl protease 1 72.0 1.8 6.3E-05 40.1 2.5 14 108-121 326-339 (482)
4 1eb6_A Neutral protease II; me 65.5 3.5 0.00012 32.9 2.6 42 84-125 90-136 (177)
5 1g12_A Peptidyl-Lys metalloend 61.4 8.2 0.00028 30.4 4.0 80 37-125 37-125 (167)
6 1lml_A Leishmanolysin; metallo 58.0 18 0.0006 33.3 6.2 27 91-121 143-169 (478)
7 3fxd_A Protein ICMQ; helix bun 51.7 7.6 0.00026 26.2 1.9 39 159-197 12-51 (57)
8 1cge_A Fibroblast collagenase; 37.3 25 0.00084 27.3 3.2 32 90-125 92-126 (168)
9 3e11_A Predicted zincin-like m 34.1 20 0.00068 26.8 2.1 35 91-125 68-105 (114)
10 1ef4_A Subunit N, DNA-directed 31.0 23 0.0008 23.6 1.8 16 181-196 9-24 (55)
11 2ejq_A Hypothetical protein TT 28.9 27 0.00092 26.8 2.1 32 90-121 66-99 (130)
12 2ovx_A Matrix metalloproteinas 28.7 26 0.00087 27.0 1.9 33 89-125 90-126 (159)
13 4fgm_A Aminopeptidase N family 27.5 67 0.0023 30.1 4.9 54 68-121 219-277 (597)
14 2xs4_A Karilysin protease; hyd 27.2 42 0.0014 25.7 3.0 33 89-125 95-130 (167)
15 2jsd_A Matrix metalloproteinas 23.7 31 0.001 26.2 1.5 32 90-125 89-123 (160)
16 1u4g_A Elastase, pseudolysin; 23.3 28 0.00097 30.3 1.4 10 112-121 135-144 (301)
17 1bqb_A Protein (aureolysin); h 22.9 29 0.00099 30.2 1.4 10 112-121 139-148 (301)
18 4ger_A Gentlyase metalloprotea 22.8 34 0.0012 29.9 1.8 10 112-121 130-139 (304)
19 3edh_A Bone morphogenetic prot 22.6 31 0.001 28.0 1.4 10 112-121 88-97 (201)
20 4fke_A Aminopeptidase N; zinc 22.4 40 0.0014 33.0 2.4 31 91-121 293-326 (909)
21 3k6c_A Uncharacterized protein 22.3 36 0.0012 25.0 1.6 23 144-166 62-84 (95)
22 3lqb_A Hatching enzyme, LOC792 22.3 31 0.0011 28.0 1.4 10 112-121 94-103 (199)
23 1rm8_A MMP-16, matrix metallop 22.3 40 0.0014 26.0 2.0 35 90-125 95-132 (169)
24 1hv5_A Stromelysin 3; inhibiti 21.9 36 0.0012 26.2 1.6 34 90-127 93-130 (165)
25 2y6d_A Matrilysin; hydrolase; 21.7 41 0.0014 26.3 2.0 33 90-125 95-130 (174)
26 1zpy_A Hypothetical protein NE 21.4 39 0.0013 24.8 1.6 23 144-166 62-84 (95)
27 2gtq_A Aminopeptidase N; alani 20.2 1.3E+02 0.0044 29.5 5.5 63 52-121 231-297 (867)
28 2wx4_A DCP1, decapping protein 20.2 67 0.0023 20.7 2.3 24 150-173 18-41 (46)
29 3nqx_A MCP-02, secreted metall 20.2 36 0.0012 29.8 1.4 10 112-121 136-145 (306)
No 1
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.30 E-value=0.042 Score=40.73 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=29.0
Q ss_pred ceeEecCC-----eEEEcccccccCCchhhhHHHHHHHHHHHhh
Q 041464 83 EIAFTSNN-----GIHYGDDFIQNIPVDLIKQEFSGVMYHEMTH 121 (198)
Q Consensus 83 GVA~t~g~-----~I~~S~~~i~~~~~d~~~~Ei~GVl~HE~vH 121 (198)
--|++.|. .|.++...+...+. +|+.+||.||+.|
