BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041465
         (216 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LVN2|Y5815_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase
           At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1
          Length = 785

 Score = 32.7 bits (73), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)

Query: 31  QHFFGSLRELEIAEDNSACFPIWNVLERFHNLEKLILVCFSFNEEVFSEEGCLEKHVGKL 90
           +H + SL  L+++ DNS    I+N L   H L  L L C  F  + F E       +GKL
Sbjct: 256 KHNWSSLIHLDLS-DNSFVGHIFNGLSSAHKLGHLNLACNRFRAQEFPE-------IGKL 307

Query: 91  AMIKTLELNR 100
           + +  L L+R
Sbjct: 308 SALHYLNLSR 317


>sp|Q9V496|APLP_DROME Apolipophorins OS=Drosophila melanogaster GN=Rfabg PE=1 SV=2
          Length = 3351

 Score = 31.6 bits (70), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 144  RNLTKLVAFGCKKLLHMVTSSTAKTLVQLVTVSICGC 180
            +N  KL A   KK+L+ +TSS A TL +   VS C C
Sbjct: 3287 QNFEKLKASDQKKMLNQITSSLADTLFKTEIVSDCRC 3323


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.138    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,431,298
Number of Sequences: 539616
Number of extensions: 2718455
Number of successful extensions: 6042
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6037
Number of HSP's gapped (non-prelim): 13
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)