T Consensus 54 ~NAf~~g~~~~~~~i~v~~gLl~~l~~----~El~aVlaHElgH 93 (107)
T 3cqb_A 54 INAFATGAKRDDSLVAVSTGLLHNMTR----DEAEAVLAHEVSH 93 (107)
T ss_dssp EEEEEECCC--CCEEEEEHHHHHHSCH----HHHHHHHHHHHHH
T ss_pred cCEEEEecCCCCCEEEEcHHHHhhCCH----HHHHHHHHHHHHH
Confidence 36888873 59999999988753 5999999999999
No 2
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=92.48 E-value=0.18 Score=42.41 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=28.7
Q ss_pred eeEec-CCeEEEcccccccCCchhhhHHHHHHHHHHHhh
Q 041464 84 IAFTS-NNGIHYGDDFIQNIPVDLIKQEFSGVMYHEMTH 121 (198)
Q Consensus 84 VA~t~-g~~I~~S~~~i~~~~~d~~~~Ei~GVl~HE~vH 121 (198)
-||+. |+.|.++...|+...+ .+|+.+||.||+.|
T Consensus 75 NAfa~~gg~I~v~~gLl~~l~~---~~ELaaVLaHElgH 110 (253)
T 3c37_A 75 NAFAIPGGRVYVHTGLLKAADN---ETELAGVLAHEINH 110 (253)
T ss_dssp CEEEETTTEEEEEHHHHHHCSS---HHHHHHHHHHHHHH
T ss_pred CeeEcCCCeEEeeHHHHhhCCC---HHHHHHHHHHHHHH
Confidence 46666 4699999999988632 36999999999999
No 3
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=72.00 E-value=1.8 Score=40.11 Aligned_cols=14 Identities=36% Similarity=0.574 Sum_probs=13.4
Q ss_pred hHHHHHHHHHHHhh
Q 041464 108 KQEFSGVMYHEMTH 121 (198)
Q Consensus 108 ~~Ei~GVl~HE~vH 121 (198)
++||.+||.||+.|
T Consensus 326 ~~El~aVlaHElgH 339 (482)
T 4aw6_A 326 NEEVLAVLGHELGH 339 (482)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 58999999999999
No 4
>1eb6_A Neutral protease II; metalloproteinase, zinc, hydrolase; 1.0A {Aspergillus oryzae} SCOP: d.92.1.12
Probab=65.50 E-value=3.5 Score=32.90 Aligned_cols=42 Identities=29% Similarity=0.352 Sum_probs=27.5
Q ss_pred eeEecCC--eEEEcccccccCC---chhhhHHHHHHHHHHHhhcCCC
Q 041464 84 IAFTSNN--GIHYGDDFIQNIP---VDLIKQEFSGVMYHEMTHANYV 125 (198)
Q Consensus 84 VA~t~g~--~I~~S~~~i~~~~---~d~~~~Ei~GVl~HE~vHAg~a 125 (198)
+|||.+. +|.+-+.|....| ...-..--.+.|.|||+|...+
T Consensus 90 ~Ayt~~~~~~i~~Cp~ff~~~~~~~~~c~~~~~a~tllHE~tH~~~v 136 (177)
T 1eb6_A 90 LAYTLPSKNEIANCDIYYSELPPLAQKCHAQDQATTTLHEFTHAPGV 136 (177)
T ss_dssp CEEEEGGGTEEEECHHHHHHCCSSCCSTTCCCHHHHHHHHHHTCTTT
T ss_pred eEEEecCCCeEEECchHHhcCCcccccccCCcHHHHHHHHHHhhhhh
Confidence 7888864 7999998876422 1000112579999999996533
No 5
>1g12_A Peptidyl-Lys metalloendopeptidase; zinc cordinate,metalloprotease, hydrolase; HET: MAN; 1.60A {Grifola frondosa} SCOP: d.92.1.12 PDB: 1ge5_A* 1ge6_A* 1ge7_A*
Probab=61.36 E-value=8.2 Score=30.44 Aligned_cols=80 Identities=11% Similarity=0.152 Sum_probs=43.1
Q ss_pred ccchhhhccCCCch--hHHHHHHhccCCCCCCCCCCeEEEEEccCCCCc-eeEecCC---eEEEcccccccC---Cchhh
Q 041464 37 GGMRFANEIGAEYT--PNFIWRLFQQNTEADRKNIPQVDLFIDDMKPGE-IAFTSNN---GIHYGDDFIQNI---PVDLI 107 (198)
Q Consensus 37 gg~rF~~~i~~~~a--~~~i~~lf~y~~p~~rk~v~~Vtl~l~d~~~~G-VA~t~g~---~I~~S~~~i~~~---~~d~~ 107 (198)
++.+|..-+|.... ++-|...|.--... .-..+++.-.- ..+| +||+.++ +|.+.+.+...- .++
T Consensus 37 ~s~~~~~~Fg~~~~~~~~~V~~~f~~i~~~---~~~~~~~~C~C-~~~~~~Ay~~p~~~~~i~~Cp~f~~~p~~~~~s-- 110 (167)
T 1g12_A 37 ATPRYTTWFGSYISSRHSTVLQHYTDMNSN---DFSSYSFDCTC-TAAGTFAYVYPNRFGTVYLCGAFWKAPTTGTDS-- 110 (167)
T ss_dssp CCHHHHHHHCSCCHHHHHHHHHHHHHHHTS---CGGGCEEECCC-CCSSCCEECCTTSTTEEEECGGGGGSCSSSTTC--
T ss_pred CcHHHHHHhCCCCHHHHHHHHHHHHHHHhc---cCCceeEeecc-CCCCcEEEEeCCCCCeEEECCchhcCCCCCCCC--
Confidence 45688877774432 22222232111111 11233433332 2235 7888764 599999888631 123
Q ss_pred hHHHHHHHHHHHhhcCCC
Q 041464 108 KQEFSGVMYHEMTHANYV 125 (198)
Q Consensus 108 ~~Ei~GVl~HE~vHAg~a 125 (198)
-.+.|.|||+|...+
T Consensus 111 ---~a~tllHE~tH~~~v 125 (167)
T 1g12_A 111 ---QAGTLVHESSHFTRN 125 (167)
T ss_dssp ---HHHHHHHHHHHSGGG
T ss_pred ---chhhHHHhhhccccC
Confidence 279999999996544
No 6
>1lml_A Leishmanolysin; metalloprotease, glycoprotein; 1.86A {Leishmania major} SCOP: d.92.1.3
Probab=58.04 E-value=18 Score=33.30 Aligned_cols=27 Identities=30% Similarity=0.245 Sum_probs=21.8
Q ss_pred eEEEcccccccCCchhhhHHHHHHHHHHHhh
Q 041464 91 GIHYGDDFIQNIPVDLIKQEFSGVMYHEMTH 121 (198)
Q Consensus 91 ~I~~S~~~i~~~~~d~~~~Ei~GVl~HE~vH 121 (198)
.|.|++++|.... ..+...++.|||.|
T Consensus 143 ~i~~~p~~i~~~~----~~~~~~~~~HEi~H 169 (478)
T 1lml_A 143 VINIPAANIASRY----DQLVTRVVTHEMAH 169 (478)
T ss_dssp EEECCGGGCCCSC----CHHHHHHHHHHHHH
T ss_pred EEeeCHHHCCccc----chHHHHHHHHHHHH
Confidence 8999999997532 24578999999999
No 7
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=51.74 E-value=7.6 Score=26.21 Aligned_cols=39 Identities=18% Similarity=0.527 Sum_probs=34.3
Q ss_pred CHHHHHHHHHhcc-CCHHHHHHHhCCCHHHHHHHHHHHhC
Q 041464 159 GFVAELNKKMRDG-YNDNFFMELLGKSIDQLWNDYKAKYG 197 (198)
Q Consensus 159 gfV~~LN~~mr~~-ysd~~~~~l~G~~v~~LW~eY~~~~~ 197 (198)
..+.-||+++..| |.++-|-..-||.+.++=+.|...+|
T Consensus 12 aILkaLdeaIe~GPWe~SNFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 12 TILKALNDAIEKGPWDKSNFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp HHHHHHHHHHHHSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 3667899999999 99999999999999999988887764
No 8
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=37.34 E-value=25 Score=27.28 Aligned_cols=32 Identities=22% Similarity=0.418 Sum_probs=21.0
Q ss_pred CeEEEccc--ccccCCchhhhHHHHHHHHHHHhh-cCCC
Q 041464 90 NGIHYGDD--FIQNIPVDLIKQEFSGVMYHEMTH-ANYV 125 (198)
Q Consensus 90 ~~I~~S~~--~i~~~~~d~~~~Ei~GVl~HE~vH-Ag~a 125 (198)
+.|||+.+ |.....+ ..+.+|+.||+-| -|+.
T Consensus 92 g~~~~d~~~~w~~~~~g----~~~~~v~~HEiGHaLGL~ 126 (168)
T 1cge_A 92 GDAHFDEDERWTNNFRE----YNLHRVAAHELGHSLGLS 126 (168)
T ss_dssp TCEEEETTSCCBSSSSS----CBHHHHHHHHHHHHTTCC
T ss_pred ceEEEccccccccCCCC----cchhhhhhhHhHhhhcCC
Confidence 47898864 4332222 1268999999999 4664
No 9
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=34.13 E-value=20 Score=26.84 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=23.2
Q ss_pred eEEEcccccccC--CchhhhHHHHHHHHHHHhh-cCCC
Q 041464 91 GIHYGDDFIQNI--PVDLIKQEFSGVMYHEMTH-ANYV 125 (198)
Q Consensus 91 ~I~~S~~~i~~~--~~d~~~~Ei~GVl~HE~vH-Ag~a 125 (198)
.|.+=-+=|... +.+.+..+|.-||.||+.| -|+.
T Consensus 68 rI~lYR~Pi~~~~~~~~el~~~V~~vvvhEiahh~G~~ 105 (114)
T 3e11_A 68 RIIIYRNTICALCETESEVIDEVRKTVVHEIAHHFGID 105 (114)
T ss_dssp EEEEEHHHHHHTCSSHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEEehHHHHHHhCChhHHHHHHHHHHHHHHHHHcCCC
Confidence 555544444432 2345999999999999999 4443
No 10
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=31.05 E-value=23 Score=23.60 Aligned_cols=16 Identities=25% Similarity=0.677 Sum_probs=13.9
Q ss_pred hCCCHHHHHHHHHHHh
Q 041464 181 LGKSIDQLWNDYKAKY 196 (198)
Q Consensus 181 ~G~~v~~LW~eY~~~~ 196 (198)
+|+.+-++|++|++.+
T Consensus 9 CGkvi~~~we~y~~~~ 24 (55)
T 1ef4_A 9 CGKPVSAYFNEYQRRV 24 (55)
T ss_dssp TTSCCHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHH
Confidence 6999999999999754
No 11
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=28.92 E-value=27 Score=26.78 Aligned_cols=32 Identities=19% Similarity=0.054 Sum_probs=22.0
Q ss_pred CeEEEcccccccC--CchhhhHHHHHHHHHHHhh
Q 041464 90 NGIHYGDDFIQNI--PVDLIKQEFSGVMYHEMTH 121 (198)
Q Consensus 90 ~~I~~S~~~i~~~--~~d~~~~Ei~GVl~HE~vH 121 (198)
+.|.+=-+=|... +.+.+..+|.-+|.||+.|
T Consensus 66 ~~I~lYR~pi~~~~~~~eeL~~~V~~tvvHEiaH 99 (130)
T 2ejq_A 66 RHIALYYGSFLEVAGEGFDWEAEVWETMLHELRH 99 (130)
T ss_dssp CEEEEEHHHHHHHCCTTCCHHHHHHHHHHHHHHH
T ss_pred CEEEEehHHHHHHhCChhhHHHHHHHHHHHHhHH
Confidence 3565544444332 2334999999999999999
No 12
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=28.74 E-value=26 Score=27.00 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=21.6
Q ss_pred CCeEEEccc--ccccC-CchhhhHHHHHHHHHHHhh-cCCC
Q 041464 89 NNGIHYGDD--FIQNI-PVDLIKQEFSGVMYHEMTH-ANYV 125 (198)
Q Consensus 89 g~~I~~S~~--~i~~~-~~d~~~~Ei~GVl~HE~vH-Ag~a 125 (198)
++.|||+.+ |.... ++ ..+.+|+.||+-| -|+.
T Consensus 90 ~g~~~fd~~e~w~~~~~~g----~~~~~va~HEiGHaLGL~ 126 (159)
T 2ovx_A 90 QGDAHFDDDELWSLGKGQG----YSLFLVAAHQFGHALGLD 126 (159)
T ss_dssp TTCEEEETTSCEECSSSSS----EEHHHHHHHHHHHHTTCC
T ss_pred cceEEEccccceecCCCcc----cchhhhhhhhhhhhhcCC
Confidence 358999765 33221 22 1367999999999 4764
No 13
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=27.51 E-value=67 Score=30.11 Aligned_cols=54 Identities=11% Similarity=0.090 Sum_probs=30.2
Q ss_pred CCCeEEEEEc--cCCCCceeEecCCeEEEcccccccC--C-chhhhHHHHHHHHHHHhh
Q 041464 68 NIPQVDLFID--DMKPGEIAFTSNNGIHYGDDFIQNI--P-VDLIKQEFSGVMYHEMTH 121 (198)
Q Consensus 68 ~v~~Vtl~l~--d~~~~GVA~t~g~~I~~S~~~i~~~--~-~d~~~~Ei~GVl~HE~vH 121 (198)
|..+-.+++. +..+.|........|.++..-+-.. . .+.-...+.+++.||+.|
T Consensus 219 P~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~liaHE~~H 277 (597)
T 4fgm_A 219 PFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLSLCCHEYFH 277 (597)
T ss_dssp SCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhhhHhhhhhe
Confidence 4566666553 2222556555444677776644211 1 111234578999999999
No 14
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=27.19 E-value=42 Score=25.73 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=21.8
Q ss_pred CCeEEEccc--ccccCCchhhhHHHHHHHHHHHhh-cCCC
Q 041464 89 NNGIHYGDD--FIQNIPVDLIKQEFSGVMYHEMTH-ANYV 125 (198)
Q Consensus 89 g~~I~~S~~--~i~~~~~d~~~~Ei~GVl~HE~vH-Ag~a 125 (198)
++.|||+.+ |.....+ ..+.+|+.||+-| -|+.
T Consensus 95 ~g~~~fd~~e~w~~~~~g----~~~~~v~~HEiGHaLGL~ 130 (167)
T 2xs4_A 95 AGHLHFDDDENWSINGSG----IDLITVAAHEIGHLLGIE 130 (167)
T ss_dssp TTEEEEETTSCEESSSSS----EEHHHHHHHHHHHHHTBC
T ss_pred cceEEECCccccccCCCc----cchhhhHHHHHHHhhcCC
Confidence 458999875 3322122 1367999999999 4764
No 15
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=23.74 E-value=31 Score=26.18 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=20.4
Q ss_pred CeEEEccc--ccccCCchhhhHHHHHHHHHHHhh-cCCC
Q 041464 90 NGIHYGDD--FIQNIPVDLIKQEFSGVMYHEMTH-ANYV 125 (198)
Q Consensus 90 ~~I~~S~~--~i~~~~~d~~~~Ei~GVl~HE~vH-Ag~a 125 (198)
+.|||+.+ |....++ ..+.+|+.||+-| -|+.
T Consensus 89 g~~~~d~~~~~~~~~~g----~~~~~v~~HEiGHaLGL~ 123 (160)
T 2jsd_A 89 GDTHFDNAEKWTMGTNG----FNLFTVAAHEFGHALGLA 123 (160)
T ss_dssp TCEEEETTSCEESSSSS----EEHHHHHHHHHHHHHTCC
T ss_pred ccEEeccccccccCCcc----hhhHHHHHHHhHhhhcCC
Confidence 47888764 2222222 1367999999999 3664
No 16
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=23.34 E-value=28 Score=30.31 Aligned_cols=10 Identities=40% Similarity=0.574 Sum_probs=9.4
Q ss_pred HHHHHHHHhh
Q 041464 112 SGVMYHEMTH 121 (198)
Q Consensus 112 ~GVl~HE~vH 121 (198)
.+|+.|||+|
T Consensus 135 lDVv~HE~tH 144 (301)
T 1u4g_A 135 LDVAAHEVSH 144 (301)
T ss_dssp HHHHHHHHHH
T ss_pred cceeeecccc
Confidence 5999999999
No 17
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=22.95 E-value=29 Score=30.23 Aligned_cols=10 Identities=50% Similarity=0.813 Sum_probs=9.3
Q ss_pred HHHHHHHHhh
Q 041464 112 SGVMYHEMTH 121 (198)
Q Consensus 112 ~GVl~HE~vH 121 (198)
.+|+.|||+|
T Consensus 139 lDVv~HE~tH 148 (301)
T 1bqb_A 139 NDVVAHEITH 148 (301)
T ss_dssp HHHHHHHHHH
T ss_pred cceeeeeccc
Confidence 4999999999
No 18
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=22.80 E-value=34 Score=29.91 Aligned_cols=10 Identities=50% Similarity=0.747 Sum_probs=9.3
Q ss_pred HHHHHHHHhh
Q 041464 112 SGVMYHEMTH 121 (198)
Q Consensus 112 ~GVl~HE~vH 121 (198)
..|+.|||+|
T Consensus 130 lDVvaHEltH 139 (304)
T 4ger_A 130 PDVVGHELTH 139 (304)
T ss_dssp HHHHHHHHHH
T ss_pred cchhhhcccc
Confidence 5999999999
No 19
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=22.59 E-value=31 Score=27.95 Aligned_cols=10 Identities=40% Similarity=0.823 Sum_probs=9.5
Q ss_pred HHHHHHHHhh
Q 041464 112 SGVMYHEMTH 121 (198)
Q Consensus 112 ~GVl~HE~vH 121 (198)
.|++.||+.|
T Consensus 88 ~g~i~HEl~H 97 (201)
T 3edh_A 88 FGIVVHELGH 97 (201)
T ss_dssp HHHHHHHHHH
T ss_pred cchhHHHHHH
Confidence 5999999999
No 20
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=22.45 E-value=40 Score=33.03 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=22.1
Q ss_pred eEEEcccccc---cCCchhhhHHHHHHHHHHHhh
Q 041464 91 GIHYGDDFIQ---NIPVDLIKQEFSGVMYHEMTH 121 (198)
Q Consensus 91 ~I~~S~~~i~---~~~~d~~~~Ei~GVl~HE~vH 121 (198)
-|.+...++- +.+...-+..+..|+.||++|
T Consensus 293 lit~~e~~ll~d~~~s~~~~~~~~~~viaHElAH 326 (909)
T 4fke_A 293 LVTYRENALLFDPQSSSISNKERVVTVIAHELAH 326 (909)
T ss_dssp EEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred ccccccceeecCcccCChHHHHHHHHHHHHHHHh
Confidence 6777766652 223334677889999999999
No 21
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=22.34 E-value=36 Score=25.04 Aligned_cols=23 Identities=26% Similarity=0.340 Sum_probs=19.8
Q ss_pred hhHhHHHHHHhhcCCCHHHHHHH
Q 041464 144 SVAARFLDYCNDLRNGFVAELNK 166 (198)
Q Consensus 144 ~~TA~FL~wle~~~~gfV~~LN~ 166 (198)
.+.|-||.||.+++|++...|-.
T Consensus 62 eH~g~~lelLrr~Dp~~~~~l~~ 84 (95)
T 3k6c_A 62 EHAAMLLEWIRRCDPAFDKELKD 84 (95)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHH
Confidence 68999999999999988877644
No 22
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=22.32 E-value=31 Score=28.01 Aligned_cols=10 Identities=50% Similarity=0.946 Sum_probs=9.5
Q ss_pred HHHHHHHHhh
Q 041464 112 SGVMYHEMTH 121 (198)
Q Consensus 112 ~GVl~HE~vH 121 (198)
.|++.||+.|
T Consensus 94 ~g~i~HEl~H 103 (199)
T 3lqb_A 94 SGIAQHELNH 103 (199)
T ss_dssp HHHHHHHHHH
T ss_pred cchHHHHHHH
Confidence 6999999999
No 23
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=22.28 E-value=40 Score=25.98 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=21.4
Q ss_pred CeEEEccc--ccccCCchhhhHHHHHHHHHHHhh-cCCC
Q 041464 90 NGIHYGDD--FIQNIPVDLIKQEFSGVMYHEMTH-ANYV 125 (198)
Q Consensus 90 ~~I~~S~~--~i~~~~~d~~~~Ei~GVl~HE~vH-Ag~a 125 (198)
+.|||+.+ |.-..+.. -...+.+|+.||+-| -|+.
T Consensus 95 g~~~fd~~e~w~~~~~~~-~g~~~~~~~~he~gh~lgl~ 132 (169)
T 1rm8_A 95 GDTHFDSDEPWTLGNPNH-DGNDLFLVAVHELGHALGLE 132 (169)
T ss_dssp TCEEEETTSCEESSCCSS-SSEEHHHHHHHHHHHHHTCC
T ss_pred ceEEEcCCCcceecCCCC-ccceeeeehhhhhhhhcCCC
Confidence 48999764 43322111 122367999999999 4664
No 24
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=21.87 E-value=36 Score=26.18 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=21.5
Q ss_pred CeEEEccc--ccccC-CchhhhHHHHHHHHHHHhh-cCCCCC
Q 041464 90 NGIHYGDD--FIQNI-PVDLIKQEFSGVMYHEMTH-ANYVPE 127 (198)
Q Consensus 90 ~~I~~S~~--~i~~~-~~d~~~~Ei~GVl~HE~vH-Ag~ap~ 127 (198)
+.|||+.+ |.... .+ ..+.+|+.||+-| -|+.-+
T Consensus 93 g~~~~d~~~~w~~~~~~g----~~~~~v~~HEiGHaLGL~H~ 130 (165)
T 1hv5_A 93 GDVHFDYDETWTIGDNQG----TDLLQVAAHEFGHVLGLQHT 130 (165)
T ss_dssp EEEEEETTSCEESSCSSS----EEHHHHHHHHHHHHTTCCCC
T ss_pred ccEEEccccceecCCccC----chhhhhHHHHhHhhhCCCCC
Confidence 48888754 32221 22 2367999999999 577533
No 25
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=21.71 E-value=41 Score=26.26 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=21.0
Q ss_pred CeEEEcccc--cccCCchhhhHHHHHHHHHHHhh-cCCC
Q 041464 90 NGIHYGDDF--IQNIPVDLIKQEFSGVMYHEMTH-ANYV 125 (198)
Q Consensus 90 ~~I~~S~~~--i~~~~~d~~~~Ei~GVl~HE~vH-Ag~a 125 (198)
+.|||+.+. ...... ...+.+|+.||+-| -|+.
T Consensus 95 g~i~fd~~e~w~~~~~~---g~~~~~~~~HE~gH~lGl~ 130 (174)
T 2y6d_A 95 GDAHFDEDERWTDGSSL---GINFLYAATHELGHSLGMG 130 (174)
T ss_dssp TCEEEETTSCEESSSSS---SEEHHHHHHHHHHHHHTBC
T ss_pred ceEEeccccccccCCCC---CceeeehhhHHhHhhhcCC
Confidence 588887653 322111 12367999999999 5774
No 26
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=21.43 E-value=39 Score=24.85 Aligned_cols=23 Identities=26% Similarity=0.340 Sum_probs=19.7
Q ss_pred hhHhHHHHHHhhcCCCHHHHHHH
Q 041464 144 SVAARFLDYCNDLRNGFVAELNK 166 (198)
Q Consensus 144 ~~TA~FL~wle~~~~gfV~~LN~ 166 (198)
.+.|-||.||.+++|++...|-.
T Consensus 62 eH~g~~l~~Lrr~dp~~~~~l~~ 84 (95)
T 1zpy_A 62 EHAAMLLEWIRRCDPAFDKELKD 84 (95)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHH
Confidence 68999999999999988877644
No 27
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=20.19 E-value=1.3e+02 Score=29.48 Aligned_cols=63 Identities=14% Similarity=0.114 Sum_probs=34.3
Q ss_pred HHHHHHhccCCCCCCCCCCeEEEEE-ccCCCCceeEecCCeEEEcccccccC---CchhhhHHHHHHHHHHHhh
Q 041464 52 NFIWRLFQQNTEADRKNIPQVDLFI-DDMKPGEIAFTSNNGIHYGDDFIQNI---PVDLIKQEFSGVMYHEMTH 121 (198)
Q Consensus 52 ~~i~~lf~y~~p~~rk~v~~Vtl~l-~d~~~~GVA~t~g~~I~~S~~~i~~~---~~d~~~~Ei~GVl~HE~vH 121 (198)
.+...+|..+- |..+..++. .++. .| |--.-+-|.|+..++-.- ..+.-+..+..|+.||++|
T Consensus 231 ~~~e~~fG~pY-----P~~k~d~Vavpdf~-~G-aMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAH 297 (867)
T 2gtq_A 231 KWDETRFGLEY-----DLDIFMVVAVGDFN-MG-AMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFH 297 (867)
T ss_dssp HHHHHHHCCCC-----CSSEEEEEEESSCS-SS-EECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCC-----CCcceeEEEcCCCC-cc-ccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHH
Confidence 56666663222 334555543 3431 12 222223566776666322 2333456788999999999
No 28
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=20.18 E-value=67 Score=20.66 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=16.8
Q ss_pred HHHHhhcCCCHHHHHHHHHhccCC
Q 041464 150 LDYCNDLRNGFVAELNKKMRDGYN 173 (198)
Q Consensus 150 L~wle~~~~gfV~~LN~~mr~~ys 173 (198)
|-||-+.+++||.+|.++--...+
T Consensus 18 l~hLiknD~~Fl~~iHeAYl~sl~ 41 (46)
T 2wx4_A 18 FTYLIQNDKEFANKLHKAYLNGCS 41 (46)
T ss_dssp HHHHHHHCTTHHHHHHHHHHC---
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHH
Confidence 456668899999999988655433
No 29
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=20.16 E-value=36 Score=29.85 Aligned_cols=10 Identities=40% Similarity=0.551 Sum_probs=9.4
Q ss_pred HHHHHHHHhh
Q 041464 112 SGVMYHEMTH 121 (198)
Q Consensus 112 ~GVl~HE~vH 121 (198)
.+|+.|||+|
T Consensus 136 lDVv~HE~tH 145 (306)
T 3nqx_A 136 LDVSAHEVSH 145 (306)
T ss_dssp HHHHHHHHHH
T ss_pred cchhhhhhcc
Confidence 5999999999
Done!